ORF_ID e_value Gene_name EC_number CAZy COGs Description
PBNCKJDM_00001 1.3e-137 L Transposase
PBNCKJDM_00002 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PBNCKJDM_00003 3.4e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PBNCKJDM_00004 5e-240 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PBNCKJDM_00005 1.3e-240 XK27_09285 3.5.2.6 V Beta-lactamase enzyme family
PBNCKJDM_00007 2.7e-61 divIC D Septum formation initiator
PBNCKJDM_00008 1.7e-39 yabO J Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
PBNCKJDM_00009 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PBNCKJDM_00010 1.4e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PBNCKJDM_00011 4.3e-203 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PBNCKJDM_00012 1.1e-29 yyzM S Protein conserved in bacteria
PBNCKJDM_00013 6.3e-202 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PBNCKJDM_00014 1.3e-257 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PBNCKJDM_00015 8.5e-134 parB K Belongs to the ParB family
PBNCKJDM_00016 1.1e-196 htrA 3.4.21.107 O Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain'
PBNCKJDM_00017 1.1e-86 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PBNCKJDM_00018 6.2e-120 yoaK S Psort location CytoplasmicMembrane, score
PBNCKJDM_00022 0.0 XK27_10405 S Bacterial membrane protein YfhO
PBNCKJDM_00023 3.3e-305 ybiT S abc transporter atp-binding protein
PBNCKJDM_00024 4.2e-153 yvjA S membrane
PBNCKJDM_00025 6.3e-193 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
PBNCKJDM_00026 4.3e-275 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PBNCKJDM_00027 5.9e-205 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PBNCKJDM_00028 2.4e-44 yaaA S S4 domain protein YaaA
PBNCKJDM_00029 3.1e-234 ymfF S Peptidase M16
PBNCKJDM_00030 3.1e-242 ymfH S Peptidase M16
PBNCKJDM_00031 6.3e-138 ymfM S sequence-specific DNA binding
PBNCKJDM_00032 3.1e-90 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PBNCKJDM_00033 1.5e-152 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PBNCKJDM_00034 5.2e-153 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PBNCKJDM_00035 1e-137 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PBNCKJDM_00036 1.7e-91 lytE M LysM domain protein
PBNCKJDM_00037 1.1e-62 isaA GH23 M Immunodominant staphylococcal antigen A
PBNCKJDM_00038 0.0 S Bacterial membrane protein, YfhO
PBNCKJDM_00039 8.6e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PBNCKJDM_00040 1.5e-77 F NUDIX domain
PBNCKJDM_00041 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PBNCKJDM_00042 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PBNCKJDM_00043 3.9e-70 rplI J binds to the 23S rRNA
PBNCKJDM_00044 1.5e-245 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PBNCKJDM_00045 8.2e-48 veg S Biofilm formation stimulator VEG
PBNCKJDM_00046 9.8e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PBNCKJDM_00047 2.7e-08
PBNCKJDM_00048 4.8e-55 ypaA M Membrane
PBNCKJDM_00049 6.4e-96 XK27_06935 K transcriptional regulator
PBNCKJDM_00050 3.9e-161 XK27_06930 V domain protein
PBNCKJDM_00051 1.8e-88 S Putative adhesin
PBNCKJDM_00052 4e-19 XK27_06920 S Protein of unknown function (DUF1700)
PBNCKJDM_00054 1.7e-23 K negative regulation of transcription, DNA-templated
PBNCKJDM_00055 4e-19 K negative regulation of transcription, DNA-templated
PBNCKJDM_00056 3.4e-13 nudL L hydrolase
PBNCKJDM_00057 1.1e-11 K CsbD-like
PBNCKJDM_00058 3.1e-85 M Protein conserved in bacteria
PBNCKJDM_00059 1.8e-23 S Small integral membrane protein
PBNCKJDM_00060 9.1e-101
PBNCKJDM_00061 1e-29 S Membrane
PBNCKJDM_00063 2.5e-96 S Hydrophobic domain protein
PBNCKJDM_00064 2.6e-49 yegS 2.7.1.107 I lipid kinase activity
PBNCKJDM_00067 5.1e-184 sip L Belongs to the 'phage' integrase family
PBNCKJDM_00068 2.7e-20 S MerR HTH family regulatory protein
PBNCKJDM_00069 2.8e-82 S Plasmid replication protein
PBNCKJDM_00070 1.5e-20
PBNCKJDM_00071 6.1e-162 D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
PBNCKJDM_00072 1.7e-35
PBNCKJDM_00073 3.6e-09 S Sigma-70, region 4
PBNCKJDM_00074 0.0 V Type II restriction enzyme, methylase subunits
PBNCKJDM_00075 8.3e-29
PBNCKJDM_00076 6.7e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PBNCKJDM_00077 1e-24 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PBNCKJDM_00078 1.4e-36 metE 2.1.1.14 E Methionine synthase
PBNCKJDM_00079 5.2e-55 metE 2.1.1.14 E Methionine synthase
PBNCKJDM_00080 1.4e-53 metE 2.1.1.14 E Methionine synthase
PBNCKJDM_00081 1.6e-241 hisS 6.1.1.21 J histidyl-tRNA synthetase
PBNCKJDM_00083 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PBNCKJDM_00084 9.3e-167 XK27_01785 S cog cog1284
PBNCKJDM_00085 7e-147 yaaA S Belongs to the UPF0246 family
PBNCKJDM_00086 3.7e-116 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PBNCKJDM_00087 1.7e-90 XK27_10930 K acetyltransferase
PBNCKJDM_00088 7.5e-14
PBNCKJDM_00089 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PBNCKJDM_00090 2.8e-299 ccs S the current gene model (or a revised gene model) may contain a frame shift
PBNCKJDM_00091 4.2e-44 yrzB S Belongs to the UPF0473 family
PBNCKJDM_00092 1.2e-70 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PBNCKJDM_00093 2.2e-44 yrzL S Belongs to the UPF0297 family
PBNCKJDM_00094 5.5e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PBNCKJDM_00095 7.5e-236 rarA L ATPase related to the helicase subunit of the Holliday junction resolvase
PBNCKJDM_00097 2.2e-132 int L Belongs to the 'phage' integrase family
PBNCKJDM_00098 2.5e-89 K sequence-specific DNA binding
PBNCKJDM_00099 5.1e-287 V ABC transporter transmembrane region
PBNCKJDM_00100 6.3e-159 C Radical SAM
PBNCKJDM_00101 3.6e-61 C Radical SAM
PBNCKJDM_00103 1.4e-59 Z012_04635 K sequence-specific DNA binding
PBNCKJDM_00104 3.2e-56 Z012_04635 K sequence-specific DNA binding
PBNCKJDM_00105 2.4e-13 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
PBNCKJDM_00106 9.7e-30 S Domain of unknown function (DUF4649)
PBNCKJDM_00107 6.9e-131 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PBNCKJDM_00108 2.4e-170 L Integrase
PBNCKJDM_00109 2.4e-75 XK27_03180 T universal stress protein
PBNCKJDM_00110 3.7e-240 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase
PBNCKJDM_00111 1.2e-140 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
PBNCKJDM_00112 6.8e-101 pncA Q isochorismatase
PBNCKJDM_00113 1.5e-124 hlpA M Belongs to the NlpA lipoprotein family
PBNCKJDM_00114 3.6e-96 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PBNCKJDM_00115 5.1e-77 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PBNCKJDM_00116 1e-148 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PBNCKJDM_00117 1.4e-47 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PBNCKJDM_00118 3.5e-269 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PBNCKJDM_00119 7.8e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PBNCKJDM_00120 1.2e-58
PBNCKJDM_00121 3.7e-152 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PBNCKJDM_00122 1.8e-98 yqeG S hydrolase of the HAD superfamily
PBNCKJDM_00123 1.7e-215 yqeH S in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
PBNCKJDM_00124 3.5e-49 yhbY J RNA-binding protein
PBNCKJDM_00125 3.1e-118 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PBNCKJDM_00126 1.4e-107 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
PBNCKJDM_00127 6e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PBNCKJDM_00128 2e-140 yqeM Q Methyltransferase domain protein
PBNCKJDM_00129 6.9e-206 ylbM S Belongs to the UPF0348 family
PBNCKJDM_00130 4.1e-15 L transposase activity
PBNCKJDM_00131 4.8e-229 L Transposase
PBNCKJDM_00132 0.0 clpL O ATP-dependent Clp protease ATP-binding subunit
PBNCKJDM_00133 1e-87 L Transposase
PBNCKJDM_00135 7.3e-107
PBNCKJDM_00136 2.6e-55 S CD20-like family
PBNCKJDM_00137 5.6e-12
PBNCKJDM_00138 3.9e-72 hit FG Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
PBNCKJDM_00139 2.3e-133 ecsA V abc transporter atp-binding protein
PBNCKJDM_00140 2.7e-183 ecsB U ABC transporter
PBNCKJDM_00141 1.2e-151 ytmP 2.7.1.89 M Phosphotransferase
PBNCKJDM_00142 3.1e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PBNCKJDM_00143 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
PBNCKJDM_00144 1.1e-40 XK27_02560 S cog cog2151
PBNCKJDM_00145 1.2e-41 WQ51_02910 S Protein of unknown function, DUF536
PBNCKJDM_00146 1.4e-104 dnaQ 2.7.7.7 L DNA polymerase III
PBNCKJDM_00147 2.7e-129 K transcriptional regulator, MerR family
PBNCKJDM_00148 9.7e-28 L transposase activity
PBNCKJDM_00149 1.2e-43 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PBNCKJDM_00150 3.9e-26
PBNCKJDM_00151 0.0 ctpE P E1-E2 ATPase
PBNCKJDM_00152 3.2e-56
PBNCKJDM_00153 3.7e-42 pchB 2.5.1.19, 4.2.1.10, 4.2.99.21, 5.4.99.5 E Chorismate mutase
PBNCKJDM_00154 2.8e-257 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PBNCKJDM_00155 8e-105 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH anthranilate
PBNCKJDM_00156 7.8e-180 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PBNCKJDM_00157 2.5e-133 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
PBNCKJDM_00158 3.3e-98 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E belongs to the TrpF family
PBNCKJDM_00159 1.1e-228 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PBNCKJDM_00160 2.1e-143 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PBNCKJDM_00161 2.7e-73 copY K Copper transport repressor, CopY TcrY family
PBNCKJDM_00162 0.0 copA 3.6.3.54 P P-type ATPase
PBNCKJDM_00163 4.7e-31 copZ 2.7.7.77 P Heavy metal-associated domain protein
PBNCKJDM_00164 1.7e-193 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PBNCKJDM_00165 6e-115 papP P ABC transporter (Permease
PBNCKJDM_00166 3e-106 P ABC transporter (Permease
PBNCKJDM_00167 7.6e-135 glnQ 3.6.3.21 E abc transporter atp-binding protein
PBNCKJDM_00168 1.1e-155 cjaA ET ABC transporter substrate-binding protein
PBNCKJDM_00172 1.5e-258 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PBNCKJDM_00173 1.4e-121 ywaF S Integral membrane protein (intg_mem_TP0381)
PBNCKJDM_00174 3.1e-300 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PBNCKJDM_00175 1.9e-201 yjbB G Permeases of the major facilitator superfamily
PBNCKJDM_00176 2.1e-157 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
PBNCKJDM_00177 7.8e-100 thiT S Thiamine transporter
PBNCKJDM_00178 1.9e-62 yjqA S Bacterial PH domain
PBNCKJDM_00179 2.3e-154 corA P CorA-like protein
PBNCKJDM_00180 3.2e-252 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PBNCKJDM_00181 1e-41 yazA L endonuclease containing a URI domain
PBNCKJDM_00182 2.3e-139 yabB 2.1.1.223 L Methyltransferase
PBNCKJDM_00183 4.1e-22 nodB3 G polysaccharide deacetylase
PBNCKJDM_00184 1.7e-77 nodB3 G polysaccharide deacetylase
PBNCKJDM_00185 1.3e-142 plsC 2.3.1.51 I Acyltransferase
PBNCKJDM_00186 2.2e-96 comEA L COG1555 DNA uptake protein and related DNA-binding proteins
PBNCKJDM_00187 0.0 comEC S Competence protein ComEC
PBNCKJDM_00188 1e-232 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PBNCKJDM_00189 7e-98 XK27_07830 2.3.1.128 J Acetyltransferase GNAT Family
PBNCKJDM_00190 3.6e-230 ytoI K transcriptional regulator containing CBS domains
PBNCKJDM_00191 2.1e-165 map 3.4.11.18 E Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed
PBNCKJDM_00192 7.4e-164 rbn E Belongs to the UPF0761 family
PBNCKJDM_00193 3.7e-85 ccl S cog cog4708
PBNCKJDM_00194 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PBNCKJDM_00195 5.7e-186 yegS 2.7.1.107 I Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
PBNCKJDM_00196 1.1e-89 ribD 1.1.1.193, 3.5.4.26 L Transposase DDE domain
PBNCKJDM_00197 2.5e-08 ribD 1.1.1.193, 3.5.4.26 L Transposase DDE domain
PBNCKJDM_00198 2.1e-74 S QueT transporter
PBNCKJDM_00199 2.6e-157 xth 3.1.11.2 L exodeoxyribonuclease III
PBNCKJDM_00200 6.9e-172 tehB 2.1.1.265 PQ tellurite resistance protein tehb
PBNCKJDM_00201 2.4e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PBNCKJDM_00202 4.1e-37 ylqC L Belongs to the UPF0109 family
PBNCKJDM_00203 5.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PBNCKJDM_00204 0.0 ydaO E amino acid
PBNCKJDM_00205 1e-99 folE 3.5.4.16 F gtp cyclohydrolase
PBNCKJDM_00206 7e-147 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PBNCKJDM_00207 3.5e-298 amy 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
PBNCKJDM_00208 1.2e-61 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PBNCKJDM_00209 2.9e-87 folK 2.7.6.3, 4.1.2.25 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
PBNCKJDM_00210 7.8e-171 murB 1.3.1.98 M cell wall formation
PBNCKJDM_00211 1.2e-213 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PBNCKJDM_00212 8.2e-140 potB P ABC-type spermidine putrescine transport system, permease component I
PBNCKJDM_00213 3e-134 potC P ABC-type spermidine putrescine transport system, permease component II
PBNCKJDM_00214 2.3e-206 potD P spermidine putrescine ABC transporter
PBNCKJDM_00215 1.3e-19 XK27_08050 O HflC and HflK could regulate a protease
PBNCKJDM_00216 1.7e-47 XK27_08050 O stress-induced mitochondrial fusion
PBNCKJDM_00217 8.1e-72 gloA 4.4.1.5 E Lactoylglutathione lyase
PBNCKJDM_00218 4.6e-115 GK ROK family
PBNCKJDM_00219 1.3e-209 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PBNCKJDM_00220 8.7e-104 wecD M Acetyltransferase GNAT family
PBNCKJDM_00221 7e-220 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PBNCKJDM_00222 6.3e-57 ogt 2.1.1.63, 3.2.2.20 L methylated-DNA-[protein]-cysteine S-methyltransferase activity
PBNCKJDM_00223 6.4e-60 arsC 1.20.4.1 P Belongs to the ArsC family
PBNCKJDM_00225 2e-56 lrgA S Effector of murein hydrolase LrgA
PBNCKJDM_00226 2.2e-117 lrgB M effector of murein hydrolase
PBNCKJDM_00227 2.6e-109 3.1.3.18 S IA, variant 1
PBNCKJDM_00228 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PBNCKJDM_00229 3.2e-298 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PBNCKJDM_00230 6.7e-116 serB 3.1.3.3 E phosphoserine phosphatase
PBNCKJDM_00231 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PBNCKJDM_00232 1.5e-163 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PBNCKJDM_00233 3.5e-52 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PBNCKJDM_00234 5.6e-110 csn2 S CRISPR-associated protein (Cas_Csn2)
PBNCKJDM_00236 1.7e-154 EG Permeases of the drug metabolite transporter (DMT) superfamily
PBNCKJDM_00238 6.6e-30 ycaO O OsmC-like protein
PBNCKJDM_00239 5.5e-65 paaI Q protein possibly involved in aromatic compounds catabolism
PBNCKJDM_00242 6.2e-134 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PBNCKJDM_00244 1.4e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PBNCKJDM_00245 1.1e-16 XK27_00735
PBNCKJDM_00246 1e-136 glnQ 3.6.3.21 E abc transporter atp-binding protein
PBNCKJDM_00247 0.0 glnP P ABC-type amino acid transport signal transduction systems periplasmic component domain
