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ORF_ID	e_value	Gene_name	EC_number	CAZy	COGs	Description
BIIOCMJE_00001	7.5e-252	yegQ			O	Peptidase U32
BIIOCMJE_00002	2.7e-86	bioY			S	biotin synthase
BIIOCMJE_00004	1.1e-33	XK27_12190			S	protein conserved in bacteria
BIIOCMJE_00005	9.6e-234	mntH			P	H( )-stimulated, divalent metal cation uptake system
BIIOCMJE_00006	6.7e-13
BIIOCMJE_00007	1.5e-15
BIIOCMJE_00008	1.4e-286	lysS	6.1.1.6		J	Belongs to the class-II aminoacyl-tRNA synthetase family
BIIOCMJE_00009	2e-143				M	LysM domain
BIIOCMJE_00010	1.8e-125	ybhF_2			V	abc transporter atp-binding protein
BIIOCMJE_00011	1.8e-177	ybhR			V	ABC transporter
BIIOCMJE_00012	1.5e-109				K	Bacterial regulatory proteins, tetR family
BIIOCMJE_00013	3.5e-140		2.4.2.3		F	Phosphorylase superfamily
BIIOCMJE_00014	6e-109	gph	3.1.3.18		S	HAD hydrolase, family IA, variant 1
BIIOCMJE_00015	0.0				V	Type III restriction enzyme, res subunit
BIIOCMJE_00016	4.1e-178	yclQ			P	ABC-type enterochelin transport system, periplasmic component
BIIOCMJE_00017	5.6e-53	coaB	4.1.1.36, 6.3.2.5		H	Phosphopantothenate-cysteine ligase
BIIOCMJE_00018	4.5e-89	coaBC	4.1.1.36, 6.3.2.5		H	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BIIOCMJE_00019	4.1e-93	panT			S	ECF transporter, substrate-specific component
BIIOCMJE_00020	0.0	pgm	5.4.2.2, 5.4.2.8		G	Phosphoglucomutase
BIIOCMJE_00021	7.3e-166	metF	1.5.1.20		E	reductase
BIIOCMJE_00022	0.0	metE	2.1.1.14		E	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BIIOCMJE_00024	2.3e-145	xerS			D	Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division
BIIOCMJE_00025	0.0	pepN	3.4.11.2		E	aminopeptidase
BIIOCMJE_00026	3.2e-113	phoU			P	Plays a role in the regulation of phosphate uptake
BIIOCMJE_00027	3e-139	pstB	3.6.3.27		P	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BIIOCMJE_00028	2e-149	pstB	3.6.3.27		P	Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BIIOCMJE_00029	9.1e-156	pstA			P	phosphate transport system permease
BIIOCMJE_00030	3.2e-156	pstC			P	probably responsible for the translocation of the substrate across the membrane
BIIOCMJE_00031	2.6e-155	pstS			P	phosphate
BIIOCMJE_00032	3.7e-167	acoA			C	Acetoin dehydrogenase E1 component subunit alpha
BIIOCMJE_00033	2.1e-172	pdhD	1.8.1.4		C	Dehydrogenase
BIIOCMJE_00034	2.9e-09				S	CsbD-like
BIIOCMJE_00035	5.5e-31				S	Membrane
BIIOCMJE_00036	8.9e-171				S	Domain of unknown function (DUF389)
BIIOCMJE_00037	2e-95	yegS	2.7.1.107		I	Diacylglycerol kinase
BIIOCMJE_00038	2.5e-121	ybbA			S	Putative esterase
BIIOCMJE_00039	2.7e-103	fatB			P	COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
BIIOCMJE_00040	1.2e-97	XK27_07830	2.3.1.128		J	Acetyltransferase GNAT Family
BIIOCMJE_00041	7.9e-230	murA	2.5.1.7		M	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BIIOCMJE_00042	0.0	comEC			S	Competence protein ComEC
BIIOCMJE_00043	1.4e-90	comEA			L	COG1555 DNA uptake protein and related DNA-binding proteins
BIIOCMJE_00044	1.1e-141	plsC	2.3.1.51		I	Acyltransferase
BIIOCMJE_00045	1.3e-147	nodB3			G	Polysaccharide deacetylase
BIIOCMJE_00046	3e-139	yabB	2.1.1.223		L	Methyltransferase
BIIOCMJE_00047	4.3e-40	yazA			L	endonuclease containing a URI domain
BIIOCMJE_00049	1e-08
BIIOCMJE_00051	0.0	parE	5.99.1.3		L	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
BIIOCMJE_00052	5.6e-107	plsY	2.3.1.15, 3.5.1.104		I	Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
BIIOCMJE_00053	1.1e-12				L	Helix-hairpin-helix DNA-binding motif class 1
BIIOCMJE_00054	2.2e-30				S	Domain of unknown function (DUF1912)
BIIOCMJE_00055	2.9e-168	mmuM	1.5.1.20, 2.1.1.10		H	Homocysteine
BIIOCMJE_00056	1.3e-249	mmuP			E	amino acid
BIIOCMJE_00057	3.9e-110	engB			D	Necessary for normal cell division and for the maintenance of normal septation
BIIOCMJE_00058	2.3e-31	clpX			O	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BIIOCMJE_00059	2e-217				EGP	Transmembrane secretion effector
BIIOCMJE_00060	4.3e-22
BIIOCMJE_00062	0.0	cadA	3.6.3.3, 3.6.3.5		P	COG2217 Cation transport ATPase
BIIOCMJE_00063	1.6e-61	smtB			K	Transcriptional regulator
BIIOCMJE_00064	2.4e-51	zupT			P	Mediates zinc uptake. May also transport other divalent cations
BIIOCMJE_00065	5.1e-78				P	Mediates zinc uptake. May also transport other divalent cations
BIIOCMJE_00066	6.1e-252	rumA	2.1.1.190		J	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BIIOCMJE_00067	1.4e-173	pta	2.3.1.8, 3.6.3.21		C	phosphate acetyltransferase
BIIOCMJE_00068	0.0	amiA			E	ABC transporter, substrate-binding protein, family 5
BIIOCMJE_00069	2.7e-311	amiA			E	ABC transporter, substrate-binding protein, family 5
BIIOCMJE_00070	9.3e-278	amiC			P	ABC transporter (Permease
BIIOCMJE_00071	7.8e-166	amiD			P	ABC transporter (Permease
BIIOCMJE_00072	7.9e-132	srtA	3.4.22.70		M	Sortase (surface protein transpeptidase)
BIIOCMJE_00073	0.0	gyrA	5.99.1.3		L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BIIOCMJE_00074	2.2e-179	ldh	1.1.1.27		C	Belongs to the LDH MDH superfamily. LDH family
BIIOCMJE_00075	3.9e-254	noxE			P	NADH oxidase
BIIOCMJE_00076	9.5e-294	yfmM			S	abc transporter atp-binding protein
BIIOCMJE_00077	7.4e-42	ytfP			S	Flavoprotein
BIIOCMJE_00078	4e-32				S	Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
BIIOCMJE_00080	9.9e-120	trmB	2.1.1.297, 2.1.1.33		J	Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
BIIOCMJE_00081	7.1e-152	ytmP	2.7.1.89		M	Phosphotransferase
BIIOCMJE_00082	1e-174	ecsB			U	Bacterial ABC transporter protein EcsB
BIIOCMJE_00083	3.7e-131	ecsA			V	abc transporter atp-binding protein
BIIOCMJE_00084	1e-72	hit			FG	Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
BIIOCMJE_00085	5.3e-07
BIIOCMJE_00088	1.6e-103
BIIOCMJE_00090	5.2e-09
BIIOCMJE_00091	0.0
BIIOCMJE_00092	0.0	bcsA	2.4.1.12	GT2	M	COG1215 Glycosyltransferases, probably involved in cell wall biogenesis
BIIOCMJE_00093	9.9e-149		2.4.1.83	GT2	M	COG0463, glycosyltransferases involved in cell wall biogenesis
BIIOCMJE_00094	6.6e-166				T	Diguanylate cyclase
BIIOCMJE_00095	1.1e-11	mnaA	5.1.3.14		G	Belongs to the UDP-N-acetylglucosamine 2-epimerase family
BIIOCMJE_00096	6.7e-26				L	Transposase
BIIOCMJE_00097	1e-176	vex1			V	Efflux ABC transporter, permease protein
BIIOCMJE_00098	1.3e-27	XK27_07020			S	Domain of unknown function (DUF1846)
BIIOCMJE_00099	2.2e-243	XK27_07020			S	Belongs to the UPF0371 family
BIIOCMJE_00101	4.3e-200	gldA	1.1.1.6		C	glycerol dehydrogenase
BIIOCMJE_00102	1.4e-181	XK27_10475			S	oxidoreductase
BIIOCMJE_00103	9.7e-59	dhaM	2.7.1.121		S	dihydroxyacetone kinase, phosphotransfer subunit
BIIOCMJE_00104	9e-96	dhaL	2.7.1.121		S	Dihydroxyacetone kinase
BIIOCMJE_00105	8.3e-48	dhaK	2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15		G	Dihydroxyacetone kinase
BIIOCMJE_00106	8.4e-128	deoD	2.4.2.1, 2.4.2.28		F	purine nucleoside phosphorylase
BIIOCMJE_00107	1.2e-129	yfeJ	6.3.5.2		F	glutamine amidotransferase
BIIOCMJE_00108	9e-120	clcA_2			P	chloride
BIIOCMJE_00109	9.2e-50				S	LemA family
BIIOCMJE_00110	1.7e-148	punA	2.4.2.1		F	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
BIIOCMJE_00111	8.8e-85				S	Protein of unknown function (DUF1697)
BIIOCMJE_00112	9.3e-197	deoB	5.4.2.7		G	Phosphotransfer between the C1 and C5 carbon atoms of pentose
BIIOCMJE_00113	4.7e-26
BIIOCMJE_00114	2.9e-273	sufB			O	assembly protein SufB
BIIOCMJE_00115	9.4e-74	nifU			C	SUF system FeS assembly protein, NifU family
BIIOCMJE_00116	1e-237	sufS	2.8.1.7, 4.4.1.16		E	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BIIOCMJE_00117	1.2e-233	sufD			O	assembly protein SufD
BIIOCMJE_00118	1.7e-137	sufC			O	ABC-type transport system involved in Fe-S cluster assembly, ATPase component
BIIOCMJE_00119	3.9e-183	tagO	2.7.8.33, 2.7.8.35		M	transferase
BIIOCMJE_00120	7.3e-53	mecA			NOT	Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
BIIOCMJE_00121	1.1e-173	yeaN			P	transporter
BIIOCMJE_00122	1.1e-74	XK27_04435	3.5.4.5		J	Acetyltransferase GNAT family
BIIOCMJE_00123	8.8e-139				S	hydrolases or acyltransferases (alpha beta hydrolase superfamily)
BIIOCMJE_00124	1.8e-164	aph	2.7.11.1		KLT	Aminoglycoside phosphotransferase
BIIOCMJE_00125	4.6e-82		3.4.13.21, 3.4.15.6		E	Belongs to the peptidase S51 family
BIIOCMJE_00126	2.8e-78	aacA7	2.3.1.82		K	Acetyltransferase (GNAT) family
BIIOCMJE_00127	1.5e-36	uvrX	2.7.7.7		L	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BIIOCMJE_00128	5e-54
BIIOCMJE_00129	8.7e-60
BIIOCMJE_00130	1.1e-49
BIIOCMJE_00131	6.9e-137	yheS_2			S	ATPase components of ABC transporters with duplicated ATPase domains
BIIOCMJE_00133	9e-154				S	CAAX amino terminal protease family protein
BIIOCMJE_00134	0.0	glnP			P	ABC-type amino acid transport signal transduction systems periplasmic component domain
BIIOCMJE_00135	8.7e-136	glnQ	3.6.3.21		E	abc transporter atp-binding protein
BIIOCMJE_00136	1.7e-17	XK27_00735
BIIOCMJE_00137	3.6e-213	obg			S	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BIIOCMJE_00138	1.3e-246	dacA1	3.4.16.4		M	Belongs to the peptidase S11 family
BIIOCMJE_00139	2.1e-211	yeaB			K	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BIIOCMJE_00140	1.2e-120	ung	3.2.2.27		L	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BIIOCMJE_00141	8.2e-235	pyrC	3.5.2.3		F	Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
BIIOCMJE_00142	1e-51	pabB	2.6.1.85, 4.1.3.27, 4.1.3.38		EH	component I
BIIOCMJE_00143	0.0		3.6.3.8		P	cation transport ATPase
BIIOCMJE_00144	8.5e-232	dltD			M	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BIIOCMJE_00145	2.2e-35	dltC	6.1.1.13		IQ	Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BIIOCMJE_00146	9.6e-236	dltB			M	Membrane protein involved in D-alanine export
BIIOCMJE_00147	1.8e-192	dltA	6.1.1.13		Q	Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BIIOCMJE_00148	0.0		2.4.1.5	GH13	M	KxYKxGKxW signal domain protein
BIIOCMJE_00150	3.2e-23				S	Protein of unknown function (DUF3278)
BIIOCMJE_00151	7e-77				D	Filamentation induced by cAMP protein fic
BIIOCMJE_00152	1.3e-37
BIIOCMJE_00153	4.8e-79	MA20_06410			E	LysE type translocator
BIIOCMJE_00154	1.4e-11				IQ	PFAM AMP-dependent synthetase and ligase
BIIOCMJE_00155	3.4e-49				K	regulation of RNA biosynthetic process
BIIOCMJE_00156	7e-47		3.2.2.21		S	YCII-related domain
BIIOCMJE_00157	1.3e-94				S	Psort location Cytoplasmic, score
BIIOCMJE_00158	5.8e-98		3.6.4.12		K	Psort location Cytoplasmic, score
BIIOCMJE_00159	7.1e-11	tnp*	1.1.1.193		L	An automated process has identified a potential problem with this gene model
BIIOCMJE_00160	1.3e-17				I	mechanosensitive ion channel activity
BIIOCMJE_00161	6e-234		2.4.1.5	GH13	M	KxYKxGKxW signal domain protein
BIIOCMJE_00162	0.0		3.5.1.28		M	domain protein
BIIOCMJE_00163	2.9e-108	livG			E	COG0411 ABC-type branched-chain amino acid transport systems, ATPase component
BIIOCMJE_00164	5.6e-124	livF			E	COG0410 ABC-type branched-chain amino acid transport systems, ATPase component
BIIOCMJE_00165	6.6e-111	acuB			S	CBS domain
BIIOCMJE_00166	1.1e-167	cysK	2.5.1.47		E	Belongs to the cysteine synthase cystathionine beta- synthase family
BIIOCMJE_00167	3.8e-108	yvyE	3.4.13.9		S	YigZ family
BIIOCMJE_00168	1.4e-237	comFA			L	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
BIIOCMJE_00169	1.3e-98	comFC			K	competence protein
BIIOCMJE_00170	1.6e-94	hpf			J	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BIIOCMJE_00171	3.8e-94	XK27_00500			L	SNF2 family N-terminal domain
BIIOCMJE_00173	0.0	salB			V	Lanthionine synthetase C-like protein
BIIOCMJE_00175	1.5e-07				S	Enterocin A Immunity
BIIOCMJE_00176	0.0	pepO	3.4.24.71		O	Peptidase family M13
BIIOCMJE_00177	7.1e-34				S	Immunity protein 41
BIIOCMJE_00178	3.5e-133				T	Ser Thr phosphatase family protein
BIIOCMJE_00179	5.5e-274				M	Putative cell wall binding repeat
BIIOCMJE_00180	0.0	pacL	3.6.3.8, 3.6.3.9		P	cation transport ATPase
BIIOCMJE_00181	3.3e-200	metB	2.5.1.48, 4.4.1.8		E	cystathionine
BIIOCMJE_00182	9.6e-222	malY	4.4.1.8		E	COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
BIIOCMJE_00183	2.1e-285		3.2.1.26, 3.2.1.65	GH32	G	Belongs to the glycosyl hydrolase 32 family
BIIOCMJE_00184	4.4e-18				V	abc transporter atp-binding protein
BIIOCMJE_00185	0.0				V	ABC transporter (Permease
BIIOCMJE_00186	8.9e-125				K	transcriptional regulator, MerR family
BIIOCMJE_00187	4.9e-105	dnaQ	2.7.7.7		L	DNA polymerase III
BIIOCMJE_00188	9.1e-42	WQ51_02910			S	Protein of unknown function, DUF536
BIIOCMJE_00189	9.6e-64	XK27_02560			S	cog cog2151
BIIOCMJE_00190	9.4e-98	ilvD	4.2.1.9		E	Belongs to the IlvD Edd family
BIIOCMJE_00191	2.3e-178	pyrD	1.3.1.14, 1.3.98.1		F	Catalyzes the conversion of dihydroorotate to orotate
BIIOCMJE_00193	6.3e-39	hup			L	Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
BIIOCMJE_00194	9.9e-95	ypmS			S	Protein conserved in bacteria
BIIOCMJE_00195	4.5e-155	ypmR			E	COG2755 Lysophospholipase L1 and related esterases
BIIOCMJE_00196	2e-144	DegV			S	DegV family
BIIOCMJE_00197	9.6e-300	recN			L	May be involved in recombinational repair of damaged DNA
BIIOCMJE_00198	1.3e-139	yqeM			Q	Methyltransferase domain protein
BIIOCMJE_00199	7.7e-58	rsfS			J	Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
BIIOCMJE_00200	3e-87	entB	3.5.1.19		Q	Isochorismatase family
BIIOCMJE_00201	2.2e-105	nadD	2.7.6.3, 2.7.7.18		H	HD superfamily hydrolase involved in NAD metabolism
BIIOCMJE_00202	1e-116	nadD	2.7.7.18, 3.6.1.55		H	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BIIOCMJE_00203	7.7e-49	yhbY			J	RNA-binding protein
BIIOCMJE_00204	7.8e-213	yqeH			S	in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
BIIOCMJE_00205	5.1e-98	yqeG			S	hydrolase of the HAD superfamily
BIIOCMJE_00206	2.4e-151	yicL			EG	COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
BIIOCMJE_00207	5.6e-141	yurR	1.4.5.1		E	oxidoreductase
BIIOCMJE_00208	1.9e-258				S	phospholipase Carboxylesterase
BIIOCMJE_00209	2.4e-161	rfbA	2.7.7.24		M	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
BIIOCMJE_00210	1.9e-112	rmlC	1.1.1.133, 5.1.3.13		M	Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
BIIOCMJE_00211	2.1e-204	rfbB	4.2.1.46		M	Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
BIIOCMJE_00213	7.2e-26	epuA			S	DNA-directed RNA polymerase subunit beta
BIIOCMJE_00214	5.5e-231	murA	2.5.1.7		M	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BIIOCMJE_00216	1.1e-194	galE	5.1.3.2		M	Belongs to the NAD(P)-dependent epimerase dehydratase family
BIIOCMJE_00217	3.2e-134				G	Domain of unknown function (DUF4832)
BIIOCMJE_00218	1.3e-82				S	membrane
BIIOCMJE_00219	2.3e-96				P	VTC domain
BIIOCMJE_00220	5.2e-12	cotH			M	CotH kinase protein
BIIOCMJE_00221	1.3e-200	hpk9	2.7.13.3		T	protein histidine kinase activity
BIIOCMJE_00222	2.5e-183	acoA	1.2.4.1, 1.2.4.4		C	Dehydrogenase E1 component
BIIOCMJE_00223	1.4e-181	acoB	1.2.4.1, 1.2.4.4		C	COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
BIIOCMJE_00224	1.8e-211	acoC	2.3.1.12		C	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
BIIOCMJE_00225	3.4e-161				K	sequence-specific DNA binding
BIIOCMJE_00226	5.9e-09
BIIOCMJE_00228	0.0		3.4.17.14, 3.5.1.28		M	GBS Bsp-like repeat
BIIOCMJE_00229	1.8e-133	agrA			KT	response regulator
BIIOCMJE_00230	3e-119		5.2.1.8		G	hydrolase
BIIOCMJE_00231	3e-113		1.14.14.5		C	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BIIOCMJE_00232	1.4e-201	MA20_36090			S	Protein of unknown function (DUF2974)
BIIOCMJE_00233	1.9e-133	sdh	1.1.1.276, 1.1.1.313, 1.1.1.381		S	Belongs to the short-chain dehydrogenases reductases (SDR) family
BIIOCMJE_00235	1.4e-229	fliF	2.1.1.72		N	bacterial-type flagellum-dependent cell motility
BIIOCMJE_00236	7.6e-58	sodA	1.15.1.1		C	radicals which are normally produced within the cells and which are toxic to biological systems
BIIOCMJE_00237	7.1e-163		3.5.2.6		V	D-alanyl-D-alanine carboxypeptidase
BIIOCMJE_00238	2.8e-101	pilD	3.4.23.43		NOU	Type II secretory pathway prepilin signal peptidase PulO and related peptidases
BIIOCMJE_00239	9e-79	dps			P	Belongs to the Dps family
BIIOCMJE_00240	3.4e-79	perR			P	Belongs to the Fur family
BIIOCMJE_00241	4.2e-27	yqgQ			S	protein conserved in bacteria
BIIOCMJE_00242	1.1e-175	glk	2.7.1.2		G	Glucokinase
BIIOCMJE_00245	4e-44
BIIOCMJE_00246	1.8e-96
BIIOCMJE_00247	2.4e-56				V	ABC-2 type transporter
BIIOCMJE_00248	7.5e-158				V	AAA domain, putative AbiEii toxin, Type IV TA system
BIIOCMJE_00250	2.8e-106				C	Iron-sulfur cluster-binding domain
BIIOCMJE_00252	3.9e-68				S	QueT transporter
BIIOCMJE_00253	1.7e-156	xth	3.1.11.2		L	exodeoxyribonuclease III
BIIOCMJE_00255	2.9e-17	yjdB			S	Domain of unknown function (DUF4767)
BIIOCMJE_00256	4.3e-166	tehB	2.1.1.265		PQ	tellurite resistance protein tehb
BIIOCMJE_00257	6.5e-168	corA			P	COG0598 Mg2 and Co2 transporters
