ORF_ID e_value Gene_name EC_number CAZy COGs Description
JIIJFFAK_00001 1.3e-137 L Transposase
JIIJFFAK_00002 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JIIJFFAK_00003 3.4e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
JIIJFFAK_00004 5e-240 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
JIIJFFAK_00005 1.3e-240 XK27_09285 3.5.2.6 V Beta-lactamase enzyme family
JIIJFFAK_00007 2.7e-61 divIC D Septum formation initiator
JIIJFFAK_00008 1.7e-39 yabO J Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
JIIJFFAK_00009 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JIIJFFAK_00010 1.4e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
JIIJFFAK_00011 1.1e-203 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
JIIJFFAK_00012 1.1e-29 yyzM S Protein conserved in bacteria
JIIJFFAK_00013 6.3e-202 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
JIIJFFAK_00014 1.3e-257 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JIIJFFAK_00015 8.5e-134 parB K Belongs to the ParB family
JIIJFFAK_00016 2.6e-193 htrA 3.4.21.107 O Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain'
JIIJFFAK_00017 1.1e-86 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
JIIJFFAK_00018 6.2e-120 yoaK S Psort location CytoplasmicMembrane, score
JIIJFFAK_00022 0.0 XK27_10405 S Bacterial membrane protein YfhO
JIIJFFAK_00023 6.7e-306 ybiT S abc transporter atp-binding protein
JIIJFFAK_00024 4.2e-153 yvjA S membrane
JIIJFFAK_00025 3.1e-192 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
JIIJFFAK_00026 4.3e-275 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
JIIJFFAK_00027 5.9e-205 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JIIJFFAK_00028 1.6e-45 yaaA S S4 domain protein YaaA
JIIJFFAK_00029 1.7e-66 ymfF S Peptidase M16
JIIJFFAK_00030 1.3e-156 ymfF S Peptidase M16
JIIJFFAK_00031 1.2e-241 ymfH S Peptidase M16
JIIJFFAK_00032 6.3e-138 ymfM S sequence-specific DNA binding
JIIJFFAK_00033 3.1e-90 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JIIJFFAK_00034 1.5e-152 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JIIJFFAK_00035 2e-152 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JIIJFFAK_00036 2e-138 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JIIJFFAK_00037 5.3e-85 lytE M LysM domain protein
JIIJFFAK_00038 1.7e-63 isaA GH23 M Immunodominant staphylococcal antigen A
JIIJFFAK_00039 0.0 S Bacterial membrane protein, YfhO
JIIJFFAK_00040 5.6e-219 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
JIIJFFAK_00041 1.5e-77 F NUDIX domain
JIIJFFAK_00042 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
JIIJFFAK_00043 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
JIIJFFAK_00044 3.9e-70 rplI J binds to the 23S rRNA
JIIJFFAK_00045 1.5e-245 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
JIIJFFAK_00046 8.2e-48 veg S Biofilm formation stimulator VEG
JIIJFFAK_00047 9.8e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
JIIJFFAK_00048 2.7e-08
JIIJFFAK_00049 4.8e-55 ypaA M Membrane
JIIJFFAK_00050 1.9e-95 XK27_06935 K transcriptional regulator
JIIJFFAK_00051 3.9e-161 XK27_06930 V domain protein
JIIJFFAK_00052 1.2e-87 S Putative adhesin
JIIJFFAK_00053 1.8e-19 XK27_06920 S Protein of unknown function (DUF1700)
JIIJFFAK_00055 1.7e-23 K negative regulation of transcription, DNA-templated
JIIJFFAK_00056 4e-19 K negative regulation of transcription, DNA-templated
JIIJFFAK_00057 3.4e-13 nudL L hydrolase
JIIJFFAK_00058 1.1e-11 K CsbD-like
JIIJFFAK_00059 3.1e-85 M Protein conserved in bacteria
JIIJFFAK_00060 1.8e-23 S Small integral membrane protein
JIIJFFAK_00061 9.1e-101
JIIJFFAK_00062 3.7e-27 S Membrane
JIIJFFAK_00064 2.7e-95 S Hydrophobic domain protein
JIIJFFAK_00065 1.5e-49 yegS 2.7.1.107 I lipid kinase activity
JIIJFFAK_00068 5.1e-184 sip L Belongs to the 'phage' integrase family
JIIJFFAK_00069 5.9e-20 S MerR HTH family regulatory protein
JIIJFFAK_00070 2.1e-82 S Plasmid replication protein
JIIJFFAK_00071 2e-20
JIIJFFAK_00072 1.5e-160 D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
JIIJFFAK_00073 1.7e-35
JIIJFFAK_00074 3.2e-10 S Sigma-70, region 4
JIIJFFAK_00075 0.0 V Type II restriction enzyme, methylase subunits
JIIJFFAK_00076 2.4e-28
JIIJFFAK_00077 6.7e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
JIIJFFAK_00078 1e-24 rpmF J Belongs to the bacterial ribosomal protein bL32 family
JIIJFFAK_00079 1.4e-36 metE 2.1.1.14 E Methionine synthase
JIIJFFAK_00080 5.2e-55 metE 2.1.1.14 E Methionine synthase
JIIJFFAK_00081 1.4e-53 metE 2.1.1.14 E Methionine synthase
JIIJFFAK_00082 1.6e-241 hisS 6.1.1.21 J histidyl-tRNA synthetase
JIIJFFAK_00084 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
JIIJFFAK_00085 9.3e-167 XK27_01785 S cog cog1284
JIIJFFAK_00086 1.8e-147 yaaA S Belongs to the UPF0246 family
JIIJFFAK_00087 3.7e-116 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JIIJFFAK_00088 2.6e-91 XK27_10930 K acetyltransferase
JIIJFFAK_00089 7.5e-14
JIIJFFAK_00090 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
JIIJFFAK_00091 2.8e-299 ccs S the current gene model (or a revised gene model) may contain a frame shift
JIIJFFAK_00092 4.2e-44 yrzB S Belongs to the UPF0473 family
JIIJFFAK_00093 1.2e-70 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JIIJFFAK_00094 2.8e-44 yrzL S Belongs to the UPF0297 family
JIIJFFAK_00095 8.4e-27 rpmB J Belongs to the bacterial ribosomal protein bL28 family
JIIJFFAK_00096 5.2e-237 rarA L ATPase related to the helicase subunit of the Holliday junction resolvase
JIIJFFAK_00098 1.7e-215 int L Belongs to the 'phage' integrase family
JIIJFFAK_00099 1.9e-18 S Domain of unknown function (DUF3173)
JIIJFFAK_00100 5.9e-156 L Replication initiation factor
JIIJFFAK_00101 3.9e-287 V ABC transporter transmembrane region
JIIJFFAK_00102 3e-104 C Radical SAM
JIIJFFAK_00103 7.5e-109 C Radical SAM
JIIJFFAK_00105 1.4e-59 Z012_04635 K sequence-specific DNA binding
JIIJFFAK_00106 3.2e-56 Z012_04635 K sequence-specific DNA binding
JIIJFFAK_00107 2.4e-13 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
JIIJFFAK_00108 9.7e-30 S Domain of unknown function (DUF4649)
JIIJFFAK_00109 7.6e-130 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
JIIJFFAK_00110 1.8e-50 adk 2.7.4.3 F topology modulation protein
JIIJFFAK_00111 4.1e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
JIIJFFAK_00112 1.8e-80 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JIIJFFAK_00113 1.7e-35 XK27_09805 S MORN repeat protein
JIIJFFAK_00114 0.0 XK27_09800 I Acyltransferase
JIIJFFAK_00115 7.8e-188 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
JIIJFFAK_00116 1.3e-48 rpsJ J Involved in the binding of tRNA to the ribosomes
JIIJFFAK_00117 1.1e-110 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JIIJFFAK_00118 5.7e-104 rplD J Forms part of the polypeptide exit tunnel
JIIJFFAK_00119 2.4e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
JIIJFFAK_00120 8.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JIIJFFAK_00121 4.9e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
JIIJFFAK_00122 7.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
JIIJFFAK_00123 2.1e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
JIIJFFAK_00124 7.2e-71 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JIIJFFAK_00125 2.7e-26 rpmC J Belongs to the universal ribosomal protein uL29 family
JIIJFFAK_00126 6e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JIIJFFAK_00127 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
JIIJFFAK_00128 1.4e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
JIIJFFAK_00129 1.6e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
JIIJFFAK_00130 1.5e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JIIJFFAK_00131 1.2e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JIIJFFAK_00132 2.3e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
JIIJFFAK_00133 1.9e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
JIIJFFAK_00134 1.7e-79 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
JIIJFFAK_00135 2.5e-23 rpmD J ribosomal protein l30
JIIJFFAK_00136 4.4e-58 rplO J binds to the 23S rRNA
JIIJFFAK_00137 2.1e-230 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
JIIJFFAK_00138 9.2e-121 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
JIIJFFAK_00139 2.7e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
JIIJFFAK_00140 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
JIIJFFAK_00141 4e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
JIIJFFAK_00142 9.6e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JIIJFFAK_00143 4.8e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JIIJFFAK_00144 3.3e-62 rplQ J ribosomal protein l17
JIIJFFAK_00145 2.4e-92 pat 2.3.1.183 M acetyltransferase
JIIJFFAK_00146 6.1e-87 alkD L Dna alkylation repair
JIIJFFAK_00147 1.1e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JIIJFFAK_00148 6.6e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JIIJFFAK_00149 8.4e-125 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
JIIJFFAK_00150 0.0 smc D Required for chromosome condensation and partitioning
JIIJFFAK_00151 1.2e-196 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JIIJFFAK_00152 4.6e-91 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
JIIJFFAK_00153 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
JIIJFFAK_00156 2e-55 nrdD_1 1.1.98.6, 1.17.4.1 F Ribonucleoside-triphosphate reductase
JIIJFFAK_00157 5e-240 XK27_08130 K Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
JIIJFFAK_00159 2e-86 S ECF-type riboflavin transporter, S component
JIIJFFAK_00160 4.5e-44 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
JIIJFFAK_00161 8.7e-85 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
JIIJFFAK_00162 3.3e-82 XK27_01265 S ECF-type riboflavin transporter, S component
JIIJFFAK_00163 1.9e-294 yfmM S abc transporter atp-binding protein
JIIJFFAK_00164 3.4e-258 noxE P NADH oxidase
JIIJFFAK_00165 1.1e-181 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
JIIJFFAK_00166 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JIIJFFAK_00167 1.7e-134 srtA 3.4.22.70 M Sortase (surface protein transpeptidase)
JIIJFFAK_00168 1.4e-71 yaeR E COG0346 Lactoylglutathione lyase and related lyases
JIIJFFAK_00169 5.3e-165 ypuA S secreted protein
JIIJFFAK_00170 8.8e-60 L Transposase (IS116 IS110 IS902 family)
JIIJFFAK_00171 4.2e-71 L Transposase (IS116 IS110 IS902 family)
JIIJFFAK_00173 8.6e-184 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JIIJFFAK_00174 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JIIJFFAK_00175 2.2e-34 nrdH O Glutaredoxin
JIIJFFAK_00176 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
JIIJFFAK_00177 5.1e-212 citZ 2.3.3.1 C Belongs to the citrate synthase family
JIIJFFAK_00178 1.5e-222 icd 1.1.1.42 C Isocitrate dehydrogenase
JIIJFFAK_00179 7.9e-39 ptsH G phosphocarrier protein Hpr
JIIJFFAK_00180 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JIIJFFAK_00181 8.6e-265 gapN 1.2.1.9 C Belongs to the aldehyde dehydrogenase family
JIIJFFAK_00182 2.1e-28 6.3.2.2, 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
JIIJFFAK_00183 2.1e-178 yfmL 3.6.4.13 L DEAD DEAH box helicase
JIIJFFAK_00184 2.1e-114 udk 2.7.1.48 F Cytidine monophosphokinase
JIIJFFAK_00185 0.0 uup S abc transporter atp-binding protein
JIIJFFAK_00187 6.3e-13 MA20_06245 S yiaA/B two helix domain
JIIJFFAK_00188 2.2e-131 pip 1.11.1.10 S Alpha beta hydrolase
JIIJFFAK_00189 0.0 mprF 2.3.2.3 J Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JIIJFFAK_00190 8.7e-150 cobQ S glutamine amidotransferase
JIIJFFAK_00191 1.1e-253 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain protein
JIIJFFAK_00192 1.2e-123 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JIIJFFAK_00193 2.3e-168 ybbR S Protein conserved in bacteria
JIIJFFAK_00194 1.5e-250 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JIIJFFAK_00195 1.3e-70 gtrA S GtrA-like protein
JIIJFFAK_00196 7.9e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
JIIJFFAK_00197 8.1e-148 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JIIJFFAK_00198 5.7e-102 zupT P Mediates zinc uptake. May also transport other divalent cations
JIIJFFAK_00199 2.1e-207 yurR 1.4.5.1 E oxidoreductase
JIIJFFAK_00200 1.9e-161 rfbA 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
JIIJFFAK_00201 8.3e-113 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
JIIJFFAK_00202 1.9e-205 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
JIIJFFAK_00205 4.1e-217 hemN H Involved in the biosynthesis of porphyrin-containing compound
JIIJFFAK_00206 1.5e-143 fat 3.1.2.21 I Acyl-ACP thioesterase
JIIJFFAK_00207 5.9e-143 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
JIIJFFAK_00208 4e-121 ylfI S tigr01906
JIIJFFAK_00209 2e-140 hisK 3.1.3.15 E Histidinol phosphatase and related hydrolases of the PHP family
JIIJFFAK_00210 2.3e-09 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
JIIJFFAK_00211 5.6e-92 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
JIIJFFAK_00212 1.3e-22 XK27_08085
JIIJFFAK_00213 9.2e-56 L Integrase core domain protein
JIIJFFAK_00215 2.1e-196 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JIIJFFAK_00216 5.7e-183 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
JIIJFFAK_00217 2.3e-116 hisG 2.4.2.17 E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
JIIJFFAK_00218 1.1e-234 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
JIIJFFAK_00219 1.5e-106 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
JIIJFFAK_00220 1.2e-109 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
JIIJFFAK_00221 3.8e-128 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
JIIJFFAK_00222 8.3e-21 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
JIIJFFAK_00223 1e-108 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
JIIJFFAK_00224 1.2e-60 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
JIIJFFAK_00225 1.8e-50 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP
JIIJFFAK_00226 5.6e-240 rodA D Belongs to the SEDS family
JIIJFFAK_00227 7.8e-222 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JIIJFFAK_00228 1e-116 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
JIIJFFAK_00229 2e-174 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
JIIJFFAK_00230 6.7e-139 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
JIIJFFAK_00231 0.0 recJ L Single-strand DNA-specific exonuclease, C terminal domain
JIIJFFAK_00232 2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JIIJFFAK_00233 1.3e-181 metA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
JIIJFFAK_00234 2.9e-125 dnaD
JIIJFFAK_00235 3.4e-120 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JIIJFFAK_00238 1.2e-247 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
JIIJFFAK_00239 3.5e-29 xseB 3.1.11.6 L exodeoxyribonuclease VII activity
JIIJFFAK_00240 6.6e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
JIIJFFAK_00241 4.7e-157 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
