ORF_ID e_value Gene_name EC_number CAZy COGs Description
GAPBOOJH_00001 3.5e-252 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GAPBOOJH_00002 5.2e-204 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
GAPBOOJH_00004 2.9e-31 yaaA S S4 domain protein YaaA
GAPBOOJH_00005 7.3e-203 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GAPBOOJH_00006 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GAPBOOJH_00007 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GAPBOOJH_00008 4.7e-08 ssb_2 L Single-strand binding protein family
GAPBOOJH_00010 2.6e-266 L Transposase DDE domain
GAPBOOJH_00012 2.6e-266 L Transposase DDE domain
GAPBOOJH_00013 2.7e-15
GAPBOOJH_00015 4.2e-74 ssb_2 L Single-strand binding protein family
GAPBOOJH_00016 2.7e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
GAPBOOJH_00017 7.3e-69 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
GAPBOOJH_00018 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GAPBOOJH_00019 1.5e-91 yhbO 3.5.1.124 S DJ-1/PfpI family
GAPBOOJH_00020 9.8e-280 cydA 1.10.3.14 C Cytochrome bd terminal oxidase subunit I
GAPBOOJH_00021 1e-182 cydB 1.10.3.14 C Cytochrome bd terminal oxidase subunit II
GAPBOOJH_00022 2.1e-28
GAPBOOJH_00023 9.2e-108 S CAAX protease self-immunity
GAPBOOJH_00024 5.5e-84 V Best Blastp hit gi 7514214 pir G75157 'abc transporter, ATP-binding protein, puta tive PAB2069 - Pyrococcus abyssi (strain Orsay)' gi 5457852 emb CAB49342.1 '(AJ248284) ABC transporter, ATP-binding protein, puta tive Pyrococcus abyssi ', score 77, E-value 3.00E-13
GAPBOOJH_00025 2.6e-266 L Transposase DDE domain
GAPBOOJH_00026 1.1e-161 V ABC transporter
GAPBOOJH_00027 4.5e-189 amtB P Ammonium Transporter Family
GAPBOOJH_00028 8.6e-212 P Pyridine nucleotide-disulphide oxidoreductase
GAPBOOJH_00029 4e-125 usp 3.5.1.28 CBM50 D CHAP domain
GAPBOOJH_00030 0.0 ylbB V ABC transporter permease
GAPBOOJH_00031 6.3e-128 macB V ABC transporter, ATP-binding protein
GAPBOOJH_00032 3e-96 K transcriptional regulator
GAPBOOJH_00033 6.6e-153 supH G Sucrose-6F-phosphate phosphohydrolase
GAPBOOJH_00034 1.4e-45
GAPBOOJH_00035 2e-127 S membrane transporter protein
GAPBOOJH_00036 2.1e-103 S Protein of unknown function (DUF1211)
GAPBOOJH_00037 5e-113 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
GAPBOOJH_00038 8.5e-54
GAPBOOJH_00040 1.5e-285 pipD E Dipeptidase
GAPBOOJH_00041 6.1e-106 S Membrane
GAPBOOJH_00042 2.1e-86
GAPBOOJH_00043 5.9e-53
GAPBOOJH_00045 6.1e-244 ybfG M peptidoglycan-binding domain-containing protein
GAPBOOJH_00046 2.4e-122 azlC E branched-chain amino acid
GAPBOOJH_00047 1.5e-50 azlD S Branched-chain amino acid transport protein (AzlD)
GAPBOOJH_00048 0.0 uidA 3.2.1.31 G Belongs to the glycosyl hydrolase 2 family
GAPBOOJH_00049 0.0 M Glycosyl hydrolase family 59
GAPBOOJH_00050 1.4e-116 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
GAPBOOJH_00051 4.6e-177 kdgK 2.7.1.45 G pfkB family carbohydrate kinase
GAPBOOJH_00052 9.5e-280 uxaC 5.3.1.12 G glucuronate isomerase
GAPBOOJH_00053 3.3e-216 uxuA 4.2.1.8 G Catalyzes the dehydration of D-mannonate
GAPBOOJH_00054 0.0 mtlD 1.1.1.17, 1.1.1.57 G Mannitol dehydrogenase C-terminal domain
GAPBOOJH_00055 7.8e-267 3.2.1.45 GH30 G Glycosyl hydrolase family 30 TIM-barrel domain
GAPBOOJH_00056 1.8e-229 G Major Facilitator
GAPBOOJH_00057 1.2e-126 kdgR K FCD domain
GAPBOOJH_00058 4.3e-190 kdgK 2.7.1.45 G pfkB family carbohydrate kinase
GAPBOOJH_00059 0.0 M Glycosyl hydrolase family 59
GAPBOOJH_00060 1.6e-57
GAPBOOJH_00061 1e-64 S pyridoxamine 5-phosphate
GAPBOOJH_00062 1.3e-241 EGP Major facilitator Superfamily
GAPBOOJH_00063 2e-219 3.1.1.83 I Alpha beta hydrolase
GAPBOOJH_00064 8.4e-46 K Bacterial regulatory proteins, tetR family
GAPBOOJH_00065 1.1e-192 L Transposase and inactivated derivatives, IS30 family
GAPBOOJH_00066 1.6e-46 K Bacterial regulatory proteins, tetR family
GAPBOOJH_00068 0.0 ydgH S MMPL family
GAPBOOJH_00069 1e-105 K Tetracycline repressor, C-terminal all-alpha domain
GAPBOOJH_00070 4.3e-122 S Sulfite exporter TauE/SafE
GAPBOOJH_00071 7.6e-244 3.5.4.28, 3.5.4.31 F Amidohydrolase family
GAPBOOJH_00072 1.9e-69 S An automated process has identified a potential problem with this gene model
GAPBOOJH_00073 1e-148 S Protein of unknown function (DUF3100)
GAPBOOJH_00075 1.9e-110 opuCD P Binding-protein-dependent transport system inner membrane component
GAPBOOJH_00076 1.6e-174 opuCC M Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
GAPBOOJH_00077 4.7e-106 opuCB E ABC transporter permease
GAPBOOJH_00078 1.2e-214 opuCA E ABC transporter, ATP-binding protein
GAPBOOJH_00079 0.0 3.6.3.3, 3.6.3.5 P P-type ATPase
GAPBOOJH_00080 5.6e-33 copZ P Heavy-metal-associated domain
GAPBOOJH_00081 3.6e-100 dps P Belongs to the Dps family
GAPBOOJH_00082 3.1e-116 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
GAPBOOJH_00084 6.3e-157 S CAAX protease self-immunity
GAPBOOJH_00085 2.2e-250 manY 2.7.1.191, 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
GAPBOOJH_00086 1.6e-79 frvA 2.7.1.194, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GAPBOOJH_00087 0.0 mngB 3.2.1.170 GH38 G Glycosyl hydrolases family 38 N-terminal domain
GAPBOOJH_00088 3.1e-139 K SIS domain
GAPBOOJH_00089 2.6e-274 bgl 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GAPBOOJH_00090 4.8e-157 bglK_1 2.7.1.2 GK ROK family
GAPBOOJH_00092 5.2e-142 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
GAPBOOJH_00093 5.5e-228 trpB 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
GAPBOOJH_00094 3.2e-104 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E Belongs to the TrpF family
GAPBOOJH_00095 3.3e-133 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
GAPBOOJH_00096 3.2e-181 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
GAPBOOJH_00098 2.1e-300 norB EGP Major Facilitator
GAPBOOJH_00099 8.8e-110 K Bacterial regulatory proteins, tetR family
GAPBOOJH_00100 4.3e-116
GAPBOOJH_00101 8e-158 S ABC-type transport system involved in multi-copper enzyme maturation permease component
GAPBOOJH_00102 1.3e-109
GAPBOOJH_00103 2.1e-99 V ATPases associated with a variety of cellular activities
GAPBOOJH_00104 1.7e-53
GAPBOOJH_00105 4.4e-106 1.1.1.133, 5.1.3.13 M dTDP-4-dehydrorhamnose 3,5-epimerase
GAPBOOJH_00106 7.7e-135 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
GAPBOOJH_00107 2.1e-160 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GAPBOOJH_00108 4.9e-218 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
GAPBOOJH_00109 7.7e-73 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
GAPBOOJH_00110 5.4e-253 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
GAPBOOJH_00111 4.4e-258 lysC 2.7.2.4 E Belongs to the aspartokinase family
GAPBOOJH_00112 5.6e-186 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
GAPBOOJH_00113 9.7e-197 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GAPBOOJH_00114 8e-61
GAPBOOJH_00115 5e-72 3.6.1.55 L NUDIX domain
GAPBOOJH_00116 1.1e-150 EG EamA-like transporter family
GAPBOOJH_00118 2.1e-51 L PFAM transposase, IS4 family protein
GAPBOOJH_00119 1.4e-105 L PFAM transposase, IS4 family protein
GAPBOOJH_00120 2.1e-61 K Tetracyclin repressor, C-terminal all-alpha domain
GAPBOOJH_00121 1.5e-55 V ABC-2 type transporter
GAPBOOJH_00122 6.8e-80 P ABC-2 family transporter protein
GAPBOOJH_00123 7.5e-100 V ABC transporter, ATP-binding protein
GAPBOOJH_00124 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
GAPBOOJH_00125 5.1e-70 rplI J Binds to the 23S rRNA
GAPBOOJH_00126 1.7e-246 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
GAPBOOJH_00127 2.1e-221
GAPBOOJH_00128 0.0 sacX 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
GAPBOOJH_00129 1.5e-161 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
GAPBOOJH_00130 6.6e-198 4.2.1.126 S Bacterial protein of unknown function (DUF871)
GAPBOOJH_00131 7.5e-155 K Helix-turn-helix domain, rpiR family
GAPBOOJH_00132 4.5e-106 K Transcriptional regulator C-terminal region
GAPBOOJH_00133 5.4e-127 V ABC transporter, ATP-binding protein
GAPBOOJH_00134 0.0 ylbB V ABC transporter permease
GAPBOOJH_00135 6.7e-206 4.1.1.52 S Amidohydrolase
GAPBOOJH_00136 4.9e-251 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GAPBOOJH_00137 0.0 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
GAPBOOJH_00138 1.3e-54 nmtR K helix_turn_helix, Arsenical Resistance Operon Repressor
GAPBOOJH_00139 5.5e-204 yxaM EGP Major facilitator Superfamily
GAPBOOJH_00140 5.3e-153 K Helix-turn-helix XRE-family like proteins
GAPBOOJH_00141 1.6e-26 S Phospholipase_D-nuclease N-terminal
GAPBOOJH_00142 6.5e-120 yxlF V ABC transporter
GAPBOOJH_00143 1.2e-103 S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
GAPBOOJH_00144 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
GAPBOOJH_00145 9.7e-30
GAPBOOJH_00146 7.7e-51
GAPBOOJH_00147 3e-111 K Bacteriophage CI repressor helix-turn-helix domain
GAPBOOJH_00148 4.8e-182 yveB 2.7.4.29 I PAP2 superfamily
GAPBOOJH_00149 1.2e-207 mccF V LD-carboxypeptidase
GAPBOOJH_00150 7.3e-42
GAPBOOJH_00151 1.1e-206 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
GAPBOOJH_00152 2.1e-39
GAPBOOJH_00153 3.8e-111
GAPBOOJH_00154 7.8e-226 EGP Major facilitator Superfamily
GAPBOOJH_00155 5.7e-86
GAPBOOJH_00156 1.5e-200 T PhoQ Sensor
GAPBOOJH_00157 1.6e-120 K Transcriptional regulatory protein, C terminal
GAPBOOJH_00158 4.3e-91 ogt 2.1.1.63 L Methyltransferase
GAPBOOJH_00159 1.4e-189 ldhD3 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GAPBOOJH_00160 2.9e-48 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
GAPBOOJH_00161 5.8e-52 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
GAPBOOJH_00162 8e-85
GAPBOOJH_00163 1.6e-252 celD 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GAPBOOJH_00164 8e-287 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GAPBOOJH_00165 4.9e-131 K UTRA
GAPBOOJH_00166 5.6e-41
GAPBOOJH_00167 2.4e-57 ypaA S Protein of unknown function (DUF1304)
GAPBOOJH_00168 5.2e-54 S Protein of unknown function (DUF1516)
GAPBOOJH_00169 1.4e-254 pbuO S permease
GAPBOOJH_00170 9e-53 S DsrE/DsrF-like family
GAPBOOJH_00171 5.8e-188 mhqA 3.4.21.26 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GAPBOOJH_00172 1e-42
GAPBOOJH_00173 5.6e-106 yoaA 2.3.1.128 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GAPBOOJH_00174 0.0
GAPBOOJH_00176 1.1e-123 yqcC S WxL domain surface cell wall-binding
GAPBOOJH_00177 1.3e-183 ynjC S Cell surface protein
GAPBOOJH_00179 3.8e-271 L Mga helix-turn-helix domain
GAPBOOJH_00180 3.7e-150 yhaI S Protein of unknown function (DUF805)
GAPBOOJH_00181 7.4e-55
GAPBOOJH_00182 2.7e-252 rarA L recombination factor protein RarA
GAPBOOJH_00183 1.2e-216 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GAPBOOJH_00184 3.2e-133 K DeoR C terminal sensor domain
GAPBOOJH_00185 2.1e-285 2.7.1.12, 2.7.1.17, 2.7.1.5 G FGGY family of carbohydrate kinases, C-terminal domain
GAPBOOJH_00186 6.4e-162 4.1.2.13 G Fructose-bisphosphate aldolase class-II
GAPBOOJH_00187 7.3e-242 sgaT 2.7.1.194 S PTS system sugar-specific permease component
GAPBOOJH_00188 1.3e-159 pphA 3.1.3.16 T Calcineurin-like phosphoesterase superfamily domain
GAPBOOJH_00189 1e-136 magIII L Base excision DNA repair protein, HhH-GPD family
GAPBOOJH_00190 5.7e-248 bmr3 EGP Major facilitator Superfamily
GAPBOOJH_00191 2.6e-266 L Transposase DDE domain
GAPBOOJH_00194 3e-89
GAPBOOJH_00196 6.6e-47 V ATPase activity
GAPBOOJH_00197 1.3e-16
GAPBOOJH_00199 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
GAPBOOJH_00200 1.8e-303 oppA E ABC transporter, substratebinding protein
GAPBOOJH_00201 6.3e-76
GAPBOOJH_00202 8.6e-117
GAPBOOJH_00203 2e-116
GAPBOOJH_00204 2.5e-118 V ATPases associated with a variety of cellular activities
GAPBOOJH_00205 1.6e-74
GAPBOOJH_00206 2.5e-80 S NUDIX domain
GAPBOOJH_00207 3e-212 S nuclear-transcribed mRNA catabolic process, no-go decay
GAPBOOJH_00208 0.0 fnq20 1.13.12.16 S FAD-NAD(P)-binding
GAPBOOJH_00209 9.4e-261 nox 1.6.3.4 C NADH oxidase
GAPBOOJH_00210 1.7e-116
GAPBOOJH_00211 5.1e-210 S TPM domain
GAPBOOJH_00212 4e-129 yxaA S Sulfite exporter TauE/SafE
GAPBOOJH_00213 1e-55 ywjH S Protein of unknown function (DUF1634)
GAPBOOJH_00215 1.1e-64
GAPBOOJH_00216 2.1e-51
GAPBOOJH_00217 2.7e-82 fld C Flavodoxin
GAPBOOJH_00218 3.4e-36
GAPBOOJH_00219 6.7e-27
GAPBOOJH_00220 1.1e-170 1.1.1.26 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GAPBOOJH_00221 9.1e-71 pdxH S Pyridoxamine 5'-phosphate oxidase
GAPBOOJH_00222 6.4e-38 S Transglycosylase associated protein
GAPBOOJH_00223 5.8e-89 S Protein conserved in bacteria
GAPBOOJH_00224 2.5e-29
GAPBOOJH_00225 5.1e-61 asp23 S Asp23 family, cell envelope-related function
GAPBOOJH_00226 7.9e-65 asp2 S Asp23 family, cell envelope-related function
GAPBOOJH_00227 2.4e-129 hadL 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GAPBOOJH_00228 6e-115 S Protein of unknown function (DUF969)
GAPBOOJH_00229 5.2e-146 S Protein of unknown function (DUF979)
GAPBOOJH_00230 8.5e-119 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GAPBOOJH_00231 5.7e-104 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
GAPBOOJH_00233 1e-127 cobQ S glutamine amidotransferase
GAPBOOJH_00234 3.7e-66
GAPBOOJH_00235 2.8e-134 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
GAPBOOJH_00236 2.4e-142 noc K Belongs to the ParB family
GAPBOOJH_00237 7.4e-138 soj D Sporulation initiation inhibitor
GAPBOOJH_00238 2e-155 spo0J K Belongs to the ParB family
GAPBOOJH_00239 1.3e-30 yyzM S Bacterial protein of unknown function (DUF951)
GAPBOOJH_00240 2.8e-185 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
GAPBOOJH_00241 7.3e-141 XK27_01040 S Protein of unknown function (DUF1129)
GAPBOOJH_00242 5.1e-268 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GAPBOOJH_00243 1.7e-117
GAPBOOJH_00244 2.5e-121 K response regulator
GAPBOOJH_00245 1.2e-219 hpk31 2.7.13.3 T Histidine kinase
GAPBOOJH_00246 5.3e-237 dacA 3.4.16.4 M Belongs to the peptidase S11 family
GAPBOOJH_00247 1.2e-85 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GAPBOOJH_00248 1e-295 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GAPBOOJH_00249 2.7e-140 racD 5.1.1.13 G Belongs to the aspartate glutamate racemases family
GAPBOOJH_00250 1.1e-163 yvgN C Aldo keto reductase
GAPBOOJH_00251 7.4e-141 iolR K DeoR C terminal sensor domain
GAPBOOJH_00252 1.9e-267 iolT EGP Major facilitator Superfamily
GAPBOOJH_00253 9.5e-275 iolA 1.2.1.18, 1.2.1.27 C Belongs to the aldehyde dehydrogenase family
GAPBOOJH_00254 6e-154 iolB 5.3.1.30 G Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate)
GAPBOOJH_00255 5.4e-178 iolC 2.7.1.92 H Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP)
GAPBOOJH_00256 0.0 iolD 3.7.1.22 E Involved in the cleavage of the C1-C2 bond of 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy- glucuronate (5DG)
GAPBOOJH_00257 7.1e-192 iolG 1.1.1.18, 1.1.1.369 C Involved in the oxidation of myo-inositol (MI) and D- chiro-inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D-chiro-inositol (1KDCI), respectively
GAPBOOJH_00258 1.8e-195 iolG2 1.1.1.18, 1.1.1.369 S Oxidoreductase family, C-terminal alpha/beta domain
GAPBOOJH_00259 1.2e-174 iolE 4.2.1.44 G Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6 3,5-pentahydroxycyclohexanone) to 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol)
GAPBOOJH_00260 6.2e-157 iolJ 4.1.2.13, 4.1.2.29 G Fructose-bisphosphate aldolase class-II
GAPBOOJH_00261 1.7e-66 iolK S Tautomerase enzyme
GAPBOOJH_00262 1.7e-157 iolI 5.3.99.11 G Xylose isomerase-like TIM barrel
GAPBOOJH_00263 1.9e-169 iolH G Xylose isomerase-like TIM barrel
GAPBOOJH_00264 5.6e-147 gntR K rpiR family
GAPBOOJH_00265 9.6e-169 gnd 1.1.1.343, 1.1.1.44 G Dehydrogenase
GAPBOOJH_00266 7.9e-304 gntK 2.7.1.12, 2.7.1.17, 2.7.1.5 G Belongs to the FGGY kinase family
GAPBOOJH_00267 5e-206 gntP EG Gluconate
GAPBOOJH_00268 4.9e-57
GAPBOOJH_00269 4.1e-130 fhuC 3.6.3.35 P ABC transporter
GAPBOOJH_00270 3e-134 znuB U ABC 3 transport family
GAPBOOJH_00271 6.4e-167 T Calcineurin-like phosphoesterase superfamily domain
GAPBOOJH_00272 1e-159 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
GAPBOOJH_00273 0.0 pepF E oligoendopeptidase F
GAPBOOJH_00274 2e-200 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GAPBOOJH_00275 2.3e-246 brnQ U Component of the transport system for branched-chain amino acids
GAPBOOJH_00276 4.5e-70 T Sh3 type 3 domain protein
GAPBOOJH_00277 2.2e-134 glcR K DeoR C terminal sensor domain
GAPBOOJH_00278 7.5e-146 M Glycosyltransferase like family 2
GAPBOOJH_00279 1.8e-133 XK27_06755 S Protein of unknown function (DUF975)
GAPBOOJH_00280 6.4e-52
GAPBOOJH_00281 2e-107 lepB 3.4.21.89 U Belongs to the peptidase S26 family
GAPBOOJH_00282 1.6e-174 draG O ADP-ribosylglycohydrolase
GAPBOOJH_00283 4.7e-293 S ABC transporter
GAPBOOJH_00284 8.5e-139 ksgA 2.1.1.182, 2.1.1.197, 2.5.1.134 J rRNA (adenine-N6,N6-)-dimethyltransferase activity
GAPBOOJH_00285 6.1e-35
GAPBOOJH_00286 1.5e-70 S COG NOG38524 non supervised orthologous group
GAPBOOJH_00287 6.8e-20 S the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts
GAPBOOJH_00288 2.9e-43 trxC O Belongs to the thioredoxin family
GAPBOOJH_00289 2.8e-132 thrE S Putative threonine/serine exporter
GAPBOOJH_00290 3.5e-74 S Threonine/Serine exporter, ThrE
GAPBOOJH_00291 1.3e-213 livJ E Receptor family ligand binding region
GAPBOOJH_00292 6.7e-151 livH U Branched-chain amino acid transport system / permease component
GAPBOOJH_00293 1.7e-120 livM E Branched-chain amino acid transport system / permease component
GAPBOOJH_00294 4.7e-140 livG E Branched-chain amino acid ATP-binding cassette transporter
GAPBOOJH_00295 1.8e-122 livF E ABC transporter
GAPBOOJH_00296 1.2e-52 yvdC S MazG nucleotide pyrophosphohydrolase domain
GAPBOOJH_00297 1.4e-167 S Alpha/beta hydrolase of unknown function (DUF915)
GAPBOOJH_00298 2.3e-232 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GAPBOOJH_00299 3.9e-116 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
GAPBOOJH_00300 4.4e-230 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
GAPBOOJH_00301 2.2e-128 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
GAPBOOJH_00302 2.1e-144 p75 M NlpC P60 family protein
GAPBOOJH_00303 4.7e-260 nox 1.6.3.4 C NADH oxidase
GAPBOOJH_00304 2e-258 lacE-1 2.7.1.196, 2.7.1.205, 2.7.1.207 G Phosphotransferase system, EIIC
GAPBOOJH_00305 7.8e-144 K CAT RNA binding domain
GAPBOOJH_00306 5.2e-57 lacF 2.7.1.196, 2.7.1.205, 2.7.1.207 G PTS system, Lactose/Cellobiose specific IIA subunit
GAPBOOJH_00307 1.2e-234 lacG 3.2.1.85 G Belongs to the glycosyl hydrolase 1 family
GAPBOOJH_00308 4.8e-154 sepS16B
GAPBOOJH_00309 1.1e-116
GAPBOOJH_00310 0.0 dinG 3.1.12.1, 3.6.4.12 KL DEAD_2
GAPBOOJH_00311 2.1e-238 malE G Bacterial extracellular solute-binding protein
GAPBOOJH_00312 1.7e-82
GAPBOOJH_00313 2.6e-296 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GAPBOOJH_00314 3.1e-67 frvA 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GAPBOOJH_00315 5.7e-240 manP 2.7.1.191, 2.7.1.202 G phosphotransferase system
GAPBOOJH_00316 3.7e-195 manA 5.3.1.8 G mannose-6-phosphate isomerase
GAPBOOJH_00317 3.8e-129 XK27_08435 K UTRA
GAPBOOJH_00318 5.9e-219 agaS G SIS domain
GAPBOOJH_00319 4.1e-225 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
GAPBOOJH_00320 0.0 bgaC 3.2.1.23 G Glycosyl hydrolases family 35
GAPBOOJH_00321 8.1e-82 manX_1 2.7.1.191 G PTS system sorbose subfamily IIB component
GAPBOOJH_00322 1.5e-140 XK27_08455 G PTS system sorbose-specific iic component
GAPBOOJH_00323 1e-145 manZ_1 G PTS system mannose/fructose/sorbose family IID component
GAPBOOJH_00324 3.5e-64 XK27_08465 2.7.1.191 G PTS system fructose IIA component
GAPBOOJH_00325 1.5e-294 2.4.1.52 GT4 M Glycosyl transferases group 1
GAPBOOJH_00326 2.2e-311 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
GAPBOOJH_00327 4.9e-219 S Uncharacterized protein conserved in bacteria (DUF2325)
GAPBOOJH_00328 6.8e-231 4.4.1.8 E Aminotransferase, class I
GAPBOOJH_00329 5.1e-201 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
GAPBOOJH_00330 2.7e-252 2.7.1.207 U The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GAPBOOJH_00331 1.8e-59 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
GAPBOOJH_00332 1.9e-47 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