PBNCKJDM_00248 2.4e-33 S CAAX amino terminal protease family protein
PBNCKJDM_00249 4.3e-82 S CAAX amino terminal protease family protein
PBNCKJDM_00251 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PBNCKJDM_00252 2.9e-84 mutT 3.6.1.55 F Nudix family
PBNCKJDM_00253 3.7e-143 ET Belongs to the bacterial solute-binding protein 3 family
PBNCKJDM_00254 9.4e-136 ET ABC transporter
PBNCKJDM_00255 2.1e-202 arcT 2.6.1.1 E Aminotransferase
PBNCKJDM_00256 1.1e-136 gltS ET Belongs to the bacterial solute-binding protein 3 family
PBNCKJDM_00257 5.5e-20 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PBNCKJDM_00258 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PBNCKJDM_00259 1.1e-201 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PBNCKJDM_00260 3.4e-55 yitW K metal-sulfur cluster biosynthetic enzyme
PBNCKJDM_00261 1.4e-251 M Psort location CytoplasmicMembrane, score
PBNCKJDM_00262 1.6e-171 yfdH GT2 M COG0463, glycosyltransferases involved in cell wall biogenesis
PBNCKJDM_00263 3.2e-245
PBNCKJDM_00264 1.2e-160 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PBNCKJDM_00265 7.6e-126 ycbB S Glycosyl transferase family 2
PBNCKJDM_00266 5.3e-48 XK27_09090 S Uncharacterized conserved protein (DUF2304)
PBNCKJDM_00267 2.6e-220 amrA S polysaccharide biosynthetic process
PBNCKJDM_00268 5.1e-195 tagF 2.7.8.12 M Glycosyl transferase, family 2
PBNCKJDM_00269 1.3e-226 rgpA GT4 M Domain of unknown function (DUF1972)
PBNCKJDM_00270 2.2e-179 rgpB GT2 M Glycosyltransferase, group 2 family protein
PBNCKJDM_00271 2.8e-143 rgpC GM Transport permease protein
PBNCKJDM_00272 8.7e-226 rgpD 3.6.3.38 P Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PBNCKJDM_00273 8.2e-196 rgpEc GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
PBNCKJDM_00274 0.0 rgpF M Rhamnan synthesis protein F
PBNCKJDM_00275 2.4e-119 radC E Belongs to the UPF0758 family
PBNCKJDM_00276 2.7e-131 puuD T peptidase C26
PBNCKJDM_00277 1e-75 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PBNCKJDM_00278 1.2e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PBNCKJDM_00279 1.5e-103 yjbK S Adenylate cyclase
PBNCKJDM_00280 5.5e-121 yjbM 2.7.6.5 S Gtp pyrophosphokinase
PBNCKJDM_00281 5.4e-150 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PBNCKJDM_00282 9.8e-174 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PBNCKJDM_00283 1.4e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PBNCKJDM_00284 1.9e-23 L transposase activity
PBNCKJDM_00285 8.1e-45 L Transposase
PBNCKJDM_00286 0.0 amiA E ABC transporter, substrate-binding protein, family 5
PBNCKJDM_00287 2.1e-277 amiC P ABC transporter (Permease
PBNCKJDM_00288 4.9e-168 amiD P ABC transporter (Permease
PBNCKJDM_00289 2.2e-204 oppD P Belongs to the ABC transporter superfamily
PBNCKJDM_00290 1e-156 oppF P Belongs to the ABC transporter superfamily
PBNCKJDM_00291 2.6e-82 L EVIDENCE EXPERIMENTAL PMID 1328163 BIO14.04 Transposon related functions. BELONGS TO THE IS3 IS150 IS904 FAMILY OF TRANSPOSASE. There are 9 such elements in the chromosome
PBNCKJDM_00292 1.8e-59 L Integrase core domain protein
PBNCKJDM_00293 9.8e-214 oxlT P COG0477 Permeases of the major facilitator superfamily
PBNCKJDM_00294 1.4e-40 tatD L Hydrolase, tatd
PBNCKJDM_00295 7.7e-84 oppF P Belongs to the ABC transporter superfamily
PBNCKJDM_00296 3.3e-133 V ATPase activity
PBNCKJDM_00297 2.8e-120 skfE V abc transporter atp-binding protein
PBNCKJDM_00298 8.6e-63 yvoA_1 K Transcriptional
PBNCKJDM_00299 8.5e-145 supH S overlaps another CDS with the same product name
PBNCKJDM_00300 3.4e-149 XK27_02985 S overlaps another CDS with the same product name
PBNCKJDM_00301 2.8e-212 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PBNCKJDM_00302 9.8e-112 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
PBNCKJDM_00303 2.7e-46 rpoZ 2.7.7.6 K DNA-directed 5'-3' RNA polymerase activity
PBNCKJDM_00304 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PBNCKJDM_00305 3.5e-174 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PBNCKJDM_00306 4.4e-247 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PBNCKJDM_00307 2e-132 stp 3.1.3.16 T phosphatase
PBNCKJDM_00308 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
PBNCKJDM_00309 3.7e-120 yvqF KT membrane
PBNCKJDM_00310 5.8e-175 vraS 2.7.13.3 T Histidine kinase
PBNCKJDM_00312 5.8e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PBNCKJDM_00313 2.1e-134 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PBNCKJDM_00314 1.6e-188 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
PBNCKJDM_00315 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PBNCKJDM_00316 4.9e-120 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PBNCKJDM_00317 1.8e-33 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PBNCKJDM_00318 7e-150 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PBNCKJDM_00319 6.4e-62 L Transposase
PBNCKJDM_00320 0.0 gshF 6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
PBNCKJDM_00321 4.3e-40 V abc transporter atp-binding protein
PBNCKJDM_00322 2.5e-101 V abc transporter atp-binding protein
PBNCKJDM_00323 6.7e-17 rtxA M M26 IgA1-specific Metallo-endopeptidase C-terminal region
PBNCKJDM_00324 3.5e-228 zmpB M M26 IgA1-specific Metallo-endopeptidase C-terminal region
PBNCKJDM_00325 1.2e-25 L transposition
PBNCKJDM_00326 2.7e-08 L Integrase core domain protein
PBNCKJDM_00327 2.3e-184 galR K Transcriptional regulator
PBNCKJDM_00328 8.1e-221 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PBNCKJDM_00329 4e-289 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
PBNCKJDM_00330 6.6e-195 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PBNCKJDM_00331 6.4e-201 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PBNCKJDM_00332 0.0 lacS G transporter
PBNCKJDM_00333 0.0 lacL 3.2.1.23 G -beta-galactosidase
PBNCKJDM_00334 6.9e-231 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PBNCKJDM_00335 0.0 sbcC L ATPase involved in DNA repair
PBNCKJDM_00336 2.8e-85
PBNCKJDM_00338 1.8e-87 L transposase activity
PBNCKJDM_00339 2.9e-148 L Integrase core domain protein
PBNCKJDM_00340 6.5e-159 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
PBNCKJDM_00342 6.1e-257 I radical SAM domain protein
PBNCKJDM_00343 1.2e-176 EGP Major Facilitator Superfamily
PBNCKJDM_00344 3.9e-110 C Fe-S oxidoreductases
PBNCKJDM_00346 1.1e-151 V MatE
PBNCKJDM_00347 4.8e-117 devA 3.6.3.25 V abc transporter atp-binding protein
PBNCKJDM_00348 2.8e-164 hrtB V MacB-like periplasmic core domain
PBNCKJDM_00349 3.7e-112 L PFAM Integrase, catalytic core
PBNCKJDM_00350 3.3e-09 L PFAM Integrase, catalytic core
PBNCKJDM_00351 3.2e-12 6.3.2.2 H gamma-glutamylcysteine synthetase
PBNCKJDM_00352 8.1e-64 6.3.2.2 H gamma-glutamylcysteine synthetase
PBNCKJDM_00353 6.7e-110 6.3.2.2 H ergothioneine biosynthetic process
PBNCKJDM_00355 9e-164 fba 4.1.2.13, 4.1.2.29 G aldolase
PBNCKJDM_00356 2.2e-282 dcm 2.1.1.37 H C-5 cytosine-specific DNA methylase
PBNCKJDM_00358 5.7e-217 S MvaI/BcnI restriction endonuclease family
PBNCKJDM_00360 7.7e-13
PBNCKJDM_00361 5e-31 S Hypothetical protein (DUF2513)
PBNCKJDM_00362 6.5e-31
PBNCKJDM_00363 1e-39
PBNCKJDM_00368 6.4e-136 HJ the current gene model (or a revised gene model) may contain a frame shift
PBNCKJDM_00369 1.2e-126 gltT C Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PBNCKJDM_00370 2.5e-13 2.3.1.82 M Acetyltransferase GNAT Family
PBNCKJDM_00371 5e-30 K Putative DNA-binding domain
PBNCKJDM_00373 0.0 M family 8
PBNCKJDM_00374 2.7e-09
PBNCKJDM_00375 5.6e-08
PBNCKJDM_00376 5.8e-109 MA20_06410 E LysE type translocator
PBNCKJDM_00377 2.7e-12 IQ PFAM AMP-dependent synthetase and ligase
PBNCKJDM_00378 5.3e-12 IQ PFAM AMP-dependent synthetase and ligase
PBNCKJDM_00379 1e-137
PBNCKJDM_00380 1.8e-270 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PBNCKJDM_00381 4.5e-61
PBNCKJDM_00382 9.3e-72 S Signal peptide protein, YSIRK family
PBNCKJDM_00383 1.4e-54 K response regulator
PBNCKJDM_00384 1.1e-37 BP1961 P nitric oxide dioxygenase activity
PBNCKJDM_00386 3.6e-282 XK27_07020 S Belongs to the UPF0371 family
PBNCKJDM_00387 1.7e-179 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PBNCKJDM_00388 6.8e-161 yvgN C reductase
PBNCKJDM_00390 3e-102 yoaK S Protein of unknown function (DUF1275)
PBNCKJDM_00391 1.4e-110 drgA C Nitroreductase
PBNCKJDM_00392 5.6e-231 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PBNCKJDM_00393 8.6e-159 E Alpha/beta hydrolase of unknown function (DUF915)
PBNCKJDM_00394 4.7e-76 ywnA K Transcriptional regulator
PBNCKJDM_00395 9.5e-150 1.13.11.2 S glyoxalase
PBNCKJDM_00396 5.1e-110 XK27_02070 S nitroreductase
PBNCKJDM_00398 2.1e-71 ydhF S Aldo keto reductase
PBNCKJDM_00399 9.4e-68 ydhF S Aldo keto reductase
PBNCKJDM_00400 3.9e-82 K WHG domain
PBNCKJDM_00401 3.2e-91 V abc transporter atp-binding protein
PBNCKJDM_00402 5.9e-23 P FtsX-like permease family
PBNCKJDM_00403 2.4e-40 S Sugar efflux transporter for intercellular exchange
PBNCKJDM_00404 1.1e-83 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
PBNCKJDM_00405 8.1e-161 4.1.1.37 H Uroporphyrinogen decarboxylase (URO-D)
PBNCKJDM_00406 1.8e-161 ET ABC transporter substrate-binding protein
PBNCKJDM_00407 6.1e-107 ytmL P ABC transporter (Permease
PBNCKJDM_00408 3e-114 yxeN P ABC transporter, permease protein
PBNCKJDM_00409 6.9e-136 tcyC2 3.6.3.21 E abc transporter atp-binding protein
PBNCKJDM_00412 1.6e-21 L Integrase core domain protein
PBNCKJDM_00413 1.3e-140 S dextransucrase activity
PBNCKJDM_00414 4.9e-228 S dextransucrase activity
PBNCKJDM_00415 6.2e-228 yfnA E amino acid
PBNCKJDM_00417 9.6e-26 csbD K CsbD-like
PBNCKJDM_00418 8.2e-57 manA 5.3.1.8 G mannose-6-phosphate isomerase
PBNCKJDM_00419 9.4e-65 manA 5.3.1.8 G mannose-6-phosphate isomerase
PBNCKJDM_00420 5.6e-234 brnQ E Component of the transport system for branched-chain amino acids
PBNCKJDM_00421 6.7e-129 hipO E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
PBNCKJDM_00422 6.7e-35 hipO E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
PBNCKJDM_00423 3.2e-07 gldA 1.1.1.1, 1.1.1.6 C glycerol dehydrogenase
PBNCKJDM_00424 1.5e-78 gldA 1.1.1.1, 1.1.1.6 C glycerol dehydrogenase
PBNCKJDM_00425 5.6e-145 ykrV3 2.6.1.83 E mutations do not affect methionine salvage in vivo however
PBNCKJDM_00426 3e-115 yxeQ S MmgE/PrpD family
PBNCKJDM_00427 4.1e-58 yxeL K Acetyltransferase (GNAT) domain
PBNCKJDM_00428 4.1e-63 yxeN U ABC transporter, permease protein
PBNCKJDM_00429 7.3e-93 yxeO 3.6.3.21 E abc transporter atp-binding protein
PBNCKJDM_00430 2.9e-198 pcaB 4.3.2.2 F Adenylosuccinate lyase
PBNCKJDM_00431 3.5e-85 yxeM ET Belongs to the bacterial solute-binding protein 3 family
PBNCKJDM_00432 6.3e-187 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PBNCKJDM_00433 3.4e-247 norM V Multidrug efflux pump
PBNCKJDM_00434 4.6e-118 pbuX F xanthine permease
PBNCKJDM_00435 3.3e-69 pbuX F xanthine permease
PBNCKJDM_00436 2e-77 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PBNCKJDM_00437 4.6e-123 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PBNCKJDM_00438 6.2e-166 T Histidine kinase
PBNCKJDM_00439 1.9e-133 macB2 V ABC transporter, ATP-binding protein
PBNCKJDM_00440 0.0 V ABC transporter (permease)
PBNCKJDM_00441 6e-99 XK27_05000 S Fe-S-cluster oxidoreductase
PBNCKJDM_00442 2.6e-30 liaI KT membrane
PBNCKJDM_00443 2.7e-14 liaI KT membrane
PBNCKJDM_00444 1e-151 XK27_09825 V abc transporter atp-binding protein
PBNCKJDM_00445 1.7e-114 yvfS V Transporter
PBNCKJDM_00446 3.1e-83 cdd 2.4.2.4, 3.5.4.5 F cytidine deaminase activity
PBNCKJDM_00447 3.6e-163 yocS S Transporter
PBNCKJDM_00450 7.4e-158 XK27_09825 V abc transporter atp-binding protein
PBNCKJDM_00451 1.4e-133 yvfS V ABC-2 type transporter
PBNCKJDM_00452 1.5e-192 desK 2.7.13.3 T Histidine kinase
PBNCKJDM_00453 4.4e-101 desR K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PBNCKJDM_00454 3.6e-97 S transport system, permease component
PBNCKJDM_00455 3.5e-33 S transport system, permease component
PBNCKJDM_00456 1.1e-144 S ABC-2 family transporter protein
PBNCKJDM_00457 7.4e-26
PBNCKJDM_00458 8.4e-112 sdaAA 4.3.1.17 E L-serine dehydratase
PBNCKJDM_00459 6.6e-84 sdaAB 4.3.1.17 E L-serine dehydratase
PBNCKJDM_00460 5.1e-130 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 E hydrolase
PBNCKJDM_00461 8.9e-234 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PBNCKJDM_00462 5.7e-98 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PBNCKJDM_00463 2.4e-92 pat 2.3.1.183 M acetyltransferase
PBNCKJDM_00464 1.1e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PBNCKJDM_00465 6.6e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PBNCKJDM_00466 8.4e-125 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PBNCKJDM_00467 0.0 smc D Required for chromosome condensation and partitioning
PBNCKJDM_00468 9.6e-197 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PBNCKJDM_00469 2.9e-93 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PBNCKJDM_00470 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PBNCKJDM_00472 2e-55 nrdD_1 1.1.98.6, 1.17.4.1 F Ribonucleoside-triphosphate reductase
PBNCKJDM_00473 7.7e-241 XK27_08130 K Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PBNCKJDM_00475 2e-86 S ECF-type riboflavin transporter, S component
PBNCKJDM_00476 4.5e-44 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
PBNCKJDM_00477 8.7e-85 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
PBNCKJDM_00478 3.3e-82 XK27_01265 S ECF-type riboflavin transporter, S component
PBNCKJDM_00479 1.9e-294 yfmM S abc transporter atp-binding protein
PBNCKJDM_00480 3.4e-258 noxE P NADH oxidase
PBNCKJDM_00481 1.1e-181 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PBNCKJDM_00482 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PBNCKJDM_00483 2.1e-132 srtA 3.4.22.70 M Sortase (surface protein transpeptidase)
PBNCKJDM_00484 6.9e-165 ypuA S secreted protein
PBNCKJDM_00485 3.3e-26 L Transposase (IS116 IS110 IS902 family)
PBNCKJDM_00486 4.7e-70 L Transposase (IS116 IS110 IS902 family)
PBNCKJDM_00488 1.7e-184 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PBNCKJDM_00489 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PBNCKJDM_00490 2.2e-34 nrdH O Glutaredoxin
PBNCKJDM_00491 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PBNCKJDM_00492 5.1e-212 citZ 2.3.3.1 C Belongs to the citrate synthase family
PBNCKJDM_00493 3.9e-223 icd 1.1.1.42 C Isocitrate dehydrogenase
PBNCKJDM_00494 7.9e-39 ptsH G phosphocarrier protein Hpr
PBNCKJDM_00495 1.2e-156 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PBNCKJDM_00496 7.6e-135 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PBNCKJDM_00497 2.5e-242 gapN 1.2.1.9 C Belongs to the aldehyde dehydrogenase family
PBNCKJDM_00498 2.5e-176 yfmL 3.6.4.13 L DEAD DEAH box helicase
PBNCKJDM_00499 2.1e-114 udk 2.7.1.48 F Cytidine monophosphokinase
PBNCKJDM_00500 0.0 uup S abc transporter atp-binding protein