JIIJFFAK_00242 3.7e-73 argR K Regulates arginine biosynthesis genes
JIIJFFAK_00243 5.8e-305 recN L May be involved in recombinational repair of damaged DNA
JIIJFFAK_00244 1e-148 DegV S DegV family
JIIJFFAK_00245 3.9e-143 ypmR E lipolytic protein G-D-S-L family
JIIJFFAK_00246 1.7e-83 ypmS S Protein conserved in bacteria
JIIJFFAK_00247 2.8e-39 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
JIIJFFAK_00249 1.1e-178 pyrD 1.3.1.14, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate
JIIJFFAK_00250 4.6e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JIIJFFAK_00251 3.4e-291 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JIIJFFAK_00252 7.3e-189 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
JIIJFFAK_00253 2.5e-43 ysdA L Membrane
JIIJFFAK_00254 6.8e-275 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
JIIJFFAK_00255 3.1e-112 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
JIIJFFAK_00256 1.4e-152 sua5 2.7.7.87 J Belongs to the SUA5 family
JIIJFFAK_00257 0.0 dnaE 2.7.7.7 L DNA polymerase
JIIJFFAK_00258 1.2e-188 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
JIIJFFAK_00259 1.3e-276 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
JIIJFFAK_00262 6.1e-28 Q the current gene model (or a revised gene model) may contain a frame shift
JIIJFFAK_00263 6.9e-30 Q the current gene model (or a revised gene model) may contain a frame shift
JIIJFFAK_00264 9.5e-178 XK27_08835 S ABC transporter substrate binding protein
JIIJFFAK_00265 2.2e-146 XK27_08840 S Belongs to the binding-protein-dependent transport system permease family
JIIJFFAK_00266 4.4e-135 XK27_08845 S abc transporter atp-binding protein
JIIJFFAK_00267 1e-309 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JIIJFFAK_00268 1.6e-151 estA CE1 S Putative esterase
JIIJFFAK_00269 4.7e-126 XK27_08875 O Zinc-dependent metalloprotease
JIIJFFAK_00270 2.5e-14 XK27_08880
JIIJFFAK_00271 5.1e-75 fld C Flavodoxin
JIIJFFAK_00272 9.2e-281 clcA P Chloride transporter, ClC family
JIIJFFAK_00273 9.6e-40 pheA 1.3.1.12, 2.3.1.79, 4.2.1.51, 5.4.99.5 E Chorismate mutase
JIIJFFAK_00274 2.6e-217 XK27_05110 P chloride
JIIJFFAK_00275 8.5e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
JIIJFFAK_00279 1.2e-19 WQ51_02665 S Protein of unknown function (DUF3042)
JIIJFFAK_00280 6.4e-165 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JIIJFFAK_00281 6.1e-88 ytsP 1.8.4.14 T GAF domain-containing protein
JIIJFFAK_00282 3.2e-295 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JIIJFFAK_00283 4.2e-175 birA 6.3.4.15 HK Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
JIIJFFAK_00284 2.1e-203 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
JIIJFFAK_00285 4.9e-20 G Domain of unknown function (DUF4832)
JIIJFFAK_00286 1.5e-194 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
JIIJFFAK_00288 9.4e-231 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JIIJFFAK_00289 1.2e-25 epuA S DNA-directed RNA polymerase subunit beta
JIIJFFAK_00290 2.4e-124 endA F DNA RNA non-specific endonuclease
JIIJFFAK_00291 4.2e-110 tcyB_2 P ABC transporter (permease)
JIIJFFAK_00292 8e-115 gltJ P ABC transporter (Permease
JIIJFFAK_00293 3.5e-149 peb1A ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
JIIJFFAK_00294 2.1e-140 glnQ 3.6.3.21 E abc transporter atp-binding protein
JIIJFFAK_00295 9.9e-129 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
JIIJFFAK_00296 1.5e-247 vicK 2.7.13.3 T Histidine kinase
JIIJFFAK_00297 2.1e-154 vicX 3.1.26.11 S Metal-dependent hydrolases of the beta-lactamase superfamily I
JIIJFFAK_00298 5.3e-231 murM 2.3.2.10, 2.3.2.16 V protein involved in methicillin resistance
JIIJFFAK_00299 4.6e-146 yidA S hydrolases of the HAD superfamily
JIIJFFAK_00300 8.3e-51 XK27_00115 2.3.1.128 K acetyltransferase
JIIJFFAK_00301 2.6e-67 ywiB S Domain of unknown function (DUF1934)
JIIJFFAK_00302 0.0 pacL 3.6.3.8 P cation transport ATPase
JIIJFFAK_00303 6.7e-136 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
JIIJFFAK_00304 9.2e-183 yjjH S Calcineurin-like phosphoesterase
JIIJFFAK_00305 2.7e-202 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
JIIJFFAK_00306 1.6e-182 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
JIIJFFAK_00307 2.5e-124 ftsE D cell division ATP-binding protein FtsE
JIIJFFAK_00308 4.7e-163 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
JIIJFFAK_00309 1.7e-92 mutX 3.6.1.55 F NTP pyrophosphohydrolases including oxidative damage repair enzymes
JIIJFFAK_00310 1.3e-178 yubA S permease
JIIJFFAK_00311 4.9e-224 G COG0457 FOG TPR repeat
JIIJFFAK_00312 4.2e-98 lepB 3.4.21.89 U Belongs to the peptidase S26 family
JIIJFFAK_00313 1.8e-234 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
JIIJFFAK_00314 2.9e-90 ebsA S Family of unknown function (DUF5322)
JIIJFFAK_00315 3.9e-15 M LysM domain
JIIJFFAK_00316 2.5e-121 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
JIIJFFAK_00317 3.5e-86 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
JIIJFFAK_00318 2.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
JIIJFFAK_00319 1.5e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JIIJFFAK_00320 1.6e-24 L Transposase
JIIJFFAK_00321 1.7e-47 XK27_03610 K Gnat family
JIIJFFAK_00322 6.4e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
JIIJFFAK_00323 2.4e-275 pepV 3.5.1.18 E Dipeptidase
JIIJFFAK_00324 1.5e-111 ung2 3.2.2.27 L Uracil-DNA glycosylase
JIIJFFAK_00326 1.7e-122 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
JIIJFFAK_00327 2.9e-237 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
JIIJFFAK_00328 9.6e-47 S Protein of unknown function (DUF1697)
JIIJFFAK_00329 1.2e-149 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
JIIJFFAK_00330 6.1e-36 clcA_2 P chloride channel
JIIJFFAK_00331 2.4e-66 yfeJ 6.3.5.2 F glutamine amidotransferase
JIIJFFAK_00332 4.1e-38 yfeJ 6.3.5.2 F glutamine amidotransferase
JIIJFFAK_00333 1.2e-129 deoD 2.4.2.1, 2.4.2.28 F purine nucleoside phosphorylase
JIIJFFAK_00334 4.2e-251 cps4A K Cell envelope-like function transcriptional attenuator common domain protein
JIIJFFAK_00335 3e-136 cpsB 3.1.3.48 GM Capsular polysaccharide biosynthesis protein
JIIJFFAK_00336 1.1e-103 cps4C M biosynthesis protein
JIIJFFAK_00337 1.4e-112 cpsD D COG0489 ATPases involved in chromosome partitioning
JIIJFFAK_00338 1.7e-249 cpsE M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
JIIJFFAK_00339 9.7e-23 rgpAc GT4 M group 1 family protein
JIIJFFAK_00340 2.2e-22 L Transposase
JIIJFFAK_00341 8.8e-139 L Integrase core domain
JIIJFFAK_00342 6.9e-96 2.7.8.12 GT2 S Glycosyltransferase like family 2
JIIJFFAK_00343 1.3e-199 L Transposase
JIIJFFAK_00344 1.3e-23 L Transposase
JIIJFFAK_00345 1.1e-235 cps1C S Polysaccharide biosynthesis protein
JIIJFFAK_00346 3.2e-71 L COG2801 Transposase and inactivated derivatives
JIIJFFAK_00347 1.1e-60 L Integrase core domain
JIIJFFAK_00348 3.3e-37 L transposase activity
JIIJFFAK_00349 1.2e-70 rfbP 2.7.8.6 M Bacterial sugar transferase
JIIJFFAK_00350 1.4e-72 cpsF M Oligosaccharide biosynthesis protein Alg14 like
JIIJFFAK_00351 1.9e-41 pssE S Glycosyltransferase family 28 C-terminal domain
JIIJFFAK_00352 6.5e-72 M Glycosyltransferase sugar-binding region containing DXD motif
JIIJFFAK_00353 7.8e-16
JIIJFFAK_00354 6.4e-33 cpsJ S Glycosyltransferase like family 2
JIIJFFAK_00355 6.2e-112 L the current gene model (or a revised gene model) may contain a frame shift
JIIJFFAK_00356 3.1e-37 L Transposase
JIIJFFAK_00357 2.2e-94 V VanZ like family
JIIJFFAK_00358 5.4e-15 supH 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
JIIJFFAK_00359 5.6e-65 supH 3.1.3.102, 3.1.3.104 Q phosphatase activity
JIIJFFAK_00360 1.1e-95 pgm G Belongs to the phosphoglycerate mutase family
JIIJFFAK_00361 7.2e-104 G Belongs to the phosphoglycerate mutase family
JIIJFFAK_00362 2.5e-99 G Belongs to the phosphoglycerate mutase family
JIIJFFAK_00363 1.1e-198 S hmm pf01594
JIIJFFAK_00364 2e-18 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
JIIJFFAK_00365 2.4e-98 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
JIIJFFAK_00366 3.2e-36 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
JIIJFFAK_00367 4.9e-39 S granule-associated protein
JIIJFFAK_00368 8.5e-290 S unusual protein kinase
JIIJFFAK_00369 5.5e-34 estA E Lysophospholipase L1 and related esterases
JIIJFFAK_00370 1.9e-59 estA E GDSL-like protein
JIIJFFAK_00371 1.1e-158 rssA S Phospholipase, patatin family
JIIJFFAK_00372 4.3e-83 3.4.16.4 M Belongs to the peptidase S11 family
JIIJFFAK_00373 2.3e-26 3.4.16.4 M Belongs to the peptidase S11 family
JIIJFFAK_00374 3.9e-24 3.4.16.4 M Belongs to the peptidase S11 family
JIIJFFAK_00375 2.9e-21 dacA1 3.4.16.4 M Belongs to the peptidase S11 family
JIIJFFAK_00376 5.4e-19 dacA1 3.4.16.4 M Belongs to the peptidase S11 family
JIIJFFAK_00377 4e-215 yeaB K Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JIIJFFAK_00378 7.2e-126 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
JIIJFFAK_00379 1.1e-234 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
JIIJFFAK_00380 5.7e-66 S the current gene model (or a revised gene model) may contain a frame shift
JIIJFFAK_00381 5e-38 P membrane protein (DUF2207)
JIIJFFAK_00382 6e-185 acoA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
JIIJFFAK_00383 3.7e-182 acoB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
JIIJFFAK_00384 1.8e-198 acoC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
JIIJFFAK_00385 0.0 lpdA 1.8.1.4 C Dehydrogenase
JIIJFFAK_00386 2.6e-20 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
JIIJFFAK_00387 3.6e-82 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
JIIJFFAK_00388 8.5e-266 3.5.1.28 NU amidase activity
JIIJFFAK_00389 1.9e-37 3.5.1.28 NU amidase activity
JIIJFFAK_00390 6.8e-210 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
JIIJFFAK_00391 3.8e-54 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
JIIJFFAK_00392 2e-139 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
JIIJFFAK_00393 4e-165 yclN P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JIIJFFAK_00394 1.9e-167 fatC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JIIJFFAK_00395 6.8e-136 yclP 3.6.3.34 P abc transporter atp-binding protein
JIIJFFAK_00396 2.2e-177 fatB P ABC-type enterochelin transport system, periplasmic component
JIIJFFAK_00397 4.6e-152 ycdO P periplasmic lipoprotein involved in iron transport
JIIJFFAK_00398 1.5e-233 ycdB P peroxidase
JIIJFFAK_00399 3.9e-301 ywbL P COG0672 High-affinity Fe2 Pb2 permease
JIIJFFAK_00400 5.8e-121 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JIIJFFAK_00401 4.6e-25 tatA U protein secretion
JIIJFFAK_00402 2.3e-23 L Transposase
JIIJFFAK_00403 3.4e-304 malQ 2.4.1.25 GH77 G 4-alpha-glucanotransferase
JIIJFFAK_00404 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
JIIJFFAK_00405 3.7e-09
JIIJFFAK_00407 1.3e-187 lplA 6.3.1.20 H Lipoate-protein ligase
JIIJFFAK_00408 1.6e-194 xerS D Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division
JIIJFFAK_00409 0.0 pepN 3.4.11.2 E aminopeptidase
JIIJFFAK_00410 2.4e-113 phoU P Plays a role in the regulation of phosphate uptake
JIIJFFAK_00411 1.7e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
JIIJFFAK_00412 1e-150 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
JIIJFFAK_00413 5.9e-155 pstA P phosphate transport system permease
JIIJFFAK_00414 7.2e-156 pstC P probably responsible for the translocation of the substrate across the membrane
JIIJFFAK_00415 1.3e-157 pstS P phosphate
JIIJFFAK_00416 3e-256 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
JIIJFFAK_00417 6.5e-142 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
JIIJFFAK_00418 2.3e-44 yktA S Belongs to the UPF0223 family
JIIJFFAK_00419 1.4e-71 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
JIIJFFAK_00420 2.6e-174 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
JIIJFFAK_00421 2.4e-150 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JIIJFFAK_00422 5.2e-22 XK27_04775 P Hemerythrin HHE cation binding domain protein
JIIJFFAK_00423 1.7e-145 XK27_04775 S hemerythrin HHE cation binding domain
JIIJFFAK_00424 1.1e-110 hsdS2 2.1.1.72 V Type I restriction modification DNA specificity domain
JIIJFFAK_00425 3.5e-88 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
JIIJFFAK_00426 1.3e-131 S haloacid dehalogenase-like hydrolase
JIIJFFAK_00427 5.9e-241 metY 2.5.1.49 E o-acetylhomoserine
JIIJFFAK_00428 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
JIIJFFAK_00429 1.2e-239 agcS E (Alanine) symporter
JIIJFFAK_00430 1.3e-246 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
JIIJFFAK_00431 4e-22 bglC K Transcriptional regulator
JIIJFFAK_00432 7.6e-64 yfiF3 K sequence-specific DNA binding
JIIJFFAK_00433 3.7e-60 sasH 3.1.3.5, 3.6.1.45 F Belongs to the 5'-nucleotidase family
JIIJFFAK_00434 2.1e-110 sasH 3.1.3.5, 3.6.1.45 F Belongs to the 5'-nucleotidase family
JIIJFFAK_00436 1.8e-67 yecS P ABC transporter (Permease
JIIJFFAK_00437 8.8e-134 yckB ET Belongs to the bacterial solute-binding protein 3 family
JIIJFFAK_00438 1e-103 nylA 3.5.1.4 J Belongs to the amidase family
JIIJFFAK_00439 5.5e-267 dtpT E transporter
JIIJFFAK_00441 1.2e-63 nylA 3.5.1.4 J Belongs to the amidase family
JIIJFFAK_00442 7.5e-112 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JIIJFFAK_00443 7e-127 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
JIIJFFAK_00444 1.2e-73 csm6 S Psort location Cytoplasmic, score
JIIJFFAK_00445 2.1e-14 csm6 S Psort location Cytoplasmic, score
JIIJFFAK_00446 4.4e-205 csm5 L CRISPR-associated RAMP protein, Csm5 family
JIIJFFAK_00447 9.2e-164 csm4 L CRISPR-associated RAMP protein, Csm4 family
JIIJFFAK_00448 4.2e-113 csm3 L RAMP superfamily
JIIJFFAK_00449 2.2e-37 csm2 L Csm2 Type III-A
JIIJFFAK_00450 0.0 csm1 S CRISPR-associated protein Csm1 family
JIIJFFAK_00451 1.2e-132 cas6 S CRISPR-associated endoribonuclease Cas6
JIIJFFAK_00452 3.7e-54 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JIIJFFAK_00453 8.9e-184 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JIIJFFAK_00454 1.6e-174 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
JIIJFFAK_00455 2.2e-148 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
JIIJFFAK_00456 5e-96 thiJ 2.7.11.1, 3.5.1.124 S DJ-1 family
JIIJFFAK_00457 2e-113 S TraX protein
JIIJFFAK_00459 6.6e-309 FbpA K RNA-binding protein homologous to eukaryotic snRNP
JIIJFFAK_00460 1.1e-265 S Psort location CytoplasmicMembrane, score
JIIJFFAK_00461 5.1e-26 dinF V drug transmembrane transporter activity
JIIJFFAK_00462 9.6e-72 dinF V Mate efflux family protein
JIIJFFAK_00463 3.6e-18 yclQ P ABC-type enterochelin transport system, periplasmic component
JIIJFFAK_00464 1.8e-24 yclQ P ABC-type enterochelin transport system, periplasmic component
JIIJFFAK_00465 4.1e-118 gph 3.1.3.18 S HAD hydrolase, family IA, variant 1
JIIJFFAK_00466 2.6e-143 2.4.2.3 F Phosphorylase superfamily