GAPBOOJH_00333 5.8e-194 ypdE E M42 glutamyl aminopeptidase
GAPBOOJH_00334 0.0 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GAPBOOJH_00335 3.6e-235 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
GAPBOOJH_00336 3.2e-292 E ABC transporter, substratebinding protein
GAPBOOJH_00337 2.9e-119 S Acetyltransferase (GNAT) family
GAPBOOJH_00339 1.2e-139 nisT V ABC transporter
GAPBOOJH_00340 1.2e-101 nisT V ABC transporter
GAPBOOJH_00341 5.8e-33
GAPBOOJH_00342 1.1e-192 L Transposase and inactivated derivatives, IS30 family
GAPBOOJH_00343 1.1e-27
GAPBOOJH_00344 5.7e-95 S ABC-type cobalt transport system, permease component
GAPBOOJH_00345 1.3e-243 P ABC transporter
GAPBOOJH_00346 1.9e-110 P cobalt transport
GAPBOOJH_00347 1.7e-125 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
GAPBOOJH_00348 1.1e-81 thiW S Thiamine-precursor transporter protein (ThiW)
GAPBOOJH_00349 4.1e-150 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
GAPBOOJH_00350 1.6e-101 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
GAPBOOJH_00351 3.2e-150 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
GAPBOOJH_00352 2.1e-271 E Amino acid permease
GAPBOOJH_00353 9.7e-186 rbsR K Periplasmic binding proteins and sugar binding domain of LacI family
GAPBOOJH_00354 8.3e-61 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
GAPBOOJH_00355 1.3e-269 rbsA 3.6.3.17 G ABC transporter
GAPBOOJH_00356 1e-152 rbsC U Belongs to the binding-protein-dependent transport system permease family
GAPBOOJH_00357 4.3e-159 rbsB G Periplasmic binding protein domain
GAPBOOJH_00358 6.2e-163 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GAPBOOJH_00359 1.8e-42 K DNA-binding helix-turn-helix protein
GAPBOOJH_00360 2.5e-36
GAPBOOJH_00365 4.8e-143 S Protein of unknown function (DUF2785)
GAPBOOJH_00366 0.0 pbpC M NTF2-like N-terminal transpeptidase domain
GAPBOOJH_00367 5.5e-52
GAPBOOJH_00368 7.1e-86 V AAA domain, putative AbiEii toxin, Type IV TA system
GAPBOOJH_00369 2.5e-70
GAPBOOJH_00370 4.5e-62
GAPBOOJH_00371 2.3e-94
GAPBOOJH_00372 1.3e-77 ydiC1 EGP Major facilitator Superfamily
GAPBOOJH_00373 1.9e-122 ydiC1 EGP Major facilitator Superfamily
GAPBOOJH_00374 2.3e-67 K helix_turn_helix multiple antibiotic resistance protein
GAPBOOJH_00375 3.9e-104
GAPBOOJH_00376 1e-28
GAPBOOJH_00377 6.7e-165 GKT transcriptional antiterminator
GAPBOOJH_00378 6e-46 ptxB 2.7.1.194, 2.7.1.200, 2.7.1.204 G PTS system, Lactose/Cellobiose specific IIB subunit
GAPBOOJH_00379 1.4e-205 ulaA 2.7.1.194 S PTS system sugar-specific permease component
GAPBOOJH_00380 3.9e-48
GAPBOOJH_00381 3.2e-150 4.1.2.13 G Fructose-bisphosphate aldolase class-II
GAPBOOJH_00382 3.8e-87 6.3.4.4 S Zeta toxin
GAPBOOJH_00383 2.1e-155 rihB 3.2.2.1 F Nucleoside
GAPBOOJH_00384 1.3e-212 dcuD C Tripartite ATP-independent periplasmic transporter, DctM component
GAPBOOJH_00385 1.4e-44 K Acetyltransferase (GNAT) family
GAPBOOJH_00386 6.3e-118 K helix_turn_helix gluconate operon transcriptional repressor
GAPBOOJH_00387 1.1e-88 4.1.2.13 G DeoC/LacD family aldolase
GAPBOOJH_00388 9.9e-39 glpP K Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
GAPBOOJH_00389 1.1e-180 2.7.1.53 G Belongs to the FGGY kinase family
GAPBOOJH_00390 1.4e-91 IQ KR domain
GAPBOOJH_00391 2.5e-125 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
GAPBOOJH_00392 2e-156 gatC G COG3775 Phosphotransferase system, galactitol-specific IIC component
GAPBOOJH_00393 3e-286 K Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GAPBOOJH_00394 6.4e-154 4.1.2.13 G Fructose-bisphosphate aldolase class-II
GAPBOOJH_00395 0.0 fruA 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 G phosphotransferase system
GAPBOOJH_00396 5.4e-239 sorE E Alcohol dehydrogenase GroES-like domain
GAPBOOJH_00397 1.4e-162 sorC K sugar-binding domain protein
GAPBOOJH_00398 4.1e-131 IQ NAD dependent epimerase/dehydratase family
GAPBOOJH_00399 3.6e-62 sorF 2.7.1.191, 2.7.1.206 G PTS system fructose IIA component
GAPBOOJH_00400 1.9e-78 sorB 2.7.1.191, 2.7.1.206 G PTS system sorbose subfamily IIB component
GAPBOOJH_00401 3.6e-130 sorA U PTS system sorbose-specific iic component
GAPBOOJH_00402 1.2e-149 sorM G system, mannose fructose sorbose family IID component
GAPBOOJH_00403 4.9e-149 4.1.2.13 G Fructose-bisphosphate aldolase class-II
GAPBOOJH_00404 1.4e-238 P transporter
GAPBOOJH_00405 1.2e-172 C FAD dependent oxidoreductase
GAPBOOJH_00406 4.9e-109 K Transcriptional regulator, LysR family
GAPBOOJH_00407 1.1e-158 salL 2.5.1.63, 2.5.1.94 K S-adenosyl-l-methionine hydroxide adenosyltransferase
GAPBOOJH_00408 2.7e-97 S UPF0397 protein
GAPBOOJH_00409 0.0 3.6.3.24 P ATP-binding cassette cobalt transporter
GAPBOOJH_00410 1.8e-145 cbiQ P cobalt transport
GAPBOOJH_00411 1e-150 K Transcriptional regulator, LacI family
GAPBOOJH_00412 4.7e-244 G Major Facilitator
GAPBOOJH_00413 2.7e-47 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
GAPBOOJH_00414 3e-235 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
GAPBOOJH_00415 2.2e-250 frdC 1.3.5.4 C HI0933-like protein
GAPBOOJH_00416 2.9e-97 4.1.2.17 G Class II Aldolase and Adducin N-terminal domain
GAPBOOJH_00418 4.8e-188 pts36C G iic component
GAPBOOJH_00419 8.1e-09 sgcB 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
GAPBOOJH_00420 4.1e-30 pts36A 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GAPBOOJH_00421 5.9e-63 K DeoR C terminal sensor domain
GAPBOOJH_00422 1.3e-54 lacC 2.7.1.11, 2.7.1.144, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
GAPBOOJH_00423 1.1e-57 gntR K rpiR family
GAPBOOJH_00424 3.3e-37 2.7.1.194, 2.7.1.197, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GAPBOOJH_00425 4e-168 S PTS system sugar-specific permease component
GAPBOOJH_00426 1.9e-25 2.7.1.194 G protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GAPBOOJH_00427 2.2e-132 S N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity
GAPBOOJH_00428 9.3e-67 XK27_02985 S Sucrose-6F-phosphate phosphohydrolase
GAPBOOJH_00429 6.6e-219 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
GAPBOOJH_00430 1.6e-210 glvC 2.7.1.199, 2.7.1.208 G phosphotransferase system, EIIB
GAPBOOJH_00431 3.2e-38 glvR K Helix-turn-helix domain, rpiR family
GAPBOOJH_00433 2.8e-20 glvC 2.7.1.199, 2.7.1.208 G phosphotransferase system, EIIB
GAPBOOJH_00434 3e-44 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GAPBOOJH_00435 9.4e-52 5.4.2.6 S Haloacid dehalogenase-like hydrolase
GAPBOOJH_00436 7.5e-91 K antiterminator
GAPBOOJH_00437 1.2e-234 bglF 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
GAPBOOJH_00438 2e-232 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GAPBOOJH_00439 1.1e-230 manR K PRD domain
GAPBOOJH_00440 3.1e-30 ptsN 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 G phosphoenolpyruvate-dependent sugar phosphotransferase system
GAPBOOJH_00441 1.9e-167 4.1.2.13 G Fructose-bisphosphate aldolase class-II
GAPBOOJH_00442 8e-66 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GAPBOOJH_00443 5.7e-44 fruA 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
GAPBOOJH_00444 1.2e-162 G Phosphotransferase System
GAPBOOJH_00445 6.3e-126 G Domain of unknown function (DUF4432)
GAPBOOJH_00446 2.4e-111 5.3.1.15 S Pfam:DUF1498
GAPBOOJH_00447 6.4e-199 xylB 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
GAPBOOJH_00448 9.6e-188 2.7.1.199, 2.7.1.208 G pts system
GAPBOOJH_00449 2.5e-85 celG 3.5.1.105 G Probably catalyzes the deacetylation of acetylated carbohydrates an important step in the degradation of oligosaccharides
GAPBOOJH_00450 7.8e-175 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase
GAPBOOJH_00451 1.2e-28 glvR K DNA-binding transcription factor activity
GAPBOOJH_00452 7.2e-61 ptsN 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GAPBOOJH_00453 9e-268 frvB 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
GAPBOOJH_00454 2.2e-189 malY 4.4.1.8 E Aminotransferase class I and II
GAPBOOJH_00455 1.1e-218 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GAPBOOJH_00456 9.6e-64 kdsD 5.3.1.13 M SIS domain
GAPBOOJH_00457 9.9e-45 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GAPBOOJH_00458 3e-31 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
GAPBOOJH_00459 4.3e-183 ulaA 2.7.1.194 S PTS system sugar-specific permease component
GAPBOOJH_00460 7e-87 4.3.3.7 E Dihydrodipicolinate synthetase family
GAPBOOJH_00461 5.8e-72 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
GAPBOOJH_00462 9.6e-199 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GAPBOOJH_00463 2.4e-18 hxlR K Transcriptional regulator, HxlR family
GAPBOOJH_00464 6.7e-58 pnb C nitroreductase
GAPBOOJH_00465 3.3e-119
GAPBOOJH_00466 8.7e-08 K DNA-templated transcription, initiation
GAPBOOJH_00467 1.3e-17 S YvrJ protein family
GAPBOOJH_00468 4.8e-145 yqfZ 3.2.1.17 M hydrolase, family 25
GAPBOOJH_00469 9.6e-86 ygfC K Bacterial regulatory proteins, tetR family
GAPBOOJH_00470 1.1e-184 hrtB V ABC transporter permease
GAPBOOJH_00471 3.7e-120 devA 3.6.3.25 V ABC transporter, ATP-binding protein
GAPBOOJH_00472 1.1e-261 npr 1.11.1.1 C NADH oxidase
GAPBOOJH_00473 3.7e-151 S hydrolase
GAPBOOJH_00474 7.6e-45 S Bacterial toxin of type II toxin-antitoxin system, YafQ
GAPBOOJH_00475 4.6e-164 cytR 5.1.1.1 K Periplasmic binding proteins and sugar binding domain of LacI family
GAPBOOJH_00476 3.3e-75 2.7.1.191 G PTS system sorbose subfamily IIB component
GAPBOOJH_00477 7.6e-125 G PTS system sorbose-specific iic component
GAPBOOJH_00478 2.3e-145 G PTS system mannose/fructose/sorbose family IID component
GAPBOOJH_00479 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
GAPBOOJH_00480 4e-61 2.7.1.191 G PTS system fructose IIA component
GAPBOOJH_00481 2.3e-309 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
GAPBOOJH_00482 1.9e-136 2.7.7.47 H Mediates bacterial resistance to the antibiotics streptomycin and spectomycin
GAPBOOJH_00484 3.5e-22
GAPBOOJH_00487 1.9e-150 metQ_4 P Belongs to the nlpA lipoprotein family
GAPBOOJH_00488 3.5e-196 pac 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
GAPBOOJH_00489 3.1e-173
GAPBOOJH_00490 0.0 lai 4.2.1.53 S Myosin-crossreactive antigen
GAPBOOJH_00491 9.4e-17
GAPBOOJH_00492 4e-104 K Bacterial regulatory proteins, tetR family
GAPBOOJH_00493 9.6e-59 dhaM 2.7.1.121 S PTS system fructose IIA component
GAPBOOJH_00494 1e-102 dhaL 2.7.1.121 S Dak2
GAPBOOJH_00495 6.1e-188 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
GAPBOOJH_00496 1.2e-76 ohr O OsmC-like protein
GAPBOOJH_00497 5.6e-20
GAPBOOJH_00498 5.9e-13
GAPBOOJH_00500 1.5e-54
GAPBOOJH_00501 8.3e-252 L Exonuclease
GAPBOOJH_00502 6.5e-28 relB L RelB antitoxin
GAPBOOJH_00503 7e-29
GAPBOOJH_00504 1.2e-48 K Helix-turn-helix domain
GAPBOOJH_00505 4.8e-205 yceJ EGP Major facilitator Superfamily
GAPBOOJH_00506 5.2e-104 tag 3.2.2.20 L glycosylase
GAPBOOJH_00507 2.5e-77 L Resolvase, N-terminal
GAPBOOJH_00508 2.3e-215 tnpB L Putative transposase DNA-binding domain
GAPBOOJH_00510 9.1e-33
GAPBOOJH_00511 2.6e-266 L Transposase DDE domain
GAPBOOJH_00512 1e-167 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
GAPBOOJH_00513 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
GAPBOOJH_00514 6.1e-45
GAPBOOJH_00515 8.2e-153 V Beta-lactamase
GAPBOOJH_00516 7.3e-192 ykfB 5.1.1.20 M Belongs to the mandelate racemase muconate lactonizing enzyme family
GAPBOOJH_00517 6e-137 H Protein of unknown function (DUF1698)
GAPBOOJH_00518 1.7e-140 puuD S peptidase C26
GAPBOOJH_00519 3.5e-107 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
GAPBOOJH_00520 1.3e-78 K Psort location Cytoplasmic, score
GAPBOOJH_00521 2.1e-257 6.3.1.2 E Glutamine synthetase N-terminal domain
GAPBOOJH_00522 3.6e-221 S Amidohydrolase
GAPBOOJH_00523 8e-227 E Amino acid permease
GAPBOOJH_00524 2.5e-74 K helix_turn_helix, mercury resistance
GAPBOOJH_00525 6.4e-162 morA2 S reductase
GAPBOOJH_00526 2.8e-193 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
GAPBOOJH_00527 4e-59 hxlR K Transcriptional regulator, HxlR family
GAPBOOJH_00528 1.5e-127 S membrane transporter protein
GAPBOOJH_00529 3.6e-197
GAPBOOJH_00530 4.6e-129 XK27_12140 V ATPases associated with a variety of cellular activities
GAPBOOJH_00531 5e-293 S Psort location CytoplasmicMembrane, score
GAPBOOJH_00532 2e-126 K Transcriptional regulatory protein, C terminal
GAPBOOJH_00533 5.1e-196 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
GAPBOOJH_00534 1.9e-161 V ATPases associated with a variety of cellular activities
GAPBOOJH_00535 9.3e-198
GAPBOOJH_00536 1.4e-105
GAPBOOJH_00537 0.0 pepN 3.4.11.2 E aminopeptidase
GAPBOOJH_00538 2.4e-275 ycaM E amino acid
GAPBOOJH_00539 6.4e-238 G MFS/sugar transport protein
GAPBOOJH_00540 6e-72 S Protein of unknown function (DUF1440)
GAPBOOJH_00541 2.3e-161 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
GAPBOOJH_00542 1e-173 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
GAPBOOJH_00544 7.2e-141
GAPBOOJH_00546 9.7e-211 metC 4.4.1.8 E cystathionine
GAPBOOJH_00547 2.8e-143 tcyA ET Belongs to the bacterial solute-binding protein 3 family
GAPBOOJH_00548 2.2e-120 tcyB E ABC transporter
GAPBOOJH_00549 2.2e-117
GAPBOOJH_00550 1.5e-253 brnQ U Component of the transport system for branched-chain amino acids
GAPBOOJH_00551 4.1e-76 S WxL domain surface cell wall-binding
GAPBOOJH_00552 1e-174 S Cell surface protein
GAPBOOJH_00553 1.2e-42
GAPBOOJH_00554 3.1e-247 XK27_00720 S Leucine-rich repeat (LRR) protein
GAPBOOJH_00556 5e-120 S WxL domain surface cell wall-binding
GAPBOOJH_00557 4.5e-56
GAPBOOJH_00558 3e-114 N WxL domain surface cell wall-binding
GAPBOOJH_00559 0.0 XK27_00720 S Leucine-rich repeat (LRR) protein
GAPBOOJH_00560 1.6e-166 yicL EG EamA-like transporter family
GAPBOOJH_00561 4.4e-300
GAPBOOJH_00562 8.5e-145 CcmA5 V ABC transporter
GAPBOOJH_00563 6.2e-78 S ECF-type riboflavin transporter, S component
GAPBOOJH_00564 6.7e-145 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
GAPBOOJH_00565 5.2e-164 metF 1.5.1.20 C Methylenetetrahydrofolate reductase
GAPBOOJH_00566 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GAPBOOJH_00567 0.0 XK27_09600 V ABC transporter, ATP-binding protein
GAPBOOJH_00568 0.0 V ABC transporter
GAPBOOJH_00569 4.7e-219 oxlT P Major Facilitator Superfamily
GAPBOOJH_00570 3.2e-127 treR K UTRA
GAPBOOJH_00571 0.0 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
GAPBOOJH_00572 0.0 treB 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
GAPBOOJH_00573 6.9e-213 sstT U Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
GAPBOOJH_00574 1.2e-269 yfnA E Amino Acid
GAPBOOJH_00575 4.3e-172 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
GAPBOOJH_00576 9.6e-250 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
GAPBOOJH_00577 4.6e-31 K 'Cold-shock' DNA-binding domain
GAPBOOJH_00578 1.3e-70
GAPBOOJH_00579 3.5e-76 O OsmC-like protein
GAPBOOJH_00580 1.5e-283 lsa S ABC transporter
GAPBOOJH_00581 3.9e-113 ylbE GM NAD(P)H-binding
GAPBOOJH_00582 3.7e-160 yeaE S Aldo/keto reductase family
GAPBOOJH_00583 7.1e-256 yifK E Amino acid permease
GAPBOOJH_00584 2.8e-283 S Protein of unknown function (DUF3800)
GAPBOOJH_00585 0.0 yjcE P Sodium proton antiporter
GAPBOOJH_00586 3.2e-55 S Protein of unknown function (DUF3021)
GAPBOOJH_00587 2.8e-68 K LytTr DNA-binding domain
GAPBOOJH_00588 6.4e-146 cylB V ABC-2 type transporter
GAPBOOJH_00589 1.7e-157 cylA V ABC transporter
GAPBOOJH_00590 2.6e-146 S Alpha/beta hydrolase of unknown function (DUF915)
GAPBOOJH_00591 6.9e-113 cah 4.2.1.1 P Eukaryotic-type carbonic anhydrase
GAPBOOJH_00592 1.2e-52 ybjQ S Belongs to the UPF0145 family
GAPBOOJH_00593 1.1e-92 nudC 1.3.7.1, 3.6.1.22 L NUDIX domain
GAPBOOJH_00594 2e-158 3.5.1.10 C nadph quinone reductase
GAPBOOJH_00595 2.2e-243 amt P ammonium transporter
GAPBOOJH_00596 4e-178 yfeX P Peroxidase
GAPBOOJH_00597 1.5e-118 yhiD S MgtC family
GAPBOOJH_00598 9.3e-147 F DNA RNA non-specific endonuclease
GAPBOOJH_00600 1.2e-10
GAPBOOJH_00601 2.3e-311 ybiT S ABC transporter, ATP-binding protein
GAPBOOJH_00602 2.7e-273 mutS L ATPase domain of DNA mismatch repair MUTS family
GAPBOOJH_00603 2e-111 ung2 3.2.2.27 L Uracil-DNA glycosylase
GAPBOOJH_00604 3.3e-132 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GAPBOOJH_00605 0.0 glpD 1.1.3.21, 1.1.5.3 C C-terminal domain of alpha-glycerophosphate oxidase
GAPBOOJH_00606 1.1e-294 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
GAPBOOJH_00607 3.3e-135 epsG 2.4.1.293 GT2 M Glycosyltransferase like family 2
GAPBOOJH_00608 6.5e-138 lacT K PRD domain
GAPBOOJH_00609 0.0 celB 2.7.1.196, 2.7.1.205, 2.7.1.207 G Phosphotransferase system, EIIC
GAPBOOJH_00610 6.2e-247 lacG 3.2.1.85 G Belongs to the glycosyl hydrolase 1 family
GAPBOOJH_00611 1.9e-50 lacF 2.7.1.196, 2.7.1.205, 2.7.1.207 G PTS system, Lactose/Cellobiose specific IIA subunit
GAPBOOJH_00613 6.2e-221 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
GAPBOOJH_00614 2.1e-193 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
GAPBOOJH_00615 6.5e-284 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
GAPBOOJH_00616 1.5e-162 K Transcriptional regulator
GAPBOOJH_00617 1.4e-192 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
GAPBOOJH_00619 3.3e-70 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GAPBOOJH_00620 1.7e-48 2.7.1.200, 2.7.1.204 G PTS system, Lactose/Cellobiose specific IIB subunit
GAPBOOJH_00621 2.3e-249 gatC G PTS system sugar-specific permease component
GAPBOOJH_00623 1.7e-28
GAPBOOJH_00624 8e-188 V Beta-lactamase
GAPBOOJH_00625 1.3e-125 S Domain of unknown function (DUF4867)
GAPBOOJH_00626 3.2e-175 lacC 2.7.1.11, 2.7.1.144, 2.7.1.56 H pfkB family carbohydrate kinase
GAPBOOJH_00627 5.6e-186 yihT 4.1.2.40, 4.1.2.57 G Belongs to the aldolase LacD family
GAPBOOJH_00628 9.9e-94 rpiB 2.1.1.222, 2.1.1.64, 5.3.1.26, 5.3.1.6 G Ribose/Galactose Isomerase
GAPBOOJH_00629 6.1e-73 lacA 5.3.1.26 G Ribose/Galactose Isomerase
GAPBOOJH_00630 1.9e-141 lacR K DeoR C terminal sensor domain
GAPBOOJH_00631 3.6e-114 gph 3.1.3.18 S HAD hydrolase, family IA, variant
GAPBOOJH_00632 4.3e-211 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
GAPBOOJH_00633 0.0 sbcC L Putative exonuclease SbcCD, C subunit
GAPBOOJH_00634 6e-09
GAPBOOJH_00635 3.1e-86 hsp1 O Belongs to the small heat shock protein (HSP20) family
GAPBOOJH_00636 7.5e-209 mutY L A G-specific adenine glycosylase
GAPBOOJH_00637 7.4e-149 cytC6 I alpha/beta hydrolase fold
GAPBOOJH_00638 5.9e-121 yrkL S Flavodoxin-like fold
GAPBOOJH_00640 1.7e-88 S Short repeat of unknown function (DUF308)
GAPBOOJH_00641 1.9e-152 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
GAPBOOJH_00642 2.7e-199
GAPBOOJH_00643 1.5e-06
GAPBOOJH_00644 5.2e-116 ywnB S NmrA-like family
GAPBOOJH_00645 1.1e-192 L Transposase and inactivated derivatives, IS30 family
GAPBOOJH_00646 0.0 bglB 3.2.1.21 GH3 G hydrolase, family 3
GAPBOOJH_00648 8e-166 XK27_00670 S ABC transporter substrate binding protein
GAPBOOJH_00649 1.2e-164 XK27_00670 S ABC transporter
GAPBOOJH_00650 7.6e-156 WQ51_06230 U Belongs to the binding-protein-dependent transport system permease family
GAPBOOJH_00651 5.2e-142 cmpC S ABC transporter, ATP-binding protein
GAPBOOJH_00652 4.9e-171 yhfP 1.1.1.1 C Zinc-binding dehydrogenase
GAPBOOJH_00653 0.0 pacL3 3.6.3.8 P Cation transporter/ATPase, N-terminus
GAPBOOJH_00654 9.6e-183 ykcC GT2 M Glycosyl transferase family 2
GAPBOOJH_00655 0.0 ykcB M Dolichyl-phosphate-mannose-protein mannosyltransferase
GAPBOOJH_00656 6.4e-72 S GtrA-like protein
GAPBOOJH_00657 1.7e-09
GAPBOOJH_00658 2.8e-08
GAPBOOJH_00659 2.2e-128 K cheY-homologous receiver domain
GAPBOOJH_00660 3.9e-240 ciaH 2.7.13.3 T His Kinase A (phosphoacceptor) domain
GAPBOOJH_00661 1.2e-67 yqkB S Belongs to the HesB IscA family
GAPBOOJH_00662 1.9e-121 drgA C Nitroreductase family
GAPBOOJH_00663 2.9e-204 lctO C IMP dehydrogenase / GMP reductase domain
GAPBOOJH_00666 6.4e-07 Z012_04635 K Helix-turn-helix domain
GAPBOOJH_00668 4.2e-06 mutR K Helix-turn-helix
GAPBOOJH_00670 1.4e-181 K sequence-specific DNA binding
GAPBOOJH_00671 3.1e-56 K Transcriptional regulator PadR-like family
GAPBOOJH_00672 4e-42 ygbF S Sugar efflux transporter for intercellular exchange
GAPBOOJH_00673 2.5e-49
GAPBOOJH_00674 1.1e-184 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
GAPBOOJH_00675 3.4e-56
GAPBOOJH_00676 3.4e-80
GAPBOOJH_00677 2.3e-207 yubA S AI-2E family transporter
