ORF_ID e_value Gene_name EC_number CAZy COGs Description
POMDABJN_00001 2.5e-157 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
POMDABJN_00002 2.3e-17 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
POMDABJN_00003 1e-232 cinA 3.5.1.42 S Belongs to the CinA family
POMDABJN_00004 6.4e-107 tag 3.2.2.20 L 3-methyladenine DNA glycosylase
POMDABJN_00005 7.8e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
POMDABJN_00006 4.8e-40 L Transposase
POMDABJN_00007 2.3e-47 L Transposase
POMDABJN_00008 1.2e-165 L integrase core domain
POMDABJN_00010 5.1e-53 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
POMDABJN_00011 1.1e-300 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
POMDABJN_00013 1.2e-61 KT phosphorelay signal transduction system
POMDABJN_00014 5.7e-19 S Protein of unknown function (DUF3021)
POMDABJN_00015 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
POMDABJN_00016 1e-57 ymcA 3.6.3.21 S Belongs to the UPF0342 family
POMDABJN_00017 8.2e-70 argR K Regulates arginine biosynthesis genes
POMDABJN_00019 0.0 argS 6.1.1.19 J Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
POMDABJN_00020 3.2e-83 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
POMDABJN_00021 1.5e-147 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
POMDABJN_00022 1.1e-22 1.1.1.169 H Ketopantoate reductase
POMDABJN_00023 2.9e-105 1.1.1.169 H Ketopantoate reductase
POMDABJN_00024 6.8e-133 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
POMDABJN_00025 7.3e-59 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
POMDABJN_00026 1.3e-45 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
POMDABJN_00027 3.4e-241 purD 6.3.4.13 F Belongs to the GARS family
POMDABJN_00028 2.3e-161 S CHAP domain
POMDABJN_00029 1.4e-33 L Integrase core domain protein
POMDABJN_00030 1.4e-48 L transposition
POMDABJN_00031 1.2e-74 L transposase activity
POMDABJN_00032 7.8e-202 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
POMDABJN_00033 1.6e-70 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
POMDABJN_00034 1.4e-101 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
POMDABJN_00035 1.8e-184 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
POMDABJN_00036 3.1e-103 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
POMDABJN_00037 1.7e-124 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
POMDABJN_00038 4e-167 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
POMDABJN_00039 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
POMDABJN_00040 1.4e-127 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
POMDABJN_00041 4.2e-34 acpP1 IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
POMDABJN_00042 3.3e-178 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
POMDABJN_00043 2.5e-17 recO L Involved in DNA repair and RecF pathway recombination
POMDABJN_00044 2.4e-107 recO L Involved in DNA repair and RecF pathway recombination
POMDABJN_00045 8.1e-199 araT 2.6.1.1 E Aminotransferase
POMDABJN_00046 5.2e-10 araT 2.6.1.1 E Aminotransferase
POMDABJN_00047 1.1e-133 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
POMDABJN_00048 4.5e-15 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
POMDABJN_00049 1.7e-90 usp 3.5.1.28 CBM50 S CHAP domain
POMDABJN_00050 6.3e-88 mreD M Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
POMDABJN_00051 3e-117 mreC M Involved in formation and maintenance of cell shape
POMDABJN_00057 5.3e-11
POMDABJN_00070 2.6e-12
POMDABJN_00071 1.3e-257 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
POMDABJN_00072 6.3e-202 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
POMDABJN_00073 1.1e-29 yyzM S Protein conserved in bacteria
POMDABJN_00074 1.1e-203 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
POMDABJN_00075 1.4e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
POMDABJN_00076 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
POMDABJN_00077 1.7e-39 yabO J Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
POMDABJN_00078 2.7e-61 divIC D Septum formation initiator
POMDABJN_00080 1.3e-240 XK27_09285 3.5.2.6 V Beta-lactamase enzyme family
POMDABJN_00081 5e-240 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
POMDABJN_00082 3.4e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
POMDABJN_00083 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
POMDABJN_00084 1.3e-137 L Transposase
POMDABJN_00085 1.1e-92 L Transposase
POMDABJN_00086 1.6e-55 L transposition
POMDABJN_00087 1.9e-86 L Integrase core domain protein
POMDABJN_00106 5.5e-139 mreC M Involved in formation and maintenance of cell shape
POMDABJN_00107 3.5e-83 mreD M Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
POMDABJN_00108 1.7e-90 usp 3.5.1.28 CBM50 S CHAP domain
POMDABJN_00109 1.2e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
POMDABJN_00110 2.9e-218 araT 2.6.1.1 E Aminotransferase
POMDABJN_00111 2.6e-143 recO L Involved in DNA repair and RecF pathway recombination
POMDABJN_00112 2.1e-147 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
POMDABJN_00113 4.2e-34 acpP1 IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
POMDABJN_00114 2e-129 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
POMDABJN_00115 5.7e-187 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
POMDABJN_00116 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
POMDABJN_00117 1.3e-276 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
POMDABJN_00118 1.8e-184 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
POMDABJN_00119 9.3e-56 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
POMDABJN_00120 1.1e-246 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
POMDABJN_00121 4.8e-76 L transposase activity
POMDABJN_00122 1.4e-48 L transposition
POMDABJN_00123 1.4e-33 L Integrase core domain protein
POMDABJN_00124 6.4e-159 S CHAP domain
POMDABJN_00125 4.3e-09 purD 6.3.4.13 F Belongs to the GARS family
POMDABJN_00126 1.5e-81 purD 6.3.4.13 F Belongs to the GARS family
POMDABJN_00127 6.9e-89 purD 6.3.4.13 F Belongs to the GARS family
POMDABJN_00128 4.9e-76 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
POMDABJN_00129 2.2e-204 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
POMDABJN_00130 9.2e-141 1.1.1.169 H Ketopantoate reductase
POMDABJN_00131 8.7e-248 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
POMDABJN_00132 0.0 argS 6.1.1.19 J Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
POMDABJN_00133 2.6e-09 L Transposase
POMDABJN_00134 8.2e-70 argR K Regulates arginine biosynthesis genes
POMDABJN_00135 5.6e-56 ymcA 3.6.3.21 S Belongs to the UPF0342 family
POMDABJN_00136 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
POMDABJN_00137 5.7e-19 S Protein of unknown function (DUF3021)
POMDABJN_00138 1.2e-61 KT phosphorelay signal transduction system
POMDABJN_00140 2.5e-36 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
POMDABJN_00141 1.7e-207 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
POMDABJN_00143 1.2e-165 L integrase core domain
POMDABJN_00144 4.2e-94 L Transposase
POMDABJN_00145 7.8e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
POMDABJN_00146 4.1e-106 tag 3.2.2.20 L 3-methyladenine DNA glycosylase
POMDABJN_00147 1e-232 cinA 3.5.1.42 S Belongs to the CinA family
POMDABJN_00148 2e-195 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
POMDABJN_00149 1.1e-65 spxA_2 1.20.4.1 P Belongs to the ArsC family
POMDABJN_00155 2.6e-10
POMDABJN_00158 1.9e-07
POMDABJN_00163 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
POMDABJN_00164 5.7e-222 pepS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
POMDABJN_00165 5.5e-36 XK27_02060 S Transglycosylase associated protein
POMDABJN_00166 1.8e-26 badR K DNA-binding transcription factor activity
POMDABJN_00167 1.7e-96 S reductase
POMDABJN_00168 1e-87 L Integrase core domain protein
POMDABJN_00169 3.2e-40 L transposition
POMDABJN_00170 7.3e-22 yocD 3.4.17.13 V carboxypeptidase activity
POMDABJN_00171 1.9e-86 yocD 3.4.17.13 V proteins, homologs of microcin C7 resistance protein MccF
POMDABJN_00174 6.3e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
POMDABJN_00175 1.7e-182 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
POMDABJN_00176 1.1e-83 S Putative small multi-drug export protein
POMDABJN_00177 2.4e-75 ctsR K Belongs to the CtsR family
POMDABJN_00178 0.0 clpC O Belongs to the ClpA ClpB family
POMDABJN_00179 8.1e-151 dacA 3.4.16.4 M Belongs to the peptidase S11 family
POMDABJN_00180 8.4e-53 dacA 3.4.16.4 M Belongs to the peptidase S11 family
POMDABJN_00181 1.2e-230 dacA 3.4.16.4 M Belongs to the peptidase S11 family
POMDABJN_00182 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
POMDABJN_00183 4.5e-143 S SseB protein N-terminal domain
POMDABJN_00184 1.1e-112 cysE 2.3.1.30 E serine acetyltransferase
POMDABJN_00185 1.7e-259 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
POMDABJN_00186 4.2e-68 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
POMDABJN_00189 5.7e-135 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
POMDABJN_00190 3.5e-91 yacP S RNA-binding protein containing a PIN domain
POMDABJN_00191 3.4e-155 degV S DegV family
POMDABJN_00193 2.3e-31 K helix-turn-helix
POMDABJN_00194 1.6e-94 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
POMDABJN_00195 3.6e-57 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
POMDABJN_00196 2e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
POMDABJN_00197 9.5e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
POMDABJN_00198 1.5e-35 K sequence-specific DNA binding
POMDABJN_00200 0.0 S Lantibiotic dehydratase, C terminus
POMDABJN_00201 2.4e-231 spaC2 V Lanthionine synthetase C family protein
POMDABJN_00202 2.5e-183 EGP Major facilitator Superfamily
POMDABJN_00203 5.9e-24 3.6.4.12
POMDABJN_00204 6.5e-90 3.6.4.12 K Divergent AAA domain protein
POMDABJN_00205 9.3e-184 L Phage integrase family
POMDABJN_00206 1.7e-22
POMDABJN_00207 1.3e-154
POMDABJN_00209 1.3e-134 D ftsk spoiiie
POMDABJN_00213 9.7e-227 sthIM 2.1.1.72 L DNA methylase
POMDABJN_00214 0.0 res_1 3.1.21.5 S Type III restriction
POMDABJN_00216 2.2e-224 int L Belongs to the 'phage' integrase family
POMDABJN_00217 1.8e-38 S Helix-turn-helix domain
POMDABJN_00218 4.9e-173
POMDABJN_00220 3.4e-75 isp2 S pathogenesis
POMDABJN_00221 5.7e-91 tnp L Transposase
POMDABJN_00222 3.3e-225 capA M Bacterial capsule synthesis protein
POMDABJN_00223 3.6e-39 gcvR T UPF0237 protein
POMDABJN_00224 1.9e-242 XK27_08635 S UPF0210 protein
POMDABJN_00225 2.2e-38 ais G alpha-ribazole phosphatase activity
POMDABJN_00226 1.6e-143 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
POMDABJN_00227 1.3e-102 acmA 3.2.1.17 NU amidase activity
POMDABJN_00228 5.3e-198 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
POMDABJN_00229 1.3e-71 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
POMDABJN_00230 7.5e-298 dnaK O Heat shock 70 kDa protein
POMDABJN_00231 9.1e-185 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
POMDABJN_00232 7.7e-140 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
POMDABJN_00233 6.2e-137 thiD 2.7.1.35, 2.7.1.49, 2.7.4.7 H phosphomethylpyrimidine kinase
POMDABJN_00234 1.7e-60 hmpT S membrane
POMDABJN_00235 5e-41
POMDABJN_00248 0.0 amiA E ABC transporter, substrate-binding protein, family 5
POMDABJN_00249 2.5e-169 L Transposase
POMDABJN_00250 9.9e-19 S Domain of unknown function (DUF4649)
POMDABJN_00251 1.8e-56 amd 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
POMDABJN_00252 3.2e-233 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
POMDABJN_00253 1e-84
POMDABJN_00254 1.6e-77 sigH K DNA-templated transcription, initiation
POMDABJN_00255 9.3e-150 ykuT M mechanosensitive ion channel
POMDABJN_00256 6.4e-219 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
POMDABJN_00257 4.8e-73 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
POMDABJN_00258 7.6e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
POMDABJN_00259 1.1e-83 XK27_03960 S Protein of unknown function (DUF3013)
POMDABJN_00260 3.7e-81 mutT3 3.6.1.13, 3.6.1.55 L NUDIX domain
POMDABJN_00261 2e-177 prmA J Ribosomal protein L11 methyltransferase
POMDABJN_00262 4.4e-135 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
POMDABJN_00263 1.4e-42 F nucleotide catabolic process
POMDABJN_00264 5.4e-139 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
POMDABJN_00265 6.3e-186 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
POMDABJN_00266 3.8e-81 nrdI F Belongs to the NrdI family
POMDABJN_00267 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
POMDABJN_00268 3.3e-74 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
POMDABJN_00269 1.4e-09 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
POMDABJN_00270 2e-27 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
POMDABJN_00271 2.1e-58 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
POMDABJN_00272 3.9e-46 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
POMDABJN_00273 1.7e-237 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
POMDABJN_00274 3.3e-112 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
POMDABJN_00275 5.3e-113 fnr5 K Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
POMDABJN_00276 6.5e-202 yhjX P Major Facilitator
POMDABJN_00277 9.2e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
POMDABJN_00278 5e-94 V VanZ like family
POMDABJN_00279 1e-123 glnQ E abc transporter atp-binding protein
POMDABJN_00280 5.8e-275 glnP P ABC transporter
POMDABJN_00281 3.1e-153 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
POMDABJN_00282 5.2e-136 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
POMDABJN_00283 5.5e-185 tagO 2.7.8.33, 2.7.8.35 M transferase
POMDABJN_00284 9.5e-144 sufC O ABC-type transport system involved in Fe-S cluster assembly, ATPase component
POMDABJN_00285 6.3e-235 sufD O assembly protein SufD
POMDABJN_00286 7.7e-238 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
POMDABJN_00287 2.5e-74 nifU C SUF system FeS assembly protein, NifU family
POMDABJN_00288 2.2e-273 sufB O assembly protein SufB
POMDABJN_00289 7e-10 oppA E ABC transporter substrate-binding protein
POMDABJN_00290 2e-138 oppA E ABC transporter substrate-binding protein
POMDABJN_00291 4.2e-27 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
POMDABJN_00292 6.6e-11 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
POMDABJN_00293 1.7e-33 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
POMDABJN_00294 1.4e-38 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
POMDABJN_00295 3e-27 oppD P Belongs to the ABC transporter superfamily
POMDABJN_00296 2.5e-32 oppD P Belongs to the ABC transporter superfamily
POMDABJN_00297 1.2e-62 oppD P Belongs to the ABC transporter superfamily
POMDABJN_00298 2.7e-41 oppD P Belongs to the ABC transporter superfamily
POMDABJN_00299 7.5e-62 oppF P Belongs to the ABC transporter superfamily
POMDABJN_00300 3.4e-62 oppF P Belongs to the ABC transporter superfamily
POMDABJN_00301 6.4e-23
POMDABJN_00302 2.1e-157 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
POMDABJN_00303 7.4e-183 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
POMDABJN_00304 1.9e-223 EGP Major facilitator Superfamily
POMDABJN_00305 9.1e-72 adcR K transcriptional
POMDABJN_00306 1.1e-135 adcC P ABC transporter, ATP-binding protein
POMDABJN_00307 9.3e-131 adcB P ABC transporter (Permease
POMDABJN_00308 4.8e-163 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
POMDABJN_00309 5.6e-65 ptsG 2.7.1.199, 2.7.1.208 G pts system
POMDABJN_00310 2.1e-150 ptsG 2.7.1.199, 2.7.1.208, 2.7.1.211 G pts system
POMDABJN_00311 4.8e-106 ptsG 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
