ORF_ID e_value Gene_name EC_number CAZy COGs Description
BEEBGOEM_00001 1.3e-257 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BEEBGOEM_00002 6.3e-202 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
BEEBGOEM_00003 1.1e-29 yyzM S Protein conserved in bacteria
BEEBGOEM_00004 1.1e-203 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
BEEBGOEM_00005 1.4e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
BEEBGOEM_00006 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BEEBGOEM_00007 1.7e-39 yabO J Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
BEEBGOEM_00008 2.7e-61 divIC D Septum formation initiator
BEEBGOEM_00010 1.3e-240 XK27_09285 3.5.2.6 V Beta-lactamase enzyme family
BEEBGOEM_00011 5e-240 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
BEEBGOEM_00012 3.4e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
BEEBGOEM_00013 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BEEBGOEM_00014 1.3e-137 L Transposase
BEEBGOEM_00015 1.1e-92 L Transposase
BEEBGOEM_00016 1.6e-55 L transposition
BEEBGOEM_00017 1.9e-86 L Integrase core domain protein
BEEBGOEM_00030 5.3e-11
BEEBGOEM_00036 5.5e-139 mreC M Involved in formation and maintenance of cell shape
BEEBGOEM_00037 6.3e-88 mreD M Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
BEEBGOEM_00038 1.7e-90 usp 3.5.1.28 CBM50 S CHAP domain
BEEBGOEM_00039 1.2e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BEEBGOEM_00040 2.9e-218 araT 2.6.1.1 E Aminotransferase
BEEBGOEM_00041 1e-142 recO L Involved in DNA repair and RecF pathway recombination
BEEBGOEM_00042 1.3e-179 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
BEEBGOEM_00043 4.2e-34 acpP1 IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
BEEBGOEM_00044 2e-129 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
BEEBGOEM_00045 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BEEBGOEM_00046 1.3e-276 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BEEBGOEM_00047 1.8e-184 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
BEEBGOEM_00048 1.4e-101 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BEEBGOEM_00049 1.2e-293 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
BEEBGOEM_00050 4.8e-76 L transposase activity
BEEBGOEM_00051 1.4e-48 L transposition
BEEBGOEM_00052 1.4e-33 L Integrase core domain protein
BEEBGOEM_00053 2.3e-161 S CHAP domain
BEEBGOEM_00054 3.4e-241 purD 6.3.4.13 F Belongs to the GARS family
BEEBGOEM_00055 4.9e-76 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BEEBGOEM_00056 2.2e-204 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BEEBGOEM_00057 9.2e-141 1.1.1.169 H Ketopantoate reductase
BEEBGOEM_00058 8.7e-248 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BEEBGOEM_00059 0.0 argS 6.1.1.19 J Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
BEEBGOEM_00060 2.6e-09 L Transposase
BEEBGOEM_00061 8.2e-70 argR K Regulates arginine biosynthesis genes
BEEBGOEM_00062 1e-57 ymcA 3.6.3.21 S Belongs to the UPF0342 family
BEEBGOEM_00063 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BEEBGOEM_00064 7e-34 S Protein of unknown function (DUF3021)
BEEBGOEM_00065 1.2e-61 KT phosphorelay signal transduction system
BEEBGOEM_00067 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BEEBGOEM_00069 1.2e-165 L integrase core domain
BEEBGOEM_00070 3.9e-122 L Transposase
BEEBGOEM_00071 7.8e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
BEEBGOEM_00072 6.4e-107 tag 3.2.2.20 L 3-methyladenine DNA glycosylase
BEEBGOEM_00073 1e-232 cinA 3.5.1.42 S Belongs to the CinA family
BEEBGOEM_00074 2e-195 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BEEBGOEM_00075 1.1e-65 spxA_2 1.20.4.1 P Belongs to the ArsC family
BEEBGOEM_00081 2.6e-10
BEEBGOEM_00084 1.9e-07
BEEBGOEM_00089 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BEEBGOEM_00090 5.7e-222 pepS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
BEEBGOEM_00091 5.5e-36 XK27_02060 S Transglycosylase associated protein
BEEBGOEM_00092 1.8e-26 badR K DNA-binding transcription factor activity
BEEBGOEM_00093 1.7e-96 S reductase
BEEBGOEM_00094 1e-87 L Integrase core domain protein
BEEBGOEM_00095 3.2e-40 L transposition
BEEBGOEM_00096 7.3e-22 yocD 3.4.17.13 V carboxypeptidase activity
BEEBGOEM_00097 1.9e-86 yocD 3.4.17.13 V proteins, homologs of microcin C7 resistance protein MccF
BEEBGOEM_00100 6.3e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
BEEBGOEM_00101 1.7e-182 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BEEBGOEM_00102 1.1e-83 S Putative small multi-drug export protein
BEEBGOEM_00103 2.4e-75 ctsR K Belongs to the CtsR family
BEEBGOEM_00104 0.0 clpC O Belongs to the ClpA ClpB family
BEEBGOEM_00105 7e-127 dacA 3.4.16.4 M Belongs to the peptidase S11 family
BEEBGOEM_00106 4.4e-53 dacA 3.4.16.4 M Belongs to the peptidase S11 family
BEEBGOEM_00107 1.2e-230 dacA 3.4.16.4 M Belongs to the peptidase S11 family
BEEBGOEM_00108 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
BEEBGOEM_00109 4.5e-143 S SseB protein N-terminal domain
BEEBGOEM_00110 1.1e-112 cysE 2.3.1.30 E serine acetyltransferase
BEEBGOEM_00111 1.7e-259 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
BEEBGOEM_00112 4.2e-68 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
BEEBGOEM_00115 5.7e-135 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BEEBGOEM_00116 3.5e-91 yacP S RNA-binding protein containing a PIN domain
BEEBGOEM_00117 3.4e-155 degV S DegV family
BEEBGOEM_00119 2.3e-31 K helix-turn-helix
BEEBGOEM_00120 1.6e-94 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BEEBGOEM_00121 3.6e-57 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BEEBGOEM_00122 2e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BEEBGOEM_00123 9.5e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
BEEBGOEM_00124 1.5e-35 K sequence-specific DNA binding
BEEBGOEM_00126 0.0 S Lantibiotic dehydratase, C terminus
BEEBGOEM_00127 2.4e-231 spaC2 V Lanthionine synthetase C family protein
BEEBGOEM_00128 2.5e-183 EGP Major facilitator Superfamily
BEEBGOEM_00129 5.9e-24 3.6.4.12
BEEBGOEM_00130 6.5e-90 3.6.4.12 K Divergent AAA domain protein
BEEBGOEM_00131 9.3e-184 L Phage integrase family
BEEBGOEM_00132 1.7e-22
BEEBGOEM_00133 1.3e-154
BEEBGOEM_00135 1.3e-134 D ftsk spoiiie
BEEBGOEM_00136 5.3e-18 D FtsK/SpoIIIE family
BEEBGOEM_00139 9.7e-227 sthIM 2.1.1.72 L DNA methylase
BEEBGOEM_00140 0.0 res_1 3.1.21.5 S Type III restriction
BEEBGOEM_00142 2.2e-224 int L Belongs to the 'phage' integrase family
BEEBGOEM_00143 1.8e-38 S Helix-turn-helix domain
BEEBGOEM_00144 4.9e-173
BEEBGOEM_00146 3.4e-75 isp2 S pathogenesis
BEEBGOEM_00147 5.7e-91 tnp L Transposase
BEEBGOEM_00148 3.3e-225 capA M Bacterial capsule synthesis protein
BEEBGOEM_00149 3.6e-39 gcvR T UPF0237 protein
BEEBGOEM_00150 1.9e-242 XK27_08635 S UPF0210 protein
BEEBGOEM_00151 2.2e-38 ais G alpha-ribazole phosphatase activity
BEEBGOEM_00152 1.6e-143 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
BEEBGOEM_00153 1.3e-102 acmA 3.2.1.17 NU amidase activity
BEEBGOEM_00154 5.3e-198 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
BEEBGOEM_00155 1.3e-71 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BEEBGOEM_00156 9.8e-298 dnaK O Heat shock 70 kDa protein
BEEBGOEM_00157 4.2e-190 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
BEEBGOEM_00158 2.5e-138 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
BEEBGOEM_00159 6.2e-137 thiD 2.7.1.35, 2.7.1.49, 2.7.4.7 H phosphomethylpyrimidine kinase
BEEBGOEM_00160 1.7e-60 hmpT S membrane
BEEBGOEM_00171 2.6e-12
BEEBGOEM_00174 0.0 amiA E ABC transporter, substrate-binding protein, family 5
BEEBGOEM_00175 2.5e-169 L Transposase
BEEBGOEM_00176 9.9e-19 S Domain of unknown function (DUF4649)
BEEBGOEM_00177 1.8e-56 amd 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
BEEBGOEM_00178 1.5e-233 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
BEEBGOEM_00179 6.5e-87
BEEBGOEM_00180 1.6e-77 sigH K DNA-templated transcription, initiation
BEEBGOEM_00181 4.6e-149 ykuT M mechanosensitive ion channel
BEEBGOEM_00182 6.4e-219 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
BEEBGOEM_00183 4.8e-73 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
BEEBGOEM_00184 7.6e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
BEEBGOEM_00185 1.1e-83 XK27_03960 S Protein of unknown function (DUF3013)
BEEBGOEM_00186 3.7e-81 mutT3 3.6.1.13, 3.6.1.55 L NUDIX domain
BEEBGOEM_00187 2e-177 prmA J Ribosomal protein L11 methyltransferase
BEEBGOEM_00188 4.4e-135 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
BEEBGOEM_00189 1.4e-42 F nucleotide catabolic process
BEEBGOEM_00190 5.4e-139 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
BEEBGOEM_00191 6.3e-186 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
BEEBGOEM_00192 3.8e-81 nrdI F Belongs to the NrdI family
BEEBGOEM_00193 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BEEBGOEM_00194 3.3e-74 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
BEEBGOEM_00195 1.4e-09 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
BEEBGOEM_00196 2e-27 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
BEEBGOEM_00197 2.1e-58 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
BEEBGOEM_00198 3.9e-46 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
BEEBGOEM_00199 1.7e-237 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BEEBGOEM_00200 3.3e-112 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
BEEBGOEM_00201 5.3e-113 fnr5 K Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
BEEBGOEM_00202 6.5e-202 yhjX P Major Facilitator
BEEBGOEM_00203 9.2e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BEEBGOEM_00204 5e-94 V VanZ like family
BEEBGOEM_00205 1e-123 glnQ E abc transporter atp-binding protein
BEEBGOEM_00206 5.8e-275 glnP P ABC transporter
BEEBGOEM_00207 3.1e-153 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
BEEBGOEM_00208 5.2e-136 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
BEEBGOEM_00209 5.5e-185 tagO 2.7.8.33, 2.7.8.35 M transferase
BEEBGOEM_00210 9.5e-144 sufC O ABC-type transport system involved in Fe-S cluster assembly, ATPase component
BEEBGOEM_00211 6.3e-235 sufD O assembly protein SufD
BEEBGOEM_00212 7.7e-238 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BEEBGOEM_00213 2.5e-74 nifU C SUF system FeS assembly protein, NifU family
BEEBGOEM_00214 2.2e-273 sufB O assembly protein SufB
BEEBGOEM_00215 7e-10 oppA E ABC transporter substrate-binding protein
BEEBGOEM_00216 2e-138 oppA E ABC transporter substrate-binding protein
BEEBGOEM_00217 4.2e-27 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
BEEBGOEM_00218 6.6e-11 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
BEEBGOEM_00219 1.7e-33 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
BEEBGOEM_00220 1.4e-38 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
BEEBGOEM_00221 3e-27 oppD P Belongs to the ABC transporter superfamily
BEEBGOEM_00222 2.5e-32 oppD P Belongs to the ABC transporter superfamily
BEEBGOEM_00223 1.2e-62 oppD P Belongs to the ABC transporter superfamily
BEEBGOEM_00224 2.7e-41 oppD P Belongs to the ABC transporter superfamily
BEEBGOEM_00225 7.5e-62 oppF P Belongs to the ABC transporter superfamily
BEEBGOEM_00226 3.4e-62 oppF P Belongs to the ABC transporter superfamily
BEEBGOEM_00227 6.4e-23
BEEBGOEM_00228 2.1e-157 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BEEBGOEM_00229 7.4e-183 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BEEBGOEM_00230 9.4e-223 EGP Major facilitator Superfamily
BEEBGOEM_00231 3.1e-72 adcR K transcriptional
BEEBGOEM_00232 8.3e-136 adcC P ABC transporter, ATP-binding protein
BEEBGOEM_00233 1.6e-127 adcB P ABC transporter (Permease
BEEBGOEM_00234 1.4e-162 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
BEEBGOEM_00235 5.6e-65 ptsG 2.7.1.199, 2.7.1.208 G pts system
BEEBGOEM_00236 2.1e-150 ptsG 2.7.1.199, 2.7.1.208, 2.7.1.211 G pts system
BEEBGOEM_00237 4.8e-106 ptsG 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
BEEBGOEM_00238 6.6e-150 rgfB 3.1.3.90 L endonuclease exonuclease phosphatase family protein
BEEBGOEM_00239 1.1e-256 pgi 5.3.1.9 G Belongs to the GPI family
BEEBGOEM_00240 1.9e-127 yeeN K transcriptional regulatory protein
BEEBGOEM_00241 9.8e-50 yajC U protein transport
BEEBGOEM_00242 1.1e-141 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BEEBGOEM_00243 2.2e-145 cdsA 2.7.7.41 S Belongs to the CDS family
BEEBGOEM_00244 1.4e-231 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
BEEBGOEM_00245 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
BEEBGOEM_00246 0.0 WQ51_06230 S ABC transporter substrate binding protein
BEEBGOEM_00247 5.2e-142 cmpC S abc transporter atp-binding protein
BEEBGOEM_00248 1.3e-42 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BEEBGOEM_00249 4.1e-287 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
BEEBGOEM_00250 4.4e-37 L Transposase
BEEBGOEM_00251 3.2e-10 L transposase activity
BEEBGOEM_00252 1.7e-51 L transposition
BEEBGOEM_00253 1.4e-33 L Integrase core domain protein
BEEBGOEM_00255 4.7e-43
BEEBGOEM_00256 6.8e-56 S TM2 domain
BEEBGOEM_00257 1.2e-165 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
BEEBGOEM_00258 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
BEEBGOEM_00259 3.3e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
BEEBGOEM_00260 5.7e-25 secE U Belongs to the SecE SEC61-gamma family
BEEBGOEM_00261 8.4e-96 nusG K Participates in transcription elongation, termination and antitermination
BEEBGOEM_00262 4.6e-85 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I phosphatidate phosphatase activity
BEEBGOEM_00263 6e-55 cof Q phosphatase activity
BEEBGOEM_00264 6.2e-35 cof Q phosphatase activity
BEEBGOEM_00265 1.6e-137 glcR K transcriptional regulator (DeoR family)
BEEBGOEM_00266 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
BEEBGOEM_00268 3.8e-40 K transcriptional
BEEBGOEM_00270 2.6e-76 S thiolester hydrolase activity
BEEBGOEM_00271 1e-139 S COG1073 Hydrolases of the alpha beta superfamily
BEEBGOEM_00272 1.3e-279 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BEEBGOEM_00273 2.1e-151 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
BEEBGOEM_00274 1.9e-77 yhaI L Membrane
BEEBGOEM_00275 5.1e-259 pepC 3.4.22.40 E aminopeptidase
BEEBGOEM_00276 1.6e-249 L Transposase
BEEBGOEM_00277 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
BEEBGOEM_00278 2.5e-109 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
BEEBGOEM_00279 8.9e-95 ypsA S Belongs to the UPF0398 family
BEEBGOEM_00280 5.6e-50 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
BEEBGOEM_00281 1.5e-222 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
BEEBGOEM_00282 2.5e-296 mapZ D Early cell division protein that marks the future cell division site and supports proper FtsZ ring positioning
BEEBGOEM_00283 0.0 snf 2.7.11.1 L Superfamily II DNA RNA helicases, SNF2 family'
BEEBGOEM_00284 2.5e-23
BEEBGOEM_00285 5.7e-255 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
BEEBGOEM_00286 2.1e-82 XK27_09675 K -acetyltransferase