PBNCKJDM_00501 2.2e-131 pip 1.11.1.10 S Alpha beta hydrolase
PBNCKJDM_00502 0.0 mprF 2.3.2.3 J Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PBNCKJDM_00503 8.7e-150 cobQ S glutamine amidotransferase
PBNCKJDM_00504 7.5e-255 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain protein
PBNCKJDM_00505 5.6e-124 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PBNCKJDM_00506 6e-169 ybbR S Protein conserved in bacteria
PBNCKJDM_00507 1.6e-249 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PBNCKJDM_00508 1.7e-70 gtrA S GtrA-like protein
PBNCKJDM_00509 2.5e-121 trmK 2.1.1.217 S SAM-dependent methyltransferase
PBNCKJDM_00510 9.6e-149 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PBNCKJDM_00511 5.7e-102 zupT P Mediates zinc uptake. May also transport other divalent cations
PBNCKJDM_00512 1.1e-206 yurR 1.4.5.1 E oxidoreductase
PBNCKJDM_00513 1.9e-161 rfbA 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PBNCKJDM_00514 8.3e-113 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PBNCKJDM_00515 1.9e-205 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PBNCKJDM_00518 4.1e-217 hemN H Involved in the biosynthesis of porphyrin-containing compound
PBNCKJDM_00519 6.7e-144 fat 3.1.2.21 I Acyl-ACP thioesterase
PBNCKJDM_00520 5.9e-143 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PBNCKJDM_00521 5.3e-121 ylfI S tigr01906
PBNCKJDM_00522 2e-140 hisK 3.1.3.15 E Histidinol phosphatase and related hydrolases of the PHP family
PBNCKJDM_00523 2.3e-09 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
PBNCKJDM_00524 5.6e-92 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
PBNCKJDM_00525 1.3e-22 XK27_08085
PBNCKJDM_00526 4e-36 L Transposase
PBNCKJDM_00527 3.2e-89 L Transposase
PBNCKJDM_00528 4.1e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PBNCKJDM_00529 1e-80 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PBNCKJDM_00530 1.7e-35 XK27_09805 S MORN repeat protein
PBNCKJDM_00531 0.0 XK27_09800 I Acyltransferase
PBNCKJDM_00532 7.8e-188 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PBNCKJDM_00533 1.3e-48 rpsJ J Involved in the binding of tRNA to the ribosomes
PBNCKJDM_00534 1.1e-110 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PBNCKJDM_00535 5.7e-104 rplD J Forms part of the polypeptide exit tunnel
PBNCKJDM_00536 2.4e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PBNCKJDM_00537 8.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PBNCKJDM_00538 4.9e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PBNCKJDM_00539 7.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PBNCKJDM_00540 2.1e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PBNCKJDM_00541 7.2e-71 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PBNCKJDM_00542 2.7e-26 rpmC J Belongs to the universal ribosomal protein uL29 family
PBNCKJDM_00543 6e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PBNCKJDM_00544 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PBNCKJDM_00545 1.4e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PBNCKJDM_00546 1.6e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PBNCKJDM_00547 1.5e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PBNCKJDM_00548 1.2e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PBNCKJDM_00549 2.3e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PBNCKJDM_00550 1.9e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PBNCKJDM_00551 1.7e-79 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PBNCKJDM_00552 2.5e-23 rpmD J ribosomal protein l30
PBNCKJDM_00553 4.4e-58 rplO J binds to the 23S rRNA
PBNCKJDM_00554 2.1e-230 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PBNCKJDM_00555 9.2e-121 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PBNCKJDM_00556 2.7e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PBNCKJDM_00557 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PBNCKJDM_00558 4e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PBNCKJDM_00559 9.6e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PBNCKJDM_00560 4.8e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PBNCKJDM_00561 3.3e-62 rplQ J ribosomal protein l17
PBNCKJDM_00562 9.8e-94 L PFAM Integrase, catalytic core
PBNCKJDM_00563 2e-35 L PFAM Integrase, catalytic core
PBNCKJDM_00566 3.3e-95 ywlG S Belongs to the UPF0340 family
PBNCKJDM_00567 1.2e-85 treR K trehalose operon
PBNCKJDM_00568 5.8e-21 treR K DNA-binding transcription factor activity
PBNCKJDM_00569 1.4e-54 treB 2.7.1.201 G PTS System
PBNCKJDM_00570 5.9e-66 treC 3.2.1.93 GH13 G COG0366 Glycosidases
PBNCKJDM_00571 1.2e-69 treC 3.2.1.93 GH13 G COG0366 Glycosidases
PBNCKJDM_00572 1.8e-37 treC 3.2.1.93 GH13 G COG0366 Glycosidases
PBNCKJDM_00573 0.0 pepO 3.4.24.71 O Peptidase family M13
PBNCKJDM_00574 1.4e-63 adhE 1.1.1.1, 1.2.1.10 C Dehydrogenase
PBNCKJDM_00575 1.3e-135 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PBNCKJDM_00576 3.5e-76 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PBNCKJDM_00577 1.2e-35 adhE 1.1.1.1, 1.2.1.10 C hydroxyacid-oxoacid transhydrogenase activity
PBNCKJDM_00578 3.2e-65 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PBNCKJDM_00579 2.4e-278 thrC 4.2.3.1 E Threonine synthase
PBNCKJDM_00580 9.3e-226 norN V Mate efflux family protein
PBNCKJDM_00581 1.4e-57 asp S cog cog1302
PBNCKJDM_00582 6.4e-304 yloV S kinase related to dihydroxyacetone kinase
PBNCKJDM_00583 8.4e-09 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
PBNCKJDM_00584 2.6e-277 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
PBNCKJDM_00585 0.0 ilvB 2.2.1.6 EH Acetolactate synthase
PBNCKJDM_00586 7.7e-77 ilvN 2.2.1.6 E Acetolactate synthase
PBNCKJDM_00587 1.6e-196 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PBNCKJDM_00588 1.2e-238 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PBNCKJDM_00589 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PBNCKJDM_00590 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PBNCKJDM_00591 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PBNCKJDM_00592 2.9e-68 S cog cog4699
PBNCKJDM_00593 2.1e-07 comGA NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
PBNCKJDM_00594 4.6e-152 comGA NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
PBNCKJDM_00595 9.2e-153 cglB NU type II secretion system
PBNCKJDM_00596 8.5e-43 comGC U Required for transformation and DNA binding
PBNCKJDM_00597 1.8e-57 cglD NU Competence protein
PBNCKJDM_00598 1.4e-15 NU Type II secretory pathway pseudopilin
PBNCKJDM_00599 1.7e-70 comGF U Competence protein ComGF
PBNCKJDM_00600 1.2e-85 L Integrase core domain protein
PBNCKJDM_00602 2.1e-196 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PBNCKJDM_00603 5.7e-183 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PBNCKJDM_00604 2.3e-116 hisG 2.4.2.17 E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PBNCKJDM_00605 1.1e-234 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PBNCKJDM_00606 1.5e-106 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
PBNCKJDM_00607 1.2e-109 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PBNCKJDM_00608 5e-128 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PBNCKJDM_00609 1.9e-133 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PBNCKJDM_00610 5.5e-61 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PBNCKJDM_00611 4.5e-49 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
PBNCKJDM_00612 1.6e-239 rodA D Belongs to the SEDS family
PBNCKJDM_00613 7.1e-223 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PBNCKJDM_00614 5.5e-118 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
PBNCKJDM_00615 9.2e-175 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PBNCKJDM_00616 6.7e-139 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PBNCKJDM_00617 0.0 recJ L Single-strand DNA-specific exonuclease, C terminal domain
PBNCKJDM_00618 2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PBNCKJDM_00619 9.3e-183 metA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PBNCKJDM_00620 2.9e-125 dnaD
PBNCKJDM_00621 3.4e-120 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PBNCKJDM_00624 1.2e-247 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PBNCKJDM_00625 3.5e-29 xseB 3.1.11.6 L exodeoxyribonuclease VII activity
PBNCKJDM_00626 3e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PBNCKJDM_00627 5e-159 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PBNCKJDM_00628 1.8e-72 argR K Regulates arginine biosynthesis genes
PBNCKJDM_00629 5.8e-305 recN L May be involved in recombinational repair of damaged DNA
PBNCKJDM_00630 1e-148 DegV S DegV family
PBNCKJDM_00631 3.9e-143 ypmR E lipolytic protein G-D-S-L family
PBNCKJDM_00632 1.7e-83 ypmS S Protein conserved in bacteria
PBNCKJDM_00633 2.8e-39 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PBNCKJDM_00635 3.6e-179 pyrD 1.3.1.14, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate
PBNCKJDM_00636 4.6e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PBNCKJDM_00637 3.4e-291 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PBNCKJDM_00638 6.6e-190 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PBNCKJDM_00639 2.5e-43 ysdA L Membrane
PBNCKJDM_00640 1.2e-274 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PBNCKJDM_00641 3.1e-112 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PBNCKJDM_00642 1.4e-152 sua5 2.7.7.87 J Belongs to the SUA5 family
PBNCKJDM_00643 0.0 dnaE 2.7.7.7 L DNA polymerase
PBNCKJDM_00644 9.8e-130 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PBNCKJDM_00645 3.2e-09 Q the current gene model (or a revised gene model) may contain a frame shift
PBNCKJDM_00646 2.7e-26 Q the current gene model (or a revised gene model) may contain a frame shift
PBNCKJDM_00647 8.1e-42 Q the current gene model (or a revised gene model) may contain a frame shift
PBNCKJDM_00649 3.3e-178 XK27_08835 S ABC transporter substrate binding protein
PBNCKJDM_00650 5.2e-148 XK27_08840 S Belongs to the binding-protein-dependent transport system permease family
PBNCKJDM_00651 1.2e-135 XK27_08845 S abc transporter atp-binding protein
PBNCKJDM_00652 1.1e-308 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PBNCKJDM_00653 2e-151 estA CE1 S Putative esterase
PBNCKJDM_00654 4.7e-126 XK27_08875 O Zinc-dependent metalloprotease
PBNCKJDM_00655 5.5e-14 XK27_08880
PBNCKJDM_00656 2.3e-75 fld C Flavodoxin
PBNCKJDM_00657 1.3e-282 clcA P Chloride transporter, ClC family
PBNCKJDM_00658 8.7e-41 pheA 1.3.1.12, 2.3.1.79, 4.2.1.51, 5.4.99.5 E Chorismate mutase
PBNCKJDM_00659 2.1e-219 XK27_05110 P chloride
PBNCKJDM_00660 8.5e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PBNCKJDM_00663 2.1e-19 WQ51_02665 S Protein of unknown function (DUF3042)
PBNCKJDM_00664 4.9e-165 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PBNCKJDM_00665 1.6e-88 ytsP 1.8.4.14 T GAF domain-containing protein
PBNCKJDM_00666 3.2e-295 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PBNCKJDM_00667 4.2e-175 birA 6.3.4.15 HK Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PBNCKJDM_00668 2.1e-203 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PBNCKJDM_00669 5.9e-26 G Domain of unknown function (DUF4832)
PBNCKJDM_00670 2.7e-196 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PBNCKJDM_00672 3.5e-21 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PBNCKJDM_00673 1.2e-25 epuA S DNA-directed RNA polymerase subunit beta
PBNCKJDM_00674 8.9e-119 endA F DNA RNA non-specific endonuclease
PBNCKJDM_00675 1.7e-111 tcyB_2 P ABC transporter (permease)
PBNCKJDM_00676 5.9e-118 gltJ P ABC transporter (Permease
PBNCKJDM_00677 3.1e-150 peb1A ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
PBNCKJDM_00678 2.1e-140 glnQ 3.6.3.21 E abc transporter atp-binding protein
PBNCKJDM_00679 9.9e-129 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PBNCKJDM_00680 1.5e-247 vicK 2.7.13.3 T Histidine kinase
PBNCKJDM_00681 2.1e-154 vicX 3.1.26.11 S Metal-dependent hydrolases of the beta-lactamase superfamily I
PBNCKJDM_00682 9e-231 murM 2.3.2.10, 2.3.2.16 V protein involved in methicillin resistance
PBNCKJDM_00683 7.7e-100 yidA S hydrolases of the HAD superfamily
PBNCKJDM_00684 6.3e-51 XK27_00115 2.3.1.128 K acetyltransferase
PBNCKJDM_00685 2.6e-67 ywiB S Domain of unknown function (DUF1934)
PBNCKJDM_00686 2.1e-209 pacL 3.6.3.8 P cation transport ATPase
PBNCKJDM_00687 1.8e-81 pacL 3.6.3.8 P cation transport ATPase
PBNCKJDM_00688 5.2e-136 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PBNCKJDM_00689 4.3e-180 yjjH S Calcineurin-like phosphoesterase
PBNCKJDM_00690 2.7e-202 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PBNCKJDM_00691 1.6e-182 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PBNCKJDM_00692 2.5e-124 ftsE D cell division ATP-binding protein FtsE
PBNCKJDM_00693 3.6e-163 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
PBNCKJDM_00694 3.5e-93 mutX 3.6.1.55 F NTP pyrophosphohydrolases including oxidative damage repair enzymes
PBNCKJDM_00695 4e-175 yubA S permease
PBNCKJDM_00696 3.1e-223 G COG0457 FOG TPR repeat
PBNCKJDM_00697 4.2e-98 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PBNCKJDM_00698 1.8e-234 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PBNCKJDM_00699 2.9e-90 ebsA S Family of unknown function (DUF5322)
PBNCKJDM_00700 3.9e-15 M LysM domain
PBNCKJDM_00701 2.5e-121 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PBNCKJDM_00702 3.5e-86 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PBNCKJDM_00703 2.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PBNCKJDM_00704 1.5e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PBNCKJDM_00705 6.8e-23 L Transposase
PBNCKJDM_00706 1.7e-47 XK27_03610 K Gnat family
PBNCKJDM_00707 6.4e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PBNCKJDM_00708 2.4e-275 pepV 3.5.1.18 E Dipeptidase
PBNCKJDM_00709 1e-110 ung2 3.2.2.27 L Uracil-DNA glycosylase
PBNCKJDM_00710 1.7e-32 V Glucan-binding protein C
PBNCKJDM_00712 1.7e-122 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PBNCKJDM_00713 7.1e-236 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
PBNCKJDM_00714 1.3e-148 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
PBNCKJDM_00715 9.9e-119 clcA_2 P chloride
PBNCKJDM_00716 1e-09 yfeJ 6.3.5.2 F glutamine amidotransferase
PBNCKJDM_00717 4e-76 yfeJ 6.3.5.2 F glutamine amidotransferase
PBNCKJDM_00718 2.4e-130 deoD 2.4.2.1, 2.4.2.28 F purine nucleoside phosphorylase
PBNCKJDM_00719 2.1e-239 cps4A K Cell envelope-like function transcriptional attenuator common domain protein
PBNCKJDM_00720 2.5e-135 cpsB 3.1.3.48 GM Capsular polysaccharide biosynthesis protein
PBNCKJDM_00721 1.1e-103 cps4C M biosynthesis protein
PBNCKJDM_00722 9.4e-114 cpsD D COG0489 ATPases involved in chromosome partitioning
PBNCKJDM_00723 1.1e-221 cpsE M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
PBNCKJDM_00724 1.6e-103 rfbP 2.7.8.6 M Bacterial sugar transferase