POMDABJN_00312 6.6e-150 rgfB 3.1.3.90 L endonuclease exonuclease phosphatase family protein
POMDABJN_00313 1.1e-256 pgi 5.3.1.9 G Belongs to the GPI family
POMDABJN_00314 1.9e-127 yeeN K transcriptional regulatory protein
POMDABJN_00315 9.8e-50 yajC U protein transport
POMDABJN_00316 1.1e-141 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
POMDABJN_00317 2.2e-145 cdsA 2.7.7.41 S Belongs to the CDS family
POMDABJN_00318 1.4e-231 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
POMDABJN_00319 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
POMDABJN_00320 0.0 WQ51_06230 S ABC transporter substrate binding protein
POMDABJN_00321 5.2e-142 cmpC S abc transporter atp-binding protein
POMDABJN_00322 1.3e-42 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
POMDABJN_00323 4.1e-287 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
POMDABJN_00324 4.4e-37 L Transposase
POMDABJN_00325 6.4e-18 L transposase activity
POMDABJN_00326 1.5e-30 L transposition
POMDABJN_00329 4.7e-43
POMDABJN_00330 6.8e-56 S TM2 domain
POMDABJN_00331 1.2e-165 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
POMDABJN_00332 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
POMDABJN_00333 3.3e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
POMDABJN_00334 5.7e-25 secE U Belongs to the SecE SEC61-gamma family
POMDABJN_00335 8.4e-96 nusG K Participates in transcription elongation, termination and antitermination
POMDABJN_00336 4.6e-85 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I phosphatidate phosphatase activity
POMDABJN_00337 6e-55 cof Q phosphatase activity
POMDABJN_00338 1.1e-34 cof Q phosphatase activity
POMDABJN_00339 4.5e-135 glcR K transcriptional regulator (DeoR family)
POMDABJN_00340 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
POMDABJN_00342 3.8e-40 K transcriptional
POMDABJN_00344 2.6e-76 S thiolester hydrolase activity
POMDABJN_00345 1e-139 S COG1073 Hydrolases of the alpha beta superfamily
POMDABJN_00346 1.3e-279 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
POMDABJN_00347 2.1e-151 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
POMDABJN_00348 1.9e-77 yhaI L Membrane
POMDABJN_00349 5.1e-259 pepC 3.4.22.40 E aminopeptidase
POMDABJN_00350 8.9e-104 L Transposase
POMDABJN_00351 5.3e-136 L Transposase
POMDABJN_00352 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
POMDABJN_00353 2.5e-109 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
POMDABJN_00354 8.9e-95 ypsA S Belongs to the UPF0398 family
POMDABJN_00355 5.6e-50 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
POMDABJN_00356 1.5e-222 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
POMDABJN_00357 2.5e-296 mapZ D Early cell division protein that marks the future cell division site and supports proper FtsZ ring positioning
POMDABJN_00358 0.0 snf 2.7.11.1 L Superfamily II DNA RNA helicases, SNF2 family'
POMDABJN_00359 2.5e-23
POMDABJN_00360 4.4e-255 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
POMDABJN_00361 2.1e-82 XK27_09675 K -acetyltransferase
POMDABJN_00362 0.0 mltG ADL Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
POMDABJN_00363 1.6e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
POMDABJN_00364 5.2e-59 L Integrase core domain protein
POMDABJN_00365 8.5e-165 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
POMDABJN_00366 7e-46 acyP 3.6.1.7 C Belongs to the acylphosphatase family
POMDABJN_00367 6.4e-131 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
POMDABJN_00368 6.1e-93 XK27_09705 6.1.1.14 S HD superfamily hydrolase
POMDABJN_00369 8.8e-98 ybhL S Belongs to the BI1 family
POMDABJN_00372 9.6e-244 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
POMDABJN_00373 3.7e-91 K transcriptional regulator
POMDABJN_00374 7.6e-36 yneF S UPF0154 protein
POMDABJN_00375 3.8e-148 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
POMDABJN_00376 7.1e-186 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
POMDABJN_00377 3.5e-99 XK27_09740 S Phosphoesterase
POMDABJN_00378 7.8e-85 ykuL S CBS domain
POMDABJN_00379 4.5e-135 xerD L tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site
POMDABJN_00380 3.8e-120 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
POMDABJN_00381 3e-99 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
POMDABJN_00382 6.1e-140 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
POMDABJN_00383 1.2e-39 yidD S Could be involved in insertion of integral membrane proteins into the membrane
POMDABJN_00384 1.2e-258 trkH P Cation transport protein
POMDABJN_00385 1.3e-246 trkA P Potassium transporter peripheral membrane component
POMDABJN_00386 7.9e-96 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
POMDABJN_00387 3.2e-90 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
POMDABJN_00388 4.8e-114 bcrC 3.6.1.27 I Membrane-associated phospholipid phosphatase
POMDABJN_00389 5.6e-161 K sequence-specific DNA binding
POMDABJN_00390 1.2e-32 V protein secretion by the type I secretion system
POMDABJN_00391 7.4e-36 V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
POMDABJN_00392 1.2e-54 V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
POMDABJN_00393 1.8e-34 V protein secretion by the type I secretion system
POMDABJN_00394 2.3e-129 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
POMDABJN_00395 1.8e-50 yhaI L Membrane
POMDABJN_00396 2.1e-105 S Domain of unknown function (DUF4173)
POMDABJN_00397 6.8e-95 ureI S AmiS/UreI family transporter
POMDABJN_00398 7.6e-46 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
POMDABJN_00399 7.8e-54 ureB 3.5.1.5 E Belongs to the urease beta subunit family
POMDABJN_00400 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
POMDABJN_00401 6.6e-78 ureE O enzyme active site formation
POMDABJN_00402 5.3e-130 ureF O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
POMDABJN_00403 9.5e-112 ureG KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
POMDABJN_00404 3.4e-160 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
POMDABJN_00405 4.3e-175 cbiM P PDGLE domain
POMDABJN_00406 1.1e-136 P cobalt transport protein
POMDABJN_00407 1.6e-131 cbiO P ABC transporter
POMDABJN_00408 5.3e-153 ET amino acid transport
POMDABJN_00409 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
POMDABJN_00410 0.0 3.3.1.1, 3.6.1.55, 3.6.1.67 F NUDIX domain
POMDABJN_00411 3.8e-205 EGP Transmembrane secretion effector
POMDABJN_00412 1.8e-153 ET amino acid transport
POMDABJN_00413 7.1e-164 metQ M Belongs to the NlpA lipoprotein family
POMDABJN_00414 4.9e-87 dapE 3.5.1.18 E COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases
POMDABJN_00415 1.2e-61 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase activity
POMDABJN_00416 1.4e-62 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase activity
POMDABJN_00417 1.2e-189 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
POMDABJN_00418 5.2e-98 metI P ABC transporter (Permease
POMDABJN_00419 3.9e-210 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
POMDABJN_00420 5.5e-158 salL 2.5.1.63, 2.5.1.94 S S-adenosyl-l-methionine hydroxide adenosyltransferase
POMDABJN_00421 8e-94 S UPF0397 protein
POMDABJN_00422 0.0 ykoD P abc transporter atp-binding protein
POMDABJN_00423 1.2e-146 cbiQ P cobalt transport
POMDABJN_00424 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
POMDABJN_00425 1.4e-11 ulaG S L-ascorbate 6-phosphate lactonase
POMDABJN_00426 1.4e-121 ktrA P COG0569 K transport systems, NAD-binding component
POMDABJN_00427 1.4e-243 P COG0168 Trk-type K transport systems, membrane components
POMDABJN_00428 1.1e-130 rsmG 2.1.1.170 J Ribosomal RNA small subunit methyltransferase G
POMDABJN_00429 2.1e-91 yceD K metal-binding, possibly nucleic acid-binding protein
POMDABJN_00430 1.8e-122 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
POMDABJN_00431 3.3e-275 T PhoQ Sensor
POMDABJN_00432 2.8e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
POMDABJN_00433 5e-218 dnaB L Replication initiation and membrane attachment
POMDABJN_00434 4e-167 dnaI L Primosomal protein DnaI
POMDABJN_00435 1.3e-246 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
POMDABJN_00436 9e-88 yrdC 3.5.1.19 Q isochorismatase
POMDABJN_00437 3.4e-80 L PFAM Integrase catalytic region
POMDABJN_00438 1.7e-54 L transposition
POMDABJN_00439 5e-23 L Transposase
POMDABJN_00440 2.3e-32 L transposase activity
POMDABJN_00441 1.2e-42 L Transposase
POMDABJN_00442 6.9e-150 L Transposase
POMDABJN_00444 4.3e-41 L Protein of unknown function (DUF3991)
POMDABJN_00445 2.8e-160 L Transposase DDE domain
POMDABJN_00446 4.5e-17 lytN 3.5.1.104 M LysM domain
POMDABJN_00447 1.3e-125 tnp L DDE domain
POMDABJN_00448 2.1e-12 G gluconolactonase activity
POMDABJN_00449 0.0 M domain protein
POMDABJN_00450 1.8e-95 M domain protein
POMDABJN_00451 6.5e-106 M domain protein
POMDABJN_00452 1.4e-36 L Integrase core domain
POMDABJN_00453 2.6e-94 L Integrase core domain
POMDABJN_00454 1.3e-221 L Transposase
POMDABJN_00455 8e-230 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
POMDABJN_00456 4.2e-62 manO S protein conserved in bacteria
POMDABJN_00457 1.1e-169 manN G PTS system mannose fructose sorbose family IID component
POMDABJN_00458 5e-108 manM G pts system
POMDABJN_00459 1.1e-181 manL 2.7.1.191 G pts system
POMDABJN_00460 1.5e-140 XK27_00940 1.2.1.70, 3.5.1.9 S Metal-dependent hydrolase
POMDABJN_00461 1e-153 yitU 3.1.3.104 S hydrolases of the HAD superfamily
POMDABJN_00462 1.9e-248 pbuO S permease
POMDABJN_00463 1.4e-77 ydiB 2.7.1.221, 5.1.1.1 M ATPase or kinase
POMDABJN_00464 3.2e-92 XK27_05885 2.3.1.82 M Acetyltransferase GNAT Family
POMDABJN_00465 2.8e-219 brpA K Transcriptional
POMDABJN_00466 4.8e-79 rimP S Required for maturation of 30S ribosomal subunits
POMDABJN_00467 3.1e-212 nusA K Participates in both transcription termination and antitermination
POMDABJN_00468 1e-47 ylxR K Nucleic-acid-binding protein implicated in transcription termination
POMDABJN_00469 1.4e-41 ylxQ J ribosomal protein
POMDABJN_00470 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
POMDABJN_00471 1.7e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
POMDABJN_00472 2e-22 yvdD 3.2.2.10 S Belongs to the LOG family
POMDABJN_00473 1.5e-25 yvdD 3.2.2.10 S cytokinin biosynthetic process
POMDABJN_00474 3.6e-48 femA 2.3.2.10, 2.3.2.16, 2.3.2.17, 2.3.2.18 V protein involved in methicillin resistance
POMDABJN_00475 6e-157 femA 2.3.2.10, 2.3.2.16, 2.3.2.17, 2.3.2.18 V protein involved in methicillin resistance
POMDABJN_00476 4.9e-276 murE 6.3.2.13, 6.3.2.7 M to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
POMDABJN_00477 4.5e-283 ytgP S Membrane protein involved in the export of O-antigen and teichoic acid
POMDABJN_00478 3.3e-96 pacL 3.6.3.8, 3.6.3.9 P cation transport ATPase
POMDABJN_00479 4.7e-202 metB 2.5.1.48, 4.4.1.8 E cystathionine
POMDABJN_00480 1e-223 malY 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
POMDABJN_00482 4.4e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
POMDABJN_00483 2.9e-105 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
POMDABJN_00484 1.2e-74 ylbF S Belongs to the UPF0342 family
POMDABJN_00485 7.1e-46 ylbG S UPF0298 protein
POMDABJN_00486 1.3e-210 livJ E COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component
POMDABJN_00487 1.9e-145 livH E Belongs to the binding-protein-dependent transport system permease family
POMDABJN_00488 1.4e-138 livM E Belongs to the binding-protein-dependent transport system permease family
POMDABJN_00489 9.6e-138 livG E COG0411 ABC-type branched-chain amino acid transport systems, ATPase component
POMDABJN_00490 4.8e-123 livF E COG0410 ABC-type branched-chain amino acid transport systems, ATPase component
POMDABJN_00491 6.8e-69 acuB S IMP dehydrogenase activity
POMDABJN_00492 8.9e-41 acuB S IMP dehydrogenase activity
POMDABJN_00493 3.7e-168 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
POMDABJN_00494 1.1e-110 yvyE 3.4.13.9 S YigZ family
POMDABJN_00495 4.5e-252 comFA L Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
POMDABJN_00496 1.7e-122 comFC S Competence protein
POMDABJN_00497 2.1e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
POMDABJN_00505 3.5e-166 ppaC 3.6.1.1 C inorganic pyrophosphatase
POMDABJN_00506 3.2e-107 S Domain of unknown function (DUF1803)
POMDABJN_00507 1.3e-101 ygaC J Belongs to the UPF0374 family
POMDABJN_00508 1.2e-130 recX 2.4.1.337 GT4 S Regulatory protein RecX
POMDABJN_00509 6.7e-259 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
POMDABJN_00510 8e-193 asnA 6.3.1.1 E aspartate--ammonia ligase
POMDABJN_00511 2.4e-256 lysC 2.7.2.4 E Belongs to the aspartokinase family
POMDABJN_00512 1.6e-114 S Haloacid dehalogenase-like hydrolase
POMDABJN_00513 6.9e-139 phaB 5.3.3.14, 5.3.3.18 I Belongs to the enoyl-CoA hydratase isomerase family
POMDABJN_00514 4e-72 marR K Transcriptional regulator, MarR family
POMDABJN_00515 2.3e-173 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
POMDABJN_00516 3.3e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
POMDABJN_00517 1.2e-172 fabK 1.3.1.9 S 2-Nitropropane dioxygenase
POMDABJN_00518 2.5e-164 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
POMDABJN_00519 1.6e-126 IQ reductase
POMDABJN_00520 2.6e-233 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
POMDABJN_00521 7.7e-56 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
POMDABJN_00522 1.5e-71 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
POMDABJN_00523 1.7e-257 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
POMDABJN_00524 1.6e-160 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
POMDABJN_00525 1.1e-138 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
POMDABJN_00526 4.7e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
POMDABJN_00527 1.1e-65 tnp L Transposase
POMDABJN_00528 2.3e-214 gadB 4.1.1.15 E Belongs to the group II decarboxylase family
POMDABJN_00529 9.8e-176 gadC E Psort location CytoplasmicMembrane, score 10.00
POMDABJN_00530 4.7e-27 L Transposase and inactivated derivatives, TnpA family
POMDABJN_00531 1.1e-65 tnp L Transposase
POMDABJN_00533 2.7e-82 S Protein of unknown function (DUF3114)
POMDABJN_00534 1.1e-176 S Protein of unknown function (DUF3114)
POMDABJN_00535 1.7e-51 2.3.1.128 K Acetyltransferase GNAT Family
POMDABJN_00536 7.7e-198 V (ABC) transporter
POMDABJN_00537 1.4e-74 C Arylsulfatase regulator (Fe-S oxidoreductase)
POMDABJN_00538 6.4e-85 C Arylsulfatase regulator (Fe-S oxidoreductase)
POMDABJN_00539 1.1e-113 K sequence-specific DNA binding
POMDABJN_00540 8.4e-155 L COG2801 Transposase and inactivated derivatives
POMDABJN_00541 6.6e-38 L transposase activity
POMDABJN_00542 1.3e-205 rny D Endoribonuclease that initiates mRNA decay
POMDABJN_00543 8.9e-84 L Transposase
POMDABJN_00544 5.5e-122 fruR K transcriptional
POMDABJN_00545 3.8e-165 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
POMDABJN_00546 0.0 fruA 2.7.1.202 G phosphotransferase system
POMDABJN_00547 2.7e-260 gor 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
POMDABJN_00548 2.6e-241 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
POMDABJN_00550 6.1e-213 iscS2 2.8.1.7 E Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes
POMDABJN_00551 6.5e-229 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
POMDABJN_00552 4.9e-295 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
POMDABJN_00553 7.2e-258 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
POMDABJN_00554 6.4e-29 2.3.1.128 K acetyltransferase
POMDABJN_00555 4.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
POMDABJN_00556 1.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
POMDABJN_00557 7.7e-134 ydaF_2 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