JIIJFFAK_00469 3.8e-78 S Alpha/beta hydrolase of unknown function (DUF915)
JIIJFFAK_00470 1.8e-16 S Alpha/beta hydrolase of unknown function (DUF915)
JIIJFFAK_00471 6e-08 S Hydrolases of the alpha beta superfamily
JIIJFFAK_00472 6.2e-196 adhB 1.1.1.1, 1.1.1.14 E Dehydrogenase
JIIJFFAK_00473 2.7e-210 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
JIIJFFAK_00474 1.2e-158 czcD P cation diffusion facilitator family transporter
JIIJFFAK_00475 1.2e-103 K Transcriptional regulator, TetR family
JIIJFFAK_00477 6.1e-13 L Transposase
JIIJFFAK_00478 1e-193 L Transposase
JIIJFFAK_00479 3e-133 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
JIIJFFAK_00480 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
JIIJFFAK_00481 6.6e-61 EGP Major facilitator Superfamily
JIIJFFAK_00482 3.9e-136 speB 3.5.3.11 E hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
JIIJFFAK_00483 1.3e-212 pqqE C radical SAM domain protein
JIIJFFAK_00486 5.2e-156 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
JIIJFFAK_00487 4.1e-53 K peptidyl-tyrosine sulfation
JIIJFFAK_00491 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
JIIJFFAK_00492 3.9e-19 IQ Acetoin reductase
JIIJFFAK_00493 6.8e-51 IQ Acetoin reductase
JIIJFFAK_00494 2.7e-48 pspE P Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JIIJFFAK_00495 1.7e-75 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
JIIJFFAK_00496 1.9e-152 XK27_05470 E Methionine synthase
JIIJFFAK_00497 6.6e-259 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
JIIJFFAK_00498 6.9e-251 T PhoQ Sensor
JIIJFFAK_00499 2.2e-122 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
JIIJFFAK_00500 5.1e-153 S TraX protein
JIIJFFAK_00501 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JIIJFFAK_00502 2.4e-158 dprA LU DNA protecting protein DprA
JIIJFFAK_00503 1.1e-167 GK ROK family
JIIJFFAK_00504 1.5e-135 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JIIJFFAK_00505 1.4e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JIIJFFAK_00506 6.9e-127 K DNA-binding helix-turn-helix protein
JIIJFFAK_00507 8.6e-90 niaR S small molecule binding protein (contains 3H domain)
JIIJFFAK_00508 2.4e-87 niaX
JIIJFFAK_00509 1.3e-269 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JIIJFFAK_00510 1.1e-53 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
JIIJFFAK_00511 1.6e-126 gntR1 K transcriptional
JIIJFFAK_00512 3.9e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
JIIJFFAK_00513 8.5e-88 sthIM 2.1.1.72 L Adenine specific DNA methylase Mod
JIIJFFAK_00514 0.0 res_1 3.1.21.5 S Type III restriction
JIIJFFAK_00515 3e-21
JIIJFFAK_00517 3.2e-78 adhP 1.1.1.1 C alcohol dehydrogenase
JIIJFFAK_00518 2.8e-13 adhP 1.1.1.1 C alcohol dehydrogenase
JIIJFFAK_00519 2.3e-62 adhP 1.1.1.1 C alcohol dehydrogenase
JIIJFFAK_00520 3.1e-142 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JIIJFFAK_00521 1.4e-158 aatB ET ABC transporter substrate-binding protein
JIIJFFAK_00522 3.4e-112 glnQ 3.6.3.21 E abc transporter atp-binding protein
JIIJFFAK_00523 5.3e-105 artQ P ABC transporter (Permease
JIIJFFAK_00524 2.5e-58 phnA P Alkylphosphonate utilization operon protein PhnA
JIIJFFAK_00525 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
JIIJFFAK_00526 4.5e-166 cpsY K Transcriptional regulator
JIIJFFAK_00527 6.6e-71 L transposition
JIIJFFAK_00528 1.9e-119 mur1 NU muramidase
JIIJFFAK_00529 1.5e-170 yeiH S Membrane
JIIJFFAK_00530 3.4e-09
JIIJFFAK_00531 2.1e-293 adcA P Belongs to the bacterial solute-binding protein 9 family
JIIJFFAK_00532 3.7e-88 XK27_10720 D peptidase activity
JIIJFFAK_00533 3.4e-79 hsdM 2.1.1.72 V HsdM N-terminal domain
JIIJFFAK_00534 1.1e-08 mycA 4.2.1.53 S Myosin-crossreactive antigen
JIIJFFAK_00535 2.9e-154 glcU U Glucose uptake
JIIJFFAK_00536 5.2e-113 hsdM 2.1.1.72 V type I restriction-modification system
JIIJFFAK_00537 5.2e-56 hsdS 2.1.1.72, 3.1.21.3 V type I restriction modification DNA specificity domain
JIIJFFAK_00538 3.5e-146 L Transposase
JIIJFFAK_00539 4.8e-54 L Transposase
JIIJFFAK_00540 3.3e-98 cysE 2.3.1.30 E serine acetyltransferase
JIIJFFAK_00541 3.5e-219 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
JIIJFFAK_00542 2.3e-170 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
JIIJFFAK_00543 4.4e-194 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
JIIJFFAK_00544 0.0 copB 3.6.3.4 P P-type ATPase
JIIJFFAK_00545 5.4e-32 cspD K Cold shock protein domain
JIIJFFAK_00546 5.8e-41 pepD E dipeptidase activity
JIIJFFAK_00547 8e-90 pepD E Dipeptidase
JIIJFFAK_00548 8.7e-162 whiA K May be required for sporulation
JIIJFFAK_00549 2.8e-182 ybhK S Required for morphogenesis under gluconeogenic growth conditions
JIIJFFAK_00550 1.2e-163 rapZ S Displays ATPase and GTPase activities
JIIJFFAK_00551 5.3e-136 yejC S cyclic nucleotide-binding protein
JIIJFFAK_00552 4.2e-18 D nuclear chromosome segregation
JIIJFFAK_00553 2.5e-94 queF 1.7.1.13 S Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily
JIIJFFAK_00554 3.9e-133 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
JIIJFFAK_00555 2.2e-81 queD 4.1.2.50, 4.2.3.12 H synthase
JIIJFFAK_00556 2e-123 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
JIIJFFAK_00557 3e-63 tdcF 3.5.99.10 J endoribonuclease L-PSP
JIIJFFAK_00558 3e-13
JIIJFFAK_00559 1.5e-07
JIIJFFAK_00560 1.7e-262 asnS 6.1.1.22 J Catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
JIIJFFAK_00561 6.5e-218 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
JIIJFFAK_00562 3.1e-81 ypmB S Protein conserved in bacteria
JIIJFFAK_00563 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
JIIJFFAK_00564 4e-121 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
JIIJFFAK_00565 4.8e-171 yufQ S Belongs to the binding-protein-dependent transport system permease family
JIIJFFAK_00566 4.7e-191 yufP S Belongs to the binding-protein-dependent transport system permease family
JIIJFFAK_00567 2.7e-280 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
JIIJFFAK_00568 1.5e-189 tcsA S ABC-type transport system, periplasmic component surface lipoprotein
JIIJFFAK_00569 2.2e-47 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
JIIJFFAK_00570 1.5e-62 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
JIIJFFAK_00571 5.5e-29 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
JIIJFFAK_00572 1.7e-100 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
JIIJFFAK_00573 1.3e-24 pdp 2.4.2.2, 2.4.2.4 F phosphorylase activity
JIIJFFAK_00574 1.8e-107 rsmC 2.1.1.172 J Methyltransferase small domain protein
JIIJFFAK_00575 2.5e-172 coaA 2.7.1.33 F Pantothenic acid kinase
JIIJFFAK_00576 2.1e-30 rpsT J rRNA binding
JIIJFFAK_00577 9.2e-110 T PhoQ Sensor
JIIJFFAK_00578 4.3e-41 T PhoQ Sensor
JIIJFFAK_00579 6.4e-66 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
JIIJFFAK_00580 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
JIIJFFAK_00581 6.2e-120 coaB 4.1.1.36, 6.3.2.5 H Phosphopantothenate-cysteine ligase
JIIJFFAK_00582 4.8e-94 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JIIJFFAK_00583 1.6e-92 panT S ECF transporter, substrate-specific component
JIIJFFAK_00584 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
JIIJFFAK_00585 7.3e-166 metF 1.5.1.20 C reductase
JIIJFFAK_00586 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JIIJFFAK_00588 7.1e-217 sip L Belongs to the 'phage' integrase family
JIIJFFAK_00589 6e-39 K Helix-turn-helix
JIIJFFAK_00590 5.5e-17 K TRANSCRIPTIONal
JIIJFFAK_00595 6.9e-22
JIIJFFAK_00596 3e-164 KL Phage plasmid primase P4 family
JIIJFFAK_00597 2e-296 S DNA primase
JIIJFFAK_00599 2.3e-12
JIIJFFAK_00601 2e-103
JIIJFFAK_00602 1.4e-66 S tRNA_anti-like
JIIJFFAK_00603 4e-22 L Belongs to the 'phage' integrase family
JIIJFFAK_00604 3e-44 ymbI L transposase activity
JIIJFFAK_00605 2.6e-72 hpaIIR 3.1.21.4 L HpaII restriction endonuclease
JIIJFFAK_00606 1.7e-146 2.1.1.37 H cytosine-specific methyltransferase
JIIJFFAK_00607 5.1e-106 V Abi-like protein
JIIJFFAK_00608 0.0 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH component I
JIIJFFAK_00609 0.0 3.6.3.8 P cation transport ATPase
JIIJFFAK_00610 5.2e-229 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
JIIJFFAK_00611 1.7e-35 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JIIJFFAK_00612 4.6e-238 dltB M Membrane protein involved in D-alanine export
JIIJFFAK_00613 1.4e-297 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JIIJFFAK_00614 1.7e-09 S D-Ala-teichoic acid biosynthesis protein
JIIJFFAK_00615 0.0 XK27_10035 V abc transporter atp-binding protein
JIIJFFAK_00616 0.0 yfiB1 V abc transporter atp-binding protein
JIIJFFAK_00617 2.4e-107 pvaA M lytic transglycosylase activity
JIIJFFAK_00618 6e-177 ndpA S 37-kD nucleoid-associated bacterial protein
JIIJFFAK_00619 1.8e-234 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JIIJFFAK_00620 9.7e-109 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
JIIJFFAK_00621 1.2e-154 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
JIIJFFAK_00622 3e-193 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JIIJFFAK_00623 4.5e-111 tdk 2.7.1.21 F thymidine kinase
JIIJFFAK_00624 4.6e-188 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
JIIJFFAK_00625 8.9e-155 gst O Glutathione S-transferase
JIIJFFAK_00626 1e-184 nrnA 3.1.13.3, 3.1.3.7 S domain protein
JIIJFFAK_00627 1.9e-175 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
JIIJFFAK_00628 2e-45 rpmE2 J 50S ribosomal protein L31
JIIJFFAK_00629 8.8e-229 mntH P Mn2 and Fe2 transporters of the NRAMP family
JIIJFFAK_00631 3.2e-45 L Transposase
JIIJFFAK_00632 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JIIJFFAK_00633 3.3e-134 divIVA D Cell division protein DivIVA
JIIJFFAK_00634 4.7e-143 ylmH T S4 RNA-binding domain
JIIJFFAK_00635 8.8e-35 yggT D integral membrane protein
JIIJFFAK_00636 2e-95 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
JIIJFFAK_00637 2.7e-123 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JIIJFFAK_00638 5.4e-237 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JIIJFFAK_00639 1.1e-251 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
JIIJFFAK_00640 6.9e-177 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
JIIJFFAK_00641 1e-201 murG 2.4.1.227 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JIIJFFAK_00642 1.6e-252 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JIIJFFAK_00644 0.0 typA T GTP-binding protein TypA
JIIJFFAK_00645 1.6e-177 glk 2.7.1.2 G Glucokinase
JIIJFFAK_00646 8.4e-28 yqgQ S protein conserved in bacteria
JIIJFFAK_00647 1.1e-80 perR P Belongs to the Fur family
JIIJFFAK_00648 1.6e-91 dps P Belongs to the Dps family
JIIJFFAK_00649 1.5e-115 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
JIIJFFAK_00650 1.4e-190 3.5.2.6 V D-alanyl-D-alanine carboxypeptidase
JIIJFFAK_00651 2.5e-112 sodA 1.15.1.1 C radicals which are normally produced within the cells and which are toxic to biological systems
JIIJFFAK_00652 2.4e-184 holA 2.7.7.7 L DNA polymerase III delta subunit
JIIJFFAK_00653 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
JIIJFFAK_00654 6.2e-56 S Domain of unknown function (DUF4430)
JIIJFFAK_00655 5.1e-73 S Psort location CytoplasmicMembrane, score
JIIJFFAK_00656 1.8e-135 htpX O Belongs to the peptidase M48B family
JIIJFFAK_00657 1.5e-92 lemA S LemA family
JIIJFFAK_00658 8.8e-157 spd F DNA RNA non-specific endonuclease
JIIJFFAK_00659 3e-38
JIIJFFAK_00660 2.5e-44
JIIJFFAK_00662 9.3e-68 hsdS 3.1.21.3 L Type I restriction modification DNA specificity domain
JIIJFFAK_00663 7.3e-289 hsdM 2.1.1.72 V N-6 DNA Methylase
JIIJFFAK_00664 0.0 hsdR 3.1.21.3 V Type I restriction enzyme R protein N terminus (HSDR_N)
JIIJFFAK_00665 1.4e-44 sdh 1.1.1.276, 1.1.1.313, 1.1.1.381 S Belongs to the short-chain dehydrogenases reductases (SDR) family
JIIJFFAK_00666 8.3e-76 sdh 1.1.1.276, 1.1.1.313, 1.1.1.381 S Belongs to the short-chain dehydrogenases reductases (SDR) family
JIIJFFAK_00667 8e-18 MA20_36090 S Protein of unknown function (DUF2974)
JIIJFFAK_00668 1.7e-10 MA20_36090 S Protein of unknown function (DUF2974)
JIIJFFAK_00669 1.4e-113 1.14.14.5 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JIIJFFAK_00670 2.1e-27 P Hemerythrin HHE cation binding domain protein
JIIJFFAK_00671 2.2e-144 XK27_00880 3.5.1.28 M Glycosyl hydrolase, family 25
JIIJFFAK_00672 7.9e-82 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JIIJFFAK_00673 5.1e-116 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase
JIIJFFAK_00674 9.8e-174 S hydrolase
JIIJFFAK_00675 5.9e-16
JIIJFFAK_00676 1.5e-154 M LysM domain
JIIJFFAK_00677 1.9e-286 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
JIIJFFAK_00678 1.2e-33 S SIR2-like domain
JIIJFFAK_00679 5.2e-29 S SIR2-like domain
JIIJFFAK_00680 4.1e-225 mutH L DNA mismatch repair enzyme MutH
JIIJFFAK_00681 6e-209 dcm 2.1.1.37 H C-5 cytosine-specific DNA methylase
JIIJFFAK_00682 8.1e-11
JIIJFFAK_00683 1.1e-234 mntH P H( )-stimulated, divalent metal cation uptake system
JIIJFFAK_00684 1.1e-33 XK27_12190 S protein conserved in bacteria
JIIJFFAK_00686 8.4e-88 bioY S biotin synthase
JIIJFFAK_00687 8.1e-46 S CHY zinc finger
JIIJFFAK_00688 3.4e-252 yegQ O Peptidase U32
JIIJFFAK_00689 2e-177 yegQ O Peptidase U32
JIIJFFAK_00691 5.5e-69 ytxH S General stress protein
JIIJFFAK_00693 4e-147 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JIIJFFAK_00694 1e-170 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
JIIJFFAK_00695 9.9e-42 pspC KT PspC domain
JIIJFFAK_00696 0.0 yhgF K Transcriptional accessory protein
JIIJFFAK_00698 1.2e-155 XK27_03015 S permease
JIIJFFAK_00699 2.3e-145 ycgQ S TIGR03943 family
JIIJFFAK_00700 9e-195 S CRISPR-associated protein Csn2 subfamily St
JIIJFFAK_00701 1.8e-53 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JIIJFFAK_00702 4.2e-172 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JIIJFFAK_00703 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
JIIJFFAK_00704 1.1e-94
JIIJFFAK_00705 7.3e-28 estA E GDSL-like Lipase/Acylhydrolase
JIIJFFAK_00706 3e-45 dam 2.1.1.72 L D12 class N6 adenine-specific DNA methyltransferase
JIIJFFAK_00707 1.5e-18 K Cro/C1-type HTH DNA-binding domain
JIIJFFAK_00708 3.2e-46
JIIJFFAK_00709 8.9e-20
JIIJFFAK_00710 1.7e-257 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JIIJFFAK_00711 4.5e-97 mip S hydroperoxide reductase activity
JIIJFFAK_00712 9.1e-203 I acyl-CoA dehydrogenase
JIIJFFAK_00713 2.2e-149 ydiA P C4-dicarboxylate transporter malic acid transport protein
JIIJFFAK_00714 6.4e-252 msrR K Transcriptional regulator
JIIJFFAK_00715 6.7e-153 pheA 4.2.1.51 E Prephenate dehydratase
JIIJFFAK_00716 1.7e-87 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JIIJFFAK_00717 2.6e-236 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
JIIJFFAK_00718 3e-173 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
JIIJFFAK_00719 3.2e-53 yheA S Belongs to the UPF0342 family
JIIJFFAK_00720 2.2e-207 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