BIIOCMJE_00258	8.5e-122	XK27_01040			S	Protein of unknown function (DUF1129)
BIIOCMJE_00260	1.7e-35	rpsR			J	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BIIOCMJE_00261	2.5e-81	ssb			L	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
BIIOCMJE_00262	1.1e-46	rpsF			J	Binds together with S18 to 16S ribosomal RNA
BIIOCMJE_00263	1.2e-41	XK27_05745
BIIOCMJE_00264	1.7e-114	phoH			T	phosphate starvation-inducible protein PhoH
BIIOCMJE_00270	1.6e-145	map	3.4.11.18		E	Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed
BIIOCMJE_00271	2.2e-160	rbn			E	Belongs to the UPF0761 family
BIIOCMJE_00272	2.8e-85	ccl			S	cog cog4708
BIIOCMJE_00273	0.0	ligA	6.5.1.2		L	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BIIOCMJE_00274	1.5e-183	yegS	2.7.1.107		I	Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
BIIOCMJE_00275	5.6e-181	norB			P	Major facilitator superfamily
BIIOCMJE_00276	7.8e-20				S	Domain of unknown function (DUF4767)
BIIOCMJE_00278	5.1e-108	cutC			P	Participates in the control of copper homeostasis
BIIOCMJE_00279	7.5e-128				S	CAAX amino terminal protease family
BIIOCMJE_00280	1.5e-95	ypgQ			F	HD superfamily hydrolase
BIIOCMJE_00281	6.9e-50	XK27_08140			K	Bacterial regulatory proteins, tetR family
BIIOCMJE_00282	2.1e-151	gst			O	Glutathione S-transferase
BIIOCMJE_00283	9.3e-175	nrnA	3.1.13.3, 3.1.3.7		S	domain protein
BIIOCMJE_00284	6.8e-170	apbE	2.7.1.180		H	Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
BIIOCMJE_00285	4.4e-45	rpmE2			J	50S ribosomal protein L31
BIIOCMJE_00286	5.7e-228	mntH			P	Mn2 and Fe2 transporters of the NRAMP family
BIIOCMJE_00287	3.9e-160	ypuA			S	secreted protein
BIIOCMJE_00288	4.4e-144	nnrD	4.2.1.136, 5.1.99.6		H	Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BIIOCMJE_00289	4.8e-154	folD	1.5.1.5, 3.5.4.9		F	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BIIOCMJE_00290	5.2e-147				I	Alpha/beta hydrolase family
BIIOCMJE_00291	5e-08
BIIOCMJE_00292	0.0	feoB			P	transporter of a GTP-driven Fe(2 ) uptake system
BIIOCMJE_00293	0.0	ftsI	3.4.16.4		M	penicillin-binding protein
BIIOCMJE_00294	2.4e-45	ftsL			D	cell division protein FtsL
BIIOCMJE_00295	5.7e-172	rsmH	2.1.1.199		J	Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
BIIOCMJE_00296	7.9e-90
BIIOCMJE_00300	6.7e-174				S	there are four paralogs in L.lactis
BIIOCMJE_00301	9.9e-283	recD2	3.1.11.5		L	DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
BIIOCMJE_00302	1.3e-46	azlD			S	branched-chain amino acid
BIIOCMJE_00303	4.8e-112	azlC			E	AzlC protein
BIIOCMJE_00304	8.2e-185	tsaD	2.3.1.234		O	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BIIOCMJE_00305	4.8e-73	rimI	2.3.1.128		K	This enzyme acetylates the N-terminal alanine of ribosomal protein S18
BIIOCMJE_00306	6.4e-117	yeaZ	2.3.1.234		O	COG1214, inactive homolog of metal-dependent proteases
BIIOCMJE_00307	1.5e-33	ykzG			S	Belongs to the UPF0356 family
BIIOCMJE_00308	6.2e-149				IQ	Belongs to the short-chain dehydrogenases reductases (SDR) family
BIIOCMJE_00309	9.2e-150				I	Alpha/beta hydrolase family
BIIOCMJE_00310	6.4e-180		1.1.1.1		C	nadph quinone reductase
BIIOCMJE_00311	1.1e-66				K	Transcriptional regulator
BIIOCMJE_00312	6.2e-58	pnuC			H	nicotinamide mononucleotide transporter
BIIOCMJE_00313	4.4e-149	cbiO2			P	Zeta toxin
BIIOCMJE_00314	5e-26
BIIOCMJE_00315	8.4e-22				S	calcium ion binding
BIIOCMJE_00316	2.6e-25
BIIOCMJE_00319	4.3e-07				K	BRO family, N-terminal domain
BIIOCMJE_00320	5.8e-65
BIIOCMJE_00321	6.5e-08
BIIOCMJE_00322	1.5e-07
BIIOCMJE_00323	1.6e-07				K	sequence-specific DNA binding
BIIOCMJE_00324	3.6e-50				S	protein disulfide oxidoreductase activity
BIIOCMJE_00325	1.5e-19				E	Zn peptidase
BIIOCMJE_00326	2.9e-114	pdp	2.4.2.2, 2.4.2.4		F	Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
BIIOCMJE_00327	1.6e-112	deoC	4.1.2.4, 5.4.2.8		F	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BIIOCMJE_00328	7.9e-67	cdd	2.4.2.2, 3.5.4.5		F	This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
BIIOCMJE_00329	1.8e-190	tcsA			S	membrane
BIIOCMJE_00330	1.7e-279	xylG	3.6.3.17		S	ABC transporter, ATP-binding protein
BIIOCMJE_00331	2.8e-111				M	Pilin isopeptide linkage domain protein
BIIOCMJE_00332	0.0				S	Uncharacterised protein conserved in bacteria (DUF2194)
BIIOCMJE_00333	2e-145
BIIOCMJE_00334	5.1e-275		5.1.3.2		GM	Psort location CytoplasmicMembrane, score
BIIOCMJE_00335	5.5e-231	lpdA	1.8.1.4		C	Dehydrogenase
BIIOCMJE_00337	0.0				S	dextransucrase activity
BIIOCMJE_00338	8.2e-137	tcyC2	3.6.3.21		E	abc transporter atp-binding protein
BIIOCMJE_00339	5.3e-111	yxeN			P	ABC transporter, permease protein
BIIOCMJE_00340	2e-26	ytmL			P	ABC transporter (Permease
BIIOCMJE_00341	0.0	recJ			L	Single-strand DNA-specific exonuclease, C terminal domain
BIIOCMJE_00342	9.9e-94	apt	2.4.2.22, 2.4.2.7		F	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BIIOCMJE_00343	2.7e-182	metA	2.3.1.46		E	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
BIIOCMJE_00344	1.3e-125	dnaD
BIIOCMJE_00345	2.1e-186	epsU			S	Polysaccharide biosynthesis protein
BIIOCMJE_00346	2.2e-215	glf	5.4.99.9		M	UDP-galactopyranose mutase
BIIOCMJE_00347	3.6e-185	sacB		GT2,GT4	M	Stealth protein CR2, conserved region 2
BIIOCMJE_00348	1e-185	wbbI			M	transferase activity, transferring glycosyl groups
BIIOCMJE_00350	5.6e-127	sitB	3.6.3.35		P	ABC transporter, ATP-binding protein
BIIOCMJE_00351	2.3e-132	mtsC			P	ABC-type Mn2 Zn2 transport systems, permease components
BIIOCMJE_00352	9.5e-172	sitA			P	Belongs to the bacterial solute-binding protein 9 family
BIIOCMJE_00353	1.4e-116	sirR			K	iron dependent repressor
BIIOCMJE_00354	4.9e-133	htpX			O	Belongs to the peptidase M48B family
BIIOCMJE_00355	1e-187	adhP	1.1.1.1		C	alcohol dehydrogenase
BIIOCMJE_00356	2e-59	rimL			J	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
BIIOCMJE_00357	1.5e-302	guaA	2.3.1.128, 6.3.5.2		F	Catalyzes the synthesis of GMP from XMP
BIIOCMJE_00358	2.2e-125	gntR1			K	transcriptional
BIIOCMJE_00359	5.5e-17				M	LysM domain
BIIOCMJE_00360	1.6e-120	cmk	1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1		F	Belongs to the cytidylate kinase family. Type 1 subfamily
BIIOCMJE_00361	1e-85	infC			J	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BIIOCMJE_00362	8.1e-28	rpmI			J	Belongs to the bacterial ribosomal protein bL35 family
BIIOCMJE_00363	1.5e-56	rplT			J	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BIIOCMJE_00364	5.5e-75	XK27_03610			K	Gnat family
BIIOCMJE_00365	8.1e-88	yybC
BIIOCMJE_00366	4.9e-27	dmpI	5.3.2.6		G	Belongs to the 4-oxalocrotonate tautomerase family
BIIOCMJE_00368	2.3e-139	modF	3.6.3.21, 3.6.3.34		P	abc transporter atp-binding protein
BIIOCMJE_00369	3.2e-237	hlyX			S	COG1253 Hemolysins and related proteins containing CBS domains
BIIOCMJE_00370	1.4e-08				MU	outer membrane autotransporter barrel domain protein
BIIOCMJE_00371	9e-311	sfcA	1.1.1.38, 4.1.1.101		C	Malic enzyme, NAD binding domain
BIIOCMJE_00372	1.9e-159	mleP			S	Sodium Bile acid symporter family
BIIOCMJE_00373	3.7e-73	mprF	2.3.2.3		S	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BIIOCMJE_00375	2.4e-233	dex	3.2.1.11	GH66	G	Glycosyl hydrolase family 66
BIIOCMJE_00376	5.6e-236	ilvA	4.3.1.19		E	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BIIOCMJE_00377	1.9e-112	def	3.5.1.31, 3.5.1.88		J	Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
BIIOCMJE_00378	1.8e-73	fnr5			K	Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
BIIOCMJE_00380	3.9e-114	papP			P	ABC transporter (Permease
BIIOCMJE_00381	3e-106				P	ABC transporter (Permease
BIIOCMJE_00382	2.2e-134	glnQ	3.6.3.21		E	abc transporter atp-binding protein
BIIOCMJE_00383	9.7e-155	cjaA			ET	ABC transporter substrate-binding protein
BIIOCMJE_00384	2.7e-65	mutF			V	AAA domain, putative AbiEii toxin, Type IV TA system
BIIOCMJE_00385	5.9e-52				V	ABC-2 family transporter protein
BIIOCMJE_00387	1e-145				S	TraX protein
BIIOCMJE_00388	3.9e-119				KT	Transcriptional regulatory protein, C terminal
BIIOCMJE_00389	4.4e-133	cbiQ			P	cobalt transport
BIIOCMJE_00390	1.4e-91		2.7.7.65		T	Psort location CytoplasmicMembrane, score
BIIOCMJE_00391	1.8e-134				S	Phenazine biosynthesis protein
BIIOCMJE_00392	4e-232	proWX			P	ABC transporter
BIIOCMJE_00393	5.1e-58	XK27_08085
BIIOCMJE_00394	5.2e-146	XK27_08080	3.1.1.53		G	Exopolysaccharide biosynthesis protein
BIIOCMJE_00395	7.4e-135	hisK	3.1.3.15		E	Histidinol phosphatase and related hydrolases of the PHP family
BIIOCMJE_00396	3.5e-117	ylfI			S	tigr01906
BIIOCMJE_00397	3e-139	nagD	2.7.1.25, 3.1.3.41		G	Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
BIIOCMJE_00398	1.7e-61	murM	2.3.2.10, 2.3.2.16		V	protein involved in methicillin resistance
BIIOCMJE_00399	4.6e-146	yidA			S	hydrolases of the HAD superfamily
BIIOCMJE_00400	1e-135	XK27_00115	2.3.1.128		K	Acetyltransferase GNAT family
BIIOCMJE_00401	1.2e-67	ywiB			S	Domain of unknown function (DUF1934)
BIIOCMJE_00402	7.6e-132	hisZ	2.4.2.17, 6.1.1.21		E	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
BIIOCMJE_00403	8e-117	hisG	2.4.2.17		E	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
BIIOCMJE_00404	4.6e-233	hisD	1.1.1.23, 1.1.1.308		E	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BIIOCMJE_00405	2.6e-106	hisB	1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19		E	imidazoleglycerol-phosphate dehydratase
BIIOCMJE_00406	2.6e-109	hisH			E	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BIIOCMJE_00407	3.6e-123	hisA	5.3.1.16		E	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
BIIOCMJE_00408	1.9e-30	cls			I	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BIIOCMJE_00409	2.4e-121	alkD			L	DNA alkylation repair enzyme
BIIOCMJE_00410	3.6e-199	asd	1.2.1.11		E	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BIIOCMJE_00411	6.6e-173	dapA	4.3.3.7		E	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BIIOCMJE_00412	7.1e-124	rnc	3.1.26.3		J	Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
BIIOCMJE_00414	9.2e-19				S	Ribosomal protein S1-like RNA-binding domain
BIIOCMJE_00416	1.5e-297				S	dextransucrase activity
BIIOCMJE_00417	4.1e-150	typA			T	GTP-binding protein TypA
BIIOCMJE_00419	9e-248	murD	6.3.2.9		M	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BIIOCMJE_00420	3.1e-198	murG	2.4.1.227	GT28	M	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BIIOCMJE_00421	2.8e-33	zmpB			M	M26 IgA1-specific Metallo-endopeptidase C-terminal region
BIIOCMJE_00422	9.3e-130	glnQ	3.6.3.21		E	abc transporter atp-binding protein
BIIOCMJE_00423	1.7e-117	WQ51_01820			P	Binding-protein-dependent transport system inner membrane component
BIIOCMJE_00424	1e-34	ykuJ			S	protein conserved in bacteria
BIIOCMJE_00425	5.9e-180	argF	2.1.3.3		E	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BIIOCMJE_00426	1.7e-44	niaR			S	small molecule binding protein (contains 3H domain)
BIIOCMJE_00427	1e-81				K	DNA-binding helix-turn-helix protein
BIIOCMJE_00428	5e-38				K	DNA-binding helix-turn-helix protein
BIIOCMJE_00429	2.7e-157	ylqF			S	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BIIOCMJE_00430	1e-134	rnhB	3.1.26.4		L	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BIIOCMJE_00431	1.1e-159				GK	ROK family
BIIOCMJE_00432	7.8e-10	sraP			UW	domain, Protein
BIIOCMJE_00433	4.6e-12
BIIOCMJE_00434	6.8e-153	yjjH			S	Calcineurin-like phosphoesterase
BIIOCMJE_00435	7e-133	nfrA	1.5.1.38, 1.5.1.39		C	nitroreductase
BIIOCMJE_00436	2.8e-263	pacL	3.6.3.8		P	cation transport ATPase
BIIOCMJE_00437	2.1e-76	asp3			S	Accessory Sec system protein Asp3
BIIOCMJE_00438	1.3e-290	asp2	3.4.11.5		S	Accessory Sec system protein Asp2
BIIOCMJE_00439	6.1e-288	asp1			S	Accessory Sec system protein Asp1
BIIOCMJE_00440	6.9e-81	secY2			U	Part of the accessory SecA2 SecY2 system specifically required for export of
BIIOCMJE_00441	2.2e-97	yocS			S	Transporter
BIIOCMJE_00444	7.9e-160	XK27_09825			V	abc transporter atp-binding protein
BIIOCMJE_00445	1.5e-132	yvfS			V	ABC-2 type transporter
BIIOCMJE_00446	9.4e-179	desK	2.7.13.3		T	Histidine kinase
BIIOCMJE_00447	3.1e-273	ftsK			D	Belongs to the FtsK SpoIIIE SftA family
BIIOCMJE_00448	0.0	pulA	3.2.1.41	CBM48,GH13	G	belongs to the glycosyl hydrolase 13 family
BIIOCMJE_00449	1.3e-34				S	the current gene model (or a revised gene model) may contain a frame shift
BIIOCMJE_00451	1.4e-15				S	HipA-like C-terminal domain
BIIOCMJE_00452	2.3e-170	ydhF			S	Aldo keto reductase
BIIOCMJE_00453	1.9e-06				S	Protein of unknown function (DUF3169)
BIIOCMJE_00454	5.5e-27	XK27_07105			K	transcriptional
BIIOCMJE_00455	5.5e-31
BIIOCMJE_00456	4.8e-108	XK27_02070			S	nitroreductase
BIIOCMJE_00457	7.4e-250	malF			P	ABC transporter (Permease
BIIOCMJE_00458	9.8e-152	malG			P	ABC transporter (Permease
BIIOCMJE_00459	1.4e-212	msmX			P	Belongs to the ABC transporter superfamily
BIIOCMJE_00460	9.5e-23	tatA			U	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
BIIOCMJE_00461	7.3e-145	XK27_08050			O	HflC and HflK could regulate a protease
BIIOCMJE_00462	1.8e-71	gloA	4.4.1.5		E	Lactoylglutathione lyase
BIIOCMJE_00463	3.6e-152				GK	ROK family
BIIOCMJE_00464	5.1e-209	serC	2.6.1.52		E	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BIIOCMJE_00466	1.7e-138				G	protein with an alpha beta hydrolase fold
BIIOCMJE_00467	6.8e-91	spxB	1.2.3.3, 1.2.5.1		EH	Belongs to the TPP enzyme family
BIIOCMJE_00468	3.5e-26	copA	3.6.3.54		P	P-type ATPase
BIIOCMJE_00469	5.5e-71	ndk	2.7.4.6		F	Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
BIIOCMJE_00470	6.3e-45	pspE			P	Rhodanese-like protein
BIIOCMJE_00471	3.1e-136				IQ	Acetoin reductase
BIIOCMJE_00473	4.6e-32	glyA	2.1.2.1		E	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BIIOCMJE_00474	1.2e-177	ndpA			S	37-kD nucleoid-associated bacterial protein
BIIOCMJE_00475	5.4e-99	pvaA			M	lytic transglycosylase activity
BIIOCMJE_00476	3.1e-293	yfiB1			V	abc transporter atp-binding protein
BIIOCMJE_00477	2.4e-153	hprK			F	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
BIIOCMJE_00478	8.4e-145	lgt	2.1.1.199		M	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BIIOCMJE_00479	3.7e-08	WQ51_05790			S	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
BIIOCMJE_00480	1.8e-67	ytxH			S	General stress protein
BIIOCMJE_00482	0.0	clpL			O	ATP-dependent Clp protease ATP-binding subunit
BIIOCMJE_00484	1e-43	yoeB			S	Addiction module toxin, Txe YoeB family
BIIOCMJE_00485	7.6e-39	yefM	2.3.1.15		D	Antitoxin component of a toxin-antitoxin (TA) module
BIIOCMJE_00486	6.6e-265	gapN	1.2.1.9		C	Belongs to the aldehyde dehydrogenase family
BIIOCMJE_00487	0.0	ptsI	2.7.3.9		G	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BIIOCMJE_00488	3.9e-38	ptsH			G	phosphocarrier protein Hpr
BIIOCMJE_00491	0.0	alsS	2.2.1.6		EH	Belongs to the TPP enzyme family
BIIOCMJE_00492	3e-133	budA	4.1.1.5		H	Belongs to the alpha-acetolactate decarboxylase family
BIIOCMJE_00493	3.5e-243	smc			D	Required for chromosome condensation and partitioning
BIIOCMJE_00494	5.3e-71	smc			D	Required for chromosome condensation and partitioning
BIIOCMJE_00495	1.9e-23				S	Protein of unknown function (DUF3278)
BIIOCMJE_00496	2.4e-47	prs	2.7.6.1		F	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BIIOCMJE_00497	3.5e-205	iscS	2.8.1.7		E	Cysteine desulfurase
BIIOCMJE_00498	8.2e-60	XK27_04120			S	Putative amino acid metabolism
BIIOCMJE_00499	6.2e-117	rex			K	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
BIIOCMJE_00500	1.7e-128	puuD			T	peptidase C26
BIIOCMJE_00501	1.2e-94	radC			E	Belongs to the UPF0758 family
BIIOCMJE_00502	1.4e-264		3.5.1.28		NU	GBS Bsp-like repeat
BIIOCMJE_00503	2.8e-37				L	COG3547 Transposase and inactivated derivatives
BIIOCMJE_00504	5e-177				S	dextransucrase activity
BIIOCMJE_00505	8.2e-227	thrE			K	Psort location CytoplasmicMembrane, score
BIIOCMJE_00506	1.4e-231	folC	6.3.2.12, 6.3.2.17		H	Belongs to the folylpolyglutamate synthase family
BIIOCMJE_00508	1.2e-208	iscS2	2.8.1.7		E	Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes
BIIOCMJE_00509	3.6e-14
BIIOCMJE_00511	7e-42	xisC			L	viral genome integration into host DNA
BIIOCMJE_00513	1.5e-225	radA			O	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BIIOCMJE_00514	9.6e-72		3.5.1.19		Q	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
BIIOCMJE_00515	1.6e-76	dut	3.6.1.23, 4.1.1.36, 6.3.2.5		F	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
BIIOCMJE_00516	6.3e-108	XK27_09620			S	FMN reductase (NADPH) activity
BIIOCMJE_00517	5.1e-108	XK27_09615			C	reductase
BIIOCMJE_00518	3.4e-89	vncS	2.7.13.3		T	Histidine kinase
BIIOCMJE_00519	2.9e-309	dexB	3.2.1.10, 3.2.1.70	GH13	G	COG0366 Glycosidases
BIIOCMJE_00520	2.6e-151	galR			K	Transcriptional regulator
BIIOCMJE_00522	7e-76
BIIOCMJE_00523	3.3e-167				M	Glycosyltransferase, group 2 family protein