POMDABJN_00558 2.6e-64 WQ51_03320 S cog cog4835
POMDABJN_00559 9.8e-91 XK27_08360 S EDD domain protein, DegV family
POMDABJN_00560 3e-139 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
POMDABJN_00561 9.6e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
POMDABJN_00562 0.0 yfmR S abc transporter atp-binding protein
POMDABJN_00563 7.2e-25 U response to pH
POMDABJN_00564 6.5e-77 3.6.1.13, 3.6.1.55 F AdP-ribose pyrophosphatase
POMDABJN_00565 1.7e-212 nadD 2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55 H adenylyltransferase
POMDABJN_00566 1.8e-256 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
POMDABJN_00567 1e-69 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
POMDABJN_00568 1.9e-77 K DNA-binding transcription factor activity
POMDABJN_00569 0.0 lmrA1 V abc transporter atp-binding protein
POMDABJN_00570 0.0 lmrA2 V abc transporter atp-binding protein
POMDABJN_00571 1.4e-45 K Acetyltransferase (GNAT) family
POMDABJN_00572 1.3e-120 sptS 2.7.13.3 T Histidine kinase
POMDABJN_00573 4.9e-131 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
POMDABJN_00574 9.9e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
POMDABJN_00575 1.7e-159 cvfB S Protein conserved in bacteria
POMDABJN_00576 7.4e-35 yozE S Belongs to the UPF0346 family
POMDABJN_00577 1.5e-123 usp 3.5.1.104, 3.5.1.28 CBM50 S pathogenesis
POMDABJN_00578 2.3e-61 rlpA M LysM domain protein
POMDABJN_00579 8e-191 phoH T phosphate starvation-inducible protein PhoH
POMDABJN_00583 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
POMDABJN_00584 1.8e-164 K transcriptional regulator (lysR family)
POMDABJN_00585 2.7e-185 coiA 3.6.4.12 S Competence protein
POMDABJN_00586 0.0 pepF E oligoendopeptidase F
POMDABJN_00587 5.4e-127 yrrM 2.1.1.104 S O-Methyltransferase
POMDABJN_00588 1.3e-167 prsA 3.1.3.16, 5.2.1.8 O peptidyl-prolyl cis-trans isomerase activity
POMDABJN_00589 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
POMDABJN_00590 7.9e-24 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
POMDABJN_00591 6.9e-179 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
POMDABJN_00592 1.6e-121 3.4.17.14, 3.5.1.28 NU amidase activity
POMDABJN_00593 1.5e-146 cnhA 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
POMDABJN_00594 1.7e-226 mtnE 2.6.1.83 E mutations do not affect methionine salvage in vivo however
POMDABJN_00595 1.4e-189 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
POMDABJN_00596 1.5e-222 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
POMDABJN_00597 7.9e-129 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
POMDABJN_00598 1.4e-209 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
POMDABJN_00599 2.2e-130 yxkH G deacetylase
POMDABJN_00600 2.3e-237 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
POMDABJN_00601 6.3e-154 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
POMDABJN_00602 1.4e-151 rarD S Transporter
POMDABJN_00603 2.9e-15 T peptidase
POMDABJN_00604 8.9e-14 coiA 3.6.4.12 S Competence protein
POMDABJN_00605 8e-51 S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
POMDABJN_00606 2e-45 S FMN binding
POMDABJN_00607 5.9e-54 2.3.1.128, 5.2.1.8 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
POMDABJN_00608 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
POMDABJN_00609 1.1e-250 L Transposase
POMDABJN_00610 3.2e-16 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
POMDABJN_00611 2.4e-114 atpB C it plays a direct role in the translocation of protons across the membrane
POMDABJN_00612 3.3e-78 atpF C ATP synthase F(0) sector subunit b
POMDABJN_00613 3.5e-86 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
POMDABJN_00614 3.8e-279 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
POMDABJN_00615 2.5e-158 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
POMDABJN_00616 2.7e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
POMDABJN_00617 5.2e-67 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
POMDABJN_00618 2.8e-230 ftsW D Belongs to the SEDS family
POMDABJN_00619 9.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
POMDABJN_00620 1.4e-136 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
POMDABJN_00621 1.7e-111 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
POMDABJN_00622 6.4e-162 holB 2.7.7.7 L dna polymerase iii
POMDABJN_00623 1.2e-135 yaaT S stage 0 sporulation protein
POMDABJN_00624 9.5e-55 yabA L Involved in initiation control of chromosome replication
POMDABJN_00625 4.6e-160 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
POMDABJN_00626 2.9e-232 amt P Ammonium Transporter
POMDABJN_00627 1.2e-52 glnB K Belongs to the P(II) protein family
POMDABJN_00628 9.2e-105 mur1 NU mannosyl-glycoprotein
POMDABJN_00629 2.9e-148 XK27_04800 S Sucrose-6F-phosphate phosphohydrolase
POMDABJN_00630 1.5e-114 nptA P COG1283 Na phosphate symporter
POMDABJN_00631 4e-220 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
POMDABJN_00632 7.4e-55
POMDABJN_00633 4.4e-26
POMDABJN_00634 1.2e-61
POMDABJN_00635 1.7e-32 S membrane
POMDABJN_00636 4.8e-176 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
POMDABJN_00637 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
POMDABJN_00638 4.5e-39 ynzC S UPF0291 protein
POMDABJN_00639 1.8e-254 cycA E permease
POMDABJN_00640 2.4e-09 uvrX 2.7.7.7 L impB/mucB/samB family
POMDABJN_00641 4.8e-24 pts33BCA G pts system
POMDABJN_00642 5.8e-71 pts33BCA G pts system
POMDABJN_00643 9.4e-119 pts33BCA G pts system
POMDABJN_00644 1.4e-75 2.7.1.199, 2.7.1.211 G PTS glucose transporter subunit IIA
POMDABJN_00645 3.2e-141 ppiA 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
POMDABJN_00651 1.4e-167 fhuR K transcriptional regulator (lysR family)
POMDABJN_00652 1.5e-77 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
POMDABJN_00653 2.9e-162 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
POMDABJN_00654 3.7e-88 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
POMDABJN_00655 3.7e-227 pyrP F uracil Permease
POMDABJN_00656 1e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
POMDABJN_00657 5.5e-211 carA 6.3.5.5 F carbamoyl-phosphate synthetase glutamine chain
POMDABJN_00658 0.0 carB 6.3.5.5 F carbamoyl-phosphate synthetase ammonia chain
POMDABJN_00659 5.1e-131 2.1.1.223 S Putative SAM-dependent methyltransferase
POMDABJN_00660 7.6e-21 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
POMDABJN_00661 6.9e-37 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
POMDABJN_00662 1.7e-59 V permease protein
POMDABJN_00663 4.6e-43 V efflux transmembrane transporter activity
POMDABJN_00664 7.2e-24 ytrF V efflux transmembrane transporter activity
POMDABJN_00665 5.6e-78 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
POMDABJN_00666 3.9e-52 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
POMDABJN_00668 0.0 mdlB V abc transporter atp-binding protein
POMDABJN_00669 0.0 lmrA V abc transporter atp-binding protein
POMDABJN_00670 1.3e-198 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
POMDABJN_00671 5e-125 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
POMDABJN_00672 3.3e-215 2.7.13.3 T signal transduction protein with a C-terminal ATPase domain
POMDABJN_00673 2.5e-132 rr02 KT response regulator
POMDABJN_00674 2.5e-219 2.7.7.73, 2.7.7.80 H Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
POMDABJN_00675 2.8e-168 V ABC transporter
POMDABJN_00676 5.4e-122 sagI S ABC-2 type transporter
POMDABJN_00677 6.9e-197 yceA S Belongs to the UPF0176 family
POMDABJN_00678 8e-28 XK27_00085 K Transcriptional
POMDABJN_00679 1.9e-22
POMDABJN_00680 6.5e-142 deoD_1 2.4.2.3 F Phosphorylase superfamily
POMDABJN_00681 2.5e-113 S VIT family
POMDABJN_00682 4.8e-131 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
POMDABJN_00683 7e-217 hipO 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
POMDABJN_00684 3.4e-17 ald 1.4.1.1 E alanine dehydrogenase activity
POMDABJN_00685 1.3e-46 ald 1.4.1.1 C Belongs to the AlaDH PNT family
POMDABJN_00686 7.5e-247 merA 1.16.1.1 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
POMDABJN_00687 8.8e-104 GBS0088 J protein conserved in bacteria
POMDABJN_00688 7.9e-136 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
POMDABJN_00689 1.4e-170 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
POMDABJN_00690 1e-176 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I GHMP kinases N terminal domain
POMDABJN_00691 2.4e-184 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
POMDABJN_00692 1.8e-251 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
POMDABJN_00693 1e-96 nudF 3.6.1.13 L AdP-ribose pyrophosphatase
POMDABJN_00694 2.5e-21
POMDABJN_00695 1.7e-117 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
POMDABJN_00697 3e-29 U protein secretion
POMDABJN_00698 4.2e-68 U protein secretion
POMDABJN_00699 4.4e-191 dgs 2.4.1.208 GT4 M Glycosyltransferase, group 1 family protein
POMDABJN_00700 1.2e-247 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
POMDABJN_00701 5.5e-49 XK27_13030
POMDABJN_00702 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
POMDABJN_00703 2.3e-57 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
POMDABJN_00704 1.6e-70 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
POMDABJN_00705 1.1e-161 S Protein of unknown function (DUF3114)
POMDABJN_00706 1.6e-22 S Protein of unknown function (DUF3114)
POMDABJN_00707 1.1e-116 yqfA K protein, Hemolysin III
POMDABJN_00708 1e-25 K hmm pf08876
POMDABJN_00709 2.7e-233 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
POMDABJN_00710 1.7e-218 mvaS 2.3.3.10 I synthase
POMDABJN_00711 2.2e-167 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
POMDABJN_00712 3.4e-91 folA 1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
POMDABJN_00713 9.7e-22
POMDABJN_00714 2e-225 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
POMDABJN_00715 3e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
POMDABJN_00716 1.5e-250 mmuP E amino acid
POMDABJN_00717 1.2e-177 mmuM 1.5.1.20, 2.1.1.10 H Homocysteine
POMDABJN_00718 1.4e-29 S Domain of unknown function (DUF1912)
POMDABJN_00719 4.9e-15 L Helix-hairpin-helix DNA-binding motif class 1
POMDABJN_00720 7.1e-102 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
POMDABJN_00721 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
POMDABJN_00722 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
POMDABJN_00723 2.4e-200 ilvE 2.6.1.42 E Aminotransferase
POMDABJN_00724 4.8e-16 S Protein of unknown function (DUF2969)
POMDABJN_00727 8.4e-205 rpsA 1.17.7.4 J ribosomal protein S1
POMDABJN_00730 1.1e-44 S Domain of Unknown Function with PDB structure (DUF3862)
POMDABJN_00731 1.3e-29 S Domain of Unknown Function with PDB structure (DUF3862)
POMDABJN_00732 3.7e-70 M Pfam SNARE associated Golgi protein
POMDABJN_00733 3.4e-233 murN 2.3.2.10, 2.3.2.16 V FemAB family
POMDABJN_00734 1.2e-65 S oxidoreductase
POMDABJN_00735 3.7e-48 XK27_09445 S Domain of unknown function (DUF1827)
POMDABJN_00736 1.8e-86 mutT 3.5.4.33, 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
POMDABJN_00737 0.0 clpE O Belongs to the ClpA ClpB family
POMDABJN_00738 1.2e-180 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
POMDABJN_00739 1.3e-34 ykuJ S protein conserved in bacteria
POMDABJN_00740 7.5e-118 WQ51_01820 P Binding-protein-dependent transport system inner membrane component
POMDABJN_00741 2.2e-131 glnQ 3.6.3.21 E abc transporter atp-binding protein
POMDABJN_00742 3.1e-78 feoA P FeoA domain protein
POMDABJN_00743 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
POMDABJN_00745 2.4e-104 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
POMDABJN_00746 2.2e-45 K sequence-specific DNA binding
POMDABJN_00747 1.5e-35 yugF I carboxylic ester hydrolase activity
POMDABJN_00748 7.5e-23 I Alpha/beta hydrolase family
POMDABJN_00749 3.9e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
POMDABJN_00750 7.8e-149 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
POMDABJN_00751 0.0 pbp2b 3.4.16.4 M penicillin-binding protein
POMDABJN_00752 4.9e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
POMDABJN_00753 1.7e-54 licT K transcriptional antiterminator
POMDABJN_00754 6.8e-53 licT K transcriptional antiterminator
POMDABJN_00755 5.9e-88 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
POMDABJN_00756 1.1e-63 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
POMDABJN_00757 1.3e-165 era M An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
POMDABJN_00758 1.9e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
POMDABJN_00759 1.3e-105 coaE 2.7.1.24, 3.2.2.23, 4.2.99.18 GH23 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
POMDABJN_00760 2.1e-219 mdtG EGP Major facilitator Superfamily
POMDABJN_00761 2e-33 secG U Preprotein translocase subunit SecG
POMDABJN_00762 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
POMDABJN_00763 1.1e-80 smpB O the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
POMDABJN_00764 2.8e-276 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
POMDABJN_00765 1.7e-63 yugI 5.3.1.9 J RNA binding protein, contains ribosomal protein S1 domain
POMDABJN_00766 4.2e-211 pepQ 3.4.13.9 E Belongs to the peptidase M24B family
POMDABJN_00767 4.4e-183 ccpA K Catabolite control protein A
POMDABJN_00768 2.8e-28 yyaQ S YjbR
POMDABJN_00769 6.6e-101 yyaQ V Protein conserved in bacteria
POMDABJN_00770 1.3e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
POMDABJN_00771 1e-78 yueI S Protein of unknown function (DUF1694)
POMDABJN_00772 9.6e-247 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
POMDABJN_00773 2e-25 WQ51_00785
POMDABJN_00774 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
POMDABJN_00775 2e-219 ywbD 2.1.1.191 J Methyltransferase
POMDABJN_00776 8.6e-122 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
POMDABJN_00777 1.7e-162 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
POMDABJN_00778 3.5e-202 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
POMDABJN_00779 4.5e-219 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
POMDABJN_00780 2.2e-207 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
POMDABJN_00781 3.2e-53 yheA S Belongs to the UPF0342 family
POMDABJN_00782 3e-173 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
POMDABJN_00783 2.6e-236 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
POMDABJN_00784 1.7e-87 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
POMDABJN_00785 6.7e-153 pheA 4.2.1.51 E Prephenate dehydratase
POMDABJN_00786 6.4e-252 msrR K Transcriptional regulator
POMDABJN_00787 2.2e-149 ydiA P C4-dicarboxylate transporter malic acid transport protein
POMDABJN_00788 9.1e-203 I acyl-CoA dehydrogenase
POMDABJN_00789 4.5e-97 mip S hydroperoxide reductase activity
POMDABJN_00790 1.8e-256 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
POMDABJN_00791 8.9e-20
POMDABJN_00792 3.2e-46
POMDABJN_00793 1.5e-18 K Cro/C1-type HTH DNA-binding domain
POMDABJN_00794 3e-45 dam 2.1.1.72 L D12 class N6 adenine-specific DNA methyltransferase
POMDABJN_00795 7.3e-28 estA E GDSL-like Lipase/Acylhydrolase
POMDABJN_00796 1.1e-94
POMDABJN_00797 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
POMDABJN_00798 4.2e-172 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
POMDABJN_00799 1.8e-53 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
POMDABJN_00800 9e-195 S CRISPR-associated protein Csn2 subfamily St
POMDABJN_00801 2.3e-145 ycgQ S TIGR03943 family
POMDABJN_00802 1.2e-155 XK27_03015 S permease
POMDABJN_00804 0.0 yhgF K Transcriptional accessory protein
POMDABJN_00805 9.9e-42 pspC KT PspC domain
POMDABJN_00806 1e-170 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