PBNCKJDM_00725 6.3e-213 rgpAc GT4 M Domain of unknown function (DUF1972)
PBNCKJDM_00726 1.8e-92 lsgC M Glycosyl transferases group 1
PBNCKJDM_00727 8.1e-13 wzy P EpsG family
PBNCKJDM_00728 2.1e-55 M Glycosyltransferase like family 2
PBNCKJDM_00729 8.6e-241 cps1C S Polysaccharide biosynthesis protein
PBNCKJDM_00730 2.4e-46 tnp L DDE domain
PBNCKJDM_00731 2.6e-95 2.7.8.12 GT2 S Glycosyltransferase like family 2
PBNCKJDM_00732 1.7e-102 amiA E ABC transporter, substrate-binding protein, family 5
PBNCKJDM_00733 4.9e-193 L Transposase
PBNCKJDM_00734 5.1e-13 comGF U Putative Competence protein ComGF
PBNCKJDM_00735 5.9e-177 ytxK 2.1.1.72 L DNA methylase
PBNCKJDM_00736 2.9e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PBNCKJDM_00737 8.8e-27 lanR K sequence-specific DNA binding
PBNCKJDM_00738 5e-67 V CAAX protease self-immunity
PBNCKJDM_00740 3.9e-111 S CAAX amino terminal protease family protein
PBNCKJDM_00741 3.9e-131 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PBNCKJDM_00742 2e-205 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
PBNCKJDM_00743 4.1e-09 S Domain of unknown function (DUF4651)
PBNCKJDM_00744 4.2e-55 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PBNCKJDM_00745 7.9e-114 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PBNCKJDM_00746 1.8e-187 yeeE S Sulphur transport
PBNCKJDM_00747 6.4e-37 yeeD O sulfur carrier activity
PBNCKJDM_00748 5.1e-66 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PBNCKJDM_00749 2.7e-91 tadA 3.5.4.1, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PBNCKJDM_00751 2e-157 rrmA 2.1.1.187 Q methyltransferase
PBNCKJDM_00752 3.4e-64 S phosphatase activity
PBNCKJDM_00753 2.7e-48 S glycolate biosynthetic process
PBNCKJDM_00754 8.1e-59 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PBNCKJDM_00755 1.8e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PBNCKJDM_00756 9.1e-95 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PBNCKJDM_00757 5.2e-119 gluP 3.4.21.105 O membrane protein (homolog of Drosophila rhomboid)
PBNCKJDM_00758 6e-51 L Transposase
PBNCKJDM_00759 6.4e-94 V VanZ like family
PBNCKJDM_00760 2.3e-13 supH 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
PBNCKJDM_00761 6.6e-66 supH 3.1.3.102, 3.1.3.104 Q phosphatase activity
PBNCKJDM_00762 8.9e-87 G Belongs to the phosphoglycerate mutase family
PBNCKJDM_00763 1.3e-199 S hmm pf01594
PBNCKJDM_00764 1.8e-98 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PBNCKJDM_00765 3.8e-43 bglH 3.2.1.86 GT1 G beta-glucosidase activity
PBNCKJDM_00766 7.1e-36 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PBNCKJDM_00767 4.9e-39 S granule-associated protein
PBNCKJDM_00768 1.2e-291 S unusual protein kinase
PBNCKJDM_00769 2.6e-15 estA E Lysophospholipase L1 and related esterases
PBNCKJDM_00770 3.9e-78 estA E GDSL-like protein
PBNCKJDM_00771 1.1e-158 rssA S Phospholipase, patatin family
PBNCKJDM_00772 8.6e-218 yeaB K Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PBNCKJDM_00773 2.9e-127 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PBNCKJDM_00774 1.1e-234 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PBNCKJDM_00775 0.0 S the current gene model (or a revised gene model) may contain a frame shift
PBNCKJDM_00776 6e-185 acoA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
PBNCKJDM_00777 1.1e-181 acoB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PBNCKJDM_00778 1.8e-198 acoC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PBNCKJDM_00779 0.0 lpdA 1.8.1.4 C Dehydrogenase
PBNCKJDM_00780 2.6e-20 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
PBNCKJDM_00781 3.6e-82 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
PBNCKJDM_00782 8.5e-266 3.5.1.28 NU amidase activity
PBNCKJDM_00783 1.9e-37 3.5.1.28 NU amidase activity
PBNCKJDM_00784 2.4e-134 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PBNCKJDM_00785 6.1e-66 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PBNCKJDM_00786 1.1e-53 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PBNCKJDM_00787 2e-139 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PBNCKJDM_00788 4e-165 yclN P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PBNCKJDM_00789 1.9e-167 fatC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PBNCKJDM_00790 6.8e-136 yclP 3.6.3.34 P abc transporter atp-binding protein
PBNCKJDM_00791 2.2e-177 fatB P ABC-type enterochelin transport system, periplasmic component
PBNCKJDM_00792 2.1e-152 ycdO P periplasmic lipoprotein involved in iron transport
PBNCKJDM_00793 1.5e-233 ycdB P peroxidase
PBNCKJDM_00794 3e-301 ywbL P COG0672 High-affinity Fe2 Pb2 permease
PBNCKJDM_00795 1.3e-120 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PBNCKJDM_00796 4.6e-25 tatA U protein secretion
PBNCKJDM_00797 2.4e-111 malF P ABC transporter (Permease
PBNCKJDM_00798 1.9e-93 malX G ABC transporter
PBNCKJDM_00799 4.2e-17 malX G ABC transporter
PBNCKJDM_00800 4.2e-27 malR K Transcriptional regulator
PBNCKJDM_00801 2.4e-63 malR K Transcriptional regulator
PBNCKJDM_00802 6.4e-303 malQ 2.4.1.25 GH77 G 4-alpha-glucanotransferase
PBNCKJDM_00803 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PBNCKJDM_00804 3.7e-09
PBNCKJDM_00805 1.1e-17
PBNCKJDM_00806 1.3e-187 lplA 6.3.1.20 H Lipoate-protein ligase
PBNCKJDM_00807 7e-195 xerS D Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division
PBNCKJDM_00808 1.3e-87 pepN 3.4.11.2 E aminopeptidase
PBNCKJDM_00809 2.3e-26 pepN 3.4.11.2 E aminopeptidase
PBNCKJDM_00810 2.4e-113 phoU P Plays a role in the regulation of phosphate uptake
PBNCKJDM_00811 1.7e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PBNCKJDM_00812 5.2e-150 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PBNCKJDM_00813 1.2e-155 pstA P phosphate transport system permease
PBNCKJDM_00814 3.9e-154 pstC P probably responsible for the translocation of the substrate across the membrane
PBNCKJDM_00815 3.3e-158 pstS P phosphate
PBNCKJDM_00816 3e-256 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
PBNCKJDM_00817 5e-142 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
PBNCKJDM_00818 1.9e-43 yktA S Belongs to the UPF0223 family
PBNCKJDM_00819 1.4e-71 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PBNCKJDM_00820 2.6e-174 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PBNCKJDM_00821 2.4e-150 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PBNCKJDM_00822 5.2e-22 XK27_04775 P Hemerythrin HHE cation binding domain protein
PBNCKJDM_00823 3.6e-136 XK27_04775 S hemerythrin HHE cation binding domain
PBNCKJDM_00824 3.1e-110 hsdS2 2.1.1.72 V Type I restriction modification DNA specificity domain
PBNCKJDM_00825 3.5e-88 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PBNCKJDM_00826 9.3e-62 S haloacid dehalogenase-like hydrolase
PBNCKJDM_00827 1.8e-59 Q phosphatase activity
PBNCKJDM_00828 1.7e-240 metY 2.5.1.49 E o-acetylhomoserine
PBNCKJDM_00829 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PBNCKJDM_00830 1.8e-240 agcS E (Alanine) symporter
PBNCKJDM_00831 8.8e-232 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PBNCKJDM_00832 3.2e-35 yfiF3 K sequence-specific DNA binding
PBNCKJDM_00833 1.9e-13 yfiF3 K sequence-specific DNA binding
PBNCKJDM_00834 3.7e-60 sasH 3.1.3.5, 3.6.1.45 F Belongs to the 5'-nucleotidase family
PBNCKJDM_00835 1.8e-113 sasH 3.1.3.5, 3.6.1.45 F Belongs to the 5'-nucleotidase family
PBNCKJDM_00837 3.5e-68 yecS P ABC transporter (Permease
PBNCKJDM_00838 8.8e-134 yckB ET Belongs to the bacterial solute-binding protein 3 family
PBNCKJDM_00839 5e-103 nylA 3.5.1.4 J Belongs to the amidase family
PBNCKJDM_00840 1.5e-236 dtpT E transporter
PBNCKJDM_00842 7.8e-36 dtpT E transporter
PBNCKJDM_00844 3.6e-63 nylA 3.5.1.4 J Belongs to the amidase family
PBNCKJDM_00845 7.5e-112 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PBNCKJDM_00846 2.5e-77 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PBNCKJDM_00847 5.2e-74 csm6 S Psort location Cytoplasmic, score
PBNCKJDM_00848 2.1e-14 csm6 S Psort location Cytoplasmic, score
PBNCKJDM_00849 4.4e-205 csm5 L CRISPR-associated RAMP protein, Csm5 family
PBNCKJDM_00850 5.8e-166 csm4 L CRISPR-associated RAMP protein, Csm4 family
PBNCKJDM_00851 1.1e-116 csm3 L RAMP superfamily
PBNCKJDM_00852 5.6e-62 csm2 L Pfam:DUF310
PBNCKJDM_00853 0.0 csm1 S CRISPR-associated protein Csm1 family
PBNCKJDM_00854 6.8e-133 cas6 S Pfam:DUF2276
PBNCKJDM_00855 3.7e-54 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PBNCKJDM_00856 1.2e-180 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PBNCKJDM_00857 3.2e-175 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PBNCKJDM_00858 1.3e-148 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
PBNCKJDM_00859 1.3e-96 thiJ 2.7.11.1, 3.5.1.124 S DJ-1 family
PBNCKJDM_00860 5.7e-118 S TraX protein
PBNCKJDM_00862 3.7e-190
PBNCKJDM_00863 2.3e-309 FbpA K RNA-binding protein homologous to eukaryotic snRNP
PBNCKJDM_00865 4.8e-41 dinF V Mate efflux family protein
PBNCKJDM_00866 2.6e-54 dinF V Mate efflux family protein
PBNCKJDM_00867 3.3e-19 yclQ P ABC-type enterochelin transport system, periplasmic component
PBNCKJDM_00868 9.4e-15 yclQ P ABC-type enterochelin transport system, periplasmic component
PBNCKJDM_00869 4.1e-118 gph 3.1.3.18 S HAD hydrolase, family IA, variant 1
PBNCKJDM_00870 2.6e-143 2.4.2.3 F Phosphorylase superfamily
PBNCKJDM_00873 3.8e-78 S Alpha/beta hydrolase of unknown function (DUF915)
PBNCKJDM_00874 7.9e-17 S Alpha/beta hydrolase of unknown function (DUF915)
PBNCKJDM_00875 6e-08 S Hydrolases of the alpha beta superfamily
PBNCKJDM_00876 6.2e-196 adhB 1.1.1.1, 1.1.1.14 E Dehydrogenase
PBNCKJDM_00877 6.9e-189 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
PBNCKJDM_00878 1.8e-159 czcD P cation diffusion facilitator family transporter
PBNCKJDM_00879 9e-98 K Transcriptional regulator, TetR family
PBNCKJDM_00880 1.6e-10
PBNCKJDM_00881 2.8e-115 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PBNCKJDM_00882 3e-14 V ABC transporter (Permease
PBNCKJDM_00883 1.1e-121 L Transposase
PBNCKJDM_00884 1.2e-165 L integrase core domain
PBNCKJDM_00885 2.1e-30 rpsT J rRNA binding
PBNCKJDM_00886 1.1e-172 coaA 2.7.1.33 F Pantothenic acid kinase
PBNCKJDM_00887 7e-12 rsmC 2.1.1.172 J Methyltransferase small domain protein
PBNCKJDM_00888 5.1e-41 L Transposase
PBNCKJDM_00889 9.6e-13
PBNCKJDM_00890 3e-133 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
PBNCKJDM_00891 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
PBNCKJDM_00892 8.6e-61 EGP Major facilitator Superfamily
PBNCKJDM_00893 3.9e-136 speB 3.5.3.11 E hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
PBNCKJDM_00894 7.2e-212 pqqE C radical SAM domain protein
PBNCKJDM_00897 6.7e-156 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
PBNCKJDM_00898 6.4e-232 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PBNCKJDM_00899 3.9e-19 IQ Acetoin reductase
PBNCKJDM_00900 2.2e-49 IQ Acetoin reductase
PBNCKJDM_00901 1e-47 pspE P Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PBNCKJDM_00902 1.7e-75 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
PBNCKJDM_00903 7.5e-21 XK27_05470 E Methionine synthase
PBNCKJDM_00904 2.7e-151 XK27_05470 E Methionine synthase
PBNCKJDM_00905 6.6e-259 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PBNCKJDM_00906 4.3e-253 T PhoQ Sensor
PBNCKJDM_00907 2.2e-122 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PBNCKJDM_00908 5.1e-153 S TraX protein
PBNCKJDM_00909 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PBNCKJDM_00910 8.3e-159 dprA LU DNA protecting protein DprA
PBNCKJDM_00911 1.6e-166 GK ROK family
PBNCKJDM_00912 1.4e-136 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PBNCKJDM_00913 3.2e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PBNCKJDM_00914 8.1e-128 K DNA-binding helix-turn-helix protein
PBNCKJDM_00915 3e-90 niaR S small molecule binding protein (contains 3H domain)
PBNCKJDM_00916 3.1e-87 niaX
PBNCKJDM_00917 1.6e-272 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PBNCKJDM_00918 1.1e-53 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PBNCKJDM_00919 2e-126 gntR1 K transcriptional
PBNCKJDM_00920 1.1e-302 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PBNCKJDM_00921 0.0 sthIM 2.1.1.72 L Adenine specific DNA methylase Mod
PBNCKJDM_00922 0.0 res_1 3.1.21.5 S Type III restriction
PBNCKJDM_00923 1.1e-20
PBNCKJDM_00925 7.4e-110 adhP 1.1.1.1 C alcohol dehydrogenase
PBNCKJDM_00926 2.3e-62 adhP 1.1.1.1 C alcohol dehydrogenase
PBNCKJDM_00927 2.1e-07
PBNCKJDM_00928 7.3e-110 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PBNCKJDM_00929 2.4e-72 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PBNCKJDM_00930 2.1e-157 aatB ET ABC transporter substrate-binding protein
PBNCKJDM_00931 1.5e-112 glnQ 3.6.3.21 E abc transporter atp-binding protein
PBNCKJDM_00932 2.6e-104 artQ P ABC transporter (Permease
PBNCKJDM_00933 7.3e-58 phnA P Alkylphosphonate utilization operon protein PhnA
PBNCKJDM_00934 3e-218 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PBNCKJDM_00935 4.8e-94 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PBNCKJDM_00936 5.1e-34 cpsY K Transcriptional regulator
PBNCKJDM_00937 3.2e-83 L transposition
PBNCKJDM_00938 1.6e-118 mur1 NU muramidase
PBNCKJDM_00939 3.4e-18 yeiH S Membrane
PBNCKJDM_00940 3.3e-09 adcA P Belongs to the bacterial solute-binding protein 9 family
PBNCKJDM_00941 1.2e-46 XK27_10720 D peptidase activity
PBNCKJDM_00942 5.9e-79 hsdM 2.1.1.72 V HsdM N-terminal domain
PBNCKJDM_00943 1.8e-08 4.2.1.53 S Myosin-crossreactive antigen
PBNCKJDM_00944 1.8e-170 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PBNCKJDM_00945 4.4e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PBNCKJDM_00946 2.2e-27 XK27_08585 S Psort location CytoplasmicMembrane, score
PBNCKJDM_00947 1.2e-23 XK27_08585 S Psort location CytoplasmicMembrane, score
PBNCKJDM_00948 5.7e-35 fnt P Formate nitrite transporter
PBNCKJDM_00949 7.9e-72 fnt P Formate nitrite transporter
PBNCKJDM_00950 4.4e-140 XK27_09615 C reductase
PBNCKJDM_00951 9e-62 XK27_09615 C reductase
PBNCKJDM_00952 4.3e-77 XK27_09620 S reductase
PBNCKJDM_00953 4.7e-20 XK27_09620 S FMN reductase (NADPH) activity
PBNCKJDM_00954 1.1e-80 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
PBNCKJDM_00955 1.4e-226 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PBNCKJDM_00956 6.2e-12 WQ51_05710 S Mitochondrial biogenesis AIM24
PBNCKJDM_00957 7.3e-59 WQ51_05710 S Mitochondrial biogenesis AIM24
PBNCKJDM_00958 2e-88 cah 4.2.1.1 P Reversible hydration of carbon dioxide
PBNCKJDM_00959 3.5e-50 S Protein of unknown function (DUF3397)
PBNCKJDM_00960 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PBNCKJDM_00961 4.8e-120 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PBNCKJDM_00962 4.2e-74 amiA E transmembrane transport
PBNCKJDM_00963 2.2e-79 amiA E transmembrane transport