GAPBOOJH_00678 7.4e-26
GAPBOOJH_00679 3e-97 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GAPBOOJH_00680 2.1e-74
GAPBOOJH_00681 2.9e-168 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
GAPBOOJH_00682 1.5e-104 ywrF S Flavin reductase like domain
GAPBOOJH_00683 6.7e-96
GAPBOOJH_00684 1.4e-104 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
GAPBOOJH_00685 3.3e-61 yeaO S Protein of unknown function, DUF488
GAPBOOJH_00686 6.6e-173 corA P CorA-like Mg2+ transporter protein
GAPBOOJH_00687 2.1e-160 mleR K LysR family
GAPBOOJH_00688 0.0 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
GAPBOOJH_00689 1.1e-170 mleP S Sodium Bile acid symporter family
GAPBOOJH_00690 5.9e-88 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
GAPBOOJH_00691 3.1e-95
GAPBOOJH_00692 6e-169 K sequence-specific DNA binding
GAPBOOJH_00693 1.7e-282 V ABC transporter transmembrane region
GAPBOOJH_00694 0.0 pepF E Oligopeptidase F
GAPBOOJH_00695 5e-78 ndk 2.7.4.6 F Belongs to the NDK family
GAPBOOJH_00696 1.3e-54
GAPBOOJH_00697 0.0 yfgQ P E1-E2 ATPase
GAPBOOJH_00698 8.8e-178 3.4.11.5 I Releases the N-terminal proline from various substrates
GAPBOOJH_00699 1.8e-59
GAPBOOJH_00700 4.6e-94 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GAPBOOJH_00701 3.6e-197 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
GAPBOOJH_00702 1.6e-120 gph 3.1.3.18 S haloacid dehalogenase-like hydrolase
GAPBOOJH_00703 1.5e-77 K Transcriptional regulator
GAPBOOJH_00704 3.6e-179 D Alpha beta
GAPBOOJH_00705 1.3e-84 nrdI F Belongs to the NrdI family
GAPBOOJH_00706 1.5e-157 dkgB S reductase
GAPBOOJH_00707 1.1e-120
GAPBOOJH_00708 3.4e-160 S Alpha beta hydrolase
GAPBOOJH_00709 2.3e-116 yviA S Protein of unknown function (DUF421)
GAPBOOJH_00710 3.5e-74 S Protein of unknown function (DUF3290)
GAPBOOJH_00711 6.7e-220 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
GAPBOOJH_00712 1.6e-87 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
GAPBOOJH_00713 4.6e-103 yjbF S SNARE associated Golgi protein
GAPBOOJH_00714 3.9e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
GAPBOOJH_00715 6.2e-196 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
GAPBOOJH_00716 9.5e-208 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
GAPBOOJH_00717 3.9e-228 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
GAPBOOJH_00718 3.9e-48 yajC U Preprotein translocase
GAPBOOJH_00719 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
GAPBOOJH_00720 3.9e-116 sirR K Helix-turn-helix diphteria tox regulatory element
GAPBOOJH_00721 1.1e-289 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GAPBOOJH_00722 3.1e-206 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GAPBOOJH_00723 5.2e-240 ytoI K DRTGG domain
GAPBOOJH_00724 4.8e-179 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
GAPBOOJH_00725 5.6e-250 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
GAPBOOJH_00726 1.4e-170
GAPBOOJH_00728 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GAPBOOJH_00729 2.3e-201
GAPBOOJH_00730 1.2e-42 yrzL S Belongs to the UPF0297 family
GAPBOOJH_00731 2.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GAPBOOJH_00732 2.3e-53 yrzB S Belongs to the UPF0473 family
GAPBOOJH_00733 2e-36 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
GAPBOOJH_00734 8.6e-93 cvpA S Colicin V production protein
GAPBOOJH_00735 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
GAPBOOJH_00736 6.6e-53 trxA O Belongs to the thioredoxin family
GAPBOOJH_00737 9.4e-294 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GAPBOOJH_00738 1.8e-239 dltB M MBOAT, membrane-bound O-acyltransferase family
GAPBOOJH_00739 4e-37 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GAPBOOJH_00740 1.2e-246 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
GAPBOOJH_00741 1.1e-83 yslB S Protein of unknown function (DUF2507)
GAPBOOJH_00742 2.6e-277 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
GAPBOOJH_00743 2.4e-95 S Phosphoesterase
GAPBOOJH_00744 8.9e-133 gla U Major intrinsic protein
GAPBOOJH_00745 8.7e-84 ykuL S CBS domain
GAPBOOJH_00746 4.2e-156 XK27_00890 S Domain of unknown function (DUF368)
GAPBOOJH_00747 1.2e-155 ykuT M mechanosensitive ion channel
GAPBOOJH_00750 4.9e-74 ytxH S YtxH-like protein
GAPBOOJH_00751 1.9e-92 niaR S 3H domain
GAPBOOJH_00752 7.5e-216 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
GAPBOOJH_00753 2.3e-179 ccpA K catabolite control protein A
GAPBOOJH_00754 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M Penicillin binding protein transpeptidase domain
GAPBOOJH_00755 1.9e-07
GAPBOOJH_00756 5.2e-127 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S HAD-hyrolase-like
GAPBOOJH_00757 2.6e-135 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
GAPBOOJH_00758 4.2e-272 pepV 3.5.1.18 E dipeptidase PepV
GAPBOOJH_00759 6.8e-256 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
GAPBOOJH_00760 2.1e-54
GAPBOOJH_00761 6.4e-188 yibE S overlaps another CDS with the same product name
GAPBOOJH_00762 5.9e-116 yibF S overlaps another CDS with the same product name
GAPBOOJH_00763 1.8e-115 S Calcineurin-like phosphoesterase
GAPBOOJH_00764 2.2e-265 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
GAPBOOJH_00765 8.8e-110 yutD S Protein of unknown function (DUF1027)
GAPBOOJH_00766 1.7e-145 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
GAPBOOJH_00767 5.6e-115 S Protein of unknown function (DUF1461)
GAPBOOJH_00768 2.3e-116 dedA S SNARE-like domain protein
GAPBOOJH_00769 1.5e-86 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
GAPBOOJH_00770 7.9e-185 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
GAPBOOJH_00771 3.8e-110 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GAPBOOJH_00772 1.3e-63 yugI 5.3.1.9 J general stress protein
GAPBOOJH_00773 6.1e-35
GAPBOOJH_00774 2.4e-71 S COG NOG38524 non supervised orthologous group
GAPBOOJH_00775 6.8e-20 S the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts
GAPBOOJH_00801 5.1e-72 sigH K Sigma-70 region 2
GAPBOOJH_00802 1.1e-297 ybeC E amino acid
GAPBOOJH_00803 4.5e-230 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
GAPBOOJH_00804 2.6e-194 cpoA GT4 M Glycosyltransferase, group 1 family protein
GAPBOOJH_00805 2.9e-166 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
GAPBOOJH_00806 1.2e-219 patA 2.6.1.1 E Aminotransferase
GAPBOOJH_00807 5.1e-44 ykuJ S Protein of unknown function (DUF1797)
GAPBOOJH_00808 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GAPBOOJH_00809 5.3e-80 perR P Belongs to the Fur family
GAPBOOJH_00810 6.1e-35
GAPBOOJH_00811 2.4e-71 S COG NOG38524 non supervised orthologous group
GAPBOOJH_00812 6.8e-20 S the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts
GAPBOOJH_00813 9.3e-13
GAPBOOJH_00816 2.7e-213 L Belongs to the 'phage' integrase family
GAPBOOJH_00817 1e-09
GAPBOOJH_00818 4.8e-21
GAPBOOJH_00819 1.1e-97 3.1.21.3 V Type I restriction modification DNA specificity domain
GAPBOOJH_00820 5.8e-19 3.4.21.88 K Peptidase S24-like
GAPBOOJH_00821 5.1e-39 3.4.21.88 K Helix-turn-helix
GAPBOOJH_00822 3.9e-09 K Helix-turn-helix XRE-family like proteins
GAPBOOJH_00823 1.1e-29 kilA K BRO family, N-terminal domain
GAPBOOJH_00824 3.3e-16 S Phage regulatory protein
GAPBOOJH_00825 5.8e-65 S Phage regulatory protein Rha (Phage_pRha)
GAPBOOJH_00831 6.4e-26 L Helix-turn-helix domain
GAPBOOJH_00832 3.2e-44 S calcium ion binding
GAPBOOJH_00833 3.8e-232 S DNA helicase activity
GAPBOOJH_00836 5.8e-39
GAPBOOJH_00837 3e-65 S magnesium ion binding
GAPBOOJH_00838 7.2e-19
GAPBOOJH_00839 5.4e-26
GAPBOOJH_00840 6.3e-93 S Protein of unknown function (DUF1642)
GAPBOOJH_00842 1.2e-33
GAPBOOJH_00844 9.1e-77
GAPBOOJH_00845 1.4e-12
GAPBOOJH_00846 3.2e-236
GAPBOOJH_00847 8.8e-98 S HNH endonuclease
GAPBOOJH_00848 4.9e-51
GAPBOOJH_00849 2.5e-72 S HNH endonuclease
GAPBOOJH_00850 8.7e-78 S Phage terminase, small subunit
GAPBOOJH_00851 0.0 S Phage Terminase
GAPBOOJH_00853 8.4e-224 S Phage portal protein
GAPBOOJH_00854 2.3e-105 S peptidase activity
GAPBOOJH_00855 6.2e-208 S peptidase activity
GAPBOOJH_00856 8e-22 S peptidase activity
GAPBOOJH_00857 3.6e-26 S Phage gp6-like head-tail connector protein
GAPBOOJH_00858 5.2e-40 S Phage head-tail joining protein
GAPBOOJH_00859 2.9e-66 S exonuclease activity
GAPBOOJH_00860 2.9e-29
GAPBOOJH_00861 9.3e-75 S Pfam:Phage_TTP_1
GAPBOOJH_00862 1.8e-21
GAPBOOJH_00863 0.0 S peptidoglycan catabolic process
GAPBOOJH_00864 7.8e-41 S phage tail
GAPBOOJH_00865 2.7e-51 S Prophage endopeptidase tail
GAPBOOJH_00866 1.2e-56 cotH M CotH kinase protein
GAPBOOJH_00867 6.1e-48
GAPBOOJH_00868 9.8e-44 hol S Bacteriophage holin
GAPBOOJH_00869 2.1e-31
GAPBOOJH_00870 3.5e-203 M Glycosyl hydrolases family 25
GAPBOOJH_00871 6.7e-09 icaC G Acyltransferase family
GAPBOOJH_00872 1.1e-192 L Transposase and inactivated derivatives, IS30 family
GAPBOOJH_00873 2.3e-12 icaC G Acyltransferase family
GAPBOOJH_00875 2.6e-99
GAPBOOJH_00876 1.7e-210 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GAPBOOJH_00877 2.1e-274 emrY EGP Major facilitator Superfamily
GAPBOOJH_00878 1.3e-81 merR K MerR HTH family regulatory protein
GAPBOOJH_00879 3.3e-217 lmrB EGP Major facilitator Superfamily
GAPBOOJH_00880 4.1e-37 lmrB EGP Major facilitator Superfamily
GAPBOOJH_00881 2.1e-113 S Domain of unknown function (DUF4811)
GAPBOOJH_00882 6.7e-119 3.6.1.27 I Acid phosphatase homologues
GAPBOOJH_00883 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
GAPBOOJH_00884 5.4e-279 ytgP S Polysaccharide biosynthesis protein
GAPBOOJH_00885 3.4e-129 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GAPBOOJH_00886 3.3e-35 yhcC S Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
GAPBOOJH_00887 8.9e-137 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GAPBOOJH_00888 2.6e-95 FNV0100 F NUDIX domain
GAPBOOJH_00890 4.8e-87 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
GAPBOOJH_00891 6.7e-226 malY 4.4.1.8 E Aminotransferase, class I
GAPBOOJH_00892 2.9e-222 cpdA S Calcineurin-like phosphoesterase
GAPBOOJH_00893 1.5e-37 gcvR T Belongs to the UPF0237 family
GAPBOOJH_00894 1.3e-243 XK27_08635 S UPF0210 protein
GAPBOOJH_00895 1.1e-211 coiA 3.6.4.12 S Competence protein
GAPBOOJH_00896 1.5e-115 yjbH Q Thioredoxin
GAPBOOJH_00897 1.2e-103 yjbK S CYTH
GAPBOOJH_00898 2.7e-123 yjbM 2.7.6.5 S RelA SpoT domain protein
GAPBOOJH_00899 1.4e-150 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GAPBOOJH_00900 7.1e-172 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
GAPBOOJH_00901 1.2e-202 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GAPBOOJH_00902 1.3e-111 cutC P Participates in the control of copper homeostasis
GAPBOOJH_00903 3e-145 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
GAPBOOJH_00904 2.3e-198 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
GAPBOOJH_00905 1.2e-61 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
GAPBOOJH_00906 3.5e-42 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GAPBOOJH_00907 7.4e-191 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GAPBOOJH_00908 5.7e-172 corA P CorA-like Mg2+ transporter protein
GAPBOOJH_00909 2.4e-153 rrmA 2.1.1.187 H Methyltransferase
GAPBOOJH_00910 1.6e-96 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
GAPBOOJH_00911 5.4e-71 WQ51_03320 S Protein of unknown function (DUF1149)
GAPBOOJH_00912 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
GAPBOOJH_00913 6.1e-230 ymfF S Peptidase M16 inactive domain protein
GAPBOOJH_00914 2.2e-243 ymfH S Peptidase M16
GAPBOOJH_00915 1.1e-127 IQ Enoyl-(Acyl carrier protein) reductase
GAPBOOJH_00916 2e-116 ymfM S Helix-turn-helix domain
GAPBOOJH_00917 1.6e-103 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GAPBOOJH_00918 1.4e-226 cinA 3.5.1.42 S Belongs to the CinA family
GAPBOOJH_00919 1.3e-188 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GAPBOOJH_00920 3.6e-21
GAPBOOJH_00921 1.7e-242 rny S Endoribonuclease that initiates mRNA decay
GAPBOOJH_00922 9.5e-118 yvyE 3.4.13.9 S YigZ family
GAPBOOJH_00923 8.2e-235 comFA L Helicase C-terminal domain protein
GAPBOOJH_00924 1.3e-90 comFC S Competence protein
GAPBOOJH_00925 5.4e-98 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GAPBOOJH_00926 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GAPBOOJH_00927 8.9e-176 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
GAPBOOJH_00928 1.9e-124 ftsE D ABC transporter
GAPBOOJH_00929 1.8e-159 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
GAPBOOJH_00930 3.2e-195 minJ O Domain present in PSD-95, Dlg, and ZO-1/2.
GAPBOOJH_00931 5.2e-130 K response regulator
GAPBOOJH_00932 1.1e-306 phoR 2.7.13.3 T Histidine kinase
GAPBOOJH_00933 4.4e-155 pstS P Phosphate
GAPBOOJH_00934 3.4e-161 pstC P probably responsible for the translocation of the substrate across the membrane
GAPBOOJH_00935 1.1e-156 pstA P Phosphate transport system permease protein PstA
GAPBOOJH_00936 1.2e-149 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GAPBOOJH_00937 7.1e-141 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GAPBOOJH_00938 1e-119 phoU P Plays a role in the regulation of phosphate uptake
GAPBOOJH_00939 4.8e-210 yvlB S Putative adhesin
GAPBOOJH_00940 7.1e-32
GAPBOOJH_00941 1.3e-46 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
GAPBOOJH_00942 2.8e-174 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
GAPBOOJH_00943 1.1e-155 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GAPBOOJH_00944 3.4e-194 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
GAPBOOJH_00945 1.5e-180 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
GAPBOOJH_00946 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
GAPBOOJH_00947 6.8e-84 T Transcriptional regulatory protein, C terminal
GAPBOOJH_00948 8.9e-115 T His Kinase A (phosphoacceptor) domain
GAPBOOJH_00949 1.2e-91 V ABC transporter
GAPBOOJH_00950 1.1e-87 V FtsX-like permease family
GAPBOOJH_00951 6.1e-149 V FtsX-like permease family
GAPBOOJH_00952 5.5e-118 yfbR S HD containing hydrolase-like enzyme
GAPBOOJH_00953 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
GAPBOOJH_00954 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
GAPBOOJH_00955 6.7e-85 S Short repeat of unknown function (DUF308)
GAPBOOJH_00956 1.3e-165 rapZ S Displays ATPase and GTPase activities
GAPBOOJH_00957 1.7e-190 ybhK S Required for morphogenesis under gluconeogenic growth conditions
GAPBOOJH_00958 1.6e-171 whiA K May be required for sporulation
GAPBOOJH_00959 1.7e-35 ohrR K helix_turn_helix multiple antibiotic resistance protein
GAPBOOJH_00960 1.6e-24 ohrR K helix_turn_helix multiple antibiotic resistance protein
GAPBOOJH_00961 2.5e-101 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GAPBOOJH_00963 3.6e-188 cggR K Putative sugar-binding domain
GAPBOOJH_00964 2.2e-193 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
GAPBOOJH_00965 1.5e-222 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
GAPBOOJH_00966 1.7e-139 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GAPBOOJH_00967 3.7e-246 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GAPBOOJH_00968 1.2e-64
GAPBOOJH_00969 3.7e-293 clcA P chloride
GAPBOOJH_00970 1.7e-60
GAPBOOJH_00971 9.3e-31 secG U Preprotein translocase
GAPBOOJH_00972 5.4e-138 est 3.1.1.1 S Serine aminopeptidase, S33
GAPBOOJH_00973 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
GAPBOOJH_00974 3.2e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
GAPBOOJH_00975 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
GAPBOOJH_00976 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
GAPBOOJH_00977 7.7e-115 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S Haloacid dehalogenase-like hydrolase
GAPBOOJH_00978 8.7e-50
GAPBOOJH_00979 9.7e-17
GAPBOOJH_00980 6.6e-237 YSH1 S Metallo-beta-lactamase superfamily
GAPBOOJH_00981 4.4e-239 malE G Bacterial extracellular solute-binding protein
GAPBOOJH_00982 1.9e-147 malF G Binding-protein-dependent transport system inner membrane component
GAPBOOJH_00983 2.6e-166 malG P ABC-type sugar transport systems, permease components
GAPBOOJH_00984 1.7e-193 malK P ATPases associated with a variety of cellular activities
GAPBOOJH_00985 4.4e-103 3.2.2.20 K Acetyltransferase (GNAT) domain
GAPBOOJH_00986 9e-92 yxjI
GAPBOOJH_00987 2e-158 ycsE S Sucrose-6F-phosphate phosphohydrolase
GAPBOOJH_00988 4.6e-131 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GAPBOOJH_00989 8.4e-179 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
GAPBOOJH_00990 4.6e-82 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
GAPBOOJH_00991 5.4e-164 natA S ABC transporter, ATP-binding protein
GAPBOOJH_00992 4.8e-219 ysdA CP ABC-2 family transporter protein
GAPBOOJH_00993 3.1e-98 dnaQ 2.7.7.7 L DNA polymerase III
GAPBOOJH_00994 1.9e-149 xth 3.1.11.2 L exodeoxyribonuclease III
GAPBOOJH_00995 2.6e-166 murB 1.3.1.98 M Cell wall formation
GAPBOOJH_00996 0.0 yjcE P Sodium proton antiporter
GAPBOOJH_00997 2.9e-96 puuR K Cupin domain
GAPBOOJH_00998 4.5e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
GAPBOOJH_00999 1.7e-148 potB P ABC transporter permease
GAPBOOJH_01000 8.9e-145 potC P ABC transporter permease
GAPBOOJH_01001 1.6e-207 potD P ABC transporter
GAPBOOJH_01002 1.1e-80 S Domain of unknown function (DUF5067)
GAPBOOJH_01003 1.1e-59
GAPBOOJH_01005 0.0 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
GAPBOOJH_01006 2.2e-117 K Transcriptional regulator
GAPBOOJH_01007 5.4e-177 V ABC transporter
GAPBOOJH_01008 8.1e-126 V AAA domain, putative AbiEii toxin, Type IV TA system
GAPBOOJH_01009 1e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
GAPBOOJH_01010 1.5e-168 ybbR S YbbR-like protein
GAPBOOJH_01011 9.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GAPBOOJH_01012 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
GAPBOOJH_01013 0.0 pepF2 E Oligopeptidase F
GAPBOOJH_01014 3.3e-91 S VanZ like family
GAPBOOJH_01015 3.4e-132 yebC K Transcriptional regulatory protein
GAPBOOJH_01016 1.3e-133 comGA NU Type II IV secretion system protein
GAPBOOJH_01017 7.5e-164 comGB NU type II secretion system
GAPBOOJH_01018 5.1e-48
GAPBOOJH_01020 1.1e-47
GAPBOOJH_01021 1.1e-80
GAPBOOJH_01022 4.6e-49
GAPBOOJH_01023 7.6e-183 ytxK 2.1.1.72 L N-6 DNA Methylase
GAPBOOJH_01024 1.3e-73
GAPBOOJH_01025 1.2e-247 cycA E Amino acid permease
GAPBOOJH_01026 5.8e-143 arbV 2.3.1.51 I Phosphate acyltransferases
GAPBOOJH_01027 2.1e-162 arbx M Glycosyl transferase family 8
GAPBOOJH_01028 2.2e-179 arbY M family 8
GAPBOOJH_01029 2.9e-162 arbZ I Phosphate acyltransferases
GAPBOOJH_01030 0.0 rafA 3.2.1.22 G alpha-galactosidase
GAPBOOJH_01031 1.4e-212 sip L Belongs to the 'phage' integrase family
GAPBOOJH_01032 3.5e-11 K Cro/C1-type HTH DNA-binding domain
GAPBOOJH_01033 7e-43
GAPBOOJH_01034 1.1e-30
GAPBOOJH_01035 7.9e-11
GAPBOOJH_01036 3.5e-20
GAPBOOJH_01037 1.9e-35
GAPBOOJH_01038 1.3e-24
GAPBOOJH_01039 9.4e-155 L Bifunctional DNA primase/polymerase, N-terminal
GAPBOOJH_01040 6.1e-271 S Virulence-associated protein E
GAPBOOJH_01042 2.8e-79 terS L Phage terminase, small subunit
GAPBOOJH_01043 0.0 terL S overlaps another CDS with the same product name
GAPBOOJH_01044 1.1e-20
GAPBOOJH_01045 5.9e-219 S Phage portal protein
GAPBOOJH_01046 1.4e-268 S Phage capsid family
GAPBOOJH_01047 5.1e-47 S Phage gp6-like head-tail connector protein
GAPBOOJH_01048 1.4e-12 S Phage head-tail joining protein
GAPBOOJH_01049 2.9e-16
GAPBOOJH_01050 2.2e-14 ytgB S Transglycosylase associated protein
GAPBOOJH_01051 5.8e-40 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GAPBOOJH_01053 1.7e-69 S SdpI/YhfL protein family
GAPBOOJH_01054 3.1e-133 K response regulator
GAPBOOJH_01055 7.1e-273 yclK 2.7.13.3 T Histidine kinase
GAPBOOJH_01056 1.3e-93 yhbS S acetyltransferase
GAPBOOJH_01057 7.6e-31
GAPBOOJH_01058 5.2e-72 pheB 5.4.99.5 S Belongs to the UPF0735 family
GAPBOOJH_01059 3.8e-82
GAPBOOJH_01060 5.3e-59
GAPBOOJH_01061 3.8e-251 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
GAPBOOJH_01063 1.5e-185 S response to antibiotic
GAPBOOJH_01064 6.2e-108 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
GAPBOOJH_01065 3.6e-46 yjgN S Bacterial protein of unknown function (DUF898)
GAPBOOJH_01066 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
GAPBOOJH_01067 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GAPBOOJH_01068 6.8e-204 camS S sex pheromone