POMDABJN_00807 4e-147 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
POMDABJN_00809 5.5e-69 ytxH S General stress protein
POMDABJN_00811 2e-177 yegQ O Peptidase U32
POMDABJN_00812 3.4e-252 yegQ O Peptidase U32
POMDABJN_00813 8.1e-46 S CHY zinc finger
POMDABJN_00814 8.4e-88 bioY S biotin synthase
POMDABJN_00816 1.1e-33 XK27_12190 S protein conserved in bacteria
POMDABJN_00817 1.1e-234 mntH P H( )-stimulated, divalent metal cation uptake system
POMDABJN_00818 4.8e-11
POMDABJN_00819 6e-209 dcm 2.1.1.37 H C-5 cytosine-specific DNA methylase
POMDABJN_00820 4.1e-225 mutH L DNA mismatch repair enzyme MutH
POMDABJN_00821 5.2e-29 S SIR2-like domain
POMDABJN_00822 1.2e-33 S SIR2-like domain
POMDABJN_00823 1.9e-286 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
POMDABJN_00824 1.5e-154 M LysM domain
POMDABJN_00825 5.9e-16
POMDABJN_00826 9.8e-174 S hydrolase
POMDABJN_00827 5.1e-116 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase
POMDABJN_00828 7.9e-82 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
POMDABJN_00829 2.2e-144 XK27_00880 3.5.1.28 M Glycosyl hydrolase, family 25
POMDABJN_00830 2.1e-27 P Hemerythrin HHE cation binding domain protein
POMDABJN_00831 1.4e-113 1.14.14.5 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
POMDABJN_00832 1.7e-10 MA20_36090 S Protein of unknown function (DUF2974)
POMDABJN_00833 8e-18 MA20_36090 S Protein of unknown function (DUF2974)
POMDABJN_00834 8.3e-76 sdh 1.1.1.276, 1.1.1.313, 1.1.1.381 S Belongs to the short-chain dehydrogenases reductases (SDR) family
POMDABJN_00835 1.4e-44 sdh 1.1.1.276, 1.1.1.313, 1.1.1.381 S Belongs to the short-chain dehydrogenases reductases (SDR) family
POMDABJN_00836 0.0 hsdR 3.1.21.3 V Type I restriction enzyme R protein N terminus (HSDR_N)
POMDABJN_00837 7.3e-289 hsdM 2.1.1.72 V N-6 DNA Methylase
POMDABJN_00838 9.3e-68 hsdS 3.1.21.3 L Type I restriction modification DNA specificity domain
POMDABJN_00840 2.5e-44
POMDABJN_00841 3e-38
POMDABJN_00842 8.8e-157 spd F DNA RNA non-specific endonuclease
POMDABJN_00843 1.5e-92 lemA S LemA family
POMDABJN_00844 1.8e-135 htpX O Belongs to the peptidase M48B family
POMDABJN_00845 5.1e-73 S Psort location CytoplasmicMembrane, score
POMDABJN_00846 6.2e-56 S Domain of unknown function (DUF4430)
POMDABJN_00847 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
POMDABJN_00848 2.4e-184 holA 2.7.7.7 L DNA polymerase III delta subunit
POMDABJN_00849 2.5e-112 sodA 1.15.1.1 C radicals which are normally produced within the cells and which are toxic to biological systems
POMDABJN_00850 1.4e-190 3.5.2.6 V D-alanyl-D-alanine carboxypeptidase
POMDABJN_00851 1.5e-115 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
POMDABJN_00852 1.6e-91 dps P Belongs to the Dps family
POMDABJN_00853 1.1e-80 perR P Belongs to the Fur family
POMDABJN_00854 8.4e-28 yqgQ S protein conserved in bacteria
POMDABJN_00855 1.6e-177 glk 2.7.1.2 G Glucokinase
POMDABJN_00856 0.0 typA T GTP-binding protein TypA
POMDABJN_00858 1.6e-252 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
POMDABJN_00859 1e-201 murG 2.4.1.227 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
POMDABJN_00860 6.9e-177 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
POMDABJN_00861 1.1e-251 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
POMDABJN_00862 5.4e-237 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
POMDABJN_00863 2.7e-123 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
POMDABJN_00864 2e-95 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
POMDABJN_00865 8.8e-35 yggT D integral membrane protein
POMDABJN_00866 4.7e-143 ylmH T S4 RNA-binding domain
POMDABJN_00867 3.3e-134 divIVA D Cell division protein DivIVA
POMDABJN_00868 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
POMDABJN_00869 3.2e-45 L Transposase
POMDABJN_00871 8.8e-229 mntH P Mn2 and Fe2 transporters of the NRAMP family
POMDABJN_00872 2e-45 rpmE2 J 50S ribosomal protein L31
POMDABJN_00873 1.9e-175 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
POMDABJN_00874 1e-184 nrnA 3.1.13.3, 3.1.3.7 S domain protein
POMDABJN_00875 8.9e-155 gst O Glutathione S-transferase
POMDABJN_00876 4.6e-188 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
POMDABJN_00877 4.5e-111 tdk 2.7.1.21 F thymidine kinase
POMDABJN_00878 3e-193 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
POMDABJN_00879 1.2e-154 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
POMDABJN_00880 9.7e-109 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
POMDABJN_00881 1.8e-234 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
POMDABJN_00882 6e-177 ndpA S 37-kD nucleoid-associated bacterial protein
POMDABJN_00883 2.4e-107 pvaA M lytic transglycosylase activity
POMDABJN_00884 0.0 yfiB1 V abc transporter atp-binding protein
POMDABJN_00885 0.0 XK27_10035 V abc transporter atp-binding protein
POMDABJN_00886 1.7e-09 S D-Ala-teichoic acid biosynthesis protein
POMDABJN_00887 1.4e-297 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
POMDABJN_00888 4.6e-238 dltB M Membrane protein involved in D-alanine export
POMDABJN_00889 1.7e-35 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
POMDABJN_00890 5.2e-229 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
POMDABJN_00891 2.5e-250 L Transposase
POMDABJN_00892 0.0 3.6.3.8 P cation transport ATPase
POMDABJN_00893 0.0 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH component I
POMDABJN_00894 5.1e-106 V Abi-like protein
POMDABJN_00895 1.7e-146 2.1.1.37 H cytosine-specific methyltransferase
POMDABJN_00896 2.6e-72 hpaIIR 3.1.21.4 L HpaII restriction endonuclease
POMDABJN_00897 3e-44 ymbI L transposase activity
POMDABJN_00898 4e-22 L Belongs to the 'phage' integrase family
POMDABJN_00899 1.4e-66 S tRNA_anti-like
POMDABJN_00900 2e-103
POMDABJN_00902 2.3e-12
POMDABJN_00904 2e-296 S DNA primase
POMDABJN_00905 3e-164 KL Phage plasmid primase P4 family
POMDABJN_00906 6.9e-22
POMDABJN_00911 5.5e-17 K TRANSCRIPTIONal
POMDABJN_00912 6e-39 K Helix-turn-helix
POMDABJN_00913 7.1e-217 sip L Belongs to the 'phage' integrase family
POMDABJN_00915 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
POMDABJN_00916 7.3e-166 metF 1.5.1.20 C reductase
POMDABJN_00917 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
POMDABJN_00918 1.6e-92 panT S ECF transporter, substrate-specific component
POMDABJN_00919 4.8e-94 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
POMDABJN_00920 6.2e-120 coaB 4.1.1.36, 6.3.2.5 H Phosphopantothenate-cysteine ligase
POMDABJN_00921 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
POMDABJN_00922 6.4e-66 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
POMDABJN_00923 4.3e-41 T PhoQ Sensor
POMDABJN_00924 1.1e-13 T PhoQ Sensor
POMDABJN_00925 9.2e-110 T PhoQ Sensor
POMDABJN_00926 1.2e-165 L integrase core domain
POMDABJN_00927 1.6e-71 L Transposase
POMDABJN_00928 2e-40 L Transposase
POMDABJN_00929 2.1e-30 rpsT J rRNA binding
POMDABJN_00930 2.5e-172 coaA 2.7.1.33 F Pantothenic acid kinase
POMDABJN_00931 1.8e-107 rsmC 2.1.1.172 J Methyltransferase small domain protein
POMDABJN_00932 1.3e-24 pdp 2.4.2.2, 2.4.2.4 F phosphorylase activity
POMDABJN_00933 1.7e-100 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
POMDABJN_00934 5.5e-29 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
POMDABJN_00935 1.5e-62 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
POMDABJN_00936 2.2e-47 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
POMDABJN_00937 1.5e-189 tcsA S ABC-type transport system, periplasmic component surface lipoprotein
POMDABJN_00938 2.7e-280 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
POMDABJN_00939 4.7e-191 yufP S Belongs to the binding-protein-dependent transport system permease family
POMDABJN_00940 4.8e-171 yufQ S Belongs to the binding-protein-dependent transport system permease family
POMDABJN_00941 4e-121 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
POMDABJN_00942 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
POMDABJN_00943 3.1e-81 ypmB S Protein conserved in bacteria
POMDABJN_00944 6.5e-218 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
POMDABJN_00945 1.7e-262 asnS 6.1.1.22 J Catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
POMDABJN_00946 1.5e-07
POMDABJN_00947 2.4e-30
POMDABJN_00948 3e-13
POMDABJN_00949 3e-63 tdcF 3.5.99.10 J endoribonuclease L-PSP
POMDABJN_00950 2e-123 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
POMDABJN_00951 2.2e-81 queD 4.1.2.50, 4.2.3.12 H synthase
POMDABJN_00952 3.9e-133 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
POMDABJN_00953 2.5e-94 queF 1.7.1.13 S Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily
POMDABJN_00954 4.2e-18 D nuclear chromosome segregation
POMDABJN_00955 5.3e-136 yejC S cyclic nucleotide-binding protein
POMDABJN_00956 1.2e-163 rapZ S Displays ATPase and GTPase activities
POMDABJN_00957 2.8e-182 ybhK S Required for morphogenesis under gluconeogenic growth conditions
POMDABJN_00958 8.7e-162 whiA K May be required for sporulation
POMDABJN_00959 8e-90 pepD E Dipeptidase
POMDABJN_00960 5.8e-41 pepD E dipeptidase activity
POMDABJN_00961 5.4e-32 cspD K Cold shock protein domain
POMDABJN_00962 1.6e-249 L Transposase
POMDABJN_00963 9.4e-43 K Cold-Shock Protein
POMDABJN_00964 2.9e-131 L Transposase
POMDABJN_00965 8e-59 L Transposase
POMDABJN_00966 0.0 copB 3.6.3.4 P P-type ATPase
POMDABJN_00967 1.6e-88 L Transposase
POMDABJN_00968 6.6e-94 L Transposase
POMDABJN_00969 4.4e-194 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
POMDABJN_00970 2.3e-170 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
POMDABJN_00971 3.5e-219 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
POMDABJN_00972 3.3e-98 cysE 2.3.1.30 E serine acetyltransferase
POMDABJN_00973 6.3e-54 L Transposase
POMDABJN_00974 5.4e-104 L Transposase
POMDABJN_00975 5.2e-56 hsdS 2.1.1.72, 3.1.21.3 V type I restriction modification DNA specificity domain
POMDABJN_00976 5.2e-113 hsdM 2.1.1.72 V type I restriction-modification system
POMDABJN_00977 2.9e-154 glcU U Glucose uptake
POMDABJN_00978 1.1e-08 mycA 4.2.1.53 S Myosin-crossreactive antigen
POMDABJN_00979 3.4e-79 hsdM 2.1.1.72 V HsdM N-terminal domain
POMDABJN_00980 3.7e-88 XK27_10720 D peptidase activity
POMDABJN_00981 2.1e-293 adcA P Belongs to the bacterial solute-binding protein 9 family
POMDABJN_00982 3.4e-09
POMDABJN_00983 1.5e-170 yeiH S Membrane
POMDABJN_00984 1.9e-119 mur1 NU muramidase
POMDABJN_00985 6.6e-71 L transposition
POMDABJN_00986 4.5e-166 cpsY K Transcriptional regulator
POMDABJN_00987 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
POMDABJN_00988 2.5e-58 phnA P Alkylphosphonate utilization operon protein PhnA
POMDABJN_00989 5.3e-105 artQ P ABC transporter (Permease
POMDABJN_00990 3.4e-112 glnQ 3.6.3.21 E abc transporter atp-binding protein
POMDABJN_00991 1.4e-158 aatB ET ABC transporter substrate-binding protein
POMDABJN_00992 3.1e-142 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
POMDABJN_00993 2.3e-62 adhP 1.1.1.1 C alcohol dehydrogenase
POMDABJN_00994 2.8e-13 adhP 1.1.1.1 C alcohol dehydrogenase
POMDABJN_00995 3.2e-78 adhP 1.1.1.1 C alcohol dehydrogenase
POMDABJN_00997 3e-21
POMDABJN_00998 0.0 res_1 3.1.21.5 S Type III restriction
POMDABJN_00999 2e-158 sthIM 2.1.1.72 L DNA methylase
POMDABJN_01000 8.7e-88 sthIM 2.1.1.72 L Adenine specific DNA methylase Mod
POMDABJN_01001 3.9e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
POMDABJN_01002 1.6e-126 gntR1 K transcriptional
POMDABJN_01003 1.1e-53 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
POMDABJN_01004 1.3e-269 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
POMDABJN_01005 2.4e-87 niaX
POMDABJN_01006 8.6e-90 niaR S small molecule binding protein (contains 3H domain)
POMDABJN_01007 6.9e-127 K DNA-binding helix-turn-helix protein
POMDABJN_01008 1.4e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
POMDABJN_01009 1.5e-135 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
POMDABJN_01010 1.1e-167 GK ROK family
POMDABJN_01011 2.4e-158 dprA LU DNA protecting protein DprA
POMDABJN_01012 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
POMDABJN_01013 5.1e-153 S TraX protein
POMDABJN_01014 2.2e-122 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
POMDABJN_01015 6.9e-251 T PhoQ Sensor
POMDABJN_01016 6.6e-259 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
POMDABJN_01017 1.9e-152 XK27_05470 E Methionine synthase
POMDABJN_01018 1.7e-75 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
POMDABJN_01019 2.7e-48 pspE P Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
POMDABJN_01020 6.8e-51 IQ Acetoin reductase
POMDABJN_01021 3.9e-19 IQ Acetoin reductase
POMDABJN_01022 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
POMDABJN_01026 4.1e-53 K peptidyl-tyrosine sulfation
POMDABJN_01027 1.8e-156 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
POMDABJN_01030 1.3e-212 pqqE C radical SAM domain protein
POMDABJN_01031 3.9e-136 speB 3.5.3.11 E hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
POMDABJN_01032 6.6e-61 EGP Major facilitator Superfamily
POMDABJN_01033 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
POMDABJN_01034 3e-133 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
POMDABJN_01035 1e-193 L Transposase
POMDABJN_01036 6.1e-13 L Transposase
POMDABJN_01038 1.2e-103 K Transcriptional regulator, TetR family
POMDABJN_01039 1.2e-158 czcD P cation diffusion facilitator family transporter
POMDABJN_01040 2.7e-210 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
POMDABJN_01041 6.2e-196 adhB 1.1.1.1, 1.1.1.14 E Dehydrogenase
POMDABJN_01042 6e-08 S Hydrolases of the alpha beta superfamily
POMDABJN_01043 1.8e-16 S Alpha/beta hydrolase of unknown function (DUF915)
POMDABJN_01044 3.8e-78 S Alpha/beta hydrolase of unknown function (DUF915)
POMDABJN_01047 2.6e-143 2.4.2.3 F Phosphorylase superfamily
POMDABJN_01048 4.1e-118 gph 3.1.3.18 S HAD hydrolase, family IA, variant 1
POMDABJN_01049 1.8e-24 yclQ P ABC-type enterochelin transport system, periplasmic component
POMDABJN_01050 3.6e-18 yclQ P ABC-type enterochelin transport system, periplasmic component
POMDABJN_01051 9.6e-72 dinF V Mate efflux family protein
POMDABJN_01052 6.3e-12 dinF V Mate efflux family protein
POMDABJN_01053 5.1e-26 dinF V drug transmembrane transporter activity
POMDABJN_01054 1.1e-265 S Psort location CytoplasmicMembrane, score
POMDABJN_01055 2.3e-309 FbpA K RNA-binding protein homologous to eukaryotic snRNP
POMDABJN_01057 2e-113 S TraX protein
POMDABJN_01058 5e-96 thiJ 2.7.11.1, 3.5.1.124 S DJ-1 family
POMDABJN_01059 2.2e-148 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
POMDABJN_01060 1.6e-174 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
POMDABJN_01061 8.9e-184 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
POMDABJN_01062 3.7e-54 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
POMDABJN_01063 1.2e-132 cas6 S CRISPR-associated endoribonuclease Cas6
POMDABJN_01064 0.0 csm1 S CRISPR-associated protein Csm1 family
POMDABJN_01065 2.2e-37 csm2 L Csm2 Type III-A
POMDABJN_01066 4.2e-113 csm3 L RAMP superfamily
POMDABJN_01067 9.2e-164 csm4 L CRISPR-associated RAMP protein, Csm4 family
POMDABJN_01068 4.4e-205 csm5 L CRISPR-associated RAMP protein, Csm5 family
POMDABJN_01069 2.1e-14 csm6 S Psort location Cytoplasmic, score
POMDABJN_01070 5.2e-74 csm6 S Psort location Cytoplasmic, score
POMDABJN_01071 7e-127 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
POMDABJN_01072 7.5e-112 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
POMDABJN_01073 1.2e-63 nylA 3.5.1.4 J Belongs to the amidase family
POMDABJN_01075 5.5e-267 dtpT E transporter