BIIOCMJE_00524	6.8e-160				M	Glycosyltransferase like family 2
BIIOCMJE_00525	1.8e-87	ypuA			S	secreted protein
BIIOCMJE_00526	5.8e-305	FbpA			K	RNA-binding protein homologous to eukaryotic snRNP
BIIOCMJE_00527	2.6e-133				S	TraX protein
BIIOCMJE_00528	2.1e-71	malQ	2.4.1.25	GH77	G	4-alpha-glucanotransferase
BIIOCMJE_00529	0.0	glgP	2.4.1.1	GT35	G	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
BIIOCMJE_00530	8.1e-29
BIIOCMJE_00531	7.5e-152	nadK	2.7.1.23		H	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BIIOCMJE_00532	3.9e-119	yjbM	2.7.6.5		S	Gtp pyrophosphokinase
BIIOCMJE_00533	2.4e-101	yjbK			S	Adenylate cyclase
BIIOCMJE_00534	0.0	rgpF		GT2,GT4	M	Glycosyltransferase like family 2
BIIOCMJE_00535	1.2e-219				M	Psort location CytoplasmicMembrane, score
BIIOCMJE_00536	3.1e-161	pelF		GT4	M	Domain of unknown function (DUF3492)
BIIOCMJE_00537	2.9e-183	pelG			M	Putative exopolysaccharide Exporter (EPS-E)
BIIOCMJE_00538	3.6e-283	rgpF			M	Rhamnan synthesis protein F
BIIOCMJE_00539	2.8e-224	rgpD	3.6.3.38		P	Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
BIIOCMJE_00540	2e-118	rgpC			GM	Transport permease protein
BIIOCMJE_00541	1.6e-135	recX	2.4.1.337	GT4	S	Regulatory protein RecX
BIIOCMJE_00542	7.8e-102	ygaC			J	Belongs to the UPF0374 family
BIIOCMJE_00543	1.2e-103				S	Domain of unknown function (DUF1803)
BIIOCMJE_00544	1.2e-161	ppaC	3.6.1.1		C	inorganic pyrophosphatase
BIIOCMJE_00547	9.3e-118				S	Nucleotidyl transferase AbiEii toxin, Type IV TA system
BIIOCMJE_00548	3.4e-106	abiGI			K	Transcriptional regulator, AbiEi antitoxin
BIIOCMJE_00553	2.9e-105		3.4.17.14, 3.5.1.28		NU	amidase activity
BIIOCMJE_00554	3.5e-294	nptA			P	COG1283 Na phosphate symporter
BIIOCMJE_00555	4.3e-186	trxB1	1.18.1.2, 1.19.1.1		C	Ferredoxin--NADP reductase
BIIOCMJE_00556	7.2e-135	trmD	2.1.1.228, 4.6.1.12		J	Belongs to the RNA methyltransferase TrmD family
BIIOCMJE_00557	9.9e-94	rimM			J	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BIIOCMJE_00559	6.1e-93	XK27_05000			S	metal cluster binding
BIIOCMJE_00560	0.0				V	ABC transporter (permease)
BIIOCMJE_00561	1.7e-09				V	Glucan-binding protein C
BIIOCMJE_00562	1.5e-82	cdd	2.4.2.4, 3.5.4.5		F	cytidine deaminase activity
BIIOCMJE_00563	5.8e-132	yvfS			V	Transporter
BIIOCMJE_00564	1.2e-155	XK27_09825			V	abc transporter atp-binding protein
BIIOCMJE_00565	4.1e-15	liaI			KT	membrane
BIIOCMJE_00566	3.3e-95	lepB	3.4.21.89		U	Belongs to the peptidase S26 family
BIIOCMJE_00567	7.8e-222				G	COG0457 FOG TPR repeat
BIIOCMJE_00568	1.8e-56	yubA			S	permease
BIIOCMJE_00569	2.2e-41	pspC			KT	PspC domain
BIIOCMJE_00570	0.0	yhgF			K	Transcriptional accessory protein
BIIOCMJE_00571	6.4e-93	paiA	2.3.1.57		K	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
BIIOCMJE_00572	3.9e-198	pheS	6.1.1.20		J	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BIIOCMJE_00573	1.1e-22	WQ51_00220			K	Helix-turn-helix domain
BIIOCMJE_00574	9.2e-215	clpX			O	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BIIOCMJE_00575	9.7e-22
BIIOCMJE_00576	4.9e-90	folA	1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12		H	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BIIOCMJE_00577	2.7e-165	thyA	2.1.1.45		F	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BIIOCMJE_00578	1.7e-179	cpsE			M	Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
BIIOCMJE_00579	3.1e-220	rgpAc		GT4	M	group 1 family protein
BIIOCMJE_00580	2.2e-57				Q	the current gene model (or a revised gene model) may contain a frame shift
BIIOCMJE_00581	1.7e-18				S	Domain of unknown function (DUF4649)
BIIOCMJE_00582	1.1e-176	XK27_08835			S	ABC transporter substrate binding protein
BIIOCMJE_00583	2.6e-147	XK27_08840			S	Belongs to the binding-protein-dependent transport system permease family
BIIOCMJE_00584	3.5e-43	yaaK			S	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BIIOCMJE_00586	8.1e-131	acnA	4.2.1.3		C	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BIIOCMJE_00587	6.9e-209	citZ	2.3.3.1		C	Belongs to the citrate synthase family
BIIOCMJE_00588	2.9e-218	icd	1.1.1.42		C	Isocitrate dehydrogenase
BIIOCMJE_00589	6.2e-30				S	Domain of unknown function (DUF4300)
BIIOCMJE_00590	2e-119				V	CAAX protease self-immunity
BIIOCMJE_00591	1e-150	fecD			P	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BIIOCMJE_00592	1.1e-133	fecE	3.6.3.34		HP	ABC transporter
BIIOCMJE_00593	3.8e-254	murD	3.4.21.10, 6.3.2.13, 6.3.2.9		M	Mur ligase, middle domain protein
BIIOCMJE_00594	5.1e-148	dacA	2.7.7.85		S	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BIIOCMJE_00595	1.1e-100	pflA	1.97.1.4		C	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BIIOCMJE_00597	9e-75	XK27_03180			T	universal stress protein
BIIOCMJE_00598	5.2e-262	clpE			O	Belongs to the ClpA ClpB family
BIIOCMJE_00599	2.2e-84	mutT	3.5.4.33, 3.6.1.13, 3.6.1.55		L	Belongs to the Nudix hydrolase family
BIIOCMJE_00600	6.2e-48	XK27_09445			S	Domain of unknown function (DUF1827)
BIIOCMJE_00601	5.6e-141				S	oxidoreductase
BIIOCMJE_00602	1e-78				P	molecular chaperone
BIIOCMJE_00603	1.1e-92	XK27_05505			S	Psort location CytoplasmicMembrane, score
BIIOCMJE_00605	1.3e-48	hisE	3.5.4.19, 3.6.1.31, 5.3.1.16		E	phosphoribosyl-ATP diphosphatase activity
BIIOCMJE_00606	8e-60	hisI	3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16		E	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BIIOCMJE_00607	5.2e-176		4.1.1.37		H	Uroporphyrinogen decarboxylase (URO-D)
BIIOCMJE_00608	1.8e-164				ET	ABC transporter substrate-binding protein
BIIOCMJE_00609	0.0	nrdE	1.17.4.1		F	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BIIOCMJE_00610	6.5e-34	nrdH			O	Glutaredoxin
BIIOCMJE_00611	0.0		3.1.21.3		L	Subunit R is required for both nuclease and ATPase activities, but not for modification
BIIOCMJE_00612	1.4e-181	prfB			J	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BIIOCMJE_00613	3.2e-124	ftsE			D	cell division ATP-binding protein FtsE
BIIOCMJE_00614	4.7e-163	ftsX			D	Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
BIIOCMJE_00615	2.8e-57	WQ51_05710			S	Mitochondrial biogenesis AIM24
BIIOCMJE_00616	1e-87	cah	4.2.1.1		P	Reversible hydration of carbon dioxide
BIIOCMJE_00617	1.2e-50				S	Protein of unknown function (DUF3397)
BIIOCMJE_00618	3.7e-70	rplK			J	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BIIOCMJE_00619	5.3e-119	rplA			J	Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
BIIOCMJE_00620	8.9e-75	ywnA			K	Transcriptional regulator
BIIOCMJE_00621	2.8e-154				E	Alpha/beta hydrolase of unknown function (DUF915)
BIIOCMJE_00622	3.1e-131	pts13C			G	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BIIOCMJE_00623	5.6e-234	vicK	2.7.13.3		T	Histidine kinase
BIIOCMJE_00624	6.4e-128				KT	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
BIIOCMJE_00626	3.1e-113	vraR			K	Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
BIIOCMJE_00627	9.7e-170	vraS	2.7.13.3		T	Histidine kinase
BIIOCMJE_00628	1.9e-116	yvqF			S	Membrane
BIIOCMJE_00629	4.3e-170	yeiH			S	Membrane
BIIOCMJE_00631	2.6e-09
BIIOCMJE_00632	8.7e-56	adcA			P	Belongs to the bacterial solute-binding protein 9 family
BIIOCMJE_00633	1.9e-155	aatB			ET	ABC transporter substrate-binding protein
BIIOCMJE_00634	8.8e-207	uvrX	2.7.7.7		L	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BIIOCMJE_00635	3.7e-50
BIIOCMJE_00636	6.7e-44
BIIOCMJE_00637	5.5e-109	ung2	3.2.2.27		L	Uracil-DNA glycosylase
BIIOCMJE_00639	5.4e-59	arsC	1.20.4.1		P	Belongs to the ArsC family
BIIOCMJE_00640	3.5e-72	ogt	2.1.1.63, 3.2.2.20		L	methylated-DNA-[protein]-cysteine S-methyltransferase activity
BIIOCMJE_00641	7.7e-219	serA	1.1.1.399, 1.1.1.95		EH	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BIIOCMJE_00642	6.6e-65	wecD			M	Acetyltransferase (GNAT) domain
BIIOCMJE_00643	1.5e-278				S	unusual protein kinase
BIIOCMJE_00644	4.1e-38				S	granule-associated protein
BIIOCMJE_00645	8.2e-57	bglH	3.2.1.86	GT1	G	Belongs to the glycosyl hydrolase 1 family
BIIOCMJE_00646	1.5e-83				M	Pilin isopeptide linkage domain protein
BIIOCMJE_00647	6e-156	malR			K	Transcriptional regulator
BIIOCMJE_00648	0.0	parC	5.99.1.3		L	Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
BIIOCMJE_00649	3.4e-85	ilvE	2.6.1.42		E	Aminotransferase
BIIOCMJE_00651	3.3e-115	pgm6	5.4.2.11, 5.4.2.12		G	Phosphoglycerate mutase
BIIOCMJE_00652	6.7e-81	ybaK			S	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BIIOCMJE_00653	9.4e-140	XK27_00880	3.5.1.28		M	Glycosyl hydrolase, family 25
BIIOCMJE_00654	2.4e-49				L	COG1943 Transposase and inactivated derivatives
BIIOCMJE_00655	5e-33
BIIOCMJE_00658	5.8e-88	nth	4.2.99.18		L	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BIIOCMJE_00660	4.8e-76				S	Domain of Unknown Function with PDB structure (DUF3862)
BIIOCMJE_00661	2.4e-116				M	Pfam SNARE associated Golgi protein
BIIOCMJE_00662	5.2e-226	murN	2.3.2.16		V	FemAB family
BIIOCMJE_00663	2.4e-09				S	oxidoreductase
BIIOCMJE_00664	1.4e-235	vex3			V	Efflux ABC transporter, permease protein
BIIOCMJE_00665	1.5e-115				K	Response regulator receiver domain protein
BIIOCMJE_00666	1.1e-29				KT	response to antibiotic
BIIOCMJE_00667	1.9e-214	hemN			H	Involved in the biosynthesis of porphyrin-containing compound
BIIOCMJE_00668	2.4e-118	fat	3.1.2.21		I	Acyl-ACP thioesterase
BIIOCMJE_00669	5.4e-225	rgpA		GT4	M	Domain of unknown function (DUF1972)
BIIOCMJE_00670	1.1e-178			GT4	M	transferase activity, transferring glycosyl groups
BIIOCMJE_00671	1.1e-75	degV			S	DegV family
BIIOCMJE_00673	5.1e-22				K	Transcriptional
BIIOCMJE_00674	2e-79	rplM			J	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BIIOCMJE_00675	1.2e-64	rpsI			J	Belongs to the universal ribosomal protein uS9 family
BIIOCMJE_00678	2e-203	valS	6.1.1.9		J	amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
BIIOCMJE_00679	1.2e-31
BIIOCMJE_00680	2.7e-42				S	Protein of unknown function (DUF4065)
BIIOCMJE_00681	1.5e-153	czcD			P	cation diffusion facilitator family transporter
BIIOCMJE_00682	3e-93				K	Transcriptional regulator, TetR family
BIIOCMJE_00683	3.6e-58				S	Protein of unknown function with HXXEE motif
BIIOCMJE_00684	1.3e-122				V	abc transporter atp-binding protein
BIIOCMJE_00685	8e-205				P	FtsX-like permease family
BIIOCMJE_00686	1.1e-124	pyrF	4.1.1.23		F	Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
BIIOCMJE_00687	4.4e-112	pyrE	2.4.2.10, 4.1.1.23		F	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BIIOCMJE_00688	1.2e-106				G	Belongs to the phosphoglycerate mutase family
BIIOCMJE_00689	1.4e-107				G	Belongs to the phosphoglycerate mutase family
BIIOCMJE_00690	1.6e-108	pgm			G	Belongs to the phosphoglycerate mutase family
BIIOCMJE_00691	3.6e-83	supH	3.1.3.102, 3.1.3.104		S	Sucrose-6F-phosphate phosphohydrolase
BIIOCMJE_00692	1.9e-40	ylxM			S	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
BIIOCMJE_00693	1.7e-274	ffh	3.6.5.4		U	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BIIOCMJE_00694	5.3e-87
BIIOCMJE_00695	3.9e-211		2.7.13.3		T	protein histidine kinase activity
BIIOCMJE_00696	9.1e-34	agrA			KT	phosphorelay signal transduction system
BIIOCMJE_00697	2.3e-60	cls			I	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BIIOCMJE_00698	3.8e-90	pat	2.3.1.183		M	acetyltransferase
BIIOCMJE_00699	0.0	topA	5.99.1.2		L	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BIIOCMJE_00700	9e-29	dprA			LU	DNA protecting protein DprA
BIIOCMJE_00701	1.5e-20				S	dextransucrase activity
BIIOCMJE_00702	8.9e-128				S	ABC-2 family transporter protein
BIIOCMJE_00703	2.4e-167	bcrA			V	abc transporter atp-binding protein
BIIOCMJE_00704	0.0	gshF	6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.2.4		H	Belongs to the glutamate--cysteine ligase type 1 family
BIIOCMJE_00706	2.9e-143	peb1A			ET	Belongs to the bacterial solute-binding protein 3 family
BIIOCMJE_00707	3.6e-115	gltJ			P	ABC transporter (Permease
BIIOCMJE_00708	1.1e-110	tcyB_2			P	ABC transporter (permease)
BIIOCMJE_00709	9.1e-30	pdxS	4.3.3.6		H	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
BIIOCMJE_00710	6.7e-41	pdxT	4.3.3.6		H	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
BIIOCMJE_00711	6.8e-44	pdxT	4.3.3.6		H	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
BIIOCMJE_00712	1.6e-190				S	dextransucrase activity
BIIOCMJE_00713	2.4e-12				S	PcfK-like protein
BIIOCMJE_00714	6.3e-36	comGA			NU	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BIIOCMJE_00715	6.6e-17				L	Protein of unknown function (DUF3991)
BIIOCMJE_00716	9.8e-191	ppc	4.1.1.31		H	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
BIIOCMJE_00717	4.5e-183	holA	2.7.7.7		L	DNA polymerase III delta subunit
BIIOCMJE_00718	1.4e-31				S	Psort location CytoplasmicMembrane, score
BIIOCMJE_00719	8.1e-64				S	Domain of unknown function (DUF4430)
BIIOCMJE_00720	3.5e-112	glmS	2.6.1.16		M	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
BIIOCMJE_00721	6.6e-59	phnA			P	Alkylphosphonate utilization operon protein PhnA
BIIOCMJE_00722	3.1e-105	artQ			P	ABC transporter (Permease
BIIOCMJE_00723	2.5e-65	mur1	3.4.17.14, 3.5.1.28		NU	muramidase
BIIOCMJE_00724	8.4e-165	cpsY			K	Transcriptional regulator
BIIOCMJE_00725	0.0	pheT	6.1.1.20		J	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
BIIOCMJE_00726	2.2e-41		3.5.1.28		NU	amidase activity
BIIOCMJE_00728	2.5e-204	rpsA	1.17.7.4		J	ribosomal protein S1
BIIOCMJE_00731	3.7e-16				S	Protein of unknown function (DUF2969)
BIIOCMJE_00732	1.4e-43	ilvE	2.6.1.42		E	Aminotransferase
BIIOCMJE_00733	2.4e-90	trmK	2.1.1.217		S	SAM-dependent methyltransferase
BIIOCMJE_00734	6.6e-142	yqfO	3.5.4.16		S	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BIIOCMJE_00735	7.5e-144	zupT			P	Mediates zinc uptake. May also transport other divalent cations
BIIOCMJE_00736	3.6e-73	copY			K	negative regulation of transcription, DNA-templated
BIIOCMJE_00737	7.8e-71				S	CAAX protease self-immunity
BIIOCMJE_00738	1.4e-167				K	transcriptional regulator (lysR family)
BIIOCMJE_00739	1.4e-156	ispA	2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90		H	Belongs to the FPP GGPP synthase family
BIIOCMJE_00740	2.2e-148	rrmJ	2.1.1.226, 2.1.1.227		J	Ribosomal RNA large subunit methyltransferase J
BIIOCMJE_00741	6.5e-79	copA	3.6.3.54		P	P-type ATPase
BIIOCMJE_00742	2.7e-31	copZ	2.7.7.77		P	Heavy metal-associated domain protein
BIIOCMJE_00743	2.7e-191	ddl	6.3.2.4		F	Belongs to the D-alanine--D-alanine ligase family
BIIOCMJE_00744	9.2e-136	cnhA	3.5.1.3		S	Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
BIIOCMJE_00745	6.2e-96	vanY	3.4.17.14, 3.5.1.28		M	D-alanyl-D-alanine carboxypeptidase
BIIOCMJE_00746	7.1e-181	add	3.5.4.4		F	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
BIIOCMJE_00747	3e-110	tdk	2.7.1.21		F	thymidine kinase
BIIOCMJE_00748	1e-25	cps4A			K	Cell envelope-like function transcriptional attenuator common domain protein
BIIOCMJE_00749	3.4e-132	cpsB	3.1.3.48		GM	Capsular polysaccharide biosynthesis protein
BIIOCMJE_00750	1.2e-110	cps4C			M	biosynthesis protein
BIIOCMJE_00751	2.8e-64	copY			K	Copper transport repressor, CopY TcrY family
BIIOCMJE_00752	3.1e-65	silP	1.9.3.1, 3.6.3.54		S	cog cog4633
BIIOCMJE_00753	7.4e-159	copA	3.6.3.54		P	P-type ATPase
BIIOCMJE_00754	2e-45				S	dextransucrase activity
BIIOCMJE_00755	2.5e-33				K	Transcriptional regulatory protein, C terminal
BIIOCMJE_00756	8.4e-88				L	Transposase
BIIOCMJE_00757	8.1e-146				L	overlaps another CDS with the same product name
BIIOCMJE_00758	4.9e-63	msrR			K	Cell envelope-related transcriptional attenuator domain
BIIOCMJE_00759	1.1e-29				U	Large extracellular alpha-helical protein
BIIOCMJE_00760	2.2e-274				S	Psort location CytoplasmicMembrane, score
BIIOCMJE_00761	5.5e-109	celD			G	The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BIIOCMJE_00762	2.4e-60
BIIOCMJE_00763	1.7e-75	bdhA	1.1.1.303, 1.1.1.4		E	Dehydrogenase
BIIOCMJE_00764	1.5e-113				U	AAA-like domain
BIIOCMJE_00765	7.3e-231	XK27_10035			V	abc transporter atp-binding protein
BIIOCMJE_00766	1.1e-148				S	hmm pf01594
BIIOCMJE_00767	5.5e-63	rmaI			K	Transcriptional regulator, MarR family
BIIOCMJE_00768	3e-89	maa	2.3.1.79		GK	Maltose O-acetyltransferase
BIIOCMJE_00769	9.9e-21				S	N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity
BIIOCMJE_00770	8.4e-19				S	reductase
BIIOCMJE_00771	0.0	metG	6.1.1.10, 6.1.1.20		J	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BIIOCMJE_00772	3.1e-256	trmFO	2.1.1.74		J	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
BIIOCMJE_00773	3.1e-30	XK27_05470			E	Methionine synthase
BIIOCMJE_00774	8.6e-142				S	ABC-2 family transporter protein
BIIOCMJE_00775	3.6e-94	tetR			K	transcriptional regulator
BIIOCMJE_00776	2.6e-49				T	PhoQ Sensor
BIIOCMJE_00777	1e-29	rpsT			J	Binds directly to 16S ribosomal RNA