GAPBOOJH_01069 4.9e-45 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GAPBOOJH_01070 8.8e-265 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
GAPBOOJH_01071 6.1e-279 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GAPBOOJH_01072 1.1e-192 yegS 2.7.1.107 G Lipid kinase
GAPBOOJH_01073 5.7e-250 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GAPBOOJH_01074 4.7e-216 yttB EGP Major facilitator Superfamily
GAPBOOJH_01075 3.5e-146 cof S Sucrose-6F-phosphate phosphohydrolase
GAPBOOJH_01076 1.2e-163 S Polyphosphate nucleotide phosphotransferase, PPK2 family
GAPBOOJH_01077 0.0 pepO 3.4.24.71 O Peptidase family M13
GAPBOOJH_01078 6e-79 K Acetyltransferase (GNAT) domain
GAPBOOJH_01079 4e-164 degV S Uncharacterised protein, DegV family COG1307
GAPBOOJH_01080 5e-120 qmcA O prohibitin homologues
GAPBOOJH_01081 3.2e-29
GAPBOOJH_01082 4e-133 lys M Glycosyl hydrolases family 25
GAPBOOJH_01083 1.1e-59 S Protein of unknown function (DUF1093)
GAPBOOJH_01084 2e-61 S Domain of unknown function (DUF4828)
GAPBOOJH_01085 2.6e-177 mocA S Oxidoreductase
GAPBOOJH_01086 1.7e-235 yfmL 3.6.4.13 L DEAD DEAH box helicase
GAPBOOJH_01087 6.8e-48 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
GAPBOOJH_01088 3.3e-71 S Domain of unknown function (DUF3284)
GAPBOOJH_01090 2.6e-07
GAPBOOJH_01091 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
GAPBOOJH_01092 1.6e-238 pepS E Thermophilic metalloprotease (M29)
GAPBOOJH_01093 2.7e-111 K Bacterial regulatory proteins, tetR family
GAPBOOJH_01096 1.2e-260 S Uncharacterized protein conserved in bacteria (DUF2252)
GAPBOOJH_01097 5.1e-179 yihY S Belongs to the UPF0761 family
GAPBOOJH_01098 1.9e-80 fld C Flavodoxin
GAPBOOJH_01099 2.2e-159 map 3.4.11.18 E Methionine Aminopeptidase
GAPBOOJH_01100 3.4e-194 M Glycosyltransferase like family 2
GAPBOOJH_01102 4.5e-29
GAPBOOJH_01103 2.6e-197 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
GAPBOOJH_01104 3.3e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
GAPBOOJH_01105 2.6e-266 L Transposase DDE domain
GAPBOOJH_01106 9.1e-119 M lipopolysaccharide 3-alpha-galactosyltransferase activity
GAPBOOJH_01107 4.7e-56 M Glycosyl transferase family 8
GAPBOOJH_01108 2.1e-39 M transferase activity, transferring glycosyl groups
GAPBOOJH_01109 6.2e-220 secA2 U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GAPBOOJH_01110 2.2e-287 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GAPBOOJH_01111 1.8e-307 bglH 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
GAPBOOJH_01112 0.0 S Bacterial membrane protein YfhO
GAPBOOJH_01113 3e-304 S Psort location CytoplasmicMembrane, score
GAPBOOJH_01114 1.6e-83 S Fic/DOC family
GAPBOOJH_01115 2.1e-171 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
GAPBOOJH_01116 2.1e-109
GAPBOOJH_01117 3.3e-167 yqjA S Putative aromatic acid exporter C-terminal domain
GAPBOOJH_01118 2.1e-31 cspC K Cold shock protein
GAPBOOJH_01119 2.4e-26 chpR T PFAM SpoVT AbrB
GAPBOOJH_01120 1.4e-81 yvbK 3.1.3.25 K GNAT family
GAPBOOJH_01121 1.3e-108 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
GAPBOOJH_01122 7.9e-100 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
GAPBOOJH_01123 7.3e-242 pbuX F xanthine permease
GAPBOOJH_01124 3e-204 purK2 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GAPBOOJH_01125 1.4e-245 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
GAPBOOJH_01127 1.2e-103
GAPBOOJH_01128 3.4e-32
GAPBOOJH_01129 1.1e-192 L Transposase and inactivated derivatives, IS30 family
GAPBOOJH_01130 6.2e-65
GAPBOOJH_01131 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GAPBOOJH_01132 1.5e-109 vanZ V VanZ like family
GAPBOOJH_01133 2.9e-151 glcU U sugar transport
GAPBOOJH_01134 7.3e-258 pgi 5.3.1.9 G Belongs to the GPI family
GAPBOOJH_01136 5.6e-46 ycnE 3.1.1.29 S Antibiotic biosynthesis monooxygenase
GAPBOOJH_01137 2e-115 F DNA/RNA non-specific endonuclease
GAPBOOJH_01138 5.6e-74 yttA 2.7.13.3 S Pfam Transposase IS66
GAPBOOJH_01139 3.3e-230 wbbX GT2,GT4 M Glycosyl transferases group 1
GAPBOOJH_01140 1.4e-172 yceM 1.1.1.18, 1.1.1.369 S Oxidoreductase family, NAD-binding Rossmann fold
GAPBOOJH_01141 5.8e-85 guaD 3.5.4.12, 3.5.4.3, 3.5.4.33 FJ MafB19-like deaminase
GAPBOOJH_01149 1.2e-17
GAPBOOJH_01150 2.5e-193 yttB EGP Major facilitator Superfamily
GAPBOOJH_01151 2.2e-284 pipD E Dipeptidase
GAPBOOJH_01155 8.7e-09
GAPBOOJH_01156 1e-131 G Phosphoglycerate mutase family
GAPBOOJH_01157 5.4e-121 K Bacterial regulatory proteins, tetR family
GAPBOOJH_01158 0.0 ycfI V ABC transporter, ATP-binding protein
GAPBOOJH_01159 0.0 yfiC V ABC transporter
GAPBOOJH_01160 7.8e-140 S NADPH-dependent FMN reductase
GAPBOOJH_01161 2.3e-164 1.13.11.2 S glyoxalase
GAPBOOJH_01162 2.2e-190 ampC V Beta-lactamase
GAPBOOJH_01163 1.9e-261 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
GAPBOOJH_01164 6e-111 tdk 2.7.1.21 F thymidine kinase
GAPBOOJH_01165 4.8e-191 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GAPBOOJH_01166 2.6e-152 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
GAPBOOJH_01167 1.3e-190 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
GAPBOOJH_01168 2e-233 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
GAPBOOJH_01169 1.3e-111 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GAPBOOJH_01170 3.9e-125 atpB C it plays a direct role in the translocation of protons across the membrane
GAPBOOJH_01171 1.6e-26 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GAPBOOJH_01172 4.7e-37 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GAPBOOJH_01173 2.9e-88 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GAPBOOJH_01174 2.1e-285 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GAPBOOJH_01175 1.2e-163 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GAPBOOJH_01176 4.1e-07 lacC 2.7.1.11, 2.7.1.144, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
GAPBOOJH_01177 1.2e-248 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GAPBOOJH_01178 1.6e-52 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
GAPBOOJH_01179 1.7e-12
GAPBOOJH_01180 6.4e-32 ywzB S Protein of unknown function (DUF1146)
GAPBOOJH_01181 4.5e-180 mbl D Cell shape determining protein MreB Mrl
GAPBOOJH_01182 1.9e-25 epuA S DNA-directed RNA polymerase subunit beta
GAPBOOJH_01183 1.6e-54 yidD S Could be involved in insertion of integral membrane proteins into the membrane
GAPBOOJH_01184 1.3e-31 S Protein of unknown function (DUF2969)
GAPBOOJH_01185 7.6e-222 rodA D Belongs to the SEDS family
GAPBOOJH_01186 1.1e-47 gcvH E glycine cleavage
GAPBOOJH_01187 3.2e-214 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
GAPBOOJH_01188 1.9e-147 P Belongs to the nlpA lipoprotein family
GAPBOOJH_01189 3.8e-148 P Belongs to the nlpA lipoprotein family
GAPBOOJH_01190 2.9e-185 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GAPBOOJH_01191 8.8e-106 metI P ABC transporter permease
GAPBOOJH_01192 1.9e-141 sufC O FeS assembly ATPase SufC
GAPBOOJH_01193 5.9e-191 sufD O FeS assembly protein SufD
GAPBOOJH_01194 5.8e-222 csdA 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GAPBOOJH_01195 2.9e-78 nifU C SUF system FeS assembly protein, NifU family
GAPBOOJH_01196 1.2e-279 sufB O assembly protein SufB
GAPBOOJH_01198 1.8e-26
GAPBOOJH_01199 1.1e-65 yueI S Protein of unknown function (DUF1694)
GAPBOOJH_01200 2e-180 S Protein of unknown function (DUF2785)
GAPBOOJH_01201 4.4e-158 2.3.1.19 K Helix-turn-helix XRE-family like proteins
GAPBOOJH_01202 1.5e-83 usp6 T universal stress protein
GAPBOOJH_01203 1.7e-39
GAPBOOJH_01204 3.3e-237 rarA L recombination factor protein RarA
GAPBOOJH_01205 0.0 6.3.2.2, 6.3.2.4 M Mur ligase middle domain protein
GAPBOOJH_01206 1e-72 yueI S Protein of unknown function (DUF1694)
GAPBOOJH_01207 4.1e-107 yktB S Belongs to the UPF0637 family
GAPBOOJH_01208 2.2e-122 sdaAB 4.3.1.17 E Serine dehydratase beta chain
GAPBOOJH_01209 7.3e-150 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
GAPBOOJH_01210 3e-122 G Phosphoglycerate mutase family
GAPBOOJH_01211 7.3e-155 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GAPBOOJH_01212 1.7e-165 IQ NAD dependent epimerase/dehydratase family
GAPBOOJH_01213 2.7e-137 pnuC H nicotinamide mononucleotide transporter
GAPBOOJH_01214 2.6e-132 dck 2.7.1.74 F deoxynucleoside kinase
GAPBOOJH_01215 1.7e-156 hisK 3.1.3.15 E Histidinol phosphatase and related hydrolases of the PHP family
GAPBOOJH_01216 0.0 oppA E ABC transporter, substratebinding protein
GAPBOOJH_01217 1.8e-151 T GHKL domain
GAPBOOJH_01218 4e-119 T Transcriptional regulatory protein, C terminal
GAPBOOJH_01219 1.9e-167 bcrA V AAA domain, putative AbiEii toxin, Type IV TA system
GAPBOOJH_01220 8.2e-129 S ABC-2 family transporter protein
GAPBOOJH_01221 9.4e-161 K Transcriptional regulator
GAPBOOJH_01222 7.2e-79 yphH S Cupin domain
GAPBOOJH_01223 4.2e-55 yphJ 4.1.1.44 S Carboxymuconolactone decarboxylase family
GAPBOOJH_01225 2.2e-11 K Psort location Cytoplasmic, score
GAPBOOJH_01226 2e-83 K Psort location Cytoplasmic, score
GAPBOOJH_01227 1.5e-163 2.3.1.128 K Acetyltransferase (GNAT) domain
GAPBOOJH_01228 1.7e-84 K Acetyltransferase (GNAT) domain
GAPBOOJH_01229 1.1e-192 L Transposase and inactivated derivatives, IS30 family
GAPBOOJH_01230 1.4e-153 S Uncharacterised protein, DegV family COG1307
GAPBOOJH_01231 3.7e-106
GAPBOOJH_01232 4e-102 desR K helix_turn_helix, Lux Regulon
GAPBOOJH_01233 1.8e-198 desK 2.7.13.3 T Histidine kinase
GAPBOOJH_01234 1.6e-129 yvfS V ABC-2 type transporter
GAPBOOJH_01235 4.4e-158 yvfR V ABC transporter
GAPBOOJH_01236 2.5e-275
GAPBOOJH_01237 9.9e-150
GAPBOOJH_01238 2.2e-82 K Acetyltransferase (GNAT) domain
GAPBOOJH_01239 0.0 yhgF K Tex-like protein N-terminal domain protein
GAPBOOJH_01240 3.8e-139 puuD S peptidase C26
GAPBOOJH_01241 5e-227 steT E Amino acid permease
GAPBOOJH_01242 1.1e-133 dcm 2.1.1.37 H C-5 cytosine-specific DNA methylase
GAPBOOJH_01243 1.9e-145 S Domain of unknown function (DUF1998)
GAPBOOJH_01244 2e-275 KL Helicase conserved C-terminal domain
GAPBOOJH_01246 2.1e-111 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GAPBOOJH_01247 1.5e-83 ytsP 1.8.4.14 T GAF domain-containing protein
GAPBOOJH_01248 1.2e-273 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
GAPBOOJH_01249 2.1e-216 iscS2 2.8.1.7 E Aminotransferase class V
GAPBOOJH_01250 1e-226 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GAPBOOJH_01251 1.5e-115 rex K CoA binding domain
GAPBOOJH_01252 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
GAPBOOJH_01253 9.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
GAPBOOJH_01254 1.3e-114 S Haloacid dehalogenase-like hydrolase
GAPBOOJH_01255 2.7e-118 radC L DNA repair protein
GAPBOOJH_01256 7.8e-180 mreB D cell shape determining protein MreB
GAPBOOJH_01257 8.5e-151 mreC M Involved in formation and maintenance of cell shape
GAPBOOJH_01258 4.7e-83 mreD M rod shape-determining protein MreD
GAPBOOJH_01259 1.4e-113 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
GAPBOOJH_01260 1.1e-141 minD D Belongs to the ParA family
GAPBOOJH_01261 4.7e-109 artQ P ABC transporter permease
GAPBOOJH_01262 1.7e-111 glnQ 3.6.3.21 E ABC transporter
GAPBOOJH_01263 4.3e-152 aatB ET ABC transporter substrate-binding protein
GAPBOOJH_01265 3.1e-270 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GAPBOOJH_01266 8.6e-09 S Protein of unknown function (DUF4044)
GAPBOOJH_01267 4.2e-53
GAPBOOJH_01268 4.8e-78 mraZ K Belongs to the MraZ family
GAPBOOJH_01269 5.3e-170 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
GAPBOOJH_01270 6.2e-58 ftsL D cell division protein FtsL
GAPBOOJH_01271 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
GAPBOOJH_01272 9.2e-178 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GAPBOOJH_01273 1.3e-262 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GAPBOOJH_01274 9.7e-200 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GAPBOOJH_01275 1.3e-151 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
GAPBOOJH_01276 6.9e-224 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
GAPBOOJH_01277 5.4e-218 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GAPBOOJH_01278 6.7e-78 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
GAPBOOJH_01279 5.2e-44 yggT D integral membrane protein
GAPBOOJH_01280 6.4e-145 ylmH S S4 domain protein
GAPBOOJH_01281 1.1e-80 divIVA D DivIVA protein
GAPBOOJH_01282 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GAPBOOJH_01283 8.2e-37 cspA K Cold shock protein
GAPBOOJH_01284 1.5e-145 pstS P Phosphate
GAPBOOJH_01285 5.2e-262 ydiC1 EGP Major facilitator Superfamily
GAPBOOJH_01286 1.8e-207 yaaN P Toxic anion resistance protein (TelA)
GAPBOOJH_01287 7.6e-115 xpaC S 5-bromo-4-chloroindolyl phosphate hydrolysis protein
GAPBOOJH_01288 7e-98 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
GAPBOOJH_01289 5.8e-34
GAPBOOJH_01290 2.4e-122 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GAPBOOJH_01291 3.4e-219 iscS 2.8.1.7 E Aminotransferase class V
GAPBOOJH_01292 2.6e-58 XK27_04120 S Putative amino acid metabolism
GAPBOOJH_01293 0.0 uvrA2 L ABC transporter
GAPBOOJH_01294 3.3e-219 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
GAPBOOJH_01295 1.3e-122 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
GAPBOOJH_01296 7e-116 S Repeat protein
GAPBOOJH_01297 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
GAPBOOJH_01298 2.1e-243 els S Sterol carrier protein domain
GAPBOOJH_01299 6.5e-184 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
GAPBOOJH_01300 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GAPBOOJH_01301 4.9e-31 ykzG S Belongs to the UPF0356 family
GAPBOOJH_01303 1.7e-73
GAPBOOJH_01304 1.9e-25
GAPBOOJH_01305 1.2e-100 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GAPBOOJH_01306 4.3e-136 S E1-E2 ATPase
GAPBOOJH_01307 1.6e-210 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
GAPBOOJH_01308 3.1e-181 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
GAPBOOJH_01309 3.7e-243 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
GAPBOOJH_01310 2.4e-259 lpdA 1.8.1.4 C Dehydrogenase
GAPBOOJH_01311 8.3e-157 1.1.1.27 C L-malate dehydrogenase activity
GAPBOOJH_01312 1.4e-46 yktA S Belongs to the UPF0223 family
GAPBOOJH_01313 5e-145 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
GAPBOOJH_01314 0.0 typA T GTP-binding protein TypA
GAPBOOJH_01315 8.5e-210 ftsW D Belongs to the SEDS family
GAPBOOJH_01316 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
GAPBOOJH_01317 3.8e-57 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
GAPBOOJH_01318 1.7e-99 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
GAPBOOJH_01319 2.8e-85 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GAPBOOJH_01320 3e-193 ylbL T Belongs to the peptidase S16 family
GAPBOOJH_01321 2.6e-107 comEA L Competence protein ComEA
GAPBOOJH_01322 0.0 comEC S Competence protein ComEC
GAPBOOJH_01323 7.7e-194 holA 2.7.7.7 L DNA polymerase III delta subunit
GAPBOOJH_01324 2.3e-35 rpsT J Binds directly to 16S ribosomal RNA
GAPBOOJH_01325 5.4e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GAPBOOJH_01326 2.2e-117
GAPBOOJH_01327 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GAPBOOJH_01328 1.6e-160 S Tetratricopeptide repeat
GAPBOOJH_01329 1.2e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GAPBOOJH_01330 2.2e-82 M Protein of unknown function (DUF3737)
GAPBOOJH_01331 1.4e-133 cobB K Sir2 family
GAPBOOJH_01332 1.7e-63 pcaC 4.1.1.44 S Carboxymuconolactone decarboxylase family
GAPBOOJH_01333 9.3e-65 rmeD K helix_turn_helix, mercury resistance
GAPBOOJH_01334 0.0 yknV V ABC transporter
GAPBOOJH_01335 3.2e-197 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
GAPBOOJH_01336 2.9e-232 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GAPBOOJH_01337 3.1e-107 engB D Necessary for normal cell division and for the maintenance of normal septation
GAPBOOJH_01338 1e-47 MA20_27270 S mazG nucleotide pyrophosphohydrolase
GAPBOOJH_01339 2.3e-20
GAPBOOJH_01340 1.5e-259 glnPH2 P ABC transporter permease
GAPBOOJH_01341 2.4e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GAPBOOJH_01342 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
GAPBOOJH_01343 0.0 fruA 2.7.1.194, 2.7.1.200, 2.7.1.202 GT Phosphotransferase System
GAPBOOJH_01344 2.7e-155 pfkB 2.7.1.11, 2.7.1.144, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
GAPBOOJH_01345 7.7e-132 fruR K DeoR C terminal sensor domain
GAPBOOJH_01346 1.9e-234 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GAPBOOJH_01347 0.0 oatA I Acyltransferase
GAPBOOJH_01348 9.4e-183 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
GAPBOOJH_01349 4.3e-141 XK27_05435 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
GAPBOOJH_01350 1.3e-46 yrvD S Lipopolysaccharide assembly protein A domain
GAPBOOJH_01351 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GAPBOOJH_01352 3.5e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
GAPBOOJH_01353 2.2e-54 M1-874 K Domain of unknown function (DUF1836)
GAPBOOJH_01354 1.7e-298 cpdB 3.1.3.6, 3.1.4.16 F 5'-nucleotidase, C-terminal domain
GAPBOOJH_01355 1.2e-144
GAPBOOJH_01356 6e-20 S Protein of unknown function (DUF2929)
GAPBOOJH_01357 0.0 dnaE 2.7.7.7 L DNA polymerase
GAPBOOJH_01358 3.5e-177 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
GAPBOOJH_01359 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
GAPBOOJH_01360 7.2e-72 yeaL S Protein of unknown function (DUF441)
GAPBOOJH_01361 3.4e-163 cvfB S S1 domain
GAPBOOJH_01362 3.3e-166 xerD D recombinase XerD
GAPBOOJH_01363 3.4e-67 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
GAPBOOJH_01364 7.3e-127 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
GAPBOOJH_01365 3.3e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GAPBOOJH_01366 9.4e-138 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GAPBOOJH_01367 4.5e-95 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GAPBOOJH_01368 1.4e-45 fer C 4Fe-4S single cluster domain of Ferredoxin I
GAPBOOJH_01369 1e-179 ypbB 5.1.3.1 S Helix-turn-helix domain
GAPBOOJH_01370 1.3e-265 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
GAPBOOJH_01371 3.8e-55 M Lysin motif
GAPBOOJH_01372 2.6e-115 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
GAPBOOJH_01373 1.1e-218 rpsA 1.17.7.4 J Ribosomal protein S1
GAPBOOJH_01374 5.3e-245 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
GAPBOOJH_01375 2e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
GAPBOOJH_01376 2.6e-266 L Transposase DDE domain
GAPBOOJH_01377 3.5e-233 S Tetratricopeptide repeat protein
GAPBOOJH_01378 4.8e-149 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GAPBOOJH_01379 2.8e-224 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
GAPBOOJH_01380 9.6e-85
GAPBOOJH_01381 0.0 yfmR S ABC transporter, ATP-binding protein
GAPBOOJH_01382 4.2e-191 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GAPBOOJH_01383 7.4e-91 folA 1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
GAPBOOJH_01384 2.1e-114 hly S protein, hemolysin III
GAPBOOJH_01385 1.5e-147 DegV S EDD domain protein, DegV family
GAPBOOJH_01386 7.8e-157 ypmR E GDSL-like Lipase/Acylhydrolase
GAPBOOJH_01387 5.8e-112 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
GAPBOOJH_01388 2.9e-78 msrA 1.8.4.11, 1.8.4.12 C Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GAPBOOJH_01389 2.3e-40 yozE S Belongs to the UPF0346 family
GAPBOOJH_01390 3e-257 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
GAPBOOJH_01391 3.4e-15
GAPBOOJH_01392 1.1e-192 L Transposase and inactivated derivatives, IS30 family
GAPBOOJH_01393 3.1e-66 S Psort location Cytoplasmic, score
GAPBOOJH_01394 6e-12
GAPBOOJH_01395 4.8e-131 S Domain of unknown function (DUF4918)
GAPBOOJH_01396 1.8e-156 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
GAPBOOJH_01397 3.6e-137 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GAPBOOJH_01398 1.4e-147 dprA LU DNA protecting protein DprA
GAPBOOJH_01399 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GAPBOOJH_01400 3e-248 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
GAPBOOJH_01401 1.5e-166 xerC D Belongs to the 'phage' integrase family. XerC subfamily
GAPBOOJH_01402 5.5e-92 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
GAPBOOJH_01403 5e-257 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
GAPBOOJH_01404 6.2e-173 lacX 5.1.3.3 G Aldose 1-epimerase