JIIJFFAK_00721 4.5e-219 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
JIIJFFAK_00722 3.5e-202 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
JIIJFFAK_00723 1.7e-162 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JIIJFFAK_00724 8.6e-122 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
JIIJFFAK_00725 2e-219 ywbD 2.1.1.191 J Methyltransferase
JIIJFFAK_00726 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
JIIJFFAK_00727 2e-25 WQ51_00785
JIIJFFAK_00728 9.6e-247 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
JIIJFFAK_00729 1e-78 yueI S Protein of unknown function (DUF1694)
JIIJFFAK_00730 1.3e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
JIIJFFAK_00731 6.6e-101 yyaQ V Protein conserved in bacteria
JIIJFFAK_00732 2.8e-28 yyaQ S YjbR
JIIJFFAK_00733 4.4e-183 ccpA K Catabolite control protein A
JIIJFFAK_00734 4.2e-211 pepQ 3.4.13.9 E Belongs to the peptidase M24B family
JIIJFFAK_00735 1.7e-63 yugI 5.3.1.9 J RNA binding protein, contains ribosomal protein S1 domain
JIIJFFAK_00736 2.8e-276 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JIIJFFAK_00737 1.1e-80 smpB O the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
JIIJFFAK_00738 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
JIIJFFAK_00739 2e-33 secG U Preprotein translocase subunit SecG
JIIJFFAK_00740 2.1e-219 mdtG EGP Major facilitator Superfamily
JIIJFFAK_00741 1.3e-105 coaE 2.7.1.24, 3.2.2.23, 4.2.99.18 GH23 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
JIIJFFAK_00742 1.9e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
JIIJFFAK_00743 1.3e-165 era M An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JIIJFFAK_00744 1.1e-63 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
JIIJFFAK_00745 5.9e-88 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JIIJFFAK_00746 6.8e-53 licT K transcriptional antiterminator
JIIJFFAK_00747 1.7e-54 licT K transcriptional antiterminator
JIIJFFAK_00748 4.9e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JIIJFFAK_00749 0.0 pbp2b 3.4.16.4 M penicillin-binding protein
JIIJFFAK_00750 7.8e-149 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JIIJFFAK_00751 3.9e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
JIIJFFAK_00752 7.5e-23 I Alpha/beta hydrolase family
JIIJFFAK_00753 1.5e-35 yugF I carboxylic ester hydrolase activity
JIIJFFAK_00754 2.2e-45 K sequence-specific DNA binding
JIIJFFAK_00755 2.4e-104 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
JIIJFFAK_00757 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
JIIJFFAK_00758 3.1e-78 feoA P FeoA domain protein
JIIJFFAK_00759 2.2e-131 glnQ 3.6.3.21 E abc transporter atp-binding protein
JIIJFFAK_00760 7.5e-118 WQ51_01820 P Binding-protein-dependent transport system inner membrane component
JIIJFFAK_00761 1.3e-34 ykuJ S protein conserved in bacteria
JIIJFFAK_00762 1.2e-180 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
JIIJFFAK_00763 0.0 clpE O Belongs to the ClpA ClpB family
JIIJFFAK_00764 1.8e-86 mutT 3.5.4.33, 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
JIIJFFAK_00765 3.7e-48 XK27_09445 S Domain of unknown function (DUF1827)
JIIJFFAK_00766 1.2e-65 S oxidoreductase
JIIJFFAK_00767 3.4e-233 murN 2.3.2.10, 2.3.2.16 V FemAB family
JIIJFFAK_00768 3.7e-70 M Pfam SNARE associated Golgi protein
JIIJFFAK_00769 1.3e-29 S Domain of Unknown Function with PDB structure (DUF3862)
JIIJFFAK_00770 1.1e-44 S Domain of Unknown Function with PDB structure (DUF3862)
JIIJFFAK_00773 8.4e-205 rpsA 1.17.7.4 J ribosomal protein S1
JIIJFFAK_00776 4.8e-16 S Protein of unknown function (DUF2969)
JIIJFFAK_00777 2.4e-200 ilvE 2.6.1.42 E Aminotransferase
JIIJFFAK_00778 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
JIIJFFAK_00779 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
JIIJFFAK_00780 7.1e-102 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
JIIJFFAK_00781 4.9e-15 L Helix-hairpin-helix DNA-binding motif class 1
JIIJFFAK_00782 1.4e-29 S Domain of unknown function (DUF1912)
JIIJFFAK_00783 1.2e-177 mmuM 1.5.1.20, 2.1.1.10 H Homocysteine
JIIJFFAK_00784 1.5e-250 mmuP E amino acid
JIIJFFAK_00785 3e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
JIIJFFAK_00786 2e-225 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
JIIJFFAK_00787 9.7e-22
JIIJFFAK_00788 3.4e-91 folA 1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JIIJFFAK_00789 2.2e-167 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
JIIJFFAK_00790 1.7e-218 mvaS 2.3.3.10 I synthase
JIIJFFAK_00791 2.7e-233 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
JIIJFFAK_00792 1e-25 K hmm pf08876
JIIJFFAK_00793 1.1e-116 yqfA K protein, Hemolysin III
JIIJFFAK_00794 1.6e-22 S Protein of unknown function (DUF3114)
JIIJFFAK_00795 1.1e-161 S Protein of unknown function (DUF3114)
JIIJFFAK_00796 1.6e-70 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
JIIJFFAK_00797 2.3e-57 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
JIIJFFAK_00798 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JIIJFFAK_00799 5.5e-49 XK27_13030
JIIJFFAK_00800 1.2e-247 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
JIIJFFAK_00801 4.4e-191 dgs 2.4.1.208 GT4 M Glycosyltransferase, group 1 family protein
JIIJFFAK_00802 4.2e-68 U protein secretion
JIIJFFAK_00803 3e-29 U protein secretion
JIIJFFAK_00805 1.7e-117 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JIIJFFAK_00806 2.5e-21
JIIJFFAK_00807 1e-96 nudF 3.6.1.13 L AdP-ribose pyrophosphatase
JIIJFFAK_00808 1.8e-251 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JIIJFFAK_00809 2.4e-184 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
JIIJFFAK_00810 1e-176 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I GHMP kinases N terminal domain
JIIJFFAK_00811 1.4e-170 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
JIIJFFAK_00812 7.9e-136 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
JIIJFFAK_00813 8.8e-104 GBS0088 J protein conserved in bacteria
JIIJFFAK_00814 7.5e-247 merA 1.16.1.1 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JIIJFFAK_00815 1.3e-46 ald 1.4.1.1 C Belongs to the AlaDH PNT family
JIIJFFAK_00816 3.4e-17 ald 1.4.1.1 E alanine dehydrogenase activity
JIIJFFAK_00817 7e-217 hipO 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
JIIJFFAK_00818 4.8e-131 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
JIIJFFAK_00819 2.5e-113 S VIT family
JIIJFFAK_00820 6.5e-142 deoD_1 2.4.2.3 F Phosphorylase superfamily
JIIJFFAK_00821 1.9e-22
JIIJFFAK_00822 8e-28 XK27_00085 K Transcriptional
JIIJFFAK_00823 6.9e-197 yceA S Belongs to the UPF0176 family
JIIJFFAK_00824 5.4e-122 sagI S ABC-2 type transporter
JIIJFFAK_00825 2.8e-168 V ABC transporter
JIIJFFAK_00826 2.5e-219 2.7.7.73, 2.7.7.80 H Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
JIIJFFAK_00827 2.5e-132 rr02 KT response regulator
JIIJFFAK_00828 3.3e-215 2.7.13.3 T signal transduction protein with a C-terminal ATPase domain
JIIJFFAK_00829 5e-125 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
JIIJFFAK_00830 1.3e-198 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
JIIJFFAK_00831 0.0 lmrA V abc transporter atp-binding protein
JIIJFFAK_00832 0.0 mdlB V abc transporter atp-binding protein
JIIJFFAK_00834 3.9e-52 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
JIIJFFAK_00835 5.6e-78 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
JIIJFFAK_00836 7.2e-24 ytrF V efflux transmembrane transporter activity
JIIJFFAK_00837 4.6e-43 V efflux transmembrane transporter activity
JIIJFFAK_00838 1.7e-59 V permease protein
JIIJFFAK_00839 6.9e-37 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JIIJFFAK_00840 7.6e-21 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
JIIJFFAK_00841 5.1e-131 2.1.1.223 S Putative SAM-dependent methyltransferase
JIIJFFAK_00842 0.0 carB 6.3.5.5 F carbamoyl-phosphate synthetase ammonia chain
JIIJFFAK_00843 5.5e-211 carA 6.3.5.5 F carbamoyl-phosphate synthetase glutamine chain
JIIJFFAK_00844 1e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
JIIJFFAK_00845 3.7e-227 pyrP F uracil Permease
JIIJFFAK_00846 3.7e-88 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
JIIJFFAK_00847 2.9e-162 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
JIIJFFAK_00848 1.5e-77 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
JIIJFFAK_00849 1.4e-167 fhuR K transcriptional regulator (lysR family)
JIIJFFAK_00855 3.2e-141 ppiA 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JIIJFFAK_00856 1.4e-75 2.7.1.199, 2.7.1.211 G PTS glucose transporter subunit IIA
JIIJFFAK_00857 9.4e-119 pts33BCA G pts system
JIIJFFAK_00858 5.8e-71 pts33BCA G pts system
JIIJFFAK_00859 4.8e-24 pts33BCA G pts system
JIIJFFAK_00860 2.4e-09 uvrX 2.7.7.7 L impB/mucB/samB family
JIIJFFAK_00861 1.8e-254 cycA E permease
JIIJFFAK_00862 4.5e-39 ynzC S UPF0291 protein
JIIJFFAK_00863 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
JIIJFFAK_00864 4.8e-176 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
JIIJFFAK_00865 1.7e-32 S membrane
JIIJFFAK_00866 1.2e-61
JIIJFFAK_00867 4.4e-26
JIIJFFAK_00868 7.4e-55
JIIJFFAK_00869 4e-220 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
JIIJFFAK_00870 1.5e-114 nptA P COG1283 Na phosphate symporter
JIIJFFAK_00871 2.9e-148 XK27_04800 S Sucrose-6F-phosphate phosphohydrolase
JIIJFFAK_00872 9.2e-105 mur1 NU mannosyl-glycoprotein
JIIJFFAK_00873 1.2e-52 glnB K Belongs to the P(II) protein family
JIIJFFAK_00874 2.9e-232 amt P Ammonium Transporter
JIIJFFAK_00875 4.6e-160 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JIIJFFAK_00876 9.5e-55 yabA L Involved in initiation control of chromosome replication
JIIJFFAK_00877 1.2e-135 yaaT S stage 0 sporulation protein
JIIJFFAK_00878 6.4e-162 holB 2.7.7.7 L dna polymerase iii
JIIJFFAK_00879 1.7e-111 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JIIJFFAK_00880 1.4e-136 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
JIIJFFAK_00881 9.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JIIJFFAK_00882 2.8e-230 ftsW D Belongs to the SEDS family
JIIJFFAK_00883 5.2e-67 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
JIIJFFAK_00884 2.7e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JIIJFFAK_00885 2.5e-158 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JIIJFFAK_00886 3.8e-279 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
JIIJFFAK_00887 3.5e-86 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JIIJFFAK_00888 3.3e-78 atpF C ATP synthase F(0) sector subunit b
JIIJFFAK_00889 2.4e-114 atpB C it plays a direct role in the translocation of protons across the membrane
JIIJFFAK_00890 3.2e-16 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JIIJFFAK_00891 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
JIIJFFAK_00892 5.9e-54 2.3.1.128, 5.2.1.8 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JIIJFFAK_00893 8e-51 S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JIIJFFAK_00894 8.9e-14 coiA 3.6.4.12 S Competence protein
JIIJFFAK_00895 2.9e-15 T peptidase
JIIJFFAK_00896 1.4e-151 rarD S Transporter
JIIJFFAK_00897 6.3e-154 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
JIIJFFAK_00898 2.3e-237 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
JIIJFFAK_00899 2.2e-130 yxkH G deacetylase
JIIJFFAK_00900 1.4e-209 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
JIIJFFAK_00901 7.9e-129 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
JIIJFFAK_00902 1.5e-222 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
JIIJFFAK_00903 1.4e-189 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
JIIJFFAK_00904 1.7e-226 mtnE 2.6.1.83 E mutations do not affect methionine salvage in vivo however
JIIJFFAK_00905 1.5e-146 cnhA 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
JIIJFFAK_00906 1.6e-121 3.4.17.14, 3.5.1.28 NU amidase activity
JIIJFFAK_00907 6.9e-179 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
JIIJFFAK_00908 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JIIJFFAK_00909 1.3e-167 prsA 3.1.3.16, 5.2.1.8 O peptidyl-prolyl cis-trans isomerase activity
JIIJFFAK_00910 5.4e-127 yrrM 2.1.1.104 S O-Methyltransferase
JIIJFFAK_00911 0.0 pepF E oligoendopeptidase F
JIIJFFAK_00912 1.4e-186 coiA 3.6.4.12 S Competence protein
JIIJFFAK_00913 1.8e-164 K transcriptional regulator (lysR family)
JIIJFFAK_00914 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JIIJFFAK_00918 8e-191 phoH T phosphate starvation-inducible protein PhoH
JIIJFFAK_00919 2.3e-61 rlpA M LysM domain protein
JIIJFFAK_00920 1.5e-123 usp 3.5.1.104, 3.5.1.28 CBM50 S pathogenesis
JIIJFFAK_00921 7.4e-35 yozE S Belongs to the UPF0346 family
JIIJFFAK_00922 1.7e-159 cvfB S Protein conserved in bacteria
JIIJFFAK_00923 9.9e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
JIIJFFAK_00924 4.9e-131 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
JIIJFFAK_00925 1.3e-120 sptS 2.7.13.3 T Histidine kinase
JIIJFFAK_00926 1.4e-45 K Acetyltransferase (GNAT) family
JIIJFFAK_00927 0.0 lmrA2 V abc transporter atp-binding protein
JIIJFFAK_00928 0.0 lmrA1 V abc transporter atp-binding protein
JIIJFFAK_00929 1.9e-77 K DNA-binding transcription factor activity
JIIJFFAK_00930 1e-69 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
JIIJFFAK_00931 1.8e-256 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
JIIJFFAK_00932 1.7e-212 nadD 2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55 H adenylyltransferase
JIIJFFAK_00933 6.5e-77 3.6.1.13, 3.6.1.55 F AdP-ribose pyrophosphatase
JIIJFFAK_00934 7.2e-25 U response to pH
JIIJFFAK_00935 0.0 yfmR S abc transporter atp-binding protein
JIIJFFAK_00936 9.6e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
JIIJFFAK_00937 3e-139 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
JIIJFFAK_00938 9.8e-91 XK27_08360 S EDD domain protein, DegV family
JIIJFFAK_00939 2.6e-64 WQ51_03320 S cog cog4835
JIIJFFAK_00940 7.7e-134 ydaF_2 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JIIJFFAK_00941 1.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
JIIJFFAK_00942 4.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
JIIJFFAK_00943 6.4e-29 2.3.1.128 K acetyltransferase
JIIJFFAK_00944 7.2e-258 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
JIIJFFAK_00945 4.9e-295 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
JIIJFFAK_00946 6.5e-229 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JIIJFFAK_00947 6.1e-213 iscS2 2.8.1.7 E Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes
JIIJFFAK_00949 2.6e-241 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
JIIJFFAK_00950 2.7e-260 gor 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JIIJFFAK_00951 0.0 fruA 2.7.1.202 G phosphotransferase system
JIIJFFAK_00952 3.8e-165 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
JIIJFFAK_00953 5.5e-122 fruR K transcriptional
JIIJFFAK_00954 8.9e-84 L Transposase
JIIJFFAK_00955 1.3e-205 rny D Endoribonuclease that initiates mRNA decay
JIIJFFAK_00956 6.6e-38 L transposase activity