BIIOCMJE_00778	3.4e-169	coaA	2.7.1.33		F	Pantothenic acid kinase
BIIOCMJE_00779	8e-31	ribF	2.7.1.26, 2.7.7.2		H	Belongs to the ribF family
BIIOCMJE_00780	6e-58	spxA	1.20.4.1		K	Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
BIIOCMJE_00781	3.3e-43	yktA			S	Belongs to the UPF0223 family
BIIOCMJE_00782	2.7e-140	suhB	3.1.3.25		G	Belongs to the inositol monophosphatase superfamily
BIIOCMJE_00783	8.5e-40				L	Integrase core domain
BIIOCMJE_00784	9e-108				L	COG3547 Transposase and inactivated derivatives
BIIOCMJE_00785	1.6e-164				O	protein import
BIIOCMJE_00786	0.0	zmpB			M	signal peptide protein, YSIRK family
BIIOCMJE_00787	1.6e-52	pyrD	1.3.1.14, 1.3.98.1		F	Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
BIIOCMJE_00788	3.2e-75	cas1			L	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BIIOCMJE_00789	3.5e-67	cas1			L	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BIIOCMJE_00790	5.9e-52	cas2			L	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
BIIOCMJE_00792	9.7e-135	trmH	2.1.1.185		J	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BIIOCMJE_00793	1.3e-90	yacP			S	RNA-binding protein containing a PIN domain
BIIOCMJE_00794	1.2e-71	dnaX	2.7.7.7		L	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BIIOCMJE_00796	2.8e-171	birA	6.3.4.15		HK	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
BIIOCMJE_00797	7.8e-59	aspS	6.1.1.12		J	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
BIIOCMJE_00798	7.6e-30
BIIOCMJE_00799	2.4e-49				L	COG1943 Transposase and inactivated derivatives
BIIOCMJE_00800	3.2e-186				S	abc transporter atp-binding protein
BIIOCMJE_00802	3.5e-80	yecS			P	ABC transporter (Permease
BIIOCMJE_00803	3.1e-60	yckB			ET	Belongs to the bacterial solute-binding protein 3 family
BIIOCMJE_00804	4.4e-21	prmB	2.1.1.297, 2.1.1.298		J	Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
BIIOCMJE_00805	4.2e-104	ywlC	2.7.7.87, 3.1.3.48		J	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
BIIOCMJE_00806	9.2e-65	glyA	2.1.2.1		E	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BIIOCMJE_00807	6.6e-82		2.3.1.128		J	Acetyltransferase GNAT Family
BIIOCMJE_00808	3e-35				L	Transposase
BIIOCMJE_00809	1.9e-118	dnaI			L	Primosomal protein DnaI
BIIOCMJE_00810	5.2e-170	der	1.1.1.399, 1.1.1.95		S	GTPase that plays an essential role in the late steps of ribosome biogenesis
BIIOCMJE_00811	2.8e-210	XK27_08130			K	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
BIIOCMJE_00812	7e-56	nrdD_1	1.1.98.6, 1.17.4.1		F	Ribonucleoside-triphosphate reductase
BIIOCMJE_00813	2.1e-120				T	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
BIIOCMJE_00814	5.8e-242	mnmE			S	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BIIOCMJE_00815	4.2e-15
BIIOCMJE_00816	6.1e-33				I	mechanosensitive ion channel activity
BIIOCMJE_00817	5.3e-181	ybhK			S	Required for morphogenesis under gluconeogenic growth conditions
BIIOCMJE_00818	3e-37	rapZ			S	Displays ATPase and GTPase activities
BIIOCMJE_00819	2.3e-210	metK	2.5.1.6		H	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BIIOCMJE_00820	1e-184	lplA	6.3.1.20		H	Lipoate-protein ligase
BIIOCMJE_00821	1.6e-141	pdxK	2.7.1.35		H	Belongs to the pyridoxine kinase family
BIIOCMJE_00822	1.1e-44				S	ECF-type riboflavin transporter, S component
BIIOCMJE_00825	3.2e-150	rssA			S	Phospholipase, patatin family
BIIOCMJE_00826	3e-37		3.4.16.4		M	Belongs to the peptidase S11 family
BIIOCMJE_00827	5e-145	pyrK			C	Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
BIIOCMJE_00828	1.1e-147	manZ_1			G	PTS system mannose/fructose/sorbose family IID component
BIIOCMJE_00829	2.6e-127	XK27_08455			G	PTS system sorbose-specific iic component
BIIOCMJE_00830	2e-39	tyrA	1.3.1.12, 1.3.1.43		C	Prephenate dehydrogenase
BIIOCMJE_00831	2.3e-51	yheA			S	Control of competence regulator ComK, YlbF/YmcA
BIIOCMJE_00832	1.9e-158	galK	2.7.1.6		G	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
BIIOCMJE_00834	4.7e-95	hemH	4.99.1.1, 4.99.1.9		H	Catalyzes the ferrous insertion into protoporphyrin IX
BIIOCMJE_00835	1e-12				S	dextransucrase activity
BIIOCMJE_00836	4.3e-133	XK27_08075			M	glycosyl transferase family 2
BIIOCMJE_00837	7.6e-86				L	transposase activity
BIIOCMJE_00838	5.2e-150				L	Integrase core domain protein
BIIOCMJE_00839	2.4e-108				EGP	Major facilitator Superfamily
BIIOCMJE_00840	9.7e-211	ackA	2.7.2.1		H	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BIIOCMJE_00841	1.4e-204	ytoI			K	transcriptional regulator containing CBS domains
BIIOCMJE_00842	8.5e-57	rsmC	2.1.1.172		J	Methyltransferase
BIIOCMJE_00843	7e-63
BIIOCMJE_00844	1.6e-140	glnQ	3.6.3.21		E	abc transporter atp-binding protein
BIIOCMJE_00846	5.7e-50	bta	1.8.1.8		CO	cell redox homeostasis
BIIOCMJE_00847	2.4e-58				L	thioesterase
BIIOCMJE_00848	2.9e-151	yitS			S	EDD domain protein, DegV family
BIIOCMJE_00850	1.5e-40	opuD			M	Belongs to the BCCT transporter (TC 2.A.15) family
BIIOCMJE_00851	3.4e-36				P	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BIIOCMJE_00852	4.6e-45				L	RePlication protein
BIIOCMJE_00853	1.1e-80	cysS	6.1.1.16, 6.3.1.13		J	Belongs to the class-I aminoacyl-tRNA synthetase family
BIIOCMJE_00854	6.2e-58	yaaA			S	S4 domain protein YaaA
BIIOCMJE_00855	7.7e-132	plsC	2.3.1.51		M	Phosphate acyltransferases
BIIOCMJE_00856	4.6e-14	htaA	3.4.21.72		Q	the current gene model (or a revised gene model) may contain a frame shift
BIIOCMJE_00857	7.8e-28				L	transposase activity
BIIOCMJE_00858	1.6e-22				L	Transposase
BIIOCMJE_00859	2.7e-28				L	transposition
BIIOCMJE_00860	6e-163				L	Transposase
BIIOCMJE_00861	2.3e-119				S	hydrolase
BIIOCMJE_00862	1.1e-67	ywbL			P	COG0672 High-affinity Fe2 Pb2 permease
BIIOCMJE_00863	7.9e-70	rnz	3.1.26.11		S	Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
BIIOCMJE_00864	5.3e-136	XK27_05435	1.1.1.100		S	Belongs to the short-chain dehydrogenases reductases (SDR) family
BIIOCMJE_00865	2e-45	pulA	3.2.1.1, 3.2.1.41	CBM48,GH13	G	belongs to the glycosyl hydrolase 13 family
BIIOCMJE_00866	1.5e-89	prfA			J	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BIIOCMJE_00867	2.3e-142	rmuC			S	RmuC domain protein
BIIOCMJE_00868	8e-85	cah	4.2.1.1		P	Reversible hydration of carbon dioxide
BIIOCMJE_00869	1.4e-23	radA			L	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BIIOCMJE_00870	9.6e-86	ebsA			S	Family of unknown function (DUF5322)
BIIOCMJE_00871	1.8e-90	pepT	3.4.11.4		E	Cleaves the N-terminal amino acid of tripeptides
BIIOCMJE_00872	1.8e-101	pepP	3.4.11.9, 3.4.13.9		E	Belongs to the peptidase M24B family
BIIOCMJE_00873	7.8e-104	nylA	3.5.1.4		J	Belongs to the amidase family
BIIOCMJE_00874	1.7e-180				S	membrane
BIIOCMJE_00875	2.5e-67				S	Glutathione-dependent formaldehyde-activating
BIIOCMJE_00876	3.7e-176	glyQ	6.1.1.14		J	glycyl-tRNA synthetase alpha subunit
BIIOCMJE_00877	0.0	glyS	6.1.1.14		J	Glycyl-tRNA synthetase beta subunit
BIIOCMJE_00878	1.7e-38	ynzC			S	UPF0291 protein
BIIOCMJE_00879	2.4e-251	cycA			E	permease
BIIOCMJE_00880	2.2e-10	uvrX	2.7.7.7		L	impB/mucB/samB family
BIIOCMJE_00881	0.0	pts33BCA	2.7.1.201, 2.7.1.208, 2.7.1.211		G	pts system
BIIOCMJE_00882	3.9e-139	ppiA	5.2.1.8		O	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BIIOCMJE_00885	3.1e-56
BIIOCMJE_00886	4.2e-53				S	Weak similarity to UniProt
BIIOCMJE_00887	1.3e-97
BIIOCMJE_00888	4.5e-97				S	Domain of unknown function (DUF1851)
BIIOCMJE_00889	1.6e-78				S	Domain of unknown function (DUF1851)
BIIOCMJE_00891	5.8e-69				K	Helix-turn-helix
BIIOCMJE_00892	3.3e-42
BIIOCMJE_00894	9e-167	fhuR			K	transcriptional regulator (lysR family)
BIIOCMJE_00895	2.8e-76	lspA	3.4.23.36		MU	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BIIOCMJE_00896	8.5e-162	rluD	5.4.99.23		J	Responsible for synthesis of pseudouridine from uracil
BIIOCMJE_00897	1.8e-87	pyrR	2.4.2.9		F	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
BIIOCMJE_00898	3.1e-221	pyrP			F	uracil Permease
BIIOCMJE_00899	1.3e-173	pyrB	2.1.3.2		F	Belongs to the ATCase OTCase family
BIIOCMJE_00900	7.9e-210	carA	6.3.5.5		F	carbamoyl-phosphate synthetase glutamine chain
BIIOCMJE_00901	0.0	carB	6.3.5.5		F	carbamoyl-phosphate synthetase ammonia chain
BIIOCMJE_00902	6.8e-128		2.1.1.223		S	Putative SAM-dependent methyltransferase
BIIOCMJE_00903	7.5e-180	acrA			M	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BIIOCMJE_00904	2.3e-122	macB			V	ABC transporter, ATP-binding protein
BIIOCMJE_00905	3.1e-119				V	permease protein
BIIOCMJE_00906	5.1e-82				V	permease protein
BIIOCMJE_00907	5.6e-78	rplJ			J	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BIIOCMJE_00908	2.1e-45	rplL			J	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
BIIOCMJE_00911	2.4e-24				M	extracellular polysaccharide biosynthetic process
BIIOCMJE_00912	6.8e-67				K	Psort location Cytoplasmic, score
BIIOCMJE_00913	2.2e-36
BIIOCMJE_00914	8.7e-109				V	ABC transporter
BIIOCMJE_00915	1.3e-91	sagI			S	ABC-2 type transporter
BIIOCMJE_00916	7.1e-50				V	ABC-type multidrug transport system ATPase component
BIIOCMJE_00917	6.4e-19
BIIOCMJE_00919	4.4e-106	abiGI			K	Transcriptional regulator, AbiEi antitoxin
BIIOCMJE_00920	1.6e-272	opuD			M	Belongs to the BCCT transporter (TC 2.A.15) family
BIIOCMJE_00921	0.0	mdlB			V	abc transporter atp-binding protein
BIIOCMJE_00922	0.0	lmrA			V	abc transporter atp-binding protein
BIIOCMJE_00923	2.5e-197	queA	2.4.99.17		J	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
BIIOCMJE_00924	3.4e-121	nagB	3.1.1.31, 3.5.99.6		G	Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
BIIOCMJE_00925	2e-196	yceA			S	Belongs to the UPF0176 family
BIIOCMJE_00926	1.6e-28	XK27_00085			K	Transcriptional
BIIOCMJE_00927	1.1e-20
BIIOCMJE_00928	9.1e-136	deoD_1	2.4.2.3		F	Phosphorylase superfamily
BIIOCMJE_00929	8.7e-114				S	VIT family
BIIOCMJE_00930	7.2e-127	rsuA	5.4.99.19, 5.4.99.22		J	Belongs to the pseudouridine synthase RsuA family
BIIOCMJE_00931	3.8e-215	hipO	3.5.1.47		E	COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
BIIOCMJE_00932	3e-196	ald	1.4.1.1		C	Belongs to the AlaDH PNT family
BIIOCMJE_00934	2.4e-131				E	Alpha beta hydrolase
BIIOCMJE_00935	7.5e-247	merA	1.16.1.1		C	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BIIOCMJE_00936	2.4e-101	GBS0088			J	protein conserved in bacteria
BIIOCMJE_00937	4.4e-134	mvk	1.1.1.88, 2.3.3.10, 2.7.1.36		I	mevalonate kinase
BIIOCMJE_00938	4.1e-170	mvaD	4.1.1.33		I	diphosphomevalonate decarboxylase
BIIOCMJE_00939	1.2e-164	mvaK2	2.7.1.36, 2.7.1.43, 2.7.4.2		I	phosphomevalonate kinase
BIIOCMJE_00942	8.1e-20	ytsP	1.8.4.14		T	GAF domain-containing protein
BIIOCMJE_00943	1.3e-139	zwf	1.1.1.363, 1.1.1.49		G	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BIIOCMJE_00944	7.7e-119	secY			U	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
BIIOCMJE_00945	8.4e-136	pepO	3.4.24.71		O	Peptidase family M13
BIIOCMJE_00946	3.3e-30	acpP			IQ	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BIIOCMJE_00947	1.7e-99	fabH	2.3.1.180		I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BIIOCMJE_00948	2.1e-16	XK27_04800			S	Sucrose-6F-phosphate phosphohydrolase
BIIOCMJE_00949	7e-76				S	Bacterial inner membrane protein
BIIOCMJE_00950	1.5e-120	Z012_10770			M	Domain of unknown function (DUF1919)
BIIOCMJE_00951	9.9e-169	leuA	2.3.3.13		E	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BIIOCMJE_00952	5.7e-123	pepD			E	Dipeptidase
BIIOCMJE_00954	2.1e-119	ytmP	2.7.1.89		M	Phosphotransferase enzyme family
BIIOCMJE_00955	2.3e-63	yqhY			S	Asp23 family, cell envelope-related function
BIIOCMJE_00956	3.5e-97	efp			J	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BIIOCMJE_00957	8.6e-49		2.7.1.201, 2.7.1.208, 2.7.1.211		G	pts system
BIIOCMJE_00958	3.1e-32		2.7.1.201, 2.7.1.208, 2.7.1.211		G	pts system
BIIOCMJE_00959	5.8e-50		2.7.1.201, 2.7.1.208, 2.7.1.211		G	pts system
BIIOCMJE_00960	1.4e-07		2.7.1.201, 2.7.1.208, 2.7.1.211		G	pts system
BIIOCMJE_00961	3e-217	metE	2.1.1.14		E	Methionine synthase
BIIOCMJE_00962	3.4e-25	rpmF			J	Belongs to the bacterial ribosomal protein bL32 family
BIIOCMJE_00963	6.7e-19	rpmG			J	Belongs to the bacterial ribosomal protein bL33 family
BIIOCMJE_00964	9.7e-07
BIIOCMJE_00967	1e-110	nudL			L	hydrolase
BIIOCMJE_00968	3.2e-50				K	transcriptional regulator, PadR family
BIIOCMJE_00969	8.3e-57	XK27_06920			S	Protein of unknown function (DUF1700)
BIIOCMJE_00970	3.2e-102				S	Putative adhesin
BIIOCMJE_00971	1.5e-157	XK27_06930			V	domain protein
BIIOCMJE_00972	2.1e-94	XK27_06935			K	transcriptional regulator
BIIOCMJE_00973	2.9e-52	ypaA			M	Membrane
BIIOCMJE_00974	1.1e-10
BIIOCMJE_00975	5.8e-109	rpsD			J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
BIIOCMJE_00976	1.8e-47	veg			S	Biofilm formation stimulator VEG
BIIOCMJE_00977	2.5e-245	dnaB	3.6.4.12		L	Participates in initiation and elongation during chromosome replication
BIIOCMJE_00978	2.2e-73	rplI			J	binds to the 23S rRNA
BIIOCMJE_00979	0.0	yybT			T	signaling protein consisting of a modified GGDEF domain and a DHH domain
BIIOCMJE_00980	0.0	gidA			D	NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
BIIOCMJE_00981	7.8e-98	yvbG			U	UPF0056 membrane protein
BIIOCMJE_00982	1.2e-218	mnmA	2.8.1.13		J	Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
BIIOCMJE_00983	2.3e-304				S	Bacterial membrane protein, YfhO
BIIOCMJE_00984	2.7e-62	isaA		GH23	M	Immunodominant staphylococcal antigen A
BIIOCMJE_00985	3.1e-72	lytE			M	LysM domain protein
BIIOCMJE_00986	3.3e-133	ecfT			P	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BIIOCMJE_00987	1.4e-150	ecfA2	3.6.3.55		P	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BIIOCMJE_00988	2.7e-149	ecfA1			P	ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BIIOCMJE_00989	9.1e-90	pgsA	2.7.8.41, 2.7.8.5		I	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BIIOCMJE_00990	5.6e-126				S	sequence-specific DNA binding
BIIOCMJE_00991	1.3e-232	ymfH			S	Peptidase M16
BIIOCMJE_00992	1.1e-228	ymfF			S	Peptidase M16
BIIOCMJE_00993	1.9e-57	yaaA			S	S4 domain protein YaaA
BIIOCMJE_00994	9.8e-200	recF			L	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BIIOCMJE_00995	5.2e-273	guaB	1.1.1.205		F	Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
BIIOCMJE_00996	1.2e-188	trpS	6.1.1.2		J	Tryptophanyl-tRNA synthetase
BIIOCMJE_00997	1.6e-152	yvjA			S	membrane
BIIOCMJE_00998	1.1e-305	ybiT			S	abc transporter atp-binding protein
BIIOCMJE_00999	0.0	XK27_10405			S	Bacterial membrane protein YfhO
BIIOCMJE_01003	2.2e-117	yoaK			S	Protein of unknown function (DUF1275)
BIIOCMJE_01004	6.8e-81	rlmH	2.1.1.177		J	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BIIOCMJE_01005	1.5e-201	htrA	3.4.21.107		O	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain'
BIIOCMJE_01006	3.2e-133	parB			K	Belongs to the ParB family
BIIOCMJE_01007	7.2e-253	dnaA			L	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BIIOCMJE_01008	2.1e-197	dnaN	2.7.7.7		L	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
BIIOCMJE_01009	3.2e-29	yyzM			S	Protein conserved in bacteria
BIIOCMJE_01010	1.1e-203	ychF			J	ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
BIIOCMJE_01011	1.5e-103	pth	3.1.1.29		J	The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
BIIOCMJE_01012	0.0	mfd			L	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BIIOCMJE_01013	6.3e-39	yabO			J	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
BIIOCMJE_01014	8.7e-60	divIC			D	Septum formation initiator
BIIOCMJE_01016	2.3e-232	XK27_09285	3.5.2.6		V	Beta-lactamase enzyme family
BIIOCMJE_01017	1e-229	tilS	2.4.2.8, 6.3.4.19		D	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
BIIOCMJE_01018	2e-97	hpt	2.4.2.8, 6.3.4.19		F	Belongs to the purine pyrimidine phosphoribosyltransferase family
BIIOCMJE_01019	0.0	ftsH			O	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BIIOCMJE_01020	2.4e-124	scrK	2.7.1.2, 2.7.1.4		GK	Fructokinase
BIIOCMJE_01021	9.6e-188	manA	5.3.1.8		G	mannose-6-phosphate isomerase
BIIOCMJE_01023	0.0	secA			U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
BIIOCMJE_01024	5.5e-197	aroF	2.5.1.54		E	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BIIOCMJE_01025	5.5e-197	aroF	2.5.1.54		E	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
BIIOCMJE_01026	3.4e-61	acpS	2.7.6.3, 2.7.8.7, 5.1.1.1		I	Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
BIIOCMJE_01027	4.1e-182	alr	5.1.1.1, 5.1.1.5		E	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BIIOCMJE_01028	0.0	recG	3.6.4.12		L	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BIIOCMJE_01032	2.4e-30	yozG			K	Transcriptional regulator
BIIOCMJE_01033	4.7e-280				V	ABC transporter transmembrane region
BIIOCMJE_01034	1.8e-156				K	Helix-turn-helix XRE-family like proteins
BIIOCMJE_01036	4.6e-177	ansA	3.5.1.1		EJ	COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