GAPBOOJH_01405 4.5e-109 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
GAPBOOJH_01406 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GAPBOOJH_01407 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GAPBOOJH_01408 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
GAPBOOJH_01409 4.3e-171 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GAPBOOJH_01410 1.8e-181 K LysR substrate binding domain
GAPBOOJH_01411 9.5e-172 ppaC 3.6.1.1 C inorganic pyrophosphatase
GAPBOOJH_01412 2.9e-207 xerS L Belongs to the 'phage' integrase family
GAPBOOJH_01413 0.0 ysaB V FtsX-like permease family
GAPBOOJH_01414 3.8e-134 XK27_05695 V ABC transporter, ATP-binding protein
GAPBOOJH_01415 5.2e-173 T Histidine kinase-like ATPases
GAPBOOJH_01416 4.8e-128 T Transcriptional regulatory protein, C terminal
GAPBOOJH_01417 1.1e-217 EGP Transmembrane secretion effector
GAPBOOJH_01418 7.1e-68 msi198 K Acetyltransferase (GNAT) domain
GAPBOOJH_01419 5.9e-70 K Acetyltransferase (GNAT) domain
GAPBOOJH_01420 2.6e-112 nfnB 1.5.1.34 C Nitroreductase family
GAPBOOJH_01421 1.3e-145 Q Fumarylacetoacetate (FAA) hydrolase family
GAPBOOJH_01422 3.1e-206 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
GAPBOOJH_01423 6e-52 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
GAPBOOJH_01424 2.1e-57 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
GAPBOOJH_01425 3.2e-133 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
GAPBOOJH_01426 4.1e-133 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
GAPBOOJH_01427 1.5e-112 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
GAPBOOJH_01428 2.4e-104 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
GAPBOOJH_01429 3.5e-225 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
GAPBOOJH_01430 2.7e-109 hisG 2.4.2.17 F Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
GAPBOOJH_01431 9.2e-217 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
GAPBOOJH_01432 2.2e-204 hisC 2.6.1.9 E Cys/Met metabolism PLP-dependent enzyme
GAPBOOJH_01433 1.5e-100 3.6.1.13 L Belongs to the Nudix hydrolase family
GAPBOOJH_01434 3.2e-161 degV S EDD domain protein, DegV family
GAPBOOJH_01435 8.1e-09
GAPBOOJH_01436 0.0 FbpA K Fibronectin-binding protein
GAPBOOJH_01437 6.2e-51 S MazG-like family
GAPBOOJH_01438 3.2e-193 pfoS S Phosphotransferase system, EIIC
GAPBOOJH_01439 2.9e-111 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GAPBOOJH_01440 8e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
GAPBOOJH_01441 2.1e-152 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
GAPBOOJH_01442 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
GAPBOOJH_01443 1e-209 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
GAPBOOJH_01444 2.5e-239 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
GAPBOOJH_01445 2.8e-179 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
GAPBOOJH_01446 2.6e-236 pyrP F Permease
GAPBOOJH_01447 1.7e-96 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GAPBOOJH_01448 5e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GAPBOOJH_01449 9.2e-82 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GAPBOOJH_01450 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
GAPBOOJH_01451 2.4e-63 S Family of unknown function (DUF5322)
GAPBOOJH_01452 1.1e-68 rnhA 3.1.26.4 L Ribonuclease HI
GAPBOOJH_01453 1.5e-109 XK27_02070 S Nitroreductase family
GAPBOOJH_01454 1.8e-281 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GAPBOOJH_01455 9.7e-55
GAPBOOJH_01457 1.6e-271 K Mga helix-turn-helix domain
GAPBOOJH_01458 4.5e-38 nrdH O Glutaredoxin
GAPBOOJH_01459 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GAPBOOJH_01460 1.2e-188 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GAPBOOJH_01462 4.1e-164 K Transcriptional regulator
GAPBOOJH_01463 0.0 pepO 3.4.24.71 O Peptidase family M13
GAPBOOJH_01464 1.6e-193 lplA 6.3.1.20 H Lipoate-protein ligase
GAPBOOJH_01465 1.9e-33
GAPBOOJH_01466 7.8e-174 pdxB 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
GAPBOOJH_01467 3.7e-218 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
GAPBOOJH_01469 1.8e-66 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
GAPBOOJH_01470 1.9e-106 ypsA S Belongs to the UPF0398 family
GAPBOOJH_01471 1.5e-120 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
GAPBOOJH_01472 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
GAPBOOJH_01473 1.2e-85 comEB 3.5.4.12 F ComE operon protein 2
GAPBOOJH_01474 2.4e-113 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GAPBOOJH_01475 2.4e-110 dnaD L DnaD domain protein
GAPBOOJH_01476 1.2e-257 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
GAPBOOJH_01477 2.4e-220 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
GAPBOOJH_01478 2.1e-85 ypmB S Protein conserved in bacteria
GAPBOOJH_01479 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
GAPBOOJH_01480 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
GAPBOOJH_01481 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
GAPBOOJH_01482 4.6e-166 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
GAPBOOJH_01483 2.1e-177 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
GAPBOOJH_01484 3.6e-196 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
GAPBOOJH_01485 1.3e-262 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
GAPBOOJH_01486 4.7e-174
GAPBOOJH_01487 2e-140
GAPBOOJH_01488 2.8e-60 yitW S Iron-sulfur cluster assembly protein
GAPBOOJH_01489 7.3e-26 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
GAPBOOJH_01490 1e-271 V (ABC) transporter
GAPBOOJH_01491 2.8e-310 V ABC transporter transmembrane region
GAPBOOJH_01492 1.8e-147 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
GAPBOOJH_01493 1.7e-128 trmK 2.1.1.217 S SAM-dependent methyltransferase
GAPBOOJH_01494 1.3e-195 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
GAPBOOJH_01495 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
GAPBOOJH_01496 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
GAPBOOJH_01497 1.8e-175 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
GAPBOOJH_01498 2e-94 2.3.1.128, 5.2.1.8 J Acetyltransferase (GNAT) domain
GAPBOOJH_01500 1.8e-49 V ATPases associated with a variety of cellular activities
GAPBOOJH_01501 1.1e-192 L Transposase and inactivated derivatives, IS30 family
GAPBOOJH_01502 8.2e-65 V ATPases associated with a variety of cellular activities
GAPBOOJH_01503 3.9e-53
GAPBOOJH_01504 4.9e-148 recO L Involved in DNA repair and RecF pathway recombination
GAPBOOJH_01505 1.1e-167 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GAPBOOJH_01506 1.8e-63 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
GAPBOOJH_01507 1.5e-65 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
GAPBOOJH_01508 6.9e-83 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GAPBOOJH_01509 2.9e-179 phoH T phosphate starvation-inducible protein PhoH
GAPBOOJH_01510 1.6e-68 yqeY S YqeY-like protein
GAPBOOJH_01511 2.9e-21 rpsU J Belongs to the bacterial ribosomal protein bS21 family
GAPBOOJH_01512 7.2e-155 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
GAPBOOJH_01513 4.7e-168 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
GAPBOOJH_01514 4.4e-169 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GAPBOOJH_01515 1.1e-80 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
GAPBOOJH_01516 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
GAPBOOJH_01517 1.4e-242 hisS 6.1.1.21 J histidyl-tRNA synthetase
GAPBOOJH_01518 1.3e-266
GAPBOOJH_01519 5.6e-158 V ABC transporter
GAPBOOJH_01520 1e-78 FG adenosine 5'-monophosphoramidase activity
GAPBOOJH_01521 5.2e-248 lytH 3.5.1.28, 6.1.1.12 M N-acetylmuramoyl-L-alanine amidase
GAPBOOJH_01522 7.2e-115 3.1.3.18 J HAD-hyrolase-like
GAPBOOJH_01523 5.2e-75 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GAPBOOJH_01524 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GAPBOOJH_01525 4e-53
GAPBOOJH_01526 3.9e-128 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
GAPBOOJH_01527 3e-173 prmA J Ribosomal protein L11 methyltransferase
GAPBOOJH_01528 2e-83 XK27_03960 S Protein of unknown function (DUF3013)
GAPBOOJH_01529 3.2e-112 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
GAPBOOJH_01530 3.1e-37
GAPBOOJH_01531 3.1e-60 S Protein of unknown function (DUF1093)
GAPBOOJH_01532 2.3e-26
GAPBOOJH_01533 6.3e-61
GAPBOOJH_01535 9.2e-112 1.6.5.2 S Flavodoxin-like fold
GAPBOOJH_01536 3.8e-91 K Bacterial regulatory proteins, tetR family
GAPBOOJH_01537 1.9e-186 mocA S Oxidoreductase
GAPBOOJH_01538 7.7e-278 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
GAPBOOJH_01539 9.9e-299 2.4.1.52 GT4 M Glycosyl transferases group 1
GAPBOOJH_01541 1.3e-302 2.4.1.9, 3.4.24.40 GH68 S peptidase inhibitor activity
GAPBOOJH_01543 6.7e-287
GAPBOOJH_01544 1.9e-124
GAPBOOJH_01545 3.3e-186
GAPBOOJH_01546 5.3e-147 hutG 3.5.3.8 E N-formylglutamate amidohydrolase
GAPBOOJH_01547 1.2e-54 XK27_08430 S Staphylococcal protein of unknown function (DUF960)
GAPBOOJH_01548 3.7e-90 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GAPBOOJH_01549 2e-94 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GAPBOOJH_01550 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
GAPBOOJH_01551 7.1e-62
GAPBOOJH_01552 9.4e-83 6.3.3.2 S ASCH
GAPBOOJH_01553 5.9e-32
GAPBOOJH_01554 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
GAPBOOJH_01555 4.1e-188 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
GAPBOOJH_01556 1e-286 dnaK O Heat shock 70 kDa protein
GAPBOOJH_01557 5.2e-99 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GAPBOOJH_01558 8.4e-193 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
GAPBOOJH_01559 1.6e-224 hemN H Involved in the biosynthesis of porphyrin-containing compound
GAPBOOJH_01560 7.2e-175 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
GAPBOOJH_01561 1.3e-160 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GAPBOOJH_01562 6.7e-119 terC P membrane
GAPBOOJH_01563 4.6e-58 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GAPBOOJH_01564 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GAPBOOJH_01565 5.4e-44 ylxQ J ribosomal protein
GAPBOOJH_01566 1.5e-46 ylxR K Protein of unknown function (DUF448)
GAPBOOJH_01567 1e-202 nusA K Participates in both transcription termination and antitermination
GAPBOOJH_01568 1e-84 rimP J Required for maturation of 30S ribosomal subunits
GAPBOOJH_01569 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GAPBOOJH_01570 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
GAPBOOJH_01571 4.1e-231 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
GAPBOOJH_01572 7.3e-141 cdsA 2.7.7.41 S Belongs to the CDS family
GAPBOOJH_01573 9.5e-138 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GAPBOOJH_01574 4e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
GAPBOOJH_01575 8.5e-128 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
GAPBOOJH_01576 2e-155 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GAPBOOJH_01577 1.8e-131 rpsB J Belongs to the universal ribosomal protein uS2 family
GAPBOOJH_01578 1.3e-47 yazA L GIY-YIG catalytic domain protein
GAPBOOJH_01579 4.8e-134 yabB 2.1.1.223 L Methyltransferase small domain
GAPBOOJH_01580 2.2e-122 plsC 2.3.1.51 I Acyltransferase
GAPBOOJH_01581 5e-201 bcaP E Amino Acid
GAPBOOJH_01582 2.6e-138 yejC S Protein of unknown function (DUF1003)
GAPBOOJH_01583 0.0 mdlB V ABC transporter
GAPBOOJH_01584 0.0 mdlA V ABC transporter
GAPBOOJH_01585 4.8e-29 yneF S UPF0154 protein
GAPBOOJH_01586 1.1e-37 ynzC S UPF0291 protein
GAPBOOJH_01587 1.1e-25
GAPBOOJH_01588 6.5e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
GAPBOOJH_01589 3.1e-147 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
GAPBOOJH_01590 7.6e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GAPBOOJH_01591 8.4e-38 ylqC S Belongs to the UPF0109 family
GAPBOOJH_01592 1e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
GAPBOOJH_01593 1.2e-229 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GAPBOOJH_01594 1.3e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
GAPBOOJH_01595 6.8e-24
GAPBOOJH_01596 8.8e-53
GAPBOOJH_01597 1.3e-182 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
GAPBOOJH_01598 0.0 smc D Required for chromosome condensation and partitioning
GAPBOOJH_01599 1.9e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
GAPBOOJH_01600 0.0 oppA1 E ABC transporter substrate-binding protein
GAPBOOJH_01601 8.2e-136 oppC EP Binding-protein-dependent transport system inner membrane component
GAPBOOJH_01602 2.8e-174 oppB P ABC transporter permease
GAPBOOJH_01603 5.3e-178 oppF P Belongs to the ABC transporter superfamily
GAPBOOJH_01604 4.4e-194 oppD P Belongs to the ABC transporter superfamily
GAPBOOJH_01605 8.9e-37 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
GAPBOOJH_01606 1.5e-186 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
GAPBOOJH_01607 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
GAPBOOJH_01608 4.7e-286 yloV S DAK2 domain fusion protein YloV
GAPBOOJH_01609 2.3e-57 asp S Asp23 family, cell envelope-related function
GAPBOOJH_01610 2.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
GAPBOOJH_01611 1.3e-122 thiN 2.7.6.2 H thiamine pyrophosphokinase
GAPBOOJH_01612 9.7e-115 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
GAPBOOJH_01613 1.9e-169 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
GAPBOOJH_01614 0.0 KLT serine threonine protein kinase
GAPBOOJH_01615 2e-135 stp 3.1.3.16 T phosphatase
GAPBOOJH_01616 1e-251 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
GAPBOOJH_01617 1.6e-174 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GAPBOOJH_01618 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GAPBOOJH_01619 5.2e-215 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GAPBOOJH_01620 2.9e-35 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
GAPBOOJH_01621 3.2e-115 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
GAPBOOJH_01622 4.7e-120 rssA S Patatin-like phospholipase
GAPBOOJH_01623 6e-51
GAPBOOJH_01624 5.7e-308 recN L May be involved in recombinational repair of damaged DNA
GAPBOOJH_01625 2e-74 argR K Regulates arginine biosynthesis genes
GAPBOOJH_01626 5.2e-153 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
GAPBOOJH_01627 1.8e-145 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GAPBOOJH_01628 1.6e-32 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GAPBOOJH_01629 2.1e-244 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GAPBOOJH_01630 5e-151 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GAPBOOJH_01631 2e-66 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GAPBOOJH_01632 1.5e-72 yqhY S Asp23 family, cell envelope-related function
GAPBOOJH_01633 6.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GAPBOOJH_01634 7e-203 ypdF 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
GAPBOOJH_01635 1.7e-47 rpmA J Belongs to the bacterial ribosomal protein bL27 family
GAPBOOJH_01636 1.2e-55 ysxB J Cysteine protease Prp
GAPBOOJH_01637 4.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
GAPBOOJH_01638 3.8e-32
GAPBOOJH_01639 4.1e-14
GAPBOOJH_01640 2.5e-233 ywhK S Membrane
GAPBOOJH_01642 1.1e-263 V ABC transporter transmembrane region
GAPBOOJH_01643 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
GAPBOOJH_01644 5.8e-263 glnA 6.3.1.2 E glutamine synthetase
GAPBOOJH_01645 1e-60 glnR K Transcriptional regulator
GAPBOOJH_01646 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
GAPBOOJH_01647 6.5e-240 ynbB 4.4.1.1 P aluminum resistance
GAPBOOJH_01648 5.7e-180 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GAPBOOJH_01649 9.8e-25 WQ51_02665 S Protein of unknown function (DUF3042)
GAPBOOJH_01650 3.7e-72 yqhL P Rhodanese-like protein
GAPBOOJH_01651 2e-177 glk 2.7.1.2 G Glucokinase
GAPBOOJH_01652 1.1e-40 yqgQ S Bacterial protein of unknown function (DUF910)
GAPBOOJH_01653 9.6e-121 gluP 3.4.21.105 S Peptidase, S54 family
GAPBOOJH_01654 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
GAPBOOJH_01655 0.0 S Bacterial membrane protein YfhO
GAPBOOJH_01656 2.9e-53 yneR S Belongs to the HesB IscA family
GAPBOOJH_01657 5.8e-115 vraR K helix_turn_helix, Lux Regulon
GAPBOOJH_01658 2.3e-182 vraS 2.7.13.3 T Histidine kinase
GAPBOOJH_01659 8.9e-122 yvqF S Cell wall-active antibiotics response 4TMS YvqF
GAPBOOJH_01660 9e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GAPBOOJH_01661 6.9e-113 udk 2.7.1.48 F Cytidine monophosphokinase
GAPBOOJH_01662 1.5e-206 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GAPBOOJH_01663 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GAPBOOJH_01664 1.3e-201 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GAPBOOJH_01665 2.6e-67 yodB K Transcriptional regulator, HxlR family
GAPBOOJH_01666 5.6e-94 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
GAPBOOJH_01667 1.1e-136 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GAPBOOJH_01668 6e-45 acyP 3.6.1.7 C Belongs to the acylphosphatase family
GAPBOOJH_01669 4.5e-180 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GAPBOOJH_01670 5.2e-287 arlS 2.7.13.3 T Histidine kinase
GAPBOOJH_01671 7.9e-123 K response regulator
GAPBOOJH_01672 7.2e-272 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GAPBOOJH_01673 1.6e-94 yceD S Uncharacterized ACR, COG1399
GAPBOOJH_01674 5.5e-206 ylbM S Belongs to the UPF0348 family
GAPBOOJH_01675 1.7e-139 yqeM Q Methyltransferase
GAPBOOJH_01676 1.9e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
GAPBOOJH_01677 2.5e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
GAPBOOJH_01678 9.4e-118 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GAPBOOJH_01679 1.2e-46 yhbY J RNA-binding protein
GAPBOOJH_01680 3.4e-216 yqeH S Ribosome biogenesis GTPase YqeH
GAPBOOJH_01681 2.4e-95 yqeG S HAD phosphatase, family IIIA
GAPBOOJH_01682 2e-166 ykcA E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GAPBOOJH_01683 1.2e-190 mhqA 3.4.21.26 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GAPBOOJH_01684 1.8e-121 mhqD S Dienelactone hydrolase family
GAPBOOJH_01685 3.7e-179 3.5.1.10 C Alcohol dehydrogenase GroES-like domain
GAPBOOJH_01686 1e-99 yvdD 3.2.2.10 S Belongs to the LOG family
GAPBOOJH_01687 1.1e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GAPBOOJH_01688 9e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
GAPBOOJH_01689 8.9e-78 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GAPBOOJH_01690 8.8e-236 spoVK O ATPase family associated with various cellular activities (AAA)
GAPBOOJH_01691 3.5e-12
GAPBOOJH_01692 4.2e-37 yfjR K WYL domain
GAPBOOJH_01693 6.5e-125 S SseB protein N-terminal domain
GAPBOOJH_01694 5.5e-65
GAPBOOJH_01695 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GAPBOOJH_01696 1.2e-169 dnaI L Primosomal protein DnaI
GAPBOOJH_01697 2.1e-249 dnaB L replication initiation and membrane attachment
GAPBOOJH_01698 3.3e-80 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GAPBOOJH_01699 2.3e-102 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GAPBOOJH_01700 1.5e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
GAPBOOJH_01701 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GAPBOOJH_01702 1.3e-117 ybhL S Inhibitor of apoptosis-promoting Bax1
GAPBOOJH_01703 1.1e-187 S Cell surface protein
GAPBOOJH_01705 2.1e-135 S WxL domain surface cell wall-binding
GAPBOOJH_01706 0.0 N domain, Protein
GAPBOOJH_01707 5.3e-265 K Mga helix-turn-helix domain
GAPBOOJH_01708 4.1e-253 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
GAPBOOJH_01709 2.8e-28 sftA D Belongs to the FtsK SpoIIIE SftA family
GAPBOOJH_01710 0.0 sftA D Belongs to the FtsK SpoIIIE SftA family
GAPBOOJH_01712 1.2e-112 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GAPBOOJH_01713 7.2e-55 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
GAPBOOJH_01715 4.5e-120 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
GAPBOOJH_01716 1.2e-148 ytmP 2.7.1.89 M Choline/ethanolamine kinase
GAPBOOJH_01718 9e-223 ecsB U ABC transporter
GAPBOOJH_01719 4.9e-131 ecsA V ABC transporter, ATP-binding protein
GAPBOOJH_01720 5.5e-74 hit FG histidine triad
GAPBOOJH_01721 7.4e-48 yhaH S YtxH-like protein
GAPBOOJH_01722 2.6e-158 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
GAPBOOJH_01723 2.1e-182 yhaM S Metal dependent phosphohydrolases with conserved 'HD' motif.