BEEBGOEM_00287 0.0 mltG ADL Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BEEBGOEM_00288 1.6e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
BEEBGOEM_00289 5.2e-59 L Integrase core domain protein
BEEBGOEM_00290 8.5e-165 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BEEBGOEM_00291 7e-46 acyP 3.6.1.7 C Belongs to the acylphosphatase family
BEEBGOEM_00292 6.4e-131 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BEEBGOEM_00293 6.1e-93 XK27_09705 6.1.1.14 S HD superfamily hydrolase
BEEBGOEM_00294 8.8e-98 ybhL S Belongs to the BI1 family
BEEBGOEM_00297 9.6e-244 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
BEEBGOEM_00298 3.7e-91 K transcriptional regulator
BEEBGOEM_00299 7.6e-36 yneF S UPF0154 protein
BEEBGOEM_00300 3.8e-148 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
BEEBGOEM_00301 7.1e-186 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BEEBGOEM_00302 3.5e-99 XK27_09740 S Phosphoesterase
BEEBGOEM_00303 7.8e-85 ykuL S CBS domain
BEEBGOEM_00304 4.5e-135 xerD L tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site
BEEBGOEM_00305 3.8e-120 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BEEBGOEM_00306 3e-99 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BEEBGOEM_00307 6.1e-140 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
BEEBGOEM_00308 1.2e-39 yidD S Could be involved in insertion of integral membrane proteins into the membrane
BEEBGOEM_00309 1.2e-258 trkH P Cation transport protein
BEEBGOEM_00310 1.3e-246 trkA P Potassium transporter peripheral membrane component
BEEBGOEM_00311 7.9e-96 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
BEEBGOEM_00312 3.2e-90 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BEEBGOEM_00313 4.8e-114 bcrC 3.6.1.27 I Membrane-associated phospholipid phosphatase
BEEBGOEM_00314 5.6e-161 K sequence-specific DNA binding
BEEBGOEM_00315 1.2e-32 V protein secretion by the type I secretion system
BEEBGOEM_00316 7.4e-36 V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
BEEBGOEM_00317 1.2e-54 V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
BEEBGOEM_00318 1.8e-34 V protein secretion by the type I secretion system
BEEBGOEM_00319 2.3e-129 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
BEEBGOEM_00320 1.8e-50 yhaI L Membrane
BEEBGOEM_00321 5e-84 S Domain of unknown function (DUF4173)
BEEBGOEM_00322 6.8e-95 ureI S AmiS/UreI family transporter
BEEBGOEM_00323 7.6e-46 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
BEEBGOEM_00324 7.8e-54 ureB 3.5.1.5 E Belongs to the urease beta subunit family
BEEBGOEM_00325 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
BEEBGOEM_00326 6.6e-78 ureE O enzyme active site formation
BEEBGOEM_00327 5.3e-130 ureF O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
BEEBGOEM_00328 9.5e-112 ureG KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
BEEBGOEM_00329 3.4e-160 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
BEEBGOEM_00330 4.3e-175 cbiM P PDGLE domain
BEEBGOEM_00331 1.1e-136 P cobalt transport protein
BEEBGOEM_00332 1.6e-131 cbiO P ABC transporter
BEEBGOEM_00333 5.3e-153 ET amino acid transport
BEEBGOEM_00334 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BEEBGOEM_00335 0.0 3.3.1.1, 3.6.1.55, 3.6.1.67 F NUDIX domain
BEEBGOEM_00336 3.8e-205 EGP Transmembrane secretion effector
BEEBGOEM_00337 1.8e-153 ET amino acid transport
BEEBGOEM_00338 7.1e-164 metQ M Belongs to the NlpA lipoprotein family
BEEBGOEM_00339 4.9e-87 dapE 3.5.1.18 E COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases
BEEBGOEM_00340 1.2e-61 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase activity
BEEBGOEM_00341 1.4e-62 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase activity
BEEBGOEM_00342 1.2e-189 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BEEBGOEM_00343 5.2e-98 metI P ABC transporter (Permease
BEEBGOEM_00344 3.9e-210 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
BEEBGOEM_00345 5.5e-158 salL 2.5.1.63, 2.5.1.94 S S-adenosyl-l-methionine hydroxide adenosyltransferase
BEEBGOEM_00346 8e-94 S UPF0397 protein
BEEBGOEM_00347 0.0 ykoD P abc transporter atp-binding protein
BEEBGOEM_00348 1.2e-146 cbiQ P cobalt transport
BEEBGOEM_00349 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BEEBGOEM_00350 1.4e-11 ulaG S L-ascorbate 6-phosphate lactonase
BEEBGOEM_00351 1.4e-121 ktrA P COG0569 K transport systems, NAD-binding component
BEEBGOEM_00352 1.4e-243 P COG0168 Trk-type K transport systems, membrane components
BEEBGOEM_00353 1.1e-130 rsmG 2.1.1.170 J Ribosomal RNA small subunit methyltransferase G
BEEBGOEM_00354 2.1e-91 yceD K metal-binding, possibly nucleic acid-binding protein
BEEBGOEM_00355 1.8e-122 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
BEEBGOEM_00356 3.3e-275 T PhoQ Sensor
BEEBGOEM_00357 2.8e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BEEBGOEM_00358 5e-218 dnaB L Replication initiation and membrane attachment
BEEBGOEM_00359 4e-167 dnaI L Primosomal protein DnaI
BEEBGOEM_00360 1.3e-246 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
BEEBGOEM_00361 9e-88 yrdC 3.5.1.19 Q isochorismatase
BEEBGOEM_00362 3.4e-80 L PFAM Integrase catalytic region
BEEBGOEM_00363 1.7e-54 L transposition
BEEBGOEM_00364 5e-23 L Transposase
BEEBGOEM_00365 2.3e-32 L transposase activity
BEEBGOEM_00366 7.6e-55 L Transposase
BEEBGOEM_00367 6.9e-150 L Transposase
BEEBGOEM_00369 4.3e-41 L Protein of unknown function (DUF3991)
BEEBGOEM_00370 2.8e-160 L Transposase DDE domain
BEEBGOEM_00371 9.5e-17 lytN 3.5.1.104 M LysM domain
BEEBGOEM_00372 1.3e-125 tnp L DDE domain
BEEBGOEM_00373 2.1e-12 G gluconolactonase activity
BEEBGOEM_00374 0.0 M domain protein
BEEBGOEM_00375 1.4e-36 L Integrase core domain
BEEBGOEM_00376 2.6e-94 L Integrase core domain
BEEBGOEM_00377 1.3e-221 L Transposase
BEEBGOEM_00378 8e-230 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
BEEBGOEM_00379 4.2e-62 manO S protein conserved in bacteria
BEEBGOEM_00380 1.1e-169 manN G PTS system mannose fructose sorbose family IID component
BEEBGOEM_00381 5e-108 manM G pts system
BEEBGOEM_00382 1.1e-181 manL 2.7.1.191 G pts system
BEEBGOEM_00383 1.5e-140 XK27_00940 1.2.1.70, 3.5.1.9 S Metal-dependent hydrolase
BEEBGOEM_00384 1e-153 yitU 3.1.3.104 S hydrolases of the HAD superfamily
BEEBGOEM_00385 2.5e-248 pbuO S permease
BEEBGOEM_00386 1.4e-77 ydiB 2.7.1.221, 5.1.1.1 M ATPase or kinase
BEEBGOEM_00387 2.4e-92 XK27_05885 2.3.1.82 M Acetyltransferase GNAT Family
BEEBGOEM_00388 2.5e-220 brpA K Transcriptional
BEEBGOEM_00389 3.9e-81 rimP S Required for maturation of 30S ribosomal subunits
BEEBGOEM_00390 3.1e-212 nusA K Participates in both transcription termination and antitermination
BEEBGOEM_00391 1e-47 ylxR K Nucleic-acid-binding protein implicated in transcription termination
BEEBGOEM_00392 2e-46 ylxQ J ribosomal protein
BEEBGOEM_00393 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BEEBGOEM_00394 1.7e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BEEBGOEM_00395 2e-22 yvdD 3.2.2.10 S Belongs to the LOG family
BEEBGOEM_00396 1.5e-25 yvdD 3.2.2.10 S cytokinin biosynthetic process
BEEBGOEM_00397 3.6e-48 femA 2.3.2.10, 2.3.2.16, 2.3.2.17, 2.3.2.18 V protein involved in methicillin resistance
BEEBGOEM_00398 6e-157 femA 2.3.2.10, 2.3.2.16, 2.3.2.17, 2.3.2.18 V protein involved in methicillin resistance
BEEBGOEM_00399 4.9e-276 murE 6.3.2.13, 6.3.2.7 M to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BEEBGOEM_00400 4.5e-283 ytgP S Membrane protein involved in the export of O-antigen and teichoic acid
BEEBGOEM_00401 3.3e-96 pacL 3.6.3.8, 3.6.3.9 P cation transport ATPase
BEEBGOEM_00402 4.7e-202 metB 2.5.1.48, 4.4.1.8 E cystathionine
BEEBGOEM_00403 1e-223 malY 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
BEEBGOEM_00405 4.4e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BEEBGOEM_00406 2.9e-105 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
BEEBGOEM_00407 1.2e-74 ylbF S Belongs to the UPF0342 family
BEEBGOEM_00408 7.1e-46 ylbG S UPF0298 protein
BEEBGOEM_00409 1.3e-210 livJ E COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component
BEEBGOEM_00410 1.9e-145 livH E Belongs to the binding-protein-dependent transport system permease family
BEEBGOEM_00411 1.4e-138 livM E Belongs to the binding-protein-dependent transport system permease family
BEEBGOEM_00412 9.6e-138 livG E COG0411 ABC-type branched-chain amino acid transport systems, ATPase component
BEEBGOEM_00413 4.8e-123 livF E COG0410 ABC-type branched-chain amino acid transport systems, ATPase component
BEEBGOEM_00414 6.8e-69 acuB S IMP dehydrogenase activity
BEEBGOEM_00415 8.9e-41 acuB S IMP dehydrogenase activity
BEEBGOEM_00416 3.7e-168 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
BEEBGOEM_00417 1.1e-110 yvyE 3.4.13.9 S YigZ family
BEEBGOEM_00418 5.9e-252 comFA L Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
BEEBGOEM_00419 1.7e-122 comFC S Competence protein
BEEBGOEM_00420 2.1e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BEEBGOEM_00428 3.5e-166 ppaC 3.6.1.1 C inorganic pyrophosphatase
BEEBGOEM_00429 6.4e-108 S Domain of unknown function (DUF1803)
BEEBGOEM_00430 1.3e-101 ygaC J Belongs to the UPF0374 family
BEEBGOEM_00431 1.2e-130 recX 2.4.1.337 GT4 S Regulatory protein RecX
BEEBGOEM_00432 6.7e-259 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BEEBGOEM_00433 8e-193 asnA 6.3.1.1 E aspartate--ammonia ligase
BEEBGOEM_00434 2.4e-256 lysC 2.7.2.4 E Belongs to the aspartokinase family
BEEBGOEM_00435 1.6e-114 S Haloacid dehalogenase-like hydrolase
BEEBGOEM_00436 6.9e-139 phaB 5.3.3.14, 5.3.3.18 I Belongs to the enoyl-CoA hydratase isomerase family
BEEBGOEM_00437 4e-72 marR K Transcriptional regulator, MarR family
BEEBGOEM_00438 2.3e-173 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BEEBGOEM_00439 3.3e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
BEEBGOEM_00440 1.2e-172 fabK 1.3.1.9 S 2-Nitropropane dioxygenase
BEEBGOEM_00441 8.5e-165 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
BEEBGOEM_00442 1.6e-126 IQ reductase
BEEBGOEM_00443 2.6e-233 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
BEEBGOEM_00444 7.7e-56 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
BEEBGOEM_00445 1.5e-71 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
BEEBGOEM_00446 1.7e-257 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
BEEBGOEM_00447 1.6e-160 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BEEBGOEM_00448 1.1e-138 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
BEEBGOEM_00449 4.7e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
BEEBGOEM_00450 1.1e-65 tnp L Transposase
BEEBGOEM_00451 2.3e-214 gadB 4.1.1.15 E Belongs to the group II decarboxylase family
BEEBGOEM_00452 9.8e-176 gadC E Psort location CytoplasmicMembrane, score 10.00
BEEBGOEM_00453 4.7e-27 L Transposase and inactivated derivatives, TnpA family
BEEBGOEM_00454 1.1e-65 tnp L Transposase
BEEBGOEM_00456 2.7e-82 S Protein of unknown function (DUF3114)
BEEBGOEM_00457 1.1e-176 S Protein of unknown function (DUF3114)
BEEBGOEM_00458 1.7e-51 2.3.1.128 K Acetyltransferase GNAT Family
BEEBGOEM_00459 7.7e-198 V (ABC) transporter
BEEBGOEM_00460 1.4e-74 C Arylsulfatase regulator (Fe-S oxidoreductase)
BEEBGOEM_00461 6.4e-85 C Arylsulfatase regulator (Fe-S oxidoreductase)
BEEBGOEM_00462 1.1e-113 K sequence-specific DNA binding
BEEBGOEM_00463 8.4e-155 L COG2801 Transposase and inactivated derivatives
BEEBGOEM_00464 6.6e-38 L transposase activity
BEEBGOEM_00465 1.3e-205 rny D Endoribonuclease that initiates mRNA decay
BEEBGOEM_00466 8.9e-84 L Transposase
BEEBGOEM_00467 5.5e-122 fruR K transcriptional
BEEBGOEM_00468 3.8e-165 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
BEEBGOEM_00469 0.0 fruA 2.7.1.202 G phosphotransferase system
BEEBGOEM_00470 2.7e-260 gor 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BEEBGOEM_00471 2.6e-241 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
BEEBGOEM_00473 6.1e-213 iscS2 2.8.1.7 E Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes
BEEBGOEM_00474 6.5e-229 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BEEBGOEM_00475 4.9e-295 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
BEEBGOEM_00476 7.2e-258 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
BEEBGOEM_00477 6.4e-29 2.3.1.128 K acetyltransferase
BEEBGOEM_00478 4.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
BEEBGOEM_00479 1.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
BEEBGOEM_00480 7.7e-134 ydaF_2 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BEEBGOEM_00481 2.6e-64 WQ51_03320 S cog cog4835
BEEBGOEM_00482 9.8e-91 XK27_08360 S EDD domain protein, DegV family
BEEBGOEM_00483 3e-139 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
BEEBGOEM_00484 9.6e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
BEEBGOEM_00485 0.0 yfmR S abc transporter atp-binding protein
BEEBGOEM_00486 7.2e-25 U response to pH
BEEBGOEM_00487 6.5e-77 3.6.1.13, 3.6.1.55 F AdP-ribose pyrophosphatase
BEEBGOEM_00488 1.7e-212 nadD 2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55 H adenylyltransferase
BEEBGOEM_00489 1.8e-256 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
BEEBGOEM_00490 1e-69 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
BEEBGOEM_00491 1.9e-77 K DNA-binding transcription factor activity
BEEBGOEM_00492 0.0 lmrA1 V abc transporter atp-binding protein
BEEBGOEM_00493 0.0 lmrA2 V abc transporter atp-binding protein
BEEBGOEM_00494 1.4e-45 K Acetyltransferase (GNAT) family
BEEBGOEM_00495 1.3e-120 sptS 2.7.13.3 T Histidine kinase
BEEBGOEM_00496 4.9e-131 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
BEEBGOEM_00497 9.9e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
BEEBGOEM_00498 1.7e-159 cvfB S Protein conserved in bacteria
BEEBGOEM_00499 7.4e-35 yozE S Belongs to the UPF0346 family
BEEBGOEM_00500 1.5e-123 usp 3.5.1.104, 3.5.1.28 CBM50 S pathogenesis
BEEBGOEM_00501 2.3e-61 rlpA M LysM domain protein
BEEBGOEM_00502 8e-191 phoH T phosphate starvation-inducible protein PhoH
BEEBGOEM_00506 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BEEBGOEM_00507 1.8e-164 K transcriptional regulator (lysR family)
BEEBGOEM_00508 1.4e-186 coiA 3.6.4.12 S Competence protein
BEEBGOEM_00509 0.0 pepF E oligoendopeptidase F
BEEBGOEM_00510 5.4e-127 yrrM 2.1.1.104 S O-Methyltransferase
BEEBGOEM_00511 1.3e-167 prsA 3.1.3.16, 5.2.1.8 O peptidyl-prolyl cis-trans isomerase activity
BEEBGOEM_00512 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BEEBGOEM_00513 7.9e-24 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
BEEBGOEM_00514 6.9e-179 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
BEEBGOEM_00515 3.9e-120 3.4.17.14, 3.5.1.28 NU amidase activity
BEEBGOEM_00516 4.9e-145 cnhA 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
BEEBGOEM_00517 1.7e-226 mtnE 2.6.1.83 E mutations do not affect methionine salvage in vivo however
BEEBGOEM_00518 1.4e-189 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BEEBGOEM_00519 1.5e-222 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