BIIOCMJE_01037	1.4e-259	XK27_03190			S	hydrolases of the HAD superfamily
BIIOCMJE_01038	1.3e-107	yebC			M	Membrane
BIIOCMJE_01039	2.2e-310				KT	response to antibiotic
BIIOCMJE_01040	1.8e-72	XK27_02470			K	LytTr DNA-binding domain
BIIOCMJE_01041	9.7e-121	liaI			S	membrane
BIIOCMJE_01042	5.4e-192	mccF			V	LD-carboxypeptidase
BIIOCMJE_01043	6.6e-298				O	MreB/Mbl protein
BIIOCMJE_01045	5.8e-146				V	Psort location CytoplasmicMembrane, score
BIIOCMJE_01048	8.9e-14
BIIOCMJE_01049	5.5e-226	dcuS	2.7.13.3		T	protein histidine kinase activity
BIIOCMJE_01050	8.1e-236		2.7.13.3		T	protein histidine kinase activity
BIIOCMJE_01051	0.0	rexB	3.1.21.3, 3.6.4.12		L	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
BIIOCMJE_01052	0.0	addA	3.6.4.12		L	ATP-dependent helicase nuclease subunit A
BIIOCMJE_01053	4e-125				S	Protein of unknown function (DUF554)
BIIOCMJE_01054	1.8e-133	ecsA_2			V	abc transporter atp-binding protein
BIIOCMJE_01055	3.2e-284	XK27_00765
BIIOCMJE_01056	2.6e-141	proB	2.7.2.11		E	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BIIOCMJE_01057	4.6e-222	proA	1.2.1.41		E	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BIIOCMJE_01058	3.2e-60	yhaI			J	Membrane
BIIOCMJE_01059	4.6e-33	yhaI			J	Protein of unknown function (DUF805)
BIIOCMJE_01060	3.4e-62	yhaI			J	Protein of unknown function (DUF805)
BIIOCMJE_01061	1.3e-45	yhaI			J	Protein of unknown function (DUF805)
BIIOCMJE_01063	0.0	aspS	6.1.1.12		J	Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
BIIOCMJE_01064	1.6e-166	XK27_01785			S	cog cog1284
BIIOCMJE_01065	2.7e-121	yaaA			S	Belongs to the UPF0246 family
BIIOCMJE_01066	2.2e-113	nrdG	1.97.1.4		O	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BIIOCMJE_01067	6e-80	XK27_10930			K	acetyltransferase
BIIOCMJE_01068	7.5e-14
BIIOCMJE_01069	0.0	nrdD	1.1.98.6		F	Ribonucleoside-triphosphate reductase
BIIOCMJE_01070	1.7e-288	ccs			S	the current gene model (or a revised gene model) may contain a frame shift
BIIOCMJE_01071	3.2e-44	yrzB			S	Belongs to the UPF0473 family
BIIOCMJE_01072	1.8e-69	yqgF			L	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BIIOCMJE_01073	6.3e-44	yrzL			S	Belongs to the UPF0297 family
BIIOCMJE_01074	8.4e-27	rpmB			J	Belongs to the bacterial ribosomal protein bL28 family
BIIOCMJE_01075	2.4e-234	rarA			L	ATPase related to the helicase subunit of the Holliday junction resolvase
BIIOCMJE_01077	5.5e-89	adk	2.7.4.3		F	topology modulation protein
BIIOCMJE_01078	2.7e-249	purA	6.3.4.4		F	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BIIOCMJE_01079	2.6e-79	ptpA	3.1.3.48		T	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BIIOCMJE_01080	2.8e-35	XK27_09805			S	MORN repeat protein
BIIOCMJE_01081	0.0	XK27_09800			I	Acyltransferase
BIIOCMJE_01082	1e-187	ruvB	3.6.4.12		L	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
BIIOCMJE_01083	2.9e-48	rpsJ			J	Involved in the binding of tRNA to the ribosomes
BIIOCMJE_01084	2.4e-110	rplC			J	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BIIOCMJE_01085	5.7e-104	rplD			J	Forms part of the polypeptide exit tunnel
BIIOCMJE_01086	2.4e-44	rplW			J	One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
BIIOCMJE_01087	6.8e-153	rplB			J	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BIIOCMJE_01088	8.3e-47	rpsS			J	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BIIOCMJE_01089	7.3e-53	rplV			J	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BIIOCMJE_01090	1.6e-117	rpsC			J	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BIIOCMJE_01091	1.1e-71	rplP			J	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BIIOCMJE_01092	3.5e-26	rpmC			J	Belongs to the universal ribosomal protein uL29 family
BIIOCMJE_01093	6e-39	rpsQ			J	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BIIOCMJE_01094	3.9e-60	rplN			J	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BIIOCMJE_01095	1.4e-47	rplX			J	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BIIOCMJE_01096	1.6e-94	rplE			J	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BIIOCMJE_01097	1.5e-28	rpsN			J	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BIIOCMJE_01098	1.2e-67	rpsH			J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BIIOCMJE_01099	6.6e-93	rplF			J	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BIIOCMJE_01100	1.9e-56	rplR			J	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BIIOCMJE_01101	1.3e-79	rpsE			J	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BIIOCMJE_01102	1.9e-23	rpmD			J	ribosomal protein l30
BIIOCMJE_01103	5.7e-58	rplO			J	binds to the 23S rRNA
BIIOCMJE_01104	1.8e-229	secY			U	The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
BIIOCMJE_01105	2.1e-114	adk	2.7.4.3		F	Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
BIIOCMJE_01106	2.7e-32	infA			J	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BIIOCMJE_01107	6e-15	rpmJ			J	Belongs to the bacterial ribosomal protein bL36 family
BIIOCMJE_01108	4e-57	rpsM			J	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BIIOCMJE_01109	1.9e-62	rpsK			J	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BIIOCMJE_01110	3.6e-171	rpoA	2.7.7.6		K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BIIOCMJE_01111	4.4e-62	rplQ			J	ribosomal protein l17
BIIOCMJE_01112	3e-248		6.3.2.2		H	gamma-glutamylcysteine synthetase
BIIOCMJE_01114	6.9e-164	fba	4.1.2.13, 4.1.2.29		G	aldolase
BIIOCMJE_01117	1.5e-104				L	recombinase activity
BIIOCMJE_01121	1.1e-19
BIIOCMJE_01124	0.0				S	COG0433 Predicted ATPase
BIIOCMJE_01125	2.3e-137				S	Replication-relaxation
BIIOCMJE_01127	1.4e-298				L	Recombinase
BIIOCMJE_01128	2.2e-62	XK27_09615			C	reductase
BIIOCMJE_01129	1.1e-139	fnt			P	Formate nitrite transporter
BIIOCMJE_01130	6.7e-96	XK27_08585			S	Psort location CytoplasmicMembrane, score
BIIOCMJE_01131	9.1e-184	gpsA	1.1.1.94		I	Glycerol-3-phosphate dehydrogenase
BIIOCMJE_01132	1.9e-169	galU	2.7.7.9		M	UTP-glucose-1-phosphate uridylyltransferase
BIIOCMJE_01133	1.8e-116	gluP	3.4.21.105		O	membrane protein (homolog of Drosophila rhomboid)
BIIOCMJE_01134	5.3e-95	ygfA	6.3.3.2		H	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BIIOCMJE_01135	9.7e-219	hipO	3.5.1.47		E	Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
BIIOCMJE_01136	1.5e-57	dapD	2.3.1.117, 2.3.1.89		E	Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
BIIOCMJE_01137	1.6e-129				S	HAD hydrolase, family IA, variant
BIIOCMJE_01138	2e-157	rrmA	2.1.1.187		Q	methyltransferase
BIIOCMJE_01142	5.1e-90	tadA	3.5.4.1, 3.5.4.33		FJ	Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
BIIOCMJE_01143	1.9e-65	ssb_2			L	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
BIIOCMJE_01144	5.1e-113	pheT	6.1.1.20		J	Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
BIIOCMJE_01145	1.5e-09				S	NTF2 fold immunity protein
BIIOCMJE_01146	7.9e-54	ytpP	2.7.1.180, 5.3.4.1		CO	Thioredoxin
BIIOCMJE_01147	2.7e-08	XK27_10305			S	Domain of unknown function (DUF4651)
BIIOCMJE_01148	3.1e-203	pepA	3.4.11.7		G	COG1363 Cellulase M and related proteins
BIIOCMJE_01149	5.2e-131	proC	1.5.1.2		E	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BIIOCMJE_01150	4e-100				S	CAAX amino terminal protease family protein
BIIOCMJE_01152	5.8e-107				V	CAAX protease self-immunity
BIIOCMJE_01153	1.5e-26	lanR			K	sequence-specific DNA binding
BIIOCMJE_01154	2.2e-221	ackA	2.7.2.1		F	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BIIOCMJE_01155	2.5e-175	ytxK	2.1.1.72		L	DNA methylase
BIIOCMJE_01156	1.2e-12	comGF			U	Putative Competence protein ComGF
BIIOCMJE_01157	1.3e-70	comGF			U	Competence protein ComGF
BIIOCMJE_01158	1.1e-15				NU	Type II secretory pathway pseudopilin
BIIOCMJE_01159	3.5e-68	cglD			NU	Competence protein
BIIOCMJE_01160	2.2e-43	comGC			U	Required for transformation and DNA binding
BIIOCMJE_01161	6.3e-143	comGA			NU	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BIIOCMJE_01162	4.2e-175	comGA			NU	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BIIOCMJE_01163	1.7e-68				S	cog cog4699
BIIOCMJE_01164	0.0	rpoC	2.7.7.6		K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BIIOCMJE_01165	0.0	rpoB	2.7.7.6		K	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BIIOCMJE_01166	0.0	pbp1B	2.4.1.129, 3.4.16.4	GT51	M	penicillin-binding protein
BIIOCMJE_01167	3.2e-107	thiI	2.8.1.4		H	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BIIOCMJE_01168	5.3e-289	gtf1	2.4.1.52	GT4	M	An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
BIIOCMJE_01169	4.1e-253	gtf2			M	A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
BIIOCMJE_01170	2.1e-83		2.3.1.128		K	acetyltransferase
BIIOCMJE_01171	4.5e-49	rplU			J	This protein binds to 23S rRNA in the presence of protein L20
BIIOCMJE_01172	1.5e-46	rpmA			J	Belongs to the bacterial ribosomal protein bL27 family
BIIOCMJE_01173	1.1e-132	ydaF_2			J	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BIIOCMJE_01174	5e-63	WQ51_03320			S	cog cog4835
BIIOCMJE_01175	1.8e-145	XK27_08360			S	EDD domain protein, DegV family
BIIOCMJE_01176	2.5e-138	dapB	1.17.1.8		E	Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
BIIOCMJE_01177	5.6e-217	cca	2.7.7.19, 2.7.7.72		J	Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
BIIOCMJE_01178	0.0	yfmR			S	abc transporter atp-binding protein
BIIOCMJE_01179	2.9e-26				U	response to pH
BIIOCMJE_01180	3.7e-129		3.6.1.13, 3.6.1.55		F	AdP-ribose pyrophosphatase
BIIOCMJE_01181	1.8e-209	nadD	2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55		H	adenylyltransferase
BIIOCMJE_01182	1.4e-256	gdhA	1.4.1.4		E	Belongs to the Glu Leu Phe Val dehydrogenases family
BIIOCMJE_01183	1.6e-270				S	Psort location CytoplasmicMembrane, score
BIIOCMJE_01184	8.7e-69	def_1	3.5.1.31, 3.5.1.88		J	Removes the formyl group from the N-terminal Met of newly synthesized proteins
BIIOCMJE_01185	1.7e-73				K	DNA-binding transcription factor activity
BIIOCMJE_01186	2.3e-310	lmrA1			V	abc transporter atp-binding protein
BIIOCMJE_01187	0.0	lmrA2			V	abc transporter atp-binding protein
BIIOCMJE_01188	5.9e-109				K	Acetyltransferase (GNAT) family
BIIOCMJE_01189	2.4e-110		2.7.6.5		S	Region found in RelA / SpoT proteins
BIIOCMJE_01190	1e-114				T	response regulator
BIIOCMJE_01191	6.8e-210	sptS	2.7.13.3		T	Histidine kinase
BIIOCMJE_01192	1.7e-131	pyrH	2.7.4.22		F	Catalyzes the reversible phosphorylation of UMP to UDP
BIIOCMJE_01193	1.7e-91	frr			J	Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
BIIOCMJE_01194	4.5e-160	cvfB			S	Protein conserved in bacteria
BIIOCMJE_01195	1.4e-33	yozE			S	Belongs to the UPF0346 family
BIIOCMJE_01196	4.8e-126	sip			M	LysM domain protein
BIIOCMJE_01197	9.4e-86	XK27_09675			K	histone acetyltransferase HPA2 and related acetyltransferases
BIIOCMJE_01198	8.9e-256	mpl	6.3.2.4, 6.3.2.45, 6.3.2.8		M	Belongs to the MurCDEF family
BIIOCMJE_01199	9.6e-23
BIIOCMJE_01200	0.0	snf	2.7.11.1		L	Superfamily II DNA RNA helicases, SNF2 family'
BIIOCMJE_01201	2.6e-275	mapZ			D	Early cell division protein that marks the future cell division site and supports proper FtsZ ring positioning
BIIOCMJE_01202	1.8e-223	rlmL	2.1.1.173, 2.1.1.264		L	Belongs to the methyltransferase superfamily
BIIOCMJE_01203	2.1e-36	gpsB			D	regulation of cell shape
BIIOCMJE_01204	5.8e-94	ypsA			S	Belongs to the UPF0398 family
BIIOCMJE_01205	4.3e-109	recU			L	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
BIIOCMJE_01206	0.0	ponA	2.4.1.129, 3.4.16.4	GT51	M	penicillin-binding protein
BIIOCMJE_01207	2.1e-252	pepC	3.4.22.40		E	aminopeptidase
BIIOCMJE_01208	4.4e-74	yhaI			S	Protein of unknown function (DUF805)
BIIOCMJE_01209	2.6e-149	nadE	6.3.1.5		H	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
BIIOCMJE_01210	3.3e-272	pncB	6.3.4.21		H	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BIIOCMJE_01211	7.9e-217	macB_2			V	FtsX-like permease family
BIIOCMJE_01212	4.7e-120	yhcA			V	abc transporter atp-binding protein
BIIOCMJE_01213	1.8e-122	mta			K	Transcriptional
BIIOCMJE_01214	2.6e-31				S	Protein of unknown function (DUF3021)
BIIOCMJE_01215	2.6e-74				K	COG3279 Response regulator of the LytR AlgR family
BIIOCMJE_01216	5.1e-132	cylB			V	ABC-2 type transporter
BIIOCMJE_01217	7e-153	cylA			V	abc transporter atp-binding protein
BIIOCMJE_01218	1.5e-52				K	regulation of RNA biosynthetic process
BIIOCMJE_01219	1.5e-44		3.2.2.21		S	YCII-related domain
BIIOCMJE_01220	2.3e-24	yjdF			S	Protein of unknown function (DUF2992)
BIIOCMJE_01221	2.8e-232				S	COG1073 Hydrolases of the alpha beta superfamily
BIIOCMJE_01222	6.5e-73				K	transcriptional
BIIOCMJE_01223	2.4e-206	leuS	6.1.1.4		J	Belongs to the class-I aminoacyl-tRNA synthetase family
BIIOCMJE_01225	1.9e-07
BIIOCMJE_01230	0.0	polC	2.7.7.7		L	Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BIIOCMJE_01231	9.5e-236	pepS			E	COG2309 Leucyl aminopeptidase (aminopeptidase T)
BIIOCMJE_01232	1.2e-35	XK27_02060			S	Transglycosylase associated protein
BIIOCMJE_01233	1.5e-71	badR			K	Transcriptional regulator, marr family
BIIOCMJE_01234	1.4e-93				S	reductase
BIIOCMJE_01236	1.4e-284	ahpF			O	alkyl hydroperoxide reductase
BIIOCMJE_01237	4.2e-106	ahpC	1.11.1.15		O	alkyl hydroperoxide reductase
BIIOCMJE_01238	7.4e-138	rpsB			J	Belongs to the universal ribosomal protein uS2 family
BIIOCMJE_01239	1e-182	tsf			J	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BIIOCMJE_01240	1.6e-82				S	Putative small multi-drug export protein
BIIOCMJE_01241	2e-74	ctsR			K	Belongs to the CtsR family
BIIOCMJE_01242	0.0	clpC			O	Belongs to the ClpA ClpB family
BIIOCMJE_01243	1.8e-229	dacA	3.4.16.4		M	Belongs to the peptidase S11 family
BIIOCMJE_01244	2e-225	dacA	3.4.16.4		M	Belongs to the peptidase S11 family
BIIOCMJE_01245	0.0	pnp	2.7.7.8		J	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
BIIOCMJE_01246	5.5e-141				S	SseB protein N-terminal domain
BIIOCMJE_01247	2.5e-112	cysE	2.3.1.30		E	serine acetyltransferase
BIIOCMJE_01248	2.6e-255	cysS	6.1.1.16, 6.3.1.13		J	Belongs to the class-I aminoacyl-tRNA synthetase family
BIIOCMJE_01249	2.7e-67	mrnC			J	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
BIIOCMJE_01250	5.5e-239	tyrS	6.1.1.1		J	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BIIOCMJE_01251	1.3e-193	ilvC	1.1.1.86		H	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BIIOCMJE_01252	2.2e-76	ilvN	2.2.1.6		E	Acetolactate synthase
BIIOCMJE_01253	0.0	ilvB	2.2.1.6		EH	Acetolactate synthase
BIIOCMJE_01254	0.0	ilvD	4.2.1.9		E	Belongs to the IlvD Edd family
BIIOCMJE_01255	2.1e-302	yloV			S	kinase related to dihydroxyacetone kinase
BIIOCMJE_01256	1.4e-57	asp			S	cog cog1302
BIIOCMJE_01257	1.5e-223	norN			V	Mate efflux family protein
BIIOCMJE_01258	5.6e-275	thrC	4.2.3.1		E	Threonine synthase
BIIOCMJE_01261	0.0	adhE	1.1.1.1, 1.2.1.10		C	belongs to the iron- containing alcohol dehydrogenase family
BIIOCMJE_01262	0.0	pepO	3.4.24.71		O	Peptidase family M13
BIIOCMJE_01263	8.8e-256	treC	3.2.1.93	GH13	G	COG0366 Glycosidases
BIIOCMJE_01264	1.5e-95	ywlG			S	Belongs to the UPF0340 family
BIIOCMJE_01267	4.4e-166	lacX			G	Aldose 1-epimerase
BIIOCMJE_01268	2.1e-287	lacG	3.2.1.85		G	Belongs to the glycosyl hydrolase 1 family
BIIOCMJE_01269	3.4e-147	lacE	2.7.1.196, 2.7.1.205, 2.7.1.207		G	PTS system, lactose-specific
BIIOCMJE_01270	4.2e-68
BIIOCMJE_01271	7.8e-157				S	CHAP domain
BIIOCMJE_01272	2.3e-237	purD	6.3.4.13		F	Belongs to the GARS family
BIIOCMJE_01273	2.6e-80	purE	5.4.99.18		F	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BIIOCMJE_01274	1.5e-200	purK	6.3.4.18		F	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BIIOCMJE_01277	2.8e-246	purB	4.3.2.2		F	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BIIOCMJE_01278	0.0	argS	6.1.1.19		J	Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
BIIOCMJE_01279	3.4e-68	argR			K	Regulates arginine biosynthesis genes
BIIOCMJE_01280	1.2e-53	ymcA	3.6.3.21		S	Belongs to the UPF0342 family
BIIOCMJE_01281	0.0	mutS			L	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BIIOCMJE_01282	1.1e-77				S	Protein of unknown function (DUF3021)
BIIOCMJE_01283	3.5e-68				K	LytTr DNA-binding domain
BIIOCMJE_01285	0.0	mutL			L	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BIIOCMJE_01287	8.6e-102	ruvA	3.6.4.12		L	The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
BIIOCMJE_01288	1.1e-103	tag	3.2.2.20		L	3-methyladenine DNA glycosylase
BIIOCMJE_01289	3.6e-222	cinA	3.5.1.42		S	Belongs to the CinA family
BIIOCMJE_01290	1.2e-203	recA			L	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BIIOCMJE_01291	3.9e-66	spxA_2	1.20.4.1		P	Belongs to the ArsC family
BIIOCMJE_01292	9e-256	gor	1.8.1.7		C	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BIIOCMJE_01293	0.0	fruA	2.7.1.202		G	phosphotransferase system