GAPBOOJH_01724 4.6e-55 yheA S Control of competence regulator ComK, YlbF/YmcA
GAPBOOJH_01725 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
GAPBOOJH_01726 3.6e-154 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GAPBOOJH_01727 2e-74 argR K Regulates arginine biosynthesis genes
GAPBOOJH_01728 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
GAPBOOJH_01730 5.9e-67
GAPBOOJH_01731 6.1e-22
GAPBOOJH_01732 1.2e-177 pyrD 1.3.1.14, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate
GAPBOOJH_01733 4.5e-303 glpQ 3.1.4.46 C phosphodiesterase
GAPBOOJH_01734 5.1e-122 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
GAPBOOJH_01735 1.5e-65 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
GAPBOOJH_01736 4.6e-137 yhfI S Metallo-beta-lactamase superfamily
GAPBOOJH_01737 7.6e-91 traP 1.14.99.57, 6.2.1.3 S Antibiotic biosynthesis monooxygenase
GAPBOOJH_01738 0.0 V ABC transporter (permease)
GAPBOOJH_01739 2.6e-138 bceA V ABC transporter
GAPBOOJH_01740 1e-122 K response regulator
GAPBOOJH_01741 1.3e-207 T PhoQ Sensor
GAPBOOJH_01742 3.2e-109 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GAPBOOJH_01743 0.0 copB 3.6.3.4 P P-type ATPase
GAPBOOJH_01744 1.6e-76 copR K Copper transport repressor CopY TcrY
GAPBOOJH_01745 3.6e-219 purD 6.3.4.13 F Belongs to the GARS family
GAPBOOJH_01746 3.5e-288 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
GAPBOOJH_01747 7.8e-100 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
GAPBOOJH_01748 2.1e-185 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
GAPBOOJH_01749 4e-278 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
GAPBOOJH_01750 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GAPBOOJH_01751 3e-130 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GAPBOOJH_01752 6.4e-41 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GAPBOOJH_01753 2.3e-133 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
GAPBOOJH_01754 5.1e-212 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GAPBOOJH_01755 2.2e-79 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
GAPBOOJH_01756 1.6e-103 thiT S Thiamine transporter protein (Thia_YuaJ)
GAPBOOJH_01758 1.2e-253 iolT EGP Major facilitator Superfamily
GAPBOOJH_01759 7.4e-12
GAPBOOJH_01760 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GAPBOOJH_01761 2.7e-39 ptsH G phosphocarrier protein HPR
GAPBOOJH_01762 2e-28
GAPBOOJH_01763 0.0 clpE O Belongs to the ClpA ClpB family
GAPBOOJH_01764 4.3e-46 XK27_09445 S Domain of unknown function (DUF1827)
GAPBOOJH_01765 7.9e-304 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
GAPBOOJH_01766 5.1e-243 hlyX S Transporter associated domain
GAPBOOJH_01767 6.8e-207 yueF S AI-2E family transporter
GAPBOOJH_01768 8.6e-75 S Acetyltransferase (GNAT) domain
GAPBOOJH_01769 2.8e-96
GAPBOOJH_01770 4e-104 ygaC J Belongs to the UPF0374 family
GAPBOOJH_01771 6.5e-137 recX 2.4.1.337 GT4 S Regulatory protein RecX
GAPBOOJH_01772 2.6e-291 frvR K Mga helix-turn-helix domain
GAPBOOJH_01773 6e-64
GAPBOOJH_01774 4e-251 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GAPBOOJH_01775 3.7e-79 F Nucleoside 2-deoxyribosyltransferase
GAPBOOJH_01776 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
GAPBOOJH_01778 1.5e-219 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
GAPBOOJH_01779 6.9e-210 mvaA 1.1.1.34, 1.1.1.88 C Belongs to the HMG-CoA reductase family
GAPBOOJH_01780 2.2e-210 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
GAPBOOJH_01781 2e-46
GAPBOOJH_01782 6.3e-159 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
GAPBOOJH_01783 1.8e-101 V Restriction endonuclease
GAPBOOJH_01784 1.8e-158 5.1.3.3 G Aldose 1-epimerase
GAPBOOJH_01785 4.4e-211 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
GAPBOOJH_01786 4.4e-101 S ECF transporter, substrate-specific component
GAPBOOJH_01788 6.6e-81 yodP 2.3.1.264 K FR47-like protein
GAPBOOJH_01789 1.3e-81 ydcK S Belongs to the SprT family
GAPBOOJH_01790 2.8e-129 XK27_08845 S ABC transporter, ATP-binding protein
GAPBOOJH_01791 5.6e-129 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
GAPBOOJH_01792 4e-176 XK27_08835 S ABC transporter
GAPBOOJH_01793 6.2e-73
GAPBOOJH_01794 0.0 pacL 3.6.3.8 P P-type ATPase
GAPBOOJH_01795 2.1e-216 V Beta-lactamase
GAPBOOJH_01796 3.7e-151 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
GAPBOOJH_01797 1.3e-221 V Beta-lactamase
GAPBOOJH_01798 6.1e-274 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GAPBOOJH_01799 6.6e-125 gntR1 K UbiC transcription regulator-associated domain protein
GAPBOOJH_01800 1.7e-218 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
GAPBOOJH_01801 1.3e-137 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GAPBOOJH_01802 0.0 yuxL 3.4.19.1 E Prolyl oligopeptidase family
GAPBOOJH_01803 1e-262 sprD D Domain of Unknown Function (DUF1542)
GAPBOOJH_01804 1.9e-275 mga K Mga helix-turn-helix domain
GAPBOOJH_01806 1.6e-157 yjjH S Calcineurin-like phosphoesterase
GAPBOOJH_01807 1.2e-256 dtpT U amino acid peptide transporter
GAPBOOJH_01808 0.0 macB_3 V ABC transporter, ATP-binding protein
GAPBOOJH_01809 1.4e-65
GAPBOOJH_01810 2.1e-73 S function, without similarity to other proteins
GAPBOOJH_01811 9.9e-261 G MFS/sugar transport protein
GAPBOOJH_01812 1e-231 alfA 3.2.1.51 GH29 G Alpha-L-fucosidase
GAPBOOJH_01813 1e-56
GAPBOOJH_01814 0.0 pckG 4.1.1.32, 4.1.1.49 C Phosphoenolpyruvate carboxykinase
GAPBOOJH_01815 2.7e-24 S Virus attachment protein p12 family
GAPBOOJH_01816 1.2e-247 feoB P transporter of a GTP-driven Fe(2 ) uptake system
GAPBOOJH_01817 4.3e-141 feoB P transporter of a GTP-driven Fe(2 ) uptake system
GAPBOOJH_01818 5.2e-99 feoA P FeoA
GAPBOOJH_01819 5.2e-106 E lipolytic protein G-D-S-L family
GAPBOOJH_01820 3.5e-88 E AAA domain
GAPBOOJH_01823 2.9e-119 ywnB S NAD(P)H-binding
GAPBOOJH_01824 1.1e-91 S MucBP domain
GAPBOOJH_01825 1.3e-85
GAPBOOJH_01827 9.3e-13
GAPBOOJH_01828 6.8e-20 S the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts
GAPBOOJH_01829 2.4e-71 S COG NOG38524 non supervised orthologous group
GAPBOOJH_01832 6.1e-35
GAPBOOJH_01833 7.6e-212 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GAPBOOJH_01834 2.4e-300 frvR K Mga helix-turn-helix domain
GAPBOOJH_01835 2.4e-297 frvR K Mga helix-turn-helix domain
GAPBOOJH_01836 1.6e-266 lysP E amino acid
GAPBOOJH_01838 5.3e-130 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
GAPBOOJH_01839 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
GAPBOOJH_01840 1.6e-97
GAPBOOJH_01841 1.6e-97 2.3.1.128 J Acetyltransferase (GNAT) domain
GAPBOOJH_01842 1.2e-07
GAPBOOJH_01843 9.5e-189 S Bacterial protein of unknown function (DUF916)
GAPBOOJH_01844 8.4e-102
GAPBOOJH_01845 2e-18 rpmG J Belongs to the bacterial ribosomal protein bL33 family
GAPBOOJH_01846 2.3e-159 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
GAPBOOJH_01847 1.7e-156 I alpha/beta hydrolase fold
GAPBOOJH_01848 1.3e-47
GAPBOOJH_01849 6.5e-69
GAPBOOJH_01850 7.9e-46
GAPBOOJH_01851 1e-156 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
GAPBOOJH_01852 7.2e-124 citR K FCD
GAPBOOJH_01853 3.8e-265 oadA 2.1.3.1, 4.1.1.3, 6.4.1.1, 6.4.1.7 C Conserved carboxylase domain
GAPBOOJH_01854 5.2e-101 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
GAPBOOJH_01855 9.8e-283 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
GAPBOOJH_01856 2.6e-155 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
GAPBOOJH_01857 2.2e-48 citD C Covalent carrier of the coenzyme of citrate lyase
GAPBOOJH_01858 4.2e-181 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
GAPBOOJH_01860 1e-196 oadB 4.1.1.3 C Na+-transporting oxaloacetate decarboxylase beta subunit
GAPBOOJH_01861 8.7e-37 gcdC 2.3.1.12 I Biotin-requiring enzyme
GAPBOOJH_01862 3.8e-51
GAPBOOJH_01863 2.2e-241 citM C Citrate transporter
GAPBOOJH_01864 1.3e-41
GAPBOOJH_01865 2.4e-95 kptA J Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
GAPBOOJH_01866 2.5e-86 K Acetyltransferase (GNAT) domain
GAPBOOJH_01867 3.9e-105 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
GAPBOOJH_01868 1.8e-56 K Transcriptional regulator PadR-like family
GAPBOOJH_01869 4.6e-64 ORF00048
GAPBOOJH_01870 5.2e-136 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
GAPBOOJH_01871 6.3e-168 yjjC V ABC transporter
GAPBOOJH_01872 6.1e-283 M Exporter of polyketide antibiotics
GAPBOOJH_01873 8.9e-113 K Transcriptional regulator
GAPBOOJH_01874 6.5e-257 ypiB EGP Major facilitator Superfamily
GAPBOOJH_01875 1.1e-127 S membrane transporter protein
GAPBOOJH_01876 8.3e-185 K Helix-turn-helix domain
GAPBOOJH_01877 1.7e-159 S Alpha beta hydrolase
GAPBOOJH_01878 3.6e-61 yvoA_1 K Transcriptional regulator, GntR family
GAPBOOJH_01879 9.4e-127 skfE V ATPases associated with a variety of cellular activities
GAPBOOJH_01880 6.2e-14
GAPBOOJH_01881 2.6e-266 L Transposase DDE domain
GAPBOOJH_01883 2.6e-266 L Transposase DDE domain
GAPBOOJH_01884 2.4e-155
GAPBOOJH_01885 4.9e-88 V ATPases associated with a variety of cellular activities
GAPBOOJH_01886 1.3e-162 oppF P Oligopeptide/dipeptide transporter, C-terminal region
GAPBOOJH_01887 2.2e-196 oppD P Oligopeptide/dipeptide transporter, C-terminal region
GAPBOOJH_01888 1.7e-48
GAPBOOJH_01889 3e-173 amiD P N-terminal TM domain of oligopeptide transport permease C
GAPBOOJH_01890 1e-168 oppB P Binding-protein-dependent transport system inner membrane component
GAPBOOJH_01891 2.1e-299 E Bacterial extracellular solute-binding proteins, family 5 Middle
GAPBOOJH_01892 2.4e-35
GAPBOOJH_01893 6.4e-288 V ABC transporter transmembrane region
GAPBOOJH_01894 5.6e-281 V ABC transporter transmembrane region
GAPBOOJH_01895 9.3e-68 S Iron-sulphur cluster biosynthesis
GAPBOOJH_01896 9e-137 2.7.1.39 S Phosphotransferase enzyme family
GAPBOOJH_01897 1.5e-114 zmp3 O Zinc-dependent metalloprotease
GAPBOOJH_01898 2.7e-23 WQ51_00220 K Helix-turn-helix XRE-family like proteins
GAPBOOJH_01900 1e-66 lytN 3.5.1.104 M LysM domain
GAPBOOJH_01901 0.0 lytN 3.5.1.104 M LysM domain
GAPBOOJH_01903 8e-49 lciIC K Helix-turn-helix XRE-family like proteins
GAPBOOJH_01904 5.9e-94 L restriction endonuclease
GAPBOOJH_01905 5.8e-37 L Plasmid pRiA4b ORF-3-like protein
GAPBOOJH_01907 1.3e-24 K Cro/C1-type HTH DNA-binding domain
GAPBOOJH_01912 1.6e-13 M LysM domain
GAPBOOJH_01913 4.6e-56
GAPBOOJH_01914 5.6e-79 K Putative DNA-binding domain
GAPBOOJH_01916 1.5e-44 S Abortive infection C-terminus
GAPBOOJH_01917 3.9e-160 L Belongs to the 'phage' integrase family
GAPBOOJH_01918 9.3e-11 S Domain of unknown function (DUF3173)
GAPBOOJH_01919 4.8e-81 K Replication initiation factor
GAPBOOJH_01920 6.5e-58 3.6.4.12 L Viral (Superfamily 1) RNA helicase
GAPBOOJH_01921 6.7e-112 L AAA domain
GAPBOOJH_01922 1.2e-145 pstS P T5orf172
GAPBOOJH_01923 3.3e-291 yeeB L DEAD-like helicases superfamily
GAPBOOJH_01924 0.0 yeeA V Type II restriction enzyme, methylase subunits
GAPBOOJH_01925 2.1e-301 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
GAPBOOJH_01926 2e-177 coaA 2.7.1.33 F Pantothenic acid kinase
GAPBOOJH_01927 4.4e-53
GAPBOOJH_01928 2.4e-41
GAPBOOJH_01929 1.2e-274 pipD E Dipeptidase
GAPBOOJH_01930 1.2e-82 ykhA 3.1.2.20 I Thioesterase superfamily
GAPBOOJH_01931 0.0 helD 3.6.4.12 L DNA helicase
GAPBOOJH_01932 2.3e-27
GAPBOOJH_01933 0.0 yjbQ P TrkA C-terminal domain protein
GAPBOOJH_01934 3.2e-180 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
GAPBOOJH_01935 2.9e-81 yjhE S Phage tail protein
GAPBOOJH_01936 4.1e-216 mntH P H( )-stimulated, divalent metal cation uptake system
GAPBOOJH_01937 5.6e-183 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
GAPBOOJH_01938 1.2e-128 pgm3 G Phosphoglycerate mutase family
GAPBOOJH_01939 3.8e-170 rhaD 4.1.2.17, 4.1.2.19, 5.1.3.4 H Catalyzes the reversible cleavage of L-rhamnulose-1- phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde
GAPBOOJH_01940 0.0 V FtsX-like permease family
GAPBOOJH_01941 1.2e-135 cysA V ABC transporter, ATP-binding protein
GAPBOOJH_01942 0.0 E amino acid
GAPBOOJH_01943 1.4e-164 yegS 2.7.1.107 I Diacylglycerol kinase catalytic domain
GAPBOOJH_01944 6.9e-237 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GAPBOOJH_01945 5.7e-111 nodB3 G Polysaccharide deacetylase
GAPBOOJH_01946 0.0 M Sulfatase
GAPBOOJH_01947 3e-174 S EpsG family
GAPBOOJH_01948 7.4e-83 epsG 2.7.10.1 D Capsular exopolysaccharide family
GAPBOOJH_01949 1.6e-99 ywqC M capsule polysaccharide biosynthetic process
GAPBOOJH_01950 1.6e-247 S polysaccharide biosynthetic process
GAPBOOJH_01951 3.8e-199 M Glycosyl transferases group 1
GAPBOOJH_01952 1.8e-120 tagF 2.7.8.12 M Glycosyltransferase like family 2
GAPBOOJH_01953 1.3e-222 S Bacterial membrane protein, YfhO
GAPBOOJH_01954 2.4e-300 M Glycosyl hydrolases family 25
GAPBOOJH_01955 5.8e-179 M Dolichyl-phosphate-mannose-protein mannosyltransferase
GAPBOOJH_01956 1.9e-112 icaC M Acyltransferase family
GAPBOOJH_01957 5.8e-159 ykoT GT2 M Glycosyl transferase family 2
GAPBOOJH_01958 1.9e-198 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
GAPBOOJH_01959 1.6e-85
GAPBOOJH_01960 1.5e-253 wcaJ M Bacterial sugar transferase
GAPBOOJH_01961 1.4e-133 M Glycosyltransferase sugar-binding region containing DXD motif
GAPBOOJH_01962 2.1e-113 tuaG GT2 M Glycosyltransferase like family 2
GAPBOOJH_01963 9.2e-175 cps2D 5.1.3.2 M RmlD substrate binding domain
GAPBOOJH_01964 1.1e-110 glnP P ABC transporter permease
GAPBOOJH_01965 7.9e-109 gluC P ABC transporter permease
GAPBOOJH_01966 6.5e-148 glnH ET ABC transporter substrate-binding protein
GAPBOOJH_01967 4.8e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GAPBOOJH_01968 1.3e-171
GAPBOOJH_01970 5.6e-85 zur P Belongs to the Fur family
GAPBOOJH_01971 1.8e-08
GAPBOOJH_01972 9.3e-112 gmk2 2.7.4.8 F Guanylate kinase
GAPBOOJH_01973 2.8e-67 K Acetyltransferase (GNAT) domain
GAPBOOJH_01974 5.6e-124 spl M NlpC/P60 family
GAPBOOJH_01975 2e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GAPBOOJH_01976 2.6e-161 yeaB P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GAPBOOJH_01977 1.4e-53 arsR K helix_turn_helix, Arsenical Resistance Operon Repressor
GAPBOOJH_01978 1.3e-173 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GAPBOOJH_01979 0.0 malQ 2.4.1.25, 3.2.1.20, 3.2.1.41 CBM48,GH13,GH31,GH77 G Belongs to the glycosyl hydrolase 13 family
GAPBOOJH_01980 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
GAPBOOJH_01981 3.1e-286 glgA 2.4.1.21 GT5 F Synthesizes alpha-1,4-glucan chains using ADP-glucose
GAPBOOJH_01982 1.7e-23 glgD 2.4.1.21, 2.7.7.27 GT5 G Nucleotidyl transferase
GAPBOOJH_01983 9.5e-155 glgD 2.4.1.21, 2.7.7.27 GT5 G Nucleotidyl transferase
GAPBOOJH_01984 1.7e-197 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
GAPBOOJH_01985 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
GAPBOOJH_01986 4.7e-204 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
GAPBOOJH_01987 1.3e-112 ylcC 3.4.22.70 M Sortase family
GAPBOOJH_01988 3.4e-144 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GAPBOOJH_01989 0.0 fbp 3.1.3.11 G phosphatase activity
GAPBOOJH_01990 5.7e-65 nrp 1.20.4.1 P ArsC family
GAPBOOJH_01991 0.0 clpL O associated with various cellular activities
GAPBOOJH_01992 7.6e-143 ywqE 3.1.3.48 GM PHP domain protein
GAPBOOJH_01993 2.4e-156 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GAPBOOJH_01994 9.2e-76 cpsE M Bacterial sugar transferase
GAPBOOJH_01995 1.5e-155 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
GAPBOOJH_01996 1.3e-201 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
GAPBOOJH_01997 8.6e-107 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
GAPBOOJH_01998 2.2e-162 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
GAPBOOJH_01999 7.7e-63 wcmJ S SPTR Capsular exopolysaccharide biosynthesis protein (Wzm)
GAPBOOJH_02000 1.8e-57 cps1B GT2,GT4 M Glycosyl transferases group 1
GAPBOOJH_02001 6.6e-07 S EpsG family
GAPBOOJH_02002 2.5e-72 rgpB GT2 M Glycosyl transferase family 2
GAPBOOJH_02003 1.1e-25 rfbF GT2 V Glycosyl transferase, family 2
GAPBOOJH_02004 3.3e-43 wbbK M Glycosyl transferases group 1
GAPBOOJH_02005 8.9e-38 wbbL S Glycosyl transferase family 2
GAPBOOJH_02006 3e-89 cps2J S Polysaccharide biosynthesis protein
GAPBOOJH_02007 2.6e-111 ywqD 2.7.10.1 D Capsular exopolysaccharide family
GAPBOOJH_02008 1e-109 epsB M biosynthesis protein
GAPBOOJH_02009 2.8e-131 E lipolytic protein G-D-S-L family
GAPBOOJH_02010 1.1e-81 ccl S QueT transporter
GAPBOOJH_02011 1.5e-124 IQ Enoyl-(Acyl carrier protein) reductase
GAPBOOJH_02012 1.4e-36 XK27_01315 S Protein of unknown function (DUF2829)
GAPBOOJH_02013 5e-48 K Cro/C1-type HTH DNA-binding domain
GAPBOOJH_02014 3.3e-115 gpm5 3.1.3.3, 5.4.2.11 G Phosphoglycerate mutase family
GAPBOOJH_02015 1.5e-180 oppF P Belongs to the ABC transporter superfamily
GAPBOOJH_02016 1.3e-196 oppD P Belongs to the ABC transporter superfamily
GAPBOOJH_02017 1.4e-176 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
GAPBOOJH_02018 3e-162 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
GAPBOOJH_02019 7.4e-305 oppA E ABC transporter, substratebinding protein
GAPBOOJH_02020 1.8e-254 EGP Major facilitator Superfamily
GAPBOOJH_02021 2.2e-99 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GAPBOOJH_02022 6.4e-128 yrjD S LUD domain
GAPBOOJH_02023 1e-289 lutB C 4Fe-4S dicluster domain
GAPBOOJH_02024 4.7e-148 lutA C Cysteine-rich domain
GAPBOOJH_02025 9.1e-101
GAPBOOJH_02026 2.8e-52 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
GAPBOOJH_02027 1.5e-211 S Bacterial protein of unknown function (DUF871)
GAPBOOJH_02028 1.8e-69 S Domain of unknown function (DUF3284)
GAPBOOJH_02029 4e-270 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GAPBOOJH_02030 0.0 rafA 3.2.1.22 G alpha-galactosidase
GAPBOOJH_02031 1.4e-133 S Belongs to the UPF0246 family
GAPBOOJH_02032 9.1e-133 XK27_05520 S Uncharacterized protein conserved in bacteria (DUF2087)
GAPBOOJH_02033 1.4e-84 VPA1266 3.1.11.5 L Helix-hairpin-helix containing domain
GAPBOOJH_02034 0.0 VPA1266 3.1.11.5 L Helix-hairpin-helix containing domain
GAPBOOJH_02035 1.3e-108
GAPBOOJH_02036 2e-101 S WxL domain surface cell wall-binding
GAPBOOJH_02037 1e-145 frlD 2.7.1.218 G pfkB family carbohydrate kinase
GAPBOOJH_02038 5.7e-286 G Phosphodiester glycosidase
GAPBOOJH_02040 1.2e-288 apc3 3.5.2.9 EQ Hydantoinase/oxoprolinase N-terminal region
GAPBOOJH_02041 6.9e-206 S Protein of unknown function (DUF917)
GAPBOOJH_02042 3.5e-222 F Permease for cytosine/purines, uracil, thiamine, allantoin
GAPBOOJH_02043 1.3e-116
GAPBOOJH_02044 3e-66 3.1.21.3 V Type I restriction modification DNA specificity domain protein
GAPBOOJH_02045 2e-166 L Belongs to the 'phage' integrase family
GAPBOOJH_02046 9.8e-84 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
GAPBOOJH_02047 1.9e-215 hsdM 2.1.1.72 V type I restriction-modification system
GAPBOOJH_02048 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
GAPBOOJH_02049 7e-212 ykiI
GAPBOOJH_02050 0.0 pip V domain protein
GAPBOOJH_02051 0.0 scrA 2.7.1.211 G phosphotransferase system
GAPBOOJH_02052 0.0 malA 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain protein
GAPBOOJH_02053 1.5e-175 5.1.1.1 K Periplasmic binding proteins and sugar binding domain of LacI family
GAPBOOJH_02054 9.4e-299 scrB 3.2.1.26 GH32 G invertase
GAPBOOJH_02056 7.8e-160 azoB GM NmrA-like family
GAPBOOJH_02057 6.5e-234 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
GAPBOOJH_02058 2e-143 accA 2.1.3.15, 6.4.1.2 I alpha subunit
GAPBOOJH_02059 5.3e-150 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
GAPBOOJH_02060 3.6e-260 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
GAPBOOJH_02061 1.2e-76 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
GAPBOOJH_02062 1.1e-43 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
GAPBOOJH_02063 2e-222 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
GAPBOOJH_02064 2.8e-126 IQ reductase
GAPBOOJH_02065 8.5e-165 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
GAPBOOJH_02066 2.4e-173 fabK 1.3.1.9 S Nitronate monooxygenase
GAPBOOJH_02067 4.5e-33 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
GAPBOOJH_02068 1.8e-173 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GAPBOOJH_02069 4.7e-76 marR K Winged helix DNA-binding domain
GAPBOOJH_02070 9e-72 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
GAPBOOJH_02071 2.2e-190 I carboxylic ester hydrolase activity
GAPBOOJH_02072 2e-227 bdhA C Iron-containing alcohol dehydrogenase
GAPBOOJH_02073 7.1e-62 P Rhodanese-like domain
GAPBOOJH_02074 5.7e-84 yetL K helix_turn_helix multiple antibiotic resistance protein
GAPBOOJH_02075 3.5e-80 2.7.7.65 T diguanylate cyclase activity
GAPBOOJH_02076 5.3e-202 ydaN S Bacterial cellulose synthase subunit
GAPBOOJH_02077 2.1e-182 ydaM M Glycosyl transferase family group 2
GAPBOOJH_02078 5.8e-81 S Protein conserved in bacteria
GAPBOOJH_02079 8.6e-74
GAPBOOJH_02080 2.1e-80 G Belongs to the glycosyl hydrolase 8 (cellulase D) family
GAPBOOJH_02081 5.3e-58 2.7.7.65 T diguanylate cyclase
GAPBOOJH_02082 5.7e-162 nox C NADH oxidase
GAPBOOJH_02083 3.7e-72 yliE T Putative diguanylate phosphodiesterase
GAPBOOJH_02084 4.3e-26
GAPBOOJH_02085 3.7e-67 K MarR family
GAPBOOJH_02086 1.2e-10 S response to antibiotic
GAPBOOJH_02087 1.2e-159 S Putative esterase
GAPBOOJH_02088 6.4e-183
GAPBOOJH_02089 3.5e-103 rmaB K Transcriptional regulator, MarR family
GAPBOOJH_02090 1.3e-84 F NUDIX domain
GAPBOOJH_02091 3.5e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GAPBOOJH_02092 3.4e-29
GAPBOOJH_02093 4.4e-125 S zinc-ribbon domain