JIIJFFAK_00957 1.2e-61 L transposition
JIIJFFAK_00958 5e-72 L COG2801 Transposase and inactivated derivatives
JIIJFFAK_00959 1.1e-113 K sequence-specific DNA binding
JIIJFFAK_00960 6.4e-85 C Arylsulfatase regulator (Fe-S oxidoreductase)
JIIJFFAK_00961 1.4e-74 C Arylsulfatase regulator (Fe-S oxidoreductase)
JIIJFFAK_00962 7.7e-198 V (ABC) transporter
JIIJFFAK_00963 1.7e-51 2.3.1.128 K Acetyltransferase GNAT Family
JIIJFFAK_00964 1.1e-176 S Protein of unknown function (DUF3114)
JIIJFFAK_00965 2.7e-82 S Protein of unknown function (DUF3114)
JIIJFFAK_00967 1.1e-65 tnp L Transposase
JIIJFFAK_00968 4.7e-27 L Transposase and inactivated derivatives, TnpA family
JIIJFFAK_00969 9.8e-176 gadC E Psort location CytoplasmicMembrane, score 10.00
JIIJFFAK_00970 2.3e-214 gadB 4.1.1.15 E Belongs to the group II decarboxylase family
JIIJFFAK_00971 1.1e-65 tnp L Transposase
JIIJFFAK_00972 4.7e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
JIIJFFAK_00973 1.1e-138 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
JIIJFFAK_00974 1.6e-160 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
JIIJFFAK_00975 1.7e-257 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
JIIJFFAK_00976 1.5e-71 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
JIIJFFAK_00977 7.7e-56 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
JIIJFFAK_00978 2.6e-233 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
JIIJFFAK_00979 1.6e-126 IQ reductase
JIIJFFAK_00980 2.5e-164 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
JIIJFFAK_00981 1.2e-172 fabK 1.3.1.9 S 2-Nitropropane dioxygenase
JIIJFFAK_00982 3.3e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
JIIJFFAK_00983 2.3e-173 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JIIJFFAK_00984 4e-72 marR K Transcriptional regulator, MarR family
JIIJFFAK_00985 6.9e-139 phaB 5.3.3.14, 5.3.3.18 I Belongs to the enoyl-CoA hydratase isomerase family
JIIJFFAK_00986 1.6e-114 S Haloacid dehalogenase-like hydrolase
JIIJFFAK_00987 2.4e-256 lysC 2.7.2.4 E Belongs to the aspartokinase family
JIIJFFAK_00988 8e-193 asnA 6.3.1.1 E aspartate--ammonia ligase
JIIJFFAK_00989 6.7e-259 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JIIJFFAK_00990 1.2e-130 recX 2.4.1.337 GT4 S Regulatory protein RecX
JIIJFFAK_00991 1.3e-101 ygaC J Belongs to the UPF0374 family
JIIJFFAK_00992 6.4e-108 S Domain of unknown function (DUF1803)
JIIJFFAK_00993 3.5e-166 ppaC 3.6.1.1 C inorganic pyrophosphatase
JIIJFFAK_01000 2.1e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JIIJFFAK_01001 1.7e-122 comFC S Competence protein
JIIJFFAK_01002 4.5e-252 comFA L Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
JIIJFFAK_01003 1.1e-110 yvyE 3.4.13.9 S YigZ family
JIIJFFAK_01004 3.7e-168 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
JIIJFFAK_01005 8.9e-41 acuB S IMP dehydrogenase activity
JIIJFFAK_01006 6.8e-69 acuB S IMP dehydrogenase activity
JIIJFFAK_01007 4.8e-123 livF E COG0410 ABC-type branched-chain amino acid transport systems, ATPase component
JIIJFFAK_01008 9.6e-138 livG E COG0411 ABC-type branched-chain amino acid transport systems, ATPase component
JIIJFFAK_01009 1.4e-138 livM E Belongs to the binding-protein-dependent transport system permease family
JIIJFFAK_01010 1.9e-145 livH E Belongs to the binding-protein-dependent transport system permease family
JIIJFFAK_01011 1.3e-210 livJ E COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component
JIIJFFAK_01012 7.1e-46 ylbG S UPF0298 protein
JIIJFFAK_01013 1.2e-74 ylbF S Belongs to the UPF0342 family
JIIJFFAK_01014 2.9e-105 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
JIIJFFAK_01015 4.4e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
JIIJFFAK_01018 1e-223 malY 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
JIIJFFAK_01019 4.7e-202 metB 2.5.1.48, 4.4.1.8 E cystathionine
JIIJFFAK_01020 3.3e-96 pacL 3.6.3.8, 3.6.3.9 P cation transport ATPase
JIIJFFAK_01021 4.5e-283 ytgP S Membrane protein involved in the export of O-antigen and teichoic acid
JIIJFFAK_01022 4.9e-276 murE 6.3.2.13, 6.3.2.7 M to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JIIJFFAK_01023 6e-157 femA 2.3.2.10, 2.3.2.16, 2.3.2.17, 2.3.2.18 V protein involved in methicillin resistance
JIIJFFAK_01024 3.6e-48 femA 2.3.2.10, 2.3.2.16, 2.3.2.17, 2.3.2.18 V protein involved in methicillin resistance
JIIJFFAK_01026 1.5e-25 yvdD 3.2.2.10 S cytokinin biosynthetic process
JIIJFFAK_01027 2e-22 yvdD 3.2.2.10 S Belongs to the LOG family
JIIJFFAK_01028 1.7e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JIIJFFAK_01029 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
JIIJFFAK_01030 1.4e-41 ylxQ J ribosomal protein
JIIJFFAK_01031 1e-47 ylxR K Nucleic-acid-binding protein implicated in transcription termination
JIIJFFAK_01032 3.1e-212 nusA K Participates in both transcription termination and antitermination
JIIJFFAK_01033 4.8e-79 rimP S Required for maturation of 30S ribosomal subunits
JIIJFFAK_01034 2.8e-219 brpA K Transcriptional
JIIJFFAK_01035 3.2e-92 XK27_05885 2.3.1.82 M Acetyltransferase GNAT Family
JIIJFFAK_01036 1.4e-77 ydiB 2.7.1.221, 5.1.1.1 M ATPase or kinase
JIIJFFAK_01037 1.9e-248 pbuO S permease
JIIJFFAK_01038 1e-153 yitU 3.1.3.104 S hydrolases of the HAD superfamily
JIIJFFAK_01039 1.5e-140 XK27_00940 1.2.1.70, 3.5.1.9 S Metal-dependent hydrolase
JIIJFFAK_01040 1.1e-181 manL 2.7.1.191 G pts system
JIIJFFAK_01041 5e-108 manM G pts system
JIIJFFAK_01042 1.1e-169 manN G PTS system mannose fructose sorbose family IID component
JIIJFFAK_01043 4.2e-62 manO S protein conserved in bacteria
JIIJFFAK_01044 8e-230 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JIIJFFAK_01045 3.3e-09 L PFAM Integrase, catalytic core
JIIJFFAK_01046 3.2e-12 6.3.2.2 H gamma-glutamylcysteine synthetase
JIIJFFAK_01047 1.5e-65 6.3.2.2 H gamma-glutamylcysteine synthetase
JIIJFFAK_01048 6.7e-110 6.3.2.2 H ergothioneine biosynthetic process
JIIJFFAK_01050 9e-164 fba 4.1.2.13, 4.1.2.29 G aldolase
JIIJFFAK_01051 2.2e-282 dcm 2.1.1.37 H C-5 cytosine-specific DNA methylase
JIIJFFAK_01053 5.7e-217 S MvaI/BcnI restriction endonuclease family
JIIJFFAK_01055 7.7e-13
JIIJFFAK_01056 5e-31 S Hypothetical protein (DUF2513)
JIIJFFAK_01057 6.5e-31
JIIJFFAK_01058 1e-39
JIIJFFAK_01063 6.4e-136 HJ the current gene model (or a revised gene model) may contain a frame shift
JIIJFFAK_01064 1.2e-126 gltT C Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
JIIJFFAK_01065 2.5e-13 2.3.1.82 M Acetyltransferase GNAT Family
JIIJFFAK_01066 3.3e-46 K Putative DNA-binding domain
JIIJFFAK_01067 2e-94 L PFAM Integrase, catalytic core
JIIJFFAK_01068 2e-35 L PFAM Integrase, catalytic core
JIIJFFAK_01071 3.3e-95 ywlG S Belongs to the UPF0340 family
JIIJFFAK_01072 1.2e-85 treR K trehalose operon
JIIJFFAK_01073 5.8e-21 treR K DNA-binding transcription factor activity
JIIJFFAK_01074 1.4e-54 treB 2.7.1.201 G PTS System
JIIJFFAK_01075 5.9e-66 treC 3.2.1.93 GH13 G COG0366 Glycosidases
JIIJFFAK_01076 1.5e-69 treC 3.2.1.93 GH13 G COG0366 Glycosidases
JIIJFFAK_01077 0.0 pepO 3.4.24.71 O Peptidase family M13
JIIJFFAK_01078 2.1e-52 adhE 1.1.1.1, 1.2.1.10 C Dehydrogenase
JIIJFFAK_01079 1.2e-133 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
JIIJFFAK_01080 7.3e-74 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
JIIJFFAK_01081 4.1e-22 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
JIIJFFAK_01082 6.1e-64 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
JIIJFFAK_01083 1.2e-277 thrC 4.2.3.1 E Threonine synthase
JIIJFFAK_01084 3.2e-226 norN V Mate efflux family protein
JIIJFFAK_01085 1.8e-57 asp S cog cog1302
JIIJFFAK_01086 7.6e-305 yloV S kinase related to dihydroxyacetone kinase
JIIJFFAK_01087 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
JIIJFFAK_01088 0.0 ilvB 2.2.1.6 EH Acetolactate synthase
JIIJFFAK_01089 7.7e-77 ilvN 2.2.1.6 E Acetolactate synthase
JIIJFFAK_01090 1.5e-194 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
JIIJFFAK_01091 2.1e-238 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JIIJFFAK_01092 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
JIIJFFAK_01093 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JIIJFFAK_01094 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JIIJFFAK_01095 2.9e-68 S cog cog4699
JIIJFFAK_01096 1.9e-175 comGA NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JIIJFFAK_01097 2e-152 cglB U protein transport across the cell outer membrane
JIIJFFAK_01098 8.5e-43 comGC U Required for transformation and DNA binding
JIIJFFAK_01099 1.8e-57 cglD NU Competence protein
JIIJFFAK_01100 1.4e-15 NU Type II secretory pathway pseudopilin
JIIJFFAK_01101 1.3e-70 comGF U Competence protein ComGF
JIIJFFAK_01102 5.2e-13 comGF U Putative Competence protein ComGF
JIIJFFAK_01103 1.5e-175 ytxK 2.1.1.72 L DNA methylase
JIIJFFAK_01104 8.3e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JIIJFFAK_01105 2.6e-26 lanR K sequence-specific DNA binding
JIIJFFAK_01106 1.1e-66 V CAAX protease self-immunity
JIIJFFAK_01108 8.7e-111 S CAAX amino terminal protease family protein
JIIJFFAK_01109 2.6e-94 L Integrase core domain
JIIJFFAK_01110 1.4e-36 L Integrase core domain
JIIJFFAK_01111 8.4e-49 3.2.1.4 GH5,GH9 M domain protein
JIIJFFAK_01112 2.1e-12 G gluconolactonase activity
JIIJFFAK_01113 1.3e-125 tnp L DDE domain
JIIJFFAK_01114 7.7e-17 lytN 3.5.1.104 M LysM domain
JIIJFFAK_01115 2.8e-160 L Transposase DDE domain
JIIJFFAK_01116 4.3e-41 L Protein of unknown function (DUF3991)
JIIJFFAK_01118 3.5e-32 L PFAM Integrase catalytic region
JIIJFFAK_01119 9e-88 yrdC 3.5.1.19 Q isochorismatase
JIIJFFAK_01120 1.3e-246 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
JIIJFFAK_01121 4e-167 dnaI L Primosomal protein DnaI
JIIJFFAK_01122 5e-218 dnaB L Replication initiation and membrane attachment
JIIJFFAK_01123 2.8e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JIIJFFAK_01124 3.3e-275 T PhoQ Sensor
JIIJFFAK_01125 1.8e-122 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
JIIJFFAK_01126 2.1e-91 yceD K metal-binding, possibly nucleic acid-binding protein
JIIJFFAK_01127 1.1e-130 rsmG 2.1.1.170 J Ribosomal RNA small subunit methyltransferase G
JIIJFFAK_01128 1.4e-243 P COG0168 Trk-type K transport systems, membrane components
JIIJFFAK_01129 1.4e-121 ktrA P COG0569 K transport systems, NAD-binding component
JIIJFFAK_01130 1.4e-11 ulaG S L-ascorbate 6-phosphate lactonase
JIIJFFAK_01131 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
JIIJFFAK_01132 1.2e-146 cbiQ P cobalt transport
JIIJFFAK_01133 0.0 ykoD P abc transporter atp-binding protein
JIIJFFAK_01134 8e-94 S UPF0397 protein
JIIJFFAK_01135 5.5e-158 salL 2.5.1.63, 2.5.1.94 S S-adenosyl-l-methionine hydroxide adenosyltransferase
JIIJFFAK_01136 3.9e-210 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
JIIJFFAK_01137 5.2e-98 metI P ABC transporter (Permease
JIIJFFAK_01138 1.2e-189 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JIIJFFAK_01139 1.4e-62 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase activity
JIIJFFAK_01140 1.2e-61 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase activity
JIIJFFAK_01141 4.9e-87 dapE 3.5.1.18 E COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases
JIIJFFAK_01142 7.1e-164 metQ M Belongs to the NlpA lipoprotein family
JIIJFFAK_01143 1.8e-153 ET amino acid transport
JIIJFFAK_01144 3.8e-205 EGP Transmembrane secretion effector
JIIJFFAK_01145 0.0 3.3.1.1, 3.6.1.55, 3.6.1.67 F NUDIX domain
JIIJFFAK_01146 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JIIJFFAK_01147 5.3e-153 ET amino acid transport
JIIJFFAK_01148 1.6e-131 cbiO P ABC transporter
JIIJFFAK_01149 1.1e-136 P cobalt transport protein
JIIJFFAK_01150 4.3e-175 cbiM P PDGLE domain
JIIJFFAK_01151 3.4e-160 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
JIIJFFAK_01152 9.5e-112 ureG KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
JIIJFFAK_01153 5.3e-130 ureF O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
JIIJFFAK_01154 6.6e-78 ureE O enzyme active site formation
JIIJFFAK_01155 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
JIIJFFAK_01156 7.8e-54 ureB 3.5.1.5 E Belongs to the urease beta subunit family
JIIJFFAK_01157 7.6e-46 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
JIIJFFAK_01158 6.8e-95 ureI S AmiS/UreI family transporter
JIIJFFAK_01159 5e-84 S Domain of unknown function (DUF4173)
JIIJFFAK_01160 1.8e-50 yhaI L Membrane
JIIJFFAK_01161 2.3e-129 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
JIIJFFAK_01162 1.8e-34 V protein secretion by the type I secretion system
JIIJFFAK_01163 1.2e-54 V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
JIIJFFAK_01164 7.4e-36 V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
JIIJFFAK_01165 1.2e-32 V protein secretion by the type I secretion system
JIIJFFAK_01166 5.6e-161 K sequence-specific DNA binding
JIIJFFAK_01167 4.8e-114 bcrC 3.6.1.27 I Membrane-associated phospholipid phosphatase
JIIJFFAK_01168 3.2e-90 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
JIIJFFAK_01169 7.9e-96 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
JIIJFFAK_01170 1.3e-246 trkA P Potassium transporter peripheral membrane component
JIIJFFAK_01171 1.2e-258 trkH P Cation transport protein
JIIJFFAK_01172 1.2e-39 yidD S Could be involved in insertion of integral membrane proteins into the membrane
JIIJFFAK_01173 6.1e-140 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
JIIJFFAK_01174 3e-99 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JIIJFFAK_01175 3.8e-120 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JIIJFFAK_01176 4.5e-135 xerD L tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site
JIIJFFAK_01177 7.8e-85 ykuL S CBS domain
JIIJFFAK_01178 3.5e-99 XK27_09740 S Phosphoesterase
JIIJFFAK_01179 7.1e-186 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
JIIJFFAK_01180 3.8e-148 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
JIIJFFAK_01181 7.6e-36 yneF S UPF0154 protein
JIIJFFAK_01182 3.7e-91 K transcriptional regulator
JIIJFFAK_01183 9.6e-244 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
JIIJFFAK_01186 8.8e-98 ybhL S Belongs to the BI1 family
JIIJFFAK_01187 6.1e-93 XK27_09705 6.1.1.14 S HD superfamily hydrolase
JIIJFFAK_01188 6.4e-131 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JIIJFFAK_01189 7e-46 acyP 3.6.1.7 C Belongs to the acylphosphatase family
JIIJFFAK_01190 8.5e-165 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
JIIJFFAK_01191 5.2e-59 L Integrase core domain protein
JIIJFFAK_01192 1.6e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
JIIJFFAK_01193 0.0 mltG ADL Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JIIJFFAK_01194 2.1e-82 XK27_09675 K -acetyltransferase
JIIJFFAK_01195 4.4e-255 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
JIIJFFAK_01196 2.5e-23
JIIJFFAK_01197 0.0 snf 2.7.11.1 L Superfamily II DNA RNA helicases, SNF2 family'