BEEBGOEM_00520 7.9e-129 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
BEEBGOEM_00521 1.4e-209 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
BEEBGOEM_00522 2.2e-130 yxkH G deacetylase
BEEBGOEM_00523 2.3e-237 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
BEEBGOEM_00524 6.3e-154 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
BEEBGOEM_00525 1.4e-151 rarD S Transporter
BEEBGOEM_00526 2.9e-15 T peptidase
BEEBGOEM_00527 8.9e-14 coiA 3.6.4.12 S Competence protein
BEEBGOEM_00528 8e-51 S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BEEBGOEM_00529 5.9e-54 2.3.1.128, 5.2.1.8 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BEEBGOEM_00530 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
BEEBGOEM_00531 1.1e-250 L Transposase
BEEBGOEM_00532 3.2e-16 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BEEBGOEM_00533 2.4e-114 atpB C it plays a direct role in the translocation of protons across the membrane
BEEBGOEM_00534 3.3e-78 atpF C ATP synthase F(0) sector subunit b
BEEBGOEM_00535 3.5e-86 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BEEBGOEM_00536 3.8e-279 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BEEBGOEM_00537 2.5e-158 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BEEBGOEM_00538 2.7e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BEEBGOEM_00539 5.2e-67 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
BEEBGOEM_00540 2.8e-230 ftsW D Belongs to the SEDS family
BEEBGOEM_00541 9.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BEEBGOEM_00542 1.4e-136 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
BEEBGOEM_00543 1.7e-111 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BEEBGOEM_00544 6.4e-162 holB 2.7.7.7 L dna polymerase iii
BEEBGOEM_00545 1.2e-135 yaaT S stage 0 sporulation protein
BEEBGOEM_00546 9.5e-55 yabA L Involved in initiation control of chromosome replication
BEEBGOEM_00547 4.6e-160 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BEEBGOEM_00548 2.9e-232 amt P Ammonium Transporter
BEEBGOEM_00549 1.2e-52 glnB K Belongs to the P(II) protein family
BEEBGOEM_00550 9.2e-105 mur1 NU mannosyl-glycoprotein
BEEBGOEM_00551 2.9e-148 XK27_04800 S Sucrose-6F-phosphate phosphohydrolase
BEEBGOEM_00552 1.5e-114 nptA P COG1283 Na phosphate symporter
BEEBGOEM_00553 4e-220 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
BEEBGOEM_00554 7.4e-55
BEEBGOEM_00555 4.4e-26
BEEBGOEM_00556 1.2e-61
BEEBGOEM_00557 1.7e-32 S membrane
BEEBGOEM_00558 4.8e-176 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
BEEBGOEM_00559 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
BEEBGOEM_00560 4.5e-39 ynzC S UPF0291 protein
BEEBGOEM_00561 1.8e-254 cycA E permease
BEEBGOEM_00562 2.4e-09 uvrX 2.7.7.7 L impB/mucB/samB family
BEEBGOEM_00563 4.8e-24 pts33BCA G pts system
BEEBGOEM_00564 5.8e-71 pts33BCA G pts system
BEEBGOEM_00565 9.4e-119 pts33BCA G pts system
BEEBGOEM_00566 1.4e-75 2.7.1.199, 2.7.1.211 G PTS glucose transporter subunit IIA
BEEBGOEM_00567 3.2e-141 ppiA 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BEEBGOEM_00573 1.4e-167 fhuR K transcriptional regulator (lysR family)
BEEBGOEM_00574 1.5e-77 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BEEBGOEM_00575 2.9e-162 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
BEEBGOEM_00576 3.7e-88 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
BEEBGOEM_00577 3.7e-227 pyrP F uracil Permease
BEEBGOEM_00578 1e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
BEEBGOEM_00579 5.5e-211 carA 6.3.5.5 F carbamoyl-phosphate synthetase glutamine chain
BEEBGOEM_00580 0.0 carB 6.3.5.5 F carbamoyl-phosphate synthetase ammonia chain
BEEBGOEM_00581 5.1e-131 2.1.1.223 S Putative SAM-dependent methyltransferase
BEEBGOEM_00582 7.6e-21 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BEEBGOEM_00583 6.9e-37 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BEEBGOEM_00584 1.7e-59 V permease protein
BEEBGOEM_00585 4.6e-43 V efflux transmembrane transporter activity
BEEBGOEM_00586 7.2e-24 ytrF V efflux transmembrane transporter activity
BEEBGOEM_00587 5.6e-78 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BEEBGOEM_00588 3.9e-52 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
BEEBGOEM_00590 0.0 mdlB V abc transporter atp-binding protein
BEEBGOEM_00591 0.0 lmrA V abc transporter atp-binding protein
BEEBGOEM_00592 1.3e-198 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
BEEBGOEM_00593 5e-125 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
BEEBGOEM_00594 3.3e-215 2.7.13.3 T signal transduction protein with a C-terminal ATPase domain
BEEBGOEM_00595 2.5e-132 rr02 KT response regulator
BEEBGOEM_00596 2.5e-219 2.7.7.73, 2.7.7.80 H Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
BEEBGOEM_00597 2.8e-168 V ABC transporter
BEEBGOEM_00598 5.4e-122 sagI S ABC-2 type transporter
BEEBGOEM_00599 6.9e-197 yceA S Belongs to the UPF0176 family
BEEBGOEM_00600 8e-28 XK27_00085 K Transcriptional
BEEBGOEM_00601 1.9e-22
BEEBGOEM_00602 6.5e-142 deoD_1 2.4.2.3 F Phosphorylase superfamily
BEEBGOEM_00603 2.5e-113 S VIT family
BEEBGOEM_00604 4.8e-131 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
BEEBGOEM_00605 7e-217 hipO 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
BEEBGOEM_00606 3.4e-17 ald 1.4.1.1 E alanine dehydrogenase activity
BEEBGOEM_00607 1.3e-46 ald 1.4.1.1 C Belongs to the AlaDH PNT family
BEEBGOEM_00608 7.5e-247 merA 1.16.1.1 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BEEBGOEM_00609 8.8e-104 GBS0088 J protein conserved in bacteria
BEEBGOEM_00610 7.9e-136 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
BEEBGOEM_00611 1.4e-170 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
BEEBGOEM_00612 1e-176 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I GHMP kinases N terminal domain
BEEBGOEM_00613 2.4e-184 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
BEEBGOEM_00614 1.8e-251 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BEEBGOEM_00615 1e-96 nudF 3.6.1.13 L AdP-ribose pyrophosphatase
BEEBGOEM_00616 2.5e-21
BEEBGOEM_00617 1.7e-117 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BEEBGOEM_00619 3e-29 U protein secretion
BEEBGOEM_00620 4.2e-68 U protein secretion
BEEBGOEM_00621 4.4e-191 dgs 2.4.1.208 GT4 M Glycosyltransferase, group 1 family protein
BEEBGOEM_00622 1.2e-247 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
BEEBGOEM_00623 5.5e-49 XK27_13030
BEEBGOEM_00624 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BEEBGOEM_00625 2.3e-57 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
BEEBGOEM_00626 1.6e-70 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
BEEBGOEM_00627 1.1e-161 S Protein of unknown function (DUF3114)
BEEBGOEM_00628 1.6e-22 S Protein of unknown function (DUF3114)
BEEBGOEM_00629 1.1e-116 yqfA K protein, Hemolysin III
BEEBGOEM_00630 1e-25 K hmm pf08876
BEEBGOEM_00631 2.7e-233 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
BEEBGOEM_00632 1.7e-218 mvaS 2.3.3.10 I synthase
BEEBGOEM_00633 2.2e-167 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BEEBGOEM_00634 3.4e-91 folA 1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BEEBGOEM_00635 9.7e-22
BEEBGOEM_00636 2e-225 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BEEBGOEM_00637 3e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
BEEBGOEM_00638 1.5e-250 mmuP E amino acid
BEEBGOEM_00639 1.2e-177 mmuM 1.5.1.20, 2.1.1.10 H Homocysteine
BEEBGOEM_00640 1.4e-29 S Domain of unknown function (DUF1912)
BEEBGOEM_00641 4.9e-15 L Helix-hairpin-helix DNA-binding motif class 1
BEEBGOEM_00642 7.1e-102 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
BEEBGOEM_00643 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
BEEBGOEM_00644 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
BEEBGOEM_00645 2.4e-200 ilvE 2.6.1.42 E Aminotransferase
BEEBGOEM_00646 4.8e-16 S Protein of unknown function (DUF2969)
BEEBGOEM_00649 8.4e-205 rpsA 1.17.7.4 J ribosomal protein S1
BEEBGOEM_00652 1.1e-44 S Domain of Unknown Function with PDB structure (DUF3862)
BEEBGOEM_00653 1.3e-29 S Domain of Unknown Function with PDB structure (DUF3862)
BEEBGOEM_00654 3.7e-70 M Pfam SNARE associated Golgi protein
BEEBGOEM_00655 3.4e-233 murN 2.3.2.10, 2.3.2.16 V FemAB family
BEEBGOEM_00656 1.2e-65 S oxidoreductase
BEEBGOEM_00657 3.7e-48 XK27_09445 S Domain of unknown function (DUF1827)
BEEBGOEM_00658 1.8e-86 mutT 3.5.4.33, 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
BEEBGOEM_00659 0.0 clpE O Belongs to the ClpA ClpB family
BEEBGOEM_00660 1.2e-180 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BEEBGOEM_00661 1.3e-34 ykuJ S protein conserved in bacteria
BEEBGOEM_00662 3.7e-117 WQ51_01820 P Binding-protein-dependent transport system inner membrane component
BEEBGOEM_00663 2.2e-131 glnQ 3.6.3.21 E abc transporter atp-binding protein
BEEBGOEM_00664 3.1e-78 feoA P FeoA domain protein
BEEBGOEM_00665 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
BEEBGOEM_00667 2.4e-104 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
BEEBGOEM_00668 2.2e-45 K sequence-specific DNA binding
BEEBGOEM_00669 1.5e-35 yugF I carboxylic ester hydrolase activity
BEEBGOEM_00670 7.5e-23 I Alpha/beta hydrolase family
BEEBGOEM_00671 3.9e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BEEBGOEM_00672 7.8e-149 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BEEBGOEM_00673 0.0 pbp2b 3.4.16.4 M penicillin-binding protein
BEEBGOEM_00674 4.9e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BEEBGOEM_00675 5.8e-64 licT K transcriptional antiterminator
BEEBGOEM_00676 6.8e-53 licT K transcriptional antiterminator
BEEBGOEM_00677 5.9e-88 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BEEBGOEM_00678 1.7e-64 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
BEEBGOEM_00679 8.3e-165 era M An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BEEBGOEM_00680 7.1e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
BEEBGOEM_00681 1.1e-104 coaE 2.7.1.24, 3.2.2.23, 4.2.99.18 GH23 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BEEBGOEM_00682 2.5e-220 mdtG EGP Major facilitator Superfamily
BEEBGOEM_00683 2e-33 secG U Preprotein translocase subunit SecG
BEEBGOEM_00684 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
BEEBGOEM_00685 1.1e-80 smpB O the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
BEEBGOEM_00686 9.6e-277 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BEEBGOEM_00687 1.7e-63 yugI 5.3.1.9 J RNA binding protein, contains ribosomal protein S1 domain
BEEBGOEM_00688 4.2e-211 pepQ 3.4.13.9 E Belongs to the peptidase M24B family
BEEBGOEM_00689 4.4e-183 ccpA K Catabolite control protein A
BEEBGOEM_00690 2.8e-28 yyaQ S YjbR
BEEBGOEM_00691 6.6e-101 yyaQ V Protein conserved in bacteria
BEEBGOEM_00692 1.3e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
BEEBGOEM_00693 1e-78 yueI S Protein of unknown function (DUF1694)
BEEBGOEM_00694 9.6e-247 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
BEEBGOEM_00695 2e-25 WQ51_00785
BEEBGOEM_00696 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
BEEBGOEM_00697 2e-219 ywbD 2.1.1.191 J Methyltransferase
BEEBGOEM_00698 8.6e-122 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
BEEBGOEM_00699 1.7e-162 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BEEBGOEM_00700 3.5e-202 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
BEEBGOEM_00701 4.5e-219 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BEEBGOEM_00702 2.2e-207 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
BEEBGOEM_00703 3.2e-53 yheA S Belongs to the UPF0342 family
BEEBGOEM_00704 3e-173 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
BEEBGOEM_00705 2.6e-236 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
BEEBGOEM_00706 1.7e-87 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BEEBGOEM_00707 6.7e-153 pheA 4.2.1.51 E Prephenate dehydratase
BEEBGOEM_00708 6.4e-252 msrR K Transcriptional regulator
BEEBGOEM_00709 2.2e-149 ydiA P C4-dicarboxylate transporter malic acid transport protein
BEEBGOEM_00710 7e-203 I acyl-CoA dehydrogenase
BEEBGOEM_00711 4.5e-97 mip S hydroperoxide reductase activity
BEEBGOEM_00712 1.7e-257 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BEEBGOEM_00713 8.9e-20
BEEBGOEM_00714 3.2e-46
BEEBGOEM_00715 1e-31 K Cro/C1-type HTH DNA-binding domain
BEEBGOEM_00716 7.8e-50 dam 2.1.1.72 L D12 class N6 adenine-specific DNA methyltransferase
BEEBGOEM_00717 4.8e-33 estA E GDSL-like Lipase/Acylhydrolase
BEEBGOEM_00718 1.1e-94
BEEBGOEM_00719 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
BEEBGOEM_00720 4.2e-172 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BEEBGOEM_00721 1.8e-53 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BEEBGOEM_00722 9e-195 S CRISPR-associated protein Csn2 subfamily St
BEEBGOEM_00723 2.3e-145 ycgQ S TIGR03943 family
BEEBGOEM_00724 1.2e-155 XK27_03015 S permease
BEEBGOEM_00726 0.0 yhgF K Transcriptional accessory protein
BEEBGOEM_00727 9.9e-42 pspC KT PspC domain
BEEBGOEM_00728 1.7e-168 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
BEEBGOEM_00729 4e-147 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BEEBGOEM_00731 5.5e-69 ytxH S General stress protein
BEEBGOEM_00733 2e-177 yegQ O Peptidase U32
BEEBGOEM_00734 3.4e-252 yegQ O Peptidase U32
BEEBGOEM_00735 8.1e-46 S CHY zinc finger
BEEBGOEM_00736 8.4e-88 bioY S biotin synthase
BEEBGOEM_00738 1.1e-33 XK27_12190 S protein conserved in bacteria
BEEBGOEM_00739 7.3e-234 mntH P H( )-stimulated, divalent metal cation uptake system
BEEBGOEM_00740 4.8e-11
BEEBGOEM_00741 6e-209 dcm 2.1.1.37 H C-5 cytosine-specific DNA methylase
BEEBGOEM_00742 1.2e-224 mutH L DNA mismatch repair enzyme MutH
BEEBGOEM_00743 5.2e-29 S SIR2-like domain
BEEBGOEM_00744 1.2e-33 S SIR2-like domain
BEEBGOEM_00745 1.9e-286 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
BEEBGOEM_00746 1.5e-154 M LysM domain
BEEBGOEM_00747 5.9e-16
BEEBGOEM_00748 9.8e-174 S hydrolase
BEEBGOEM_00749 5.1e-116 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase
BEEBGOEM_00750 7.9e-82 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BEEBGOEM_00751 2.2e-144 XK27_00880 3.5.1.28 M Glycosyl hydrolase, family 25
BEEBGOEM_00752 2.1e-27 P Hemerythrin HHE cation binding domain protein
BEEBGOEM_00753 1.4e-113 1.14.14.5 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BEEBGOEM_00754 1.7e-10 MA20_36090 S Protein of unknown function (DUF2974)
BEEBGOEM_00755 8e-18 MA20_36090 S Protein of unknown function (DUF2974)
BEEBGOEM_00756 8.3e-76 sdh 1.1.1.276, 1.1.1.313, 1.1.1.381 S Belongs to the short-chain dehydrogenases reductases (SDR) family
BEEBGOEM_00757 1.4e-44 sdh 1.1.1.276, 1.1.1.313, 1.1.1.381 S Belongs to the short-chain dehydrogenases reductases (SDR) family
BEEBGOEM_00758 0.0 hsdR 3.1.21.3 V Type I restriction enzyme R protein N terminus (HSDR_N)
BEEBGOEM_00759 7.3e-289 hsdM 2.1.1.72 V N-6 DNA Methylase
BEEBGOEM_00760 9.3e-68 hsdS 3.1.21.3 L Type I restriction modification DNA specificity domain
BEEBGOEM_00762 2.5e-44
BEEBGOEM_00763 3e-38
BEEBGOEM_00764 8.8e-157 spd F DNA RNA non-specific endonuclease