POMDABJN_01076 1e-103 nylA 3.5.1.4 J Belongs to the amidase family
POMDABJN_01077 8.8e-134 yckB ET Belongs to the bacterial solute-binding protein 3 family
POMDABJN_01078 1.8e-67 yecS P ABC transporter (Permease
POMDABJN_01080 2.1e-110 sasH 3.1.3.5, 3.6.1.45 F Belongs to the 5'-nucleotidase family
POMDABJN_01081 3.7e-60 sasH 3.1.3.5, 3.6.1.45 F Belongs to the 5'-nucleotidase family
POMDABJN_01082 7.6e-64 yfiF3 K sequence-specific DNA binding
POMDABJN_01083 4e-22 bglC K Transcriptional regulator
POMDABJN_01084 1.3e-246 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
POMDABJN_01085 1.2e-239 agcS E (Alanine) symporter
POMDABJN_01086 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
POMDABJN_01087 5.9e-241 metY 2.5.1.49 E o-acetylhomoserine
POMDABJN_01088 1.3e-131 S haloacid dehalogenase-like hydrolase
POMDABJN_01089 3.5e-88 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
POMDABJN_01090 1.1e-110 hsdS2 2.1.1.72 V Type I restriction modification DNA specificity domain
POMDABJN_01091 1.7e-145 XK27_04775 S hemerythrin HHE cation binding domain
POMDABJN_01092 5.2e-22 XK27_04775 P Hemerythrin HHE cation binding domain protein
POMDABJN_01093 2.4e-150 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
POMDABJN_01094 2.6e-174 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
POMDABJN_01095 1.4e-71 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
POMDABJN_01096 2.3e-44 yktA S Belongs to the UPF0223 family
POMDABJN_01097 6.5e-142 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
POMDABJN_01098 3e-256 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
POMDABJN_01099 1.3e-157 pstS P phosphate
POMDABJN_01100 7.2e-156 pstC P probably responsible for the translocation of the substrate across the membrane
POMDABJN_01101 5.9e-155 pstA P phosphate transport system permease
POMDABJN_01102 1e-150 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
POMDABJN_01103 1.7e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
POMDABJN_01104 2.4e-113 phoU P Plays a role in the regulation of phosphate uptake
POMDABJN_01105 0.0 pepN 3.4.11.2 E aminopeptidase
POMDABJN_01106 1.6e-194 xerS D Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division
POMDABJN_01107 1.3e-187 lplA 6.3.1.20 H Lipoate-protein ligase
POMDABJN_01109 3.7e-09
POMDABJN_01110 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
POMDABJN_01111 3.4e-304 malQ 2.4.1.25 GH77 G 4-alpha-glucanotransferase
POMDABJN_01112 1.1e-250 L Transposase
POMDABJN_01113 1.3e-48 malR K Transcriptional regulator
POMDABJN_01114 2.3e-23 L Transposase
POMDABJN_01115 4.6e-25 tatA U protein secretion
POMDABJN_01116 5.8e-121 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
POMDABJN_01117 3.9e-301 ywbL P COG0672 High-affinity Fe2 Pb2 permease
POMDABJN_01118 1.5e-233 ycdB P peroxidase
POMDABJN_01119 4.6e-152 ycdO P periplasmic lipoprotein involved in iron transport
POMDABJN_01120 2.2e-177 fatB P ABC-type enterochelin transport system, periplasmic component
POMDABJN_01121 6.8e-136 yclP 3.6.3.34 P abc transporter atp-binding protein
POMDABJN_01122 1.9e-167 fatC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
POMDABJN_01123 4e-165 yclN P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
POMDABJN_01124 2e-139 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
POMDABJN_01125 3.8e-54 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
POMDABJN_01126 6.8e-210 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
POMDABJN_01127 1.9e-37 3.5.1.28 NU amidase activity
POMDABJN_01128 8.5e-266 3.5.1.28 NU amidase activity
POMDABJN_01129 3.6e-82 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
POMDABJN_01130 2.6e-20 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
POMDABJN_01131 0.0 lpdA 1.8.1.4 C Dehydrogenase
POMDABJN_01132 1.8e-198 acoC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
POMDABJN_01133 3.7e-182 acoB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
POMDABJN_01134 6e-185 acoA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
POMDABJN_01135 5e-38 P membrane protein (DUF2207)
POMDABJN_01136 5.7e-66 S the current gene model (or a revised gene model) may contain a frame shift
POMDABJN_01137 1.1e-234 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
POMDABJN_01138 7.2e-126 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
POMDABJN_01139 4e-215 yeaB K Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
POMDABJN_01140 5.4e-19 dacA1 3.4.16.4 M Belongs to the peptidase S11 family
POMDABJN_01141 2.9e-21 dacA1 3.4.16.4 M Belongs to the peptidase S11 family
POMDABJN_01142 3.9e-24 3.4.16.4 M Belongs to the peptidase S11 family
POMDABJN_01143 2.3e-26 3.4.16.4 M Belongs to the peptidase S11 family
POMDABJN_01144 4.3e-83 3.4.16.4 M Belongs to the peptidase S11 family
POMDABJN_01145 1.1e-158 rssA S Phospholipase, patatin family
POMDABJN_01146 1.9e-59 estA E GDSL-like protein
POMDABJN_01147 5.5e-34 estA E Lysophospholipase L1 and related esterases
POMDABJN_01148 8.5e-290 S unusual protein kinase
POMDABJN_01149 4.9e-39 S granule-associated protein
POMDABJN_01150 3.2e-36 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
POMDABJN_01151 2.4e-98 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
POMDABJN_01152 2e-18 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
POMDABJN_01153 1.1e-198 S hmm pf01594
POMDABJN_01154 2.5e-99 G Belongs to the phosphoglycerate mutase family
POMDABJN_01155 7.2e-104 G Belongs to the phosphoglycerate mutase family
POMDABJN_01156 1.1e-95 pgm G Belongs to the phosphoglycerate mutase family
POMDABJN_01157 5.6e-65 supH 3.1.3.102, 3.1.3.104 Q phosphatase activity
POMDABJN_01158 5.4e-15 supH 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
POMDABJN_01159 2.2e-94 V VanZ like family
POMDABJN_01160 3.1e-37 L Transposase
POMDABJN_01161 6.2e-112 L the current gene model (or a revised gene model) may contain a frame shift
POMDABJN_01162 6.4e-33 cpsJ S Glycosyltransferase like family 2
POMDABJN_01163 7.8e-16
POMDABJN_01164 6.5e-72 M Glycosyltransferase sugar-binding region containing DXD motif
POMDABJN_01165 1.9e-41 pssE S Glycosyltransferase family 28 C-terminal domain
POMDABJN_01166 1.4e-72 cpsF M Oligosaccharide biosynthesis protein Alg14 like
POMDABJN_01167 1.2e-70 rfbP 2.7.8.6 M Bacterial sugar transferase
POMDABJN_01168 3.3e-37 L transposase activity
POMDABJN_01169 1.1e-60 L Integrase core domain
POMDABJN_01170 3.2e-71 L COG2801 Transposase and inactivated derivatives
POMDABJN_01171 1.1e-235 cps1C S Polysaccharide biosynthesis protein
POMDABJN_01172 1.3e-23 L Transposase
POMDABJN_01173 1.3e-199 L Transposase
POMDABJN_01174 6.9e-96 2.7.8.12 GT2 S Glycosyltransferase like family 2
POMDABJN_01175 8.8e-139 L Integrase core domain
POMDABJN_01176 2.2e-22 L Transposase
POMDABJN_01177 9.7e-23 rgpAc GT4 M group 1 family protein
POMDABJN_01178 1.7e-249 cpsE M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
POMDABJN_01179 9e-112 cpsD D COG0489 ATPases involved in chromosome partitioning
POMDABJN_01180 1.1e-103 cps4C M biosynthesis protein
POMDABJN_01181 3e-136 cpsB 3.1.3.48 GM Capsular polysaccharide biosynthesis protein
POMDABJN_01182 4.2e-251 cps4A K Cell envelope-like function transcriptional attenuator common domain protein
POMDABJN_01183 1.2e-129 deoD 2.4.2.1, 2.4.2.28 F purine nucleoside phosphorylase
POMDABJN_01184 4.1e-38 yfeJ 6.3.5.2 F glutamine amidotransferase
POMDABJN_01185 2.2e-67 yfeJ 6.3.5.2 F glutamine amidotransferase
POMDABJN_01186 6.1e-36 clcA_2 P chloride channel
POMDABJN_01187 1.2e-149 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
POMDABJN_01188 9.6e-47 S Protein of unknown function (DUF1697)
POMDABJN_01189 2.9e-237 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
POMDABJN_01190 1.7e-122 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
POMDABJN_01192 1.5e-111 ung2 3.2.2.27 L Uracil-DNA glycosylase
POMDABJN_01193 2.4e-275 pepV 3.5.1.18 E Dipeptidase
POMDABJN_01194 6.4e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
POMDABJN_01195 1.7e-47 XK27_03610 K Gnat family
POMDABJN_01196 1.6e-24 L Transposase
POMDABJN_01197 1.5e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
POMDABJN_01198 2.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
POMDABJN_01199 3.5e-86 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
POMDABJN_01200 2.5e-121 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
POMDABJN_01201 3.9e-15 M LysM domain
POMDABJN_01202 2.9e-90 ebsA S Family of unknown function (DUF5322)
POMDABJN_01203 1.8e-234 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
POMDABJN_01204 4.2e-98 lepB 3.4.21.89 U Belongs to the peptidase S26 family
POMDABJN_01205 4.9e-224 G COG0457 FOG TPR repeat
POMDABJN_01206 1.3e-178 yubA S permease
POMDABJN_01207 1.7e-92 mutX 3.6.1.55 F NTP pyrophosphohydrolases including oxidative damage repair enzymes
POMDABJN_01208 4.7e-163 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
POMDABJN_01209 2.5e-124 ftsE D cell division ATP-binding protein FtsE
POMDABJN_01210 1.6e-182 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
POMDABJN_01211 2.7e-202 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
POMDABJN_01212 9.2e-183 yjjH S Calcineurin-like phosphoesterase
POMDABJN_01213 6.7e-136 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
POMDABJN_01214 0.0 pacL 3.6.3.8 P cation transport ATPase
POMDABJN_01215 2.6e-67 ywiB S Domain of unknown function (DUF1934)
POMDABJN_01216 8.3e-51 XK27_00115 2.3.1.128 K acetyltransferase
POMDABJN_01217 4.6e-146 yidA S hydrolases of the HAD superfamily
POMDABJN_01218 5.3e-231 murM 2.3.2.10, 2.3.2.16 V protein involved in methicillin resistance
POMDABJN_01219 5e-35 F Protein of unknown function (DUF454)
POMDABJN_01220 2.1e-154 vicX 3.1.26.11 S Metal-dependent hydrolases of the beta-lactamase superfamily I
POMDABJN_01221 1.5e-247 vicK 2.7.13.3 T Histidine kinase
POMDABJN_01222 9.9e-129 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
POMDABJN_01223 2.1e-140 glnQ 3.6.3.21 E abc transporter atp-binding protein
POMDABJN_01224 3.5e-149 peb1A ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
POMDABJN_01225 8e-115 gltJ P ABC transporter (Permease
POMDABJN_01226 4.2e-110 tcyB_2 P ABC transporter (permease)
POMDABJN_01227 2.4e-124 endA F DNA RNA non-specific endonuclease
POMDABJN_01228 1.2e-25 epuA S DNA-directed RNA polymerase subunit beta
POMDABJN_01229 9.4e-231 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
POMDABJN_01231 1.5e-194 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
POMDABJN_01232 4.9e-20 G Domain of unknown function (DUF4832)
POMDABJN_01233 2.1e-203 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
POMDABJN_01234 4.2e-175 birA 6.3.4.15 HK Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
POMDABJN_01235 3.2e-295 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
POMDABJN_01236 6.1e-88 ytsP 1.8.4.14 T GAF domain-containing protein
POMDABJN_01237 6.4e-165 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
POMDABJN_01238 1.2e-19 WQ51_02665 S Protein of unknown function (DUF3042)
POMDABJN_01242 8.5e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
POMDABJN_01243 2.6e-217 XK27_05110 P chloride
POMDABJN_01244 9.6e-40 pheA 1.3.1.12, 2.3.1.79, 4.2.1.51, 5.4.99.5 E Chorismate mutase
POMDABJN_01245 9.2e-281 clcA P Chloride transporter, ClC family
POMDABJN_01246 5.1e-75 fld C Flavodoxin
POMDABJN_01247 2.5e-14 XK27_08880
POMDABJN_01248 4.7e-126 XK27_08875 O Zinc-dependent metalloprotease
POMDABJN_01249 1.6e-151 estA CE1 S Putative esterase
POMDABJN_01250 1e-309 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
POMDABJN_01251 4.4e-135 XK27_08845 S abc transporter atp-binding protein
POMDABJN_01252 2.2e-146 XK27_08840 S Belongs to the binding-protein-dependent transport system permease family
POMDABJN_01253 9.5e-178 XK27_08835 S ABC transporter substrate binding protein
POMDABJN_01254 6.9e-30 Q the current gene model (or a revised gene model) may contain a frame shift
POMDABJN_01255 6.1e-28 Q the current gene model (or a revised gene model) may contain a frame shift
POMDABJN_01258 1.3e-276 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
POMDABJN_01259 1.2e-188 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
POMDABJN_01260 0.0 dnaE 2.7.7.7 L DNA polymerase
POMDABJN_01261 1.4e-152 sua5 2.7.7.87 J Belongs to the SUA5 family
POMDABJN_01262 3.1e-112 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
POMDABJN_01263 6.8e-275 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
POMDABJN_01264 2.5e-43 ysdA L Membrane
POMDABJN_01265 7.3e-189 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
POMDABJN_01266 3.4e-291 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
POMDABJN_01267 4.6e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
POMDABJN_01268 1.1e-178 pyrD 1.3.1.14, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate
POMDABJN_01270 2.8e-39 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
POMDABJN_01271 1.7e-83 ypmS S Protein conserved in bacteria
POMDABJN_01272 3.9e-143 ypmR E lipolytic protein G-D-S-L family
POMDABJN_01273 1e-148 DegV S DegV family
POMDABJN_01274 5.8e-305 recN L May be involved in recombinational repair of damaged DNA
POMDABJN_01275 3.7e-73 argR K Regulates arginine biosynthesis genes
POMDABJN_01276 4.7e-157 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
POMDABJN_01277 6.6e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
POMDABJN_01278 3.5e-29 xseB 3.1.11.6 L exodeoxyribonuclease VII activity
POMDABJN_01279 1.2e-247 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
POMDABJN_01282 3.4e-120 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
POMDABJN_01283 2.9e-125 dnaD
POMDABJN_01284 1.3e-181 metA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
POMDABJN_01285 2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
POMDABJN_01286 0.0 recJ L Single-strand DNA-specific exonuclease, C terminal domain
POMDABJN_01287 6.7e-139 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
POMDABJN_01288 2e-174 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
POMDABJN_01289 1e-116 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
POMDABJN_01290 7.8e-222 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
POMDABJN_01291 5.6e-240 rodA D Belongs to the SEDS family
POMDABJN_01292 1.8e-50 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP
POMDABJN_01293 1.2e-60 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
POMDABJN_01294 1e-108 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
POMDABJN_01295 8.3e-21 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
POMDABJN_01296 3.8e-128 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
POMDABJN_01297 1.2e-109 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
POMDABJN_01298 1.5e-106 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
POMDABJN_01299 1.1e-234 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
POMDABJN_01300 2.3e-116 hisG 2.4.2.17 E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
POMDABJN_01301 5.7e-183 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
POMDABJN_01302 2.1e-196 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
POMDABJN_01304 4.2e-86 L Integrase core domain protein
POMDABJN_01305 4.3e-53 L transposition
POMDABJN_01306 1.8e-21 L Transposase
POMDABJN_01307 5.2e-36 L transposase activity
POMDABJN_01308 1.3e-22 XK27_08085
POMDABJN_01309 5.6e-92 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
POMDABJN_01310 2.3e-09 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
POMDABJN_01311 2e-140 hisK 3.1.3.15 E Histidinol phosphatase and related hydrolases of the PHP family
POMDABJN_01312 4e-121 ylfI S tigr01906
