| ORF_ID | e_value | Gene_name | EC_number | CAZy | COGs | Description |
|---|---|---|---|---|---|---|
| ALLFENHH_00001 | 2.1e-61 | rplQ | J | Ribosomal protein L17 | ||
| ALLFENHH_00002 | 5.7e-172 | rpoA | 2.7.7.6 | K | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | |
| ALLFENHH_00003 | 3.4e-62 | rpsK | J | Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome | ||
| ALLFENHH_00004 | 1.1e-59 | rpsM | J | Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits | ||
| ALLFENHH_00005 | 3.1e-33 | infA | J | One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex | ||
| ALLFENHH_00006 | 2.1e-125 | adk | 2.7.4.3 | F | Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism | |
| ALLFENHH_00007 | 1.5e-236 | secY | U | The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently | ||
| ALLFENHH_00008 | 6.3e-70 | rplO | J | Binds to the 23S rRNA | ||
| ALLFENHH_00009 | 2.2e-24 | rpmD | J | Ribosomal protein L30 | ||
| ALLFENHH_00010 | 6.8e-84 | rpsE | J | Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body | ||
| ALLFENHH_00011 | 3.3e-56 | rplR | J | This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance | ||
| ALLFENHH_00012 | 3.5e-94 | rplF | J | This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center | ||
| ALLFENHH_00013 | 1e-66 | rpsH | J | One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit | ||
| ALLFENHH_00014 | 3.2e-95 | rplE | J | This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits | ||
| ALLFENHH_00015 | 2.4e-50 | rplX | J | One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit | ||
| ALLFENHH_00016 | 4.3e-59 | rplN | J | Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome | ||
| ALLFENHH_00017 | 2.5e-40 | rpsQ | J | One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA | ||
| ALLFENHH_00018 | 1.4e-24 | rpmC | J | Belongs to the universal ribosomal protein uL29 family | ||
| ALLFENHH_00019 | 9.2e-77 | rplP | J | Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs | ||
| ALLFENHH_00020 | 2.1e-117 | rpsC | J | Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation | ||
| ALLFENHH_00021 | 2.8e-52 | rplV | J | The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome | ||
| ALLFENHH_00022 | 8.2e-47 | rpsS | J | Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA | ||
| ALLFENHH_00023 | 8.1e-146 | rplB | J | One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity | ||
| ALLFENHH_00024 | 1.8e-44 | rplW | J | One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome | ||
| ALLFENHH_00025 | 5.5e-107 | rplD | J | Forms part of the polypeptide exit tunnel | ||
| ALLFENHH_00026 | 4.4e-112 | rplC | J | One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit | ||
| ALLFENHH_00027 | 2.6e-49 | rpsJ | J | Involved in the binding of tRNA to the ribosomes | ||
| ALLFENHH_00028 | 0.0 | fusA | J | Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome | ||
| ALLFENHH_00029 | 5.5e-83 | rpsG | J | One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA | ||
| ALLFENHH_00030 | 3.6e-70 | rpsL | J | Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit | ||
| ALLFENHH_00031 | 3.2e-116 | pilD | 3.4.23.43 | NOU | Bacterial Peptidase A24 N-terminal domain | |
| ALLFENHH_00032 | 0.0 | rpoC | 2.7.7.6 | K | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | |
| ALLFENHH_00033 | 0.0 | rpoB | 2.7.7.6 | K | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates | |
| ALLFENHH_00034 | 1.5e-109 | K | Bacterial regulatory proteins, tetR family | |||
| ALLFENHH_00035 | 0.0 | clpC | O | Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE | ||
| ALLFENHH_00036 | 6.9e-78 | ctsR | K | Belongs to the CtsR family | ||
| ALLFENHH_00044 | 4.1e-218 | serS | 6.1.1.11 | J | Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) | |
| ALLFENHH_00045 | 2.5e-115 | dak | 2.7.1.74, 2.7.1.76 | F | deoxynucleoside kinase | |
| ALLFENHH_00046 | 2.5e-114 | vanY | 3.4.17.14 | M | D-alanyl-D-alanine carboxypeptidase | |
| ALLFENHH_00047 | 1.5e-264 | lysP | E | amino acid | ||
| ALLFENHH_00048 | 0.0 | alsS | 2.2.1.6 | EH | Belongs to the TPP enzyme family | |
| ALLFENHH_00049 | 4.2e-92 | K | Transcriptional regulator | |||
| ALLFENHH_00050 | 2.8e-99 | 2.3.1.128 | J | Acetyltransferase (GNAT) domain | ||
| ALLFENHH_00051 | 2e-154 | I | alpha/beta hydrolase fold | |||
| ALLFENHH_00052 | 2.5e-118 | lssY | 3.6.1.27 | I | phosphatase | |
| ALLFENHH_00053 | 1.5e-189 | brpA | K | Cell envelope-like function transcriptional attenuator common domain protein | ||