BEEBGOEM_00765 1.5e-92 lemA S LemA family
BEEBGOEM_00766 1.8e-135 htpX O Belongs to the peptidase M48B family
BEEBGOEM_00767 5.1e-73 S Psort location CytoplasmicMembrane, score
BEEBGOEM_00768 6.2e-56 S Domain of unknown function (DUF4430)
BEEBGOEM_00769 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
BEEBGOEM_00770 2.4e-184 holA 2.7.7.7 L DNA polymerase III delta subunit
BEEBGOEM_00771 8.5e-113 sodA 1.15.1.1 C radicals which are normally produced within the cells and which are toxic to biological systems
BEEBGOEM_00772 1.4e-190 3.5.2.6 V D-alanyl-D-alanine carboxypeptidase
BEEBGOEM_00773 1.5e-115 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
BEEBGOEM_00774 1.6e-91 dps P Belongs to the Dps family
BEEBGOEM_00775 1.1e-80 perR P Belongs to the Fur family
BEEBGOEM_00776 8.4e-28 yqgQ S protein conserved in bacteria
BEEBGOEM_00777 1.6e-177 glk 2.7.1.2 G Glucokinase
BEEBGOEM_00778 0.0 typA T GTP-binding protein TypA
BEEBGOEM_00780 1.6e-252 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BEEBGOEM_00781 1e-201 murG 2.4.1.227 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BEEBGOEM_00782 6.9e-177 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
BEEBGOEM_00783 1.1e-251 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
BEEBGOEM_00784 5.4e-237 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BEEBGOEM_00785 2.7e-123 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BEEBGOEM_00786 2e-95 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
BEEBGOEM_00787 8.8e-35 yggT D integral membrane protein
BEEBGOEM_00788 4.7e-143 ylmH T S4 RNA-binding domain
BEEBGOEM_00789 3.3e-134 divIVA D Cell division protein DivIVA
BEEBGOEM_00790 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BEEBGOEM_00791 3.2e-45 L Transposase
BEEBGOEM_00793 8.8e-229 mntH P Mn2 and Fe2 transporters of the NRAMP family
BEEBGOEM_00794 2e-45 rpmE2 J 50S ribosomal protein L31
BEEBGOEM_00795 1.9e-175 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
BEEBGOEM_00796 1e-184 nrnA 3.1.13.3, 3.1.3.7 S domain protein
BEEBGOEM_00797 8.9e-155 gst O Glutathione S-transferase
BEEBGOEM_00798 4.6e-188 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BEEBGOEM_00799 4.5e-111 tdk 2.7.1.21 F thymidine kinase
BEEBGOEM_00800 3e-193 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BEEBGOEM_00801 1.2e-154 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
BEEBGOEM_00802 9.7e-109 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
BEEBGOEM_00803 1.8e-234 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BEEBGOEM_00804 6e-177 ndpA S 37-kD nucleoid-associated bacterial protein
BEEBGOEM_00805 2.4e-107 pvaA M lytic transglycosylase activity
BEEBGOEM_00806 0.0 yfiB1 V abc transporter atp-binding protein
BEEBGOEM_00807 0.0 XK27_10035 V abc transporter atp-binding protein
BEEBGOEM_00808 1.7e-09 S D-Ala-teichoic acid biosynthesis protein
BEEBGOEM_00809 9.3e-297 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BEEBGOEM_00810 4.6e-238 dltB M Membrane protein involved in D-alanine export
BEEBGOEM_00811 1.7e-35 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BEEBGOEM_00812 5.2e-229 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BEEBGOEM_00813 2.5e-250 L Transposase
BEEBGOEM_00814 0.0 3.6.3.8 P cation transport ATPase
BEEBGOEM_00815 1.1e-151 3.6.3.8 P cation transport ATPase
BEEBGOEM_00816 0.0 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH component I
BEEBGOEM_00817 5.1e-106 V Abi-like protein
BEEBGOEM_00818 1.7e-146 2.1.1.37 H cytosine-specific methyltransferase
BEEBGOEM_00819 2.6e-72 hpaIIR 3.1.21.4 L HpaII restriction endonuclease
BEEBGOEM_00820 3e-44 ymbI L transposase activity
BEEBGOEM_00821 4e-22 L Belongs to the 'phage' integrase family
BEEBGOEM_00822 1.4e-66 S tRNA_anti-like
BEEBGOEM_00823 2e-103
BEEBGOEM_00825 2.3e-12
BEEBGOEM_00827 2e-296 S DNA primase
BEEBGOEM_00828 3e-164 KL Phage plasmid primase P4 family
BEEBGOEM_00829 6.9e-22
BEEBGOEM_00834 5.5e-17 K TRANSCRIPTIONal
BEEBGOEM_00835 6e-39 K Helix-turn-helix
BEEBGOEM_00836 7.1e-217 sip L Belongs to the 'phage' integrase family
BEEBGOEM_00838 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BEEBGOEM_00839 7.3e-166 metF 1.5.1.20 C reductase
BEEBGOEM_00840 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
BEEBGOEM_00841 1.6e-92 panT S ECF transporter, substrate-specific component
BEEBGOEM_00842 4.8e-94 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BEEBGOEM_00843 6.2e-120 coaB 4.1.1.36, 6.3.2.5 H Phosphopantothenate-cysteine ligase
BEEBGOEM_00844 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
BEEBGOEM_00845 6.4e-66 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
BEEBGOEM_00846 4.3e-41 T PhoQ Sensor
BEEBGOEM_00847 1.1e-13 T PhoQ Sensor
BEEBGOEM_00848 9.2e-110 T PhoQ Sensor
BEEBGOEM_00849 1.2e-165 L integrase core domain
BEEBGOEM_00850 4.7e-117 L Transposase
BEEBGOEM_00851 2.1e-30 rpsT J rRNA binding
BEEBGOEM_00852 2.5e-172 coaA 2.7.1.33 F Pantothenic acid kinase
BEEBGOEM_00853 1.8e-107 rsmC 2.1.1.172 J Methyltransferase small domain protein
BEEBGOEM_00854 1.3e-24 pdp 2.4.2.2, 2.4.2.4 F phosphorylase activity
BEEBGOEM_00855 7.5e-101 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
BEEBGOEM_00856 5.5e-29 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BEEBGOEM_00857 1.5e-62 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BEEBGOEM_00858 2.2e-47 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
BEEBGOEM_00859 1.5e-189 tcsA S ABC-type transport system, periplasmic component surface lipoprotein
BEEBGOEM_00860 2.7e-280 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
BEEBGOEM_00861 4.7e-191 yufP S Belongs to the binding-protein-dependent transport system permease family
BEEBGOEM_00862 4.8e-171 yufQ S Belongs to the binding-protein-dependent transport system permease family
BEEBGOEM_00863 4e-121 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
BEEBGOEM_00864 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
BEEBGOEM_00865 3.1e-81 ypmB S Protein conserved in bacteria
BEEBGOEM_00866 6.5e-218 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
BEEBGOEM_00867 1.7e-262 asnS 6.1.1.22 J Catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
BEEBGOEM_00868 1.5e-07
BEEBGOEM_00869 2.4e-30
BEEBGOEM_00870 3e-13
BEEBGOEM_00871 3e-63 tdcF 3.5.99.10 J endoribonuclease L-PSP
BEEBGOEM_00872 2e-123 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
BEEBGOEM_00873 2.2e-81 queD 4.1.2.50, 4.2.3.12 H synthase
BEEBGOEM_00874 3.9e-133 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
BEEBGOEM_00875 2.5e-94 queF 1.7.1.13 S Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily
BEEBGOEM_00876 4.2e-18 D nuclear chromosome segregation
BEEBGOEM_00877 5.3e-136 yejC S cyclic nucleotide-binding protein
BEEBGOEM_00878 1.2e-163 rapZ S Displays ATPase and GTPase activities
BEEBGOEM_00879 2.8e-182 ybhK S Required for morphogenesis under gluconeogenic growth conditions
BEEBGOEM_00880 8.7e-162 whiA K May be required for sporulation
BEEBGOEM_00881 8e-90 pepD E Dipeptidase
BEEBGOEM_00882 5.8e-41 pepD E dipeptidase activity
BEEBGOEM_00883 5.4e-32 cspD K Cold shock protein domain
BEEBGOEM_00884 1.6e-249 L Transposase
BEEBGOEM_00885 9.4e-43 K Cold-Shock Protein
BEEBGOEM_00886 2.9e-131 L Transposase
BEEBGOEM_00887 8e-59 L Transposase
BEEBGOEM_00888 0.0 copB 3.6.3.4 P P-type ATPase
BEEBGOEM_00889 3.7e-221 L Transposase
BEEBGOEM_00890 4.4e-194 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
BEEBGOEM_00891 2.3e-170 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
BEEBGOEM_00892 3.5e-219 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
BEEBGOEM_00893 3.3e-98 cysE 2.3.1.30 E serine acetyltransferase
BEEBGOEM_00894 6.3e-54 L Transposase
BEEBGOEM_00895 5.4e-104 L Transposase
BEEBGOEM_00896 5.2e-56 hsdS 2.1.1.72, 3.1.21.3 V type I restriction modification DNA specificity domain
BEEBGOEM_00897 5.2e-113 hsdM 2.1.1.72 V type I restriction-modification system
BEEBGOEM_00898 2.9e-154 glcU U Glucose uptake
BEEBGOEM_00899 1.1e-08 mycA 4.2.1.53 S Myosin-crossreactive antigen
BEEBGOEM_00900 3.4e-79 hsdM 2.1.1.72 V HsdM N-terminal domain
BEEBGOEM_00901 3.7e-88 XK27_10720 D peptidase activity
BEEBGOEM_00902 2.1e-293 adcA P Belongs to the bacterial solute-binding protein 9 family
BEEBGOEM_00903 1.7e-08
BEEBGOEM_00904 1.5e-170 yeiH S Membrane
BEEBGOEM_00905 1.9e-119 mur1 NU muramidase
BEEBGOEM_00906 6.6e-71 L transposition
BEEBGOEM_00907 4.5e-166 cpsY K Transcriptional regulator
BEEBGOEM_00908 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
BEEBGOEM_00909 2.5e-58 phnA P Alkylphosphonate utilization operon protein PhnA
BEEBGOEM_00910 5.3e-105 artQ P ABC transporter (Permease
BEEBGOEM_00911 3.4e-112 glnQ 3.6.3.21 E abc transporter atp-binding protein
BEEBGOEM_00912 1.4e-158 aatB ET ABC transporter substrate-binding protein
BEEBGOEM_00913 3.1e-142 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BEEBGOEM_00914 2.3e-62 adhP 1.1.1.1 C alcohol dehydrogenase
BEEBGOEM_00915 7.4e-110 adhP 1.1.1.1 C alcohol dehydrogenase
BEEBGOEM_00917 1.1e-20
BEEBGOEM_00918 0.0 res_1 3.1.21.5 S Type III restriction
BEEBGOEM_00919 0.0 sthIM 2.1.1.72 L Adenine specific DNA methylase Mod
BEEBGOEM_00920 1.1e-302 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
BEEBGOEM_00921 2e-126 gntR1 K transcriptional
BEEBGOEM_00922 1.1e-53 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
BEEBGOEM_00923 1.3e-269 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BEEBGOEM_00924 2.4e-87 niaX
BEEBGOEM_00925 8.6e-90 niaR S small molecule binding protein (contains 3H domain)
BEEBGOEM_00926 6.9e-127 K DNA-binding helix-turn-helix protein
BEEBGOEM_00927 1.4e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BEEBGOEM_00928 1.5e-135 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BEEBGOEM_00929 1.1e-167 GK ROK family
BEEBGOEM_00930 2.4e-158 dprA LU DNA protecting protein DprA
BEEBGOEM_00931 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BEEBGOEM_00932 5.1e-153 S TraX protein
BEEBGOEM_00933 2.2e-122 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
BEEBGOEM_00934 6.9e-251 T PhoQ Sensor
BEEBGOEM_00935 6.6e-259 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
BEEBGOEM_00936 1.9e-152 XK27_05470 E Methionine synthase
BEEBGOEM_00937 1.7e-75 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
BEEBGOEM_00938 2.7e-48 pspE P Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BEEBGOEM_00939 6.8e-51 IQ Acetoin reductase
BEEBGOEM_00940 3.9e-19 IQ Acetoin reductase
BEEBGOEM_00941 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
BEEBGOEM_00945 4.1e-53 K peptidyl-tyrosine sulfation
BEEBGOEM_00946 1.8e-156 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
BEEBGOEM_00949 1.3e-212 pqqE C radical SAM domain protein
BEEBGOEM_00950 3.9e-136 speB 3.5.3.11 E hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
BEEBGOEM_00951 6.6e-61 EGP Major facilitator Superfamily
BEEBGOEM_00952 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
BEEBGOEM_00953 3e-133 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
BEEBGOEM_00954 1e-193 L Transposase
BEEBGOEM_00955 6.1e-13 L Transposase
BEEBGOEM_00957 1.2e-103 K Transcriptional regulator, TetR family
BEEBGOEM_00958 1.2e-158 czcD P cation diffusion facilitator family transporter
BEEBGOEM_00959 1e-209 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
BEEBGOEM_00960 8.1e-52 adhB 1.1.1.1, 1.1.1.14 E Dehydrogenase
BEEBGOEM_00961 2.7e-106 adhB 1.1.1.1, 1.1.1.14 E Dehydrogenase
BEEBGOEM_00962 6e-08 S Hydrolases of the alpha beta superfamily
BEEBGOEM_00963 1.8e-16 S Alpha/beta hydrolase of unknown function (DUF915)
BEEBGOEM_00964 1.2e-79 S Alpha/beta hydrolase of unknown function (DUF915)
BEEBGOEM_00967 2.6e-143 2.4.2.3 F Phosphorylase superfamily
BEEBGOEM_00968 4.1e-118 gph 3.1.3.18 S HAD hydrolase, family IA, variant 1
BEEBGOEM_00969 1.8e-24 yclQ P ABC-type enterochelin transport system, periplasmic component
BEEBGOEM_00970 3.6e-18 yclQ P ABC-type enterochelin transport system, periplasmic component
BEEBGOEM_00971 9.6e-72 dinF V Mate efflux family protein
BEEBGOEM_00972 5.1e-26 dinF V drug transmembrane transporter activity
BEEBGOEM_00973 6.5e-266 S Psort location CytoplasmicMembrane, score
BEEBGOEM_00974 1.7e-309 FbpA K RNA-binding protein homologous to eukaryotic snRNP
BEEBGOEM_00976 2.1e-98 S TraX protein
BEEBGOEM_00977 3.2e-95 thiJ 2.7.11.1, 3.5.1.124 S DJ-1 family
BEEBGOEM_00978 6.3e-148 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
BEEBGOEM_00979 3.2e-175 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
BEEBGOEM_00980 1.8e-184 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BEEBGOEM_00981 3.7e-54 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BEEBGOEM_00982 1.3e-131 cas6 S CRISPR-associated endoribonuclease Cas6
BEEBGOEM_00983 0.0 csm1 S CRISPR-associated protein Csm1 family
BEEBGOEM_00984 5.6e-62 csm2 L Pfam:DUF310
BEEBGOEM_00985 1.1e-116 csm3 L RAMP superfamily
BEEBGOEM_00986 1.4e-164 csm4 L CRISPR-associated RAMP protein, Csm4 family
BEEBGOEM_00987 1.9e-203 csm5 L CRISPR-associated RAMP protein, Csm5 family
BEEBGOEM_00988 3.4e-61 csm6 S Psort location Cytoplasmic, score
BEEBGOEM_00989 7e-127 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
BEEBGOEM_00990 7.5e-112 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BEEBGOEM_00991 1.2e-63 nylA 3.5.1.4 J Belongs to the amidase family
BEEBGOEM_00993 7.9e-266 dtpT E transporter
BEEBGOEM_00994 1e-103 nylA 3.5.1.4 J Belongs to the amidase family
BEEBGOEM_00995 8.8e-134 yckB ET Belongs to the bacterial solute-binding protein 3 family
BEEBGOEM_00996 1.8e-67 yecS P ABC transporter (Permease
BEEBGOEM_00998 8.1e-114 sasH 3.1.3.5, 3.6.1.45 F Belongs to the 5'-nucleotidase family
BEEBGOEM_00999 9.8e-35 3.1.3.6, 3.1.4.16 F nucleotide catabolic process
BEEBGOEM_01000 1.4e-104 yfiF3 K sequence-specific DNA binding
BEEBGOEM_01001 1.3e-246 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BEEBGOEM_01002 1.8e-240 agcS E (Alanine) symporter
BEEBGOEM_01003 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
BEEBGOEM_01004 3.5e-241 metY 2.5.1.49 E o-acetylhomoserine
BEEBGOEM_01005 1.8e-59 Q phosphatase activity
BEEBGOEM_01006 9.3e-62 S haloacid dehalogenase-like hydrolase
BEEBGOEM_01007 3.5e-88 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BEEBGOEM_01008 1.1e-110 hsdS2 2.1.1.72 V Type I restriction modification DNA specificity domain
BEEBGOEM_01009 3.6e-136 XK27_04775 S hemerythrin HHE cation binding domain
BEEBGOEM_01010 5.2e-22 XK27_04775 P Hemerythrin HHE cation binding domain protein
BEEBGOEM_01011 2.4e-150 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BEEBGOEM_01012 2.6e-174 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
BEEBGOEM_01013 4.2e-71 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
BEEBGOEM_01014 1.9e-43 yktA S Belongs to the UPF0223 family
BEEBGOEM_01015 1.1e-141 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
BEEBGOEM_01016 1.5e-255 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
BEEBGOEM_01017 4.3e-158 pstS P phosphate