JIIJFFAK_01198 2.5e-296 mapZ D Early cell division protein that marks the future cell division site and supports proper FtsZ ring positioning
JIIJFFAK_01199 1.5e-222 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
JIIJFFAK_01200 5.6e-50 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
JIIJFFAK_01201 8.9e-95 ypsA S Belongs to the UPF0398 family
JIIJFFAK_01202 2.5e-109 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
JIIJFFAK_01203 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
JIIJFFAK_01204 5.1e-259 pepC 3.4.22.40 E aminopeptidase
JIIJFFAK_01205 1.9e-77 yhaI L Membrane
JIIJFFAK_01206 2.1e-151 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
JIIJFFAK_01207 1.3e-279 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JIIJFFAK_01208 1e-139 S COG1073 Hydrolases of the alpha beta superfamily
JIIJFFAK_01209 2.6e-76 S thiolester hydrolase activity
JIIJFFAK_01211 3.8e-40 K transcriptional
JIIJFFAK_01213 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
JIIJFFAK_01214 4.5e-135 glcR K transcriptional regulator (DeoR family)
JIIJFFAK_01215 1.1e-34 cof Q phosphatase activity
JIIJFFAK_01216 6e-55 cof Q phosphatase activity
JIIJFFAK_01217 4.6e-85 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I phosphatidate phosphatase activity
JIIJFFAK_01218 8.4e-96 nusG K Participates in transcription elongation, termination and antitermination
JIIJFFAK_01219 5.7e-25 secE U Belongs to the SecE SEC61-gamma family
JIIJFFAK_01220 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
JIIJFFAK_01221 1.2e-165 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
JIIJFFAK_01222 6.8e-56 S TM2 domain
JIIJFFAK_01223 4.7e-43
JIIJFFAK_01226 6.4e-18 L transposase activity
JIIJFFAK_01227 4.4e-37 L Transposase
JIIJFFAK_01228 4.1e-287 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
JIIJFFAK_01229 1.3e-42 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
JIIJFFAK_01230 5.2e-142 cmpC S abc transporter atp-binding protein
JIIJFFAK_01231 0.0 WQ51_06230 S ABC transporter substrate binding protein
JIIJFFAK_01232 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
JIIJFFAK_01233 1.4e-231 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
JIIJFFAK_01234 2.2e-145 cdsA 2.7.7.41 S Belongs to the CDS family
JIIJFFAK_01235 1.1e-141 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JIIJFFAK_01236 9.8e-50 yajC U protein transport
JIIJFFAK_01237 1.9e-127 yeeN K transcriptional regulatory protein
JIIJFFAK_01238 1.1e-256 pgi 5.3.1.9 G Belongs to the GPI family
JIIJFFAK_01239 6.6e-150 rgfB 3.1.3.90 L endonuclease exonuclease phosphatase family protein
JIIJFFAK_01240 4.8e-106 ptsG 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
JIIJFFAK_01241 2.1e-150 ptsG 2.7.1.199, 2.7.1.208, 2.7.1.211 G pts system
JIIJFFAK_01242 5.6e-65 ptsG 2.7.1.199, 2.7.1.208 G pts system
JIIJFFAK_01243 4.8e-163 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
JIIJFFAK_01244 9.3e-131 adcB P ABC transporter (Permease
JIIJFFAK_01245 1.1e-135 adcC P ABC transporter, ATP-binding protein
JIIJFFAK_01246 9.1e-72 adcR K transcriptional
JIIJFFAK_01247 1.9e-223 EGP Major facilitator Superfamily
JIIJFFAK_01248 7.4e-183 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JIIJFFAK_01249 1.1e-161 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
JIIJFFAK_01250 6.4e-23
JIIJFFAK_01251 3.4e-62 oppF P Belongs to the ABC transporter superfamily
JIIJFFAK_01252 7.5e-62 oppF P Belongs to the ABC transporter superfamily
JIIJFFAK_01253 2.7e-41 oppD P Belongs to the ABC transporter superfamily
JIIJFFAK_01254 1.2e-62 oppD P Belongs to the ABC transporter superfamily
JIIJFFAK_01255 2.5e-32 oppD P Belongs to the ABC transporter superfamily
JIIJFFAK_01256 3e-27 oppD P Belongs to the ABC transporter superfamily
JIIJFFAK_01257 1.4e-38 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
JIIJFFAK_01258 1.7e-33 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
JIIJFFAK_01259 6.6e-11 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
JIIJFFAK_01260 4.2e-27 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
JIIJFFAK_01261 2e-138 oppA E ABC transporter substrate-binding protein
JIIJFFAK_01262 7e-10 oppA E ABC transporter substrate-binding protein
JIIJFFAK_01263 2.2e-273 sufB O assembly protein SufB
JIIJFFAK_01264 2.5e-74 nifU C SUF system FeS assembly protein, NifU family
JIIJFFAK_01265 7.7e-238 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JIIJFFAK_01266 6.3e-235 sufD O assembly protein SufD
JIIJFFAK_01267 9.5e-144 sufC O ABC-type transport system involved in Fe-S cluster assembly, ATPase component
JIIJFFAK_01268 5.5e-185 tagO 2.7.8.33, 2.7.8.35 M transferase
JIIJFFAK_01269 5.2e-136 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
JIIJFFAK_01270 3.1e-153 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
JIIJFFAK_01271 5.8e-275 glnP P ABC transporter
JIIJFFAK_01272 1e-123 glnQ E abc transporter atp-binding protein
JIIJFFAK_01273 5e-94 V VanZ like family
JIIJFFAK_01274 9.2e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
JIIJFFAK_01275 6.5e-202 yhjX P Major Facilitator
JIIJFFAK_01276 5.3e-113 fnr5 K Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
JIIJFFAK_01277 3.3e-112 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
JIIJFFAK_01278 1.7e-237 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JIIJFFAK_01279 3.9e-46 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
JIIJFFAK_01280 2.1e-58 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
JIIJFFAK_01281 2e-27 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
JIIJFFAK_01282 1.4e-09 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
JIIJFFAK_01283 3.3e-74 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
JIIJFFAK_01284 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JIIJFFAK_01285 3.8e-81 nrdI F Belongs to the NrdI family
JIIJFFAK_01286 6.3e-186 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
JIIJFFAK_01287 5.4e-139 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
JIIJFFAK_01288 1.4e-42 F nucleotide catabolic process
JIIJFFAK_01289 4.4e-135 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
JIIJFFAK_01290 2e-177 prmA J Ribosomal protein L11 methyltransferase
JIIJFFAK_01291 3.7e-81 mutT3 3.6.1.13, 3.6.1.55 L NUDIX domain
JIIJFFAK_01292 1.1e-83 XK27_03960 S Protein of unknown function (DUF3013)
JIIJFFAK_01293 7.6e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
JIIJFFAK_01294 4.8e-73 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
JIIJFFAK_01295 6.4e-219 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
JIIJFFAK_01296 9.3e-150 ykuT M mechanosensitive ion channel
JIIJFFAK_01297 1.6e-77 sigH K DNA-templated transcription, initiation
JIIJFFAK_01298 1e-84
JIIJFFAK_01299 3.2e-233 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
JIIJFFAK_01300 1.8e-56 amd 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
JIIJFFAK_01301 9.9e-19 S Domain of unknown function (DUF4649)
JIIJFFAK_01302 2.5e-169 L Transposase
JIIJFFAK_01303 0.0 amiA E ABC transporter, substrate-binding protein, family 5
JIIJFFAK_01305 1.7e-60 hmpT S membrane
JIIJFFAK_01306 6.2e-137 thiD 2.7.1.35, 2.7.1.49, 2.7.4.7 H phosphomethylpyrimidine kinase
JIIJFFAK_01307 7.7e-140 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
JIIJFFAK_01308 9.1e-185 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
JIIJFFAK_01309 7.5e-298 dnaK O Heat shock 70 kDa protein
JIIJFFAK_01310 1.3e-71 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
JIIJFFAK_01311 5.3e-198 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
JIIJFFAK_01312 1.3e-102 acmA 3.2.1.17 NU amidase activity
JIIJFFAK_01313 1.6e-143 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
JIIJFFAK_01314 2.2e-38 ais G alpha-ribazole phosphatase activity
JIIJFFAK_01315 1.9e-242 XK27_08635 S UPF0210 protein
JIIJFFAK_01316 3.6e-39 gcvR T UPF0237 protein
JIIJFFAK_01317 3.3e-225 capA M Bacterial capsule synthesis protein
JIIJFFAK_01318 5.7e-91 tnp L Transposase
JIIJFFAK_01319 3.4e-75 isp2 S pathogenesis
JIIJFFAK_01321 4.9e-173
JIIJFFAK_01322 1.8e-38 S Helix-turn-helix domain
JIIJFFAK_01323 2.2e-224 int L Belongs to the 'phage' integrase family
JIIJFFAK_01325 0.0 res_1 3.1.21.5 S DEAD-like helicases superfamily
JIIJFFAK_01328 5.3e-18 D FtsK/SpoIIIE family
JIIJFFAK_01329 1.3e-134 D ftsk spoiiie
JIIJFFAK_01331 1.3e-154
JIIJFFAK_01332 1.7e-22
JIIJFFAK_01333 9.3e-184 L Phage integrase family
JIIJFFAK_01334 6.5e-90 3.6.4.12 K Divergent AAA domain protein
JIIJFFAK_01335 5.9e-24 3.6.4.12
JIIJFFAK_01336 2.5e-183 EGP Major facilitator Superfamily
JIIJFFAK_01337 2.4e-231 spaC2 V Lanthionine synthetase C family protein
JIIJFFAK_01338 0.0 S Lantibiotic dehydratase, C terminus
JIIJFFAK_01340 1.5e-35 K sequence-specific DNA binding
JIIJFFAK_01341 9.5e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
JIIJFFAK_01342 2e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
JIIJFFAK_01343 3.6e-57 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JIIJFFAK_01344 1.6e-94 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JIIJFFAK_01345 2.3e-31 K helix-turn-helix
JIIJFFAK_01346 3.4e-155 degV S DegV family
JIIJFFAK_01347 3.5e-91 yacP S RNA-binding protein containing a PIN domain
JIIJFFAK_01348 5.7e-135 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JIIJFFAK_01351 4.2e-68 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
JIIJFFAK_01352 1.7e-259 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
JIIJFFAK_01353 1.1e-112 cysE 2.3.1.30 E serine acetyltransferase
JIIJFFAK_01354 4.5e-143 S SseB protein N-terminal domain
JIIJFFAK_01355 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
JIIJFFAK_01356 1.2e-230 dacA 3.4.16.4 M Belongs to the peptidase S11 family
JIIJFFAK_01357 8.4e-53 dacA 3.4.16.4 M Belongs to the peptidase S11 family
JIIJFFAK_01358 8.1e-151 dacA 3.4.16.4 M Belongs to the peptidase S11 family
JIIJFFAK_01359 0.0 clpC O Belongs to the ClpA ClpB family
JIIJFFAK_01360 2.4e-75 ctsR K Belongs to the CtsR family
JIIJFFAK_01361 1.1e-83 S Putative small multi-drug export protein
JIIJFFAK_01362 1.7e-182 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JIIJFFAK_01363 6.3e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
JIIJFFAK_01366 1.9e-86 yocD 3.4.17.13 V proteins, homologs of microcin C7 resistance protein MccF
JIIJFFAK_01367 7.3e-22 yocD 3.4.17.13 V carboxypeptidase activity
JIIJFFAK_01368 3.2e-40 L transposition
JIIJFFAK_01369 1e-87 L Integrase core domain protein
JIIJFFAK_01370 1.7e-96 S reductase
JIIJFFAK_01371 1.8e-26 badR K DNA-binding transcription factor activity
JIIJFFAK_01372 5.5e-36 XK27_02060 S Transglycosylase associated protein
JIIJFFAK_01373 5.7e-222 pepS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
JIIJFFAK_01374 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JIIJFFAK_01379 1.9e-07
JIIJFFAK_01381 1.1e-65 spxA_2 1.20.4.1 P Belongs to the ArsC family
JIIJFFAK_01382 2e-195 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
JIIJFFAK_01383 1e-232 cinA 3.5.1.42 S Belongs to the CinA family
JIIJFFAK_01384 6.4e-107 tag 3.2.2.20 L 3-methyladenine DNA glycosylase
JIIJFFAK_01385 7.8e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
JIIJFFAK_01387 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
JIIJFFAK_01389 1.2e-61 KT phosphorelay signal transduction system
JIIJFFAK_01390 7e-34 S Protein of unknown function (DUF3021)
JIIJFFAK_01391 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JIIJFFAK_01392 1e-57 ymcA 3.6.3.21 S Belongs to the UPF0342 family
JIIJFFAK_01393 8.2e-70 argR K Regulates arginine biosynthesis genes
JIIJFFAK_01394 2.6e-09 L Transposase
JIIJFFAK_01395 0.0 argS 6.1.1.19 J Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
JIIJFFAK_01396 8.7e-248 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JIIJFFAK_01397 9.2e-141 1.1.1.169 H Ketopantoate reductase
JIIJFFAK_01398 2.2e-204 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JIIJFFAK_01399 4.9e-76 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JIIJFFAK_01400 3.4e-241 purD 6.3.4.13 F Belongs to the GARS family
JIIJFFAK_01401 2.3e-161 S CHAP domain
JIIJFFAK_01402 1.4e-33 L Integrase core domain protein
JIIJFFAK_01403 1.4e-48 L transposition
JIIJFFAK_01404 4.8e-76 L transposase activity
JIIJFFAK_01405 1.2e-293 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
JIIJFFAK_01406 1.4e-101 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JIIJFFAK_01407 1.8e-184 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
JIIJFFAK_01408 1.3e-276 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JIIJFFAK_01409 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JIIJFFAK_01410 2e-129 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
JIIJFFAK_01411 4.2e-34 acpP1 IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
JIIJFFAK_01412 1.3e-179 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
JIIJFFAK_01413 2.6e-143 recO L Involved in DNA repair and RecF pathway recombination
JIIJFFAK_01414 2.9e-218 araT 2.6.1.1 E Aminotransferase
JIIJFFAK_01415 1.2e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JIIJFFAK_01416 1.7e-90 usp 3.5.1.28 CBM50 S CHAP domain
JIIJFFAK_01417 6.3e-88 mreD M Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
JIIJFFAK_01418 5.5e-139 mreC M Involved in formation and maintenance of cell shape
JIIJFFAK_01424 5.3e-11
JIIJFFAK_01433 2.3e-23 tmp1 S Domain of unknown function (DUF4391)
JIIJFFAK_01434 0.0 L helicase superfamily c-terminal domain
JIIJFFAK_01435 8.8e-30 S Protein of unknown function DUF262
JIIJFFAK_01436 2.4e-136
JIIJFFAK_01437 8.1e-157
JIIJFFAK_01438 3.5e-169 L T/G mismatch-specific endonuclease activity
JIIJFFAK_01439 0.0 L DNA helicase
JIIJFFAK_01440 1.5e-135 4.1.1.86 E Pyridoxal-dependent decarboxylase conserved domain
JIIJFFAK_01441 2.7e-34 M Psort location Cytoplasmic, score
JIIJFFAK_01443 5.4e-48 M Glycosyltransferase, group 2 family protein
JIIJFFAK_01444 4.4e-130 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JIIJFFAK_01445 2e-205 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
JIIJFFAK_01446 4.1e-09 S Domain of unknown function (DUF4651)
JIIJFFAK_01447 2.1e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
JIIJFFAK_01448 7.9e-114 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
JIIJFFAK_01449 2.6e-68 yeeE S Sulphur transport
JIIJFFAK_01450 2e-109 yeeE S Sulphur transport
JIIJFFAK_01451 1.9e-36 yeeD O sulfur carrier activity
JIIJFFAK_01452 5.1e-66 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
JIIJFFAK_01453 1e-90 tadA 3.5.4.1, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
JIIJFFAK_01456 4.1e-158 rrmA 2.1.1.187 Q methyltransferase
JIIJFFAK_01457 1.5e-64 S phosphatase activity
JIIJFFAK_01458 1.9e-46 S glycolate biosynthetic process
JIIJFFAK_01459 8.1e-59 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
JIIJFFAK_01460 1.3e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
JIIJFFAK_01461 8.5e-93 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JIIJFFAK_01462 7.5e-118 gluP 3.4.21.105 O membrane protein (homolog of Drosophila rhomboid)