GAPBOOJH_02094 2e-197 pbpX1 V Beta-lactamase
GAPBOOJH_02095 1.5e-181 K AI-2E family transporter
GAPBOOJH_02096 1.1e-127 srtA 3.4.22.70 M Sortase family
GAPBOOJH_02097 1.5e-65 gtcA S Teichoic acid glycosylation protein
GAPBOOJH_02098 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
GAPBOOJH_02099 1.6e-168 gbuC E glycine betaine
GAPBOOJH_02100 1.8e-124 proW E glycine betaine
GAPBOOJH_02101 6.5e-221 gbuA 3.6.3.32 E glycine betaine
GAPBOOJH_02102 4.4e-132 sfsA S Belongs to the SfsA family
GAPBOOJH_02103 1.6e-66 usp1 T Universal stress protein family
GAPBOOJH_02104 1.8e-250 yxbA 6.3.1.12 S ATP-grasp enzyme
GAPBOOJH_02105 3.4e-155 thrB 2.7.1.39, 4.2.3.1 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
GAPBOOJH_02106 1.4e-281 thrC 4.2.3.1 E Threonine synthase
GAPBOOJH_02107 1.3e-229 hom 1.1.1.3 E homoserine dehydrogenase
GAPBOOJH_02108 6.7e-251 yclM 2.7.2.4 E Belongs to the aspartokinase family
GAPBOOJH_02109 5.8e-166 yqiK S SPFH domain / Band 7 family
GAPBOOJH_02110 5.7e-68
GAPBOOJH_02111 1.5e-154 pfoS S Phosphotransferase system, EIIC
GAPBOOJH_02112 5.9e-180 ldhA 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GAPBOOJH_02113 4.2e-217 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
GAPBOOJH_02114 6.2e-126 WQ51_05710 S Mitochondrial biogenesis AIM24
GAPBOOJH_02115 6e-143 S Alpha/beta hydrolase family
GAPBOOJH_02116 2.3e-102 K Bacterial regulatory proteins, tetR family
GAPBOOJH_02117 1.2e-171 XK27_06930 V domain protein
GAPBOOJH_02118 2.1e-171 yeaB P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GAPBOOJH_02119 0.0 asnB 6.3.5.4 E Asparagine synthase
GAPBOOJH_02120 2.2e-08
GAPBOOJH_02121 5.2e-206 S Calcineurin-like phosphoesterase
GAPBOOJH_02122 1.5e-161 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
GAPBOOJH_02123 7.3e-175 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GAPBOOJH_02124 1.2e-222 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GAPBOOJH_02125 8.8e-167 natA S ABC transporter
GAPBOOJH_02126 1.6e-209 ysdA CP ABC-2 family transporter protein
GAPBOOJH_02127 8.1e-64 K helix_turn_helix gluconate operon transcriptional repressor
GAPBOOJH_02128 4.9e-162 CcmA V ABC transporter
GAPBOOJH_02129 5.7e-115 VPA0052 I ABC-2 family transporter protein
GAPBOOJH_02130 5.8e-146 IQ reductase
GAPBOOJH_02131 9.3e-259 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GAPBOOJH_02132 0.0 bglP 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
GAPBOOJH_02133 1.7e-159 licT K CAT RNA binding domain
GAPBOOJH_02134 3.2e-284 cydC V ABC transporter transmembrane region
GAPBOOJH_02135 6.1e-310 cydD CO ABC transporter transmembrane region
GAPBOOJH_02136 1.7e-75 ynhH S NusG domain II
GAPBOOJH_02137 2.8e-170 M Peptidoglycan-binding domain 1 protein
GAPBOOJH_02139 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
GAPBOOJH_02140 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
GAPBOOJH_02141 6.5e-182 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
GAPBOOJH_02142 1.8e-278 cydA 1.10.3.14 C ubiquinol oxidase
GAPBOOJH_02143 4.1e-237 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
GAPBOOJH_02144 6.5e-174 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
GAPBOOJH_02145 1.7e-37
GAPBOOJH_02146 4.9e-87
GAPBOOJH_02147 2.7e-24
GAPBOOJH_02148 5.2e-162 yicL EG EamA-like transporter family
GAPBOOJH_02149 1.9e-112 tag 3.2.2.20 L glycosylase
GAPBOOJH_02150 4.2e-77 usp5 T universal stress protein
GAPBOOJH_02151 4.7e-64 K Helix-turn-helix XRE-family like proteins
GAPBOOJH_02152 4.9e-145 ptp3 3.1.3.48 T Tyrosine phosphatase family
GAPBOOJH_02153 1.3e-223 queG 1.17.99.6 C Domain of unknown function (DUF1730)
GAPBOOJH_02154 4.1e-62
GAPBOOJH_02155 1.4e-87 bioY S BioY family
GAPBOOJH_02157 5.4e-102 Q methyltransferase
GAPBOOJH_02158 2.6e-98 T Sh3 type 3 domain protein
GAPBOOJH_02159 3.9e-113 yfeJ 6.3.5.2 F glutamine amidotransferase
GAPBOOJH_02160 8e-137 S Uncharacterized protein conserved in bacteria (DUF2263)
GAPBOOJH_02161 4.9e-257 yhdP S Transporter associated domain
GAPBOOJH_02162 7.2e-144 S Alpha beta hydrolase
GAPBOOJH_02163 3e-195 I Acyltransferase
GAPBOOJH_02164 3.1e-262 lmrB EGP Major facilitator Superfamily
GAPBOOJH_02165 8.8e-84 S Domain of unknown function (DUF4811)
GAPBOOJH_02166 4.2e-95 maf D nucleoside-triphosphate diphosphatase activity
GAPBOOJH_02167 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
GAPBOOJH_02168 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
GAPBOOJH_02169 0.0 ydaO E amino acid
GAPBOOJH_02170 1.1e-56 S Domain of unknown function (DUF1827)
GAPBOOJH_02171 4.5e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
GAPBOOJH_02172 6.7e-44 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GAPBOOJH_02173 7.2e-110 ydiL S CAAX protease self-immunity
GAPBOOJH_02174 3.7e-196 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GAPBOOJH_02175 1.2e-183
GAPBOOJH_02176 9.7e-158 ytrB V ABC transporter
GAPBOOJH_02177 1e-60 ytrA K helix_turn_helix gluconate operon transcriptional repressor
GAPBOOJH_02178 4.2e-118 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
GAPBOOJH_02179 0.0 uup S ABC transporter, ATP-binding protein
GAPBOOJH_02180 1.6e-49 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
GAPBOOJH_02181 1.8e-187 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GAPBOOJH_02182 2.3e-98 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
GAPBOOJH_02183 5.3e-130 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
GAPBOOJH_02184 7e-119
GAPBOOJH_02185 7.3e-89 folT 2.7.13.3 T ECF transporter, substrate-specific component
GAPBOOJH_02186 1.5e-180 ansA 3.5.1.1 EJ Asparaginase
GAPBOOJH_02187 1.3e-142 fat 3.1.2.21 I Acyl-ACP thioesterase
GAPBOOJH_02188 1.7e-151 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GAPBOOJH_02189 1.7e-57 yabA L Involved in initiation control of chromosome replication
GAPBOOJH_02190 1.3e-174 holB 2.7.7.7 L DNA polymerase III
GAPBOOJH_02191 7.8e-52 yaaQ S Cyclic-di-AMP receptor
GAPBOOJH_02192 2.2e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GAPBOOJH_02193 8.7e-38 S Protein of unknown function (DUF2508)
GAPBOOJH_02194 5.6e-109 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GAPBOOJH_02195 1.5e-33 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
GAPBOOJH_02196 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GAPBOOJH_02197 8.9e-87 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
GAPBOOJH_02198 4.7e-49
GAPBOOJH_02199 3.4e-106 rsmC 2.1.1.172 J Methyltransferase
GAPBOOJH_02200 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
GAPBOOJH_02201 4.7e-70 tnpB L Putative transposase DNA-binding domain
GAPBOOJH_02202 1.4e-133 tnpB L Putative transposase DNA-binding domain
GAPBOOJH_02204 8.2e-67
GAPBOOJH_02205 3.3e-172 ccpB 5.1.1.1 K lacI family
GAPBOOJH_02206 0.0 prtS 3.4.21.110, 3.4.21.96 O Belongs to the peptidase S8 family
GAPBOOJH_02207 1.7e-154 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
GAPBOOJH_02208 3.8e-55 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
GAPBOOJH_02209 7.7e-83 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GAPBOOJH_02210 3.2e-171 mdtG EGP Major facilitator Superfamily
GAPBOOJH_02211 5e-221 yceI G Sugar (and other) transporter
GAPBOOJH_02212 2.8e-22
GAPBOOJH_02213 1.2e-226
GAPBOOJH_02214 5.8e-288 2.4.1.52 GT4 M Glycosyl transferases group 1
GAPBOOJH_02215 3.3e-302 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
GAPBOOJH_02216 3.3e-261 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
GAPBOOJH_02217 2.7e-94 yqaB S Acetyltransferase (GNAT) domain
GAPBOOJH_02218 1.3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
GAPBOOJH_02219 4.8e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GAPBOOJH_02220 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
GAPBOOJH_02221 2.1e-266 nylA 3.5.1.4 J Belongs to the amidase family
GAPBOOJH_02222 2.4e-90 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S Cobalamin adenosyltransferase
GAPBOOJH_02223 6.1e-86 S ECF transporter, substrate-specific component
GAPBOOJH_02224 3.1e-63 S Domain of unknown function (DUF4430)
GAPBOOJH_02225 0.0 rtpR 1.1.98.6, 1.17.4.1, 1.17.4.2 F ribonucleoside-triphosphate reductase activity
GAPBOOJH_02226 5.9e-79 F nucleoside 2-deoxyribosyltransferase
GAPBOOJH_02227 2.9e-159 S Alpha/beta hydrolase of unknown function (DUF915)
GAPBOOJH_02228 1.5e-100 nusG K Participates in transcription elongation, termination and antitermination
GAPBOOJH_02229 1.5e-22 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
GAPBOOJH_02230 8.5e-22 rpmG J Belongs to the bacterial ribosomal protein bL33 family
GAPBOOJH_02231 3.2e-170 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
GAPBOOJH_02232 1.1e-164 menA 2.5.1.74 M UbiA prenyltransferase family
GAPBOOJH_02234 2e-194 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GAPBOOJH_02235 2.6e-219 tnpB L Putative transposase DNA-binding domain
GAPBOOJH_02236 4.6e-139 cad S FMN_bind
GAPBOOJH_02237 8.2e-221 ndh 1.6.99.3 C NADH dehydrogenase
GAPBOOJH_02238 1.1e-192 L Transposase and inactivated derivatives, IS30 family
GAPBOOJH_02239 2.6e-127 ndh 1.6.99.3 C NADH dehydrogenase
GAPBOOJH_02240 1.7e-81 ynhH S NusG domain II
GAPBOOJH_02241 5.2e-99 gerCA 2.5.1.30 S Heptaprenyl diphosphate synthase component I
GAPBOOJH_02242 4.5e-180 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GAPBOOJH_02243 2.7e-80
GAPBOOJH_02244 6.9e-147 T Calcineurin-like phosphoesterase superfamily domain
GAPBOOJH_02245 4.6e-97
GAPBOOJH_02246 2.6e-158
GAPBOOJH_02247 2.7e-152 V ATPases associated with a variety of cellular activities
GAPBOOJH_02248 7.1e-215
GAPBOOJH_02249 2.4e-193
GAPBOOJH_02250 2.5e-121 1.5.1.40 S Rossmann-like domain
GAPBOOJH_02251 6.1e-191 XK27_00915 C Luciferase-like monooxygenase
GAPBOOJH_02252 1.2e-97 yacP S YacP-like NYN domain
GAPBOOJH_02253 7e-144 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GAPBOOJH_02254 2.1e-73 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
GAPBOOJH_02255 2.5e-272 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
GAPBOOJH_02256 3.3e-245 loxD 1.1.3.15 C FAD linked oxidases, C-terminal domain
GAPBOOJH_02257 8.6e-99
GAPBOOJH_02259 3.3e-259 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GAPBOOJH_02260 1e-140 yhfC S Putative membrane peptidase family (DUF2324)
GAPBOOJH_02261 1.8e-155 S Membrane
GAPBOOJH_02262 2.8e-61 K helix_turn_helix gluconate operon transcriptional repressor
GAPBOOJH_02263 2.9e-293 V ABC transporter transmembrane region
GAPBOOJH_02264 4.4e-223 inlJ M MucBP domain
GAPBOOJH_02265 1.9e-69 S ABC-2 family transporter protein
GAPBOOJH_02266 3.1e-95 V ABC transporter, ATP-binding protein
GAPBOOJH_02267 1.4e-108 K sequence-specific DNA binding
GAPBOOJH_02268 1.8e-201 yacL S domain protein
GAPBOOJH_02269 8.5e-254 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GAPBOOJH_02270 1.9e-100 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTPase
GAPBOOJH_02271 4.2e-49 HA62_12640 S GCN5-related N-acetyl-transferase
GAPBOOJH_02272 2.7e-257 pepC 3.4.22.40 E aminopeptidase
GAPBOOJH_02273 3.8e-262 pepC 3.4.22.40 E Peptidase C1-like family
GAPBOOJH_02274 3.6e-194
GAPBOOJH_02275 1.9e-209 S ABC-2 family transporter protein
GAPBOOJH_02276 4.3e-166 V ATPases associated with a variety of cellular activities
GAPBOOJH_02277 0.0 kup P Transport of potassium into the cell
GAPBOOJH_02278 0.0 ppdK 2.7.9.1 G Belongs to the PEP-utilizing enzyme family
GAPBOOJH_02279 1.5e-92 ccpN K Domain in cystathionine beta-synthase and other proteins.
GAPBOOJH_02280 1.9e-121 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GAPBOOJH_02281 4e-201 ltrA S Bacterial low temperature requirement A protein (LtrA)
GAPBOOJH_02282 7.2e-46
GAPBOOJH_02283 2.8e-194 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
GAPBOOJH_02284 8.8e-09 yhjA S CsbD-like
GAPBOOJH_02285 3.1e-151 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
GAPBOOJH_02286 9.2e-191 EGP Major facilitator Superfamily
GAPBOOJH_02287 8.5e-115 udp 2.4.2.3, 3.2.2.4 F Phosphorylase superfamily
GAPBOOJH_02288 7.3e-172 EGP Major facilitator Superfamily
GAPBOOJH_02289 5.3e-95 KT Purine catabolism regulatory protein-like family
GAPBOOJH_02290 5.4e-08
GAPBOOJH_02291 2.5e-32
GAPBOOJH_02292 1.1e-32
GAPBOOJH_02293 4.9e-224 pimH EGP Major facilitator Superfamily
GAPBOOJH_02294 2e-225 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
GAPBOOJH_02295 3e-148 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
GAPBOOJH_02297 8.7e-93
GAPBOOJH_02298 9.8e-33 bacI V MacB-like periplasmic core domain
GAPBOOJH_02299 3.1e-55 macB V ABC transporter, ATP-binding protein
GAPBOOJH_02301 3.2e-128 3.4.22.70 M Sortase family
GAPBOOJH_02302 8.4e-290 M Cna protein B-type domain
GAPBOOJH_02303 5.1e-259 M domain protein
GAPBOOJH_02304 0.0 M domain protein
GAPBOOJH_02305 3.3e-103
GAPBOOJH_02306 4.3e-225 N Uncharacterized conserved protein (DUF2075)
GAPBOOJH_02307 1.8e-206 MA20_36090 S Protein of unknown function (DUF2974)
GAPBOOJH_02308 4.1e-97 K Helix-turn-helix XRE-family like proteins
GAPBOOJH_02309 1.4e-56 K Transcriptional regulator PadR-like family
GAPBOOJH_02310 7.1e-136
GAPBOOJH_02311 6.6e-134
GAPBOOJH_02312 9e-44 S Enterocin A Immunity
GAPBOOJH_02313 2.7e-186 tas C Aldo/keto reductase family
GAPBOOJH_02314 2.5e-253 yjjP S Putative threonine/serine exporter
GAPBOOJH_02315 7e-59
GAPBOOJH_02316 2.9e-225 mesE M Transport protein ComB
GAPBOOJH_02317 1e-279 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
GAPBOOJH_02318 2.6e-266 L Transposase DDE domain
GAPBOOJH_02319 3.3e-112 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
GAPBOOJH_02321 3.3e-218 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GAPBOOJH_02322 7.3e-133 plnD K LytTr DNA-binding domain
GAPBOOJH_02323 1.9e-44 spiA S Enterocin A Immunity
GAPBOOJH_02324 5.8e-21
GAPBOOJH_02328 4.4e-133 S CAAX protease self-immunity
GAPBOOJH_02329 9.3e-69 K Transcriptional regulator
GAPBOOJH_02330 6.4e-252 EGP Major Facilitator Superfamily
GAPBOOJH_02331 2.4e-53
GAPBOOJH_02332 1.9e-53 S Enterocin A Immunity
GAPBOOJH_02333 1.7e-179 S Aldo keto reductase
GAPBOOJH_02334 7.1e-130 S Belongs to the short-chain dehydrogenases reductases (SDR) family
GAPBOOJH_02335 4.5e-216 yqiG C Oxidoreductase
GAPBOOJH_02336 1.3e-16 S Short C-terminal domain
GAPBOOJH_02337 9.5e-253 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
GAPBOOJH_02338 2.1e-133
GAPBOOJH_02339 2e-17
GAPBOOJH_02340 5.3e-279 mntH P H( )-stimulated, divalent metal cation uptake system
GAPBOOJH_02341 0.0 pacL P P-type ATPase
GAPBOOJH_02342 9.8e-64
GAPBOOJH_02343 6.5e-227 EGP Major Facilitator Superfamily
GAPBOOJH_02344 2.1e-311 mco Q Multicopper oxidase
GAPBOOJH_02345 1e-24
GAPBOOJH_02346 1.7e-111 2.5.1.105 P Cation efflux family
GAPBOOJH_02347 8.7e-51 czrA K Transcriptional regulator, ArsR family
GAPBOOJH_02348 5.4e-175 sitA P Belongs to the bacterial solute-binding protein 9 family
GAPBOOJH_02349 9.5e-145 mtsB U ABC 3 transport family
GAPBOOJH_02350 1.9e-130 mntB 3.6.3.35 P ABC transporter
GAPBOOJH_02351 2.7e-42 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GAPBOOJH_02352 7.7e-166 znuA P Belongs to the bacterial solute-binding protein 9 family
GAPBOOJH_02353 1.4e-118 GM NmrA-like family
GAPBOOJH_02354 4.9e-85
GAPBOOJH_02355 1.3e-162 znuA P Belongs to the bacterial solute-binding protein 9 family
GAPBOOJH_02356 1.8e-19
GAPBOOJH_02358 3.4e-53 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GAPBOOJH_02359 1.2e-65 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GAPBOOJH_02360 1.4e-286 G MFS/sugar transport protein
GAPBOOJH_02361 0.0 3.2.1.40 G Bacterial alpha-L-rhamnosidase concanavalin-like domain
GAPBOOJH_02362 1.6e-169 ssuA P NMT1-like family
GAPBOOJH_02363 1.4e-292 6.2.1.3, 6.2.1.8 IQ AMP-binding enzyme C-terminal domain
GAPBOOJH_02364 3.4e-233 yfiQ I Acyltransferase family
GAPBOOJH_02365 1.3e-120 ssuB P ATPases associated with a variety of cellular activities
GAPBOOJH_02366 6e-146 ssuC U Binding-protein-dependent transport system inner membrane component
GAPBOOJH_02367 3.8e-122 S B3/4 domain
GAPBOOJH_02369 3.3e-29 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
GAPBOOJH_02370 8.6e-15
GAPBOOJH_02371 0.0 V ABC transporter
GAPBOOJH_02372 0.0 V ATPases associated with a variety of cellular activities
GAPBOOJH_02373 1.4e-207 EGP Transmembrane secretion effector
GAPBOOJH_02374 1.1e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
GAPBOOJH_02375 7e-80 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GAPBOOJH_02376 4.8e-103 K Bacterial regulatory proteins, tetR family
GAPBOOJH_02377 9.4e-184 yxeA V FtsX-like permease family
GAPBOOJH_02378 1.3e-125 devA 3.6.3.25 V ATPases associated with a variety of cellular activities
GAPBOOJH_02379 6.4e-34
GAPBOOJH_02380 2e-135 tipA K TipAS antibiotic-recognition domain
GAPBOOJH_02381 4.2e-138 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
GAPBOOJH_02382 1.6e-143 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GAPBOOJH_02383 3.2e-158 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GAPBOOJH_02384 1.8e-153 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GAPBOOJH_02385 7.6e-115
GAPBOOJH_02386 3.1e-60 rplQ J Ribosomal protein L17
GAPBOOJH_02387 3.6e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GAPBOOJH_02388 4e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GAPBOOJH_02389 2.1e-58 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GAPBOOJH_02390 6.6e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
GAPBOOJH_02391 1.4e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GAPBOOJH_02392 1.4e-121 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
GAPBOOJH_02393 9.8e-231 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
GAPBOOJH_02394 2.2e-62 rplO J Binds to the 23S rRNA
GAPBOOJH_02395 1.7e-24 rpmD J Ribosomal protein L30
GAPBOOJH_02396 1.2e-83 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GAPBOOJH_02397 4.6e-58 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GAPBOOJH_02398 2.3e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GAPBOOJH_02399 1e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GAPBOOJH_02400 1.1e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GAPBOOJH_02401 2.4e-50 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GAPBOOJH_02402 2.1e-58 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GAPBOOJH_02403 1.4e-40 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GAPBOOJH_02404 1.1e-24 rpmC J Belongs to the universal ribosomal protein uL29 family
GAPBOOJH_02405 2.3e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GAPBOOJH_02406 3.7e-109 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GAPBOOJH_02407 1.1e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GAPBOOJH_02408 2.2e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GAPBOOJH_02409 3.9e-156 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GAPBOOJH_02410 2e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
GAPBOOJH_02411 5.9e-109 rplD J Forms part of the polypeptide exit tunnel
GAPBOOJH_02412 3e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GAPBOOJH_02413 1.2e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
GAPBOOJH_02414 1.2e-68 psiE S Phosphate-starvation-inducible E
GAPBOOJH_02415 1.7e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
GAPBOOJH_02416 5.5e-197 yfjR K WYL domain
GAPBOOJH_02417 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GAPBOOJH_02418 8.4e-84 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
GAPBOOJH_02419 3.6e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GAPBOOJH_02420 0.0 M domain protein
GAPBOOJH_02421 6.1e-38 M domain protein
GAPBOOJH_02422 2.6e-83 3.4.23.43
GAPBOOJH_02423 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GAPBOOJH_02424 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GAPBOOJH_02425 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GAPBOOJH_02426 3.6e-79 ctsR K Belongs to the CtsR family
GAPBOOJH_02435 6.8e-20 S the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts
GAPBOOJH_02436 2.4e-71 S COG NOG38524 non supervised orthologous group
GAPBOOJH_02439 6.1e-35
GAPBOOJH_02440 5.6e-291 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
GAPBOOJH_02441 2.9e-190 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GAPBOOJH_02442 1.9e-161 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
GAPBOOJH_02443 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GAPBOOJH_02444 5.9e-97 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
GAPBOOJH_02445 2.1e-241 tilS 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
GAPBOOJH_02446 5.2e-81 yabR J RNA binding
GAPBOOJH_02447 4.4e-65 divIC D cell cycle
GAPBOOJH_02448 1.8e-38 yabO J S4 domain protein
GAPBOOJH_02449 1.6e-280 yabM S Polysaccharide biosynthesis protein
GAPBOOJH_02450 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GAPBOOJH_02451 2.1e-102 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
GAPBOOJH_02452 4.1e-181 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
GAPBOOJH_02453 5.9e-263 S Putative peptidoglycan binding domain
GAPBOOJH_02454 2.9e-96 padR K Transcriptional regulator PadR-like family
GAPBOOJH_02455 1.1e-238 XK27_06930 S ABC-2 family transporter protein
GAPBOOJH_02456 3.4e-114 1.6.5.2 S Flavodoxin-like fold
GAPBOOJH_02457 5.1e-119 S (CBS) domain
GAPBOOJH_02458 1.8e-130 yciB M ErfK YbiS YcfS YnhG
GAPBOOJH_02459 4e-278 gltD 1.4.1.13, 1.4.1.14 E Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
GAPBOOJH_02460 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1, 2.1.1.21 E GXGXG motif