BEEBGOEM_01018 2.5e-156 pstC P probably responsible for the translocation of the substrate across the membrane
BEEBGOEM_01019 5.9e-155 pstA P phosphate transport system permease
BEEBGOEM_01020 1e-150 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BEEBGOEM_01021 1.7e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BEEBGOEM_01022 2.4e-113 phoU P Plays a role in the regulation of phosphate uptake
BEEBGOEM_01023 0.0 pepN 3.4.11.2 E aminopeptidase
BEEBGOEM_01024 1.6e-194 xerS D Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division
BEEBGOEM_01025 1.3e-187 lplA 6.3.1.20 H Lipoate-protein ligase
BEEBGOEM_01027 3.7e-09
BEEBGOEM_01028 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
BEEBGOEM_01029 3.4e-304 malQ 2.4.1.25 GH77 G 4-alpha-glucanotransferase
BEEBGOEM_01030 2.3e-23 L Transposase
BEEBGOEM_01031 4.6e-25 tatA U protein secretion
BEEBGOEM_01032 5.8e-121 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BEEBGOEM_01033 3.9e-301 ywbL P COG0672 High-affinity Fe2 Pb2 permease
BEEBGOEM_01034 1.5e-233 ycdB P peroxidase
BEEBGOEM_01035 4.6e-152 ycdO P periplasmic lipoprotein involved in iron transport
BEEBGOEM_01036 6.5e-177 fatB P ABC-type enterochelin transport system, periplasmic component
BEEBGOEM_01037 6.8e-136 yclP 3.6.3.34 P abc transporter atp-binding protein
BEEBGOEM_01038 1.9e-167 fatC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BEEBGOEM_01039 4e-165 yclN P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BEEBGOEM_01040 2e-139 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
BEEBGOEM_01041 3.8e-54 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
BEEBGOEM_01042 7.6e-66 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
BEEBGOEM_01043 2.4e-134 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
BEEBGOEM_01044 1.9e-37 3.5.1.28 NU amidase activity
BEEBGOEM_01045 8.5e-266 3.5.1.28 NU amidase activity
BEEBGOEM_01046 3.6e-82 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
BEEBGOEM_01047 2.6e-20 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
BEEBGOEM_01048 0.0 lpdA 1.8.1.4 C Dehydrogenase
BEEBGOEM_01049 1.8e-198 acoC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
BEEBGOEM_01050 3.7e-182 acoB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
BEEBGOEM_01051 6e-185 acoA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
BEEBGOEM_01052 5e-38 P membrane protein (DUF2207)
BEEBGOEM_01053 5.7e-66 S the current gene model (or a revised gene model) may contain a frame shift
BEEBGOEM_01054 1.1e-234 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
BEEBGOEM_01055 7.2e-126 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BEEBGOEM_01056 4e-215 yeaB K Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BEEBGOEM_01057 5.4e-19 dacA1 3.4.16.4 M Belongs to the peptidase S11 family
BEEBGOEM_01058 2.9e-21 dacA1 3.4.16.4 M Belongs to the peptidase S11 family
BEEBGOEM_01059 3.9e-24 3.4.16.4 M Belongs to the peptidase S11 family
BEEBGOEM_01060 2.3e-26 3.4.16.4 M Belongs to the peptidase S11 family
BEEBGOEM_01061 4.3e-83 3.4.16.4 M Belongs to the peptidase S11 family
BEEBGOEM_01062 1.1e-158 rssA S Phospholipase, patatin family
BEEBGOEM_01063 1.9e-59 estA E GDSL-like protein
BEEBGOEM_01064 5.5e-34 estA E Lysophospholipase L1 and related esterases
BEEBGOEM_01065 8.5e-290 S unusual protein kinase
BEEBGOEM_01066 4.9e-39 S granule-associated protein
BEEBGOEM_01067 3.2e-36 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
BEEBGOEM_01068 2.6e-97 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
BEEBGOEM_01069 2e-18 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
BEEBGOEM_01070 1.1e-198 S hmm pf01594
BEEBGOEM_01071 2.5e-99 G Belongs to the phosphoglycerate mutase family
BEEBGOEM_01072 7.2e-104 G Belongs to the phosphoglycerate mutase family
BEEBGOEM_01073 1.1e-95 pgm G Belongs to the phosphoglycerate mutase family
BEEBGOEM_01074 5.6e-65 supH 3.1.3.102, 3.1.3.104 Q phosphatase activity
BEEBGOEM_01075 5.4e-15 supH 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
BEEBGOEM_01076 2.2e-94 V VanZ like family
BEEBGOEM_01077 3.1e-37 L Transposase
BEEBGOEM_01078 6.2e-112 L the current gene model (or a revised gene model) may contain a frame shift
BEEBGOEM_01079 6.4e-33 cpsJ S Glycosyltransferase like family 2
BEEBGOEM_01080 7.8e-16
BEEBGOEM_01081 6.5e-72 M Glycosyltransferase sugar-binding region containing DXD motif
BEEBGOEM_01082 1.9e-41 pssE S Glycosyltransferase family 28 C-terminal domain
BEEBGOEM_01083 1.4e-72 cpsF M Oligosaccharide biosynthesis protein Alg14 like
BEEBGOEM_01084 1.2e-70 rfbP 2.7.8.6 M Bacterial sugar transferase
BEEBGOEM_01085 3.3e-37 L transposase activity
BEEBGOEM_01086 1.1e-60 L Integrase core domain
BEEBGOEM_01087 3.2e-71 L COG2801 Transposase and inactivated derivatives
BEEBGOEM_01088 1.1e-235 cps1C S Polysaccharide biosynthesis protein
BEEBGOEM_01089 1.3e-23 L Transposase
BEEBGOEM_01090 1.3e-199 L Transposase
BEEBGOEM_01091 6.9e-96 2.7.8.12 GT2 S Glycosyltransferase like family 2
BEEBGOEM_01092 8.8e-139 L Integrase core domain
BEEBGOEM_01093 2.2e-22 L Transposase
BEEBGOEM_01094 9.7e-23 rgpAc GT4 M group 1 family protein
BEEBGOEM_01095 1.7e-249 cpsE M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
BEEBGOEM_01096 1.4e-112 cpsD D COG0489 ATPases involved in chromosome partitioning
BEEBGOEM_01097 1.1e-103 cps4C M biosynthesis protein
BEEBGOEM_01098 3e-136 cpsB 3.1.3.48 GM Capsular polysaccharide biosynthesis protein
BEEBGOEM_01099 4.2e-251 cps4A K Cell envelope-like function transcriptional attenuator common domain protein
BEEBGOEM_01100 1.2e-129 deoD 2.4.2.1, 2.4.2.28 F purine nucleoside phosphorylase
BEEBGOEM_01101 4.1e-38 yfeJ 6.3.5.2 F glutamine amidotransferase
BEEBGOEM_01102 2.2e-67 yfeJ 6.3.5.2 F glutamine amidotransferase
BEEBGOEM_01103 6.1e-36 clcA_2 P chloride channel
BEEBGOEM_01104 1.2e-149 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
BEEBGOEM_01105 9.6e-47 S Protein of unknown function (DUF1697)
BEEBGOEM_01106 2.9e-237 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
BEEBGOEM_01107 1.7e-122 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BEEBGOEM_01109 1.5e-111 ung2 3.2.2.27 L Uracil-DNA glycosylase
BEEBGOEM_01110 2.4e-275 pepV 3.5.1.18 E Dipeptidase
BEEBGOEM_01111 6.4e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
BEEBGOEM_01112 1.7e-47 XK27_03610 K Gnat family
BEEBGOEM_01113 1.6e-24 L Transposase
BEEBGOEM_01114 1.5e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BEEBGOEM_01115 2.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
BEEBGOEM_01116 3.5e-86 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BEEBGOEM_01117 2.5e-121 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
BEEBGOEM_01118 3.9e-15 M LysM domain
BEEBGOEM_01119 2.9e-90 ebsA S Family of unknown function (DUF5322)
BEEBGOEM_01120 1.8e-234 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
BEEBGOEM_01121 4.2e-98 lepB 3.4.21.89 U Belongs to the peptidase S26 family
BEEBGOEM_01122 4.9e-224 G COG0457 FOG TPR repeat
BEEBGOEM_01123 1.3e-178 yubA S permease
BEEBGOEM_01124 1.7e-92 mutX 3.6.1.55 F NTP pyrophosphohydrolases including oxidative damage repair enzymes
BEEBGOEM_01125 4.7e-163 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
BEEBGOEM_01126 2.5e-124 ftsE D cell division ATP-binding protein FtsE
BEEBGOEM_01127 1.6e-182 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BEEBGOEM_01128 2.7e-202 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BEEBGOEM_01129 9.2e-183 yjjH S Calcineurin-like phosphoesterase
BEEBGOEM_01130 1.7e-134 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
BEEBGOEM_01131 0.0 pacL 3.6.3.8 P cation transport ATPase
BEEBGOEM_01132 2.6e-67 ywiB S Domain of unknown function (DUF1934)
BEEBGOEM_01133 8.3e-51 XK27_00115 2.3.1.128 K acetyltransferase
BEEBGOEM_01134 4.6e-146 yidA S hydrolases of the HAD superfamily
BEEBGOEM_01135 5.3e-231 murM 2.3.2.10, 2.3.2.16 V protein involved in methicillin resistance
BEEBGOEM_01136 2.1e-154 vicX 3.1.26.11 S Metal-dependent hydrolases of the beta-lactamase superfamily I
BEEBGOEM_01137 1.5e-247 vicK 2.7.13.3 T Histidine kinase
BEEBGOEM_01138 9.9e-129 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
BEEBGOEM_01139 2.1e-140 glnQ 3.6.3.21 E abc transporter atp-binding protein
BEEBGOEM_01140 3.5e-149 peb1A ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
BEEBGOEM_01141 8e-115 gltJ P ABC transporter (Permease
BEEBGOEM_01142 4.2e-110 tcyB_2 P ABC transporter (permease)
BEEBGOEM_01143 2.4e-124 endA F DNA RNA non-specific endonuclease
BEEBGOEM_01144 1.2e-25 epuA S DNA-directed RNA polymerase subunit beta
BEEBGOEM_01145 7.2e-231 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BEEBGOEM_01147 2.7e-196 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
BEEBGOEM_01148 5.9e-26 G Domain of unknown function (DUF4832)
BEEBGOEM_01149 2.1e-203 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BEEBGOEM_01150 1.6e-174 birA 6.3.4.15 HK Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
BEEBGOEM_01151 3.2e-295 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BEEBGOEM_01152 1.6e-88 ytsP 1.8.4.14 T GAF domain-containing protein
BEEBGOEM_01153 4.9e-165 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BEEBGOEM_01154 2.7e-19 WQ51_02665 S Protein of unknown function (DUF3042)
BEEBGOEM_01155 5.8e-80
BEEBGOEM_01157 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
BEEBGOEM_01158 3.5e-206 XK27_05110 P Chloride transporter ClC family
BEEBGOEM_01159 8.7e-41 pheA 1.3.1.12, 2.3.1.79, 4.2.1.51, 5.4.99.5 E Chorismate mutase
BEEBGOEM_01160 1.3e-282 clcA P Chloride transporter, ClC family
BEEBGOEM_01161 2.3e-75 fld C Flavodoxin
BEEBGOEM_01162 3.3e-14 XK27_08880
BEEBGOEM_01163 6.1e-126 XK27_08875 O Zinc-dependent metalloprotease
BEEBGOEM_01164 1.6e-151 estA CE1 S Putative esterase
BEEBGOEM_01165 3e-309 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BEEBGOEM_01166 4.4e-135 XK27_08845 S abc transporter atp-binding protein
BEEBGOEM_01167 2.2e-146 XK27_08840 S Belongs to the binding-protein-dependent transport system permease family
BEEBGOEM_01168 9.5e-178 XK27_08835 S ABC transporter substrate binding protein
BEEBGOEM_01169 6.9e-30 Q the current gene model (or a revised gene model) may contain a frame shift
BEEBGOEM_01170 6.1e-28 Q the current gene model (or a revised gene model) may contain a frame shift
BEEBGOEM_01173 1.3e-276 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
BEEBGOEM_01174 1.2e-188 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
BEEBGOEM_01175 0.0 dnaE 2.7.7.7 L DNA polymerase
BEEBGOEM_01176 1.4e-152 sua5 2.7.7.87 J Belongs to the SUA5 family
BEEBGOEM_01177 3.1e-112 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BEEBGOEM_01178 6.8e-275 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BEEBGOEM_01179 2.5e-43 ysdA L Membrane
BEEBGOEM_01180 7.3e-189 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
BEEBGOEM_01181 3.4e-291 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BEEBGOEM_01182 4.6e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BEEBGOEM_01183 1.1e-178 pyrD 1.3.1.14, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate
BEEBGOEM_01185 2.8e-39 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
BEEBGOEM_01186 1.7e-83 ypmS S Protein conserved in bacteria
BEEBGOEM_01187 3.9e-143 ypmR E lipolytic protein G-D-S-L family
BEEBGOEM_01188 1e-148 DegV S DegV family
BEEBGOEM_01189 5.8e-305 recN L May be involved in recombinational repair of damaged DNA
BEEBGOEM_01190 3.7e-73 argR K Regulates arginine biosynthesis genes
BEEBGOEM_01191 4.7e-157 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
BEEBGOEM_01192 6.6e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
BEEBGOEM_01193 3.5e-29 xseB 3.1.11.6 L exodeoxyribonuclease VII activity
BEEBGOEM_01194 1.2e-247 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
BEEBGOEM_01197 3.4e-120 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BEEBGOEM_01198 2.9e-125 dnaD
BEEBGOEM_01199 1.3e-181 metA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BEEBGOEM_01200 2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BEEBGOEM_01201 0.0 recJ L Single-strand DNA-specific exonuclease, C terminal domain
BEEBGOEM_01202 6.7e-139 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
BEEBGOEM_01203 2e-174 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
BEEBGOEM_01204 1e-116 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
BEEBGOEM_01205 7.8e-222 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BEEBGOEM_01206 5.6e-240 rodA D Belongs to the SEDS family
BEEBGOEM_01207 1.8e-50 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP
BEEBGOEM_01208 1.2e-60 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BEEBGOEM_01209 1e-108 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
BEEBGOEM_01210 8.3e-21 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
BEEBGOEM_01211 1.7e-131 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
BEEBGOEM_01212 1.6e-111 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BEEBGOEM_01213 2.2e-105 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
BEEBGOEM_01214 2.6e-228 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BEEBGOEM_01215 1.4e-116 hisG 2.4.2.17 E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
BEEBGOEM_01216 5.7e-183 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
BEEBGOEM_01217 1.6e-154 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BEEBGOEM_01218 1.5e-29 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BEEBGOEM_01220 3.9e-223 L Transposase
BEEBGOEM_01221 8.2e-26 L Integrase core domain protein
BEEBGOEM_01222 1.6e-55 L transposition
BEEBGOEM_01223 8.2e-22 L Transposase
BEEBGOEM_01224 5.2e-36 L transposase activity
BEEBGOEM_01225 1.3e-22 XK27_08085
BEEBGOEM_01226 5.6e-92 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
BEEBGOEM_01227 2.3e-09 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
BEEBGOEM_01228 2e-140 hisK 3.1.3.15 E Histidinol phosphatase and related hydrolases of the PHP family
BEEBGOEM_01229 1.1e-121 ylfI S tigr01906
BEEBGOEM_01230 5.9e-143 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
BEEBGOEM_01231 1.5e-143 fat 3.1.2.21 I Acyl-ACP thioesterase
BEEBGOEM_01232 4.1e-217 hemN H Involved in the biosynthesis of porphyrin-containing compound
BEEBGOEM_01235 1.9e-205 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
BEEBGOEM_01236 8.3e-113 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
BEEBGOEM_01237 1.9e-161 rfbA 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
BEEBGOEM_01238 2.1e-207 yurR 1.4.5.1 E oxidoreductase
BEEBGOEM_01239 5.7e-102 zupT P Mediates zinc uptake. May also transport other divalent cations
BEEBGOEM_01240 8.1e-148 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BEEBGOEM_01241 7.9e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
BEEBGOEM_01242 1.3e-70 gtrA S GtrA-like protein
BEEBGOEM_01243 1.5e-250 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BEEBGOEM_01244 2.3e-168 ybbR S Protein conserved in bacteria