BIIOCMJE_01294	1.7e-165	pfkB	2.7.1.11, 2.7.1.56		H	Belongs to the carbohydrate kinase PfkB family. LacC subfamily
BIIOCMJE_01295	9.1e-125	fruR			K	transcriptional
BIIOCMJE_01296	1.9e-207	rny			D	Endoribonuclease that initiates mRNA decay
BIIOCMJE_01297	4.7e-90	luxS	4.4.1.21		H	Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
BIIOCMJE_01298	5.1e-139	accA	2.1.3.15, 6.4.1.2		I	Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
BIIOCMJE_01299	2.3e-159	accD	2.1.3.15, 6.4.1.2		I	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BIIOCMJE_01300	1.8e-256	accC	6.3.4.14, 6.4.1.2		I	An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
BIIOCMJE_01301	1.5e-71	fabZ	3.5.1.108, 4.2.1.59		I	Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
BIIOCMJE_01302	2.5e-54	accB	2.3.1.12, 4.1.1.3		I	first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
BIIOCMJE_01303	5.7e-233	fabF	2.3.1.179		I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
BIIOCMJE_01304	6.2e-126				IQ	reductase
BIIOCMJE_01305	3.6e-163	fabD	2.3.1.39		I	Malonyl CoA-acyl carrier protein transacylase
BIIOCMJE_01306	6.8e-173	fabK	1.3.1.9		S	2-Nitropropane dioxygenase
BIIOCMJE_01307	3.3e-30	acpP			IQ	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BIIOCMJE_01308	1.3e-171	fabH	2.3.1.180		I	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BIIOCMJE_01309	5.2e-72	marR			K	Transcriptional regulator, MarR family
BIIOCMJE_01310	4.8e-140	phaB	5.3.3.14, 5.3.3.18		I	Belongs to the enoyl-CoA hydratase isomerase family
BIIOCMJE_01311	1.6e-117				S	HAD hydrolase, family IA, variant 3
BIIOCMJE_01312	5.3e-256	lysC	2.7.2.4		E	Belongs to the aspartokinase family
BIIOCMJE_01313	5.2e-192	asnA	6.3.1.1		E	aspartate--ammonia ligase
BIIOCMJE_01314	5.3e-181	rumA	2.1.1.190, 2.1.1.35		J	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BIIOCMJE_01315	3.9e-190	mvaS	2.3.3.10		I	synthase
BIIOCMJE_01316	4.5e-225	mvaA	1.1.1.34, 1.1.1.88, 2.3.1.9		C	Belongs to the HMG-CoA reductase family
BIIOCMJE_01317	1.1e-77				K	hmm pf08876
BIIOCMJE_01318	2.2e-117	yqfA			K	protein, Hemolysin III
BIIOCMJE_01319	6.7e-198				S	Protein of unknown function (DUF3114)
BIIOCMJE_01320	1.1e-156				S	hydrolases or acyltransferases (alpha beta hydrolase superfamily)
BIIOCMJE_01321	0.0	thrS	6.1.1.3		J	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BIIOCMJE_01323	5.7e-247	mgs	2.4.1.337	GT4	M	Glycosyltransferase, group 1 family protein
BIIOCMJE_01324	5.2e-192	dgs	2.4.1.208	GT4	M	Glycosyltransferase, group 1 family protein
BIIOCMJE_01325	0.0				U	protein secretion
BIIOCMJE_01326	7.7e-118	mtnN	3.2.2.9		E	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BIIOCMJE_01327	8.7e-22
BIIOCMJE_01328	1.2e-94	nudF	3.6.1.13		L	AdP-ribose pyrophosphatase
BIIOCMJE_01329	2.1e-244	glmU	2.3.1.157, 2.7.7.23		M	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BIIOCMJE_01330	0.0	mgtA	3.6.3.2		P	COG0474 Cation transport ATPase
BIIOCMJE_01331	7.4e-106	pflB	2.3.1.54		C	formate acetyltransferase'
BIIOCMJE_01332	1.6e-140	cah	4.2.1.1		P	carbonic anhydrase
BIIOCMJE_01333	1.1e-72	yjcF			S	COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
BIIOCMJE_01335	9.1e-170	ampC			V	COG1680 Beta-lactamase class C and other penicillin binding proteins
BIIOCMJE_01336	1.8e-136	cppA			E	CppA N-terminal
BIIOCMJE_01337	1.8e-94				V	CAAX protease self-immunity
BIIOCMJE_01338	4.7e-149	gla			U	Belongs to the MIP aquaporin (TC 1.A.8) family
BIIOCMJE_01339	0.0	pepX	3.4.14.11		E	Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
BIIOCMJE_01340	1.2e-43	spiA			K	sequence-specific DNA binding
BIIOCMJE_01349	0.0	mdlB			V	abc transporter atp-binding protein
BIIOCMJE_01350	0.0	mdlA			V	abc transporter atp-binding protein
BIIOCMJE_01353	9.7e-89	XK27_09885			V	Glycopeptide antibiotics resistance protein
BIIOCMJE_01354	1.8e-223	rlmN	2.1.1.192		J	Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
BIIOCMJE_01355	5.6e-63	yutD			J	protein conserved in bacteria
BIIOCMJE_01356	3.1e-259	yunD	3.1.3.5		F	Belongs to the 5'-nucleotidase family
BIIOCMJE_01357	1e-219	cshB	3.6.4.13		JKL	DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
BIIOCMJE_01358	7.3e-105				S	KAP family P-loop domain
BIIOCMJE_01359	0.0		2.4.1.5	GH13	M	KxYKxGKxW signal domain protein
BIIOCMJE_01361	1.7e-258				S	dextransucrase activity
BIIOCMJE_01362	0.0		2.4.1.5	GH13	M	KxYKxGKxW signal domain protein
BIIOCMJE_01364	1.3e-87				M	Putative cell wall binding repeat
BIIOCMJE_01365	1.1e-211				M	Putative cell wall binding repeat
BIIOCMJE_01366	2.6e-12				M	Putative cell wall binding repeat
BIIOCMJE_01367	3.2e-200	dcm	2.1.1.37		H	cytosine-specific methyltransferase
BIIOCMJE_01368	3.8e-290
BIIOCMJE_01369	2.4e-16	atpE			C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BIIOCMJE_01370	5.3e-114	atpB			C	it plays a direct role in the translocation of protons across the membrane
BIIOCMJE_01371	2.1e-77	atpF			C	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BIIOCMJE_01372	3.9e-85	atpH			C	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BIIOCMJE_01373	1e-279	atpA	3.6.3.14		C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BIIOCMJE_01374	4.8e-157	atpG			C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BIIOCMJE_01375	2.3e-262	atpD	3.6.3.14		C	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BIIOCMJE_01376	2.6e-68	atpC			C	Produces ATP from ADP in the presence of a proton gradient across the membrane
BIIOCMJE_01377	2.7e-217	ftsW			D	Belongs to the SEDS family
BIIOCMJE_01378	1.6e-224	tuf			J	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BIIOCMJE_01379	2.6e-135	tpiA	2.7.2.3, 5.3.1.1		G	Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
BIIOCMJE_01380	0.0	tkt	2.2.1.1		G	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BIIOCMJE_01382	1.3e-108	tmk	2.7.4.9		F	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BIIOCMJE_01383	1.7e-159	holB	2.7.7.7		L	dna polymerase iii
BIIOCMJE_01384	1.3e-132	yaaT			S	stage 0 sporulation protein
BIIOCMJE_01385	1.2e-54	yabA			L	Involved in initiation control of chromosome replication
BIIOCMJE_01386	3.3e-158	rsmI	2.1.1.198		H	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BIIOCMJE_01387	1.1e-25	amt			P	Ammonium Transporter
BIIOCMJE_01388	2.5e-102	mur1	3.4.17.14, 3.5.1.28		NU	amidase activity
BIIOCMJE_01389	7.9e-280	pbp2b	3.4.16.4		M	penicillin-binding protein
BIIOCMJE_01390	1.3e-105	recR			L	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BIIOCMJE_01391	6.4e-42	licT			K	antiterminator
BIIOCMJE_01392	2.6e-80	licT			K	antiterminator
BIIOCMJE_01393	1.3e-87	ybeY	2.6.99.2, 3.5.4.5		S	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BIIOCMJE_01394	2e-65	dgkA	2.7.1.107, 2.7.1.66		M	Diacylglycerol kinase
BIIOCMJE_01395	1.3e-165	era			M	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BIIOCMJE_01396	2.4e-150	fpg	3.2.2.23, 4.2.99.18		L	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
BIIOCMJE_01397	2.6e-98	coaE	2.7.1.24, 3.2.2.23, 4.2.99.18	GH23	H	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BIIOCMJE_01398	1.9e-220	mdtG			EGP	Major facilitator Superfamily
BIIOCMJE_01399	2e-33	secG			U	Preprotein translocase subunit SecG
BIIOCMJE_01400	0.0	rnr			J	3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
BIIOCMJE_01401	1.9e-80	smpB			O	the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
BIIOCMJE_01402	5.7e-277	ppiB	5.2.1.8		G	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BIIOCMJE_01403	1.3e-63	yugI	5.3.1.9		J	RNA binding protein, contains ribosomal protein S1 domain
BIIOCMJE_01404	2.4e-195	pepQ	3.4.13.9		E	Belongs to the peptidase M24B family
BIIOCMJE_01405	3.2e-181	ccpA			K	Catabolite control protein A
BIIOCMJE_01406	1e-198	yyaQ			S	YjbR
BIIOCMJE_01407	1.3e-191	glxK	2.7.1.165		G	Belongs to the glycerate kinase type-1 family
BIIOCMJE_01408	3.1e-75	yueI			S	Protein of unknown function (DUF1694)
BIIOCMJE_01409	2.8e-246	eno	4.2.1.11		G	Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
BIIOCMJE_01410	6.7e-93				S	UPF0397 protein
BIIOCMJE_01411	6e-157	salL	2.5.1.63, 2.5.1.94		S	S-adenosyl-l-methionine hydroxide adenosyltransferase
BIIOCMJE_01412	5.1e-210	sstT			E	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
BIIOCMJE_01413	1.2e-99	metI			P	ABC transporter (Permease
BIIOCMJE_01414	6e-186	metN			P	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BIIOCMJE_01415	2e-263	dapE	3.5.1.18		E	COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases
BIIOCMJE_01416	1.4e-164	metQ			M	Belongs to the NlpA lipoprotein family
BIIOCMJE_01417	6.3e-138				ET	ABC transporter substrate-binding protein
BIIOCMJE_01418	6.3e-131	cbiO			P	ABC transporter
BIIOCMJE_01419	3.2e-136				P	cobalt transport protein
BIIOCMJE_01420	1.3e-176	cbiM			P	biosynthesis protein CbiM
BIIOCMJE_01421	5.2e-161	ureD			O	Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
BIIOCMJE_01422	4.7e-111	ureG			KO	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
BIIOCMJE_01423	5.3e-130	ureF			O	Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
BIIOCMJE_01424	6.6e-78	ureE			O	enzyme active site formation
BIIOCMJE_01425	0.0	ureC	3.5.1.5		E	Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
BIIOCMJE_01426	7.8e-54	ureB	3.5.1.5		E	Belongs to the urease beta subunit family
BIIOCMJE_01427	7.6e-46	ureA	3.5.1.5		E	Belongs to the urease gamma subunit family
BIIOCMJE_01428	6.8e-95	ureI			S	AmiS/UreI family transporter
BIIOCMJE_01429	1.9e-245				S	Domain of unknown function (DUF4173)
BIIOCMJE_01430	3.2e-53	yhaI			L	Membrane
BIIOCMJE_01431	9.5e-150	comA			V	ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
BIIOCMJE_01432	0.0	proS	6.1.1.15		J	Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
BIIOCMJE_01433	1.4e-229	rseP	3.4.21.107, 3.4.21.116		M	zinc metalloprotease
BIIOCMJE_01434	1.3e-142	cdsA	2.7.7.41		S	Belongs to the CDS family
BIIOCMJE_01435	5.3e-141	uppS	2.5.1.31		H	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BIIOCMJE_01436	1.7e-46	yajC			U	protein transport
BIIOCMJE_01437	1e-125	yeeN			K	transcriptional regulatory protein
BIIOCMJE_01438	2.4e-268				V	ABC transporter
BIIOCMJE_01439	1.4e-148	Z012_04635			K	sequence-specific DNA binding
BIIOCMJE_01440	1.6e-257	pgi	5.3.1.9		G	Belongs to the GPI family
BIIOCMJE_01441	4e-158	rgfB	3.1.3.90		L	Endonuclease/Exonuclease/phosphatase family
BIIOCMJE_01442	0.0	ptsG	2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211		G	pts system
BIIOCMJE_01443	5.5e-159	mleP2			S	Transporter, auxin efflux carrier (AEC) family protein
BIIOCMJE_01444	9.6e-128	adcB			P	ABC transporter (Permease
BIIOCMJE_01445	7.1e-135	adcC			P	ABC transporter, ATP-binding protein
BIIOCMJE_01446	1e-70	adcR			K	transcriptional
BIIOCMJE_01447	2.8e-182	dus			J	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BIIOCMJE_01448	1.4e-104	hslO			O	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BIIOCMJE_01449	7.9e-106	lepB	3.4.21.89		U	Belongs to the peptidase S26 family
BIIOCMJE_01450	3.8e-154	rnhC	3.1.26.4		L	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BIIOCMJE_01451	1.4e-26	zapA			D	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
BIIOCMJE_01452	4.1e-90	cvpA			S	toxin biosynthetic process
BIIOCMJE_01453	0.0	mutS2			L	Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
BIIOCMJE_01454	6e-129				V	ABC transporter, ATP-binding protein
BIIOCMJE_01455	6.3e-229				V	ABC transporter (Permease
BIIOCMJE_01457	0.0				V	ABC transporter (Permease
BIIOCMJE_01458	1.2e-228		2.7.13.3		T	Histidine kinase
BIIOCMJE_01459	5.1e-94	salR			K	helix_turn_helix, Lux Regulon
BIIOCMJE_01460	0.0	polA	2.7.7.7		L	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BIIOCMJE_01462	5.2e-36
BIIOCMJE_01465	1.1e-222	mutY			L	A G-specific adenine glycosylase
BIIOCMJE_01466	2.2e-290	uvrB			L	damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
BIIOCMJE_01467	9.5e-80	mutT	3.6.1.55		F	Nudix family
BIIOCMJE_01468	2.5e-136				ET	ABC transporter
BIIOCMJE_01469	7.2e-136				ET	Belongs to the bacterial solute-binding protein 3 family
BIIOCMJE_01470	3.9e-196	arcT	2.6.1.1		E	Aminotransferase
BIIOCMJE_01471	7.9e-135	gltS			ET	Belongs to the bacterial solute-binding protein 3 family
BIIOCMJE_01472	3.2e-20	rpsU			J	Belongs to the bacterial ribosomal protein bS21 family
BIIOCMJE_01473	6.4e-50	mscL			M	Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
BIIOCMJE_01474	0.0	dnaG			L	RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
BIIOCMJE_01475	4e-201	sigA			K	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
BIIOCMJE_01476	3.4e-55	yitW			K	metal-sulfur cluster biosynthetic enzyme
BIIOCMJE_01477	2e-169	yfdH		GT2	M	COG0463, glycosyltransferases involved in cell wall biogenesis
BIIOCMJE_01478	5.7e-215				S	Predicted membrane protein (DUF2142)
BIIOCMJE_01479	8.4e-159	rfbD	1.1.1.133, 5.1.3.13		M	Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
BIIOCMJE_01480	6.5e-125	ycbB			S	Glycosyl transferase family 2
BIIOCMJE_01481	2.6e-47	XK27_09090			S	Uncharacterized conserved protein (DUF2304)
BIIOCMJE_01482	2e-106		2.4.1.60		S	Glycosyltransferase group 2 family protein
BIIOCMJE_01483	2.2e-192	amrA			S	membrane protein involved in the export of O-antigen and teichoic acid
BIIOCMJE_01484	1.9e-122				S	Glycosyltransferase like family 2
BIIOCMJE_01485	1.2e-142	cpsIaJ			S	Glycosyltransferase like family 2
BIIOCMJE_01486	1.6e-293	purH	2.1.2.3, 3.5.4.10		F	Bifunctional purine biosynthesis protein PurH
BIIOCMJE_01487	1.4e-147
BIIOCMJE_01488	2.6e-100	purN	2.1.2.2		F	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BIIOCMJE_01489	9.4e-189	purM	6.3.3.1, 6.3.4.13		F	Phosphoribosylformylglycinamidine cyclo-ligase
BIIOCMJE_01490	1.4e-275	purF	2.4.2.14		F	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BIIOCMJE_01491	0.0	purL	6.3.5.3		F	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BIIOCMJE_01492	4.9e-128	purC	4.1.1.21, 4.3.2.2, 6.3.2.6		F	Belongs to the SAICAR synthetase family
BIIOCMJE_01493	6.9e-29	acpP1			IQ	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BIIOCMJE_01494	3.5e-183	plsX	2.3.1.15		I	Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
BIIOCMJE_01495	7.5e-138	recO			L	Involved in DNA repair and RecF pathway recombination
BIIOCMJE_01496	6.7e-215	araT	2.6.1.1		E	Aminotransferase
BIIOCMJE_01497	9.5e-175	prs	2.7.6.1		F	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BIIOCMJE_01498	1.9e-84	usp	3.5.1.28	CBM50	S	CHAP domain
BIIOCMJE_01499	6.1e-83	mreD			M	rod shape-determining protein MreD
BIIOCMJE_01500	1.9e-110	mreC			M	Involved in formation and maintenance of cell shape
BIIOCMJE_01505	3.4e-14	rpmH			J	Ribosomal protein L34
BIIOCMJE_01506	7.9e-97		1.6.5.2		S	NADPH-quinone reductase (modulator of drug activity B)
BIIOCMJE_01507	3.1e-99				K	Transcriptional regulator
BIIOCMJE_01508	4.2e-168	jag			S	RNA-binding protein
BIIOCMJE_01509	1.4e-139	yidC			U	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BIIOCMJE_01510	7.2e-53	rnpA	3.1.26.5		J	RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
BIIOCMJE_01511	1.3e-262	argH	4.3.2.1		E	Argininosuccinate lyase
BIIOCMJE_01512	1.7e-229	argG	6.3.4.5		E	Belongs to the argininosuccinate synthase family. Type 1 subfamily
BIIOCMJE_01513	6.1e-129	fasA			KT	Response regulator of the LytR AlgR family
BIIOCMJE_01514	1.6e-225	fasC			T	protein histidine kinase activity
BIIOCMJE_01515	6.6e-208	hpk9	2.7.13.3		T	protein histidine kinase activity
BIIOCMJE_01516	9.5e-153	hpk9	2.7.13.3		T	protein histidine kinase activity
BIIOCMJE_01517	9.1e-229		2.7.13.3		T	signal transduction protein with a C-terminal ATPase domain
BIIOCMJE_01518	3e-273	gltX	6.1.1.17, 6.1.1.24		J	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BIIOCMJE_01519	0.0	amiA			E	ABC transporter, substrate-binding protein, family 5
BIIOCMJE_01520	2e-97	mip			S	hydroperoxide reductase activity
BIIOCMJE_01521	3.8e-201				I	acyl-CoA dehydrogenase
BIIOCMJE_01522	2.4e-151	ydiA			P	C4-dicarboxylate transporter malic acid transport
BIIOCMJE_01523	2.6e-245	msrR			K	Transcriptional regulator
BIIOCMJE_01524	1.4e-153	pheA	4.2.1.51		E	Prephenate dehydratase
BIIOCMJE_01525	1e-79	aroK	1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4		F	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BIIOCMJE_01526	1.9e-234	aroA	1.3.1.12, 1.3.1.43, 2.5.1.19		E	Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
BIIOCMJE_01527	3.2e-167	ldh	1.1.1.27		C	Belongs to the LDH MDH superfamily
BIIOCMJE_01528	4.2e-53	yheA			S	Belongs to the UPF0342 family
BIIOCMJE_01529	9.2e-206	tyrA	1.3.1.12, 1.3.1.43		E	prephenate dehydrogenase
BIIOCMJE_01530	6.4e-218	aroC	4.2.3.5		E	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BIIOCMJE_01531	5e-201	aroB	2.7.1.71, 4.2.3.4		E	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
BIIOCMJE_01532	1e-159	aroE	1.1.1.25		E	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BIIOCMJE_01533	4.1e-116	aroD	1.1.1.25, 4.2.1.10		E	Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