POMDABJN_01313 5.9e-143 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
POMDABJN_01314 1.5e-143 fat 3.1.2.21 I Acyl-ACP thioesterase
POMDABJN_01315 4.1e-217 hemN H Involved in the biosynthesis of porphyrin-containing compound
POMDABJN_01318 1.9e-205 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
POMDABJN_01319 8.3e-113 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
POMDABJN_01320 1.9e-161 rfbA 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
POMDABJN_01321 2.1e-207 yurR 1.4.5.1 E oxidoreductase
POMDABJN_01322 5.7e-102 zupT P Mediates zinc uptake. May also transport other divalent cations
POMDABJN_01323 8.1e-148 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
POMDABJN_01324 7.9e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
POMDABJN_01325 1.3e-70 gtrA S GtrA-like protein
POMDABJN_01326 1.5e-250 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
POMDABJN_01327 2.3e-168 ybbR S Protein conserved in bacteria
POMDABJN_01328 1.2e-123 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
POMDABJN_01329 1.1e-253 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain protein
POMDABJN_01330 8.7e-150 cobQ S glutamine amidotransferase
POMDABJN_01331 0.0 mprF 2.3.2.3 J Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
POMDABJN_01332 2.2e-131 pip 1.11.1.10 S Alpha beta hydrolase
POMDABJN_01333 6.3e-13 MA20_06245 S yiaA/B two helix domain
POMDABJN_01335 0.0 uup S abc transporter atp-binding protein
POMDABJN_01336 2.1e-114 udk 2.7.1.48 F Cytidine monophosphokinase
POMDABJN_01337 2.1e-178 yfmL 3.6.4.13 L DEAD DEAH box helicase
POMDABJN_01338 2.1e-28 6.3.2.2, 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
POMDABJN_01339 8.6e-265 gapN 1.2.1.9 C Belongs to the aldehyde dehydrogenase family
POMDABJN_01340 1.6e-249 L Transposase
POMDABJN_01341 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
POMDABJN_01342 7.9e-39 ptsH G phosphocarrier protein Hpr
POMDABJN_01343 1.5e-222 icd 1.1.1.42 C Isocitrate dehydrogenase
POMDABJN_01344 5.1e-212 citZ 2.3.3.1 C Belongs to the citrate synthase family
POMDABJN_01345 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
POMDABJN_01346 2.2e-34 nrdH O Glutaredoxin
POMDABJN_01347 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
POMDABJN_01348 8.6e-184 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
POMDABJN_01350 4.2e-71 L Transposase (IS116 IS110 IS902 family)
POMDABJN_01351 8.8e-60 L Transposase (IS116 IS110 IS902 family)
POMDABJN_01352 5.3e-165 ypuA S secreted protein
POMDABJN_01353 1.4e-71 yaeR E COG0346 Lactoylglutathione lyase and related lyases
POMDABJN_01354 1.7e-134 srtA 3.4.22.70 M Sortase (surface protein transpeptidase)
POMDABJN_01355 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
POMDABJN_01356 1.1e-181 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
POMDABJN_01357 3.4e-258 noxE P NADH oxidase
POMDABJN_01358 1.9e-294 yfmM S abc transporter atp-binding protein
POMDABJN_01359 3.3e-82 XK27_01265 S ECF-type riboflavin transporter, S component
POMDABJN_01360 8.7e-85 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
POMDABJN_01361 4.5e-44 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
POMDABJN_01362 2e-86 S ECF-type riboflavin transporter, S component
POMDABJN_01364 5e-240 XK27_08130 K Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
POMDABJN_01365 2e-55 nrdD_1 1.1.98.6, 1.17.4.1 F Ribonucleoside-triphosphate reductase
POMDABJN_01368 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
POMDABJN_01369 4.6e-91 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
POMDABJN_01370 1.2e-196 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
POMDABJN_01371 0.0 smc D Required for chromosome condensation and partitioning
POMDABJN_01372 8.4e-125 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
POMDABJN_01373 6.6e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
POMDABJN_01374 1.1e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
POMDABJN_01375 6.1e-87 alkD L Dna alkylation repair
POMDABJN_01376 2.4e-92 pat 2.3.1.183 M acetyltransferase
POMDABJN_01377 1.5e-12
POMDABJN_01378 3.1e-30
POMDABJN_01379 2.6e-277 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
POMDABJN_01380 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
POMDABJN_01381 3.1e-127 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 E hydrolase
POMDABJN_01382 1.2e-62 bioY S biotin transmembrane transporter activity
POMDABJN_01383 9.8e-88 proW P Binding-protein-dependent transport system inner membrane component
POMDABJN_01384 1.5e-138 proV E abc transporter atp-binding protein
POMDABJN_01385 7.4e-169 proX M ABC transporter, substrate-binding protein, QAT family
POMDABJN_01386 3e-111 proWZ P ABC transporter (Permease
POMDABJN_01387 1.2e-280 hutH 4.3.1.3 E Histidine ammonia-lyase
POMDABJN_01388 1.4e-133 S Protein of unknown function (DUF917)
POMDABJN_01389 1.2e-48 S Protein of unknown function (DUF917)
POMDABJN_01390 1.3e-309 hutU 4.2.1.49 E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
POMDABJN_01391 1.6e-59 sdaAB 4.3.1.17 E L-serine dehydratase
POMDABJN_01392 4.4e-101 desR K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
POMDABJN_01393 1.5e-192 desK 2.7.13.3 T Histidine kinase
POMDABJN_01394 1.4e-133 yvfS V ABC-2 type transporter
POMDABJN_01395 8.7e-159 XK27_09825 V abc transporter atp-binding protein
POMDABJN_01399 6.6e-213 EGP Major facilitator Superfamily
POMDABJN_01400 9.3e-144 2.7.7.73, 2.7.7.80 E metalloendopeptidase activity
POMDABJN_01401 2.2e-287 2.7.7.73, 2.7.7.80 E metalloendopeptidase activity
POMDABJN_01402 4.6e-152 mutR K Transcriptional activator, Rgg GadR MutR family
POMDABJN_01403 4.6e-42 3.6.1.55 F NUDIX domain
POMDABJN_01404 1.4e-220 L Transposase
POMDABJN_01406 3.7e-122 S An automated process has identified a potential problem with this gene model
POMDABJN_01407 6.1e-26 XK27_09825 V 'abc transporter, ATP-binding protein
POMDABJN_01408 1.4e-15 liaI KT membrane
POMDABJN_01409 2.6e-30 liaI KT membrane
POMDABJN_01410 6.1e-93 XK27_05000 S metal cluster binding
POMDABJN_01411 0.0 V ABC transporter (permease)
POMDABJN_01412 1.9e-133 macB2 V ABC transporter, ATP-binding protein
POMDABJN_01413 6.2e-166 T Histidine kinase
POMDABJN_01414 4.6e-123 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
POMDABJN_01415 3.2e-78 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
POMDABJN_01417 2.1e-192 pbuX F xanthine permease
POMDABJN_01418 4.5e-247 norM V Multidrug efflux pump
POMDABJN_01419 2.2e-187 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
POMDABJN_01420 1.7e-235 brnQ E Component of the transport system for branched-chain amino acids
POMDABJN_01421 9.4e-65 manA 5.3.1.8 G mannose-6-phosphate isomerase
POMDABJN_01422 8.2e-57 manA 5.3.1.8 G mannose-6-phosphate isomerase
POMDABJN_01423 4.8e-25 csbD K CsbD-like
POMDABJN_01425 4e-227 yfnA E amino acid
POMDABJN_01426 5.1e-110 XK27_02070 S nitroreductase
POMDABJN_01427 3.5e-16 1.13.11.2 S glyoxalase
POMDABJN_01428 5e-96 1.13.11.2 S glyoxalase
POMDABJN_01429 1.1e-75 ywnA K Transcriptional regulator
POMDABJN_01430 8.6e-159 E Alpha/beta hydrolase of unknown function (DUF915)
POMDABJN_01431 1.9e-231 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
POMDABJN_01432 1.4e-110 drgA C Nitroreductase
POMDABJN_01433 6.6e-102 yoaK S Protein of unknown function (DUF1275)
POMDABJN_01434 1.5e-160 yvgN C reductase
POMDABJN_01435 2.7e-182 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
POMDABJN_01436 3.6e-282 XK27_07020 S Belongs to the UPF0371 family
POMDABJN_01438 1.1e-37 BP1961 P nitric oxide dioxygenase activity
POMDABJN_01439 1.4e-54 K response regulator
POMDABJN_01440 9.3e-72 S Signal peptide protein, YSIRK family
POMDABJN_01442 4.5e-61
POMDABJN_01443 1.8e-270 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
POMDABJN_01444 1e-137
POMDABJN_01445 5.3e-12 IQ PFAM AMP-dependent synthetase and ligase
POMDABJN_01446 2.7e-12 IQ PFAM AMP-dependent synthetase and ligase
POMDABJN_01447 5.8e-109 MA20_06410 E LysE type translocator
POMDABJN_01448 5.6e-08
POMDABJN_01449 2.7e-09
POMDABJN_01450 0.0 M family 8
POMDABJN_01452 5e-161 hrtB V MacB-like periplasmic core domain
POMDABJN_01453 1.1e-116 devA 3.6.3.25 V abc transporter atp-binding protein
POMDABJN_01454 1.1e-151 V MatE
POMDABJN_01456 3.9e-110 C Fe-S oxidoreductases
POMDABJN_01457 1.2e-176 EGP Major Facilitator Superfamily
POMDABJN_01458 5.5e-258 I radical SAM domain protein
POMDABJN_01460 6.5e-159 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
POMDABJN_01461 1.4e-150 L Integrase core domain protein
POMDABJN_01462 1.8e-87 L transposase activity
POMDABJN_01464 1.4e-84
POMDABJN_01465 0.0 sbcC L ATPase involved in DNA repair
POMDABJN_01466 1.3e-229 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
POMDABJN_01467 0.0 lacL 3.2.1.23 G -beta-galactosidase
POMDABJN_01468 0.0 lacS G transporter
POMDABJN_01469 2.4e-200 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
POMDABJN_01470 3.6e-193 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
POMDABJN_01471 1.3e-287 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
POMDABJN_01472 3.7e-221 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
POMDABJN_01473 2.3e-184 galR K Transcriptional regulator
POMDABJN_01474 2.7e-08 L Integrase core domain protein
POMDABJN_01475 1.2e-25 L transposition
POMDABJN_01476 3.5e-228 zmpB M M26 IgA1-specific Metallo-endopeptidase C-terminal region
POMDABJN_01477 5.1e-17 rtxA M M26 IgA1-specific Metallo-endopeptidase C-terminal region
POMDABJN_01478 2.5e-101 V abc transporter atp-binding protein
POMDABJN_01479 4.3e-40 V abc transporter atp-binding protein
POMDABJN_01480 0.0 gshF 6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
POMDABJN_01481 6.4e-62 L Transposase
POMDABJN_01482 7e-150 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
POMDABJN_01483 1.8e-33 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
POMDABJN_01484 1.7e-120 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
POMDABJN_01485 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
POMDABJN_01486 8.6e-187 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
POMDABJN_01487 1.9e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
POMDABJN_01488 5.8e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
POMDABJN_01491 8.2e-114 vraR K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
POMDABJN_01492 1.9e-173 vraS 2.7.13.3 T Histidine kinase
POMDABJN_01493 9.1e-119 yvqF KT membrane
POMDABJN_01494 1.7e-305 prkC 2.7.11.1 KLT serine threonine protein kinase
POMDABJN_01495 9e-133 stp 3.1.3.16 T phosphatase
POMDABJN_01496 1.7e-246 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
POMDABJN_01497 1e-173 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
POMDABJN_01498 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
POMDABJN_01499 2.7e-46 rpoZ 2.7.7.6 K DNA-directed 5'-3' RNA polymerase activity
POMDABJN_01500 2.6e-112 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
POMDABJN_01501 9.7e-213 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
POMDABJN_01502 1.8e-150 XK27_02985 S overlaps another CDS with the same product name
POMDABJN_01503 5.3e-147 supH S overlaps another CDS with the same product name
POMDABJN_01504 8.6e-63 yvoA_1 K Transcriptional
POMDABJN_01505 9.8e-121 skfE V abc transporter atp-binding protein
POMDABJN_01506 9e-131 V ATPase activity
POMDABJN_01507 4.3e-172 oppF P Belongs to the ABC transporter superfamily
POMDABJN_01508 2.2e-204 oppD P Belongs to the ABC transporter superfamily
POMDABJN_01509 2.4e-167 amiD P ABC transporter (Permease
POMDABJN_01510 1.1e-270 amiC P ABC transporter (Permease
POMDABJN_01511 0.0 amiA E ABC transporter, substrate-binding protein, family 5
POMDABJN_01512 8.1e-45 L Transposase
POMDABJN_01513 4.1e-158 L COG2801 Transposase and inactivated derivatives
POMDABJN_01514 1.2e-24 oppF P Belongs to the ABC transporter superfamily
POMDABJN_01515 5.5e-23 oppF P Belongs to the ABC transporter superfamily
POMDABJN_01516 2e-21 tatD L hydrolase, TatD family'
POMDABJN_01518 6.7e-218 oxlT P COG0477 Permeases of the major facilitator superfamily
POMDABJN_01519 4e-110 L PFAM Integrase catalytic region
POMDABJN_01520 9.3e-29 L transposition
POMDABJN_01521 1.4e-38 L transposase activity
POMDABJN_01522 3.7e-38 L transposase activity
POMDABJN_01523 1.4e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
POMDABJN_01524 9.8e-174 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
POMDABJN_01525 1.5e-152 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
POMDABJN_01526 1.5e-121 yjbM 2.7.6.5 S Gtp pyrophosphokinase
POMDABJN_01527 5.8e-103 yjbK S Adenylate cyclase
POMDABJN_01528 2.1e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
POMDABJN_01529 3.2e-206 iscS 2.8.1.7 E Cysteine desulfurase
POMDABJN_01530 9e-59 XK27_04120 S Putative amino acid metabolism
POMDABJN_01531 5.7e-118 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
POMDABJN_01532 1.6e-131 puuD T peptidase C26
POMDABJN_01533 6.2e-120 radC E Belongs to the UPF0758 family
POMDABJN_01534 0.0 rgpF M Rhamnan synthesis protein F
POMDABJN_01535 8.2e-196 rgpEc GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
POMDABJN_01536 8.7e-226 rgpD 3.6.3.38 P Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
POMDABJN_01537 1.1e-142 rgpC GM Transport permease protein
POMDABJN_01538 2.2e-179 rgpB GT2 M Glycosyltransferase, group 2 family protein
POMDABJN_01539 1.3e-226 rgpA GT4 M Domain of unknown function (DUF1972)
POMDABJN_01540 5.1e-195 tagF 2.7.8.12 M Glycosyl transferase, family 2
POMDABJN_01541 2.6e-220 amrA S polysaccharide biosynthetic process
POMDABJN_01542 5.3e-48 XK27_09090 S Uncharacterized conserved protein (DUF2304)
POMDABJN_01543 7.6e-126 ycbB S Glycosyl transferase family 2
POMDABJN_01544 1.2e-160 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
POMDABJN_01545 1.2e-231
POMDABJN_01546 1.6e-171 yfdH GT2 M COG0463, glycosyltransferases involved in cell wall biogenesis
POMDABJN_01547 5.4e-251 M Psort location CytoplasmicMembrane, score
POMDABJN_01548 3.4e-55 yitW K metal-sulfur cluster biosynthetic enzyme
POMDABJN_01549 8e-202 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
POMDABJN_01550 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
POMDABJN_01551 1.1e-46 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
POMDABJN_01552 1.2e-19 rpsU J Belongs to the bacterial ribosomal protein bS21 family
POMDABJN_01553 2.3e-134 gltS ET Belongs to the bacterial solute-binding protein 3 family
POMDABJN_01554 3.4e-200 arcT 2.6.1.1 E Aminotransferase
POMDABJN_01555 7.2e-136 ET ABC transporter
POMDABJN_01556 2.8e-143 ET Belongs to the bacterial solute-binding protein 3 family
POMDABJN_01557 2.9e-84 mutT 3.6.1.55 F Nudix family
POMDABJN_01558 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
POMDABJN_01559 5.5e-56 V CAAX protease self-immunity
POMDABJN_01560 2.4e-33 S CAAX amino terminal protease family protein
POMDABJN_01561 0.0 glnP P ABC-type amino acid transport signal transduction systems periplasmic component domain
POMDABJN_01562 6.7e-136 glnQ 3.6.3.21 E abc transporter atp-binding protein
POMDABJN_01563 1.1e-16 XK27_00735
POMDABJN_01564 1.4e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
POMDABJN_01566 1.6e-134 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
POMDABJN_01569 5.5e-65 paaI Q protein possibly involved in aromatic compounds catabolism
POMDABJN_01570 4e-50 ycaO O OsmC-like protein
POMDABJN_01571 1.1e-153 EG Permeases of the drug metabolite transporter (DMT) superfamily
POMDABJN_01573 1.6e-112 csn2 S CRISPR-associated protein (Cas_Csn2)
POMDABJN_01574 2.6e-55 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