BEEBGOEM_01245 1.2e-123 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BEEBGOEM_01246 1.1e-253 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain protein
BEEBGOEM_01247 8.7e-150 cobQ S glutamine amidotransferase
BEEBGOEM_01248 0.0 mprF 2.3.2.3 J Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BEEBGOEM_01249 2.2e-131 pip 1.11.1.10 S Alpha beta hydrolase
BEEBGOEM_01250 6.3e-13 MA20_06245 S yiaA/B two helix domain
BEEBGOEM_01252 0.0 uup S abc transporter atp-binding protein
BEEBGOEM_01253 2.1e-114 udk 2.7.1.48 F Cytidine monophosphokinase
BEEBGOEM_01254 2.1e-178 yfmL 3.6.4.13 L DEAD DEAH box helicase
BEEBGOEM_01255 2.1e-28 6.3.2.2, 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
BEEBGOEM_01256 8.6e-265 gapN 1.2.1.9 C Belongs to the aldehyde dehydrogenase family
BEEBGOEM_01257 1.6e-249 L Transposase
BEEBGOEM_01258 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BEEBGOEM_01259 7.9e-39 ptsH G phosphocarrier protein Hpr
BEEBGOEM_01260 1.5e-222 icd 1.1.1.42 C Isocitrate dehydrogenase
BEEBGOEM_01261 5.1e-212 citZ 2.3.3.1 C Belongs to the citrate synthase family
BEEBGOEM_01262 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BEEBGOEM_01263 2.2e-34 nrdH O Glutaredoxin
BEEBGOEM_01264 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BEEBGOEM_01265 8.6e-184 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BEEBGOEM_01267 4.2e-71 L Transposase (IS116 IS110 IS902 family)
BEEBGOEM_01268 8.8e-60 L Transposase (IS116 IS110 IS902 family)
BEEBGOEM_01269 5.3e-165 ypuA S secreted protein
BEEBGOEM_01270 1.4e-71 yaeR E COG0346 Lactoylglutathione lyase and related lyases
BEEBGOEM_01271 1.7e-134 srtA 3.4.22.70 M Sortase (surface protein transpeptidase)
BEEBGOEM_01272 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BEEBGOEM_01273 1.1e-181 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
BEEBGOEM_01274 3.4e-258 noxE P NADH oxidase
BEEBGOEM_01275 1.9e-294 yfmM S abc transporter atp-binding protein
BEEBGOEM_01276 3.3e-82 XK27_01265 S ECF-type riboflavin transporter, S component
BEEBGOEM_01277 8.7e-85 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
BEEBGOEM_01278 4.5e-44 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
BEEBGOEM_01279 2e-86 S ECF-type riboflavin transporter, S component
BEEBGOEM_01281 5e-240 XK27_08130 K Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
BEEBGOEM_01282 2e-55 nrdD_1 1.1.98.6, 1.17.4.1 F Ribonucleoside-triphosphate reductase
BEEBGOEM_01285 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
BEEBGOEM_01286 4.6e-91 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
BEEBGOEM_01287 1.2e-196 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BEEBGOEM_01288 0.0 smc D Required for chromosome condensation and partitioning
BEEBGOEM_01289 8.4e-125 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
BEEBGOEM_01290 6.6e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BEEBGOEM_01291 7.3e-200 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BEEBGOEM_01292 2.4e-92 pat 2.3.1.183 M acetyltransferase
BEEBGOEM_01293 3e-13
BEEBGOEM_01294 6.3e-23
BEEBGOEM_01295 9e-278 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BEEBGOEM_01296 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
BEEBGOEM_01297 3.1e-127 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 E hydrolase
BEEBGOEM_01298 1.2e-62 bioY S biotin transmembrane transporter activity
BEEBGOEM_01299 9.8e-88 proW P Binding-protein-dependent transport system inner membrane component
BEEBGOEM_01300 1.5e-138 proV E abc transporter atp-binding protein
BEEBGOEM_01301 7.4e-169 proX M ABC transporter, substrate-binding protein, QAT family
BEEBGOEM_01302 3e-111 proWZ P ABC transporter (Permease
BEEBGOEM_01303 1.2e-280 hutH 4.3.1.3 E Histidine ammonia-lyase
BEEBGOEM_01304 1.4e-133 S Protein of unknown function (DUF917)
BEEBGOEM_01305 1.2e-48 S Protein of unknown function (DUF917)
BEEBGOEM_01306 1.3e-309 hutU 4.2.1.49 E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
BEEBGOEM_01307 1.6e-59 sdaAB 4.3.1.17 E L-serine dehydratase
BEEBGOEM_01308 4.4e-101 desR K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
BEEBGOEM_01309 1.5e-192 desK 2.7.13.3 T Histidine kinase
BEEBGOEM_01310 1.4e-133 yvfS V ABC-2 type transporter
BEEBGOEM_01311 8.7e-159 XK27_09825 V abc transporter atp-binding protein
BEEBGOEM_01315 6.6e-213 EGP Major facilitator Superfamily
BEEBGOEM_01316 7.2e-286 2.7.7.73, 2.7.7.80 E metalloendopeptidase activity
BEEBGOEM_01317 1.6e-140 2.7.7.73, 2.7.7.80 E metalloendopeptidase activity
BEEBGOEM_01318 4.6e-152 mutR K Transcriptional activator, Rgg GadR MutR family
BEEBGOEM_01319 4.6e-42 3.6.1.55 F NUDIX domain
BEEBGOEM_01320 1.4e-220 L Transposase
BEEBGOEM_01322 3.7e-122 S An automated process has identified a potential problem with this gene model
BEEBGOEM_01323 6.1e-26 XK27_09825 V 'abc transporter, ATP-binding protein
BEEBGOEM_01324 1.4e-15 liaI KT membrane
BEEBGOEM_01325 2.6e-30 liaI KT membrane
BEEBGOEM_01326 6.1e-93 XK27_05000 S metal cluster binding
BEEBGOEM_01327 0.0 V ABC transporter (permease)
BEEBGOEM_01328 1.9e-133 macB2 V ABC transporter, ATP-binding protein
BEEBGOEM_01329 6.2e-166 T Histidine kinase
BEEBGOEM_01330 4.6e-123 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
BEEBGOEM_01331 3.2e-78 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
BEEBGOEM_01333 2.1e-192 pbuX F xanthine permease
BEEBGOEM_01334 4.5e-247 norM V Multidrug efflux pump
BEEBGOEM_01335 2.2e-187 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BEEBGOEM_01336 1.7e-235 brnQ E Component of the transport system for branched-chain amino acids
BEEBGOEM_01337 9.4e-65 manA 5.3.1.8 G mannose-6-phosphate isomerase
BEEBGOEM_01338 8.2e-57 manA 5.3.1.8 G mannose-6-phosphate isomerase
BEEBGOEM_01339 4.8e-25 csbD K CsbD-like
BEEBGOEM_01341 4e-227 yfnA E amino acid
BEEBGOEM_01342 5.1e-110 XK27_02070 S nitroreductase
BEEBGOEM_01343 9.5e-150 1.13.11.2 S glyoxalase
BEEBGOEM_01344 5.6e-77 ywnA K Transcriptional regulator
BEEBGOEM_01345 9.5e-158 E Alpha/beta hydrolase of unknown function (DUF915)
BEEBGOEM_01346 1.9e-231 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BEEBGOEM_01347 1.4e-110 drgA C Nitroreductase
BEEBGOEM_01348 3e-102 yoaK S Protein of unknown function (DUF1275)
BEEBGOEM_01349 6.8e-161 yvgN C reductase
BEEBGOEM_01350 1.7e-179 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
BEEBGOEM_01351 3.6e-282 XK27_07020 S Belongs to the UPF0371 family
BEEBGOEM_01353 1.1e-37 BP1961 P nitric oxide dioxygenase activity
BEEBGOEM_01354 1.4e-54 K response regulator
BEEBGOEM_01355 9.3e-72 S Signal peptide protein, YSIRK family
BEEBGOEM_01357 4.5e-61
BEEBGOEM_01358 1.8e-270 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BEEBGOEM_01359 1e-137
BEEBGOEM_01360 5.3e-12 IQ PFAM AMP-dependent synthetase and ligase
BEEBGOEM_01361 2.7e-12 IQ PFAM AMP-dependent synthetase and ligase
BEEBGOEM_01362 5.8e-109 MA20_06410 E LysE type translocator
BEEBGOEM_01363 5.6e-08
BEEBGOEM_01364 2.7e-09
BEEBGOEM_01365 0.0 M family 8
BEEBGOEM_01367 5e-161 hrtB V MacB-like periplasmic core domain
BEEBGOEM_01368 1.1e-116 devA 3.6.3.25 V abc transporter atp-binding protein
BEEBGOEM_01369 1.1e-151 V MatE
BEEBGOEM_01371 3.9e-110 C Fe-S oxidoreductases
BEEBGOEM_01372 1.2e-176 EGP Major Facilitator Superfamily
BEEBGOEM_01373 5.5e-258 I radical SAM domain protein
BEEBGOEM_01375 6.5e-159 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
BEEBGOEM_01376 1.4e-150 L Integrase core domain protein
BEEBGOEM_01377 1.8e-87 L transposase activity
BEEBGOEM_01379 1.4e-84
BEEBGOEM_01380 0.0 sbcC L ATPase involved in DNA repair
BEEBGOEM_01381 1.3e-229 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
BEEBGOEM_01382 0.0 lacL 3.2.1.23 G -beta-galactosidase
BEEBGOEM_01383 0.0 lacS G transporter
BEEBGOEM_01384 2.4e-200 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
BEEBGOEM_01385 1.1e-194 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
BEEBGOEM_01386 1.3e-287 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
BEEBGOEM_01387 3.7e-221 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
BEEBGOEM_01388 2.3e-184 galR K Transcriptional regulator
BEEBGOEM_01389 2.7e-08 L Integrase core domain protein
BEEBGOEM_01390 1.2e-25 L transposition
BEEBGOEM_01391 3.5e-228 zmpB M M26 IgA1-specific Metallo-endopeptidase C-terminal region
BEEBGOEM_01392 5.1e-17 rtxA M M26 IgA1-specific Metallo-endopeptidase C-terminal region
BEEBGOEM_01393 2.5e-101 V abc transporter atp-binding protein
BEEBGOEM_01394 4.3e-40 V abc transporter atp-binding protein
BEEBGOEM_01395 0.0 gshF 6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
BEEBGOEM_01396 6.4e-62 L Transposase
BEEBGOEM_01397 7e-150 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
BEEBGOEM_01398 1.8e-33 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
BEEBGOEM_01399 1.7e-120 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
BEEBGOEM_01400 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
BEEBGOEM_01401 8.6e-187 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
BEEBGOEM_01402 1.9e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
BEEBGOEM_01403 5.8e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BEEBGOEM_01406 8.2e-114 vraR K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
BEEBGOEM_01407 1.9e-173 vraS 2.7.13.3 T Histidine kinase
BEEBGOEM_01408 9.1e-119 yvqF KT membrane
BEEBGOEM_01409 1.7e-305 prkC 2.7.11.1 KLT serine threonine protein kinase
BEEBGOEM_01410 9e-133 stp 3.1.3.16 T phosphatase
BEEBGOEM_01411 1.7e-246 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BEEBGOEM_01412 1e-173 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BEEBGOEM_01413 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BEEBGOEM_01414 2.7e-46 rpoZ 2.7.7.6 K DNA-directed 5'-3' RNA polymerase activity
BEEBGOEM_01415 9.8e-112 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
BEEBGOEM_01416 9.7e-213 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
BEEBGOEM_01417 1.8e-150 XK27_02985 S overlaps another CDS with the same product name
BEEBGOEM_01418 5.3e-147 supH S overlaps another CDS with the same product name
BEEBGOEM_01419 8.6e-63 yvoA_1 K Transcriptional
BEEBGOEM_01420 9.8e-121 skfE V abc transporter atp-binding protein
BEEBGOEM_01421 9e-131 V ATPase activity
BEEBGOEM_01422 4.3e-172 oppF P Belongs to the ABC transporter superfamily
BEEBGOEM_01423 2.2e-204 oppD P Belongs to the ABC transporter superfamily
BEEBGOEM_01424 2.4e-167 amiD P ABC transporter (Permease
BEEBGOEM_01425 1.1e-270 amiC P ABC transporter (Permease
BEEBGOEM_01426 0.0 amiA E ABC transporter, substrate-binding protein, family 5
BEEBGOEM_01427 8.1e-45 L Transposase
BEEBGOEM_01428 4.1e-158 L COG2801 Transposase and inactivated derivatives
BEEBGOEM_01429 1.2e-24 oppF P Belongs to the ABC transporter superfamily
BEEBGOEM_01430 5.5e-23 oppF P Belongs to the ABC transporter superfamily
BEEBGOEM_01431 2e-21 tatD L hydrolase, TatD family'
BEEBGOEM_01432 6.7e-218 oxlT P COG0477 Permeases of the major facilitator superfamily
BEEBGOEM_01433 4e-110 L PFAM Integrase catalytic region
BEEBGOEM_01434 9.3e-29 L transposition
BEEBGOEM_01435 1.4e-38 L transposase activity
BEEBGOEM_01436 3.7e-38 L transposase activity
BEEBGOEM_01437 1.4e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
BEEBGOEM_01438 9.8e-174 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
BEEBGOEM_01439 1.5e-152 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BEEBGOEM_01440 1.5e-121 yjbM 2.7.6.5 S Gtp pyrophosphokinase
BEEBGOEM_01441 5.8e-103 yjbK S Adenylate cyclase
BEEBGOEM_01442 2.1e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BEEBGOEM_01443 3.2e-206 iscS 2.8.1.7 E Cysteine desulfurase
BEEBGOEM_01444 9e-59 XK27_04120 S Putative amino acid metabolism
BEEBGOEM_01445 5.7e-118 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
BEEBGOEM_01446 1.6e-131 puuD T peptidase C26
BEEBGOEM_01447 6.2e-120 radC E Belongs to the UPF0758 family
BEEBGOEM_01448 0.0 rgpF M Rhamnan synthesis protein F
BEEBGOEM_01449 8.2e-196 rgpEc GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
BEEBGOEM_01450 8.7e-226 rgpD 3.6.3.38 P Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
BEEBGOEM_01451 1.1e-142 rgpC GM Transport permease protein
BEEBGOEM_01452 2.2e-179 rgpB GT2 M Glycosyltransferase, group 2 family protein
BEEBGOEM_01453 1.3e-226 rgpA GT4 M Domain of unknown function (DUF1972)
BEEBGOEM_01454 5.1e-195 tagF 2.7.8.12 M Glycosyl transferase, family 2
BEEBGOEM_01455 2.6e-220 amrA S polysaccharide biosynthetic process
BEEBGOEM_01456 5.3e-48 XK27_09090 S Uncharacterized conserved protein (DUF2304)
BEEBGOEM_01457 7.6e-126 ycbB S Glycosyl transferase family 2
BEEBGOEM_01458 1.2e-160 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
BEEBGOEM_01459 1.2e-231
BEEBGOEM_01460 1.6e-171 yfdH GT2 M COG0463, glycosyltransferases involved in cell wall biogenesis
BEEBGOEM_01461 5.4e-251 M Psort location CytoplasmicMembrane, score
BEEBGOEM_01462 3.4e-55 yitW K metal-sulfur cluster biosynthetic enzyme
BEEBGOEM_01463 8e-202 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
BEEBGOEM_01464 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
BEEBGOEM_01465 1.1e-46 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
BEEBGOEM_01466 1.2e-19 rpsU J Belongs to the bacterial ribosomal protein bS21 family
BEEBGOEM_01467 7.9e-135 gltS ET Belongs to the bacterial solute-binding protein 3 family
BEEBGOEM_01468 3.4e-200 arcT 2.6.1.1 E Aminotransferase
BEEBGOEM_01469 7.2e-136 ET ABC transporter
BEEBGOEM_01470 3.7e-143 ET Belongs to the bacterial solute-binding protein 3 family
BEEBGOEM_01471 2.9e-84 mutT 3.6.1.55 F Nudix family
BEEBGOEM_01472 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
BEEBGOEM_01474 1.2e-55 V CAAX protease self-immunity
BEEBGOEM_01475 2.6e-32 S CAAX amino terminal protease family protein
BEEBGOEM_01476 0.0 glnP P ABC-type amino acid transport signal transduction systems periplasmic component domain
BEEBGOEM_01477 1e-136 glnQ 3.6.3.21 E abc transporter atp-binding protein
BEEBGOEM_01478 2.4e-16 XK27_00735
BEEBGOEM_01479 1.4e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BEEBGOEM_01481 3.6e-134 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
BEEBGOEM_01484 5.5e-65 paaI Q protein possibly involved in aromatic compounds catabolism
BEEBGOEM_01485 6.6e-30 ycaO O OsmC-like protein
BEEBGOEM_01487 8.5e-154 EG Permeases of the drug metabolite transporter (DMT) superfamily
BEEBGOEM_01489 1.6e-112 csn2 S CRISPR-associated protein (Cas_Csn2)
BEEBGOEM_01490 2.6e-55 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BEEBGOEM_01491 1.5e-163 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BEEBGOEM_01492 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
BEEBGOEM_01493 7.4e-115 serB 3.1.3.3 E phosphoserine phosphatase
BEEBGOEM_01494 2.8e-302 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
BEEBGOEM_01495 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BEEBGOEM_01496 2.6e-109 3.1.3.18 S IA, variant 1
BEEBGOEM_01497 2.2e-117 lrgB M effector of murein hydrolase
BEEBGOEM_01498 2.2e-58 lrgA S Effector of murein hydrolase LrgA