JIIJFFAK_01463 1.6e-168 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
JIIJFFAK_01464 4.4e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
JIIJFFAK_01465 1.3e-83 XK27_08585 S Psort location CytoplasmicMembrane, score
JIIJFFAK_01466 2.5e-116 fnt P Formate nitrite transporter
JIIJFFAK_01467 1.5e-220 XK27_09615 C reductase
JIIJFFAK_01468 6.2e-76 XK27_09620 S reductase
JIIJFFAK_01469 4.7e-20 XK27_09620 S FMN reductase (NADPH) activity
JIIJFFAK_01470 1.1e-80 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
JIIJFFAK_01471 1.4e-226 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JIIJFFAK_01472 6.2e-12 WQ51_05710 S Mitochondrial biogenesis AIM24
JIIJFFAK_01473 7.3e-59 WQ51_05710 S Mitochondrial biogenesis AIM24
JIIJFFAK_01474 2e-88 cah 4.2.1.1 P Reversible hydration of carbon dioxide
JIIJFFAK_01475 1.6e-193 pepO 3.4.24.71 O Peptidase family M13
JIIJFFAK_01476 2.6e-230 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
JIIJFFAK_01477 3.4e-19 L DDE superfamily endonuclease
JIIJFFAK_01478 8.4e-242 M LPXTG cell wall anchor motif
JIIJFFAK_01479 1.5e-101 3.4.22.70 M Sortase family
JIIJFFAK_01480 9.2e-51 S Protein of unknown function (DUF3397)
JIIJFFAK_01481 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
JIIJFFAK_01482 4.8e-120 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
JIIJFFAK_01483 7.3e-69 amiA E transmembrane transport
JIIJFFAK_01484 6.7e-81 amiA E transmembrane transport
JIIJFFAK_01485 2.1e-282 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JIIJFFAK_01486 2e-230 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
JIIJFFAK_01487 4.1e-264 argH 4.3.2.1 E Argininosuccinate lyase
JIIJFFAK_01488 5.9e-55 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
JIIJFFAK_01489 7.5e-141 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
JIIJFFAK_01490 2e-186 jag S RNA-binding protein
JIIJFFAK_01491 1e-13 rpmH J Ribosomal protein L34
JIIJFFAK_01492 1.1e-83 L Transposase
JIIJFFAK_01493 6.3e-226 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
JIIJFFAK_01495 2.2e-54 bta 1.8.1.8 CO cell redox homeostasis
JIIJFFAK_01496 2e-09 L thioesterase
JIIJFFAK_01497 1.9e-141 S Macro domain protein
JIIJFFAK_01498 1.1e-50 trxA O Belongs to the thioredoxin family
JIIJFFAK_01499 1.6e-143 tatD L Hydrolase, tatd
JIIJFFAK_01500 1.1e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JIIJFFAK_01501 6.2e-157 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
JIIJFFAK_01503 4.1e-161 rsgA 3.1.3.100 G One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
JIIJFFAK_01504 3e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
JIIJFFAK_01505 1.2e-117 thiN 2.7.6.2 H thiamine pyrophosphokinase
JIIJFFAK_01506 6.9e-173 rmuC S RmuC domain protein
JIIJFFAK_01507 1.2e-177 cbf S 3'-5' exoribonuclease yhaM
JIIJFFAK_01508 5.3e-142 purR 2.4.2.7 F operon repressor
JIIJFFAK_01509 2.3e-69 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
JIIJFFAK_01510 6.7e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
JIIJFFAK_01511 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JIIJFFAK_01512 1.8e-187 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
JIIJFFAK_01513 5.7e-43 L transposase activity
JIIJFFAK_01514 2e-222 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
JIIJFFAK_01515 3.1e-30
JIIJFFAK_01516 1.5e-12
JIIJFFAK_01517 1.3e-87 S Fusaric acid resistance protein-like
JIIJFFAK_01518 8.5e-63 glnR K Transcriptional regulator
JIIJFFAK_01519 1.5e-263 glnA 6.3.1.2 E glutamine synthetase
JIIJFFAK_01520 2.7e-40 pscB M CHAP domain protein
JIIJFFAK_01521 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JIIJFFAK_01522 2.5e-33 ykzG S Belongs to the UPF0356 family
JIIJFFAK_01523 5.6e-121 yeaZ 2.3.1.234 O COG1214, inactive homolog of metal-dependent proteases
JIIJFFAK_01524 1.3e-73 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
JIIJFFAK_01525 1.9e-186 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JIIJFFAK_01526 1.8e-114 azlC E AzlC protein
JIIJFFAK_01527 8.8e-48 azlD E branched-chain amino acid
JIIJFFAK_01528 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
JIIJFFAK_01529 1.3e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
JIIJFFAK_01530 4.7e-160 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JIIJFFAK_01531 2.3e-13 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
JIIJFFAK_01532 1e-93 cvpA S toxin biosynthetic process
JIIJFFAK_01533 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
JIIJFFAK_01534 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JIIJFFAK_01539 2.5e-230 mutY L A G-specific adenine glycosylase
JIIJFFAK_01540 3.6e-41 XK27_05745
JIIJFFAK_01541 3.9e-47 rpsF J Binds together with S18 to 16S ribosomal RNA
JIIJFFAK_01542 2.7e-91 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
JIIJFFAK_01543 9.7e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JIIJFFAK_01545 3.1e-124 XK27_01040 S Pfam PF06570
JIIJFFAK_01546 2e-169 corA P COG0598 Mg2 and Co2 transporters
JIIJFFAK_01547 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
JIIJFFAK_01550 7.7e-11 V 'abc transporter, ATP-binding protein
JIIJFFAK_01553 7.2e-192 pepP 3.4.11.9, 3.4.13.9 E Belongs to the peptidase M24B family
JIIJFFAK_01554 1.1e-83 comEB 3.5.4.12 F ComE operon protein 2
JIIJFFAK_01555 9.3e-98 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JIIJFFAK_01556 3.4e-62 yqhY S protein conserved in bacteria
JIIJFFAK_01557 2.1e-73 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JIIJFFAK_01558 1.7e-179 scrR K Transcriptional
JIIJFFAK_01559 4.1e-291 scrB 3.2.1.26 GH32 G invertase
JIIJFFAK_01560 0.0 scrA 2.7.1.211 G pts system
JIIJFFAK_01561 4.1e-172 scrK 2.7.1.2, 2.7.1.4 GK Fructokinase
JIIJFFAK_01562 3e-189 manA 5.3.1.8 G mannose-6-phosphate isomerase
JIIJFFAK_01564 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
JIIJFFAK_01565 2.9e-198 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JIIJFFAK_01566 1.1e-197 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
JIIJFFAK_01567 4.1e-62 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
JIIJFFAK_01568 1.5e-184 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JIIJFFAK_01569 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JIIJFFAK_01570 1.5e-172 ansA 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
JIIJFFAK_01571 2.5e-261 XK27_03190 5.2.1.8 S hydrolases of the HAD superfamily
JIIJFFAK_01572 2.9e-18 yebC M Membrane
JIIJFFAK_01573 1.6e-79 yebC M Membrane
JIIJFFAK_01574 3.5e-17 KT response to antibiotic
JIIJFFAK_01575 8.5e-68 KT response to antibiotic
JIIJFFAK_01576 5.4e-10 XK27_02470 K LytTr DNA-binding domain protein
JIIJFFAK_01577 3.4e-57 liaI S membrane
JIIJFFAK_01578 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
JIIJFFAK_01579 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
JIIJFFAK_01580 9.3e-122 S Protein of unknown function (DUF554)
JIIJFFAK_01581 2.1e-129 ecsA_2 V abc transporter atp-binding protein
JIIJFFAK_01582 9.2e-284 XK27_00765
JIIJFFAK_01583 4.4e-141 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JIIJFFAK_01584 6.9e-210 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
JIIJFFAK_01585 2e-22 D nuclear chromosome segregation
JIIJFFAK_01586 2.8e-21 yhaI J Protein of unknown function (DUF805)
JIIJFFAK_01587 3.4e-58
JIIJFFAK_01588 2.2e-85
JIIJFFAK_01589 3.9e-173 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
JIIJFFAK_01590 8.1e-46 ftsL D cell division protein FtsL
JIIJFFAK_01591 0.0 ftsI 3.4.16.4 M penicillin-binding protein
JIIJFFAK_01592 6.3e-185 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JIIJFFAK_01593 3.2e-221 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
JIIJFFAK_01595 4.8e-268 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
JIIJFFAK_01596 2.4e-66 yutD J protein conserved in bacteria
JIIJFFAK_01597 7.9e-224 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
JIIJFFAK_01598 1.7e-93 XK27_09885 V Glycopeptide antibiotics resistance protein
JIIJFFAK_01600 0.0 mdlA V abc transporter atp-binding protein
JIIJFFAK_01601 0.0 mdlB V abc transporter atp-binding protein
JIIJFFAK_01602 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
JIIJFFAK_01603 4e-235 mesE M Transport protein ComB
JIIJFFAK_01605 1.4e-237 blpH 2.7.13.3 T protein histidine kinase activity
JIIJFFAK_01606 4.4e-132 agrA KT phosphorelay signal transduction system
JIIJFFAK_01609 4.3e-25 S Bacteriocin class II with double-glycine leader peptide
JIIJFFAK_01614 6.7e-98 blpT
JIIJFFAK_01615 2.9e-28 blpT
JIIJFFAK_01616 3e-47 spiA K sequence-specific DNA binding
JIIJFFAK_01619 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
JIIJFFAK_01620 2.3e-164 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
JIIJFFAK_01621 5e-44 V CAAX protease self-immunity
JIIJFFAK_01622 4.6e-140 cppA E CppA N-terminal
JIIJFFAK_01623 4.5e-185 ampC V COG1680 Beta-lactamase class C and other penicillin binding proteins
JIIJFFAK_01624 4.4e-115 ybbL S abc transporter atp-binding protein
JIIJFFAK_01625 1.5e-127 ybbM S transport system, permease component
JIIJFFAK_01626 1.4e-33 D nuclear chromosome segregation
JIIJFFAK_01627 7.2e-46 hsdS_1 3.1.21.3 V type I restriction modification DNA specificity domain
JIIJFFAK_01628 2.1e-85 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
JIIJFFAK_01629 1.8e-147 cah 4.2.1.1 P carbonic anhydrase
JIIJFFAK_01630 0.0 pflB 2.3.1.54 C formate acetyltransferase'
JIIJFFAK_01631 1.3e-204 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JIIJFFAK_01633 8.8e-153 yxeM ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
JIIJFFAK_01634 1.4e-159 yxeN P ABC transporter (Permease
JIIJFFAK_01635 1.3e-131 tcyN 3.6.3.21 E abc transporter atp-binding protein
JIIJFFAK_01636 6.1e-08 S Protein of unknown function (DUF4059)
JIIJFFAK_01637 1.9e-172 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
JIIJFFAK_01638 5.1e-93 rsmD 2.1.1.171 L Methyltransferase
JIIJFFAK_01639 2e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JIIJFFAK_01640 8.4e-196 ylbL T Belongs to the peptidase S16 family
JIIJFFAK_01641 1.3e-184 yhcC S radical SAM protein
JIIJFFAK_01642 1.4e-98 ytqB 2.1.1.176 J (SAM)-dependent
JIIJFFAK_01644 0.0 yjcE P NhaP-type Na H and K H antiporters
JIIJFFAK_01645 2.4e-144 modF 3.6.3.21, 3.6.3.34 P abc transporter atp-binding protein
JIIJFFAK_01646 2e-239 hlyX S COG1253 Hemolysins and related proteins containing CBS domains
JIIJFFAK_01647 2e-157 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JIIJFFAK_01650 2.4e-75 XK27_03180 T universal stress protein
JIIJFFAK_01651 6.2e-240 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase
JIIJFFAK_01652 1.2e-140 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
JIIJFFAK_01653 3.4e-100 pncA Q isochorismatase
JIIJFFAK_01654 2.1e-154 hlpA M Belongs to the NlpA lipoprotein family
JIIJFFAK_01655 3.6e-96 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JIIJFFAK_01656 5.1e-77 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
JIIJFFAK_01657 1e-148 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
JIIJFFAK_01658 6.3e-31 M lipopolysaccharide 3-alpha-galactosyltransferase activity
JIIJFFAK_01659 1.4e-47 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JIIJFFAK_01660 1.6e-269 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
JIIJFFAK_01661 8.7e-273 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JIIJFFAK_01662 4e-59
JIIJFFAK_01663 6.7e-154 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
JIIJFFAK_01664 1.8e-98 yqeG S hydrolase of the HAD superfamily
JIIJFFAK_01665 1.7e-215 yqeH S in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
JIIJFFAK_01666 3.5e-49 yhbY J RNA-binding protein
JIIJFFAK_01667 3.1e-118 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JIIJFFAK_01668 1.4e-107 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
JIIJFFAK_01669 6e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
JIIJFFAK_01670 2e-140 yqeM Q Methyltransferase domain protein
JIIJFFAK_01671 2.7e-202 ylbM S Belongs to the UPF0348 family
JIIJFFAK_01672 0.0 clpL O ATP-dependent Clp protease ATP-binding subunit
JIIJFFAK_01673 6.5e-55
JIIJFFAK_01674 4.8e-11
JIIJFFAK_01675 5e-72 hit FG Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
JIIJFFAK_01676 2.3e-133 ecsA V abc transporter atp-binding protein
JIIJFFAK_01677 1.6e-183 ecsB U ABC transporter
JIIJFFAK_01678 1.2e-151 ytmP 2.7.1.89 M Phosphotransferase
JIIJFFAK_01679 3.1e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
JIIJFFAK_01681 7.7e-227 ytfP S Flavoprotein
JIIJFFAK_01682 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
JIIJFFAK_01683 7.4e-64 XK27_02560 S cog cog2151
JIIJFFAK_01684 9.1e-42 WQ51_02910 S Protein of unknown function, DUF536
JIIJFFAK_01685 1.3e-105 dnaQ 2.7.7.7 L DNA polymerase III
JIIJFFAK_01686 5.3e-119 K transcriptional regulator, MerR family
JIIJFFAK_01687 5.1e-47 L transposase activity
JIIJFFAK_01688 1.2e-43 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
JIIJFFAK_01689 3.9e-26
JIIJFFAK_01690 0.0 ctpE P E1-E2 ATPase
JIIJFFAK_01691 3.2e-56
JIIJFFAK_01692 3.7e-42 pchB 2.5.1.19, 4.2.1.10, 4.2.99.21, 5.4.99.5 E Chorismate mutase
JIIJFFAK_01693 1.5e-255 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JIIJFFAK_01694 2.3e-104 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH anthranilate
JIIJFFAK_01695 1.5e-178 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
JIIJFFAK_01696 1.9e-133 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
JIIJFFAK_01697 3e-99 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E belongs to the TrpF family
JIIJFFAK_01698 2.1e-227 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
JIIJFFAK_01699 2.1e-143 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
JIIJFFAK_01700 2.7e-73 copY K Copper transport repressor, CopY TcrY family
JIIJFFAK_01701 0.0 copA 3.6.3.54 P P-type ATPase
JIIJFFAK_01702 4.7e-31 copZ 2.7.7.77 P Heavy metal-associated domain protein
JIIJFFAK_01703 1.7e-193 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
JIIJFFAK_01704 6e-115 papP P ABC transporter (Permease
JIIJFFAK_01705 3e-106 P ABC transporter (Permease
JIIJFFAK_01706 1.7e-134 glnQ 3.6.3.21 E abc transporter atp-binding protein
JIIJFFAK_01707 1.1e-155 cjaA ET ABC transporter substrate-binding protein
JIIJFFAK_01711 1.5e-258 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
JIIJFFAK_01712 7.9e-120 ywaF S Integral membrane protein (intg_mem_TP0381)
JIIJFFAK_01713 3.1e-300 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
JIIJFFAK_01714 1.6e-200 yjbB G Permeases of the major facilitator superfamily
JIIJFFAK_01715 2.1e-157 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
JIIJFFAK_01716 7.8e-100 thiT S Thiamine transporter
JIIJFFAK_01717 1.9e-62 yjqA S Bacterial PH domain
JIIJFFAK_01718 2.3e-154 corA P CorA-like protein
JIIJFFAK_01719 3.2e-252 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
JIIJFFAK_01721 1e-41 yazA L endonuclease containing a URI domain