PBNCKJDM_00964 2.1e-282 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PBNCKJDM_00965 2e-230 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PBNCKJDM_00966 1.9e-264 argH 4.3.2.1 E Argininosuccinate lyase
PBNCKJDM_00967 1.2e-55 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PBNCKJDM_00968 1.7e-140 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PBNCKJDM_00969 5.5e-184 jag S RNA-binding protein
PBNCKJDM_00970 1e-13 rpmH J Ribosomal protein L34
PBNCKJDM_00971 5e-84 L Transposase
PBNCKJDM_00972 1.7e-226 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PBNCKJDM_00974 2.8e-97 copB 3.6.3.4 P P-type ATPase
PBNCKJDM_00975 8e-90 pepD E Dipeptidase
PBNCKJDM_00976 8.7e-162 whiA K May be required for sporulation
PBNCKJDM_00977 3.1e-181 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PBNCKJDM_00978 1.2e-163 rapZ S Displays ATPase and GTPase activities
PBNCKJDM_00979 2e-135 yejC S cyclic nucleotide-binding protein
PBNCKJDM_00980 2.2e-19 D nuclear chromosome segregation
PBNCKJDM_00981 1.9e-94 queF 1.7.1.13 S Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily
PBNCKJDM_00982 2.5e-135 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
PBNCKJDM_00983 5.7e-82 queD 4.1.2.50, 4.2.3.12 H synthase
PBNCKJDM_00984 9.8e-123 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
PBNCKJDM_00985 3e-63 tdcF 3.5.99.10 J endoribonuclease L-PSP
PBNCKJDM_00986 1.9e-46 L transposase activity
PBNCKJDM_00987 3.2e-42 L Transposase
PBNCKJDM_00988 2.2e-199 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PBNCKJDM_00989 1.1e-12
PBNCKJDM_00990 8.3e-78 T PhoQ Sensor
PBNCKJDM_00991 1.7e-43 T PhoQ Sensor
PBNCKJDM_00992 2.8e-40 T PhoQ Sensor
PBNCKJDM_00993 6.4e-66 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PBNCKJDM_00994 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PBNCKJDM_00995 1.2e-120 coaB 4.1.1.36, 6.3.2.5 H Phosphopantothenate-cysteine ligase
PBNCKJDM_00996 4.8e-94 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PBNCKJDM_00997 1.4e-93 panT S ECF transporter, substrate-specific component
PBNCKJDM_00998 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
PBNCKJDM_00999 7.3e-166 metF 1.5.1.20 E reductase
PBNCKJDM_01000 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PBNCKJDM_01002 3.8e-218 sip L Belongs to the 'phage' integrase family
PBNCKJDM_01003 1e-21 xre K transcriptional
PBNCKJDM_01004 1.8e-19 K Cro/C1-type HTH DNA-binding domain
PBNCKJDM_01008 1.4e-13
PBNCKJDM_01009 9e-22
PBNCKJDM_01010 1.8e-132 KL Phage plasmid primase P4 family
PBNCKJDM_01011 2.8e-66 S Virulence-associated protein E
PBNCKJDM_01013 5.9e-13
PBNCKJDM_01016 0.0 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH component I
PBNCKJDM_01017 0.0 3.6.3.8 P cation transport ATPase
PBNCKJDM_01018 9e-89 FNV0100 F Belongs to the Nudix hydrolase family
PBNCKJDM_01019 3.5e-28 3.4.13.21 I Protein conserved in bacteria
PBNCKJDM_01020 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PBNCKJDM_01021 1.8e-135 divIVA D Cell division protein DivIVA
PBNCKJDM_01022 4e-142 ylmH T S4 RNA-binding domain
PBNCKJDM_01023 4.4e-34 yggT D integral membrane protein
PBNCKJDM_01024 2e-87 sepF D cell septum assembly
PBNCKJDM_01025 6.6e-122 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PBNCKJDM_01026 5.4e-237 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PBNCKJDM_01027 4.4e-250 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PBNCKJDM_01028 8.2e-170 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PBNCKJDM_01029 1.3e-201 murG 2.4.1.227 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PBNCKJDM_01030 1.6e-252 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PBNCKJDM_01032 0.0 typA T GTP-binding protein TypA
PBNCKJDM_01033 2.2e-179 glk 2.7.1.2 G Glucokinase
PBNCKJDM_01034 8.4e-28 yqgQ S protein conserved in bacteria
PBNCKJDM_01035 1.2e-79 perR P Belongs to the Fur family
PBNCKJDM_01036 3.5e-91 dps P Belongs to the Dps family
PBNCKJDM_01037 4.4e-115 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
PBNCKJDM_01038 4.5e-188 3.5.2.6 V D-alanyl-D-alanine carboxypeptidase
PBNCKJDM_01039 2.5e-167 holA 2.7.7.7 L DNA polymerase III delta subunit
PBNCKJDM_01040 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PBNCKJDM_01041 6.2e-56 S Domain of unknown function (DUF4430)
PBNCKJDM_01042 5.1e-73 S Psort location CytoplasmicMembrane, score
PBNCKJDM_01043 1.8e-135 htpX O Belongs to the peptidase M48B family
PBNCKJDM_01044 1.5e-92 lemA S LemA family
PBNCKJDM_01045 8.8e-157 spd F DNA RNA non-specific endonuclease
PBNCKJDM_01046 3e-38
PBNCKJDM_01047 2.5e-44
PBNCKJDM_01049 9.3e-68 hsdS 3.1.21.3 L Type I restriction modification DNA specificity domain
PBNCKJDM_01050 7.3e-289 hsdM 2.1.1.72 V N-6 DNA Methylase
PBNCKJDM_01051 0.0 hsdR 3.1.21.3 V Type I restriction enzyme R protein N terminus (HSDR_N)
PBNCKJDM_01052 1.2e-21 MA20_36090 S Protein of unknown function (DUF2974)
PBNCKJDM_01053 1.6e-22 MA20_36090 S Protein of unknown function (DUF2974)
PBNCKJDM_01054 6.1e-114 1.14.14.5 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PBNCKJDM_01055 2.1e-27 P Hemerythrin HHE cation binding domain protein
PBNCKJDM_01056 4.5e-145 XK27_00880 3.5.1.28 M Glycosyl hydrolase, family 25
PBNCKJDM_01057 7.9e-82 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PBNCKJDM_01058 9.6e-115 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase
PBNCKJDM_01059 1.1e-10 S hydrolase
PBNCKJDM_01060 4.2e-152 S hydrolase
PBNCKJDM_01061 3.1e-20
PBNCKJDM_01063 2.8e-42 M LysM domain
PBNCKJDM_01064 5e-16 M LysM domain
PBNCKJDM_01065 9.9e-288 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PBNCKJDM_01066 2e-23
PBNCKJDM_01067 3.2e-167 S Domain of unknown function DUF87
PBNCKJDM_01068 2.1e-167 S SIR2-like domain
PBNCKJDM_01069 1.5e-28 S SIR2-like domain
PBNCKJDM_01070 4.1e-225 mutH L DNA mismatch repair enzyme MutH
PBNCKJDM_01071 6e-209 dcm 2.1.1.37 H C-5 cytosine-specific DNA methylase
PBNCKJDM_01072 5e-12
PBNCKJDM_01073 5.1e-235 mntH P H( )-stimulated, divalent metal cation uptake system
PBNCKJDM_01074 1.1e-33 XK27_12190 S protein conserved in bacteria
PBNCKJDM_01076 8.4e-88 bioY S biotin synthase
PBNCKJDM_01077 8.1e-46 S CHY zinc finger
PBNCKJDM_01078 3.4e-252 yegQ O Peptidase U32
PBNCKJDM_01079 2e-177 yegQ O Peptidase U32
PBNCKJDM_01081 5.5e-69 ytxH S General stress protein
PBNCKJDM_01083 4e-147 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PBNCKJDM_01084 1e-170 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PBNCKJDM_01085 9.9e-42 pspC KT PspC domain
PBNCKJDM_01087 7.1e-156 XK27_03015 S permease
PBNCKJDM_01088 7.8e-146 ycgQ S TIGR03943 family
PBNCKJDM_01089 2.6e-194 S CRISPR-associated protein Csn2 subfamily St
PBNCKJDM_01090 3.1e-53 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PBNCKJDM_01091 4.2e-172 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PBNCKJDM_01092 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PBNCKJDM_01093 1.4e-94
PBNCKJDM_01094 5.7e-34 estA E GDSL-like Lipase/Acylhydrolase
PBNCKJDM_01095 7.8e-50 dam 2.1.1.72 L D12 class N6 adenine-specific DNA methyltransferase
PBNCKJDM_01096 1e-31 K Cro/C1-type HTH DNA-binding domain
PBNCKJDM_01097 3.2e-46
PBNCKJDM_01098 8.9e-20
PBNCKJDM_01099 1.1e-256 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PBNCKJDM_01100 4.5e-97 mip S hydroperoxide reductase activity
PBNCKJDM_01101 2.4e-203 I acyl-CoA dehydrogenase
PBNCKJDM_01102 2.2e-149 ydiA P C4-dicarboxylate transporter malic acid transport protein
PBNCKJDM_01103 6.4e-252 msrR K Transcriptional regulator
PBNCKJDM_01104 6.7e-153 pheA 4.2.1.51 E Prephenate dehydratase
PBNCKJDM_01105 1.7e-87 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PBNCKJDM_01106 2.6e-236 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PBNCKJDM_01107 3e-173 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PBNCKJDM_01108 3.2e-53 yheA S Belongs to the UPF0342 family
PBNCKJDM_01109 2.2e-207 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
PBNCKJDM_01110 1.2e-205 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PBNCKJDM_01111 3.5e-202 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PBNCKJDM_01112 1.7e-162 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PBNCKJDM_01113 8.6e-122 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PBNCKJDM_01114 2e-219 ywbD 2.1.1.191 J Methyltransferase
PBNCKJDM_01115 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
PBNCKJDM_01116 2e-25 WQ51_00785
PBNCKJDM_01117 9.6e-247 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PBNCKJDM_01118 1e-78 yueI S Protein of unknown function (DUF1694)
PBNCKJDM_01119 1.3e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PBNCKJDM_01120 6.6e-101 yyaQ V Protein conserved in bacteria
PBNCKJDM_01121 2.8e-28 yyaQ S YjbR
PBNCKJDM_01122 4.4e-183 ccpA K Catabolite control protein A
PBNCKJDM_01123 4.2e-211 pepQ 3.4.13.9 E Belongs to the peptidase M24B family
PBNCKJDM_01124 1.7e-63 yugI 5.3.1.9 J RNA binding protein, contains ribosomal protein S1 domain
PBNCKJDM_01125 9.6e-277 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PBNCKJDM_01126 1.1e-80 smpB O the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PBNCKJDM_01127 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PBNCKJDM_01128 2.9e-32 secG U Preprotein translocase subunit SecG
PBNCKJDM_01129 3.6e-219 mdtG EGP Major facilitator Superfamily
PBNCKJDM_01130 1.4e-104 coaE 2.7.1.24, 3.2.2.23, 4.2.99.18 GH23 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PBNCKJDM_01131 1.9e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PBNCKJDM_01132 1.3e-165 era M An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PBNCKJDM_01133 1.1e-63 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
PBNCKJDM_01134 5.9e-88 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PBNCKJDM_01135 6.8e-53 licT K transcriptional antiterminator
PBNCKJDM_01136 5.8e-64 licT K transcriptional antiterminator
PBNCKJDM_01137 4.9e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PBNCKJDM_01138 0.0 pbp2b 3.4.16.4 M penicillin-binding protein
PBNCKJDM_01139 7.8e-149 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PBNCKJDM_01140 3.9e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PBNCKJDM_01141 7.5e-23 I Alpha/beta hydrolase family
PBNCKJDM_01142 1.5e-35 yugF I carboxylic ester hydrolase activity
PBNCKJDM_01143 2.2e-45 K sequence-specific DNA binding
PBNCKJDM_01144 2.4e-104 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PBNCKJDM_01145 1.5e-07
PBNCKJDM_01146 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
PBNCKJDM_01147 1.1e-78 feoA P FeoA domain protein
PBNCKJDM_01148 2.2e-131 glnQ 3.6.3.21 E abc transporter atp-binding protein
PBNCKJDM_01149 7.5e-118 WQ51_01820 P Binding-protein-dependent transport system inner membrane component
PBNCKJDM_01150 1.3e-34 ykuJ S protein conserved in bacteria
PBNCKJDM_01151 1.2e-180 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PBNCKJDM_01152 0.0 clpE O Belongs to the ClpA ClpB family
PBNCKJDM_01153 1.8e-86 mutT 3.5.4.33, 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
PBNCKJDM_01154 3.7e-48 XK27_09445 S Domain of unknown function (DUF1827)
PBNCKJDM_01155 9.7e-66 S oxidoreductase
PBNCKJDM_01156 9.3e-59 S oxidoreductase
PBNCKJDM_01157 1.3e-232 murN 2.3.2.10, 2.3.2.16 V FemAB family
PBNCKJDM_01158 6.1e-70 M Pfam SNARE associated Golgi protein
PBNCKJDM_01159 2.6e-101 S Domain of Unknown Function with PDB structure (DUF3862)
PBNCKJDM_01162 8.4e-205 rpsA 1.17.7.4 J ribosomal protein S1
PBNCKJDM_01165 4.8e-16 S Protein of unknown function (DUF2969)
PBNCKJDM_01166 2.4e-200 ilvE 2.6.1.42 E Aminotransferase
PBNCKJDM_01167 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PBNCKJDM_01168 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PBNCKJDM_01169 7.1e-102 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PBNCKJDM_01170 3.7e-15 L Helix-hairpin-helix DNA-binding motif class 1
PBNCKJDM_01171 1.4e-29 S Domain of unknown function (DUF1912)
PBNCKJDM_01172 4.5e-177 mmuM 1.5.1.20, 2.1.1.10 H Homocysteine
PBNCKJDM_01173 2.2e-249 mmuP E amino acid
PBNCKJDM_01174 3e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
PBNCKJDM_01175 2e-225 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PBNCKJDM_01176 9.7e-22
PBNCKJDM_01177 3.4e-91 folA 1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PBNCKJDM_01178 2.2e-167 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PBNCKJDM_01179 1.7e-218 mvaS 2.3.3.10 I synthase
PBNCKJDM_01180 2e-222 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PBNCKJDM_01181 1e-25 K hmm pf08876
PBNCKJDM_01182 1.5e-118 yqfA K protein, Hemolysin III
PBNCKJDM_01183 1.2e-22 S Protein of unknown function (DUF3114)
PBNCKJDM_01184 9.8e-163 S Protein of unknown function (DUF3114)
PBNCKJDM_01185 9.9e-169 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
PBNCKJDM_01186 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PBNCKJDM_01187 4.9e-21 XK27_13030
PBNCKJDM_01188 1.8e-248 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
PBNCKJDM_01189 1.4e-192 dgs 2.4.1.208 GT4 M Glycosyltransferase, group 1 family protein
PBNCKJDM_01190 1.1e-11 U protein secretion
PBNCKJDM_01191 2.1e-50 U protein secretion
PBNCKJDM_01192 3.5e-07 U protein secretion
PBNCKJDM_01194 5.9e-118 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PBNCKJDM_01195 2.5e-21
PBNCKJDM_01196 1e-96 nudF 3.6.1.13 L AdP-ribose pyrophosphatase
PBNCKJDM_01197 5.1e-254 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PBNCKJDM_01198 3.4e-191 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PBNCKJDM_01199 5e-179 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I GHMP kinases N terminal domain
PBNCKJDM_01200 1.3e-173 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PBNCKJDM_01201 1.8e-140 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
PBNCKJDM_01202 6.1e-105 GBS0088 J protein conserved in bacteria
PBNCKJDM_01203 5.7e-247 merA 1.16.1.1 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PBNCKJDM_01204 5.9e-47 ald 1.4.1.1 C Belongs to the AlaDH PNT family
PBNCKJDM_01205 3.4e-17 ald 1.4.1.1 E alanine dehydrogenase activity
PBNCKJDM_01206 4e-220 hipO 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
PBNCKJDM_01207 7.4e-132 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PBNCKJDM_01208 9.6e-113 S VIT family
PBNCKJDM_01209 1.8e-144 deoD_1 2.4.2.3 F Phosphorylase superfamily
PBNCKJDM_01210 1.9e-22
PBNCKJDM_01211 8e-28 XK27_00085 K Transcriptional
PBNCKJDM_01212 6.9e-197 yceA S Belongs to the UPF0176 family
PBNCKJDM_01213 5.4e-122 sagI S ABC-2 type transporter
PBNCKJDM_01214 2.8e-168 V ABC transporter
PBNCKJDM_01215 2.5e-219 2.7.7.73, 2.7.7.80 H Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
PBNCKJDM_01216 2.5e-132 rr02 KT response regulator
PBNCKJDM_01217 3.3e-215 2.7.13.3 T signal transduction protein with a C-terminal ATPase domain