BEEBGOEM_01500 5.4e-59 arsC 1.20.4.1 P Belongs to the ArsC family
BEEBGOEM_01501 1.5e-52 ogt 2.1.1.63, 3.2.2.20 L methylated-DNA-[protein]-cysteine S-methyltransferase activity
BEEBGOEM_01502 7e-220 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BEEBGOEM_01503 3.9e-104 wecD M Acetyltransferase GNAT family
BEEBGOEM_01504 1.3e-209 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BEEBGOEM_01505 2.6e-95 GK ROK family
BEEBGOEM_01506 8.1e-72 gloA 4.4.1.5 E Lactoylglutathione lyase
BEEBGOEM_01507 1.7e-47 XK27_08050 O stress-induced mitochondrial fusion
BEEBGOEM_01508 1.3e-19 XK27_08050 O HflC and HflK could regulate a protease
BEEBGOEM_01509 2.3e-206 potD P spermidine putrescine ABC transporter
BEEBGOEM_01510 3e-134 potC P ABC-type spermidine putrescine transport system, permease component II
BEEBGOEM_01511 3.7e-140 potB P ABC-type spermidine putrescine transport system, permease component I
BEEBGOEM_01512 6.2e-213 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
BEEBGOEM_01513 7.8e-171 murB 1.3.1.98 M cell wall formation
BEEBGOEM_01514 2.9e-87 folK 2.7.6.3, 4.1.2.25 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BEEBGOEM_01515 1.2e-61 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BEEBGOEM_01516 1.2e-298 amy 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
BEEBGOEM_01517 1.2e-146 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BEEBGOEM_01518 1e-99 folE 3.5.4.16 F gtp cyclohydrolase
BEEBGOEM_01519 0.0 ydaO E amino acid
BEEBGOEM_01520 1.1e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
BEEBGOEM_01521 4.1e-37 ylqC L Belongs to the UPF0109 family
BEEBGOEM_01522 2.4e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
BEEBGOEM_01523 6.9e-172 tehB 2.1.1.265 PQ tellurite resistance protein tehb
BEEBGOEM_01524 8.2e-159 xth 3.1.11.2 L exodeoxyribonuclease III
BEEBGOEM_01525 2.1e-74 S QueT transporter
BEEBGOEM_01526 1.9e-55 L Transposase
BEEBGOEM_01527 5.7e-186 yegS 2.7.1.107 I Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
BEEBGOEM_01528 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BEEBGOEM_01529 3.7e-85 ccl S cog cog4708
BEEBGOEM_01530 7.4e-164 rbn E Belongs to the UPF0761 family
BEEBGOEM_01531 1.5e-166 map 3.4.11.18 E Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed
BEEBGOEM_01532 3.3e-231 ytoI K transcriptional regulator containing CBS domains
BEEBGOEM_01533 2.4e-98 XK27_07830 2.3.1.128 J Acetyltransferase GNAT Family
BEEBGOEM_01534 1e-232 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BEEBGOEM_01535 0.0 comEC S Competence protein ComEC
BEEBGOEM_01536 2.2e-96 comEA L COG1555 DNA uptake protein and related DNA-binding proteins
BEEBGOEM_01537 8.3e-142 plsC 2.3.1.51 I Acyltransferase
BEEBGOEM_01538 1.7e-77 nodB3 G polysaccharide deacetylase
BEEBGOEM_01539 2.3e-139 yabB 2.1.1.223 L Methyltransferase
BEEBGOEM_01540 1e-41 yazA L endonuclease containing a URI domain
BEEBGOEM_01542 3.2e-252 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
BEEBGOEM_01543 2.3e-154 corA P CorA-like protein
BEEBGOEM_01544 1.9e-62 yjqA S Bacterial PH domain
BEEBGOEM_01545 7.8e-100 thiT S Thiamine transporter
BEEBGOEM_01546 2.1e-157 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
BEEBGOEM_01547 1.6e-200 yjbB G Permeases of the major facilitator superfamily
BEEBGOEM_01548 3.1e-300 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
BEEBGOEM_01549 7.9e-120 ywaF S Integral membrane protein (intg_mem_TP0381)
BEEBGOEM_01550 1.5e-258 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
BEEBGOEM_01554 1.1e-155 cjaA ET ABC transporter substrate-binding protein
BEEBGOEM_01555 1.7e-134 glnQ 3.6.3.21 E abc transporter atp-binding protein
BEEBGOEM_01556 3e-106 P ABC transporter (Permease
BEEBGOEM_01557 6e-115 papP P ABC transporter (Permease
BEEBGOEM_01558 1.7e-193 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
BEEBGOEM_01559 4.7e-31 copZ 2.7.7.77 P Heavy metal-associated domain protein
BEEBGOEM_01560 0.0 copA 3.6.3.54 P P-type ATPase
BEEBGOEM_01561 2.7e-73 copY K Copper transport repressor, CopY TcrY family
BEEBGOEM_01562 2.1e-143 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
BEEBGOEM_01563 2.1e-227 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
BEEBGOEM_01564 3e-99 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E belongs to the TrpF family
BEEBGOEM_01565 1.9e-133 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
BEEBGOEM_01566 1.5e-178 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BEEBGOEM_01567 2.3e-104 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH anthranilate
BEEBGOEM_01568 1.5e-255 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BEEBGOEM_01569 1.6e-55
BEEBGOEM_01570 0.0 ctpE P E1-E2 ATPase
BEEBGOEM_01571 6.1e-27
BEEBGOEM_01572 1.2e-43 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BEEBGOEM_01573 5.1e-47 L transposase activity
BEEBGOEM_01574 5.3e-119 K transcriptional regulator, MerR family
BEEBGOEM_01575 1.3e-105 dnaQ 2.7.7.7 L DNA polymerase III
BEEBGOEM_01576 9.1e-42 WQ51_02910 S Protein of unknown function, DUF536
BEEBGOEM_01577 7.4e-64 XK27_02560 S cog cog2151
BEEBGOEM_01578 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
BEEBGOEM_01579 7.7e-227 ytfP S Flavoprotein
BEEBGOEM_01581 3.1e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
BEEBGOEM_01582 1.2e-151 ytmP 2.7.1.89 M Phosphotransferase
BEEBGOEM_01583 1.6e-183 ecsB U ABC transporter
BEEBGOEM_01584 2.3e-133 ecsA V abc transporter atp-binding protein
BEEBGOEM_01585 5e-72 hit FG Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
BEEBGOEM_01586 4.8e-11
BEEBGOEM_01587 6.5e-55
BEEBGOEM_01588 0.0 clpL O ATP-dependent Clp protease ATP-binding subunit
BEEBGOEM_01589 1.2e-202 ylbM S Belongs to the UPF0348 family
BEEBGOEM_01590 2e-140 yqeM Q Methyltransferase domain protein
BEEBGOEM_01591 6e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
BEEBGOEM_01592 1.4e-107 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
BEEBGOEM_01593 3.1e-118 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BEEBGOEM_01594 3.5e-49 yhbY J RNA-binding protein
BEEBGOEM_01595 2.4e-214 yqeH S in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
BEEBGOEM_01596 1.8e-98 yqeG S hydrolase of the HAD superfamily
BEEBGOEM_01597 6.7e-154 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
BEEBGOEM_01598 4e-59
BEEBGOEM_01599 8.7e-273 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BEEBGOEM_01600 1.6e-269 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
BEEBGOEM_01601 1.4e-47 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BEEBGOEM_01602 9.8e-25 2.4.1.52 GT4 M transferase activity, transferring glycosyl groups
BEEBGOEM_01603 6.3e-31 M lipopolysaccharide 3-alpha-galactosyltransferase activity
BEEBGOEM_01604 1e-148 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
BEEBGOEM_01605 5.1e-77 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
BEEBGOEM_01606 3.6e-96 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BEEBGOEM_01607 2.1e-154 hlpA M Belongs to the NlpA lipoprotein family
BEEBGOEM_01608 3.4e-100 pncA Q isochorismatase
BEEBGOEM_01609 1.2e-140 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
BEEBGOEM_01610 6.2e-240 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase
BEEBGOEM_01611 2.4e-75 XK27_03180 T universal stress protein
BEEBGOEM_01614 2e-157 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BEEBGOEM_01615 2e-239 hlyX S COG1253 Hemolysins and related proteins containing CBS domains
BEEBGOEM_01616 2.4e-144 modF 3.6.3.21, 3.6.3.34 P abc transporter atp-binding protein
BEEBGOEM_01617 0.0 yjcE P NhaP-type Na H and K H antiporters
BEEBGOEM_01619 1.4e-98 ytqB 2.1.1.176 J (SAM)-dependent
BEEBGOEM_01620 1.3e-184 yhcC S radical SAM protein
BEEBGOEM_01621 8.4e-196 ylbL T Belongs to the peptidase S16 family
BEEBGOEM_01622 2e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BEEBGOEM_01623 5.1e-93 rsmD 2.1.1.171 L Methyltransferase
BEEBGOEM_01624 1.9e-172 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
BEEBGOEM_01625 6.1e-08 S Protein of unknown function (DUF4059)
BEEBGOEM_01626 1.3e-131 tcyN 3.6.3.21 E abc transporter atp-binding protein
BEEBGOEM_01627 1.4e-159 yxeN P ABC transporter (Permease
BEEBGOEM_01628 8.8e-153 yxeM ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
BEEBGOEM_01630 1.3e-204 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BEEBGOEM_01631 0.0 pflB 2.3.1.54 C formate acetyltransferase'
BEEBGOEM_01632 1.8e-147 cah 4.2.1.1 P carbonic anhydrase
BEEBGOEM_01633 2.1e-85 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
BEEBGOEM_01634 7.2e-46 hsdS_1 3.1.21.3 V type I restriction modification DNA specificity domain
BEEBGOEM_01635 1.4e-33 D nuclear chromosome segregation
BEEBGOEM_01636 1.5e-127 ybbM S transport system, permease component
BEEBGOEM_01637 4.4e-115 ybbL S abc transporter atp-binding protein
BEEBGOEM_01638 4.5e-185 ampC V COG1680 Beta-lactamase class C and other penicillin binding proteins
BEEBGOEM_01639 4.6e-140 cppA E CppA N-terminal
BEEBGOEM_01640 5e-44 V CAAX protease self-immunity
BEEBGOEM_01641 2.3e-164 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
BEEBGOEM_01642 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
BEEBGOEM_01645 3e-47 spiA K sequence-specific DNA binding
BEEBGOEM_01646 2.9e-28 blpT
BEEBGOEM_01647 6.7e-98 blpT
BEEBGOEM_01648 4.7e-117 L Transposase
BEEBGOEM_01649 1.2e-165 L integrase core domain
BEEBGOEM_01654 4.3e-25 S Bacteriocin class II with double-glycine leader peptide
BEEBGOEM_01657 4.4e-132 agrA KT phosphorelay signal transduction system
BEEBGOEM_01658 1.4e-237 blpH 2.7.13.3 T protein histidine kinase activity
BEEBGOEM_01660 4e-235 mesE M Transport protein ComB
BEEBGOEM_01661 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
BEEBGOEM_01662 0.0 mdlB V abc transporter atp-binding protein
BEEBGOEM_01663 0.0 mdlA V abc transporter atp-binding protein
BEEBGOEM_01665 1.7e-93 XK27_09885 V Glycopeptide antibiotics resistance protein
BEEBGOEM_01666 7.9e-224 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
BEEBGOEM_01667 2.4e-66 yutD J protein conserved in bacteria
BEEBGOEM_01668 4.8e-268 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
BEEBGOEM_01670 1.1e-250 L Transposase
BEEBGOEM_01671 3.2e-221 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
BEEBGOEM_01672 6.3e-185 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BEEBGOEM_01673 0.0 ftsI 3.4.16.4 M penicillin-binding protein
BEEBGOEM_01674 8.1e-46 ftsL D cell division protein FtsL
BEEBGOEM_01675 3.9e-173 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
BEEBGOEM_01676 2.2e-85
BEEBGOEM_01677 3.4e-58
BEEBGOEM_01678 2.8e-21 yhaI J Protein of unknown function (DUF805)
BEEBGOEM_01679 4.5e-18 D nuclear chromosome segregation
BEEBGOEM_01680 6.9e-210 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BEEBGOEM_01681 4.4e-141 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BEEBGOEM_01682 9.2e-284 XK27_00765
BEEBGOEM_01683 2.1e-129 ecsA_2 V abc transporter atp-binding protein
BEEBGOEM_01684 9.3e-122 S Protein of unknown function (DUF554)
BEEBGOEM_01685 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
BEEBGOEM_01686 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
BEEBGOEM_01687 3.4e-57 liaI S membrane
BEEBGOEM_01688 5.4e-10 XK27_02470 K LytTr DNA-binding domain protein
BEEBGOEM_01689 8.5e-68 KT response to antibiotic
BEEBGOEM_01690 3.5e-17 KT response to antibiotic
BEEBGOEM_01691 1.6e-79 yebC M Membrane
BEEBGOEM_01692 2.9e-18 yebC M Membrane
BEEBGOEM_01693 2.5e-261 XK27_03190 5.2.1.8 S hydrolases of the HAD superfamily
BEEBGOEM_01694 1.5e-172 ansA 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
BEEBGOEM_01695 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BEEBGOEM_01696 1.5e-184 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BEEBGOEM_01697 4.1e-62 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
BEEBGOEM_01698 1.1e-197 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BEEBGOEM_01699 2.9e-198 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BEEBGOEM_01700 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
BEEBGOEM_01702 3e-189 manA 5.3.1.8 G mannose-6-phosphate isomerase
BEEBGOEM_01703 4.1e-172 scrK 2.7.1.2, 2.7.1.4 GK Fructokinase
BEEBGOEM_01704 0.0 scrA 2.7.1.211 G pts system
BEEBGOEM_01705 4.1e-291 scrB 3.2.1.26 GH32 G invertase
BEEBGOEM_01706 1.7e-179 scrR K Transcriptional
BEEBGOEM_01707 2.1e-73 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BEEBGOEM_01708 3.4e-62 yqhY S protein conserved in bacteria
BEEBGOEM_01709 9.3e-98 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BEEBGOEM_01710 1.1e-83 comEB 3.5.4.12 F ComE operon protein 2
BEEBGOEM_01711 7.2e-192 pepP 3.4.11.9, 3.4.13.9 E Belongs to the peptidase M24B family
BEEBGOEM_01714 7.7e-11 V 'abc transporter, ATP-binding protein
BEEBGOEM_01717 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BEEBGOEM_01718 2e-169 corA P COG0598 Mg2 and Co2 transporters
BEEBGOEM_01719 3.1e-124 XK27_01040 S Pfam PF06570
BEEBGOEM_01721 9.7e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BEEBGOEM_01722 2.7e-91 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
BEEBGOEM_01723 3.9e-47 rpsF J Binds together with S18 to 16S ribosomal RNA
BEEBGOEM_01724 3.6e-41 XK27_05745
BEEBGOEM_01725 2.5e-230 mutY L A G-specific adenine glycosylase
BEEBGOEM_01730 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BEEBGOEM_01731 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
BEEBGOEM_01732 1e-93 cvpA S toxin biosynthetic process
BEEBGOEM_01733 2.3e-13 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
BEEBGOEM_01734 4.7e-160 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BEEBGOEM_01735 1.3e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
BEEBGOEM_01736 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
BEEBGOEM_01737 8.8e-48 azlD E branched-chain amino acid
BEEBGOEM_01738 1.8e-114 azlC E AzlC protein
BEEBGOEM_01739 1.9e-186 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BEEBGOEM_01740 1.3e-73 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
BEEBGOEM_01741 5.6e-121 yeaZ 2.3.1.234 O COG1214, inactive homolog of metal-dependent proteases
BEEBGOEM_01742 2.5e-33 ykzG S Belongs to the UPF0356 family
BEEBGOEM_01743 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BEEBGOEM_01744 2.7e-40 pscB M CHAP domain protein
BEEBGOEM_01745 1.5e-263 glnA 6.3.1.2 E glutamine synthetase
BEEBGOEM_01746 8.5e-63 glnR K Transcriptional regulator
BEEBGOEM_01747 1.3e-87 S Fusaric acid resistance protein-like
BEEBGOEM_01748 1.5e-12
BEEBGOEM_01749 3.1e-30
BEEBGOEM_01750 2e-222 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
BEEBGOEM_01751 6e-86 L Transposase
BEEBGOEM_01752 1.6e-55 L transposition
BEEBGOEM_01753 1.9e-86 L Integrase core domain protein
BEEBGOEM_01754 1.8e-187 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
BEEBGOEM_01755 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BEEBGOEM_01756 6.7e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