| ALLFENHH_00054 | 2.2e-76 | S | Threonine/Serine exporter, ThrE | |||
| ALLFENHH_00055 | 1.5e-130 | thrE | S | Putative threonine/serine exporter | ||
| ALLFENHH_00056 | 6e-31 | cspC | K | Cold shock protein | ||
| ALLFENHH_00057 | 2e-120 | sirR | K | iron dependent repressor | ||
| ALLFENHH_00058 | 2.6e-58 | |||||
| ALLFENHH_00059 | 1.7e-84 | merR | K | MerR HTH family regulatory protein | ||
| ALLFENHH_00060 | 7e-270 | lmrB | EGP | Major facilitator Superfamily | ||
| ALLFENHH_00061 | 1.4e-117 | S | Domain of unknown function (DUF4811) | |||
| ALLFENHH_00062 | 1.7e-106 | |||||
| ALLFENHH_00063 | 4.4e-35 | yyaN | K | MerR HTH family regulatory protein | ||
| ALLFENHH_00064 | 1.3e-120 | azlC | E | branched-chain amino acid | ||
| ALLFENHH_00065 | 8e-49 | azlD | S | Branched-chain amino acid transport protein (AzlD) | ||
| ALLFENHH_00066 | 0.0 | asnB | 6.3.5.4 | E | Asparagine synthase | |
| ALLFENHH_00067 | 1.6e-219 | dapG | 1.1.1.3, 2.7.2.4 | E | Amino acid kinase family | |
| ALLFENHH_00068 | 8e-282 | murE | 6.3.2.10, 6.3.2.13, 6.3.2.7 | M | Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan | |
| ALLFENHH_00069 | 1e-254 | xylP2 | G | symporter | ||
| ALLFENHH_00070 | 9e-192 | nlhH_1 | I | alpha/beta hydrolase fold | ||
| ALLFENHH_00071 | 5.6e-49 | |||||
| ALLFENHH_00072 | 5e-122 | pgm6 | 5.4.2.11, 5.4.2.12 | G | Phosphoglycerate mutase family | |
| ALLFENHH_00073 | 2.6e-103 | 3.2.2.20 | K | FR47-like protein | ||
| ALLFENHH_00074 | 1.3e-126 | yibF | S | overlaps another CDS with the same product name | ||
| ALLFENHH_00075 | 1.9e-220 | yibE | S | overlaps another CDS with the same product name | ||
| ALLFENHH_00076 | 2.3e-179 | |||||
| ALLFENHH_00077 | 1.3e-137 | S | NADPH-dependent FMN reductase | |||
| ALLFENHH_00078 | 1.5e-50 | K | helix_turn_helix, Arsenical Resistance Operon Repressor | |||
| ALLFENHH_00079 | 9e-164 | rluD | 5.4.99.23, 5.4.99.28, 5.4.99.29 | J | Responsible for synthesis of pseudouridine from uracil | |
| ALLFENHH_00080 | 0.0 | recQ | 3.6.4.12 | L | ATP-dependent DNA helicase RecQ | |
| ALLFENHH_00081 | 4.1e-32 | L | leucine-zipper of insertion element IS481 | |||
| ALLFENHH_00082 | 8.5e-41 | |||||
| ALLFENHH_00083 | 7.3e-220 | 2.7.7.7, 3.6.4.12 | L | DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease | ||
| ALLFENHH_00084 | 5.7e-277 | pipD | E | Dipeptidase | ||
| ALLFENHH_00085 | 9.9e-199 | asnA | 6.3.1.1 | F | aspartate--ammonia ligase | |
| ALLFENHH_00086 | 5.6e-255 | asnS | 6.1.1.22 | J | Asparaginyl-tRNA synthetase | |
| ALLFENHH_00087 | 2.9e-116 | azoR | I | Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity | ||
| ALLFENHH_00088 | 8.8e-81 | rmaD | K | Transcriptional regulator | ||
| ALLFENHH_00090 | 0.0 | 1.3.5.4 | C | FMN_bind | ||
| ALLFENHH_00091 | 4.7e-171 | K | Transcriptional regulator | |||
| ALLFENHH_00092 | 3.5e-97 | K | Helix-turn-helix domain | |||
| ALLFENHH_00093 | 4.5e-140 | K | sequence-specific DNA binding | |||
| ALLFENHH_00094 | 5.9e-88 | S | AAA domain | |||
| ALLFENHH_00096 | 0.0 | nagH | 2.7.13.3, 3.2.1.4, 3.2.1.52, 3.2.1.78, 3.2.1.8 | GH20,GH26,GH5,GH9 | M | MucBP domain |
| ALLFENHH_00097 | 1.8e-95 | XK27_09665 | 5.4.2.11 | G | Phosphoglycerate mutase family | |
| ALLFENHH_00098 | 2.6e-48 | hsdS | 3.1.21.3 | V | Type I restriction modification DNA specificity domain | |
| ALLFENHH_00099 | 3.8e-173 | L | Belongs to the 'phage' integrase family | |||
| ALLFENHH_00100 | 6.4e-77 | 3.1.21.3 | V | Type I restriction modification DNA specificity domain | ||
| ALLFENHH_00101 | 7e-300 | hsdM | 2.1.1.72 | V | type I restriction-modification system | |
| ALLFENHH_00102 | 0.0 | hsdR | 3.1.21.3 | V | Subunit R is required for both nuclease and ATPase activities, but not for modification | |
| ALLFENHH_00103 | 6.7e-159 | pepN | 3.4.11.2 | E | aminopeptidase | |
| ALLFENHH_00104 | 0.0 | pepN | 3.4.11.2 | E | aminopeptidase | |
| ALLFENHH_00105 | 1.6e-105 | G | Glycogen debranching enzyme | |||
| ALLFENHH_00106 | 9.6e-50 | 2.7.1.196, 2.7.1.205 | G | PTS system, Lactose/Cellobiose specific IIA subunit | ||
| ALLFENHH_00107 | 1.7e-163 | yjdB | S | Domain of unknown function (DUF4767) | ||
| ALLFENHH_00108 | 1.8e-150 | Q | Fumarylacetoacetate (FAA) hydrolase family | |||
| ALLFENHH_00109 | 5.3e-72 | asp2 | S | Asp23 family, cell envelope-related function |
Showing 1 to 100 of 2,947 entries
eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)