PBNCKJDM_01218 2.6e-121 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PBNCKJDM_01219 6e-199 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PBNCKJDM_01220 1e-102 lmrA V abc transporter atp-binding protein
PBNCKJDM_01221 8.3e-191 lmrA V abc transporter atp-binding protein
PBNCKJDM_01222 0.0 mdlB V abc transporter atp-binding protein
PBNCKJDM_01224 1e-132 M domain protein
PBNCKJDM_01225 1.6e-18 L Integrase core domain
PBNCKJDM_01226 8e-112 L Transposase
PBNCKJDM_01227 5.9e-109 L Transposase
PBNCKJDM_01228 3.9e-52 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PBNCKJDM_01229 5.6e-78 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PBNCKJDM_01230 1.1e-24 ytrF V efflux transmembrane transporter activity
PBNCKJDM_01231 1.2e-35 V efflux transmembrane transporter activity
PBNCKJDM_01232 3.6e-35 V efflux transmembrane transporter activity
PBNCKJDM_01233 4.4e-30 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PBNCKJDM_01234 5.1e-14 L Transposase
PBNCKJDM_01235 0.0 carB 6.3.5.5 F carbamoyl-phosphate synthetase ammonia chain
PBNCKJDM_01236 1.1e-211 carA 6.3.5.5 F carbamoyl-phosphate synthetase glutamine chain
PBNCKJDM_01237 1e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PBNCKJDM_01238 4.9e-227 pyrP F uracil Permease
PBNCKJDM_01239 3.7e-88 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PBNCKJDM_01240 4.5e-163 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PBNCKJDM_01241 1.5e-77 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PBNCKJDM_01242 1.4e-167 fhuR K transcriptional regulator (lysR family)
PBNCKJDM_01247 3.2e-141 ppiA 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PBNCKJDM_01248 9.7e-77 2.7.1.199, 2.7.1.211 G PTS glucose transporter subunit IIA
PBNCKJDM_01249 2.5e-119 pts33BCA G pts system
PBNCKJDM_01250 1.7e-70 pts33BCA G pts system
PBNCKJDM_01251 2.4e-09 uvrX 2.7.7.7 L impB/mucB/samB family
PBNCKJDM_01252 1.8e-254 cycA E permease
PBNCKJDM_01253 4.5e-39 ynzC S UPF0291 protein
PBNCKJDM_01254 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PBNCKJDM_01255 4.8e-176 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PBNCKJDM_01256 6.1e-63 S membrane
PBNCKJDM_01257 1.5e-59
PBNCKJDM_01258 7.5e-26
PBNCKJDM_01259 1.8e-53
PBNCKJDM_01260 2.1e-221 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PBNCKJDM_01261 2.9e-68 nptA P sodium-dependent phosphate transmembrane transporter activity
PBNCKJDM_01262 2.2e-148 XK27_04800 S Sucrose-6F-phosphate phosphohydrolase
PBNCKJDM_01263 3.2e-105 mur1 NU mannosyl-glycoprotein
PBNCKJDM_01264 6.6e-54 glnB K Belongs to the P(II) protein family
PBNCKJDM_01265 5.8e-233 amt P Ammonium Transporter
PBNCKJDM_01266 2.7e-160 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PBNCKJDM_01267 9.5e-55 yabA L Involved in initiation control of chromosome replication
PBNCKJDM_01268 1.2e-135 yaaT S stage 0 sporulation protein
PBNCKJDM_01269 6.4e-162 holB 2.7.7.7 L dna polymerase iii
PBNCKJDM_01270 1.7e-111 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PBNCKJDM_01271 1.4e-136 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PBNCKJDM_01272 2.7e-219 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PBNCKJDM_01273 2.8e-230 ftsW D Belongs to the SEDS family
PBNCKJDM_01274 2e-66 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PBNCKJDM_01275 2.7e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PBNCKJDM_01276 2.5e-158 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PBNCKJDM_01277 3.8e-279 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PBNCKJDM_01278 3.5e-86 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PBNCKJDM_01279 3.3e-78 atpF C ATP synthase F(0) sector subunit b
PBNCKJDM_01280 3.1e-122 atpB C it plays a direct role in the translocation of protons across the membrane
PBNCKJDM_01281 3.2e-16 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PBNCKJDM_01282 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PBNCKJDM_01283 1.9e-46 2.3.1.128, 5.2.1.8 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PBNCKJDM_01284 1.1e-89 S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PBNCKJDM_01285 8.9e-14 coiA 3.6.4.12 S Competence protein
PBNCKJDM_01286 2.2e-15 T peptidase
PBNCKJDM_01287 3e-151 rarD S Transporter
PBNCKJDM_01288 1.1e-153 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PBNCKJDM_01289 1.8e-237 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
PBNCKJDM_01290 2.1e-128 yxkH G deacetylase
PBNCKJDM_01291 1.2e-208 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
PBNCKJDM_01292 1.3e-128 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
PBNCKJDM_01293 1.5e-222 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PBNCKJDM_01294 1.7e-190 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PBNCKJDM_01295 1.7e-226 mtnE 2.6.1.83 E mutations do not affect methionine salvage in vivo however
PBNCKJDM_01296 1.2e-146 cnhA 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
PBNCKJDM_01297 7.1e-89 3.4.17.14, 3.5.1.28 NU amidase activity
PBNCKJDM_01298 1.8e-30 3.4.17.14, 3.5.1.28 NU amidase activity
PBNCKJDM_01299 6.9e-179 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
PBNCKJDM_01300 7.9e-24 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
PBNCKJDM_01301 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PBNCKJDM_01302 1.1e-166 prsA 3.1.3.16, 5.2.1.8 O peptidyl-prolyl cis-trans isomerase activity
PBNCKJDM_01303 1.4e-127 yrrM 2.1.1.104 S O-Methyltransferase
PBNCKJDM_01304 0.0 pepF E oligoendopeptidase F
PBNCKJDM_01305 1.4e-186 coiA 3.6.4.12 S Competence protein
PBNCKJDM_01306 1.8e-164 K transcriptional regulator (lysR family)
PBNCKJDM_01307 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PBNCKJDM_01308 1.6e-249 L Transposase
PBNCKJDM_01309 2.1e-82 rsmC 2.1.1.172 J Methyltransferase small domain protein
PBNCKJDM_01310 1.2e-57 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
PBNCKJDM_01311 8.6e-97 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
PBNCKJDM_01312 1.4e-22 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PBNCKJDM_01313 3.7e-30 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PBNCKJDM_01314 1.3e-69 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PBNCKJDM_01315 3.6e-191 tcsA S ABC-type transport system, periplasmic component surface lipoprotein
PBNCKJDM_01316 3.7e-282 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
PBNCKJDM_01317 3e-190 yufP S Belongs to the binding-protein-dependent transport system permease family
PBNCKJDM_01318 4.8e-171 yufQ S Belongs to the binding-protein-dependent transport system permease family
PBNCKJDM_01319 1.2e-120 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
PBNCKJDM_01320 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PBNCKJDM_01321 6.8e-81 ypmB S Protein conserved in bacteria
PBNCKJDM_01322 1.6e-216 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
PBNCKJDM_01323 4.2e-261 asnS 6.1.1.22 J Catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
PBNCKJDM_01324 2.5e-15
PBNCKJDM_01325 6.8e-54 L Transposase
PBNCKJDM_01326 7.1e-32 L Transposase
PBNCKJDM_01327 1.3e-87 S Fusaric acid resistance protein-like
PBNCKJDM_01328 8.5e-63 glnR K Transcriptional regulator
PBNCKJDM_01329 1.5e-263 glnA 6.3.1.2 E glutamine synthetase
PBNCKJDM_01330 2.7e-40 pscB M CHAP domain protein
PBNCKJDM_01331 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PBNCKJDM_01332 2.5e-33 ykzG S Belongs to the UPF0356 family
PBNCKJDM_01333 5.6e-121 yeaZ 2.3.1.234 O COG1214, inactive homolog of metal-dependent proteases
PBNCKJDM_01334 4.8e-73 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PBNCKJDM_01335 1.9e-186 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PBNCKJDM_01336 1.8e-114 azlC E AzlC protein
PBNCKJDM_01337 2e-47 azlD E branched-chain amino acid
PBNCKJDM_01338 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PBNCKJDM_01339 1.3e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PBNCKJDM_01340 4.7e-160 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PBNCKJDM_01341 2.3e-13 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PBNCKJDM_01342 1e-93 cvpA S toxin biosynthetic process
PBNCKJDM_01343 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PBNCKJDM_01344 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PBNCKJDM_01349 4.2e-230 mutY L A G-specific adenine glycosylase
PBNCKJDM_01350 9.5e-42 XK27_05745
PBNCKJDM_01351 3.9e-47 rpsF J Binds together with S18 to 16S ribosomal RNA
PBNCKJDM_01352 2.7e-91 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PBNCKJDM_01353 9.7e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PBNCKJDM_01355 3.1e-124 XK27_01040 S Pfam PF06570
PBNCKJDM_01356 2e-169 corA P COG0598 Mg2 and Co2 transporters
PBNCKJDM_01357 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
PBNCKJDM_01360 1e-58 V 'abc transporter, ATP-binding protein
PBNCKJDM_01361 8e-44 V 'abc transporter, ATP-binding protein
PBNCKJDM_01363 5e-193 pepP 3.4.11.9, 3.4.13.9 E Belongs to the peptidase M24B family
PBNCKJDM_01364 3.7e-84 comEB 3.5.4.12 F ComE operon protein 2
PBNCKJDM_01365 1.2e-97 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PBNCKJDM_01366 3.4e-62 yqhY S protein conserved in bacteria
PBNCKJDM_01367 2.1e-73 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PBNCKJDM_01368 7.5e-180 scrR K Transcriptional
PBNCKJDM_01369 5.4e-291 scrB 3.2.1.26 GH32 G invertase
PBNCKJDM_01370 0.0 scrA 2.7.1.208, 2.7.1.211 G pts system
PBNCKJDM_01371 4.1e-172 scrK 2.7.1.2, 2.7.1.4 GK Fructokinase
PBNCKJDM_01372 6.7e-189 manA 5.3.1.8 G mannose-6-phosphate isomerase
PBNCKJDM_01374 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PBNCKJDM_01375 2.9e-198 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PBNCKJDM_01376 1.1e-197 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PBNCKJDM_01377 4.5e-61 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PBNCKJDM_01378 1.9e-182 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PBNCKJDM_01379 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PBNCKJDM_01380 1.8e-181 ansA 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
PBNCKJDM_01381 4.3e-261 XK27_03190 5.2.1.8 S hydrolases of the HAD superfamily
PBNCKJDM_01382 2.9e-18 yebC M Membrane
PBNCKJDM_01383 6.8e-81 yebC M Membrane
PBNCKJDM_01384 1.8e-65 KT response to antibiotic
PBNCKJDM_01385 5.2e-75 XK27_02470 K LytTr DNA-binding domain
PBNCKJDM_01386 2.6e-121 liaI S membrane
PBNCKJDM_01387 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
PBNCKJDM_01388 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PBNCKJDM_01389 5.2e-125 S Protein of unknown function (DUF554)
PBNCKJDM_01390 8.1e-134 ecsA_2 V abc transporter atp-binding protein
PBNCKJDM_01391 2.2e-285 XK27_00765
PBNCKJDM_01392 5.7e-141 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PBNCKJDM_01393 2e-225 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PBNCKJDM_01394 1.3e-08 D nuclear chromosome segregation
PBNCKJDM_01395 9.7e-32 yhaI J Protein of unknown function (DUF805)
PBNCKJDM_01396 3e-128
PBNCKJDM_01397 3.9e-173 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PBNCKJDM_01398 8.1e-46 ftsL D cell division protein FtsL
PBNCKJDM_01399 0.0 ftsI 3.4.16.4 M penicillin-binding protein
PBNCKJDM_01400 6.3e-185 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PBNCKJDM_01401 7.2e-221 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PBNCKJDM_01403 4.3e-269 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PBNCKJDM_01404 2.3e-72 yutD J protein conserved in bacteria
PBNCKJDM_01405 7.9e-224 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PBNCKJDM_01406 1.7e-93 XK27_09885 V Glycopeptide antibiotics resistance protein
PBNCKJDM_01408 0.0 mdlA V abc transporter atp-binding protein
PBNCKJDM_01409 0.0 mdlB V abc transporter atp-binding protein
PBNCKJDM_01410 2.8e-108 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PBNCKJDM_01411 9.3e-281 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PBNCKJDM_01412 1.6e-236 mesE M Transport protein ComB
PBNCKJDM_01414 9.9e-239 blpH 2.7.13.3 T protein histidine kinase activity
PBNCKJDM_01415 7.4e-135 agrA KT phosphorelay signal transduction system
PBNCKJDM_01419 4.3e-25 S Bacteriocin class II with double-glycine leader peptide
PBNCKJDM_01424 1.5e-152 ugd 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PBNCKJDM_01425 8.4e-205 nodC 2.4.1.212 GT2 M Chitin synthase
PBNCKJDM_01429 1e-190 phoH T phosphate starvation-inducible protein PhoH
PBNCKJDM_01430 8.7e-120 sip M LysM domain protein
PBNCKJDM_01431 7.4e-35 yozE S Belongs to the UPF0346 family
PBNCKJDM_01432 5.3e-161 cvfB S Protein conserved in bacteria
PBNCKJDM_01433 1.3e-91 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PBNCKJDM_01434 4.9e-131 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PBNCKJDM_01435 4.5e-77 sptS 2.7.13.3 T Histidine kinase
PBNCKJDM_01436 7.1e-37 K Acetyltransferase (GNAT) family
PBNCKJDM_01437 0.0 lmrA2 V abc transporter atp-binding protein
PBNCKJDM_01438 0.0 lmrA1 V abc transporter atp-binding protein
PBNCKJDM_01439 1.9e-77 K DNA-binding transcription factor activity
PBNCKJDM_01440 1e-69 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PBNCKJDM_01441 1.8e-256 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
PBNCKJDM_01442 1.7e-212 nadD 2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55 H adenylyltransferase
PBNCKJDM_01443 1.1e-141 3.6.1.13, 3.6.1.55 F AdP-ribose pyrophosphatase
PBNCKJDM_01444 1.6e-24 U response to pH
PBNCKJDM_01445 0.0 yfmR S abc transporter atp-binding protein
PBNCKJDM_01446 1.5e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PBNCKJDM_01447 1.9e-138 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PBNCKJDM_01448 3.6e-74 XK27_08360 S EDD domain protein, DegV family
PBNCKJDM_01449 1.9e-60 XK27_08360 S EDD domain protein, DegV family
PBNCKJDM_01450 2.3e-60 WQ51_03320 S cog cog4835
PBNCKJDM_01451 3e-122 ydaF_2 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PBNCKJDM_01452 1.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PBNCKJDM_01453 1.7e-48 rplU J This protein binds to 23S rRNA in the presence of protein L20
PBNCKJDM_01454 6.4e-29 2.3.1.128 K acetyltransferase
PBNCKJDM_01455 4.9e-39 2.3.1.128 K acetyltransferase
PBNCKJDM_01456 3e-256 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
PBNCKJDM_01457 1.4e-294 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
PBNCKJDM_01458 2.5e-228 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PBNCKJDM_01459 6.1e-213 iscS2 2.8.1.7 E Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes
PBNCKJDM_01461 3.4e-241 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PBNCKJDM_01462 3.2e-261 gor 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PBNCKJDM_01463 2.7e-102 fruA 2.7.1.202 G phosphotransferase system
PBNCKJDM_01464 2.3e-25 fruA 2.7.1.202 G phosphotransferase system
PBNCKJDM_01465 7.8e-22 fruA 2.7.1.202 GT PTS system, Lactose/Cellobiose specific IIB subunit
PBNCKJDM_01466 1.6e-78 fruA 2.7.1.202 GT PTS system, Lactose/Cellobiose specific IIB subunit
PBNCKJDM_01467 4.6e-163 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PBNCKJDM_01468 2.1e-113 fruR K transcriptional
PBNCKJDM_01469 1.8e-84 L Transposase
PBNCKJDM_01470 9.7e-56 L the current gene model (or a revised gene model) may contain a frame shift
PBNCKJDM_01471 6.4e-73 L Transposase
PBNCKJDM_01472 3.9e-28 rny D Endoribonuclease that initiates mRNA decay
PBNCKJDM_01473 9.2e-141 rny D Endoribonuclease that initiates mRNA decay
PBNCKJDM_01474 6.6e-38 L transposase activity
PBNCKJDM_01475 8.4e-155 L COG2801 Transposase and inactivated derivatives
PBNCKJDM_01476 1.1e-113 K sequence-specific DNA binding
PBNCKJDM_01477 6.4e-85 C Arylsulfatase regulator (Fe-S oxidoreductase)
PBNCKJDM_01478 1.4e-74 C Arylsulfatase regulator (Fe-S oxidoreductase)
PBNCKJDM_01479 7.7e-198 V (ABC) transporter
PBNCKJDM_01480 1.7e-51 2.3.1.128 K Acetyltransferase GNAT Family
PBNCKJDM_01481 8e-277 S Protein of unknown function (DUF3114)
PBNCKJDM_01483 3.4e-35 tnp L Transposase
PBNCKJDM_01484 1.3e-07 L Transposase and inactivated derivatives, TnpA family
PBNCKJDM_01485 4.4e-176 gadC E Psort location CytoplasmicMembrane, score 10.00
PBNCKJDM_01486 2.3e-214 gadB 4.1.1.15 E Belongs to the group II decarboxylase family
PBNCKJDM_01487 4.7e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PBNCKJDM_01488 1.1e-138 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
PBNCKJDM_01489 1.6e-160 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PBNCKJDM_01490 1.7e-257 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
PBNCKJDM_01491 1.5e-71 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PBNCKJDM_01492 7.7e-56 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PBNCKJDM_01493 2.6e-233 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PBNCKJDM_01494 1.6e-126 IQ reductase
PBNCKJDM_01495 8.5e-165 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
PBNCKJDM_01496 5.8e-172 fabK 1.3.1.9 S 2-Nitropropane dioxygenase
PBNCKJDM_01497 3.3e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PBNCKJDM_01498 2.3e-173 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PBNCKJDM_01499 4e-72 marR K Transcriptional regulator, MarR family
PBNCKJDM_01500 2.4e-139 phaB 5.3.3.14, 5.3.3.18 I Belongs to the enoyl-CoA hydratase isomerase family
PBNCKJDM_01501 1.9e-115 S Haloacid dehalogenase-like hydrolase
PBNCKJDM_01502 2.4e-256 lysC 2.7.2.4 E Belongs to the aspartokinase family
PBNCKJDM_01503 8e-193 asnA 6.3.1.1 E aspartate--ammonia ligase
PBNCKJDM_01504 6.7e-259 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PBNCKJDM_01505 1.2e-130 recX 2.4.1.337 GT4 S Regulatory protein RecX
PBNCKJDM_01506 7.8e-102 ygaC J Belongs to the UPF0374 family
PBNCKJDM_01507 6.4e-108 S Domain of unknown function (DUF1803)
PBNCKJDM_01508 2.1e-166 ppaC 3.6.1.1 C inorganic pyrophosphatase
PBNCKJDM_01515 1.7e-35 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PBNCKJDM_01516 4.6e-238 dltB M Membrane protein involved in D-alanine export
PBNCKJDM_01517 1.6e-296 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PBNCKJDM_01518 1.7e-09 S D-Ala-teichoic acid biosynthesis protein
PBNCKJDM_01519 0.0 XK27_10035 V abc transporter atp-binding protein
PBNCKJDM_01520 0.0 yfiB1 V abc transporter atp-binding protein
PBNCKJDM_01521 8e-100 pvaA M lytic transglycosylase activity
PBNCKJDM_01522 1.2e-177 ndpA S 37-kD nucleoid-associated bacterial protein
PBNCKJDM_01523 1.8e-234 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PBNCKJDM_01524 9.7e-109 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PBNCKJDM_01525 1.2e-154 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PBNCKJDM_01526 3e-193 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PBNCKJDM_01527 4.5e-111 tdk 2.7.1.21 F thymidine kinase
PBNCKJDM_01528 4.6e-188 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PBNCKJDM_01529 8.9e-155 gst O Glutathione S-transferase
PBNCKJDM_01530 1e-184 nrnA 3.1.13.3, 3.1.3.7 S domain protein
PBNCKJDM_01531 9.8e-177 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PBNCKJDM_01532 2e-45 rpmE2 J 50S ribosomal protein L31
PBNCKJDM_01533 5.5e-231 mntH P Mn2 and Fe2 transporters of the NRAMP family
PBNCKJDM_01534 8.4e-10
PBNCKJDM_01535 6.1e-114 L Transposase
PBNCKJDM_01536 1.4e-189 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PBNCKJDM_01537 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PBNCKJDM_01538 6.7e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PBNCKJDM_01539 2.3e-69 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PBNCKJDM_01540 1.1e-142 purR 2.4.2.7 F operon repressor
PBNCKJDM_01541 3.6e-179 cbf S 3'-5' exoribonuclease yhaM
PBNCKJDM_01542 6.9e-173 rmuC S RmuC domain protein
PBNCKJDM_01543 3.1e-118 thiN 2.7.6.2 H thiamine pyrophosphokinase
PBNCKJDM_01544 3e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PBNCKJDM_01545 2.6e-163 rsgA 3.1.3.100 G One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PBNCKJDM_01547 1.1e-156 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PBNCKJDM_01548 8.4e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PBNCKJDM_01549 4.1e-144 tatD L Hydrolase, tatd
PBNCKJDM_01550 2.5e-74 yccU S CoA-binding protein
PBNCKJDM_01551 4.8e-51 trxA O Belongs to the thioredoxin family
PBNCKJDM_01552 6.6e-142 S Macro domain protein
PBNCKJDM_01553 2e-09 L thioesterase
PBNCKJDM_01554 2.2e-54 bta 1.8.1.8 CO cell redox homeostasis
PBNCKJDM_01557 2.1e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PBNCKJDM_01558 1.7e-122 comFC S Competence protein
PBNCKJDM_01559 4.5e-252 comFA L Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
PBNCKJDM_01560 1.1e-110 yvyE 3.4.13.9 S YigZ family
PBNCKJDM_01561 3.7e-168 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PBNCKJDM_01562 8.9e-41 acuB S IMP dehydrogenase activity
PBNCKJDM_01563 6.8e-69 acuB S IMP dehydrogenase activity
PBNCKJDM_01564 4.8e-123 livF E COG0410 ABC-type branched-chain amino acid transport systems, ATPase component
PBNCKJDM_01565 9.6e-138 livG E COG0411 ABC-type branched-chain amino acid transport systems, ATPase component
PBNCKJDM_01566 1.6e-137 livM E Belongs to the binding-protein-dependent transport system permease family
PBNCKJDM_01567 1.9e-145 livH E Belongs to the binding-protein-dependent transport system permease family
PBNCKJDM_01568 1.8e-212 livJ E COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component
PBNCKJDM_01569 7.1e-46 ylbG S UPF0298 protein
PBNCKJDM_01570 1.2e-74 ylbF S Belongs to the UPF0342 family
PBNCKJDM_01571 2.9e-105 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PBNCKJDM_01572 4.4e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PBNCKJDM_01575 1e-223 malY 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PBNCKJDM_01576 4.7e-202 metB 2.5.1.48, 4.4.1.8 E cystathionine
PBNCKJDM_01577 3.3e-96 pacL 3.6.3.8, 3.6.3.9 P cation transport ATPase
PBNCKJDM_01578 4.5e-283 ytgP S Membrane protein involved in the export of O-antigen and teichoic acid
PBNCKJDM_01579 4.9e-276 murE 6.3.2.13, 6.3.2.7 M to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PBNCKJDM_01580 3.9e-156 femA 2.3.2.10, 2.3.2.16, 2.3.2.17, 2.3.2.18 V protein involved in methicillin resistance
PBNCKJDM_01581 8.7e-41 femA 2.3.2.10, 2.3.2.16, 2.3.2.17, 2.3.2.18 V protein involved in methicillin resistance
PBNCKJDM_01583 3.4e-37 yvdD 3.2.2.10 L Belongs to the LOG family
PBNCKJDM_01584 2e-22 yvdD 3.2.2.10 S Belongs to the LOG family
PBNCKJDM_01585 1.7e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PBNCKJDM_01586 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PBNCKJDM_01587 1.4e-41 ylxQ J ribosomal protein
PBNCKJDM_01588 1e-47 ylxR K Nucleic-acid-binding protein implicated in transcription termination
PBNCKJDM_01589 3.1e-212 nusA K Participates in both transcription termination and antitermination
PBNCKJDM_01590 3.9e-81 rimP S Required for maturation of 30S ribosomal subunits
PBNCKJDM_01591 2.8e-219 brpA K Transcriptional
PBNCKJDM_01592 3.2e-92 XK27_05885 2.3.1.82 M Acetyltransferase GNAT Family
PBNCKJDM_01593 1.4e-77 ydiB 2.7.1.221, 5.1.1.1 M ATPase or kinase
PBNCKJDM_01594 1.9e-248 pbuO S permease
PBNCKJDM_01595 1e-153 yitU 3.1.3.104 S hydrolases of the HAD superfamily
PBNCKJDM_01596 1.5e-140 XK27_00940 1.2.1.70, 3.5.1.9 S Metal-dependent hydrolase
PBNCKJDM_01597 1.1e-181 manL 2.7.1.191 G pts system
PBNCKJDM_01598 2.3e-116 manM G pts system
PBNCKJDM_01599 6.2e-168 manN G PTS system mannose fructose sorbose family IID component
PBNCKJDM_01600 4.2e-62 manO S protein conserved in bacteria
PBNCKJDM_01601 8.6e-232 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PBNCKJDM_01602 5.9e-37 L Transposase
PBNCKJDM_01603 1.3e-96 L Transposase, Mutator family
PBNCKJDM_01604 7.8e-28 L transposase activity
PBNCKJDM_01605 5.9e-51 M YSIRK type signal peptide
PBNCKJDM_01606 8.8e-92 S MucBP domain
PBNCKJDM_01609 3e-27 L Integrase core domain protein
PBNCKJDM_01610 1.2e-34
PBNCKJDM_01612 2.6e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PBNCKJDM_01613 4.4e-166 dnaI L Primosomal protein DnaI
PBNCKJDM_01614 6.5e-218 dnaB L Replication initiation and membrane attachment
PBNCKJDM_01615 4.7e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PBNCKJDM_01616 2.8e-282 T PhoQ Sensor
PBNCKJDM_01617 1.8e-122 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PBNCKJDM_01618 2.1e-91 yceD K metal-binding, possibly nucleic acid-binding protein
PBNCKJDM_01619 1.2e-129 rsmG 2.1.1.170 J Ribosomal RNA small subunit methyltransferase G
PBNCKJDM_01620 2.7e-244 P COG0168 Trk-type K transport systems, membrane components
PBNCKJDM_01621 1.4e-121 ktrA P COG0569 K transport systems, NAD-binding component
PBNCKJDM_01622 6.9e-11 ulaG S L-ascorbate 6-phosphate lactonase
PBNCKJDM_01623 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PBNCKJDM_01624 4.7e-146 cbiQ P cobalt transport
PBNCKJDM_01625 0.0 ykoD P abc transporter atp-binding protein
PBNCKJDM_01626 9.4e-95 S UPF0397 protein
PBNCKJDM_01627 9.5e-158 salL 2.5.1.63, 2.5.1.94 S S-adenosyl-l-methionine hydroxide adenosyltransferase
PBNCKJDM_01628 6.1e-211 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
PBNCKJDM_01629 8.8e-98 metI P ABC transporter (Permease
PBNCKJDM_01630 7.5e-189 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PBNCKJDM_01631 1e-63 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase activity
PBNCKJDM_01632 1.4e-62 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase activity
PBNCKJDM_01633 3.2e-78 dapE 3.5.1.18 E COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases
PBNCKJDM_01634 1.3e-151 metQ M Belongs to the NlpA lipoprotein family
PBNCKJDM_01635 3.8e-205 EGP Transmembrane secretion effector
PBNCKJDM_01636 0.0 3.3.1.1, 3.6.1.55, 3.6.1.67 F NUDIX domain
PBNCKJDM_01637 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PBNCKJDM_01638 5.3e-153 ET amino acid transport
PBNCKJDM_01639 1.6e-131 cbiO P ABC transporter
PBNCKJDM_01640 1.1e-136 P cobalt transport protein
PBNCKJDM_01641 4.3e-175 cbiM P PDGLE domain
PBNCKJDM_01642 8.9e-161 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
PBNCKJDM_01643 9.5e-112 ureG KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
PBNCKJDM_01644 5.3e-130 ureF O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
PBNCKJDM_01645 6.6e-78 ureE O enzyme active site formation
PBNCKJDM_01646 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
PBNCKJDM_01647 7.8e-54 ureB 3.5.1.5 E Belongs to the urease beta subunit family
PBNCKJDM_01648 7.6e-46 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
PBNCKJDM_01649 6.8e-95 ureI S AmiS/UreI family transporter
PBNCKJDM_01650 9.2e-132 S Domain of unknown function (DUF4173)
PBNCKJDM_01651 3.7e-51 yhaI L Membrane
PBNCKJDM_01652 3.4e-68 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PBNCKJDM_01653 1.8e-27 comA V protein secretion by the type I secretion system
PBNCKJDM_01654 1.1e-34 V protein secretion by the type I secretion system
PBNCKJDM_01655 4.3e-57 V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PBNCKJDM_01656 7.4e-36 V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PBNCKJDM_01657 1.2e-32 V protein secretion by the type I secretion system
PBNCKJDM_01658 5.6e-161 K sequence-specific DNA binding
PBNCKJDM_01659 4.8e-114 bcrC 3.6.1.27 I Membrane-associated phospholipid phosphatase
PBNCKJDM_01660 3.2e-90 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PBNCKJDM_01661 7.9e-96 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PBNCKJDM_01662 1.5e-247 trkA P Potassium transporter peripheral membrane component
PBNCKJDM_01663 1.2e-258 trkH P Cation transport protein
PBNCKJDM_01664 1.8e-40 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PBNCKJDM_01665 1.6e-112 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PBNCKJDM_01666 3e-99 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PBNCKJDM_01667 2.2e-73 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PBNCKJDM_01668 1.5e-16 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PBNCKJDM_01669 3.7e-137 xerD L tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site
PBNCKJDM_01670 2.1e-85 ykuL S CBS domain
PBNCKJDM_01671 3.5e-99 XK27_09740 S Phosphoesterase
PBNCKJDM_01672 6e-185 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PBNCKJDM_01673 4.2e-147 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PBNCKJDM_01674 7.6e-36 yneF S UPF0154 protein
PBNCKJDM_01675 1.4e-90 K transcriptional regulator
PBNCKJDM_01676 9.6e-244 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PBNCKJDM_01679 8.8e-98 ybhL S Belongs to the BI1 family
PBNCKJDM_01680 6.1e-93 XK27_09705 6.1.1.14 S HD superfamily hydrolase
PBNCKJDM_01681 6.4e-131 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PBNCKJDM_01682 8.4e-19 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PBNCKJDM_01683 2.9e-165 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PBNCKJDM_01684 5.2e-59 L Integrase core domain protein
PBNCKJDM_01685 1.2e-07 L transposition
PBNCKJDM_01686 1.6e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PBNCKJDM_01687 0.0 mltG ADL Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PBNCKJDM_01688 9.3e-46 XK27_09675 K -acetyltransferase
PBNCKJDM_01689 4e-20 XK27_09675 K -acetyltransferase
PBNCKJDM_01690 1.5e-255 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PBNCKJDM_01691 2.5e-23
PBNCKJDM_01692 0.0 snf 2.7.11.1 L Superfamily II DNA RNA helicases, SNF2 family'
PBNCKJDM_01693 2.5e-296 mapZ D Early cell division protein that marks the future cell division site and supports proper FtsZ ring positioning
PBNCKJDM_01694 1.5e-222 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PBNCKJDM_01695 2.5e-50 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PBNCKJDM_01696 3.1e-95 ypsA S Belongs to the UPF0398 family
PBNCKJDM_01697 2.5e-109 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PBNCKJDM_01698 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PBNCKJDM_01699 6.7e-98 blpT
PBNCKJDM_01700 2.9e-28 blpT
PBNCKJDM_01701 3e-47 spiA K sequence-specific DNA binding
PBNCKJDM_01704 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PBNCKJDM_01705 2.3e-164 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
PBNCKJDM_01706 5e-44 V CAAX protease self-immunity
PBNCKJDM_01707 4.6e-140 cppA E CppA N-terminal
PBNCKJDM_01708 4.5e-185 ampC V COG1680 Beta-lactamase class C and other penicillin binding proteins
PBNCKJDM_01709 1.2e-117 ybbL S abc transporter atp-binding protein
PBNCKJDM_01710 1.5e-127 ybbM S transport system, permease component
PBNCKJDM_01711 2.9e-87 D nuclear chromosome segregation
PBNCKJDM_01712 1e-44 hsdS_1 3.1.21.3 V type I restriction modification DNA specificity domain
PBNCKJDM_01713 2.1e-85 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PBNCKJDM_01714 1.8e-147 cah 4.2.1.1 P carbonic anhydrase
PBNCKJDM_01715 0.0 pflB 2.3.1.54 C formate acetyltransferase'
PBNCKJDM_01716 3.1e-206 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PBNCKJDM_01718 1.5e-152 yxeM ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
PBNCKJDM_01719 1e-162 yxeN P ABC transporter (Permease
PBNCKJDM_01720 4.5e-132 tcyN 3.6.3.21 E abc transporter atp-binding protein
PBNCKJDM_01721 1.9e-09 S Protein of unknown function (DUF4059)
PBNCKJDM_01722 3.2e-172 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PBNCKJDM_01723 5.1e-93 rsmD 2.1.1.171 L Methyltransferase
PBNCKJDM_01724 2.7e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PBNCKJDM_01725 2.2e-196 ylbL T Belongs to the peptidase S16 family
PBNCKJDM_01726 3.8e-184 yhcC S radical SAM protein
PBNCKJDM_01727 1.4e-98 ytqB 2.1.1.176 J (SAM)-dependent
PBNCKJDM_01729 0.0 yjcE P NhaP-type Na H and K H antiporters
PBNCKJDM_01730 1.2e-143 modF 3.6.3.21, 3.6.3.34 P abc transporter atp-binding protein
PBNCKJDM_01731 7.6e-239 hlyX S COG1253 Hemolysins and related proteins containing CBS domains
PBNCKJDM_01732 6.3e-156 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PBNCKJDM_01735 6.5e-251 pepC 3.4.22.40 E aminopeptidase
PBNCKJDM_01736 1.9e-77 yhaI L Membrane
PBNCKJDM_01737 2.1e-151 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PBNCKJDM_01738 5.7e-280 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PBNCKJDM_01739 1e-139 S COG1073 Hydrolases of the alpha beta superfamily
PBNCKJDM_01740 2.6e-76 S thiolester hydrolase activity
PBNCKJDM_01742 3.8e-40 K transcriptional
PBNCKJDM_01743 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PBNCKJDM_01744 3.9e-21 glcR K transcriptional regulator (DeoR family)
PBNCKJDM_01745 4.7e-79 glcR K transcriptional regulator (DeoR family)
PBNCKJDM_01746 1.1e-34 cof Q phosphatase activity
PBNCKJDM_01747 6e-55 cof Q phosphatase activity
PBNCKJDM_01748 4.6e-85 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I phosphatidate phosphatase activity
PBNCKJDM_01749 8.4e-96 nusG K Participates in transcription elongation, termination and antitermination
PBNCKJDM_01750 5.7e-25 secE U Belongs to the SecE SEC61-gamma family
PBNCKJDM_01751 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PBNCKJDM_01752 1.2e-165 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PBNCKJDM_01753 6.8e-56 S TM2 domain
PBNCKJDM_01754 4.7e-43
PBNCKJDM_01756 1.7e-109 cmpC S abc transporter atp-binding protein
PBNCKJDM_01757 0.0 WQ51_06230 S ABC transporter substrate binding protein
PBNCKJDM_01758 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PBNCKJDM_01759 1.4e-231 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PBNCKJDM_01760 2.2e-145 cdsA 2.7.7.41 S Belongs to the CDS family
PBNCKJDM_01761 1.1e-141 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PBNCKJDM_01762 9.8e-50 yajC U protein transport
PBNCKJDM_01763 1.9e-127 yeeN K transcriptional regulatory protein
PBNCKJDM_01764 2.8e-257 pgi 5.3.1.9 G Belongs to the GPI family
PBNCKJDM_01765 6.8e-158 rgfB 3.1.3.90 L Endonuclease/Exonuclease/phosphatase family
PBNCKJDM_01766 1.5e-104 ptsG 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PBNCKJDM_01767 5.1e-149 ptsG 2.7.1.199, 2.7.1.208, 2.7.1.211 G pts system
PBNCKJDM_01768 5.6e-65 ptsG 2.7.1.199, 2.7.1.208 G pts system
PBNCKJDM_01769 1.4e-162 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
PBNCKJDM_01770 2.5e-128 adcB P ABC transporter (Permease
PBNCKJDM_01771 6.4e-136 adcC P ABC transporter, ATP-binding protein
PBNCKJDM_01772 3.1e-72 adcR K transcriptional
PBNCKJDM_01773 1.9e-223 EGP Major facilitator Superfamily
PBNCKJDM_01774 0.0 KLT serine threonine protein kinase
PBNCKJDM_01775 6e-128 K sequence-specific DNA binding
PBNCKJDM_01776 7.4e-183 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PBNCKJDM_01777 2.1e-157 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PBNCKJDM_01778 2.7e-21
PBNCKJDM_01779 3.4e-62 oppF P Belongs to the ABC transporter superfamily
PBNCKJDM_01780 7.5e-62 oppF P Belongs to the ABC transporter superfamily
PBNCKJDM_01781 3.1e-43 oppD P Belongs to the ABC transporter superfamily
PBNCKJDM_01782 1.2e-62 oppD P Belongs to the ABC transporter superfamily
PBNCKJDM_01783 2.5e-32 oppD P Belongs to the ABC transporter superfamily
PBNCKJDM_01784 3e-27 oppD P Belongs to the ABC transporter superfamily
PBNCKJDM_01785 1.4e-38 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PBNCKJDM_01786 2.5e-09 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PBNCKJDM_01787 1.7e-33 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PBNCKJDM_01788 6.6e-11 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PBNCKJDM_01789 4.2e-27 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PBNCKJDM_01790 2.3e-139 oppA E ABC transporter substrate-binding protein
PBNCKJDM_01791 7e-10 oppA E ABC transporter substrate-binding protein
PBNCKJDM_01792 2.2e-273 sufB O assembly protein SufB
PBNCKJDM_01793 1.2e-73 nifU C SUF system FeS assembly protein, NifU family
PBNCKJDM_01794 7.7e-238 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PBNCKJDM_01795 6.3e-235 sufD O assembly protein SufD
PBNCKJDM_01796 9.5e-144 sufC O ABC-type transport system involved in Fe-S cluster assembly, ATPase component
PBNCKJDM_01797 7.1e-185 tagO 2.7.8.33, 2.7.8.35 M transferase
PBNCKJDM_01798 1.4e-136 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PBNCKJDM_01799 9.1e-153 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PBNCKJDM_01800 5.8e-275 glnP P ABC transporter
PBNCKJDM_01801 1e-123 glnQ E abc transporter atp-binding protein
PBNCKJDM_01803 5e-94 V VanZ like family
PBNCKJDM_01804 9.2e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PBNCKJDM_01805 9.3e-201 yhjX P Major Facilitator
PBNCKJDM_01806 1.1e-113 fnr5 K Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
PBNCKJDM_01807 3.3e-112 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PBNCKJDM_01808 1.7e-237 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PBNCKJDM_01809 2.5e-45 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
PBNCKJDM_01810 5.6e-59 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
PBNCKJDM_01811 2e-27 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
PBNCKJDM_01812 1.4e-09 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
PBNCKJDM_01813 2.3e-75 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PBNCKJDM_01814 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PBNCKJDM_01815 1.8e-83 nrdI F Belongs to the NrdI family
PBNCKJDM_01816 2.3e-51 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PBNCKJDM_01817 7.7e-140 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PBNCKJDM_01818 9.2e-139 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PBNCKJDM_01819 1.4e-42 F nucleotide catabolic process
PBNCKJDM_01820 4.4e-135 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PBNCKJDM_01821 3.7e-179 prmA J Ribosomal protein L11 methyltransferase
PBNCKJDM_01822 3.7e-81 mutT3 3.6.1.13, 3.6.1.55 L NUDIX domain
PBNCKJDM_01823 1.3e-84 XK27_03960 S Protein of unknown function (DUF3013)
PBNCKJDM_01824 7.6e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PBNCKJDM_01825 4.8e-73 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PBNCKJDM_01826 3.2e-218 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PBNCKJDM_01827 9.3e-150 ykuT M mechanosensitive ion channel
PBNCKJDM_01828 1.6e-77 sigH K DNA-templated transcription, initiation
PBNCKJDM_01829 1e-84
PBNCKJDM_01830 1.5e-233 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PBNCKJDM_01831 1.8e-56 amd 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
PBNCKJDM_01832 1.7e-60 hmpT S membrane
PBNCKJDM_01833 6.2e-137 thiD 2.7.1.35, 2.7.1.49, 2.7.4.7 H phosphomethylpyrimidine kinase
PBNCKJDM_01834 7.7e-140 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PBNCKJDM_01835 9.1e-185 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PBNCKJDM_01836 7.5e-298 dnaK O Heat shock 70 kDa protein
PBNCKJDM_01837 3.4e-46 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PBNCKJDM_01838 5.8e-197 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PBNCKJDM_01839 1.3e-102 acmA 3.2.1.17 NU amidase activity
PBNCKJDM_01840 1.6e-143 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
PBNCKJDM_01841 2.2e-38 ais G alpha-ribazole phosphatase activity
PBNCKJDM_01842 1.9e-242 XK27_08635 S UPF0210 protein
PBNCKJDM_01843 3.6e-39 gcvR T UPF0237 protein
PBNCKJDM_01844 3.3e-225 capA M Bacterial capsule synthesis protein
PBNCKJDM_01845 5.7e-91 tnp L Transposase
PBNCKJDM_01846 3.4e-75 isp2 S pathogenesis
PBNCKJDM_01848 4.9e-173
PBNCKJDM_01849 2.8e-39 S Helix-turn-helix domain
PBNCKJDM_01850 5.9e-222 int L Belongs to the 'phage' integrase family
PBNCKJDM_01851 5.9e-91 3.6.4.12 K Divergent AAA domain protein
PBNCKJDM_01852 5.9e-24 3.6.4.12
PBNCKJDM_01853 2.5e-183 EGP Major facilitator Superfamily
PBNCKJDM_01854 2.4e-231 spaC2 V Lanthionine synthetase C family protein
PBNCKJDM_01855 0.0 S Lantibiotic dehydratase, C terminus
PBNCKJDM_01857 1.5e-35 K sequence-specific DNA binding
PBNCKJDM_01858 9.5e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
PBNCKJDM_01859 2e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PBNCKJDM_01860 1.6e-182 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PBNCKJDM_01861 1.8e-31 K helix-turn-helix
PBNCKJDM_01862 3.4e-155 degV S DegV family
PBNCKJDM_01863 3.5e-91 yacP S RNA-binding protein containing a PIN domain
PBNCKJDM_01864 5.7e-135 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PBNCKJDM_01867 4.2e-68 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PBNCKJDM_01868 1.5e-258 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PBNCKJDM_01869 1.1e-112 cysE 2.3.1.30 E serine acetyltransferase
PBNCKJDM_01870 7.9e-106 S SseB protein N-terminal domain
PBNCKJDM_01871 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PBNCKJDM_01872 4.2e-231 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PBNCKJDM_01873 1.8e-32 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PBNCKJDM_01874 3.2e-151 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PBNCKJDM_01875 0.0 clpC O Belongs to the ClpA ClpB family
PBNCKJDM_01876 6.2e-76 ctsR K Belongs to the CtsR family
PBNCKJDM_01877 1.1e-83 S Putative small multi-drug export protein
PBNCKJDM_01878 3e-182 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PBNCKJDM_01879 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
PBNCKJDM_01882 7.1e-80 yocD 3.4.17.13 V proteins, homologs of microcin C7 resistance protein MccF
PBNCKJDM_01883 7.9e-76 yocD 3.4.17.13 V carboxypeptidase activity
PBNCKJDM_01885 6.4e-41 L transposition
PBNCKJDM_01886 6.9e-89 L Integrase core domain protein
PBNCKJDM_01887 3.5e-97 S reductase
PBNCKJDM_01888 2.6e-55 badR K DNA-binding transcription factor activity
PBNCKJDM_01889 5.5e-36 XK27_02060 S Transglycosylase associated protein
PBNCKJDM_01890 1.2e-235 pepS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
PBNCKJDM_01891 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PBNCKJDM_01896 1.9e-07
PBNCKJDM_01899 2.6e-10
PBNCKJDM_01904 9.1e-83 L Integrase core domain protein
PBNCKJDM_01905 9.1e-83 L Integrase core domain protein
PBNCKJDM_01906 2.3e-66 spxA_2 1.20.4.1 P Belongs to the ArsC family
PBNCKJDM_01907 4.7e-205 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PBNCKJDM_01908 6.5e-232 cinA 3.5.1.42 S Belongs to the CinA family
PBNCKJDM_01909 1.9e-106 tag 3.2.2.20 L 3-methyladenine DNA glycosylase
PBNCKJDM_01910 7.8e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PBNCKJDM_01912 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PBNCKJDM_01914 6.5e-63 KT phosphorelay signal transduction system
PBNCKJDM_01915 1.9e-80 S Protein of unknown function (DUF3021)
PBNCKJDM_01916 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PBNCKJDM_01917 1e-57 ymcA 3.6.3.21 S Belongs to the UPF0342 family
PBNCKJDM_01918 8.2e-70 argR K Regulates arginine biosynthesis genes
PBNCKJDM_01920 1.3e-57 T Toxic component of a toxin-antitoxin (TA) module
PBNCKJDM_01923 3.1e-35 amiA E ABC transporter, substrate-binding protein, family 5
PBNCKJDM_01924 1.2e-09 L Transposase
PBNCKJDM_01925 0.0 argS 6.1.1.19 J Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
PBNCKJDM_01926 8.7e-248 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PBNCKJDM_01927 2e-140 1.1.1.169 H Ketopantoate reductase
PBNCKJDM_01928 2.2e-204 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PBNCKJDM_01929 3.8e-70 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PBNCKJDM_01930 3.4e-241 purD 6.3.4.13 F Belongs to the GARS family
PBNCKJDM_01931 2.3e-161 S CHAP domain
PBNCKJDM_01932 2e-32 L Integrase core domain protein
PBNCKJDM_01933 3.5e-50 L transposition
PBNCKJDM_01934 1e-90 L transposase activity
PBNCKJDM_01935 1.5e-294 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PBNCKJDM_01936 1.4e-101 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PBNCKJDM_01937 1.8e-184 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PBNCKJDM_01938 1.3e-276 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PBNCKJDM_01939 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PBNCKJDM_01940 9.9e-129 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PBNCKJDM_01941 9.3e-34 acpP1 IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PBNCKJDM_01942 9.6e-178 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PBNCKJDM_01943 7e-144 recO L Involved in DNA repair and RecF pathway recombination
PBNCKJDM_01944 2.9e-218 araT 2.6.1.1 E Aminotransferase
PBNCKJDM_01945 1.2e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PBNCKJDM_01946 3.3e-96 usp 3.5.1.28 CBM50 S CHAP domain
PBNCKJDM_01947 9.1e-87 mreD M Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
PBNCKJDM_01948 5.5e-139 mreC M Involved in formation and maintenance of cell shape
PBNCKJDM_01954 5.3e-11
PBNCKJDM_01966 9.1e-83 L Integrase core domain protein

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)