POMDABJN_01575 1.5e-163 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
POMDABJN_01576 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
POMDABJN_01577 7.4e-115 serB 3.1.3.3 E phosphoserine phosphatase
POMDABJN_01578 2.8e-302 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
POMDABJN_01579 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
POMDABJN_01580 2.6e-109 3.1.3.18 S IA, variant 1
POMDABJN_01581 2.2e-117 lrgB M effector of murein hydrolase
POMDABJN_01582 2.2e-58 lrgA S Effector of murein hydrolase LrgA
POMDABJN_01584 5.4e-59 arsC 1.20.4.1 P Belongs to the ArsC family
POMDABJN_01585 1.5e-52 ogt 2.1.1.63, 3.2.2.20 L methylated-DNA-[protein]-cysteine S-methyltransferase activity
POMDABJN_01586 7e-220 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
POMDABJN_01587 3.9e-104 wecD M Acetyltransferase GNAT family
POMDABJN_01588 1.3e-209 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
POMDABJN_01589 2.6e-95 GK ROK family
POMDABJN_01590 8.1e-72 gloA 4.4.1.5 E Lactoylglutathione lyase
POMDABJN_01591 1.7e-47 XK27_08050 O stress-induced mitochondrial fusion
POMDABJN_01592 1.3e-19 XK27_08050 O HflC and HflK could regulate a protease
POMDABJN_01593 2.3e-206 potD P spermidine putrescine ABC transporter
POMDABJN_01594 3e-134 potC P ABC-type spermidine putrescine transport system, permease component II
POMDABJN_01595 3.7e-140 potB P ABC-type spermidine putrescine transport system, permease component I
POMDABJN_01596 6.2e-213 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
POMDABJN_01597 7.8e-171 murB 1.3.1.98 M cell wall formation
POMDABJN_01598 2.9e-87 folK 2.7.6.3, 4.1.2.25 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
POMDABJN_01599 1.2e-61 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
POMDABJN_01600 1.2e-298 amy 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
POMDABJN_01601 1.2e-146 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
POMDABJN_01602 1e-99 folE 3.5.4.16 F gtp cyclohydrolase
POMDABJN_01603 0.0 ydaO E amino acid
POMDABJN_01604 1.1e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
POMDABJN_01605 4.1e-37 ylqC L Belongs to the UPF0109 family
POMDABJN_01606 2.4e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
POMDABJN_01607 6.9e-172 tehB 2.1.1.265 PQ tellurite resistance protein tehb
POMDABJN_01608 8.2e-159 xth 3.1.11.2 L exodeoxyribonuclease III
POMDABJN_01609 2.1e-74 S QueT transporter
POMDABJN_01610 1.9e-55 L Transposase
POMDABJN_01611 5.7e-186 yegS 2.7.1.107 I Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
POMDABJN_01612 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
POMDABJN_01613 3.7e-85 ccl S cog cog4708
POMDABJN_01614 7.4e-164 rbn E Belongs to the UPF0761 family
POMDABJN_01615 1.5e-166 map 3.4.11.18 E Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed
POMDABJN_01616 3.3e-231 ytoI K transcriptional regulator containing CBS domains
POMDABJN_01617 2.4e-98 XK27_07830 2.3.1.128 J Acetyltransferase GNAT Family
POMDABJN_01618 1e-232 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
POMDABJN_01619 0.0 comEC S Competence protein ComEC
POMDABJN_01620 2.2e-96 comEA L COG1555 DNA uptake protein and related DNA-binding proteins
POMDABJN_01621 8.3e-142 plsC 2.3.1.51 I Acyltransferase
POMDABJN_01622 1.7e-77 nodB3 G polysaccharide deacetylase
POMDABJN_01623 4.1e-22 nodB3 G polysaccharide deacetylase
POMDABJN_01624 2.3e-139 yabB 2.1.1.223 L Methyltransferase
POMDABJN_01625 1e-41 yazA L endonuclease containing a URI domain
POMDABJN_01627 3.2e-252 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
POMDABJN_01628 2.3e-154 corA P CorA-like protein
POMDABJN_01629 1.9e-62 yjqA S Bacterial PH domain
POMDABJN_01630 7.8e-100 thiT S Thiamine transporter
POMDABJN_01631 2.1e-157 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
POMDABJN_01632 1.6e-200 yjbB G Permeases of the major facilitator superfamily
POMDABJN_01633 3.1e-300 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
POMDABJN_01634 7.9e-120 ywaF S Integral membrane protein (intg_mem_TP0381)
POMDABJN_01635 1.5e-258 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
POMDABJN_01639 1.1e-155 cjaA ET ABC transporter substrate-binding protein
POMDABJN_01640 1.7e-134 glnQ 3.6.3.21 E abc transporter atp-binding protein
POMDABJN_01641 3e-106 P ABC transporter (Permease
POMDABJN_01642 6e-115 papP P ABC transporter (Permease
POMDABJN_01643 1.7e-193 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
POMDABJN_01644 4.7e-31 copZ 2.7.7.77 P Heavy metal-associated domain protein
POMDABJN_01645 0.0 copA 3.6.3.54 P P-type ATPase
POMDABJN_01646 2.7e-73 copY K Copper transport repressor, CopY TcrY family
POMDABJN_01647 2.1e-143 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
POMDABJN_01648 2.1e-227 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
POMDABJN_01649 3e-99 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E belongs to the TrpF family
POMDABJN_01650 1.9e-133 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
POMDABJN_01651 1.5e-178 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
POMDABJN_01652 2.3e-104 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH anthranilate
POMDABJN_01653 1.5e-255 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
POMDABJN_01654 3.7e-42 pchB 2.5.1.19, 4.2.1.10, 4.2.99.21, 5.4.99.5 E Chorismate mutase
POMDABJN_01655 3.2e-56
POMDABJN_01656 0.0 ctpE P E1-E2 ATPase
POMDABJN_01657 3.9e-26
POMDABJN_01658 1.2e-43 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
POMDABJN_01659 5.1e-47 L transposase activity
POMDABJN_01660 5.3e-119 K transcriptional regulator, MerR family
POMDABJN_01661 1.3e-105 dnaQ 2.7.7.7 L DNA polymerase III
POMDABJN_01662 9.1e-42 WQ51_02910 S Protein of unknown function, DUF536
POMDABJN_01663 7.4e-64 XK27_02560 S cog cog2151
POMDABJN_01664 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
POMDABJN_01665 7.7e-227 ytfP S Flavoprotein
POMDABJN_01667 3.1e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
POMDABJN_01668 1.2e-151 ytmP 2.7.1.89 M Phosphotransferase
POMDABJN_01669 1.6e-183 ecsB U ABC transporter
POMDABJN_01670 2.3e-133 ecsA V abc transporter atp-binding protein
POMDABJN_01671 5e-72 hit FG Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
POMDABJN_01672 4.8e-11
POMDABJN_01673 6.5e-55
POMDABJN_01674 0.0 clpL O ATP-dependent Clp protease ATP-binding subunit
POMDABJN_01675 2.7e-202 ylbM S Belongs to the UPF0348 family
POMDABJN_01676 2e-140 yqeM Q Methyltransferase domain protein
POMDABJN_01677 6e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
POMDABJN_01678 1.4e-107 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
POMDABJN_01679 3.1e-118 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
POMDABJN_01680 3.5e-49 yhbY J RNA-binding protein
POMDABJN_01681 1.7e-215 yqeH S in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
POMDABJN_01682 1.8e-98 yqeG S hydrolase of the HAD superfamily
POMDABJN_01683 6.7e-154 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
POMDABJN_01684 4e-59
POMDABJN_01685 8.7e-273 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
POMDABJN_01686 1.6e-269 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
POMDABJN_01687 1.4e-47 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
POMDABJN_01688 9.8e-25 2.4.1.52 GT4 M transferase activity, transferring glycosyl groups
POMDABJN_01689 6.3e-31 M lipopolysaccharide 3-alpha-galactosyltransferase activity
POMDABJN_01690 1e-148 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
POMDABJN_01691 5.1e-77 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
POMDABJN_01692 3.6e-96 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
POMDABJN_01693 2.1e-154 hlpA M Belongs to the NlpA lipoprotein family
POMDABJN_01694 3.4e-100 pncA Q isochorismatase
POMDABJN_01695 1.2e-140 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
POMDABJN_01696 6.2e-240 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase
POMDABJN_01697 2.4e-75 XK27_03180 T universal stress protein
POMDABJN_01700 2e-157 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
POMDABJN_01701 2e-239 hlyX S COG1253 Hemolysins and related proteins containing CBS domains
POMDABJN_01702 2.4e-144 modF 3.6.3.21, 3.6.3.34 P abc transporter atp-binding protein
POMDABJN_01703 0.0 yjcE P NhaP-type Na H and K H antiporters
POMDABJN_01705 1.4e-98 ytqB 2.1.1.176 J (SAM)-dependent
POMDABJN_01706 1.3e-184 yhcC S radical SAM protein
POMDABJN_01707 8.4e-196 ylbL T Belongs to the peptidase S16 family
POMDABJN_01708 2e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
POMDABJN_01709 5.1e-93 rsmD 2.1.1.171 L Methyltransferase
POMDABJN_01710 1.9e-172 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
POMDABJN_01711 6.1e-08 S Protein of unknown function (DUF4059)
POMDABJN_01712 1.3e-131 tcyN 3.6.3.21 E abc transporter atp-binding protein
POMDABJN_01713 1.4e-159 yxeN P ABC transporter (Permease
POMDABJN_01714 8.8e-153 yxeM ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
POMDABJN_01716 1.3e-204 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
POMDABJN_01717 0.0 pflB 2.3.1.54 C formate acetyltransferase'
POMDABJN_01718 1.8e-147 cah 4.2.1.1 P carbonic anhydrase
POMDABJN_01719 2.1e-85 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
POMDABJN_01720 7.2e-46 hsdS_1 3.1.21.3 V type I restriction modification DNA specificity domain
POMDABJN_01721 2.1e-44 D nuclear chromosome segregation
POMDABJN_01722 1.4e-33 D nuclear chromosome segregation
POMDABJN_01723 1.5e-127 ybbM S transport system, permease component
POMDABJN_01724 4.4e-115 ybbL S abc transporter atp-binding protein
POMDABJN_01725 4.5e-185 ampC V COG1680 Beta-lactamase class C and other penicillin binding proteins
POMDABJN_01726 4.6e-140 cppA E CppA N-terminal
POMDABJN_01727 5e-44 V CAAX protease self-immunity
POMDABJN_01728 2.3e-164 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
POMDABJN_01729 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
POMDABJN_01732 3e-47 spiA K sequence-specific DNA binding
POMDABJN_01733 2.9e-28 blpT
POMDABJN_01734 6.7e-98 blpT
POMDABJN_01735 4.7e-117 L Transposase
POMDABJN_01736 1.2e-165 L integrase core domain
POMDABJN_01741 4.3e-25 S Bacteriocin class II with double-glycine leader peptide
POMDABJN_01744 4.4e-132 agrA KT phosphorelay signal transduction system
POMDABJN_01745 1.4e-237 blpH 2.7.13.3 T protein histidine kinase activity
POMDABJN_01747 4e-235 mesE M Transport protein ComB
POMDABJN_01748 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
POMDABJN_01749 0.0 mdlB V abc transporter atp-binding protein
POMDABJN_01750 0.0 mdlA V abc transporter atp-binding protein
POMDABJN_01752 1.7e-93 XK27_09885 V Glycopeptide antibiotics resistance protein
POMDABJN_01753 7.9e-224 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
POMDABJN_01754 2.4e-66 yutD J protein conserved in bacteria
POMDABJN_01755 4.8e-268 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
POMDABJN_01757 3e-90 L Transposase
POMDABJN_01758 7e-147 L Transposase
POMDABJN_01759 3.2e-221 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
POMDABJN_01760 6.3e-185 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
POMDABJN_01761 0.0 ftsI 3.4.16.4 M penicillin-binding protein
POMDABJN_01762 8.1e-46 ftsL D cell division protein FtsL
POMDABJN_01763 3.9e-173 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
POMDABJN_01764 2.2e-85
POMDABJN_01765 3.4e-58
POMDABJN_01766 2.8e-21 yhaI J Protein of unknown function (DUF805)
POMDABJN_01767 4.5e-18 D nuclear chromosome segregation
POMDABJN_01768 6.9e-210 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
POMDABJN_01769 4.4e-141 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
POMDABJN_01770 9.2e-284 XK27_00765
POMDABJN_01771 2.1e-129 ecsA_2 V abc transporter atp-binding protein
POMDABJN_01772 9.3e-122 S Protein of unknown function (DUF554)
POMDABJN_01773 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
POMDABJN_01774 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
POMDABJN_01775 3.4e-57 liaI S membrane
POMDABJN_01776 5.4e-10 XK27_02470 K LytTr DNA-binding domain protein
POMDABJN_01777 8.5e-68 KT response to antibiotic
POMDABJN_01778 3.5e-17 KT response to antibiotic
POMDABJN_01779 1.6e-79 yebC M Membrane
POMDABJN_01780 2.9e-18 yebC M Membrane
POMDABJN_01781 2.5e-261 XK27_03190 5.2.1.8 S hydrolases of the HAD superfamily
POMDABJN_01782 1.5e-172 ansA 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
POMDABJN_01783 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
POMDABJN_01784 1.5e-184 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
POMDABJN_01785 4.1e-62 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
POMDABJN_01786 1.1e-197 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
POMDABJN_01787 2.9e-198 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
POMDABJN_01788 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
POMDABJN_01790 3e-189 manA 5.3.1.8 G mannose-6-phosphate isomerase
POMDABJN_01791 4.1e-172 scrK 2.7.1.2, 2.7.1.4 GK Fructokinase
POMDABJN_01792 0.0 scrA 2.7.1.211 G pts system
POMDABJN_01793 4.1e-291 scrB 3.2.1.26 GH32 G invertase
POMDABJN_01794 1.7e-179 scrR K Transcriptional
POMDABJN_01795 2.1e-73 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
POMDABJN_01796 3.4e-62 yqhY S protein conserved in bacteria
POMDABJN_01797 9.3e-98 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
POMDABJN_01798 1.1e-83 comEB 3.5.4.12 F ComE operon protein 2
POMDABJN_01799 7.2e-192 pepP 3.4.11.9, 3.4.13.9 E Belongs to the peptidase M24B family
POMDABJN_01802 7.7e-11 V 'abc transporter, ATP-binding protein
POMDABJN_01803 1.1e-21 V 'abc transporter, ATP-binding protein
POMDABJN_01806 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
POMDABJN_01807 2e-169 corA P COG0598 Mg2 and Co2 transporters
POMDABJN_01808 3.1e-124 XK27_01040 S Pfam PF06570
POMDABJN_01810 9.7e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
POMDABJN_01811 2.7e-91 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
POMDABJN_01812 3.9e-47 rpsF J Binds together with S18 to 16S ribosomal RNA
POMDABJN_01813 3.6e-41 XK27_05745
POMDABJN_01814 2.5e-230 mutY L A G-specific adenine glycosylase
POMDABJN_01819 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
POMDABJN_01820 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
POMDABJN_01821 1e-93 cvpA S toxin biosynthetic process
POMDABJN_01822 2.3e-13 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
POMDABJN_01823 4.7e-160 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
POMDABJN_01824 1.3e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
POMDABJN_01825 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
POMDABJN_01826 8.8e-48 azlD E branched-chain amino acid
POMDABJN_01827 1.8e-114 azlC E AzlC protein
POMDABJN_01828 1.9e-186 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
POMDABJN_01829 1.3e-73 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
POMDABJN_01830 5.6e-121 yeaZ 2.3.1.234 O COG1214, inactive homolog of metal-dependent proteases
POMDABJN_01831 2.5e-33 ykzG S Belongs to the UPF0356 family
POMDABJN_01832 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
POMDABJN_01833 2.7e-40 pscB M CHAP domain protein
POMDABJN_01834 1.5e-263 glnA 6.3.1.2 E glutamine synthetase
POMDABJN_01835 8.5e-63 glnR K Transcriptional regulator
POMDABJN_01836 1.3e-87 S Fusaric acid resistance protein-like
POMDABJN_01837 1.5e-12
POMDABJN_01838 3.1e-30
POMDABJN_01839 2e-222 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
POMDABJN_01840 5.7e-43 L transposase activity
POMDABJN_01841 5e-17 L Transposase
POMDABJN_01842 1.1e-53 L transposition
POMDABJN_01843 2.9e-87 L Integrase core domain protein