JIIJFFAK_01722 2.3e-139 yabB 2.1.1.223 L Methyltransferase
JIIJFFAK_01723 4.1e-22 nodB3 G polysaccharide deacetylase
JIIJFFAK_01724 1.7e-77 nodB3 G polysaccharide deacetylase
JIIJFFAK_01725 8.3e-142 plsC 2.3.1.51 I Acyltransferase
JIIJFFAK_01726 2.2e-96 comEA L COG1555 DNA uptake protein and related DNA-binding proteins
JIIJFFAK_01727 0.0 comEC S Competence protein ComEC
JIIJFFAK_01728 1e-232 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JIIJFFAK_01729 2.4e-98 XK27_07830 2.3.1.128 J Acetyltransferase GNAT Family
JIIJFFAK_01730 3.3e-231 ytoI K transcriptional regulator containing CBS domains
JIIJFFAK_01731 1.5e-166 map 3.4.11.18 E Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed
JIIJFFAK_01732 7.4e-164 rbn E Belongs to the UPF0761 family
JIIJFFAK_01733 3.7e-85 ccl S cog cog4708
JIIJFFAK_01734 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JIIJFFAK_01735 5.7e-186 yegS 2.7.1.107 I Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
JIIJFFAK_01736 1.9e-55 L Transposase
JIIJFFAK_01737 2.1e-74 S QueT transporter
JIIJFFAK_01738 8.2e-159 xth 3.1.11.2 L exodeoxyribonuclease III
JIIJFFAK_01739 6.9e-172 tehB 2.1.1.265 PQ tellurite resistance protein tehb
JIIJFFAK_01740 2.4e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
JIIJFFAK_01741 4.1e-37 ylqC L Belongs to the UPF0109 family
JIIJFFAK_01742 1.1e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
JIIJFFAK_01743 0.0 ydaO E amino acid
JIIJFFAK_01744 1e-99 folE 3.5.4.16 F gtp cyclohydrolase
JIIJFFAK_01745 1.2e-146 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JIIJFFAK_01746 1.2e-298 amy 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
JIIJFFAK_01747 1.2e-61 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JIIJFFAK_01748 2.9e-87 folK 2.7.6.3, 4.1.2.25 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JIIJFFAK_01749 7.8e-171 murB 1.3.1.98 M cell wall formation
JIIJFFAK_01750 6.2e-213 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
JIIJFFAK_01751 3.7e-140 potB P ABC-type spermidine putrescine transport system, permease component I
JIIJFFAK_01752 3e-134 potC P ABC-type spermidine putrescine transport system, permease component II
JIIJFFAK_01753 2.3e-206 potD P spermidine putrescine ABC transporter
JIIJFFAK_01754 1.3e-19 XK27_08050 O HflC and HflK could regulate a protease
JIIJFFAK_01755 1.7e-47 XK27_08050 O stress-induced mitochondrial fusion
JIIJFFAK_01756 8.1e-72 gloA 4.4.1.5 E Lactoylglutathione lyase
JIIJFFAK_01757 2.6e-95 GK ROK family
JIIJFFAK_01758 1.3e-209 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
JIIJFFAK_01759 3.9e-104 wecD M Acetyltransferase GNAT family
JIIJFFAK_01760 7e-220 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JIIJFFAK_01761 1.5e-52 ogt 2.1.1.63, 3.2.2.20 L methylated-DNA-[protein]-cysteine S-methyltransferase activity
JIIJFFAK_01762 5.4e-59 arsC 1.20.4.1 P Belongs to the ArsC family
JIIJFFAK_01764 2.2e-58 lrgA S Effector of murein hydrolase LrgA
JIIJFFAK_01765 2.2e-117 lrgB M effector of murein hydrolase
JIIJFFAK_01766 2.6e-109 3.1.3.18 S IA, variant 1
JIIJFFAK_01767 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JIIJFFAK_01768 2.8e-302 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
JIIJFFAK_01769 7.4e-115 serB 3.1.3.3 E phosphoserine phosphatase
JIIJFFAK_01770 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
JIIJFFAK_01771 1.5e-163 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JIIJFFAK_01772 2.6e-55 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JIIJFFAK_01773 1.6e-112 csn2 S CRISPR-associated protein (Cas_Csn2)
JIIJFFAK_01775 1.1e-153 EG Permeases of the drug metabolite transporter (DMT) superfamily
JIIJFFAK_01776 4e-50 ycaO O OsmC-like protein
JIIJFFAK_01777 5.5e-65 paaI Q protein possibly involved in aromatic compounds catabolism
JIIJFFAK_01780 1.6e-134 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
JIIJFFAK_01782 1.4e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
JIIJFFAK_01783 1.1e-16 XK27_00735
JIIJFFAK_01784 6.7e-136 glnQ 3.6.3.21 E abc transporter atp-binding protein
JIIJFFAK_01785 0.0 glnP P ABC-type amino acid transport signal transduction systems periplasmic component domain
JIIJFFAK_01786 2.4e-33 S CAAX amino terminal protease family protein
JIIJFFAK_01787 5.5e-56 V CAAX protease self-immunity
JIIJFFAK_01788 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
JIIJFFAK_01789 2.9e-84 mutT 3.6.1.55 F Nudix family
JIIJFFAK_01790 2.8e-143 ET Belongs to the bacterial solute-binding protein 3 family
JIIJFFAK_01791 7.2e-136 ET ABC transporter
JIIJFFAK_01792 3.4e-200 arcT 2.6.1.1 E Aminotransferase
JIIJFFAK_01793 2.3e-134 gltS ET Belongs to the bacterial solute-binding protein 3 family
JIIJFFAK_01794 1.2e-19 rpsU J Belongs to the bacterial ribosomal protein bS21 family
JIIJFFAK_01795 1.1e-46 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
JIIJFFAK_01796 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
JIIJFFAK_01797 8e-202 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
JIIJFFAK_01798 3.4e-55 yitW K metal-sulfur cluster biosynthetic enzyme
JIIJFFAK_01799 5.4e-251 M Psort location CytoplasmicMembrane, score
JIIJFFAK_01800 1.6e-171 yfdH GT2 M COG0463, glycosyltransferases involved in cell wall biogenesis
JIIJFFAK_01801 1.2e-231
JIIJFFAK_01802 1.2e-160 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
JIIJFFAK_01803 7.6e-126 ycbB S Glycosyl transferase family 2
JIIJFFAK_01804 5.3e-48 XK27_09090 S Uncharacterized conserved protein (DUF2304)
JIIJFFAK_01805 2.6e-220 amrA S polysaccharide biosynthetic process
JIIJFFAK_01806 5.1e-195 tagF 2.7.8.12 M Glycosyl transferase, family 2
JIIJFFAK_01807 1.3e-226 rgpA GT4 M Domain of unknown function (DUF1972)
JIIJFFAK_01808 2.2e-179 rgpB GT2 M Glycosyltransferase, group 2 family protein
JIIJFFAK_01809 1.1e-142 rgpC GM Transport permease protein
JIIJFFAK_01810 8.7e-226 rgpD 3.6.3.38 P Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
JIIJFFAK_01811 8.2e-196 rgpEc GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
JIIJFFAK_01812 0.0 rgpF M Rhamnan synthesis protein F
JIIJFFAK_01813 6.2e-120 radC E Belongs to the UPF0758 family
JIIJFFAK_01814 1.6e-131 puuD T peptidase C26
JIIJFFAK_01815 3.6e-117 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
JIIJFFAK_01816 9e-59 XK27_04120 S Putative amino acid metabolism
JIIJFFAK_01817 3.2e-206 iscS 2.8.1.7 E Cysteine desulfurase
JIIJFFAK_01818 2.1e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JIIJFFAK_01819 5.8e-103 yjbK S Adenylate cyclase
JIIJFFAK_01820 1.5e-121 yjbM 2.7.6.5 S Gtp pyrophosphokinase
JIIJFFAK_01821 1.5e-152 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JIIJFFAK_01822 9.8e-174 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
JIIJFFAK_01823 1.4e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
JIIJFFAK_01824 3.7e-38 L transposase activity
JIIJFFAK_01825 1.4e-38 L transposase activity
JIIJFFAK_01826 9.3e-29 L transposition
JIIJFFAK_01827 4e-110 L PFAM Integrase catalytic region
JIIJFFAK_01828 6.7e-218 oxlT P COG0477 Permeases of the major facilitator superfamily
JIIJFFAK_01829 2e-21 tatD L hydrolase, TatD family'
JIIJFFAK_01830 5.5e-23 oppF P Belongs to the ABC transporter superfamily
JIIJFFAK_01831 1.2e-24 oppF P Belongs to the ABC transporter superfamily
JIIJFFAK_01832 4.1e-158 L COG2801 Transposase and inactivated derivatives
JIIJFFAK_01833 8.1e-45 L Transposase
JIIJFFAK_01834 0.0 amiA E ABC transporter, substrate-binding protein, family 5
JIIJFFAK_01835 1.1e-270 amiC P ABC transporter (Permease
JIIJFFAK_01836 2.4e-167 amiD P ABC transporter (Permease
JIIJFFAK_01837 2.2e-204 oppD P Belongs to the ABC transporter superfamily
JIIJFFAK_01838 4.3e-172 oppF P Belongs to the ABC transporter superfamily
JIIJFFAK_01839 9e-131 V ATPase activity
JIIJFFAK_01840 9.8e-121 skfE V abc transporter atp-binding protein
JIIJFFAK_01841 8.6e-63 yvoA_1 K Transcriptional
JIIJFFAK_01842 5.3e-147 supH S overlaps another CDS with the same product name
JIIJFFAK_01843 1.8e-150 XK27_02985 S overlaps another CDS with the same product name
JIIJFFAK_01844 9.7e-213 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
JIIJFFAK_01845 2.6e-112 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
JIIJFFAK_01846 2.7e-46 rpoZ 2.7.7.6 K DNA-directed 5'-3' RNA polymerase activity
JIIJFFAK_01847 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JIIJFFAK_01848 1e-173 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JIIJFFAK_01849 1.7e-246 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JIIJFFAK_01850 9e-133 stp 3.1.3.16 T phosphatase
JIIJFFAK_01851 1.7e-305 prkC 2.7.11.1 KLT serine threonine protein kinase
JIIJFFAK_01852 9.1e-119 yvqF KT membrane
JIIJFFAK_01853 1.9e-173 vraS 2.7.13.3 T Histidine kinase
JIIJFFAK_01854 8.2e-114 vraR K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
JIIJFFAK_01857 5.8e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JIIJFFAK_01858 1.9e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
JIIJFFAK_01859 8.6e-187 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
JIIJFFAK_01860 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
JIIJFFAK_01861 1.7e-120 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
JIIJFFAK_01862 1.8e-33 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
JIIJFFAK_01863 7e-150 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
JIIJFFAK_01864 6.4e-62 L Transposase
JIIJFFAK_01865 0.0 gshF 6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
JIIJFFAK_01866 4.3e-40 V abc transporter atp-binding protein
JIIJFFAK_01867 2.5e-101 V abc transporter atp-binding protein
JIIJFFAK_01868 5.1e-17 rtxA M M26 IgA1-specific Metallo-endopeptidase C-terminal region
JIIJFFAK_01869 3.5e-228 zmpB M M26 IgA1-specific Metallo-endopeptidase C-terminal region
JIIJFFAK_01870 1.2e-25 L transposition
JIIJFFAK_01871 2.7e-08 L Integrase core domain protein
JIIJFFAK_01872 2.3e-184 galR K Transcriptional regulator
JIIJFFAK_01873 3.7e-221 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JIIJFFAK_01874 1.3e-287 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
JIIJFFAK_01875 3.6e-193 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
JIIJFFAK_01876 2.4e-200 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
JIIJFFAK_01877 0.0 lacS G transporter
JIIJFFAK_01878 0.0 lacL 3.2.1.23 G -beta-galactosidase
JIIJFFAK_01879 1.3e-229 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
JIIJFFAK_01880 0.0 sbcC L ATPase involved in DNA repair
JIIJFFAK_01881 1.4e-84
JIIJFFAK_01883 1.8e-87 L transposase activity
JIIJFFAK_01884 1.4e-150 L Integrase core domain protein
JIIJFFAK_01885 6.5e-159 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
JIIJFFAK_01887 5.5e-258 I radical SAM domain protein
JIIJFFAK_01888 1.2e-176 EGP Major Facilitator Superfamily
JIIJFFAK_01889 3.9e-110 C Fe-S oxidoreductases
JIIJFFAK_01891 1.1e-151 V MatE
JIIJFFAK_01892 1.1e-116 devA 3.6.3.25 V abc transporter atp-binding protein
JIIJFFAK_01893 5e-161 hrtB V MacB-like periplasmic core domain
JIIJFFAK_01895 0.0 M family 8
JIIJFFAK_01896 2.7e-09
JIIJFFAK_01897 5.6e-08
JIIJFFAK_01898 5.8e-109 MA20_06410 E LysE type translocator
JIIJFFAK_01899 2.7e-12 IQ PFAM AMP-dependent synthetase and ligase
JIIJFFAK_01900 5.3e-12 IQ PFAM AMP-dependent synthetase and ligase
JIIJFFAK_01901 1e-137
JIIJFFAK_01902 1.8e-270 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JIIJFFAK_01903 4.5e-61
JIIJFFAK_01905 9.3e-72 S Signal peptide protein, YSIRK family
JIIJFFAK_01906 1.4e-54 K response regulator
JIIJFFAK_01907 1.1e-37 BP1961 P nitric oxide dioxygenase activity
JIIJFFAK_01909 3.6e-282 XK27_07020 S Belongs to the UPF0371 family
JIIJFFAK_01910 2.7e-182 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
JIIJFFAK_01911 1.5e-160 yvgN C reductase
JIIJFFAK_01912 6.6e-102 yoaK S Protein of unknown function (DUF1275)
JIIJFFAK_01913 1.4e-110 drgA C Nitroreductase
JIIJFFAK_01914 1.9e-231 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JIIJFFAK_01915 8.6e-159 E Alpha/beta hydrolase of unknown function (DUF915)
JIIJFFAK_01916 1.1e-75 ywnA K Transcriptional regulator
JIIJFFAK_01917 5e-96 1.13.11.2 S glyoxalase
JIIJFFAK_01918 3.5e-16 1.13.11.2 S glyoxalase
JIIJFFAK_01919 5.1e-110 XK27_02070 S nitroreductase
JIIJFFAK_01920 4e-227 yfnA E amino acid
JIIJFFAK_01922 4.8e-25 csbD K CsbD-like
JIIJFFAK_01923 8.2e-57 manA 5.3.1.8 G mannose-6-phosphate isomerase
JIIJFFAK_01924 9.4e-65 manA 5.3.1.8 G mannose-6-phosphate isomerase
JIIJFFAK_01925 1.7e-235 brnQ E Component of the transport system for branched-chain amino acids
JIIJFFAK_01926 2.2e-187 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JIIJFFAK_01927 4.5e-247 norM V Multidrug efflux pump
JIIJFFAK_01928 2.1e-192 pbuX F xanthine permease
JIIJFFAK_01930 3.2e-78 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
JIIJFFAK_01931 4.6e-123 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
JIIJFFAK_01932 6.2e-166 T Histidine kinase
JIIJFFAK_01933 1.9e-133 macB2 V ABC transporter, ATP-binding protein
JIIJFFAK_01934 0.0 V ABC transporter (permease)
JIIJFFAK_01935 6.1e-93 XK27_05000 S metal cluster binding
JIIJFFAK_01936 2.6e-30 liaI KT membrane
JIIJFFAK_01937 1.4e-15 liaI KT membrane
JIIJFFAK_01938 6.1e-26 XK27_09825 V 'abc transporter, ATP-binding protein
JIIJFFAK_01939 3.7e-122 S An automated process has identified a potential problem with this gene model
JIIJFFAK_01941 4.6e-42 3.6.1.55 F NUDIX domain
JIIJFFAK_01942 4.6e-152 mutR K Transcriptional activator, Rgg GadR MutR family
JIIJFFAK_01943 2.2e-287 2.7.7.73, 2.7.7.80 E metalloendopeptidase activity
JIIJFFAK_01944 9.3e-144 2.7.7.73, 2.7.7.80 E metalloendopeptidase activity
JIIJFFAK_01945 6.6e-213 EGP Major facilitator Superfamily
JIIJFFAK_01949 8.7e-159 XK27_09825 V abc transporter atp-binding protein
JIIJFFAK_01950 1.4e-133 yvfS V ABC-2 type transporter
JIIJFFAK_01951 1.5e-192 desK 2.7.13.3 T Histidine kinase
JIIJFFAK_01952 4.4e-101 desR K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
JIIJFFAK_01953 1.6e-59 sdaAB 4.3.1.17 E L-serine dehydratase
JIIJFFAK_01954 1.3e-309 hutU 4.2.1.49 E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
JIIJFFAK_01955 1.2e-48 S Protein of unknown function (DUF917)
JIIJFFAK_01956 1.4e-133 S Protein of unknown function (DUF917)
JIIJFFAK_01957 1.2e-280 hutH 4.3.1.3 E Histidine ammonia-lyase
JIIJFFAK_01958 3e-111 proWZ P ABC transporter (Permease
JIIJFFAK_01959 7.4e-169 proX M ABC transporter, substrate-binding protein, QAT family
JIIJFFAK_01960 1.5e-138 proV E abc transporter atp-binding protein
JIIJFFAK_01961 9.8e-88 proW P Binding-protein-dependent transport system inner membrane component
JIIJFFAK_01962 1.2e-62 bioY S biotin transmembrane transporter activity
JIIJFFAK_01963 3.1e-127 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 E hydrolase
JIIJFFAK_01964 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
JIIJFFAK_01965 2.6e-277 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)