GAPBOOJH_02461 1.2e-86 S QueT transporter
GAPBOOJH_02462 1.4e-12
GAPBOOJH_02463 5.6e-62 ndoA L Toxic component of a toxin-antitoxin (TA) module
GAPBOOJH_02464 2.4e-37
GAPBOOJH_02465 1.6e-216 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GAPBOOJH_02466 1.7e-63 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
GAPBOOJH_02467 4.5e-264 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
GAPBOOJH_02468 5.6e-261 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
GAPBOOJH_02469 3.3e-146
GAPBOOJH_02470 1.9e-123 S Tetratricopeptide repeat
GAPBOOJH_02471 1.7e-122
GAPBOOJH_02472 1.4e-72
GAPBOOJH_02473 3.3e-42 rpmE2 J Ribosomal protein L31
GAPBOOJH_02474 2.8e-235 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GAPBOOJH_02476 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
GAPBOOJH_02477 5.9e-219 ndh 1.6.99.3 C NADH dehydrogenase
GAPBOOJH_02480 7.9e-152 S Protein of unknown function (DUF1211)
GAPBOOJH_02481 5.9e-62 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
GAPBOOJH_02482 3.5e-79 ywiB S Domain of unknown function (DUF1934)
GAPBOOJH_02483 6.7e-156 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
GAPBOOJH_02484 7.4e-266 ywfO S HD domain protein
GAPBOOJH_02485 2.4e-83 mutT 3.5.4.33, 3.6.1.13, 3.6.1.55 L NUDIX domain
GAPBOOJH_02486 5.9e-178 S DUF218 domain
GAPBOOJH_02487 1.8e-60 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GAPBOOJH_02488 1.6e-73
GAPBOOJH_02489 8.6e-51 nudA S ASCH
GAPBOOJH_02490 1e-176 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GAPBOOJH_02491 2.8e-212 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GAPBOOJH_02492 3.5e-219 ysaA V RDD family
GAPBOOJH_02493 1.3e-151 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
GAPBOOJH_02494 6.5e-119 ybbL S ABC transporter, ATP-binding protein
GAPBOOJH_02495 3.3e-122 ybbM S Uncharacterised protein family (UPF0014)
GAPBOOJH_02496 6.8e-156 czcD P cation diffusion facilitator family transporter
GAPBOOJH_02497 5.8e-163 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
GAPBOOJH_02498 1.1e-37 veg S Biofilm formation stimulator VEG
GAPBOOJH_02499 1.4e-153 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
GAPBOOJH_02500 1.6e-97 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
GAPBOOJH_02501 1.3e-145 tatD L hydrolase, TatD family
GAPBOOJH_02502 7.7e-80 manR 2.7.1.194, 2.7.1.200, 2.7.1.202 G phosphoenolpyruvate-dependent sugar phosphotransferase system
GAPBOOJH_02503 9.5e-186 yihT 4.1.2.40, 4.1.2.57 G Belongs to the aldolase LacD family
GAPBOOJH_02504 6.9e-172 yqhA G Aldose 1-epimerase
GAPBOOJH_02505 3e-125 T LytTr DNA-binding domain
GAPBOOJH_02506 4.5e-166 2.7.13.3 T GHKL domain
GAPBOOJH_02507 0.0 V ABC transporter
GAPBOOJH_02508 0.0 V ABC transporter
GAPBOOJH_02509 4.1e-30 K Transcriptional
GAPBOOJH_02510 2.2e-65
GAPBOOJH_02511 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GAPBOOJH_02512 1e-171 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
GAPBOOJH_02513 1.2e-146 yunF F Protein of unknown function DUF72
GAPBOOJH_02514 1.1e-91 3.6.1.55 F NUDIX domain
GAPBOOJH_02515 1.5e-169 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
GAPBOOJH_02516 5.3e-107 yiiE S Protein of unknown function (DUF1211)
GAPBOOJH_02517 2.2e-128 cobB K Sir2 family
GAPBOOJH_02518 1.2e-07
GAPBOOJH_02519 5.7e-169
GAPBOOJH_02520 1.9e-97 yxkA S Phosphatidylethanolamine-binding protein
GAPBOOJH_02522 4.2e-162 ypuA S Protein of unknown function (DUF1002)
GAPBOOJH_02523 2.5e-172 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
GAPBOOJH_02524 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
GAPBOOJH_02525 2.8e-285 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
GAPBOOJH_02526 3e-173 S Aldo keto reductase
GAPBOOJH_02527 9.3e-155 bioC 2.1.1.187, 2.1.1.197 Q Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
GAPBOOJH_02528 1.7e-90 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
GAPBOOJH_02529 1e-238 dinF V MatE
GAPBOOJH_02530 1.2e-109 S TPM domain
GAPBOOJH_02531 3.1e-102 lemA S LemA family
GAPBOOJH_02532 6.3e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
GAPBOOJH_02533 1.2e-73 EGP Major Facilitator Superfamily
GAPBOOJH_02534 5e-251 gshR 1.8.1.7 C Glutathione reductase
GAPBOOJH_02535 1.7e-176 proV E ABC transporter, ATP-binding protein
GAPBOOJH_02536 8.9e-276 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
GAPBOOJH_02537 0.0 helD 3.6.4.12 L DNA helicase
GAPBOOJH_02538 1.5e-147 rlrG K Transcriptional regulator
GAPBOOJH_02539 1.1e-175 shetA P Voltage-dependent anion channel
GAPBOOJH_02540 1.5e-135 nodJ V ABC-2 type transporter
GAPBOOJH_02541 3.2e-133 nodI V ABC transporter
GAPBOOJH_02542 6.8e-130 ydfF K Transcriptional
GAPBOOJH_02543 1.2e-109 S CAAX protease self-immunity
GAPBOOJH_02545 1.7e-277 V ABC transporter transmembrane region
GAPBOOJH_02546 6.7e-108 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
GAPBOOJH_02547 7.2e-71 K MarR family
GAPBOOJH_02548 0.0 uvrA3 L excinuclease ABC
GAPBOOJH_02549 1.4e-192 yghZ C Aldo keto reductase family protein
GAPBOOJH_02550 2.4e-142 S hydrolase
GAPBOOJH_02551 1.2e-58
GAPBOOJH_02552 4.8e-12
GAPBOOJH_02553 3.6e-115 yoaK S Protein of unknown function (DUF1275)
GAPBOOJH_02554 2.4e-127 yjhF G Phosphoglycerate mutase family
GAPBOOJH_02555 8.1e-151 yitU 3.1.3.104 S hydrolase
GAPBOOJH_02556 3.6e-90 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GAPBOOJH_02557 5.8e-166 K LysR substrate binding domain
GAPBOOJH_02558 1.3e-226 EK Aminotransferase, class I
GAPBOOJH_02560 2.9e-45
GAPBOOJH_02561 9.4e-58
GAPBOOJH_02562 5.6e-193 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GAPBOOJH_02563 7.3e-116 ydfK S Protein of unknown function (DUF554)
GAPBOOJH_02564 2.2e-87
GAPBOOJH_02566 0.0 fruA 2.7.1.194, 2.7.1.200, 2.7.1.202 GT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GAPBOOJH_02567 1.3e-168 pfkB 2.7.1.11, 2.7.1.144, 2.7.1.56 H pfkB family carbohydrate kinase
GAPBOOJH_02568 1.5e-130 rpl K Helix-turn-helix domain, rpiR family
GAPBOOJH_02569 2.8e-298 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
GAPBOOJH_02570 5.7e-288 ubiD 4.1.1.98 H 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
GAPBOOJH_02571 3.2e-101 ubiX 2.5.1.129 H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
GAPBOOJH_02572 5.6e-245 P Sodium:sulfate symporter transmembrane region
GAPBOOJH_02573 5.8e-158 K LysR substrate binding domain
GAPBOOJH_02574 1.3e-75
GAPBOOJH_02575 9e-72 K Transcriptional regulator
GAPBOOJH_02576 1.5e-245 ypiB EGP Major facilitator Superfamily
GAPBOOJH_02577 7.8e-129 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
GAPBOOJH_02579 4.3e-241 pts36C G PTS system sugar-specific permease component
GAPBOOJH_02580 1.1e-50 sgcB 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
GAPBOOJH_02581 3e-68 pts36A 2.7.1.194, 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GAPBOOJH_02582 1.2e-119 K DeoR C terminal sensor domain
GAPBOOJH_02584 4.4e-166 rhaD 4.1.2.17, 4.1.2.19 H Catalyzes the reversible cleavage of L-rhamnulose-1- phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde
GAPBOOJH_02585 9.1e-258 rhaA 2.7.1.5, 5.3.1.14 G L-rhamnose isomerase (RhaA)
GAPBOOJH_02586 3.8e-56 rhaM 5.1.3.32 G Involved in the anomeric conversion of L-rhamnose
GAPBOOJH_02587 4.5e-285 rhaB 2.7.1.12, 2.7.1.17, 2.7.1.5, 5.3.1.14 F Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate
GAPBOOJH_02588 8.8e-227 iolF EGP Major facilitator Superfamily
GAPBOOJH_02589 4.1e-192 rhaR K helix_turn_helix, arabinose operon control protein
GAPBOOJH_02590 6.4e-215 adhC 1.1.1.90 C Zn-dependent alcohol dehydrogenases, class III
GAPBOOJH_02591 1.4e-65 S Protein of unknown function (DUF1093)
GAPBOOJH_02592 1.3e-120
GAPBOOJH_02593 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
GAPBOOJH_02594 4.6e-305 plyA3 M Right handed beta helix region
GAPBOOJH_02595 2.9e-81
GAPBOOJH_02596 1.2e-269 M Heparinase II/III N-terminus
GAPBOOJH_02598 3.5e-66 G PTS system fructose IIA component
GAPBOOJH_02599 3.6e-143 agaD G PTS system mannose/fructose/sorbose family IID component
GAPBOOJH_02600 6.4e-132 G PTS system sorbose-specific iic component
GAPBOOJH_02601 3.5e-80 agaV 2.7.1.191 G PTS system sorbose subfamily IIB component
GAPBOOJH_02602 8.3e-205 ugl 3.2.1.180 GH88 S Glycosyl Hydrolase Family 88
GAPBOOJH_02603 8.4e-103 Z012_03480 S Psort location Cytoplasmic, score
GAPBOOJH_02604 1.9e-109 K Bacterial transcriptional regulator
GAPBOOJH_02605 1.7e-143 kduI 5.3.1.17 G Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
GAPBOOJH_02606 1e-137 IQ Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
GAPBOOJH_02607 2.3e-87 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
GAPBOOJH_02608 1.8e-152 kdgK 2.7.1.45 G pfkB family carbohydrate kinase
GAPBOOJH_02609 8.7e-122 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GAPBOOJH_02610 0.0 CP_0954 4.2.2.1 PL8 N Polysaccharide lyase family 8, N terminal alpha-helical domain
GAPBOOJH_02611 5.8e-198 rafA 3.2.1.22 G Melibiase
GAPBOOJH_02612 2.6e-266 L Transposase DDE domain
GAPBOOJH_02613 2.7e-40 2.7.1.191 G PTS system sorbose subfamily IIB component
GAPBOOJH_02614 3.1e-65 G PTS system mannose/fructose/sorbose family IID component
GAPBOOJH_02615 4.4e-64 G PTS system sorbose-specific iic component
GAPBOOJH_02616 2.7e-22 2.7.1.191 G phosphoenolpyruvate-dependent sugar phosphotransferase system
GAPBOOJH_02617 4.6e-53 araR K Transcriptional regulator
GAPBOOJH_02618 7.8e-271 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
GAPBOOJH_02619 3.6e-296 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
GAPBOOJH_02620 8.3e-208 V ABC-type multidrug transport system, ATPase and permease components
GAPBOOJH_02621 6.9e-108 K Transcriptional activator, Rgg GadR MutR family
GAPBOOJH_02622 7e-125 K Helix-turn-helix domain, rpiR family
GAPBOOJH_02623 5.2e-60 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GAPBOOJH_02624 2e-09 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GAPBOOJH_02626 3.7e-137 4.1.2.14 S KDGP aldolase
GAPBOOJH_02627 1.2e-202 selA 2.9.1.1 H L-seryl-tRNA selenium transferase
GAPBOOJH_02628 2.2e-215 dho 3.5.2.3 S Amidohydrolase family
GAPBOOJH_02629 1e-106 S Domain of unknown function (DUF4310)
GAPBOOJH_02630 1.7e-137 S Domain of unknown function (DUF4311)
GAPBOOJH_02631 1.7e-52 S Domain of unknown function (DUF4312)
GAPBOOJH_02632 1.2e-61 S Glycine-rich SFCGS
GAPBOOJH_02633 1.5e-53 S PRD domain
GAPBOOJH_02634 0.0 K Mga helix-turn-helix domain
GAPBOOJH_02635 2.9e-122 tal 2.2.1.2 H Pfam:Transaldolase
GAPBOOJH_02636 3.9e-63 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
GAPBOOJH_02637 1.6e-194 srlE 2.7.1.198 G Sorbitol phosphotransferase enzyme II N-terminus
GAPBOOJH_02638 2.2e-102 srlA G PTS system enzyme II sorbitol-specific factor
GAPBOOJH_02639 1.4e-87 gutM K Glucitol operon activator protein (GutM)
GAPBOOJH_02640 0.0 srlM 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT Mga helix-turn-helix domain
GAPBOOJH_02641 2.5e-144 IQ NAD dependent epimerase/dehydratase family
GAPBOOJH_02642 1.1e-192 L Transposase and inactivated derivatives, IS30 family
GAPBOOJH_02643 2.5e-24 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
GAPBOOJH_02644 1.5e-29 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
GAPBOOJH_02645 1.6e-137 araD 4.1.2.17, 4.1.2.19, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
GAPBOOJH_02646 5.3e-150 XK27_02985 S Sucrose-6F-phosphate phosphohydrolase
GAPBOOJH_02647 5.4e-167 ulaE 5.1.3.22 G Xylose isomerase-like TIM barrel
GAPBOOJH_02648 4.9e-137 repA K DeoR C terminal sensor domain
GAPBOOJH_02649 1.6e-114 ulaD 4.1.1.85, 4.1.2.43 G Orotidine 5'-phosphate decarboxylase / HUMPS family
GAPBOOJH_02650 1.4e-44 sgaB 2.7.1.194, 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
GAPBOOJH_02651 4.5e-280 ulaA S PTS system sugar-specific permease component
GAPBOOJH_02652 3.6e-79 cmtB 2.7.1.194, 2.7.1.197, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GAPBOOJH_02653 1.2e-213 ulaG S Beta-lactamase superfamily domain
GAPBOOJH_02654 0.0 O Belongs to the peptidase S8 family
GAPBOOJH_02655 2.6e-42
GAPBOOJH_02656 1.6e-155 bglK_1 GK ROK family
GAPBOOJH_02657 9.8e-180 aspG 3.4.19.5, 3.5.1.1, 3.5.1.26 E Asparaginase
GAPBOOJH_02658 4.1e-245 3.5.1.18 E Peptidase family M20/M25/M40
GAPBOOJH_02659 1.2e-129 ymfC K UTRA
GAPBOOJH_02660 5.3e-215 uhpT EGP Major facilitator Superfamily
GAPBOOJH_02661 4.7e-204 3.2.1.51 GH29 G Alpha-L-fucosidase
GAPBOOJH_02662 7.6e-91 yjgM K Acetyltransferase (GNAT) domain
GAPBOOJH_02663 3.7e-111 yjhB 3.6.1.13, 3.6.1.55 F NUDIX domain
GAPBOOJH_02665 2.8e-97 K Helix-turn-helix domain
GAPBOOJH_02666 0.0 sca1 G Belongs to the glycosyl hydrolase 31 family
GAPBOOJH_02667 9.6e-132 3.6.1.13, 3.6.1.55 F NUDIX domain
GAPBOOJH_02668 9.9e-108 pncA Q Isochorismatase family
GAPBOOJH_02669 1.8e-262 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GAPBOOJH_02670 3.6e-131 glpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
GAPBOOJH_02671 3.3e-68 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
GAPBOOJH_02672 6.4e-241 ugpB G Bacterial extracellular solute-binding protein
GAPBOOJH_02673 2.2e-148 ugpE G ABC transporter permease
GAPBOOJH_02674 4.7e-163 ugpA P ABC-type sugar transport systems, permease components
GAPBOOJH_02675 9.5e-211 ugpC 3.6.3.20 E Belongs to the ABC transporter superfamily
GAPBOOJH_02676 5.1e-224 EGP Major facilitator Superfamily
GAPBOOJH_02677 1.5e-146 3.5.2.6 V Beta-lactamase enzyme family
GAPBOOJH_02678 4.5e-191 blaA6 V Beta-lactamase
GAPBOOJH_02679 2.9e-146 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
GAPBOOJH_02680 6.9e-162 ybbH_2 K Helix-turn-helix domain, rpiR family
GAPBOOJH_02681 7.6e-80 2.7.1.191 G PTS system sorbose subfamily IIB component
GAPBOOJH_02682 2.4e-150 G PTS system mannose/fructose/sorbose family IID component
GAPBOOJH_02683 1.8e-129 G PTS system sorbose-specific iic component
GAPBOOJH_02685 2.7e-202 S endonuclease exonuclease phosphatase family protein
GAPBOOJH_02686 1.5e-172 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
GAPBOOJH_02687 8.5e-159 1.1.1.346 S reductase
GAPBOOJH_02688 2.5e-74 adhR K helix_turn_helix, mercury resistance
GAPBOOJH_02689 3.7e-142 Q Methyltransferase
GAPBOOJH_02690 9.1e-50 sugE U Multidrug resistance protein
GAPBOOJH_02692 1.2e-145 V ABC transporter transmembrane region
GAPBOOJH_02693 2.8e-57
GAPBOOJH_02694 5.9e-36
GAPBOOJH_02695 6.5e-108 S alpha beta
GAPBOOJH_02696 6.6e-79 MA20_25245 K FR47-like protein
GAPBOOJH_02697 1.7e-77 hisB 2.7.7.71, 3.1.3.15, 3.1.3.82, 3.1.3.83, 4.2.1.19, 5.3.1.28, 6.3.2.10 GT9 E HAD-hyrolase-like
GAPBOOJH_02698 2.7e-132 wzb 3.1.3.48 T Tyrosine phosphatase family
GAPBOOJH_02699 3.5e-85 K Acetyltransferase (GNAT) domain
GAPBOOJH_02700 1.3e-122
GAPBOOJH_02701 1.2e-66 6.3.3.2 S ASCH
GAPBOOJH_02702 5.2e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GAPBOOJH_02703 4.1e-198 ybiR P Citrate transporter
GAPBOOJH_02704 6.8e-100
GAPBOOJH_02705 7.3e-250 E Peptidase dimerisation domain
GAPBOOJH_02706 2.8e-296 E ABC transporter, substratebinding protein
GAPBOOJH_02707 1.3e-133
GAPBOOJH_02708 0.0 K helix_turn_helix, arabinose operon control protein
GAPBOOJH_02709 3.9e-282 G MFS/sugar transport protein
GAPBOOJH_02710 0.0 S Glycosyl hydrolase family 115
GAPBOOJH_02711 0.0 cadA P P-type ATPase
GAPBOOJH_02712 2.7e-76 hsp3 O Hsp20/alpha crystallin family
GAPBOOJH_02713 5.9e-70 S Iron-sulphur cluster biosynthesis
GAPBOOJH_02714 2.9e-206 htrA 3.4.21.107 O serine protease
GAPBOOJH_02715 2.7e-154 vicX 3.1.26.11 S domain protein
GAPBOOJH_02716 4.4e-141 yycI S YycH protein
GAPBOOJH_02717 5.3e-259 yycH S YycH protein
GAPBOOJH_02718 0.0 vicK 2.7.13.3 T Histidine kinase
GAPBOOJH_02719 8.1e-131 K response regulator
GAPBOOJH_02720 2.7e-123 S Alpha/beta hydrolase family
GAPBOOJH_02721 9.3e-259 arpJ P ABC transporter permease
GAPBOOJH_02722 8.8e-234 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
GAPBOOJH_02723 1.7e-265 argH 4.3.2.1 E argininosuccinate lyase
GAPBOOJH_02724 7e-214 S Bacterial protein of unknown function (DUF871)
GAPBOOJH_02725 1.2e-73 S Domain of unknown function (DUF3284)
GAPBOOJH_02726 3.8e-238 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GAPBOOJH_02727 6.9e-130 K UbiC transcription regulator-associated domain protein
GAPBOOJH_02728 3e-51 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
GAPBOOJH_02729 4.9e-54 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
GAPBOOJH_02730 1.7e-107 speG J Acetyltransferase (GNAT) domain
GAPBOOJH_02731 2.2e-81 F NUDIX domain
GAPBOOJH_02732 2.5e-89 S AAA domain
GAPBOOJH_02733 2.3e-113 ycaC Q Isochorismatase family
GAPBOOJH_02734 6.8e-254 ydiC1 EGP Major Facilitator Superfamily
GAPBOOJH_02735 8.3e-213 yeaN P Transporter, major facilitator family protein
GAPBOOJH_02736 5e-173 iolS C Aldo keto reductase
GAPBOOJH_02737 4.4e-64 manO S Domain of unknown function (DUF956)
GAPBOOJH_02738 8.7e-170 manN G system, mannose fructose sorbose family IID component
GAPBOOJH_02739 1.6e-122 manY G PTS system
GAPBOOJH_02740 1.3e-182 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
GAPBOOJH_02741 2.9e-219 EGP Major facilitator Superfamily
GAPBOOJH_02742 1e-187 K Helix-turn-helix XRE-family like proteins
GAPBOOJH_02743 2.3e-148 K Helix-turn-helix XRE-family like proteins
GAPBOOJH_02744 9.6e-158 K sequence-specific DNA binding
GAPBOOJH_02749 0.0 ybfG M peptidoglycan-binding domain-containing protein
GAPBOOJH_02750 4e-287 glnP P ABC transporter permease
GAPBOOJH_02751 2.4e-133 glnQ E ABC transporter, ATP-binding protein
GAPBOOJH_02752 1.7e-39
GAPBOOJH_02753 2e-236 malE G Bacterial extracellular solute-binding protein
GAPBOOJH_02754 9.1e-16
GAPBOOJH_02755 4.8e-131 S Protein of unknown function (DUF975)
GAPBOOJH_02756 1.5e-58 yqkB S Iron-sulphur cluster biosynthesis
GAPBOOJH_02757 1.2e-52
GAPBOOJH_02758 1.9e-80 S Bacterial PH domain
GAPBOOJH_02759 1.4e-284 ydbT S Bacterial PH domain
GAPBOOJH_02760 3.8e-142 S AAA ATPase domain
GAPBOOJH_02761 4.3e-166 yniA G Phosphotransferase enzyme family
GAPBOOJH_02762 2.6e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GAPBOOJH_02763 2.1e-255 glnP P ABC transporter
GAPBOOJH_02764 3.3e-264 glnP P ABC transporter
GAPBOOJH_02765 8.3e-99 ydaF J Acetyltransferase (GNAT) domain
GAPBOOJH_02766 9.7e-104 S Stage II sporulation protein M
GAPBOOJH_02767 1.9e-167 yeaC S ATPase family associated with various cellular activities (AAA)
GAPBOOJH_02768 7.1e-133 yeaD S Protein of unknown function DUF58
GAPBOOJH_02769 0.0 yebA E Transglutaminase/protease-like homologues
GAPBOOJH_02770 7e-214 lsgC M Glycosyl transferases group 1
GAPBOOJH_02771 4.6e-255 aspA 4.2.1.2, 4.3.1.1 E Fumarase C C-terminus
GAPBOOJH_02772 1.1e-192 L Transposase and inactivated derivatives, IS30 family
GAPBOOJH_02775 6.3e-197 mez_1 1.1.1.38 C Malic enzyme, NAD binding domain
GAPBOOJH_02776 2.9e-222 maeN C 2-hydroxycarboxylate transporter family
GAPBOOJH_02777 1.8e-268 dcuS 2.7.13.3 T Single cache domain 3
GAPBOOJH_02778 4.1e-119 dpiA KT cheY-homologous receiver domain
GAPBOOJH_02779 5.5e-95
GAPBOOJH_02780 3.7e-118 hprA 1.1.1.29 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GAPBOOJH_02782 1.8e-148 1.1.1.31 I NAD binding domain of 6-phosphogluconate dehydrogenase
GAPBOOJH_02783 1.4e-68
GAPBOOJH_02784 1.6e-131 yfeJ 6.3.5.2 F Glutamine amidotransferase class-I
GAPBOOJH_02785 5.8e-169 O protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GAPBOOJH_02787 8.8e-170 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GAPBOOJH_02788 1.5e-180 D Alpha beta
GAPBOOJH_02789 5.9e-185 lipA I Carboxylesterase family
GAPBOOJH_02790 3.5e-216 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
GAPBOOJH_02791 1e-78 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GAPBOOJH_02792 0.0 mtlR K Mga helix-turn-helix domain
GAPBOOJH_02793 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
GAPBOOJH_02794 2.8e-131 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GAPBOOJH_02795 3.3e-149 S haloacid dehalogenase-like hydrolase
GAPBOOJH_02796 2.8e-44
GAPBOOJH_02797 2e-14
GAPBOOJH_02798 4.1e-136
GAPBOOJH_02799 4.4e-222 spiA K IrrE N-terminal-like domain
GAPBOOJH_02800 5.6e-144 bacG M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GAPBOOJH_02801 2e-126 V ABC transporter
GAPBOOJH_02802 8.1e-208 bacI V MacB-like periplasmic core domain
GAPBOOJH_02803 1.1e-90 1.6.5.5 C nadph quinone reductase
GAPBOOJH_02804 3.6e-74 K Helix-turn-helix XRE-family like proteins
GAPBOOJH_02805 6.4e-30
GAPBOOJH_02806 1.1e-180
GAPBOOJH_02807 0.0 M Leucine rich repeats (6 copies)
GAPBOOJH_02808 2.1e-231 M Leucine rich repeats (6 copies)
GAPBOOJH_02809 6.7e-223 mtnE 2.6.1.83 E Aminotransferase
GAPBOOJH_02810 1.4e-139 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
GAPBOOJH_02811 2.7e-149 M NLPA lipoprotein
GAPBOOJH_02814 2.8e-60 K Psort location Cytoplasmic, score
GAPBOOJH_02815 3.4e-197 gldA 1.1.1.1, 1.1.1.6 C dehydrogenase
GAPBOOJH_02817 2e-222 amd 3.5.1.47 E Peptidase family M20/M25/M40
GAPBOOJH_02818 2.6e-80 S Threonine/Serine exporter, ThrE
GAPBOOJH_02819 3.2e-133 thrE S Putative threonine/serine exporter
GAPBOOJH_02821 7.2e-30
GAPBOOJH_02822 2.3e-274 V ABC transporter transmembrane region
GAPBOOJH_02823 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
GAPBOOJH_02824 3.6e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
GAPBOOJH_02825 1.3e-137 jag S R3H domain protein
GAPBOOJH_02826 6.4e-138 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GAPBOOJH_02827 1.9e-59 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
GAPBOOJH_02830 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)