POMDABJN_01844 1.8e-187 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
POMDABJN_01845 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
POMDABJN_01846 6.7e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
POMDABJN_01847 2.3e-69 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
POMDABJN_01848 5.3e-142 purR 2.4.2.7 F operon repressor
POMDABJN_01849 1.2e-177 cbf S 3'-5' exoribonuclease yhaM
POMDABJN_01850 6.9e-173 rmuC S RmuC domain protein
POMDABJN_01851 1.2e-117 thiN 2.7.6.2 H thiamine pyrophosphokinase
POMDABJN_01852 3e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
POMDABJN_01853 4.1e-161 rsgA 3.1.3.100 G One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
POMDABJN_01855 6.2e-157 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
POMDABJN_01856 1.1e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
POMDABJN_01857 1.6e-143 tatD L Hydrolase, tatd
POMDABJN_01858 1.1e-50 trxA O Belongs to the thioredoxin family
POMDABJN_01859 1.9e-141 S Macro domain protein
POMDABJN_01860 2e-09 L thioesterase
POMDABJN_01861 2.2e-54 bta 1.8.1.8 CO cell redox homeostasis
POMDABJN_01864 6.3e-226 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
POMDABJN_01865 1.1e-83 L Transposase
POMDABJN_01866 1e-13 rpmH J Ribosomal protein L34
POMDABJN_01867 2e-186 jag S RNA-binding protein
POMDABJN_01868 7.5e-141 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
POMDABJN_01869 5.9e-55 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
POMDABJN_01870 4.1e-264 argH 4.3.2.1 E Argininosuccinate lyase
POMDABJN_01871 2e-230 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
POMDABJN_01872 2.1e-282 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
POMDABJN_01873 6.7e-81 amiA E transmembrane transport
POMDABJN_01874 7.3e-69 amiA E transmembrane transport
POMDABJN_01875 4.8e-120 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
POMDABJN_01876 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
POMDABJN_01877 9.2e-51 S Protein of unknown function (DUF3397)
POMDABJN_01878 1.2e-165 L integrase core domain
POMDABJN_01879 4.7e-117 L Transposase
POMDABJN_01880 2e-88 cah 4.2.1.1 P Reversible hydration of carbon dioxide
POMDABJN_01881 7.3e-59 WQ51_05710 S Mitochondrial biogenesis AIM24
POMDABJN_01882 6.2e-12 WQ51_05710 S Mitochondrial biogenesis AIM24
POMDABJN_01883 1.4e-226 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
POMDABJN_01884 1.1e-80 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
POMDABJN_01885 4.7e-20 XK27_09620 S FMN reductase (NADPH) activity
POMDABJN_01886 6.2e-76 XK27_09620 S reductase
POMDABJN_01887 1.5e-220 XK27_09615 C reductase
POMDABJN_01888 2.5e-116 fnt P Formate nitrite transporter
POMDABJN_01889 1.3e-83 XK27_08585 S Psort location CytoplasmicMembrane, score
POMDABJN_01890 4.4e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
POMDABJN_01891 1.6e-168 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
POMDABJN_01892 7.5e-118 gluP 3.4.21.105 O membrane protein (homolog of Drosophila rhomboid)
POMDABJN_01893 8.5e-93 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
POMDABJN_01894 1.3e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
POMDABJN_01895 8.1e-59 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
POMDABJN_01896 1.9e-46 S glycolate biosynthetic process
POMDABJN_01897 1.5e-64 S phosphatase activity
POMDABJN_01898 4.1e-158 rrmA 2.1.1.187 Q methyltransferase
POMDABJN_01901 1e-90 tadA 3.5.4.1, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
POMDABJN_01902 5.1e-66 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
POMDABJN_01903 1.9e-36 yeeD O sulfur carrier activity
POMDABJN_01904 2e-109 yeeE S Sulphur transport
POMDABJN_01905 2.6e-68 yeeE S Sulphur transport
POMDABJN_01906 7.9e-114 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
POMDABJN_01907 2.1e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
POMDABJN_01908 4.1e-09 S Domain of unknown function (DUF4651)
POMDABJN_01909 2e-205 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
POMDABJN_01910 4.4e-130 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
POMDABJN_01911 1.8e-72 L Transposase
POMDABJN_01912 6.4e-165 L Transposase
POMDABJN_01913 8.7e-111 S CAAX amino terminal protease family protein
POMDABJN_01915 1.1e-66 V CAAX protease self-immunity
POMDABJN_01916 2.6e-26 lanR K sequence-specific DNA binding
POMDABJN_01917 8.3e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
POMDABJN_01918 1.5e-175 ytxK 2.1.1.72 L DNA methylase
POMDABJN_01919 5.2e-13 comGF U Putative Competence protein ComGF
POMDABJN_01920 1.3e-70 comGF U Competence protein ComGF
POMDABJN_01921 1.4e-15 NU Type II secretory pathway pseudopilin
POMDABJN_01922 1.8e-57 cglD NU Competence protein
POMDABJN_01923 8.5e-43 comGC U Required for transformation and DNA binding
POMDABJN_01924 8.8e-145 cglB NU type II secretion system
POMDABJN_01925 1.9e-175 comGA NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
POMDABJN_01926 2.9e-68 S cog cog4699
POMDABJN_01927 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
POMDABJN_01928 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
POMDABJN_01929 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
POMDABJN_01930 2.1e-238 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
POMDABJN_01931 1.5e-194 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
POMDABJN_01932 7.7e-77 ilvN 2.2.1.6 E Acetolactate synthase
POMDABJN_01933 0.0 ilvB 2.2.1.6 EH Acetolactate synthase
POMDABJN_01934 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
POMDABJN_01935 7.6e-305 yloV S kinase related to dihydroxyacetone kinase
POMDABJN_01936 1.8e-57 asp S cog cog1302
POMDABJN_01937 3.2e-226 norN V Mate efflux family protein
POMDABJN_01938 1.2e-277 thrC 4.2.3.1 E Threonine synthase
POMDABJN_01939 6.1e-64 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
POMDABJN_01940 4.1e-22 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
POMDABJN_01941 7.3e-74 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
POMDABJN_01942 1.2e-133 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
POMDABJN_01943 2.1e-52 adhE 1.1.1.1, 1.2.1.10 C Dehydrogenase
POMDABJN_01944 0.0 pepO 3.4.24.71 O Peptidase family M13
POMDABJN_01945 1.5e-69 treC 3.2.1.93 GH13 G COG0366 Glycosidases
POMDABJN_01946 5.9e-66 treC 3.2.1.93 GH13 G COG0366 Glycosidases
POMDABJN_01947 1.4e-54 treB 2.7.1.201 G PTS System
POMDABJN_01948 5.8e-21 treR K DNA-binding transcription factor activity
POMDABJN_01949 1.2e-85 treR K trehalose operon
POMDABJN_01950 3.3e-95 ywlG S Belongs to the UPF0340 family
POMDABJN_01953 2e-35 L PFAM Integrase, catalytic core
POMDABJN_01954 2e-94 L PFAM Integrase, catalytic core
POMDABJN_01955 3.3e-46 K Putative DNA-binding domain
POMDABJN_01956 2.5e-13 2.3.1.82 M Acetyltransferase GNAT Family
POMDABJN_01957 1.2e-126 gltT C Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
POMDABJN_01958 6.4e-136 HJ the current gene model (or a revised gene model) may contain a frame shift
POMDABJN_01963 1e-39
POMDABJN_01964 6.5e-31
POMDABJN_01965 5e-31 S Hypothetical protein (DUF2513)
POMDABJN_01966 7.7e-13
POMDABJN_01968 5.7e-217 S MvaI/BcnI restriction endonuclease family
POMDABJN_01970 2.2e-282 dcm 2.1.1.37 H C-5 cytosine-specific DNA methylase
POMDABJN_01971 9e-164 fba 4.1.2.13, 4.1.2.29 G aldolase
POMDABJN_01973 6.7e-110 6.3.2.2 H ergothioneine biosynthetic process
POMDABJN_01974 1.5e-65 6.3.2.2 H gamma-glutamylcysteine synthetase
POMDABJN_01975 3.2e-12 6.3.2.2 H gamma-glutamylcysteine synthetase
POMDABJN_01976 3.3e-09 L PFAM Integrase, catalytic core
POMDABJN_01977 1.8e-111 L PFAM Integrase, catalytic core
POMDABJN_01978 3.3e-62 rplQ J ribosomal protein l17
POMDABJN_01979 4.8e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
POMDABJN_01980 9.6e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
POMDABJN_01981 4e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
POMDABJN_01982 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
POMDABJN_01983 2.7e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
POMDABJN_01984 9.2e-121 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
POMDABJN_01985 2.1e-230 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
POMDABJN_01986 4.4e-58 rplO J binds to the 23S rRNA
POMDABJN_01987 2.5e-23 rpmD J ribosomal protein l30
POMDABJN_01988 1.7e-79 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
POMDABJN_01989 1.9e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
POMDABJN_01990 2.3e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
POMDABJN_01991 1.2e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
POMDABJN_01992 1.5e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
POMDABJN_01993 1.6e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
POMDABJN_01994 1.4e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
POMDABJN_01995 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
POMDABJN_01996 6e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
POMDABJN_01997 2.7e-26 rpmC J Belongs to the universal ribosomal protein uL29 family
POMDABJN_01998 7.2e-71 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
POMDABJN_01999 2.1e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
POMDABJN_02000 7.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
POMDABJN_02001 4.9e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
POMDABJN_02002 8.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
POMDABJN_02003 2.4e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
POMDABJN_02004 5.7e-104 rplD J Forms part of the polypeptide exit tunnel
POMDABJN_02005 1.1e-110 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
POMDABJN_02006 1.3e-48 rpsJ J Involved in the binding of tRNA to the ribosomes
POMDABJN_02007 7.8e-188 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
POMDABJN_02008 0.0 XK27_09800 I Acyltransferase
POMDABJN_02009 1.7e-35 XK27_09805 S MORN repeat protein
POMDABJN_02010 1.8e-80 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
POMDABJN_02011 4.1e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
POMDABJN_02012 1.8e-50 adk 2.7.4.3 F topology modulation protein
POMDABJN_02013 7.6e-130 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
POMDABJN_02014 9.7e-30 S Domain of unknown function (DUF4649)
POMDABJN_02015 2.4e-13 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
POMDABJN_02016 3.2e-56 Z012_04635 K sequence-specific DNA binding
POMDABJN_02017 1.4e-59 Z012_04635 K sequence-specific DNA binding
POMDABJN_02019 7.5e-109 C Radical SAM
POMDABJN_02020 3e-104 C Radical SAM
POMDABJN_02021 3.9e-287 V ABC transporter transmembrane region
POMDABJN_02022 5.9e-156 L Replication initiation factor
POMDABJN_02023 1.9e-18 S Domain of unknown function (DUF3173)
POMDABJN_02024 1.7e-215 int L Belongs to the 'phage' integrase family
POMDABJN_02026 5.2e-237 rarA L ATPase related to the helicase subunit of the Holliday junction resolvase
POMDABJN_02027 8.4e-27 rpmB J Belongs to the bacterial ribosomal protein bL28 family
POMDABJN_02028 2.8e-44 yrzL S Belongs to the UPF0297 family
POMDABJN_02029 1.2e-70 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
POMDABJN_02030 4.2e-44 yrzB S Belongs to the UPF0473 family
POMDABJN_02031 2.8e-299 ccs S the current gene model (or a revised gene model) may contain a frame shift
POMDABJN_02032 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
POMDABJN_02033 7.5e-14
POMDABJN_02034 2.6e-91 XK27_10930 K acetyltransferase
POMDABJN_02035 3.7e-116 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
POMDABJN_02036 1.8e-147 yaaA S Belongs to the UPF0246 family
POMDABJN_02037 9.3e-167 XK27_01785 S cog cog1284
POMDABJN_02038 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
POMDABJN_02040 1.6e-241 hisS 6.1.1.21 J histidyl-tRNA synthetase
POMDABJN_02041 1.4e-53 metE 2.1.1.14 E Methionine synthase
POMDABJN_02042 5.2e-55 metE 2.1.1.14 E Methionine synthase
POMDABJN_02043 1.4e-36 metE 2.1.1.14 E Methionine synthase
POMDABJN_02044 1e-24 rpmF J Belongs to the bacterial ribosomal protein bL32 family
POMDABJN_02045 6.7e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
POMDABJN_02046 2.4e-28
POMDABJN_02047 0.0 V Type II restriction enzyme, methylase subunits
POMDABJN_02048 3.2e-10 S Sigma-70, region 4
POMDABJN_02049 1.7e-35
POMDABJN_02050 1.5e-160 D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
POMDABJN_02051 2e-20
POMDABJN_02052 2.1e-82 S Plasmid replication protein
POMDABJN_02053 5.9e-20 S MerR HTH family regulatory protein
POMDABJN_02054 5.1e-184 sip L Belongs to the 'phage' integrase family
POMDABJN_02057 1.5e-49 yegS 2.7.1.107 I lipid kinase activity
POMDABJN_02058 2.7e-95 S Hydrophobic domain protein
POMDABJN_02060 3.7e-27 S Membrane
POMDABJN_02061 9.1e-101
POMDABJN_02062 1.8e-23 S Small integral membrane protein
POMDABJN_02063 3.1e-85 M Protein conserved in bacteria
POMDABJN_02064 1.1e-11 K CsbD-like
POMDABJN_02065 3.4e-13 nudL L hydrolase
POMDABJN_02066 4e-19 K negative regulation of transcription, DNA-templated
POMDABJN_02067 1.7e-23 K negative regulation of transcription, DNA-templated
POMDABJN_02069 1.8e-19 XK27_06920 S Protein of unknown function (DUF1700)
POMDABJN_02070 1.2e-87 S Putative adhesin
POMDABJN_02071 3.9e-161 XK27_06930 V domain protein
POMDABJN_02072 1.9e-95 XK27_06935 K transcriptional regulator
POMDABJN_02073 4.8e-55 ypaA M Membrane
POMDABJN_02074 2.7e-08
POMDABJN_02075 9.8e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
POMDABJN_02076 8.2e-48 veg S Biofilm formation stimulator VEG
POMDABJN_02077 1.5e-245 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
POMDABJN_02078 3.9e-70 rplI J binds to the 23S rRNA
POMDABJN_02079 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
POMDABJN_02080 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
POMDABJN_02081 1.5e-77 F NUDIX domain
POMDABJN_02082 5.6e-219 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
POMDABJN_02083 0.0 S Bacterial membrane protein, YfhO
POMDABJN_02084 1.7e-63 isaA GH23 M Immunodominant staphylococcal antigen A
POMDABJN_02085 5.3e-85 lytE M LysM domain protein
POMDABJN_02086 2e-138 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
POMDABJN_02087 2e-152 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
POMDABJN_02088 1.5e-152 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
POMDABJN_02089 3.1e-90 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
POMDABJN_02090 6.3e-138 ymfM S sequence-specific DNA binding
POMDABJN_02091 1.2e-241 ymfH S Peptidase M16
POMDABJN_02092 1.3e-156 ymfF S Peptidase M16
POMDABJN_02093 1.7e-66 ymfF S Peptidase M16
POMDABJN_02094 1.6e-45 yaaA S S4 domain protein YaaA
POMDABJN_02095 5.9e-205 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
POMDABJN_02096 4.3e-275 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
POMDABJN_02097 3.1e-192 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
POMDABJN_02098 4.2e-153 yvjA S membrane
POMDABJN_02099 6.7e-306 ybiT S abc transporter atp-binding protein
POMDABJN_02100 0.0 XK27_10405 S Bacterial membrane protein YfhO
POMDABJN_02104 6.2e-120 yoaK S Psort location CytoplasmicMembrane, score
POMDABJN_02105 1.1e-86 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
POMDABJN_02106 2.6e-193 htrA 3.4.21.107 O Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain'
POMDABJN_02107 8.5e-134 parB K Belongs to the ParB family
POMDABJN_02109 9.1e-143 3.1.21.4 L Recognizes the double-stranded unmethylated sequence GATC and cleaves before G-1
POMDABJN_02110 3.6e-96 dam 2.1.1.72 L Site-specific DNA-methyltransferase (Adenine-specific)
POMDABJN_02111 5.7e-132 L Replication protein
POMDABJN_02112 3e-53

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)