BIIOCMJE_01534	1.8e-215	ywbD	2.1.1.191		J	Methyltransferase
BIIOCMJE_01535	0.0	ltaS	2.7.8.20		M	Belongs to the LTA synthase family
BIIOCMJE_01536	7.8e-25	WQ51_00785
BIIOCMJE_01537	2.3e-100	vanY	3.4.17.14, 3.5.1.28		M	D-alanyl-D-alanine carboxypeptidase
BIIOCMJE_01538	8.8e-11				L	transposition
BIIOCMJE_01539	4.5e-228		2.7.13.3		T	GHKL domain
BIIOCMJE_01540	5.9e-132	agrA			KT	Response regulator of the LytR AlgR family
BIIOCMJE_01542	4.7e-51				L	COG1943 Transposase and inactivated derivatives
BIIOCMJE_01543	5.8e-31				L	Helix-turn-helix domain
BIIOCMJE_01544	3.7e-42
BIIOCMJE_01548	4.9e-103	xerS			D	Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division
BIIOCMJE_01549	9.7e-18
BIIOCMJE_01551	1.8e-57
BIIOCMJE_01552	3.2e-264	uvrX	2.7.7.7		L	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BIIOCMJE_01555	1.9e-07	plnP			V	CAAX protease self-immunity
BIIOCMJE_01557	5.6e-86	sigH			K	DNA-templated transcription, initiation
BIIOCMJE_01558	7.9e-135	ykuT			M	mechanosensitive ion channel
BIIOCMJE_01559	5.2e-229	tig			D	Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
BIIOCMJE_01560	1.3e-70	rpoE			K	Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
BIIOCMJE_01561	7.6e-310	pyrG	6.3.4.2		F	Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
BIIOCMJE_01562	1.1e-83	XK27_03960			S	Protein of unknown function (DUF3013)
BIIOCMJE_01563	4.9e-76	mutT3	3.6.1.13, 3.6.1.55		L	NUDIX domain
BIIOCMJE_01564	1.3e-176	prmA			J	Ribosomal protein L11 methyltransferase
BIIOCMJE_01565	3.2e-130	rsmE	2.1.1.193		J	Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
BIIOCMJE_01566	0.0	cpdB	3.1.3.6, 3.1.4.16		F	Belongs to the 5'-nucleotidase family
BIIOCMJE_01567	3.1e-83	nrdI			F	Belongs to the NrdI family
BIIOCMJE_01568	0.0	relA	2.7.6.5		KT	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BIIOCMJE_01569	2.2e-73	dtd			J	rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
BIIOCMJE_01571	8.5e-176	msrA	1.8.4.11, 1.8.4.12		O	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BIIOCMJE_01572	6.7e-15
BIIOCMJE_01573	1.1e-32				T	DNase/tRNase domain of colicin-like bacteriocin
BIIOCMJE_01574	0.0				S	Domain of unknown function DUF87
BIIOCMJE_01575	1.4e-129				T	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BIIOCMJE_01576	5.2e-232	brnQ			E	Component of the transport system for branched-chain amino acids
BIIOCMJE_01577	5.1e-181	manA	5.3.1.8		G	mannose-6-phosphate isomerase
BIIOCMJE_01578	1.5e-58				S	Protein of unknown function (DUF3290)
BIIOCMJE_01579	6e-101				S	Protein of unknown function (DUF421)
BIIOCMJE_01580	5.9e-15	csbD			K	CsbD-like
BIIOCMJE_01581	2.8e-107				S	Carbohydrate-binding domain-containing protein Cthe_2159
BIIOCMJE_01582	3.9e-39	XK27_01300			P	Protein conserved in bacteria
BIIOCMJE_01583	1.2e-57	yfnA			E	amino acid
BIIOCMJE_01584	1.7e-17
BIIOCMJE_01585	7.7e-29				K	Helix-turn-helix domain
BIIOCMJE_01587	8.6e-148	srtB	3.4.22.70		S	Sortase family
BIIOCMJE_01588	4.3e-233	capA			M	Bacterial capsule synthesis protein
BIIOCMJE_01589	8e-39	gcvR			T	UPF0237 protein
BIIOCMJE_01590	9.6e-242	XK27_08635			S	UPF0210 protein
BIIOCMJE_01591	4.3e-132	ais			G	Phosphoglycerate mutase
BIIOCMJE_01592	4.8e-140	vanY	3.4.17.14		M	D-alanyl-D-alanine carboxypeptidase
BIIOCMJE_01593	3.6e-100	acmA	3.2.1.17, 3.4.17.14, 3.5.1.28		NU	Muramidase (Flagellum-specific)
BIIOCMJE_01594	3.7e-185	hrcA			K	Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
BIIOCMJE_01595	2.6e-73	grpE			O	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BIIOCMJE_01596	2.3e-302	dnaK			O	Heat shock 70 kDa protein
BIIOCMJE_01597	4.2e-193	dnaJ			O	ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
BIIOCMJE_01598	1e-139	truA	5.4.99.12		J	Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
BIIOCMJE_01599	3.1e-136	thiD	2.7.1.35, 2.7.1.49, 2.7.4.7		H	phosphomethylpyrimidine kinase
BIIOCMJE_01600	7.4e-80	hmpT			S	cog cog4720
BIIOCMJE_01601	2.3e-294	prkC	2.7.11.1		KLT	serine threonine protein kinase
BIIOCMJE_01602	1e-134	stp	3.1.3.16		T	phosphatase
BIIOCMJE_01603	3.4e-239	sun	2.1.1.176		J	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BIIOCMJE_01604	9.9e-169	fmt	2.1.2.9		J	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BIIOCMJE_01605	0.0	priA			L	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BIIOCMJE_01606	3.6e-46	rpoZ	2.7.7.6		K	DNA-directed 5'-3' RNA polymerase activity
BIIOCMJE_01607	4.4e-112	gmk	2.7.4.8		F	Essential for recycling GMP and indirectly, cGMP
BIIOCMJE_01608	1.8e-195	ftsY			U	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
BIIOCMJE_01609	4.3e-144	XK27_02985			S	overlaps another CDS with the same product name
BIIOCMJE_01610	1.3e-145	supH			S	overlaps another CDS with the same product name
BIIOCMJE_01611	1.9e-62	yvoA_1			K	Transcriptional
BIIOCMJE_01612	5.4e-119	skfE			V	abc transporter atp-binding protein
BIIOCMJE_01613	1.4e-128				V	Psort location CytoplasmicMembrane, score
BIIOCMJE_01614	1e-170	oppF			P	Belongs to the ABC transporter superfamily
BIIOCMJE_01615	6.4e-81	oppD			P	Belongs to the ABC transporter superfamily
BIIOCMJE_01616	8e-202	dinB	2.7.7.7		L	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BIIOCMJE_01617	1e-34
BIIOCMJE_01618	2.6e-152	yxeM			ET	ABC-type amino acid transport signal transduction systems, periplasmic component domain
BIIOCMJE_01619	1.4e-162	yxeN			P	ABC transporter (Permease
BIIOCMJE_01620	6.1e-129	tcyN	3.6.3.21		E	abc transporter atp-binding protein
BIIOCMJE_01621	5e-10				S	Protein of unknown function (DUF4059)
BIIOCMJE_01622	2.1e-171	trxB	1.8.1.9		C	Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
BIIOCMJE_01623	9.6e-92	rsmD	2.1.1.171		L	Methyltransferase
BIIOCMJE_01624	1.9e-86	coaD	2.7.7.3		H	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BIIOCMJE_01625	3.2e-187	ylbL			T	Belongs to the peptidase S16 family
BIIOCMJE_01626	1e-181	yhcC			S	radical SAM protein
BIIOCMJE_01627	1.9e-95	ytqB			J	(SAM)-dependent
BIIOCMJE_01629	0.0	yjcE			P	NhaP-type Na H and K H antiporters
BIIOCMJE_01630	1e-24
BIIOCMJE_01631	5.5e-133	yejC			S	cyclic nucleotide-binding protein
BIIOCMJE_01632	5.9e-198				D	nuclear chromosome segregation
BIIOCMJE_01633	1.4e-94	queF	1.7.1.13		S	Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily
BIIOCMJE_01634	2.5e-135	queE	1.97.1.4, 4.3.99.3		H	Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
BIIOCMJE_01635	1.1e-80	queD	4.1.2.50, 4.2.3.12		H	synthase
BIIOCMJE_01636	2.6e-123	queC	6.3.4.20		F	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
BIIOCMJE_01637	2.3e-63	tdcF	3.5.99.10		J	endoribonuclease L-PSP
BIIOCMJE_01638	1.7e-19
BIIOCMJE_01639	3.2e-261	asnS	6.1.1.22		J	Catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
BIIOCMJE_01640	9.1e-212	aspB	2.6.1.1, 2.6.1.14		E	Aminotransferase
BIIOCMJE_01641	6.4e-79	ypmB			S	Protein conserved in bacteria
BIIOCMJE_01642	0.0	dinG	2.7.7.7, 3.6.4.12		L	helicase involved in DNA repair and perhaps also replication
BIIOCMJE_01643	6.1e-114	ycbL	3.1.2.6		S	COG0491 Zn-dependent hydrolases, including glyoxylases
BIIOCMJE_01644	2.3e-168	yufQ			S	Belongs to the binding-protein-dependent transport system permease family
BIIOCMJE_01645	9.4e-59	yufP			S	Belongs to the binding-protein-dependent transport system permease family
BIIOCMJE_01646	1.3e-288	ytgP			S	Membrane protein involved in the export of O-antigen and teichoic acid
BIIOCMJE_01647	3.6e-271	murE	6.3.2.13, 6.3.2.7		M	to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BIIOCMJE_01648	2.9e-192	femA	2.3.2.16, 2.3.2.17, 2.3.2.18		V	protein involved in methicillin resistance
BIIOCMJE_01649	6.1e-97	yvdD	3.2.2.10		S	Belongs to the LOG family
BIIOCMJE_01650	1.9e-56	rbfA			J	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BIIOCMJE_01651	0.0	infB			J	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BIIOCMJE_01652	1.5e-46	ylxQ			J	ribosomal protein
BIIOCMJE_01653	1e-47	ylxR			K	Nucleic-acid-binding protein implicated in transcription termination
BIIOCMJE_01654	2.4e-196	nusA			K	Participates in both transcription termination and antitermination
BIIOCMJE_01655	2.3e-81	rimP			S	Required for maturation of 30S ribosomal subunits
BIIOCMJE_01656	5.7e-188	brpA			K	Transcriptional
BIIOCMJE_01657	3e-90	XK27_05885	2.3.1.82		M	phosphinothricin N-acetyltransferase activity
BIIOCMJE_01658	1e-75	ydiB	2.7.1.221, 5.1.1.1		M	ATPase or kinase
BIIOCMJE_01659	1.8e-51	pbuO			S	permease
BIIOCMJE_01660	0.0	scrA	2.7.1.201, 2.7.1.208, 2.7.1.211		G	pts system
BIIOCMJE_01661	5.8e-285	scrB	3.2.1.26, 3.2.1.80	GH32	G	invertase
BIIOCMJE_01662	2e-180	scrR			K	Transcriptional regulator
BIIOCMJE_01663	8.1e-73	nusB			K	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BIIOCMJE_01664	1.7e-61	yqhY			S	protein conserved in bacteria
BIIOCMJE_01665	7.1e-98	efp			J	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BIIOCMJE_01666	1.6e-84	comEB	3.5.4.12		F	ComE operon protein 2
BIIOCMJE_01667	5.4e-187	pepP	3.4.11.9, 3.4.13.9		E	Belongs to the peptidase M24B family
BIIOCMJE_01669	1.6e-146				V	'abc transporter, ATP-binding protein
BIIOCMJE_01670	2.1e-32	blpT
BIIOCMJE_01674	0.0	uvrA			L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BIIOCMJE_01675	3.8e-130				T	PhoQ Sensor
BIIOCMJE_01676	8.4e-125				T	Xre family transcriptional regulator
BIIOCMJE_01677	3.5e-109	drgA			C	nitroreductase
BIIOCMJE_01678	2.4e-111	yoaK			S	Protein of unknown function (DUF1275)
BIIOCMJE_01679	4.5e-39				DJ	nuclease activity
BIIOCMJE_01680	4.2e-30	XK27_10490
BIIOCMJE_01681	3.1e-161	yvgN			C	reductase
BIIOCMJE_01682	3e-215				S	Tetratricopeptide repeat
BIIOCMJE_01683	0.0	lacL	3.2.1.23		G	-beta-galactosidase
BIIOCMJE_01684	0.0	lacS			G	transporter
BIIOCMJE_01685	3.4e-202	galM	5.1.3.3		G	Catalyzes the interconversion of alpha and beta anomers of maltose
BIIOCMJE_01686	5.6e-194	galE	5.1.3.2		M	Belongs to the NAD(P)-dependent epimerase dehydratase family
BIIOCMJE_01687	2.7e-45	galT	2.7.7.12		G	UDPglucose--hexose-1-phosphate uridylyltransferase
BIIOCMJE_01688	3.4e-73	alaA	2.6.1.2, 2.6.1.66		E	Aminotransferase
BIIOCMJE_01689	8.1e-140	codY			K	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
BIIOCMJE_01690	4.4e-100	pncA			Q	isochorismatase
BIIOCMJE_01691	2e-290	ascB	3.2.1.86	GT1	G	Belongs to the glycosyl hydrolase 1 family
BIIOCMJE_01692	1.5e-217				M	lipopolysaccharide 3-alpha-galactosyltransferase activity
BIIOCMJE_01693	1.8e-156				H	COG0463 Glycosyltransferases involved in cell wall biogenesis
BIIOCMJE_01694	2.6e-191				M	A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
BIIOCMJE_01695	4.7e-234		2.4.1.52	GT4	M	An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
BIIOCMJE_01696	1.4e-47	gatC	6.3.5.6, 6.3.5.7		J	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BIIOCMJE_01697	1.2e-266	gatA	6.3.5.6, 6.3.5.7		J	Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
BIIOCMJE_01698	5.1e-273	gatB	6.1.1.12, 6.3.5.6, 6.3.5.7		J	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BIIOCMJE_01700	1.5e-137	WQ51_06230			S	ABC transporter
BIIOCMJE_01701	8.8e-142	cmpC			S	abc transporter atp-binding protein
BIIOCMJE_01702	4.9e-42	groS			O	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BIIOCMJE_01703	1.7e-285	groL			O	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
BIIOCMJE_01705	3.2e-44
BIIOCMJE_01706	5.8e-55				S	TM2 domain
BIIOCMJE_01707	3.5e-160	rluA	5.4.99.23		J	Responsible for synthesis of pseudouridine from uracil
BIIOCMJE_01708	0.0	pbp2A	2.4.1.129, 3.4.16.4	GT51	M	penicillin-binding protein
BIIOCMJE_01709	6.2e-20	rpmG			J	Belongs to the bacterial ribosomal protein bL33 family
BIIOCMJE_01710	2.8e-24	secE			U	Belongs to the SecE SEC61-gamma family
BIIOCMJE_01711	8.4e-96	nusG			K	Participates in transcription elongation, termination and antitermination
BIIOCMJE_01712	7.6e-72		3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27		I	phosphatidate phosphatase activity
BIIOCMJE_01713	7.3e-144	cof			S	Sucrose-6F-phosphate phosphohydrolase
BIIOCMJE_01714	6.1e-132	glcR			K	transcriptional regulator (DeoR family)
BIIOCMJE_01715	8.4e-281	leuS	6.1.1.4		J	Belongs to the class-I aminoacyl-tRNA synthetase family
BIIOCMJE_01717	7.4e-19
BIIOCMJE_01718	1.1e-95	rimL	2.3.1.128, 5.2.1.8		J	COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
BIIOCMJE_01719	1.7e-102				S	COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BIIOCMJE_01720	1.4e-14	coiA	3.6.4.12		S	Competence protein
BIIOCMJE_01721	2.9e-15				T	peptidase
BIIOCMJE_01722	1.6e-147	rarD			S	Transporter
BIIOCMJE_01723	2.9e-151	thrB	2.7.1.39		E	Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
BIIOCMJE_01724	2.6e-236	hom	1.1.1.3, 2.7.2.4		E	homoserine dehydrogenase
BIIOCMJE_01725	2.1e-136	yxkH			G	deacetylase
BIIOCMJE_01726	3.7e-202	argD	2.6.1.11, 2.6.1.17		E	acetylornithine aminotransferase
BIIOCMJE_01727	1.2e-124	argB	2.7.2.8		E	Belongs to the acetylglutamate kinase family. ArgB subfamily
BIIOCMJE_01728	1.5e-217	argJ	2.3.1.1, 2.3.1.35, 2.7.2.8		E	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
BIIOCMJE_01729	3.8e-182	argC	1.2.1.38		E	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BIIOCMJE_01730	3.7e-108	mtnE	2.6.1.83		E	mutations do not affect methionine salvage in vivo however
BIIOCMJE_01732	2.4e-43	rpsP			J	Belongs to the bacterial ribosomal protein bS16 family
BIIOCMJE_01733	1.5e-36	ylqC			L	Belongs to the UPF0109 family
BIIOCMJE_01734	1.8e-234	folC	6.3.2.12, 6.3.2.17		H	Belongs to the folylpolyglutamate synthase family
BIIOCMJE_01735	0.0	ydaO			E	amino acid
BIIOCMJE_01736	7.7e-100	folE	3.5.4.16		F	gtp cyclohydrolase
BIIOCMJE_01737	1.3e-145	folP	2.5.1.15, 2.7.6.3		H	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BIIOCMJE_01738	2.8e-295	amy	3.2.1.1	GH13	G	Belongs to the glycosyl hydrolase 13 family
BIIOCMJE_01739	2.9e-60	folB	1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8		H	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BIIOCMJE_01740	6.1e-77	folK	2.7.6.3, 4.1.2.25		H	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BIIOCMJE_01741	9.9e-166	murB	1.3.1.98		M	cell wall formation
BIIOCMJE_01742	5.2e-212	potA	3.6.3.30, 3.6.3.31		P	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
BIIOCMJE_01743	1.1e-139	potB			P	ABC-type spermidine putrescine transport system, permease component I
BIIOCMJE_01744	2.3e-131	potC			P	ABC-type spermidine putrescine transport system, permease component II
BIIOCMJE_01745	4.8e-204	potD			P	spermidine putrescine ABC transporter
BIIOCMJE_01746	4.9e-255				S	Glucan-binding protein C
BIIOCMJE_01747	4.4e-164	coiA	3.6.4.12		S	Competence protein
BIIOCMJE_01748	0.0	pepF			E	oligoendopeptidase F
BIIOCMJE_01749	4.5e-214	oxlT			P	COG0477 Permeases of the major facilitator superfamily
BIIOCMJE_01750	1.4e-119	yrrM	2.1.1.104		S	O-Methyltransferase
BIIOCMJE_01751	6.2e-165	prsA	3.1.3.16, 5.2.1.8		O	peptidyl-prolyl cis-trans isomerase activity
BIIOCMJE_01752	3.5e-85	yxjI			S	LURP-one-related
BIIOCMJE_01753	0.0	alaS	6.1.1.7		J	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BIIOCMJE_01754	2.3e-187	leuB	1.1.1.85		CE	Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
BIIOCMJE_01755	2.8e-276	leuC	4.2.1.33, 4.2.1.35		E	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BIIOCMJE_01756	2.4e-112	leuD	4.2.1.33, 4.2.1.35		E	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BIIOCMJE_01757	0.0	dnaE	2.7.7.7		L	DNA polymerase
BIIOCMJE_01758	1.1e-184	pfkA	2.7.1.11		F	Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
BIIOCMJE_01759	6e-277	pyk	2.7.1.40, 2.7.7.4		G	Belongs to the pyruvate kinase family
BIIOCMJE_01760	7.8e-154	yitU	3.1.3.104		S	hydrolases of the HAD superfamily
BIIOCMJE_01761	3.2e-138	XK27_00940	1.2.1.70, 3.5.1.9		S	Metal-dependent hydrolase
BIIOCMJE_01762	6.2e-169	manL	2.7.1.191		G	pts system
BIIOCMJE_01763	5.7e-133	manY			G	pts system
BIIOCMJE_01764	5.9e-158	manN			G	PTS system mannose fructose sorbose family IID component
BIIOCMJE_01765	5.9e-67	manO			S	Protein conserved in bacteria
BIIOCMJE_01766	4.9e-174	manL	2.7.1.191		G	pts system
BIIOCMJE_01767	1.2e-114	manM			G	pts system
BIIOCMJE_01768	4e-167	manN			G	PTS system mannose fructose sorbose family IID component
BIIOCMJE_01769	2.5e-62	manO			S	protein conserved in bacteria
BIIOCMJE_01770	6.2e-230	serS	6.1.1.11		J	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
BIIOCMJE_01771	7.7e-112
BIIOCMJE_01772	2e-58	der	1.1.1.399, 1.1.1.95		S	GTPase that plays an essential role in the late steps of ribosome biogenesis
BIIOCMJE_01773	3e-154	XK27_03015			S	permease
BIIOCMJE_01774	2.4e-147	ycgQ			S	TIGR03943 family
BIIOCMJE_01775	7.4e-276	sulP			P	Sulfate permease and related transporters (MFS superfamily)
BIIOCMJE_01776	7.6e-101
BIIOCMJE_01777	3.1e-113	estA			E	GDSL-like Lipase/Acylhydrolase