BEEBGOEM_01757 2.3e-69 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BEEBGOEM_01758 5.3e-142 purR 2.4.2.7 F operon repressor
BEEBGOEM_01759 1.2e-177 cbf S 3'-5' exoribonuclease yhaM
BEEBGOEM_01760 6.9e-173 rmuC S RmuC domain protein
BEEBGOEM_01761 2.4e-118 thiN 2.7.6.2 H thiamine pyrophosphokinase
BEEBGOEM_01762 3e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
BEEBGOEM_01763 4.1e-161 rsgA 3.1.3.100 G One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
BEEBGOEM_01765 6.2e-157 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
BEEBGOEM_01766 1.1e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BEEBGOEM_01767 1.6e-143 tatD L Hydrolase, tatd
BEEBGOEM_01768 1.1e-50 trxA O Belongs to the thioredoxin family
BEEBGOEM_01769 1.9e-141 S Macro domain protein
BEEBGOEM_01770 2e-09 L thioesterase
BEEBGOEM_01771 2.2e-54 bta 1.8.1.8 CO cell redox homeostasis
BEEBGOEM_01775 6.3e-226 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
BEEBGOEM_01776 1.1e-83 L Transposase
BEEBGOEM_01777 1e-13 rpmH J Ribosomal protein L34
BEEBGOEM_01778 2e-186 jag S RNA-binding protein
BEEBGOEM_01779 7.5e-141 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BEEBGOEM_01780 5.9e-55 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
BEEBGOEM_01781 4.1e-264 argH 4.3.2.1 E Argininosuccinate lyase
BEEBGOEM_01782 2e-230 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
BEEBGOEM_01783 2.1e-282 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BEEBGOEM_01784 6.7e-81 amiA E transmembrane transport
BEEBGOEM_01785 7.3e-69 amiA E transmembrane transport
BEEBGOEM_01786 4.8e-120 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
BEEBGOEM_01787 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BEEBGOEM_01788 9.2e-51 S Protein of unknown function (DUF3397)
BEEBGOEM_01789 1.2e-165 L integrase core domain
BEEBGOEM_01790 3.9e-122 L Transposase
BEEBGOEM_01791 2e-88 cah 4.2.1.1 P Reversible hydration of carbon dioxide
BEEBGOEM_01792 7.3e-59 WQ51_05710 S Mitochondrial biogenesis AIM24
BEEBGOEM_01793 6.2e-12 WQ51_05710 S Mitochondrial biogenesis AIM24
BEEBGOEM_01794 1.8e-226 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BEEBGOEM_01795 1.1e-80 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
BEEBGOEM_01796 4.7e-20 XK27_09620 S FMN reductase (NADPH) activity
BEEBGOEM_01797 6.2e-76 XK27_09620 S reductase
BEEBGOEM_01798 1.5e-220 XK27_09615 C reductase
BEEBGOEM_01799 2.5e-116 fnt P Formate nitrite transporter
BEEBGOEM_01800 1.3e-83 XK27_08585 S Psort location CytoplasmicMembrane, score
BEEBGOEM_01801 4.4e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
BEEBGOEM_01802 1.6e-168 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
BEEBGOEM_01803 7.5e-118 gluP 3.4.21.105 O membrane protein (homolog of Drosophila rhomboid)
BEEBGOEM_01804 8.5e-93 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BEEBGOEM_01805 1.3e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
BEEBGOEM_01806 8.1e-59 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
BEEBGOEM_01807 1.9e-46 S glycolate biosynthetic process
BEEBGOEM_01808 1.5e-64 S phosphatase activity
BEEBGOEM_01809 4.1e-158 rrmA 2.1.1.187 Q methyltransferase
BEEBGOEM_01812 1e-90 tadA 3.5.4.1, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
BEEBGOEM_01813 5.1e-66 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
BEEBGOEM_01814 1.9e-36 yeeD O sulfur carrier activity
BEEBGOEM_01815 2e-109 yeeE S Sulphur transport
BEEBGOEM_01816 2.6e-68 yeeE S Sulphur transport
BEEBGOEM_01817 7.9e-114 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
BEEBGOEM_01818 2.1e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
BEEBGOEM_01819 4.1e-09 S Domain of unknown function (DUF4651)
BEEBGOEM_01820 2e-205 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
BEEBGOEM_01821 4.4e-130 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BEEBGOEM_01822 1.6e-249 L Transposase
BEEBGOEM_01823 8.7e-111 S CAAX amino terminal protease family protein
BEEBGOEM_01825 1.1e-66 V CAAX protease self-immunity
BEEBGOEM_01826 2.6e-26 lanR K sequence-specific DNA binding
BEEBGOEM_01827 2.9e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BEEBGOEM_01828 1.1e-175 ytxK 2.1.1.72 L DNA methylase
BEEBGOEM_01829 2e-12 comGF U Putative Competence protein ComGF
BEEBGOEM_01830 1.5e-71 comGF U Competence protein ComGF
BEEBGOEM_01831 1.4e-15 NU Type II secretory pathway pseudopilin
BEEBGOEM_01832 1.8e-57 cglD NU Competence protein
BEEBGOEM_01833 8.5e-43 comGC U Required for transformation and DNA binding
BEEBGOEM_01834 9.1e-156 cglB U protein transport across the cell outer membrane
BEEBGOEM_01835 6e-174 comGA NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BEEBGOEM_01836 2.9e-68 S cog cog4699
BEEBGOEM_01837 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BEEBGOEM_01838 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BEEBGOEM_01839 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
BEEBGOEM_01840 2.1e-238 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BEEBGOEM_01841 1.5e-194 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BEEBGOEM_01842 7.7e-77 ilvN 2.2.1.6 E Acetolactate synthase
BEEBGOEM_01843 0.0 ilvB 2.2.1.6 EH Acetolactate synthase
BEEBGOEM_01844 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
BEEBGOEM_01845 7.6e-305 yloV S kinase related to dihydroxyacetone kinase
BEEBGOEM_01846 1.8e-57 asp S cog cog1302
BEEBGOEM_01847 3.2e-226 norN V Mate efflux family protein
BEEBGOEM_01848 1.2e-277 thrC 4.2.3.1 E Threonine synthase
BEEBGOEM_01849 6.1e-64 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
BEEBGOEM_01850 4.1e-22 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
BEEBGOEM_01851 7.3e-74 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
BEEBGOEM_01852 1.2e-133 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
BEEBGOEM_01853 2.1e-52 adhE 1.1.1.1, 1.2.1.10 C Dehydrogenase
BEEBGOEM_01854 0.0 pepO 3.4.24.71 O Peptidase family M13
BEEBGOEM_01855 1.5e-69 treC 3.2.1.93 GH13 G COG0366 Glycosidases
BEEBGOEM_01856 5.9e-66 treC 3.2.1.93 GH13 G COG0366 Glycosidases
BEEBGOEM_01857 1.4e-54 treB 2.7.1.201 G PTS System
BEEBGOEM_01858 5.8e-21 treR K DNA-binding transcription factor activity
BEEBGOEM_01859 1.2e-85 treR K trehalose operon
BEEBGOEM_01860 3.3e-95 ywlG S Belongs to the UPF0340 family
BEEBGOEM_01863 2e-35 L PFAM Integrase, catalytic core
BEEBGOEM_01864 2e-94 L PFAM Integrase, catalytic core
BEEBGOEM_01865 3.3e-46 K Putative DNA-binding domain
BEEBGOEM_01866 2.5e-13 2.3.1.82 M Acetyltransferase GNAT Family
BEEBGOEM_01867 1.2e-126 gltT C Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
BEEBGOEM_01868 6.4e-136 HJ the current gene model (or a revised gene model) may contain a frame shift
BEEBGOEM_01873 1e-39
BEEBGOEM_01874 6.5e-31
BEEBGOEM_01875 5e-31 S Hypothetical protein (DUF2513)
BEEBGOEM_01876 7.7e-13
BEEBGOEM_01878 5.7e-217 S MvaI/BcnI restriction endonuclease family
BEEBGOEM_01880 2.2e-282 dcm 2.1.1.37 H C-5 cytosine-specific DNA methylase
BEEBGOEM_01881 9e-164 fba 4.1.2.13, 4.1.2.29 G aldolase
BEEBGOEM_01883 6.7e-110 6.3.2.2 H ergothioneine biosynthetic process
BEEBGOEM_01884 1.5e-65 6.3.2.2 H gamma-glutamylcysteine synthetase
BEEBGOEM_01885 3.2e-12 6.3.2.2 H gamma-glutamylcysteine synthetase
BEEBGOEM_01886 3.3e-09 L PFAM Integrase, catalytic core
BEEBGOEM_01887 1.8e-111 L PFAM Integrase, catalytic core
BEEBGOEM_01888 3.3e-62 rplQ J ribosomal protein l17
BEEBGOEM_01889 4.8e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BEEBGOEM_01890 9.6e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BEEBGOEM_01891 4e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BEEBGOEM_01892 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
BEEBGOEM_01893 2.7e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BEEBGOEM_01894 9.2e-121 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
BEEBGOEM_01895 2.1e-230 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
BEEBGOEM_01896 4.4e-58 rplO J binds to the 23S rRNA
BEEBGOEM_01897 2.5e-23 rpmD J ribosomal protein l30
BEEBGOEM_01898 1.7e-79 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BEEBGOEM_01899 1.9e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BEEBGOEM_01900 2.3e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BEEBGOEM_01901 1.2e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BEEBGOEM_01902 1.5e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BEEBGOEM_01903 1.6e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BEEBGOEM_01904 1.4e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BEEBGOEM_01905 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BEEBGOEM_01906 6e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BEEBGOEM_01907 2.7e-26 rpmC J Belongs to the universal ribosomal protein uL29 family
BEEBGOEM_01908 7.2e-71 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BEEBGOEM_01909 2.1e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BEEBGOEM_01910 7.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BEEBGOEM_01911 4.9e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BEEBGOEM_01912 8.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BEEBGOEM_01913 2.4e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
BEEBGOEM_01914 5.7e-104 rplD J Forms part of the polypeptide exit tunnel
BEEBGOEM_01915 1.1e-110 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BEEBGOEM_01916 1.3e-48 rpsJ J Involved in the binding of tRNA to the ribosomes
BEEBGOEM_01917 7.8e-188 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
BEEBGOEM_01918 0.0 XK27_09800 I Acyltransferase
BEEBGOEM_01919 1.7e-35 XK27_09805 S MORN repeat protein
BEEBGOEM_01920 1.8e-80 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BEEBGOEM_01921 4.1e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BEEBGOEM_01922 1.8e-50 adk 2.7.4.3 F topology modulation protein
BEEBGOEM_01923 7.6e-130 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
BEEBGOEM_01924 9.7e-30 S Domain of unknown function (DUF4649)
BEEBGOEM_01925 2.4e-13 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
BEEBGOEM_01926 3.2e-56 Z012_04635 K sequence-specific DNA binding
BEEBGOEM_01927 1.4e-59 Z012_04635 K sequence-specific DNA binding
BEEBGOEM_01929 7.5e-109 C Radical SAM
BEEBGOEM_01930 3e-104 C Radical SAM
BEEBGOEM_01931 3.9e-287 V ABC transporter transmembrane region
BEEBGOEM_01932 1e-155 L Replication initiation factor
BEEBGOEM_01933 1.9e-18 S Domain of unknown function (DUF3173)
BEEBGOEM_01934 1.7e-215 int L Belongs to the 'phage' integrase family
BEEBGOEM_01936 5.2e-237 rarA L ATPase related to the helicase subunit of the Holliday junction resolvase
BEEBGOEM_01937 8.4e-27 rpmB J Belongs to the bacterial ribosomal protein bL28 family
BEEBGOEM_01938 2.8e-44 yrzL S Belongs to the UPF0297 family
BEEBGOEM_01939 1.2e-70 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BEEBGOEM_01940 4.2e-44 yrzB S Belongs to the UPF0473 family
BEEBGOEM_01941 2.8e-299 ccs S the current gene model (or a revised gene model) may contain a frame shift
BEEBGOEM_01942 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
BEEBGOEM_01943 7.5e-14
BEEBGOEM_01944 2.6e-91 XK27_10930 K acetyltransferase
BEEBGOEM_01945 3.7e-116 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BEEBGOEM_01946 1.8e-147 yaaA S Belongs to the UPF0246 family
BEEBGOEM_01947 9.3e-167 XK27_01785 S cog cog1284
BEEBGOEM_01948 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
BEEBGOEM_01950 1.6e-241 hisS 6.1.1.21 J histidyl-tRNA synthetase
BEEBGOEM_01951 1.4e-53 metE 2.1.1.14 E Methionine synthase
BEEBGOEM_01952 5.2e-55 metE 2.1.1.14 E Methionine synthase
BEEBGOEM_01953 1.4e-36 metE 2.1.1.14 E Methionine synthase
BEEBGOEM_01954 1e-24 rpmF J Belongs to the bacterial ribosomal protein bL32 family
BEEBGOEM_01955 6.7e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
BEEBGOEM_01956 2.4e-28
BEEBGOEM_01957 0.0 V Type II restriction enzyme, methylase subunits
BEEBGOEM_01958 3.2e-10 S Sigma-70, region 4
BEEBGOEM_01959 1.7e-35
BEEBGOEM_01960 1.5e-160 D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
BEEBGOEM_01961 2e-20
BEEBGOEM_01962 2.1e-82 S Plasmid replication protein
BEEBGOEM_01963 5.9e-20 S MerR HTH family regulatory protein
BEEBGOEM_01964 5.1e-184 sip L Belongs to the 'phage' integrase family
BEEBGOEM_01967 1.5e-49 yegS 2.7.1.107 I lipid kinase activity
BEEBGOEM_01968 2.7e-95 S Hydrophobic domain protein
BEEBGOEM_01970 3.7e-27 S Membrane
BEEBGOEM_01971 9.1e-101
BEEBGOEM_01972 1.8e-23 S Small integral membrane protein
BEEBGOEM_01973 3.1e-85 M Protein conserved in bacteria
BEEBGOEM_01974 1.1e-11 K CsbD-like
BEEBGOEM_01975 3.4e-13 nudL L hydrolase
BEEBGOEM_01976 4e-19 K negative regulation of transcription, DNA-templated
BEEBGOEM_01977 1.7e-23 K negative regulation of transcription, DNA-templated
BEEBGOEM_01979 1.8e-19 XK27_06920 S Protein of unknown function (DUF1700)
BEEBGOEM_01980 1.2e-87 S Putative adhesin
BEEBGOEM_01981 3.9e-161 XK27_06930 V domain protein
BEEBGOEM_01982 6.4e-96 XK27_06935 K transcriptional regulator
BEEBGOEM_01983 4.8e-55 ypaA M Membrane
BEEBGOEM_01984 2.7e-08
BEEBGOEM_01985 9.8e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
BEEBGOEM_01986 8.2e-48 veg S Biofilm formation stimulator VEG
BEEBGOEM_01987 1.5e-245 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
BEEBGOEM_01988 3.9e-70 rplI J binds to the 23S rRNA
BEEBGOEM_01989 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
BEEBGOEM_01990 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
BEEBGOEM_01991 1.5e-77 F NUDIX domain
BEEBGOEM_01992 8.6e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
BEEBGOEM_01993 0.0 S Bacterial membrane protein, YfhO
BEEBGOEM_01994 1.7e-63 isaA GH23 M Immunodominant staphylococcal antigen A
BEEBGOEM_01995 5.3e-85 lytE M LysM domain protein
BEEBGOEM_01996 2e-138 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BEEBGOEM_01997 2e-152 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BEEBGOEM_01998 1.5e-152 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BEEBGOEM_01999 3.1e-90 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BEEBGOEM_02000 6.3e-138 ymfM S sequence-specific DNA binding
BEEBGOEM_02001 1.2e-241 ymfH S Peptidase M16
BEEBGOEM_02002 1.3e-156 ymfF S Peptidase M16
BEEBGOEM_02003 1.7e-66 ymfF S Peptidase M16
BEEBGOEM_02004 1.6e-45 yaaA S S4 domain protein YaaA
BEEBGOEM_02005 5.9e-205 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BEEBGOEM_02006 4.3e-275 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
BEEBGOEM_02007 3.1e-192 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
BEEBGOEM_02008 4.2e-153 yvjA S membrane
BEEBGOEM_02009 6.7e-306 ybiT S abc transporter atp-binding protein
BEEBGOEM_02010 0.0 XK27_10405 S Bacterial membrane protein YfhO
BEEBGOEM_02014 6.2e-120 yoaK S Psort location CytoplasmicMembrane, score
BEEBGOEM_02015 1.1e-86 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BEEBGOEM_02016 2.6e-193 htrA 3.4.21.107 O Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain'
BEEBGOEM_02017 8.5e-134 parB K Belongs to the ParB family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)