BIIOCMJE_01778	4.9e-92				S	CAAX protease self-immunity
BIIOCMJE_01779	3.2e-51
BIIOCMJE_01781	3.7e-63	yqeB			S	Pyrimidine dimer DNA glycosylase
BIIOCMJE_01782	2.9e-61				S	Protein of unknown function (DUF1722)
BIIOCMJE_01783	1.3e-19				M	Bacterial lipoprotein
BIIOCMJE_01784	5.2e-11
BIIOCMJE_01785	1.6e-23				V	CAAX protease self-immunity
BIIOCMJE_01786	1.6e-25				V	CAAX protease self-immunity
BIIOCMJE_01787	1.2e-46
BIIOCMJE_01788	6.8e-75				K	TetR family transcriptional regulator
BIIOCMJE_01789	1.9e-80				Q	Methyltransferase domain
BIIOCMJE_01790	2.1e-142	acoC	2.3.1.12, 2.3.1.61		C	Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
BIIOCMJE_01791	1.8e-67	acoB			C	COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
BIIOCMJE_01792	0.0	uvrC			L	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
BIIOCMJE_01793	4.4e-129	yjjG	3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2		E	hydrolase
BIIOCMJE_01794	2.5e-121	sdaAB	4.3.1.17		E	L-serine dehydratase
BIIOCMJE_01795	4.4e-147	sdaAA	4.3.1.17		E	L-serine dehydratase
BIIOCMJE_01796	0.0	fruA	3.2.1.1, 3.2.1.26, 3.2.1.65, 3.2.1.80	GH13,GH32	G	Belongs to the glycosyl hydrolase 32 family
BIIOCMJE_01797	3.1e-159	yjlA			EG	membrane
BIIOCMJE_01798	1.1e-79		3.4.21.89		S	RDD family
BIIOCMJE_01799	3.7e-82
BIIOCMJE_01800	5.1e-08
BIIOCMJE_01801	8e-223	mltG			ADL	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BIIOCMJE_01802	1.2e-77	greA			K	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
BIIOCMJE_01803	3e-162	yidC			U	Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BIIOCMJE_01804	1.6e-42	acyP	3.6.1.7		C	Belongs to the acylphosphatase family
BIIOCMJE_01805	5.1e-128	spoU	2.1.1.185		J	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BIIOCMJE_01806	7.3e-94	XK27_09705	6.1.1.14		S	HD superfamily hydrolase
BIIOCMJE_01807	8.5e-101	ybhL			S	Belongs to the BI1 family
BIIOCMJE_01808	7.1e-12	ycdA			S	Domain of unknown function (DUF4352)
BIIOCMJE_01809	9.9e-241	lysA	4.1.1.20		E	Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
BIIOCMJE_01810	4.5e-89				K	transcriptional regulator
BIIOCMJE_01811	1.6e-36	yneF			S	UPF0154 protein
BIIOCMJE_01812	3.4e-149	murI	5.1.1.3		M	Provides the (R)-glutamate required for cell wall biosynthesis
BIIOCMJE_01813	5.3e-181	rdgB	3.6.1.66, 5.1.1.3		F	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BIIOCMJE_01814	2.1e-96	XK27_09740			S	Phosphoesterase
BIIOCMJE_01815	2.1e-85	ykuL			S	CBS domain
BIIOCMJE_01816	2.3e-69	rpsL			J	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BIIOCMJE_01817	3.9e-81	rpsG			J	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
BIIOCMJE_01818	0.0	fusA			J	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BIIOCMJE_01819	7.1e-181	gap	1.2.1.12		C	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
BIIOCMJE_01820	9.9e-222	pgk	2.7.2.3, 5.3.1.1		F	Belongs to the phosphoglycerate kinase family
BIIOCMJE_01821	1.6e-85				S	Fusaric acid resistance protein-like
BIIOCMJE_01822	8.5e-63	glnR			K	Transcriptional regulator
BIIOCMJE_01823	5.2e-264	glnA	6.3.1.2		E	glutamine synthetase
BIIOCMJE_01824	1.5e-115	pscB			M	CHAP domain protein
BIIOCMJE_01825	0.0	rnjA			S	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BIIOCMJE_01827	1.5e-141	trpA	4.2.1.20		E	The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
BIIOCMJE_01828	3.4e-230	trpB	4.2.1.20, 5.3.1.24		E	The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
BIIOCMJE_01829	8.2e-97	trpF	4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24		E	belongs to the TrpF family
BIIOCMJE_01830	2.1e-132	trpC	4.1.1.48, 5.3.1.24		E	Belongs to the TrpC family
BIIOCMJE_01831	1.5e-178	trpD	2.4.2.18, 4.1.3.27		F	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BIIOCMJE_01832	2.7e-105	trpG	2.4.2.18, 2.6.1.85, 4.1.3.27		EH	anthranilate
BIIOCMJE_01833	3.1e-256	trpE	4.1.3.27		EH	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BIIOCMJE_01834	2.2e-39	pchB	2.5.1.19, 4.2.1.10, 4.2.99.21, 5.4.99.5		E	Chorismate mutase
BIIOCMJE_01835	2.2e-58
BIIOCMJE_01836	0.0	ctpE			P	E1-E2 ATPase
BIIOCMJE_01837	4.4e-46
BIIOCMJE_01839	3.5e-07
BIIOCMJE_01841	4.3e-30	radC			E	Belongs to the UPF0758 family
BIIOCMJE_01846	8.6e-09				S	ERF superfamily
BIIOCMJE_01847	2.4e-65	pi112	3.6.4.12		L	PDDEXK-like domain of unknown function (DUF3799)
BIIOCMJE_01848	4.7e-33	ssb			L	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
BIIOCMJE_01851	1.2e-15				L	Transposase, IS605 OrfB family
BIIOCMJE_01852	2.2e-101
BIIOCMJE_01854	2e-42
BIIOCMJE_01855	0.0				GM	domain, Protein
BIIOCMJE_01856	3.5e-219	sbcD			L	SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
BIIOCMJE_01857	0.0	sbcC			L	ATPase involved in DNA repair
BIIOCMJE_01858	0.0				M	family 8
BIIOCMJE_01859	3.1e-159	miaA	2.5.1.75		J	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BIIOCMJE_01860	3.2e-20	WQ51_02665			S	Protein of unknown function (DUF3042)
BIIOCMJE_01863	1.1e-56	rplS			J	This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
BIIOCMJE_01864	2.9e-208	XK27_05110			P	Chloride transporter ClC family
BIIOCMJE_01865	1.2e-37	pheA	1.3.1.12, 2.3.1.79, 4.2.1.51, 5.4.99.5		E	Chorismate mutase
BIIOCMJE_01866	8.6e-279	clcA			P	Chloride transporter, ClC family
BIIOCMJE_01867	3.9e-75	fld			C	Flavodoxin
BIIOCMJE_01868	2.2e-18	XK27_08880
BIIOCMJE_01869	4.7e-126	XK27_08875			O	Zinc-dependent metalloprotease
BIIOCMJE_01870	3.6e-148	estA		CE1	S	Esterase
BIIOCMJE_01871	1.3e-309	rnjB			S	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BIIOCMJE_01872	3.8e-102	XK27_08845			S	abc transporter atp-binding protein
BIIOCMJE_01873	0.0	glgB	2.4.1.18, 3.2.1.141, 3.2.1.20	CBM48,GH13,GH31	G	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BIIOCMJE_01874	4.8e-175	glgC	2.7.7.27		H	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BIIOCMJE_01875	7e-177	glgD	2.4.1.21, 2.7.7.27	GT5	G	glucose-1-phosphate adenylyltransferase
BIIOCMJE_01876	2.7e-282	glgA	2.4.1.21	GT5	G	Synthesizes alpha-1,4-glucan chains using ADP-glucose
BIIOCMJE_01877	0.0	glgP	2.4.1.1	GT35	G	Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
BIIOCMJE_01878	1.8e-101		2.3.1.128		K	Acetyltransferase GNAT Family
BIIOCMJE_01879	1.4e-284				S	Protein of unknown function (DUF3114)
BIIOCMJE_01881	4.6e-62				L	Transposase
BIIOCMJE_01882	3e-59				L	Transposase and inactivated derivatives
BIIOCMJE_01883	1.3e-123				V	AAA domain, putative AbiEii toxin, Type IV TA system
BIIOCMJE_01884	1.8e-123				S	ABC-2 family transporter protein
BIIOCMJE_01885	1.9e-79
BIIOCMJE_01886	1.4e-103				T	Transcriptional regulatory protein, C terminal
BIIOCMJE_01887	2.9e-159		2.7.13.3		T	Histidine kinase
BIIOCMJE_01888	7.4e-40				L	Integrase core domain
BIIOCMJE_01889	2.5e-50				L	transposase and inactivated derivatives, IS30 family
BIIOCMJE_01890	2.4e-133	agrA			KT	phosphorelay signal transduction system
BIIOCMJE_01891	1.3e-227		2.7.13.3		T	GHKL domain
BIIOCMJE_01892	2e-14
BIIOCMJE_01893	1.5e-250	murF	6.3.2.10		M	Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
BIIOCMJE_01894	7.4e-118	ywaF			S	Integral membrane protein (intg_mem_TP0381)
BIIOCMJE_01895	2.3e-300	prfC			J	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
BIIOCMJE_01896	4.5e-195	yjbB			G	Permeases of the major facilitator superfamily
BIIOCMJE_01897	1.5e-155	Z012_04635			K	Transcriptional activator, Rgg GadR MutR family
BIIOCMJE_01898	4e-96	thiT			S	Thiamine transporter
BIIOCMJE_01899	2.5e-62	yjqA			S	Bacterial PH domain
BIIOCMJE_01900	1.4e-151	corA			P	CorA-like protein
BIIOCMJE_01901	2e-37	lrgA			S	Effector of murein hydrolase LrgA
BIIOCMJE_01902	9.4e-116	lrgB			M	Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgA, with the holin-like proteins CidA and or CidB. The LrgAB and CidAB proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses
BIIOCMJE_01903	1.9e-95		3.1.3.18		S	IA, variant 1
BIIOCMJE_01904	0.0	gyrB	5.99.1.3		L	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BIIOCMJE_01905	4.9e-299	ezrA			D	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
BIIOCMJE_01906	2.5e-110	serB	3.1.3.3		E	phosphoserine phosphatase
BIIOCMJE_01907	8.5e-08				N	PFAM Uncharacterised protein family UPF0150
BIIOCMJE_01908	7.5e-150				EG	Permeases of the drug metabolite transporter (DMT) superfamily
BIIOCMJE_01910	8.6e-60	ycaO			O	OsmC-like protein
BIIOCMJE_01911	1.9e-62	paaI			Q	protein possibly involved in aromatic compounds catabolism
BIIOCMJE_01912	9.8e-10				O	ADP-ribosylglycohydrolase
BIIOCMJE_01913	3.3e-153				K	sequence-specific DNA binding
BIIOCMJE_01914	4.4e-107	bcrC	3.6.1.27		I	Membrane-associated phospholipid phosphatase
BIIOCMJE_01915	1.3e-88	ribU			U	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BIIOCMJE_01916	4.4e-94	trmL	2.1.1.207		J	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
BIIOCMJE_01917	1.2e-244	trkA			P	Potassium transporter peripheral membrane component
BIIOCMJE_01918	6e-258	trkH			P	Cation transport protein
BIIOCMJE_01919	1.8e-13	yidD			M	Could be involved in insertion of integral membrane proteins into the membrane
BIIOCMJE_01920	3.4e-132	rluB	5.4.99.19, 5.4.99.21, 5.4.99.22		J	Belongs to the pseudouridine synthase RsuA family
BIIOCMJE_01921	6.9e-96	scpB			D	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BIIOCMJE_01922	1e-120	scpA			D	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BIIOCMJE_01923	7.2e-59	xerD			L	tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site
BIIOCMJE_01924	3.8e-69	cobQ			S	glutamine amidotransferase
BIIOCMJE_01925	0.0	mprF	2.3.2.3		J	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BIIOCMJE_01926	4.8e-131	pip	1.11.1.10		S	Alpha beta hydrolase
BIIOCMJE_01927	2.7e-39	MA20_06245			S	yiaA/B two helix domain
BIIOCMJE_01928	0.0	uup			S	abc transporter atp-binding protein
BIIOCMJE_01929	3.1e-113	udk	2.7.1.48		F	Cytidine monophosphokinase
BIIOCMJE_01930	3.3e-176	yfmL	3.6.4.13		L	DEAD DEAH box helicase
BIIOCMJE_01931	1.1e-220	XK27_05680	6.3.2.2, 6.3.2.4		M	carbamoylphosphate synthase large subunit
BIIOCMJE_01932	2.7e-153	XK27_05675			S	Esterase
BIIOCMJE_01934	2.1e-185	nss			M	transferase activity, transferring glycosyl groups
BIIOCMJE_01935	3.6e-16				S	Accessory secretory protein Sec, Asp5
BIIOCMJE_01936	9.9e-17				S	Accessory secretory protein Sec Asp4
BIIOCMJE_01937	1.8e-243	gtf2			M	A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
BIIOCMJE_01938	2.4e-281	gtf1	2.4.1.52	GT4	M	An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
BIIOCMJE_01939	0.0	secA2			U	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
BIIOCMJE_01940	3.5e-223	ftsA			D	Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
BIIOCMJE_01941	2.1e-233	ftsZ			D	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BIIOCMJE_01942	2.4e-119	ylmE			S	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BIIOCMJE_01943	3.4e-90	sepF			D	cell septum assembly
BIIOCMJE_01944	1.7e-30	yggT			D	integral membrane protein
BIIOCMJE_01945	1.3e-137	ylmH			S	conserved protein, contains S4-like domain
BIIOCMJE_01946	5.5e-137	divIVA			D	Cell division initiation protein
BIIOCMJE_01947	2.1e-176	ileS	6.1.1.5		J	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BIIOCMJE_01948	0.0	ileS	6.1.1.5		J	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BIIOCMJE_01949	4.1e-141	nrdF	1.17.4.1		F	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BIIOCMJE_01950	7.4e-182	yhjX			P	Major Facilitator
BIIOCMJE_01951	5.4e-43	rpsO			J	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BIIOCMJE_01952	4.4e-82				V	VanZ like family
BIIOCMJE_01953	3.9e-175				D	nuclear chromosome segregation
BIIOCMJE_01954	2.2e-123	glnQ			E	abc transporter atp-binding protein
BIIOCMJE_01955	4.3e-270	glnP			P	ABC transporter
BIIOCMJE_01956	1.5e-152	uppP	3.6.1.27		V	Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
BIIOCMJE_01957	8.3e-18				S	Protein of unknown function (DUF3021)
BIIOCMJE_01958	4e-72				S	Region found in RelA / SpoT proteins
BIIOCMJE_01959	1.7e-28	dnaG			L	DNA primase activity
BIIOCMJE_01960	3.7e-26	soj			D	ATPases involved in chromosome partitioning
BIIOCMJE_01962	1.5e-06				L	Psort location Cytoplasmic, score 8.96
BIIOCMJE_01963	2.1e-15	xerS			L	Belongs to the 'phage' integrase family
BIIOCMJE_01966	2.2e-10
BIIOCMJE_01967	3.4e-187	XK27_10075			S	abc transporter atp-binding protein
BIIOCMJE_01968	0.0				V	abc transporter atp-binding protein
BIIOCMJE_01969	1.9e-298				V	abc transporter atp-binding protein
BIIOCMJE_01970	2.5e-147	truB	5.4.99.25		J	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BIIOCMJE_01971	1.3e-235	XK27_04775			S	hemerythrin HHE cation binding domain
BIIOCMJE_01972	4.7e-35	M1-755			P	Hemerythrin HHE cation binding domain protein
BIIOCMJE_01973	8.1e-111	hsdS2	2.1.1.72		V	Type I restriction modification DNA specificity domain
BIIOCMJE_01974	1.2e-85	tpx	1.11.1.15		O	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BIIOCMJE_01975	2.3e-136				S	haloacid dehalogenase-like hydrolase
BIIOCMJE_01976	2.3e-240	metY	2.5.1.49		E	o-acetylhomoserine
BIIOCMJE_01977	0.0	pcrA	3.6.4.12		L	ATP-dependent DNA helicase
BIIOCMJE_01978	1.6e-91	ykoD			P	abc transporter atp-binding protein
BIIOCMJE_01979	5e-148	cbiQ			P	cobalt transport
BIIOCMJE_01980	3.7e-117	ktrA			P	COG0569 K transport systems, NAD-binding component
BIIOCMJE_01981	4e-235				P	COG0168 Trk-type K transport systems, membrane components
BIIOCMJE_01982	3.5e-126	rsmG	2.1.1.170		J	Ribosomal RNA small subunit methyltransferase G
BIIOCMJE_01983	1.5e-89	yceD			K	metal-binding, possibly nucleic acid-binding protein
BIIOCMJE_01984	7.9e-123				T	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
BIIOCMJE_01985	3.3e-278				T	PhoQ Sensor
BIIOCMJE_01986	3e-81	nrdR			K	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BIIOCMJE_01987	2.4e-212	dnaB			L	Replication initiation and membrane attachment
BIIOCMJE_01988	1.7e-111	galT	2.7.7.12		G	UDPglucose--hexose-1-phosphate uridylyltransferase
BIIOCMJE_01989	7.9e-244	hflX			S	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BIIOCMJE_01990	5.4e-227	rodA			D	Belongs to the SEDS family
BIIOCMJE_01991	0.0		2.4.1.5	GH13	M	KxYKxGKxW signal domain protein
BIIOCMJE_01992	4e-178	cbf			S	3'-5' exoribonuclease yhaM
BIIOCMJE_01993	7.9e-169	rmuC			S	RmuC domain protein
BIIOCMJE_01994	5.2e-113	thiN	2.7.6.2		H	thiamine pyrophosphokinase
BIIOCMJE_01995	6.6e-119	rpe	5.1.3.1		G	Belongs to the ribulose-phosphate 3-epimerase family
BIIOCMJE_01996	7.8e-160	rsgA	3.1.3.100		G	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
BIIOCMJE_01998	2.4e-153	ksgA	2.1.1.182		J	Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
BIIOCMJE_01999	7.1e-98	rnmV	3.1.26.8		J	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BIIOCMJE_02000	1e-142	tatD			L	Hydrolase, tatd
BIIOCMJE_02001	8.3e-70	yccU			S	CoA-binding protein
BIIOCMJE_02002	2.4e-50	trxA			O	Belongs to the thioredoxin family
BIIOCMJE_02003	9.9e-78
BIIOCMJE_02004	4.7e-66
BIIOCMJE_02005	9.2e-22				S	Protein of unknown function (DUF1643)
BIIOCMJE_02007	0.0	hsdM	2.1.1.72		V	Type I restriction-modification system
BIIOCMJE_02008	2.2e-91	hsdS	3.1.21.3		V	type I restriction modification DNA specificity domain protein
BIIOCMJE_02009	2e-30				L	DNA synthesis involved in DNA repair
BIIOCMJE_02010	3.2e-10				V	endonuclease activity
BIIOCMJE_02011	5e-24	hsdM	2.1.1.72		V	type I restriction-modification system
BIIOCMJE_02012	1.3e-38	hsdM	2.1.1.72		V	type I restriction-modification system
BIIOCMJE_02013	4.2e-41				S	PD-(D/E)XK nuclease family transposase
BIIOCMJE_02014	3.2e-69				S	double-stranded DNA endodeoxyribonuclease activity
BIIOCMJE_02015	0.0		2.4.1.21	GT5	M	Right handed beta helix region
BIIOCMJE_02016	3.2e-138	livM			E	Belongs to the binding-protein-dependent transport system permease family
BIIOCMJE_02017	1.2e-144	livH			E	Belongs to the binding-protein-dependent transport system permease family
BIIOCMJE_02018	6.5e-210	livJ			E	COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component
BIIOCMJE_02019	1.9e-46	ylbG			S	UPF0298 protein
BIIOCMJE_02020	1.1e-72	ylbF			S	Belongs to the UPF0342 family
BIIOCMJE_02021	3.7e-105	clpP	3.4.21.92		OU	Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
BIIOCMJE_02022	5.7e-112	upp	2.4.2.9		F	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BIIOCMJE_02023	0.0	sacB	2.4.1.10, 2.4.1.9, 3.2.1.26	GH32,GH68	G	Belongs to the glycosyl hydrolase 68 family
BIIOCMJE_02025	7.2e-245	norM			V	Multidrug efflux pump
BIIOCMJE_02026	3.7e-143				K	sequence-specific DNA binding
BIIOCMJE_02027	2e-270				V	(ABC) transporter
BIIOCMJE_02028	1.7e-56	pdxH			S	pyridoxamine 5'-phosphate oxidase
BIIOCMJE_02029	1.5e-223	pbuX			F	xanthine permease
BIIOCMJE_02030	6.7e-99	xpt	2.4.2.22, 2.4.2.7		F	Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
BIIOCMJE_02031	1.2e-123				KT	Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain