ORF_ID e_value Gene_name EC_number CAZy COGs Description
BNMDBFLM_00001 4.5e-26
BNMDBFLM_00002 5.8e-106 L Helix-turn-helix domain
BNMDBFLM_00003 3.9e-84 yslB S Protein of unknown function (DUF2507)
BNMDBFLM_00004 6.1e-54 trxA O Belongs to the thioredoxin family
BNMDBFLM_00005 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
BNMDBFLM_00006 5.7e-310 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
BNMDBFLM_00007 8e-238 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BNMDBFLM_00008 4.6e-41 rpmE2 J Ribosomal protein L31
BNMDBFLM_00009 2.3e-116 frnE Q DSBA-like thioredoxin domain
BNMDBFLM_00010 3.6e-55
BNMDBFLM_00015 2.5e-129 narI 1.7.5.1 C Nitrate reductase
BNMDBFLM_00016 7.9e-100 narJ C nitrate reductase molybdenum cofactor assembly chaperone
BNMDBFLM_00017 1.2e-227 narH 1.7.5.1 C 4Fe-4S dicluster domain
BNMDBFLM_00018 2.1e-39 gcvR T Belongs to the UPF0237 family
BNMDBFLM_00019 6.2e-176 1.1.1.346 C Aldo keto reductase
BNMDBFLM_00020 2.9e-162 K LysR substrate binding domain protein
BNMDBFLM_00021 7.8e-73 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
BNMDBFLM_00022 6.9e-225 G Glycosyl hydrolases family 8
BNMDBFLM_00023 7.1e-172 ydaM M Glycosyl transferase
BNMDBFLM_00024 9.8e-183 ABC-SBP S ABC transporter
BNMDBFLM_00025 1e-78 M PFAM NLP P60 protein
BNMDBFLM_00027 7.8e-14 relB L RelB antitoxin
BNMDBFLM_00028 1.7e-108 S Protein of unknown function (DUF3278)
BNMDBFLM_00030 2.9e-11
BNMDBFLM_00031 4.4e-275 S ABC transporter, ATP-binding protein
BNMDBFLM_00032 1.8e-147 S Putative ABC-transporter type IV
BNMDBFLM_00033 1.5e-106 NU mannosyl-glycoprotein
BNMDBFLM_00034 9.9e-250 brnQ U Component of the transport system for branched-chain amino acids
BNMDBFLM_00035 1.3e-232 S Uncharacterized protein conserved in bacteria (DUF2325)
BNMDBFLM_00036 1.4e-206 nrnB S DHHA1 domain
BNMDBFLM_00037 1.1e-49
BNMDBFLM_00038 2.4e-141 3.6.4.12 S PD-(D/E)XK nuclease family transposase
BNMDBFLM_00039 3.3e-18 S Domain of unknown function (DUF4767)
BNMDBFLM_00040 1.6e-54
BNMDBFLM_00041 6e-123 yrkL S Flavodoxin-like fold
BNMDBFLM_00043 1.4e-65 yeaO S Protein of unknown function, DUF488
BNMDBFLM_00044 5.2e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
BNMDBFLM_00045 1.4e-209 3.1.3.1 S associated with various cellular activities
BNMDBFLM_00046 5.6e-247 S Putative metallopeptidase domain
BNMDBFLM_00047 3.6e-48
BNMDBFLM_00048 0.0 pepO 3.4.24.71 O Peptidase family M13
BNMDBFLM_00049 3.9e-113 K Helix-turn-helix XRE-family like proteins
BNMDBFLM_00050 1.5e-91 ymdB S Macro domain protein
BNMDBFLM_00051 3.9e-199 EGP Major facilitator Superfamily
BNMDBFLM_00052 1e-110 K Bacterial regulatory proteins, tetR family
BNMDBFLM_00053 1.9e-86 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
BNMDBFLM_00054 3.8e-113 coaA 2.7.1.33 F Pantothenic acid kinase
BNMDBFLM_00055 1.7e-226 S cog cog1373
BNMDBFLM_00057 1.1e-302 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
BNMDBFLM_00059 4.2e-49 V DNA modification
BNMDBFLM_00060 1.6e-260 G Major Facilitator Superfamily
BNMDBFLM_00061 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
BNMDBFLM_00062 2.1e-85 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
BNMDBFLM_00063 1.4e-172
BNMDBFLM_00064 0.0
BNMDBFLM_00066 1.1e-33 S Domain of unknown function (DUF3173)
BNMDBFLM_00067 3.8e-237 L Belongs to the 'phage' integrase family
BNMDBFLM_00068 1.3e-224 oxlT P Major Facilitator Superfamily
BNMDBFLM_00069 3.2e-161 spoU 2.1.1.185 J Methyltransferase
BNMDBFLM_00070 1.2e-85 ywlG S Belongs to the UPF0340 family
BNMDBFLM_00071 7.1e-201 EGP Major facilitator Superfamily
BNMDBFLM_00072 4.2e-123 M Lysin motif
BNMDBFLM_00073 7.3e-80
BNMDBFLM_00074 1.9e-97 wecD3 K PFAM GCN5-related N-acetyltransferase
BNMDBFLM_00075 1.4e-212 cytX U Belongs to the purine-cytosine permease (2.A.39) family
BNMDBFLM_00076 3.3e-13
BNMDBFLM_00077 3.4e-82 S Domain of unknown function (DUF4767)
BNMDBFLM_00078 2e-27
BNMDBFLM_00079 2.3e-264 recN L May be involved in recombinational repair of damaged DNA
BNMDBFLM_00080 1e-78 argR K Regulates arginine biosynthesis genes
BNMDBFLM_00081 1.1e-150 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
BNMDBFLM_00082 5.4e-161 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
BNMDBFLM_00083 1.5e-43 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
BNMDBFLM_00084 6.7e-203 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
BNMDBFLM_00085 3.4e-155 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BNMDBFLM_00086 3.6e-70 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BNMDBFLM_00087 2.2e-70 yqhY S Asp23 family, cell envelope-related function
BNMDBFLM_00088 4.5e-123 J 2'-5' RNA ligase superfamily
BNMDBFLM_00089 1.7e-204 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
BNMDBFLM_00090 8.6e-133 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BNMDBFLM_00091 2.1e-45 rpmA J Belongs to the bacterial ribosomal protein bL27 family
BNMDBFLM_00092 7.4e-55 ysxB J Cysteine protease Prp
BNMDBFLM_00093 5.2e-50 rplU J This protein binds to 23S rRNA in the presence of protein L20
BNMDBFLM_00094 2.6e-112 K Transcriptional regulator
BNMDBFLM_00097 6.5e-90 dut S Protein conserved in bacteria
BNMDBFLM_00098 1.8e-187
BNMDBFLM_00099 2.7e-152
BNMDBFLM_00100 1.3e-51 S Iron-sulfur cluster assembly protein
BNMDBFLM_00101 5e-101 msrA 1.8.4.11, 1.8.4.12 C Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BNMDBFLM_00102 1.3e-156 P Belongs to the nlpA lipoprotein family
BNMDBFLM_00103 3.9e-12
BNMDBFLM_00104 1.1e-225 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
BNMDBFLM_00105 4e-297 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BNMDBFLM_00106 6.2e-265 glnA 6.3.1.2 E glutamine synthetase
BNMDBFLM_00107 1e-178 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BNMDBFLM_00108 5.9e-22 S Protein of unknown function (DUF3042)
BNMDBFLM_00109 6.2e-31 feoA P FeoA domain
BNMDBFLM_00110 6.5e-145 sufC O FeS assembly ATPase SufC
BNMDBFLM_00111 5.4e-242 sufD O FeS assembly protein SufD
BNMDBFLM_00112 1.6e-238 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BNMDBFLM_00113 6.5e-81 nifU C SUF system FeS assembly protein, NifU family
BNMDBFLM_00114 4.2e-272 sufB O assembly protein SufB
BNMDBFLM_00115 2.8e-57 yitW S Iron-sulfur cluster assembly protein
BNMDBFLM_00116 1.5e-161 hipB K Helix-turn-helix
BNMDBFLM_00117 1.2e-117 nreC K PFAM regulatory protein LuxR
BNMDBFLM_00118 3.2e-39 S Cytochrome B5
BNMDBFLM_00119 2.9e-156 yitU 3.1.3.104 S hydrolase
BNMDBFLM_00120 2e-266 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
BNMDBFLM_00121 3.4e-147 f42a O Band 7 protein
BNMDBFLM_00122 0.0 lytS 2.7.13.3 T LytS YhcK-type transmembrane receptor domain protein
BNMDBFLM_00123 1.1e-130 lytT K response regulator receiver
BNMDBFLM_00124 1.9e-66 lrgA S LrgA family
BNMDBFLM_00125 2.6e-124 lrgB M LrgB-like family
BNMDBFLM_00126 6.4e-179 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
BNMDBFLM_00127 2.5e-80 scrK 2.7.1.2, 2.7.1.4 GK ROK family
BNMDBFLM_00128 1.4e-80 scrK 2.7.1.2, 2.7.1.4 GK ROK family
BNMDBFLM_00129 6.3e-193 galR K Periplasmic binding protein-like domain
BNMDBFLM_00130 0.0 rafA 3.2.1.22 G alpha-galactosidase
BNMDBFLM_00131 4.6e-117 IQ KR domain
BNMDBFLM_00132 6.6e-134 S membrane transporter protein
BNMDBFLM_00133 1.2e-97 S ABC-type cobalt transport system, permease component
BNMDBFLM_00134 1.6e-260 cbiO1 S ABC transporter, ATP-binding protein
BNMDBFLM_00135 2.6e-115 P Cobalt transport protein
BNMDBFLM_00136 1.6e-52 yvlA
BNMDBFLM_00137 0.0 yjcE P Sodium proton antiporter
BNMDBFLM_00138 2.2e-52 ypaA S Protein of unknown function (DUF1304)
BNMDBFLM_00139 5.8e-168 D Alpha beta
BNMDBFLM_00140 3.8e-72 K Transcriptional regulator
BNMDBFLM_00141 2.6e-163
BNMDBFLM_00142 8.8e-184 1.6.5.5 C Zinc-binding dehydrogenase
BNMDBFLM_00143 3.5e-258 G PTS system Galactitol-specific IIC component
BNMDBFLM_00144 8.2e-213 EGP Major facilitator Superfamily
BNMDBFLM_00145 1.5e-137 V ABC transporter
BNMDBFLM_00146 4.5e-121
BNMDBFLM_00147 5.2e-14
BNMDBFLM_00148 1.9e-63
BNMDBFLM_00149 3.9e-195 lplA 6.3.1.20 H Lipoate-protein ligase
BNMDBFLM_00150 5.1e-81 uspA T universal stress protein
BNMDBFLM_00151 0.0 tetP J elongation factor G
BNMDBFLM_00152 2.1e-168 GK ROK family
BNMDBFLM_00153 1.9e-121 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
BNMDBFLM_00154 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
BNMDBFLM_00155 8.1e-257 malT G Major Facilitator
BNMDBFLM_00156 2.1e-216 phbA 2.3.1.9 I Belongs to the thiolase family
BNMDBFLM_00157 7.1e-175 malR K Transcriptional regulator, LacI family
BNMDBFLM_00158 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
BNMDBFLM_00159 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
BNMDBFLM_00160 2.4e-286 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BNMDBFLM_00161 2.3e-107 wecD3 K PFAM GCN5-related N-acetyltransferase
BNMDBFLM_00163 3.4e-131 yfeJ 6.3.5.2 F glutamine amidotransferase
BNMDBFLM_00164 1.1e-64 yneR
BNMDBFLM_00165 1.6e-114 GM NAD(P)H-binding
BNMDBFLM_00166 2.1e-189 S membrane
BNMDBFLM_00167 1.8e-104 K Transcriptional regulator C-terminal region
BNMDBFLM_00168 2.4e-164 akr5f 1.1.1.346 S reductase
BNMDBFLM_00169 2.8e-157 K Transcriptional regulator
BNMDBFLM_00170 6.1e-185 ansA 3.5.1.1 EJ L-asparaginase, type I
BNMDBFLM_00171 1e-155 ypuA S Protein of unknown function (DUF1002)
BNMDBFLM_00172 1.1e-228 aadAT EK Aminotransferase, class I
BNMDBFLM_00173 3.8e-176 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
BNMDBFLM_00174 9.2e-155 tesE Q hydratase
BNMDBFLM_00175 3.9e-133 S Alpha beta hydrolase
BNMDBFLM_00177 2.6e-89 lacA S transferase hexapeptide repeat
BNMDBFLM_00178 2.1e-160 K Transcriptional regulator
BNMDBFLM_00179 1.2e-88 C Flavodoxin
BNMDBFLM_00180 6.3e-11 S Oxidoreductase, aldo keto reductase family protein
BNMDBFLM_00181 8.6e-56 yphJ 4.1.1.44 S decarboxylase
BNMDBFLM_00182 5.5e-102 M Protein of unknown function (DUF3737)
BNMDBFLM_00183 2.3e-228 4.4.1.8 E Aminotransferase, class I
BNMDBFLM_00184 4.7e-163 mleP3 S Membrane transport protein
BNMDBFLM_00185 4.4e-126 1.1.1.193, 3.5.4.26 H RibD C-terminal domain
BNMDBFLM_00187 1.1e-135 cobQ S CobB/CobQ-like glutamine amidotransferase domain
BNMDBFLM_00188 8.9e-264 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain
BNMDBFLM_00189 6e-108 tdk 2.7.1.21 F thymidine kinase
BNMDBFLM_00190 1.2e-194 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BNMDBFLM_00191 1.4e-169 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
BNMDBFLM_00192 1.2e-196 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
BNMDBFLM_00193 9.8e-233 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BNMDBFLM_00194 6.6e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BNMDBFLM_00195 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BNMDBFLM_00196 3.3e-195 yibE S overlaps another CDS with the same product name
BNMDBFLM_00197 1.8e-131 yibF S overlaps another CDS with the same product name
BNMDBFLM_00198 5.9e-233 pyrP F Permease
BNMDBFLM_00199 7.3e-124 atpB C it plays a direct role in the translocation of protons across the membrane
BNMDBFLM_00200 1.5e-14 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BNMDBFLM_00201 1.1e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BNMDBFLM_00202 5.1e-93 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BNMDBFLM_00203 4e-284 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BNMDBFLM_00204 1.9e-164 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BNMDBFLM_00205 1.1e-267 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BNMDBFLM_00206 3.8e-44 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BNMDBFLM_00207 5.4e-200 L Transposase
BNMDBFLM_00208 3.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
BNMDBFLM_00209 1.5e-118 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BNMDBFLM_00210 5.5e-107 rplD J Forms part of the polypeptide exit tunnel
BNMDBFLM_00211 5.7e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
BNMDBFLM_00212 4.2e-150 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
BNMDBFLM_00213 1.4e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BNMDBFLM_00214 2.8e-52 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BNMDBFLM_00215 6.1e-112 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BNMDBFLM_00216 3.5e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BNMDBFLM_00217 8.4e-28 rpmC J Belongs to the universal ribosomal protein uL29 family
BNMDBFLM_00218 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BNMDBFLM_00219 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BNMDBFLM_00220 2.6e-49 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BNMDBFLM_00221 1.4e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BNMDBFLM_00222 1.3e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BNMDBFLM_00223 3.2e-95 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BNMDBFLM_00224 6.6e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BNMDBFLM_00225 2.2e-85 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BNMDBFLM_00226 2.9e-24 rpmD J Ribosomal protein L30
BNMDBFLM_00227 6.8e-64 rplO J Binds to the 23S rRNA
BNMDBFLM_00228 8.8e-240 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
BNMDBFLM_00229 8.1e-125 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
BNMDBFLM_00230 1.2e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BNMDBFLM_00231 1.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
BNMDBFLM_00232 4.7e-58 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BNMDBFLM_00233 2.3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BNMDBFLM_00234 2.8e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BNMDBFLM_00235 1.1e-62 rplQ J Ribosomal protein L17
BNMDBFLM_00236 1.9e-147 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BNMDBFLM_00237 3.4e-155 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BNMDBFLM_00238 1.2e-141 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BNMDBFLM_00239 6.7e-164 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
BNMDBFLM_00240 0.0 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
BNMDBFLM_00241 1.1e-141 S Belongs to the UPF0246 family
BNMDBFLM_00242 2.5e-138 S Membrane
BNMDBFLM_00243 1.6e-75 4.4.1.5 E Glyoxalase
BNMDBFLM_00244 1e-20
BNMDBFLM_00245 1.7e-87 yueI S Protein of unknown function (DUF1694)
BNMDBFLM_00246 3.4e-244 rarA L recombination factor protein RarA
BNMDBFLM_00247 4.4e-46
BNMDBFLM_00248 4.3e-83 usp6 T universal stress protein
BNMDBFLM_00249 1.5e-208 araR K Transcriptional regulator
BNMDBFLM_00250 2.2e-159 ytbE 1.1.1.346 S Aldo keto reductase
BNMDBFLM_00251 2e-100 maa 2.3.1.79 S Maltose O-acetyltransferase
BNMDBFLM_00252 8.8e-286 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
BNMDBFLM_00253 3.7e-139 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
BNMDBFLM_00254 0.0 araB 2.7.1.12, 2.7.1.16 G carbohydrate kinase FGGY
BNMDBFLM_00255 5.2e-262 araP U Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
BNMDBFLM_00256 1.6e-149 2.3.1.19 K Helix-turn-helix XRE-family like proteins
BNMDBFLM_00257 6.3e-218 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
BNMDBFLM_00258 2.3e-204 U Belongs to the purine-cytosine permease (2.A.39) family
BNMDBFLM_00259 2.1e-243 codA 3.5.4.1 F cytosine deaminase
BNMDBFLM_00260 3.1e-147 tesE Q hydratase
BNMDBFLM_00261 3.6e-114 S (CBS) domain
BNMDBFLM_00262 1.1e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
BNMDBFLM_00263 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BNMDBFLM_00264 1.1e-38 yabO J S4 domain protein
BNMDBFLM_00265 2.3e-57 divIC D Septum formation initiator
BNMDBFLM_00266 9.8e-67 yabR J RNA binding
BNMDBFLM_00267 4.3e-269 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
BNMDBFLM_00268 1.5e-97 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
BNMDBFLM_00269 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BNMDBFLM_00270 3.6e-171 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BNMDBFLM_00271 2.2e-190 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BNMDBFLM_00272 4.2e-294 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
BNMDBFLM_00273 1.7e-88
BNMDBFLM_00274 6.4e-128 F Belongs to the purine-cytosine permease (2.A.39) family
BNMDBFLM_00275 7.9e-168 G Belongs to the carbohydrate kinase PfkB family
BNMDBFLM_00276 5.6e-39 hxlR K regulation of RNA biosynthetic process
BNMDBFLM_00277 3.3e-242 yhjE EGP MFS transporter, metabolite H symporter (MHS) family protein
BNMDBFLM_00278 2.6e-132 IQ Dehydrogenase reductase
BNMDBFLM_00279 4.4e-38
BNMDBFLM_00280 5.7e-115 ywnB S NAD(P)H-binding
BNMDBFLM_00281 1.2e-38 S Cytochrome b5-like Heme/Steroid binding domain
BNMDBFLM_00282 2.3e-257 nhaC C Na H antiporter NhaC
BNMDBFLM_00283 1.7e-108 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BNMDBFLM_00284 1.9e-50 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BNMDBFLM_00286 5.5e-103 ydeN S Serine hydrolase
BNMDBFLM_00287 2e-62 psiE S Phosphate-starvation-inducible E
BNMDBFLM_00288 2.9e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
BNMDBFLM_00290 2.1e-182 S Aldo keto reductase
BNMDBFLM_00291 4.4e-75 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I PAP2 superfamily
BNMDBFLM_00292 0.0 L Helicase C-terminal domain protein
BNMDBFLM_00294 1.8e-256 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
BNMDBFLM_00295 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BNMDBFLM_00296 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BNMDBFLM_00297 4.9e-165 S Tetratricopeptide repeat
BNMDBFLM_00298 3.8e-226 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BNMDBFLM_00299 1.1e-237 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
BNMDBFLM_00300 6.2e-235 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BNMDBFLM_00301 3.6e-108 engB D Necessary for normal cell division and for the maintenance of normal septation
BNMDBFLM_00302 6.1e-60 MA20_27270 S mazG nucleotide pyrophosphohydrolase
BNMDBFLM_00303 7.6e-09
BNMDBFLM_00304 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
BNMDBFLM_00305 1.2e-249 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BNMDBFLM_00306 9.8e-177 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
BNMDBFLM_00307 2e-157 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
BNMDBFLM_00308 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
BNMDBFLM_00309 9.2e-92 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BNMDBFLM_00310 2.5e-88
BNMDBFLM_00311 6.2e-10 L Belongs to the 'phage' integrase family
BNMDBFLM_00312 2.2e-182 S YSIRK type signal peptide
BNMDBFLM_00313 2.8e-122 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
BNMDBFLM_00314 1.7e-221 ecsB U ABC transporter
BNMDBFLM_00315 1e-136 ecsA V ABC transporter, ATP-binding protein
BNMDBFLM_00316 8.3e-78 hit FG histidine triad
BNMDBFLM_00318 1.2e-129 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
BNMDBFLM_00319 0.0 L AAA domain
BNMDBFLM_00320 1.8e-104 L AAA domain
BNMDBFLM_00321 1.3e-229 yhaO L Ser Thr phosphatase family protein
BNMDBFLM_00322 2.6e-40 yheA S Belongs to the UPF0342 family
BNMDBFLM_00323 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
BNMDBFLM_00324 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
BNMDBFLM_00325 7.3e-152 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
BNMDBFLM_00326 8.4e-168 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
BNMDBFLM_00327 3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
BNMDBFLM_00328 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BNMDBFLM_00329 3.4e-97 nusG K Participates in transcription elongation, termination and antitermination
BNMDBFLM_00330 1.4e-15 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
BNMDBFLM_00331 1.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
BNMDBFLM_00332 4.7e-137 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BNMDBFLM_00333 2.5e-71 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
BNMDBFLM_00334 2.6e-274 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
BNMDBFLM_00335 1e-207 yacL S domain protein
BNMDBFLM_00336 3.2e-256 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BNMDBFLM_00337 2.4e-49 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
BNMDBFLM_00338 8.1e-10 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
BNMDBFLM_00339 8.5e-50 HA62_12640 S GCN5-related N-acetyl-transferase
BNMDBFLM_00340 2.6e-126 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
BNMDBFLM_00341 4.5e-224 pepC 3.4.22.40 E Peptidase C1-like family
BNMDBFLM_00342 1.5e-141 tcyA ET Belongs to the bacterial solute-binding protein 3 family
BNMDBFLM_00343 2.6e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
BNMDBFLM_00344 1.1e-119 tcyB E ABC transporter
BNMDBFLM_00345 5.9e-216 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
BNMDBFLM_00346 6.3e-170 I alpha/beta hydrolase fold
BNMDBFLM_00347 1.2e-134 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BNMDBFLM_00348 3.8e-31 S Bacterial membrane protein, YfhO
BNMDBFLM_00349 1.9e-245 yifK E Amino acid permease
BNMDBFLM_00350 5.6e-294 clcA P chloride
BNMDBFLM_00351 1.8e-34 secG U Preprotein translocase
BNMDBFLM_00352 2.1e-148 est 3.1.1.1 S Serine aminopeptidase, S33
BNMDBFLM_00353 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
BNMDBFLM_00354 1.4e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
BNMDBFLM_00355 6.3e-105 yxjI
BNMDBFLM_00356 6.2e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BNMDBFLM_00357 3.8e-179 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
BNMDBFLM_00358 5.9e-82 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
BNMDBFLM_00359 6.1e-88 K Acetyltransferase (GNAT) domain
BNMDBFLM_00360 8.9e-77 S PAS domain
BNMDBFLM_00361 9.3e-103 dnaQ 2.7.7.7 L DNA polymerase III
BNMDBFLM_00362 7.3e-169 murB 1.3.1.98 M Cell wall formation
BNMDBFLM_00363 7.7e-166 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BNMDBFLM_00364 6e-67 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
BNMDBFLM_00365 3.7e-249 fucP G Major Facilitator Superfamily
BNMDBFLM_00366 5e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BNMDBFLM_00367 8.2e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
BNMDBFLM_00368 2.8e-266 glnPH2 P ABC transporter permease
BNMDBFLM_00369 1.2e-23 rpsU J Belongs to the bacterial ribosomal protein bS21 family
BNMDBFLM_00370 2.9e-70 yqeY S YqeY-like protein
BNMDBFLM_00371 1.7e-187 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
BNMDBFLM_00372 9.1e-239 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
BNMDBFLM_00373 1.7e-265 argH 4.3.2.1 E argininosuccinate lyase
BNMDBFLM_00374 4.6e-92 bioY S BioY family
BNMDBFLM_00375 2.4e-181 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
BNMDBFLM_00376 7.6e-183 phoH T phosphate starvation-inducible protein PhoH
BNMDBFLM_00377 1.9e-83 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BNMDBFLM_00378 1.5e-62 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
BNMDBFLM_00379 5.1e-170 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BNMDBFLM_00380 2.3e-147 recO L Involved in DNA repair and RecF pathway recombination
BNMDBFLM_00381 2.3e-86 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
BNMDBFLM_00382 1.3e-31 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
BNMDBFLM_00383 1.7e-24 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
BNMDBFLM_00384 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
BNMDBFLM_00385 3e-209 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
BNMDBFLM_00386 5.6e-103 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
BNMDBFLM_00387 3.6e-82
BNMDBFLM_00388 9.8e-32 ykzG S Belongs to the UPF0356 family
BNMDBFLM_00389 3.8e-184 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic
BNMDBFLM_00390 5.7e-29
BNMDBFLM_00391 1.3e-143 mltD CBM50 M NlpC P60 family protein
BNMDBFLM_00393 7.7e-58
BNMDBFLM_00394 1.5e-211 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
BNMDBFLM_00395 5.9e-220 EG GntP family permease
BNMDBFLM_00396 2.9e-27 KT Putative sugar diacid recognition
BNMDBFLM_00397 1.4e-32 KT Putative sugar diacid recognition
BNMDBFLM_00398 6.1e-199 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BNMDBFLM_00399 2.6e-222 patA 2.6.1.1 E Aminotransferase
BNMDBFLM_00400 2.3e-142 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
BNMDBFLM_00401 1.6e-174 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BNMDBFLM_00402 7e-225 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
BNMDBFLM_00403 1.7e-34 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
BNMDBFLM_00404 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BNMDBFLM_00405 1.7e-233 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
BNMDBFLM_00406 3.2e-183 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
BNMDBFLM_00407 1.5e-29 yajC U Preprotein translocase
BNMDBFLM_00408 2.2e-204 tgt_1 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
BNMDBFLM_00409 1.2e-191 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
BNMDBFLM_00410 1.8e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
BNMDBFLM_00411 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BNMDBFLM_00412 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BNMDBFLM_00413 9.5e-209 rny S Endoribonuclease that initiates mRNA decay
BNMDBFLM_00414 1.7e-102 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BNMDBFLM_00415 1.2e-246 purD 6.3.4.13 F Belongs to the GARS family
BNMDBFLM_00416 2.2e-298 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
BNMDBFLM_00417 1.6e-105 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BNMDBFLM_00418 6.6e-198 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
BNMDBFLM_00419 1.1e-278 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BNMDBFLM_00420 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BNMDBFLM_00421 4.3e-129 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BNMDBFLM_00422 1.8e-37 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BNMDBFLM_00423 6.1e-134 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
BNMDBFLM_00424 1.1e-253 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BNMDBFLM_00425 7.8e-216 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BNMDBFLM_00426 1.1e-83 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BNMDBFLM_00427 3.5e-134 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
BNMDBFLM_00428 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
BNMDBFLM_00429 4.2e-77 XK27_00915 C Luciferase-like monooxygenase
BNMDBFLM_00430 1.1e-156 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
BNMDBFLM_00431 5.6e-69 S Protein of unknown function (DUF3021)
BNMDBFLM_00432 2.9e-78 K LytTr DNA-binding domain
BNMDBFLM_00433 2.5e-97 K Acetyltransferase (GNAT) family
BNMDBFLM_00434 3.7e-22
BNMDBFLM_00435 7.6e-121 ybhL S Belongs to the BI1 family
BNMDBFLM_00436 2.2e-81 yjcF 3.5.4.33, 4.4.1.8 K protein acetylation
BNMDBFLM_00437 6.3e-201 S Protein of unknown function (DUF3114)
BNMDBFLM_00438 1.3e-298 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
BNMDBFLM_00439 2.7e-166 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
BNMDBFLM_00440 1.3e-110 yvdD 3.2.2.10 S Belongs to the LOG family
BNMDBFLM_00441 7e-62 S Domain of unknown function (DUF4828)
BNMDBFLM_00442 1.2e-191 mocA S Oxidoreductase
BNMDBFLM_00443 3.6e-233 yfmL 3.6.4.13 L DEAD DEAH box helicase
BNMDBFLM_00445 3.3e-211 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
BNMDBFLM_00446 3.6e-54
BNMDBFLM_00447 1.5e-74 gtcA S Teichoic acid glycosylation protein
BNMDBFLM_00448 7.9e-45 moeB 2.7.7.73, 2.7.7.80 H ThiF family
BNMDBFLM_00449 3.1e-84 moaB 2.7.7.75 H May be involved in the biosynthesis of molybdopterin
BNMDBFLM_00450 3.2e-228 moeA 2.10.1.1 H MoeA N-terminal region (domain I and II)
BNMDBFLM_00451 7.9e-85 mobB 2.10.1.1, 2.7.7.77 H molybdopterin-guanine dinucleotide biosynthesis protein
BNMDBFLM_00452 4.7e-105 mobA 2.7.7.77 H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
BNMDBFLM_00453 5.1e-44
BNMDBFLM_00454 5.1e-190 comP 2.7.13.3 F Sensor histidine kinase
BNMDBFLM_00455 2.6e-115 nreC K PFAM regulatory protein LuxR
BNMDBFLM_00456 1.6e-18
BNMDBFLM_00457 1.4e-181
BNMDBFLM_00458 1.7e-165 hepT 2.5.1.30, 2.5.1.90 H geranyltranstransferase activity
BNMDBFLM_00459 3.9e-218 narK P Transporter, major facilitator family protein
BNMDBFLM_00460 4.9e-35 moaD 2.8.1.12 H ThiS family
BNMDBFLM_00461 3.7e-64 moaE 2.8.1.12 H MoaE protein
BNMDBFLM_00462 3.6e-76 S Flavodoxin
BNMDBFLM_00463 1.8e-128 fecD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BNMDBFLM_00464 6.3e-137 fecE 3.6.3.34 HP AAA domain, putative AbiEii toxin, Type IV TA system
BNMDBFLM_00465 8.5e-174 fecB P Periplasmic binding protein
BNMDBFLM_00466 1.7e-122 L PFAM Integrase catalytic region
BNMDBFLM_00467 2.6e-103 comFC S Competence protein
BNMDBFLM_00468 4.5e-97 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BNMDBFLM_00469 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
BNMDBFLM_00470 9.2e-189 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BNMDBFLM_00471 2.4e-32 KT PspC domain protein
BNMDBFLM_00472 4.9e-52 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
BNMDBFLM_00473 4.6e-177 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
BNMDBFLM_00474 1.3e-159 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BNMDBFLM_00475 2.4e-184 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
BNMDBFLM_00476 1.1e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
BNMDBFLM_00477 2.4e-138 yrjD S LUD domain
BNMDBFLM_00478 4.4e-296 lutB C 4Fe-4S dicluster domain
BNMDBFLM_00479 1.9e-169 lutA C Cysteine-rich domain
BNMDBFLM_00480 1.4e-10 3.4.21.88 K Peptidase S24-like
BNMDBFLM_00481 1e-81
BNMDBFLM_00482 4.7e-76
BNMDBFLM_00483 6.4e-13
BNMDBFLM_00484 8.1e-142
BNMDBFLM_00485 5.4e-225 3.6.4.12 L Belongs to the 'phage' integrase family
BNMDBFLM_00486 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
BNMDBFLM_00487 5.1e-199 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
BNMDBFLM_00488 0.0 dnaK O Heat shock 70 kDa protein
BNMDBFLM_00489 1.2e-76 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BNMDBFLM_00490 1.1e-195 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
BNMDBFLM_00491 2e-64
BNMDBFLM_00492 1.9e-180 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
BNMDBFLM_00493 1.2e-168 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BNMDBFLM_00494 1.1e-186 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BNMDBFLM_00495 3.2e-150 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
BNMDBFLM_00496 2.9e-254 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
BNMDBFLM_00497 5.3e-226 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BNMDBFLM_00498 1.2e-70 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
BNMDBFLM_00499 8.3e-41 yggT S YGGT family
BNMDBFLM_00500 1.3e-145 ylmH S S4 domain protein
BNMDBFLM_00501 6.4e-38 divIVA D DivIVA domain protein
BNMDBFLM_00502 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BNMDBFLM_00503 4.2e-32 cspA K Cold shock protein
BNMDBFLM_00504 1.1e-98 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
BNMDBFLM_00506 1e-125 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BNMDBFLM_00507 4.4e-219 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
BNMDBFLM_00508 2.6e-219 clcA P chloride
BNMDBFLM_00509 2e-79 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
BNMDBFLM_00510 5.8e-104 proW P ABC transporter, permease protein
BNMDBFLM_00511 1.3e-142 proV E ABC transporter, ATP-binding protein
BNMDBFLM_00512 9.7e-110 proWZ P ABC transporter permease
BNMDBFLM_00513 7e-164 proX M ABC transporter, substrate-binding protein, QAT family
BNMDBFLM_00514 2e-74 K Transcriptional regulator
BNMDBFLM_00515 1.3e-96 1.6.5.2 GM NAD(P)H-binding
BNMDBFLM_00516 5e-37 1.6.5.2 GM NAD(P)H-binding
BNMDBFLM_00518 3.1e-228 5.4.2.7 G Metalloenzyme superfamily
BNMDBFLM_00519 0.0 cadA P P-type ATPase
BNMDBFLM_00520 6.4e-131 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
BNMDBFLM_00521 1.1e-83
BNMDBFLM_00522 6.8e-159 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
BNMDBFLM_00523 1.3e-144 XK27_00940 1.2.1.70, 3.5.1.9 S Putative cyclase
BNMDBFLM_00524 7.7e-224 yxjG_1 E methionine synthase, vitamin-B12 independent
BNMDBFLM_00525 2.8e-131 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
BNMDBFLM_00526 8.2e-224 mdtG EGP Major facilitator Superfamily
BNMDBFLM_00527 1.2e-168 T Calcineurin-like phosphoesterase superfamily domain
BNMDBFLM_00528 7e-43 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BNMDBFLM_00531 1.2e-123 sdaAB 4.3.1.17 E Serine dehydratase beta chain
BNMDBFLM_00532 3e-143 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
BNMDBFLM_00533 1.2e-105 ahpC 1.11.1.15 O Peroxiredoxin
BNMDBFLM_00534 0.0 trxB2 1.8.1.9 C Thioredoxin domain
BNMDBFLM_00541 1.2e-274 S Phage plasmid primase, P4
BNMDBFLM_00542 5e-12 S head-tail joining protein
BNMDBFLM_00544 1.2e-85 L HNH nucleases
BNMDBFLM_00546 2.1e-79 terS L Phage terminase, small subunit
BNMDBFLM_00547 0.0 terL S overlaps another CDS with the same product name
BNMDBFLM_00549 3.4e-208 S Phage portal protein
BNMDBFLM_00550 2.3e-284 S Caudovirus prohead serine protease
BNMDBFLM_00551 1.5e-76 S Transcriptional regulator, RinA family
BNMDBFLM_00552 7.8e-45 S Phage gp6-like head-tail connector protein
BNMDBFLM_00553 1.2e-35 yozE S Belongs to the UPF0346 family
BNMDBFLM_00554 7.4e-109 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
BNMDBFLM_00555 3.3e-172 ypmR E lipolytic protein G-D-S-L family
BNMDBFLM_00556 8.1e-154 DegV S EDD domain protein, DegV family
BNMDBFLM_00557 5.3e-113 hlyIII S protein, hemolysin III
BNMDBFLM_00558 5.1e-92 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BNMDBFLM_00559 5.9e-193 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BNMDBFLM_00560 0.0 yfmR S ABC transporter, ATP-binding protein
BNMDBFLM_00561 2.3e-226 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
BNMDBFLM_00562 3.9e-237 S Tetratricopeptide repeat protein
BNMDBFLM_00563 2.6e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
BNMDBFLM_00564 7.2e-250 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
BNMDBFLM_00565 5.6e-35 rpsA 1.17.7.4 J Ribosomal protein S1
BNMDBFLM_00566 9.1e-181 yhdP S Transporter associated domain
BNMDBFLM_00567 9.9e-85 nrdI F Belongs to the NrdI family
BNMDBFLM_00568 1.3e-72 S 3-demethylubiquinone-9 3-methyltransferase
BNMDBFLM_00569 3.6e-194 yeaN P Transporter, major facilitator family protein
BNMDBFLM_00570 5.7e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BNMDBFLM_00571 1.4e-275 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BNMDBFLM_00572 1.1e-40
BNMDBFLM_00573 0.0 lacS G Transporter
BNMDBFLM_00574 1.5e-80 uspA T universal stress protein
BNMDBFLM_00575 1.5e-80 K AsnC family
BNMDBFLM_00576 1e-232 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
BNMDBFLM_00577 0.0 I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BNMDBFLM_00578 7.7e-160 endA V DNA/RNA non-specific endonuclease
BNMDBFLM_00579 3.5e-255 yifK E Amino acid permease
BNMDBFLM_00581 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BNMDBFLM_00582 2e-233 N Uncharacterized conserved protein (DUF2075)
BNMDBFLM_00583 6.1e-123 S SNARE associated Golgi protein
BNMDBFLM_00584 2.6e-280 uvrA3 L excinuclease ABC, A subunit
BNMDBFLM_00585 1.5e-183 glk 2.7.1.2 G Glucokinase
BNMDBFLM_00586 7.4e-36 yqgQ S Bacterial protein of unknown function (DUF910)
BNMDBFLM_00587 2.2e-114 gluP 3.4.21.105 S Peptidase, S54 family
BNMDBFLM_00588 1.4e-101 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BNMDBFLM_00589 4.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
BNMDBFLM_00590 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
BNMDBFLM_00591 0.0 S membrane
BNMDBFLM_00592 4e-71 yneR S Belongs to the HesB IscA family
BNMDBFLM_00593 5.3e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
BNMDBFLM_00594 3.3e-118 udk 2.7.1.48 F Cytidine monophosphokinase
BNMDBFLM_00595 6.9e-113 rlpA M PFAM NLP P60 protein
BNMDBFLM_00596 7.7e-140 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
BNMDBFLM_00597 2.9e-176 S Bacterial membrane protein, YfhO
BNMDBFLM_00598 7.5e-188 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
BNMDBFLM_00599 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
BNMDBFLM_00601 8.6e-86 ydcK S Belongs to the SprT family
BNMDBFLM_00602 0.0 yhgF K Tex-like protein N-terminal domain protein
BNMDBFLM_00603 3.9e-153 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
BNMDBFLM_00604 1.1e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BNMDBFLM_00605 1.8e-127 gntR1 K UbiC transcription regulator-associated domain protein
BNMDBFLM_00606 2.5e-132 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
BNMDBFLM_00607 9e-119 aspT P Predicted Permease Membrane Region
BNMDBFLM_00608 1e-289 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
BNMDBFLM_00609 1.2e-227 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
BNMDBFLM_00610 2.2e-187 celE 3.2.1.4 GH5,GH9 E GDSL-like Lipase/Acylhydrolase family
BNMDBFLM_00611 1.4e-147 ptp3 3.1.3.48 T Tyrosine phosphatase family
BNMDBFLM_00612 4.3e-94 yxkA S Phosphatidylethanolamine-binding protein
BNMDBFLM_00613 9.1e-36
BNMDBFLM_00614 9.1e-53
BNMDBFLM_00615 4.6e-205
BNMDBFLM_00616 1.5e-83 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
BNMDBFLM_00617 1.8e-136 pnuC H nicotinamide mononucleotide transporter
BNMDBFLM_00618 9.9e-160 ytbE 1.1.1.346 S Aldo keto reductase
BNMDBFLM_00619 1.5e-132 K response regulator
BNMDBFLM_00620 4.2e-259 EGP Major facilitator Superfamily
BNMDBFLM_00621 4.3e-85 perR P Belongs to the Fur family
BNMDBFLM_00622 2.2e-233 cycA E Amino acid permease
BNMDBFLM_00623 2.6e-103 V VanZ like family
BNMDBFLM_00624 1e-23
BNMDBFLM_00625 2.2e-85 S Short repeat of unknown function (DUF308)
BNMDBFLM_00626 1.5e-79 S Psort location Cytoplasmic, score
BNMDBFLM_00627 1.9e-286 dinB 2.7.7.7 L impB/mucB/samB family C-terminal domain
BNMDBFLM_00628 2.4e-77 hsp O Belongs to the small heat shock protein (HSP20) family
BNMDBFLM_00629 1e-156 yeaE S Aldo keto
BNMDBFLM_00630 4e-237 preA 1.3.1.1 C 4Fe-4S dicluster domain
BNMDBFLM_00631 7.3e-236 preT 1.3.1.1 E Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
BNMDBFLM_00632 6.3e-114 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
BNMDBFLM_00634 1.1e-43 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BNMDBFLM_00635 1.9e-292 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
BNMDBFLM_00636 4.2e-86 S Aminoacyl-tRNA editing domain
BNMDBFLM_00637 4.3e-305 ybeC E amino acid
BNMDBFLM_00638 0.0 ydaO E amino acid
BNMDBFLM_00639 9.2e-40
BNMDBFLM_00640 3.3e-68 rmaI K Transcriptional regulator
BNMDBFLM_00641 1.3e-249 EGP Major facilitator Superfamily
BNMDBFLM_00642 2e-112 yvyE 3.4.13.9 S YigZ family
BNMDBFLM_00643 2.3e-259 comFA L Helicase C-terminal domain protein
BNMDBFLM_00644 4.7e-157 ypdB V (ABC) transporter
BNMDBFLM_00645 7.2e-92 1.14.14.47, 1.6.5.3, 1.6.99.3 GM epimerase
BNMDBFLM_00646 6.1e-91 M1-874 K Domain of unknown function (DUF1836)
BNMDBFLM_00647 1.7e-78 yybA 2.3.1.57 K Transcriptional regulator
BNMDBFLM_00648 4.2e-135 XK27_07210 6.1.1.6 S B3 4 domain
BNMDBFLM_00649 1.8e-177 S AI-2E family transporter
BNMDBFLM_00650 3e-164 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
BNMDBFLM_00651 9e-167
BNMDBFLM_00652 5.4e-135 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
BNMDBFLM_00653 4.1e-150 eutJ E Hsp70 protein
BNMDBFLM_00654 3e-201 K helix_turn_helix, arabinose operon control protein
BNMDBFLM_00655 6.2e-42 pduA_4 CQ BMC
BNMDBFLM_00656 2.7e-134 pduB E BMC
BNMDBFLM_00657 6.5e-254 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
BNMDBFLM_00658 1.5e-272 cydA 1.10.3.14 C ubiquinol oxidase
BNMDBFLM_00659 3.3e-186 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
BNMDBFLM_00660 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
BNMDBFLM_00661 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BNMDBFLM_00662 4.8e-232 ndh 1.6.99.3 C NADH dehydrogenase
BNMDBFLM_00663 9.4e-250 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
BNMDBFLM_00664 2.9e-45 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
BNMDBFLM_00665 0.0 typA T GTP-binding protein TypA
BNMDBFLM_00666 5.9e-222 ftsW D Belongs to the SEDS family
BNMDBFLM_00667 1e-44 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
BNMDBFLM_00668 3.8e-99 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
BNMDBFLM_00669 5.1e-90 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BNMDBFLM_00670 7.1e-200 ylbL T Belongs to the peptidase S16 family
BNMDBFLM_00671 8.1e-82 comEA L Competence protein ComEA
BNMDBFLM_00672 3.1e-89 comEB 3.5.4.12 F ComE operon protein 2
BNMDBFLM_00673 0.0 comEC S Competence protein ComEC
BNMDBFLM_00674 2.5e-149 holA 2.7.7.7 L DNA polymerase III delta subunit
BNMDBFLM_00675 5.1e-35 rpsT J Binds directly to 16S ribosomal RNA
BNMDBFLM_00676 3.6e-64 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
BNMDBFLM_00677 6.8e-262 yfnA E amino acid
BNMDBFLM_00678 9.9e-143 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
BNMDBFLM_00679 3.1e-92 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BNMDBFLM_00680 4.1e-40 ylqC S Belongs to the UPF0109 family
BNMDBFLM_00681 2.2e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
BNMDBFLM_00682 2.7e-250 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BNMDBFLM_00683 1.3e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
BNMDBFLM_00684 2.2e-181 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
BNMDBFLM_00685 0.0 smc D Required for chromosome condensation and partitioning
BNMDBFLM_00689 1.1e-101 2.3.1.128 K Acetyltransferase (GNAT) domain
BNMDBFLM_00690 4.2e-240 lmrB EGP Major facilitator Superfamily
BNMDBFLM_00691 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
BNMDBFLM_00692 9e-112 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BNMDBFLM_00693 1.1e-166 sufD O Uncharacterized protein family (UPF0051)
BNMDBFLM_00694 6.8e-43 lytE M LysM domain protein
BNMDBFLM_00695 0.0 oppD EP Psort location Cytoplasmic, score
BNMDBFLM_00696 1.9e-95 lytE M LysM domain protein
BNMDBFLM_00697 4.5e-143 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BNMDBFLM_00698 3.4e-138 cdsA 2.7.7.41 I Belongs to the CDS family
BNMDBFLM_00699 9.8e-236 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
BNMDBFLM_00700 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
BNMDBFLM_00701 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BNMDBFLM_00702 1.4e-83 rimP J Required for maturation of 30S ribosomal subunits
BNMDBFLM_00703 7.2e-261 lysC 2.7.2.4 E Belongs to the aspartokinase family
BNMDBFLM_00704 2.7e-188 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
BNMDBFLM_00705 2.8e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BNMDBFLM_00706 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
BNMDBFLM_00707 3.4e-118 S Repeat protein
BNMDBFLM_00708 3.4e-123 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
BNMDBFLM_00709 1.8e-225 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
BNMDBFLM_00710 7.5e-58 XK27_04120 S Putative amino acid metabolism
BNMDBFLM_00711 1.9e-86 uspA T Belongs to the universal stress protein A family
BNMDBFLM_00712 8.7e-278 pepV 3.5.1.18 E dipeptidase PepV
BNMDBFLM_00713 1.2e-155 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
BNMDBFLM_00714 6.4e-304 ytgP S Polysaccharide biosynthesis protein
BNMDBFLM_00715 4.5e-42
BNMDBFLM_00716 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
BNMDBFLM_00717 1.9e-217 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BNMDBFLM_00718 2.5e-100 tag 3.2.2.20 L glycosylase
BNMDBFLM_00719 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
BNMDBFLM_00720 1.4e-162 EG EamA-like transporter family
BNMDBFLM_00721 5.1e-125 dnaD L DnaD domain protein
BNMDBFLM_00722 1.8e-87 ypmB S Protein conserved in bacteria
BNMDBFLM_00723 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
BNMDBFLM_00724 2.1e-174 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
BNMDBFLM_00725 4.6e-177 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
BNMDBFLM_00726 7.7e-44 S Putative peptidoglycan binding domain
BNMDBFLM_00727 9.9e-112 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
BNMDBFLM_00728 2.4e-89
BNMDBFLM_00729 5.2e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
BNMDBFLM_00730 5.1e-218 yttB EGP Major facilitator Superfamily
BNMDBFLM_00731 4.3e-104
BNMDBFLM_00732 1e-24
BNMDBFLM_00733 5.5e-175 scrR K Transcriptional regulator, LacI family
BNMDBFLM_00734 2.5e-255 acm2 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
BNMDBFLM_00735 3.9e-40 czrA K Transcriptional regulator, ArsR family
BNMDBFLM_00736 2.1e-38
BNMDBFLM_00737 1.4e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
BNMDBFLM_00738 1.5e-152 glnH ET ABC transporter
BNMDBFLM_00739 2.4e-110 gluC P ABC transporter permease
BNMDBFLM_00740 3.6e-109 glnP P ABC transporter permease
BNMDBFLM_00741 8.3e-221 S CAAX protease self-immunity
BNMDBFLM_00742 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BNMDBFLM_00743 2.9e-57
BNMDBFLM_00744 2.6e-74 merR K MerR HTH family regulatory protein
BNMDBFLM_00745 7.2e-270 lmrB EGP Major facilitator Superfamily
BNMDBFLM_00746 5.8e-124 S Domain of unknown function (DUF4811)
BNMDBFLM_00747 1.1e-158 cylA V ABC transporter
BNMDBFLM_00748 5.7e-52
BNMDBFLM_00749 0.0 XK27_08510 L Type III restriction protein res subunit
BNMDBFLM_00750 1.7e-102 S PFAM Archaeal ATPase
BNMDBFLM_00751 7.9e-70 S PFAM Archaeal ATPase
BNMDBFLM_00752 4.4e-49 3.6.4.12 S PD-(D/E)XK nuclease family transposase
BNMDBFLM_00753 2.3e-207 amtB P ammonium transporter
BNMDBFLM_00754 3e-256 gor 1.8.1.7 C pyridine nucleotide-disulfide oxidoreductase
BNMDBFLM_00755 9.1e-234
BNMDBFLM_00756 6.2e-84 K Transcriptional regulator, HxlR family
BNMDBFLM_00757 6.7e-110 XK27_02070 S Nitroreductase family
BNMDBFLM_00758 2.5e-52 hxlR K Transcriptional regulator, HxlR family
BNMDBFLM_00759 1.4e-121 GM NmrA-like family
BNMDBFLM_00760 2.4e-77 elaA S Gnat family
BNMDBFLM_00761 1.8e-39 S Cytochrome B5
BNMDBFLM_00762 5.4e-09 S Cytochrome B5
BNMDBFLM_00763 1.6e-41 S Cytochrome B5
BNMDBFLM_00764 4.2e-222 yxjG_1 E methionine synthase, vitamin-B12 independent
BNMDBFLM_00765 4.2e-15 S Protein of unknown function (DUF3278)
BNMDBFLM_00766 3.5e-28 WQ51_00220 K Helix-turn-helix XRE-family like proteins
BNMDBFLM_00768 3.2e-183 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BNMDBFLM_00769 4.4e-161 E amino acid
BNMDBFLM_00770 1.6e-105 ypsA S Belongs to the UPF0398 family
BNMDBFLM_00771 1.7e-44 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
BNMDBFLM_00772 7.7e-85 F Belongs to the NrdI family
BNMDBFLM_00773 1.2e-232 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
BNMDBFLM_00774 6.9e-71 rnhA 3.1.26.4 L Ribonuclease HI
BNMDBFLM_00775 1.5e-65 esbA S Family of unknown function (DUF5322)
BNMDBFLM_00776 1.3e-73 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BNMDBFLM_00777 4.8e-176 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
BNMDBFLM_00778 1.5e-208 carA 6.3.5.5 F Belongs to the CarA family
BNMDBFLM_00779 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
BNMDBFLM_00780 3.9e-173 ppaC 3.6.1.1 C inorganic pyrophosphatase
BNMDBFLM_00781 8.9e-86 F NUDIX domain
BNMDBFLM_00782 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
BNMDBFLM_00783 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
BNMDBFLM_00784 1.5e-107 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
BNMDBFLM_00785 1.2e-171 lacX 5.1.3.3 G Aldose 1-epimerase
BNMDBFLM_00786 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BNMDBFLM_00787 2.3e-300 L PFAM plasmid pRiA4b ORF-3 family protein
BNMDBFLM_00788 2.7e-207 adhA 1.1.1.1 C Zinc-binding alcohol dehydrogenase family protein
BNMDBFLM_00789 7.8e-111 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BNMDBFLM_00790 2.5e-161 mleR K LysR family
BNMDBFLM_00791 2e-310 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
BNMDBFLM_00792 1e-87 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
BNMDBFLM_00793 6.6e-159 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
BNMDBFLM_00794 5.6e-269 frdC 1.3.5.4 C FAD binding domain
BNMDBFLM_00795 9.6e-121 devA 3.6.3.25 V ABC transporter, ATP-binding protein
BNMDBFLM_00796 4e-174 hrtB V ABC transporter permease
BNMDBFLM_00797 1.9e-89 ygfC K transcriptional regulator (TetR family)
BNMDBFLM_00798 1.3e-190 tdh 1.1.1.14 E Alcohol dehydrogenase GroES-like domain
BNMDBFLM_00799 1e-290 mntH P H( )-stimulated, divalent metal cation uptake system
BNMDBFLM_00800 5.5e-36
BNMDBFLM_00801 2.3e-198 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BNMDBFLM_00802 2.6e-58 yodB K Transcriptional regulator, HxlR family
BNMDBFLM_00803 3.1e-92 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
BNMDBFLM_00804 2.2e-145 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BNMDBFLM_00805 8.2e-47 acyP 3.6.1.7 C Belongs to the acylphosphatase family
BNMDBFLM_00806 1.5e-169 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BNMDBFLM_00807 9.3e-71 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
BNMDBFLM_00808 7.8e-236 V MatE
BNMDBFLM_00809 6.4e-260 yjeM E Amino Acid
BNMDBFLM_00810 1.5e-222 patA 2.6.1.1 E Aminotransferase
BNMDBFLM_00811 3.2e-181 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BNMDBFLM_00812 5e-75 osmC O OsmC-like protein
BNMDBFLM_00813 1.3e-28 2.7.13.3 T GHKL domain
BNMDBFLM_00816 2.5e-269 S Putative peptidoglycan binding domain
BNMDBFLM_00817 2.5e-20
BNMDBFLM_00819 2.8e-219 bacI V MacB-like periplasmic core domain
BNMDBFLM_00820 2e-129 V ABC transporter
BNMDBFLM_00821 1.4e-145 bacG M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BNMDBFLM_00822 1.4e-77 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
BNMDBFLM_00823 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BNMDBFLM_00824 9.3e-53
BNMDBFLM_00825 1.3e-131 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
BNMDBFLM_00826 1.6e-182 prmA J Ribosomal protein L11 methyltransferase
BNMDBFLM_00827 7.5e-58
BNMDBFLM_00829 8e-174 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
BNMDBFLM_00830 1.1e-138 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
BNMDBFLM_00831 5.2e-50 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
BNMDBFLM_00832 1.8e-239 pipD E Dipeptidase
BNMDBFLM_00833 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BNMDBFLM_00834 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
BNMDBFLM_00835 9.4e-214 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
BNMDBFLM_00836 3.9e-99 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
BNMDBFLM_00837 3.6e-114 acmC 3.2.1.96 NU mannosyl-glycoprotein
BNMDBFLM_00838 5.5e-141 IQ reductase
BNMDBFLM_00839 5.6e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
BNMDBFLM_00840 9.1e-80 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BNMDBFLM_00841 1.9e-242 pbuX F xanthine permease
BNMDBFLM_00842 1.9e-248 nhaC C Na H antiporter NhaC
BNMDBFLM_00843 7.1e-250 hisS 6.1.1.21 J histidyl-tRNA synthetase
BNMDBFLM_00844 2.5e-97 S Family of unknown function (DUF5449)
BNMDBFLM_00845 1.7e-184 4.1.1.22 H Histidine carboxylase PI chain
BNMDBFLM_00846 5.5e-267 aaxC E Arginine ornithine antiporter
BNMDBFLM_00847 2.4e-167 glsA 3.5.1.2 E Belongs to the glutaminase family
BNMDBFLM_00848 1.4e-153 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
BNMDBFLM_00849 3.6e-253 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
BNMDBFLM_00850 5.2e-259 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
BNMDBFLM_00851 8.9e-159 htpX O Belongs to the peptidase M48B family
BNMDBFLM_00852 7e-93 lemA S LemA family
BNMDBFLM_00853 8e-87 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BNMDBFLM_00854 9.2e-121 pgm3 3.1.3.73 G Belongs to the phosphoglycerate mutase family
BNMDBFLM_00855 3.1e-101 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
BNMDBFLM_00856 7.4e-80 pduO S Haem-degrading
BNMDBFLM_00857 2.8e-105 pduO 2.5.1.17 S Cobalamin adenosyltransferase
BNMDBFLM_00858 1.8e-41 ccmL CQ Ethanolamine utilisation protein EutN/carboxysome
BNMDBFLM_00859 6.4e-90 S Putative propanediol utilisation
BNMDBFLM_00860 4.2e-118 pduL 2.3.1.222, 2.3.1.8 Q Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate
BNMDBFLM_00861 7.6e-43 pduA_4 CQ BMC
BNMDBFLM_00862 5.1e-75 pduK CQ BMC
BNMDBFLM_00863 1.7e-60 pduH S Dehydratase medium subunit
BNMDBFLM_00864 0.0 pduG D Diol dehydratase reactivase ATPase-like domain
BNMDBFLM_00865 2.1e-80 pduE 4.2.1.28 Q Dehydratase small subunit
BNMDBFLM_00866 3.8e-128 pduD 4.2.1.28, 4.2.1.30 Q Dehydratase medium subunit
BNMDBFLM_00867 3.4e-174 pduC 4.2.1.28 Q Dehydratase large subunit
BNMDBFLM_00868 1.5e-39 ykuJ S Protein of unknown function (DUF1797)
BNMDBFLM_00869 1.3e-179 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BNMDBFLM_00870 1.6e-199 cpoA GT4 M Glycosyltransferase, group 1 family protein
BNMDBFLM_00871 1.2e-230 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
BNMDBFLM_00872 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BNMDBFLM_00873 2.7e-39 ptsH G phosphocarrier protein HPR
BNMDBFLM_00874 2.2e-27
BNMDBFLM_00875 2.2e-73 clpE O Belongs to the ClpA ClpB family
BNMDBFLM_00876 7.7e-223 cycA E Amino acid permease
BNMDBFLM_00877 1.9e-138 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
BNMDBFLM_00878 1e-265 glnP P ABC transporter
BNMDBFLM_00879 2.2e-251 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
BNMDBFLM_00880 6.8e-297 fhaB M Rib/alpha-like repeat
BNMDBFLM_00881 9.3e-158 S Uncharacterized protein conserved in bacteria (DUF2252)
BNMDBFLM_00882 2e-22
BNMDBFLM_00883 3.1e-203 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
BNMDBFLM_00884 3e-75
BNMDBFLM_00885 1.4e-231 dacA 3.4.16.4 M Belongs to the peptidase S11 family
BNMDBFLM_00886 1.8e-131 ponA V Beta-lactamase enzyme family
BNMDBFLM_00887 1.7e-284 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
BNMDBFLM_00888 4.4e-217 uhpT EGP Major facilitator Superfamily
BNMDBFLM_00889 3.1e-36 ytjP 3.5.1.18 E Dipeptidase
BNMDBFLM_00890 6e-85 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
BNMDBFLM_00891 1.6e-165 aatB ET PFAM extracellular solute-binding protein, family 3
BNMDBFLM_00892 9.1e-84 ykhA 3.1.2.20 I Thioesterase superfamily
BNMDBFLM_00893 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
BNMDBFLM_00894 2.3e-116 yfbR S HD containing hydrolase-like enzyme
BNMDBFLM_00895 1.5e-13
BNMDBFLM_00896 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
BNMDBFLM_00897 1.1e-80 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BNMDBFLM_00898 9.3e-104 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BNMDBFLM_00899 8.8e-161 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
BNMDBFLM_00900 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BNMDBFLM_00901 1.8e-119 yoaK S Protein of unknown function (DUF1275)
BNMDBFLM_00902 1.4e-119 ybhL S Belongs to the BI1 family
BNMDBFLM_00903 1e-251 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
BNMDBFLM_00904 1e-10 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
BNMDBFLM_00905 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
BNMDBFLM_00906 2.7e-285 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
BNMDBFLM_00907 1.1e-141 fat 3.1.2.21 I Acyl-ACP thioesterase
BNMDBFLM_00908 1.5e-158 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BNMDBFLM_00909 1.6e-58 yabA L Involved in initiation control of chromosome replication
BNMDBFLM_00910 1.5e-186 holB 2.7.7.7 L DNA polymerase III
BNMDBFLM_00911 7.6e-52 yaaQ S Cyclic-di-AMP receptor
BNMDBFLM_00912 5.1e-116 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BNMDBFLM_00913 9.7e-39 S Protein of unknown function (DUF2508)
BNMDBFLM_00914 1.7e-23
BNMDBFLM_00915 2.8e-185
BNMDBFLM_00916 8.4e-31
BNMDBFLM_00917 1e-148 3.1.3.73 G Belongs to the phosphoglycerate mutase family
BNMDBFLM_00918 2.2e-128 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
BNMDBFLM_00919 7.5e-103 fic D Fic/DOC family
BNMDBFLM_00920 5.1e-69
BNMDBFLM_00921 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
BNMDBFLM_00922 8.4e-93 L nuclease
BNMDBFLM_00923 7e-184 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
BNMDBFLM_00924 4.4e-163 rrmA 2.1.1.187 H Methyltransferase
BNMDBFLM_00925 6.7e-95 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
BNMDBFLM_00926 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
BNMDBFLM_00927 1.2e-10 S Protein of unknown function (DUF4044)
BNMDBFLM_00928 7.8e-58
BNMDBFLM_00929 3.1e-77 mraZ K Belongs to the MraZ family
BNMDBFLM_00930 1.9e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
BNMDBFLM_00931 1.5e-56 ftsL D Cell division protein FtsL
BNMDBFLM_00932 1.8e-76 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
BNMDBFLM_00933 2.7e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
BNMDBFLM_00934 1.4e-121 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
BNMDBFLM_00935 3.8e-206 coiA 3.6.4.12 S Competence protein
BNMDBFLM_00936 1.5e-269 pipD E Dipeptidase
BNMDBFLM_00937 5.1e-116 yjbH Q Thioredoxin
BNMDBFLM_00938 4e-116 yjbM 2.7.6.5 S RelA SpoT domain protein
BNMDBFLM_00939 1.7e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BNMDBFLM_00940 2.4e-175 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
BNMDBFLM_00941 2.8e-264 S Protein of unknown function (DUF2971)
BNMDBFLM_00942 1.8e-161 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
BNMDBFLM_00943 7.9e-168 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
BNMDBFLM_00944 6e-22 epsB M biosynthesis protein
BNMDBFLM_00945 2.3e-171 brpA K Cell envelope-like function transcriptional attenuator common domain protein
BNMDBFLM_00946 2.2e-69 K Transcriptional regulator, HxlR family
BNMDBFLM_00947 2e-94
BNMDBFLM_00948 5e-72 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BNMDBFLM_00949 2.7e-120 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
BNMDBFLM_00950 1.5e-201 ykiI
BNMDBFLM_00951 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BNMDBFLM_00952 9.2e-281 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BNMDBFLM_00953 9.1e-228 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
BNMDBFLM_00954 4.7e-79 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
BNMDBFLM_00955 3.9e-104 T Ion transport 2 domain protein
BNMDBFLM_00956 0.0 S Bacterial membrane protein YfhO
BNMDBFLM_00957 5e-202 G Transporter, major facilitator family protein
BNMDBFLM_00958 2.4e-109 yvrI K sigma factor activity
BNMDBFLM_00959 1.1e-53 S Putative peptidoglycan binding domain
BNMDBFLM_00960 1.4e-124 yciB M ErfK YbiS YcfS YnhG
BNMDBFLM_00962 1.5e-103
BNMDBFLM_00963 7.1e-220 dacA 3.4.16.4 M Belongs to the peptidase S11 family
BNMDBFLM_00964 7e-126 S Alpha beta hydrolase
BNMDBFLM_00965 1.1e-211 gldA 1.1.1.6 C dehydrogenase
BNMDBFLM_00966 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
BNMDBFLM_00967 2.3e-178 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
BNMDBFLM_00968 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
BNMDBFLM_00969 2e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
BNMDBFLM_00970 4.5e-146 potB P ABC transporter permease
BNMDBFLM_00971 4.9e-140 potC P ABC transporter permease
BNMDBFLM_00972 1.1e-256 yfnA E Amino Acid
BNMDBFLM_00973 6.9e-74 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
BNMDBFLM_00974 5.2e-104 gmk2 2.7.4.8 F Guanylate kinase
BNMDBFLM_00975 1.5e-82 zur P Belongs to the Fur family
BNMDBFLM_00976 3.1e-17 3.2.1.14 GH18
BNMDBFLM_00977 2e-152
BNMDBFLM_00978 3.4e-39 pspC KT positive regulation of macromolecule biosynthetic process
BNMDBFLM_00979 1.6e-94 K Transcriptional regulator (TetR family)
BNMDBFLM_00980 2.3e-60 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BNMDBFLM_00981 8.3e-69 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
BNMDBFLM_00982 2.2e-148 S DUF218 domain
BNMDBFLM_00983 0.0 ubiB S ABC1 family
BNMDBFLM_00984 2.2e-246 yhdP S Transporter associated domain
BNMDBFLM_00985 5e-75 copY K Copper transport repressor CopY TcrY
BNMDBFLM_00986 4.5e-242 EGP Major facilitator Superfamily
BNMDBFLM_00987 4.5e-74 yeaL S UPF0756 membrane protein
BNMDBFLM_00988 2.4e-133 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BNMDBFLM_00989 2e-255 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BNMDBFLM_00990 6.9e-133 stp 3.1.3.16 T phosphatase
BNMDBFLM_00991 0.0 KLT serine threonine protein kinase
BNMDBFLM_00992 2.6e-166 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
BNMDBFLM_00993 1.5e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
BNMDBFLM_00994 7.4e-123 thiN 2.7.6.2 H thiamine pyrophosphokinase
BNMDBFLM_00995 7e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
BNMDBFLM_00997 1.7e-198 asnA 6.3.1.1 F aspartate--ammonia ligase
BNMDBFLM_00998 6e-257 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
BNMDBFLM_00999 9.8e-126 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
BNMDBFLM_01000 1.1e-206 2.7.7.65 T GGDEF domain
BNMDBFLM_01001 7.5e-91
BNMDBFLM_01002 4e-256 pgaC GT2 M Glycosyl transferase
BNMDBFLM_01003 1.7e-159 T EAL domain
BNMDBFLM_01004 6.5e-38 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
BNMDBFLM_01005 1.8e-14
BNMDBFLM_01006 1.2e-213 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
BNMDBFLM_01007 4.5e-183 ccpA K catabolite control protein A
BNMDBFLM_01008 1.8e-137
BNMDBFLM_01009 3.5e-132 yebC K Transcriptional regulatory protein
BNMDBFLM_01010 7.9e-185 comGA NU Type II IV secretion system protein
BNMDBFLM_01011 1e-38 comGC U competence protein ComGC
BNMDBFLM_01012 1.5e-79 NU general secretion pathway protein
BNMDBFLM_01013 4.8e-45
BNMDBFLM_01014 3.6e-73
BNMDBFLM_01016 5.9e-146 ytxK 2.1.1.72 L N-6 DNA Methylase
BNMDBFLM_01017 1.1e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BNMDBFLM_01018 8.8e-118 S Calcineurin-like phosphoesterase
BNMDBFLM_01019 4.4e-100 yutD S Protein of unknown function (DUF1027)
BNMDBFLM_01020 2.7e-140 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
BNMDBFLM_01021 2.8e-114 S Protein of unknown function (DUF1461)
BNMDBFLM_01022 5.5e-110 dedA S SNARE-like domain protein
BNMDBFLM_01023 0.0 vicK 2.7.13.3 T Histidine kinase
BNMDBFLM_01024 3.1e-130 K response regulator
BNMDBFLM_01026 0.0 lmrA 3.6.3.44 V ABC transporter
BNMDBFLM_01027 3.3e-74 K helix_turn_helix multiple antibiotic resistance protein
BNMDBFLM_01029 3.1e-101 K DNA-binding helix-turn-helix protein
BNMDBFLM_01030 1.7e-114 pbuG S permease
BNMDBFLM_01031 3.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
BNMDBFLM_01032 9e-253 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
BNMDBFLM_01033 7e-217 iscS2 2.8.1.7 E Aminotransferase class V
BNMDBFLM_01034 8.5e-229 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BNMDBFLM_01035 9.8e-208 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
BNMDBFLM_01036 5.6e-228 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
BNMDBFLM_01037 4.3e-36 higA K addiction module antidote protein HigA
BNMDBFLM_01038 0.0 L PLD-like domain
BNMDBFLM_01040 5.1e-181 rihA 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
BNMDBFLM_01041 1.8e-203 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BNMDBFLM_01042 0.0 pacL 3.6.3.8 P P-type ATPase
BNMDBFLM_01043 7.6e-85 dps P Belongs to the Dps family
BNMDBFLM_01044 3e-254 yagE E amino acid
BNMDBFLM_01045 2.5e-118 gph 3.1.3.18 S HAD hydrolase, family IA, variant
BNMDBFLM_01046 5.7e-30 3.6.4.12 S PD-(D/E)XK nuclease family transposase
BNMDBFLM_01047 2e-25 L Helix-turn-helix domain
BNMDBFLM_01048 5.1e-87 L Helix-turn-helix domain
BNMDBFLM_01049 1e-127 L hmm pf00665
BNMDBFLM_01050 5.1e-96 P Cadmium resistance transporter
BNMDBFLM_01051 5.2e-56 K Transcriptional regulator, ArsR family
BNMDBFLM_01052 1e-240 mepA V MATE efflux family protein
BNMDBFLM_01053 1.5e-55 trxA O Belongs to the thioredoxin family
BNMDBFLM_01054 2.3e-131 terC P membrane
BNMDBFLM_01055 7.4e-177 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
BNMDBFLM_01056 9.7e-169 corA P CorA-like Mg2+ transporter protein
BNMDBFLM_01057 5.5e-280 pipD E Dipeptidase
BNMDBFLM_01058 2.6e-183 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BNMDBFLM_01060 6.6e-35 S Transglycosylase associated protein
BNMDBFLM_01061 1.3e-235 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BNMDBFLM_01062 5e-127 3.1.3.73 G phosphoglycerate mutase
BNMDBFLM_01063 3.6e-117 dedA S SNARE associated Golgi protein
BNMDBFLM_01064 0.0 helD 3.6.4.12 L DNA helicase
BNMDBFLM_01065 4.3e-65 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
BNMDBFLM_01066 8.7e-53
BNMDBFLM_01067 0.0 oatA I Acyltransferase
BNMDBFLM_01068 2.1e-79 K Transcriptional regulator
BNMDBFLM_01069 8.9e-150 XK27_02985 S Cof-like hydrolase
BNMDBFLM_01070 1.8e-78 lytE M Lysin motif
BNMDBFLM_01072 3.8e-136 K response regulator
BNMDBFLM_01073 1e-199 gntT EG Gluconate
BNMDBFLM_01074 1.4e-184 K Transcriptional regulator, LacI family
BNMDBFLM_01075 1.8e-292 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
BNMDBFLM_01076 2.9e-96
BNMDBFLM_01077 2.1e-25
BNMDBFLM_01078 2.1e-61 asp S Asp23 family, cell envelope-related function
BNMDBFLM_01079 4.4e-91 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
BNMDBFLM_01081 3.8e-32
BNMDBFLM_01082 8.3e-69 yqkB S Belongs to the HesB IscA family
BNMDBFLM_01083 4.5e-137 I alpha/beta hydrolase fold
BNMDBFLM_01084 3.2e-164 lsa S ABC transporter
BNMDBFLM_01085 6.1e-102 lsa S ABC transporter
BNMDBFLM_01086 3e-181 yfeX P Peroxidase
BNMDBFLM_01087 1.5e-275 arcD S C4-dicarboxylate anaerobic carrier
BNMDBFLM_01088 1.2e-146 pduQ C Iron-containing alcohol dehydrogenase
BNMDBFLM_01089 2.2e-221 ackA 2.7.2.1, 2.7.2.15 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BNMDBFLM_01090 5.5e-56 pduU E BMC
BNMDBFLM_01091 1.9e-149 3.1.3.48 T Pfam:Y_phosphatase3C
BNMDBFLM_01092 3.1e-121 pgm1 3.1.3.73 G phosphoglycerate mutase
BNMDBFLM_01093 3.1e-93 P Cadmium resistance transporter
BNMDBFLM_01094 3e-72 eutP E Ethanolamine utilisation - propanediol utilisation
BNMDBFLM_01095 1e-78 fld C Flavodoxin
BNMDBFLM_01096 7.1e-158 XK27_04590 S NADPH-dependent FMN reductase
BNMDBFLM_01097 1.7e-102 cobO 2.5.1.17 S Cobalamin adenosyltransferase
BNMDBFLM_01098 1.8e-40 1.1.1.193, 3.5.4.26 H RibD C-terminal domain
BNMDBFLM_01099 3e-24
BNMDBFLM_01100 1.1e-19 relB L Addiction module antitoxin, RelB DinJ family
BNMDBFLM_01101 7.5e-91 XK27_08850 J Aminoacyl-tRNA editing domain
BNMDBFLM_01102 1e-56 yphI 1.14.99.57 S Antibiotic biosynthesis monooxygenase
BNMDBFLM_01103 7.7e-199 V Beta-lactamase
BNMDBFLM_01104 3.2e-95 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
BNMDBFLM_01105 1.7e-122 yhiD S MgtC family
BNMDBFLM_01106 4e-121 S GyrI-like small molecule binding domain
BNMDBFLM_01108 3.3e-58 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
BNMDBFLM_01109 4.2e-231 ymfF S Peptidase M16 inactive domain protein
BNMDBFLM_01110 1.5e-160 aatB ET ABC transporter substrate-binding protein
BNMDBFLM_01111 1.2e-117 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
BNMDBFLM_01112 3.2e-102 glnP P ABC transporter permease
BNMDBFLM_01113 8.7e-93 mreD M rod shape-determining protein MreD
BNMDBFLM_01114 5.9e-152 mreC M Involved in formation and maintenance of cell shape
BNMDBFLM_01115 1.7e-179 mreB D cell shape determining protein MreB
BNMDBFLM_01116 7e-47 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BNMDBFLM_01117 7.3e-309 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BNMDBFLM_01118 3.5e-91 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
BNMDBFLM_01119 3.4e-35 nrdH O Glutaredoxin
BNMDBFLM_01120 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BNMDBFLM_01121 6.2e-105 folE 2.7.6.3, 3.5.4.16 F GTP cyclohydrolase 1
BNMDBFLM_01122 4.4e-94 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
BNMDBFLM_01123 1.1e-56 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BNMDBFLM_01124 8.7e-74
BNMDBFLM_01126 1.9e-43
BNMDBFLM_01127 2.8e-120 S CAAX protease self-immunity
BNMDBFLM_01128 2.1e-32
BNMDBFLM_01129 8e-163 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BNMDBFLM_01130 4.6e-188 rbsR K Periplasmic binding proteins and sugar binding domain of LacI family
BNMDBFLM_01131 0.0 dnaE 2.7.7.7 L DNA polymerase
BNMDBFLM_01132 2.1e-271 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
BNMDBFLM_01133 1.6e-168 cvfB S S1 domain
BNMDBFLM_01134 3.7e-165 xerD D recombinase XerD
BNMDBFLM_01135 1.1e-64 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
BNMDBFLM_01136 1.9e-141 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BNMDBFLM_01137 2e-211 EGP Major facilitator Superfamily
BNMDBFLM_01138 4.7e-257 pepC 3.4.22.40 E aminopeptidase
BNMDBFLM_01139 9.6e-115 ylbE GM NAD dependent epimerase dehydratase family protein
BNMDBFLM_01140 0.0 pepN 3.4.11.2 E aminopeptidase
BNMDBFLM_01141 4.8e-96 K Acetyltransferase (GNAT) domain
BNMDBFLM_01142 1.2e-160 S Alpha beta hydrolase
BNMDBFLM_01143 3.1e-161 gspA M family 8
BNMDBFLM_01144 6e-120 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
BNMDBFLM_01145 9.4e-94
BNMDBFLM_01146 5.5e-161 degV S EDD domain protein, DegV family
BNMDBFLM_01147 0.0 FbpA K Fibronectin-binding protein
BNMDBFLM_01148 1.2e-129 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
BNMDBFLM_01149 5.3e-104 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BNMDBFLM_01150 8e-196 ypbB 5.1.3.1 S Helix-turn-helix domain
BNMDBFLM_01151 1e-273 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
BNMDBFLM_01152 2.5e-13 M Lysin motif
BNMDBFLM_01153 6.9e-119 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
BNMDBFLM_01154 7.1e-245 steT E amino acid
BNMDBFLM_01155 1.7e-162 rapZ S Displays ATPase and GTPase activities
BNMDBFLM_01156 6.5e-187 ybhK S Required for morphogenesis under gluconeogenic growth conditions
BNMDBFLM_01157 2.4e-170 whiA K May be required for sporulation
BNMDBFLM_01159 8.8e-15
BNMDBFLM_01160 2.1e-103 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
BNMDBFLM_01161 3.9e-95 cbiA 6.3.5.11, 6.3.5.9 F Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source
BNMDBFLM_01162 5.7e-180 cobD 6.3.1.10 H Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
BNMDBFLM_01163 9.2e-124 cbiC 5.4.99.60, 5.4.99.61 H Precorrin-8X methylmutase
BNMDBFLM_01164 1.6e-208 cbiD 2.1.1.195 H Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
BNMDBFLM_01165 1e-110 cbiE 2.1.1.132, 2.1.1.289 H Tetrapyrrole (Corrin/Porphyrin) Methylases
BNMDBFLM_01166 4.9e-99 cbiT 2.1.1.132, 2.1.1.196 H Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
BNMDBFLM_01167 4.8e-137 cobM 1.3.1.76, 2.1.1.131, 2.1.1.133, 2.1.1.271, 3.7.1.12, 4.99.1.4 H Tetrapyrrole (Corrin/Porphyrin) Methylases
BNMDBFLM_01168 8.2e-196 cbiG 2.1.1.131, 2.1.1.133, 2.1.1.271, 3.7.1.12 H Cobalamin synthesis G C-terminus
BNMDBFLM_01169 4.5e-61 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
BNMDBFLM_01171 2e-296 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BNMDBFLM_01172 2.7e-235 dltB M MBOAT, membrane-bound O-acyltransferase family
BNMDBFLM_01173 1.7e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
BNMDBFLM_01174 3.6e-254 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BNMDBFLM_01175 3.2e-50 azlD E Branched-chain amino acid transport
BNMDBFLM_01176 2e-121 azlC E azaleucine resistance protein AzlC
BNMDBFLM_01177 2.6e-266 K Aminotransferase class I and II
BNMDBFLM_01178 1.9e-305 S amidohydrolase
BNMDBFLM_01179 1.6e-165 S reductase
BNMDBFLM_01180 1.6e-93 2.3.1.183 M Acetyltransferase GNAT family
BNMDBFLM_01181 1.3e-263 dtpT U amino acid peptide transporter
BNMDBFLM_01182 5.2e-161 yjjH S Calcineurin-like phosphoesterase
BNMDBFLM_01185 1.5e-115
BNMDBFLM_01186 9.7e-253 EGP Major facilitator Superfamily
BNMDBFLM_01187 4.2e-286 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
BNMDBFLM_01188 8.2e-218 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
BNMDBFLM_01189 1.1e-136 S Putative adhesin
BNMDBFLM_01190 6.2e-79 XK27_06920 S Protein of unknown function (DUF1700)
BNMDBFLM_01191 1.1e-56 K transcriptional regulator PadR family
BNMDBFLM_01192 2e-40 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
BNMDBFLM_01194 3.4e-48
BNMDBFLM_01195 4.3e-214 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
BNMDBFLM_01196 1.1e-130 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
BNMDBFLM_01197 3.9e-173 deoR K sugar-binding domain protein
BNMDBFLM_01198 4.1e-209 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
BNMDBFLM_01199 3.8e-125 K response regulator
BNMDBFLM_01200 4.2e-77 marR K Transcriptional regulator, MarR family
BNMDBFLM_01201 3.8e-179 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BNMDBFLM_01202 6.5e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
BNMDBFLM_01203 3.3e-164 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
BNMDBFLM_01204 1.3e-131 IQ reductase
BNMDBFLM_01205 5.6e-228 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
BNMDBFLM_01206 2.1e-76 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
BNMDBFLM_01207 1e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
BNMDBFLM_01208 3.7e-142 yabB 2.1.1.223 L Methyltransferase small domain
BNMDBFLM_01209 5.4e-49 yazA L GIY-YIG catalytic domain protein
BNMDBFLM_01210 5.2e-184 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BNMDBFLM_01211 1.2e-143 rpsB J Belongs to the universal ribosomal protein uS2 family
BNMDBFLM_01212 2.4e-153 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BNMDBFLM_01213 2e-129 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
BNMDBFLM_01214 7.4e-95 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
BNMDBFLM_01215 1.7e-238 yflS P Sodium:sulfate symporter transmembrane region
BNMDBFLM_01216 8e-160 mleR K LysR family
BNMDBFLM_01217 9.4e-253 yjjP S Putative threonine/serine exporter
BNMDBFLM_01218 4.5e-120 ung2 3.2.2.27 L Uracil-DNA glycosylase
BNMDBFLM_01219 9.3e-200 waaB GT4 M Glycosyl transferases group 1
BNMDBFLM_01220 4.9e-260 rfbX S Membrane protein involved in the export of O-antigen and teichoic acid
BNMDBFLM_01221 1.4e-105 M biosynthesis protein
BNMDBFLM_01222 4.3e-217 cps3F
BNMDBFLM_01223 9.4e-97 glf 5.4.99.9 M UDP-galactopyranose mutase
BNMDBFLM_01224 2.4e-138 ampC V Beta-lactamase
BNMDBFLM_01225 4.1e-239 arcA 3.5.3.6 E Arginine
BNMDBFLM_01226 1.2e-79 argR K Regulates arginine biosynthesis genes
BNMDBFLM_01227 6.8e-262 E Arginine ornithine antiporter
BNMDBFLM_01228 2.3e-66 macB2 V ABC transporter, ATP-binding protein
BNMDBFLM_01229 0.0 ysaB V FtsX-like permease family
BNMDBFLM_01230 7.4e-160 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
BNMDBFLM_01231 1.8e-170 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
BNMDBFLM_01232 3.7e-190 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BNMDBFLM_01233 8.2e-182 ABC-SBP S ABC transporter
BNMDBFLM_01234 1.6e-88 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
BNMDBFLM_01235 6.4e-219 htrA 3.4.21.107 O serine protease
BNMDBFLM_01236 1.2e-154 vicX 3.1.26.11 S domain protein
BNMDBFLM_01237 2.6e-152 yycI S YycH protein
BNMDBFLM_01238 5.7e-183 3.1.21.3 V Type I restriction modification DNA specificity domain
BNMDBFLM_01239 3.1e-300 hsdM 2.1.1.72 V type I restriction-modification system
BNMDBFLM_01240 5.4e-236
BNMDBFLM_01241 1.3e-81 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BNMDBFLM_01242 7.2e-83 S Threonine/Serine exporter, ThrE
BNMDBFLM_01243 2.1e-132 thrE S Putative threonine/serine exporter
BNMDBFLM_01244 3.5e-31 cspC K Cold shock protein
BNMDBFLM_01245 4.8e-125 sirR K iron dependent repressor
BNMDBFLM_01246 5.9e-166 czcD P cation diffusion facilitator family transporter
BNMDBFLM_01247 7.7e-118 S membrane
BNMDBFLM_01248 1.3e-109 S VIT family
BNMDBFLM_01249 2.9e-134 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BNMDBFLM_01250 3.5e-230 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BNMDBFLM_01251 1.4e-139 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BNMDBFLM_01252 3.6e-148 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
BNMDBFLM_01253 6.3e-25 S Domain of unknown function (DUF5067)
BNMDBFLM_01254 3.5e-166 L Phage integrase, N-terminal SAM-like domain
BNMDBFLM_01255 1e-25
BNMDBFLM_01258 2.3e-53
BNMDBFLM_01260 1.5e-70 M NLP P60 protein
BNMDBFLM_01261 4.4e-16 K LysR substrate binding domain
BNMDBFLM_01262 3.9e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
BNMDBFLM_01263 3e-248 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
BNMDBFLM_01264 1.1e-172 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
BNMDBFLM_01265 4.6e-129 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
BNMDBFLM_01266 7.9e-117 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BNMDBFLM_01267 5.7e-53 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
BNMDBFLM_01268 1.3e-33 ywzB S Protein of unknown function (DUF1146)
BNMDBFLM_01269 6.5e-243 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BNMDBFLM_01270 1.9e-178 mbl D Cell shape determining protein MreB Mrl
BNMDBFLM_01271 2.7e-32 S Protein of unknown function (DUF2969)
BNMDBFLM_01272 1.1e-220 rodA D Belongs to the SEDS family
BNMDBFLM_01273 1e-47 gcvH E glycine cleavage
BNMDBFLM_01274 6.6e-125 phoU P Plays a role in the regulation of phosphate uptake
BNMDBFLM_01275 1.1e-136 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
BNMDBFLM_01276 2.6e-155 pstA P Phosphate transport system permease protein PstA
BNMDBFLM_01277 1.1e-153 pstC P probably responsible for the translocation of the substrate across the membrane
BNMDBFLM_01278 4.6e-160 pstS P Phosphate
BNMDBFLM_01279 5.6e-219 yqeH S Ribosome biogenesis GTPase YqeH
BNMDBFLM_01280 1.9e-47 yhbY J RNA-binding protein
BNMDBFLM_01281 7.9e-125 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BNMDBFLM_01282 9.2e-115 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
BNMDBFLM_01283 1.3e-60 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
BNMDBFLM_01284 1.4e-141 yqeM Q Methyltransferase
BNMDBFLM_01285 2.9e-215 ylbM S Belongs to the UPF0348 family
BNMDBFLM_01286 6.9e-127 O Zinc-dependent metalloprotease
BNMDBFLM_01287 1.9e-115 S Membrane
BNMDBFLM_01288 4.2e-200 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
BNMDBFLM_01289 5.7e-174 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
BNMDBFLM_01291 4.1e-147 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BNMDBFLM_01292 6.5e-150 E Glyoxalase-like domain
BNMDBFLM_01293 7.5e-155 glcU U sugar transport
BNMDBFLM_01294 2.1e-148 dhaT 1.1.1.1, 1.1.1.202 C Dehydrogenase
BNMDBFLM_01295 1.7e-56 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
BNMDBFLM_01296 7.5e-58 ytzB S Small secreted protein
BNMDBFLM_01297 2.6e-169 glsA 3.5.1.2 E Belongs to the glutaminase family
BNMDBFLM_01298 1.1e-186 iolS C Aldo keto reductase
BNMDBFLM_01299 3.5e-293 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
BNMDBFLM_01300 1.8e-83 S Alpha/beta hydrolase of unknown function (DUF915)
BNMDBFLM_01301 7.5e-21
BNMDBFLM_01302 1.2e-90 ntd 2.4.2.6 F Nucleoside
BNMDBFLM_01303 3.7e-159 3.1.3.102, 3.1.3.104 S hydrolase
BNMDBFLM_01304 2.3e-36 S Lipopolysaccharide assembly protein A domain
BNMDBFLM_01306 1.7e-47 L Belongs to the 'phage' integrase family
BNMDBFLM_01307 5e-22 S Phage derived protein Gp49-like (DUF891)
BNMDBFLM_01310 2.5e-203 feoB P transporter of a GTP-driven Fe(2 ) uptake system
BNMDBFLM_01311 1.6e-274 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
BNMDBFLM_01312 8.2e-151 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
BNMDBFLM_01313 8.4e-92 menH 4.2.99.20 S Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC)
BNMDBFLM_01314 4.6e-88 menD 2.2.1.9 H Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
BNMDBFLM_01315 1.3e-176 aadAT EK Aminotransferase, class I
BNMDBFLM_01317 1e-248 M Glycosyl transferase family group 2
BNMDBFLM_01318 2.7e-213 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
BNMDBFLM_01319 1.7e-82 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BNMDBFLM_01320 9.8e-177 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
BNMDBFLM_01321 1.1e-149 cps1D M Domain of unknown function (DUF4422)
BNMDBFLM_01322 9.3e-144 recX 2.4.1.337 GT4 S Regulatory protein RecX
BNMDBFLM_01323 2.2e-31
BNMDBFLM_01324 5e-34 S Protein of unknown function (DUF2922)
BNMDBFLM_01325 8.5e-154 yihY S Belongs to the UPF0761 family
BNMDBFLM_01326 2.9e-128 trmK 2.1.1.217 S SAM-dependent methyltransferase
BNMDBFLM_01327 3.6e-235 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
BNMDBFLM_01328 1.8e-30 S Protein of unknown function (DUF2929)
BNMDBFLM_01329 2.2e-44
BNMDBFLM_01330 0.0 nylA 3.5.1.4 J Belongs to the amidase family
BNMDBFLM_01331 2.4e-22
BNMDBFLM_01332 6.5e-41
BNMDBFLM_01333 1.7e-96 K Acetyltransferase (GNAT) domain
BNMDBFLM_01334 5.7e-191 ganB 3.2.1.89 G arabinogalactan
BNMDBFLM_01335 2.1e-171 3.2.1.23, 3.2.1.89 G arabinogalactan endo-1,4-beta-galactosidase activity
BNMDBFLM_01336 1.2e-64 gntR1 K Transcriptional regulator, GntR family
BNMDBFLM_01337 1e-159 V ABC transporter, ATP-binding protein
BNMDBFLM_01338 2.6e-118
BNMDBFLM_01339 1.1e-88 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G MucBP domain
BNMDBFLM_01340 3.4e-233 cinA 3.5.1.42 S Belongs to the CinA family
BNMDBFLM_01341 2.5e-101 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BNMDBFLM_01342 1.9e-141 ymfM S Helix-turn-helix domain
BNMDBFLM_01343 7.5e-163 ymfH S Peptidase M16
BNMDBFLM_01344 2.9e-237 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
BNMDBFLM_01345 1.1e-173 K AI-2E family transporter
BNMDBFLM_01346 6.5e-105 1.1.1.90 C Zn-dependent alcohol dehydrogenases, class III
BNMDBFLM_01347 1.2e-54 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BNMDBFLM_01348 1.6e-183
BNMDBFLM_01349 6.4e-99 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BNMDBFLM_01350 4e-137 S Phosphotransferase system, EIIC
BNMDBFLM_01351 2.7e-163 K LysR substrate binding domain
BNMDBFLM_01352 2.2e-113 manA 5.3.1.8 G mannose-6-phosphate isomerase
BNMDBFLM_01353 5.2e-98 2.3.1.128 K acetyltransferase
BNMDBFLM_01354 6.2e-193
BNMDBFLM_01356 4.9e-14 L Transposase
BNMDBFLM_01357 1.6e-90
BNMDBFLM_01359 3.6e-57
BNMDBFLM_01360 1.1e-240 yjcE P Sodium proton antiporter
BNMDBFLM_01364 5.4e-32 yyzM S Bacterial protein of unknown function (DUF951)
BNMDBFLM_01365 5.9e-155 spo0J K Belongs to the ParB family
BNMDBFLM_01366 3.6e-140 soj D Sporulation initiation inhibitor
BNMDBFLM_01367 7.4e-151 noc K Belongs to the ParB family
BNMDBFLM_01368 5.7e-36 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
BNMDBFLM_01369 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
BNMDBFLM_01370 7e-161 EG EamA-like transporter family
BNMDBFLM_01371 5e-27 Q pyridine nucleotide-disulphide oxidoreductase
BNMDBFLM_01372 1.5e-163 fadB4 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
BNMDBFLM_01373 2.7e-171 rihC 3.2.2.1 F Nucleoside
BNMDBFLM_01374 1e-218 nupG F Nucleoside transporter
BNMDBFLM_01375 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
BNMDBFLM_01376 2.6e-180 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BNMDBFLM_01377 2.7e-263 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BNMDBFLM_01378 1.6e-105 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
BNMDBFLM_01379 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BNMDBFLM_01384 5.2e-14 S Psort location Cytoplasmic, score 8.87
BNMDBFLM_01385 8.8e-149 L Phage integrase family
BNMDBFLM_01388 1.7e-156 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
BNMDBFLM_01389 2.4e-272 ywfO S HD domain protein
BNMDBFLM_01390 4.1e-150 yxeH S hydrolase
BNMDBFLM_01391 5.6e-50
BNMDBFLM_01393 3.5e-188 yegS 2.7.1.107 G Lipid kinase
BNMDBFLM_01394 2.4e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BNMDBFLM_01395 4.3e-106 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
BNMDBFLM_01396 8e-61 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
BNMDBFLM_01397 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BNMDBFLM_01398 1.4e-201 yloV S DAK2 domain fusion protein YloV
BNMDBFLM_01399 3.4e-41 mdsC 2.7.1.39 S Psort location Cytoplasmic, score 8.87
BNMDBFLM_01400 2e-202 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BNMDBFLM_01401 9.9e-188 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
BNMDBFLM_01402 9.3e-236 nox C NADH oxidase
BNMDBFLM_01403 1.1e-258 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
BNMDBFLM_01404 1.3e-218 yfeO P Voltage gated chloride channel
BNMDBFLM_01405 1.4e-173 sptS 2.7.13.3 T Histidine kinase
BNMDBFLM_01406 2.9e-38 ktrB P Potassium uptake protein
BNMDBFLM_01407 3.5e-100 ktrA P domain protein
BNMDBFLM_01408 6.8e-85 Q Methyltransferase
BNMDBFLM_01409 1.6e-233 mntH P H( )-stimulated, divalent metal cation uptake system
BNMDBFLM_01410 5e-142 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
BNMDBFLM_01413 5.3e-08 L DnaD domain protein
BNMDBFLM_01415 4.8e-72
BNMDBFLM_01417 2.1e-66
BNMDBFLM_01418 8e-96 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BNMDBFLM_01419 3.2e-176
BNMDBFLM_01420 4.4e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BNMDBFLM_01421 2.1e-126 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
BNMDBFLM_01422 3.1e-136 XK27_01040 S Protein of unknown function (DUF1129)
BNMDBFLM_01423 4.4e-118 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BNMDBFLM_01424 1.1e-236 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
BNMDBFLM_01425 1.5e-217 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BNMDBFLM_01426 7.7e-32 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
BNMDBFLM_01427 4.2e-115 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
BNMDBFLM_01428 1.7e-54
BNMDBFLM_01429 6.6e-159 snf 2.7.11.1 KL domain protein
BNMDBFLM_01430 1.7e-145 ywqE 3.1.3.48 GM PHP domain protein
BNMDBFLM_01431 7.2e-20 M Glycosyl hydrolases family 25
BNMDBFLM_01432 3e-212 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
BNMDBFLM_01433 2.7e-105 pncA Q Isochorismatase family
BNMDBFLM_01434 2.7e-274 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BNMDBFLM_01435 1.9e-132 3.6.1.13, 3.6.1.55 F NUDIX domain
BNMDBFLM_01436 2.2e-190 lacR K Transcriptional regulator
BNMDBFLM_01437 5e-84
BNMDBFLM_01438 2.8e-58 yhaI S Protein of unknown function (DUF805)
BNMDBFLM_01439 2.1e-301 2.1.1.72 V type I restriction-modification system
BNMDBFLM_01440 1.4e-97 3.1.21.3 V Type I restriction modification DNA specificity domain
BNMDBFLM_01444 4.9e-134 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
BNMDBFLM_01445 1.6e-140 accA 2.1.3.15, 6.4.1.2 I alpha subunit
BNMDBFLM_01446 6.5e-143 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BNMDBFLM_01447 4.3e-109 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
BNMDBFLM_01448 1.2e-39 ybbR S YbbR-like protein
BNMDBFLM_01449 2.7e-252 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BNMDBFLM_01450 1e-139 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
BNMDBFLM_01451 5.1e-125 srtA 3.4.22.70 M sortase family
BNMDBFLM_01452 2.7e-168 S Alpha/beta hydrolase of unknown function (DUF915)
BNMDBFLM_01453 4.1e-69 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
BNMDBFLM_01454 3.6e-53 L transposase, IS605 OrfB family
BNMDBFLM_01455 2.1e-67 ywiB S Domain of unknown function (DUF1934)
BNMDBFLM_01456 2.5e-50 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
BNMDBFLM_01457 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
BNMDBFLM_01458 7.2e-73 brpA K Cell envelope-like function transcriptional attenuator common domain protein
BNMDBFLM_01459 2.1e-288 S Psort location CytoplasmicMembrane, score
BNMDBFLM_01460 1.4e-164 yueF S AI-2E family transporter
BNMDBFLM_01461 1.1e-147 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
BNMDBFLM_01462 1.8e-107 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BNMDBFLM_01463 2.1e-96 S Phosphoesterase
BNMDBFLM_01464 2.7e-76 ykuL S (CBS) domain
BNMDBFLM_01465 6.8e-150 3.1.3.102, 3.1.3.104, 3.1.3.23 S haloacid dehalogenase-like hydrolase
BNMDBFLM_01466 5.5e-115 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BNMDBFLM_01467 1.5e-214 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
BNMDBFLM_01468 8.4e-130 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BNMDBFLM_01470 1.5e-192 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BNMDBFLM_01471 3.9e-156 metQ1 P Belongs to the nlpA lipoprotein family
BNMDBFLM_01472 3.6e-171 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
BNMDBFLM_01473 1.7e-221 norA EGP Major facilitator Superfamily
BNMDBFLM_01474 8.6e-44 1.3.5.4 S FMN binding
BNMDBFLM_01475 4.9e-119 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BNMDBFLM_01476 1.2e-266 yfnA E amino acid
BNMDBFLM_01477 6.3e-257 gabT 2.6.1.19 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BNMDBFLM_01479 1.8e-204 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
BNMDBFLM_01480 0.0 helD 3.6.4.12 L DNA helicase
BNMDBFLM_01481 1.7e-81 ndk 2.7.4.6 F Belongs to the NDK family
BNMDBFLM_01482 1.3e-187 hpaIM 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
BNMDBFLM_01483 9.1e-192 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
BNMDBFLM_01484 6e-166 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
BNMDBFLM_01485 1.3e-232 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
BNMDBFLM_01486 3.8e-176
BNMDBFLM_01487 4.2e-132 cobB K SIR2 family
BNMDBFLM_01489 7.4e-163 yunF F Protein of unknown function DUF72
BNMDBFLM_01490 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BNMDBFLM_01491 2.6e-157 tatD L hydrolase, TatD family
BNMDBFLM_01492 5e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BNMDBFLM_01493 3.8e-162 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
BNMDBFLM_01494 6.8e-37 veg S Biofilm formation stimulator VEG
BNMDBFLM_01495 3.1e-161 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
BNMDBFLM_01496 1.3e-170 znuA P Belongs to the bacterial solute-binding protein 9 family
BNMDBFLM_01497 2.1e-09 fhuC P ABC transporter
BNMDBFLM_01498 1.8e-95 fhuC P ABC transporter
BNMDBFLM_01499 3.2e-128 znuB U ABC 3 transport family
BNMDBFLM_01500 6.9e-150 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
BNMDBFLM_01501 1.5e-242 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BNMDBFLM_01502 1.1e-178 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BNMDBFLM_01503 1.6e-51
BNMDBFLM_01504 0.0 S SEC-C Motif Domain Protein
BNMDBFLM_01505 3.8e-125 yclK 2.7.13.3 T Histidine kinase
BNMDBFLM_01506 5.7e-155 glcU U sugar transport
BNMDBFLM_01507 1.4e-102 lacA 2.3.1.79 S Transferase hexapeptide repeat
BNMDBFLM_01508 8.7e-116 lssY 3.6.1.27 I Acid phosphatase homologues
BNMDBFLM_01509 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
BNMDBFLM_01510 1.6e-180 3.1.21.3 V Type I restriction modification DNA specificity domain
BNMDBFLM_01511 2e-129 L Belongs to the 'phage' integrase family
BNMDBFLM_01512 9.6e-286 S C4-dicarboxylate anaerobic carrier
BNMDBFLM_01513 6.5e-127 pgm3 3.1.3.73 G phosphoglycerate mutase family
BNMDBFLM_01514 1.3e-41
BNMDBFLM_01515 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
BNMDBFLM_01516 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
BNMDBFLM_01517 2.8e-170 yniA G Phosphotransferase enzyme family
BNMDBFLM_01518 1.1e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
BNMDBFLM_01519 1.5e-121 K response regulator
BNMDBFLM_01520 9.8e-280 arlS 2.7.13.3 T Histidine kinase
BNMDBFLM_01521 1.8e-51 tnpR L Resolvase, N terminal domain
BNMDBFLM_01523 8.6e-100 fosD G PTS system mannose/fructose/sorbose family IID component
BNMDBFLM_01524 2.6e-64 levC G PTS system sorbose-specific iic component
BNMDBFLM_01525 1.7e-131 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
BNMDBFLM_01526 0.0 lacZ 3.2.1.23 G -beta-galactosidase
BNMDBFLM_01527 1.1e-36 lacS G Transporter
BNMDBFLM_01528 5.7e-132 cobJ 2.1.1.131, 2.1.1.133, 2.1.1.271, 3.7.1.12, 6.3.5.10 H Tetrapyrrole (Corrin/Porphyrin) Methylases
BNMDBFLM_01529 2.5e-138 cobK 1.3.1.106, 1.3.1.54, 2.1.1.195 H Precorrin-6x reductase CbiJ/CobK
BNMDBFLM_01530 3e-262 cobA 2.1.1.107, 4.2.1.75 H Tetrapyrrole (Corrin/Porphyrin) Methylases
BNMDBFLM_01531 2.3e-147 cbiK 4.99.1.3 H Cobalt chelatase (CbiK)
BNMDBFLM_01532 6e-126 cobI 2.1.1.130, 2.1.1.151, 4.99.1.3 H Tetrapyrrole (Corrin/Porphyrin) Methylases
BNMDBFLM_01533 2.4e-133 cbiM P Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import
BNMDBFLM_01534 8.7e-53 cbiN P Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import
BNMDBFLM_01535 4.4e-118 cbiQ P Cobalt transport protein
BNMDBFLM_01536 2e-149 cbiO 2.1.1.195 P part of an ABC transporter complex. Responsible for energy coupling to the transport system
BNMDBFLM_01537 3.3e-283 cobQ 6.3.5.10 H Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
BNMDBFLM_01538 3.2e-80 cysG 1.3.1.76, 4.99.1.4 H Putative NAD(P)-binding
BNMDBFLM_01539 1.4e-237 hemA 1.2.1.70 H Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
BNMDBFLM_01540 2.3e-170 hemC 2.1.1.107, 2.5.1.61, 4.2.1.75 H Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps
BNMDBFLM_01541 2.4e-181 hemB 4.2.1.24 H Delta-aminolevulinic acid dehydratase
BNMDBFLM_01542 3.4e-252 hemL 5.4.3.8 H Aminotransferase class-III
BNMDBFLM_01543 1.6e-103 cobU 2.7.1.156, 2.7.7.62, 6.3.5.10 H Cobinamide kinase / cobinamide phosphate guanyltransferase
BNMDBFLM_01544 4.8e-137 cobS 2.7.8.26 H Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
BNMDBFLM_01545 5.4e-112 gpm 3.1.3.73, 5.4.2.12 G Belongs to the phosphoglycerate mutase family
BNMDBFLM_01546 7.3e-132 hemD 2.1.1.107, 4.2.1.75 H Uroporphyrinogen-III synthase
BNMDBFLM_01547 5.9e-194 cobT 2.4.2.21, 6.3.5.11, 6.3.5.9 F Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB)
BNMDBFLM_01548 2.5e-62 S Domain of unknown function (DUF4430)
BNMDBFLM_01549 1.2e-81 S ECF transporter, substrate-specific component
BNMDBFLM_01550 2.9e-190 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BNMDBFLM_01551 4.8e-310 lmrA V ABC transporter, ATP-binding protein
BNMDBFLM_01552 0.0 yfiC V ABC transporter
BNMDBFLM_01553 1.2e-285 pipD E Dipeptidase
BNMDBFLM_01554 4.2e-89 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
BNMDBFLM_01555 4.3e-135 gntR K UbiC transcription regulator-associated domain protein
BNMDBFLM_01556 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
BNMDBFLM_01557 9.2e-169 yvgN C Aldo keto reductase
BNMDBFLM_01558 3.5e-137 puuD S peptidase C26
BNMDBFLM_01559 1.4e-220 patA 2.6.1.1 E Aminotransferase
BNMDBFLM_01560 7.7e-208 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
BNMDBFLM_01561 1.9e-62 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
BNMDBFLM_01562 1.9e-175 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
BNMDBFLM_01563 1.3e-70 O Preprotein translocase subunit SecB
BNMDBFLM_01564 1.9e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
BNMDBFLM_01565 7.4e-204 XK27_09615 S reductase
BNMDBFLM_01566 2.9e-102 nqr 1.5.1.36 S reductase
BNMDBFLM_01568 1.3e-268 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BNMDBFLM_01569 1.5e-183 K Transcriptional regulator, LacI family
BNMDBFLM_01570 5.5e-261 G Major Facilitator
BNMDBFLM_01571 1.9e-211 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
BNMDBFLM_01572 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
BNMDBFLM_01573 2.3e-267 G Major Facilitator
BNMDBFLM_01574 0.0 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
BNMDBFLM_01575 0.0 M domain protein
BNMDBFLM_01576 2.7e-277 tagE2 2.4.1.52 GT4 M Poly(Glycerol-phosphate) alpha-glucosyltransferase
BNMDBFLM_01577 2e-275 tagE3 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
BNMDBFLM_01578 2.2e-72
BNMDBFLM_01579 1.7e-73 K Transcriptional regulator, TetR family
BNMDBFLM_01580 3.3e-13 K Transcriptional regulator, TetR family
BNMDBFLM_01581 5.5e-248 steT_1 E amino acid
BNMDBFLM_01582 6.4e-139 puuD S peptidase C26
BNMDBFLM_01583 1e-81 tlpA2 L Transposase IS200 like
BNMDBFLM_01584 4e-242 L transposase, IS605 OrfB family
BNMDBFLM_01586 2.6e-89 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
BNMDBFLM_01587 2.6e-90
BNMDBFLM_01588 1.2e-35 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BNMDBFLM_01589 4.3e-59 MA20_14895 S Conserved hypothetical protein 698
BNMDBFLM_01590 7.6e-97 S NADPH-dependent FMN reductase
BNMDBFLM_01591 2.7e-171 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
BNMDBFLM_01592 3.2e-43 E Arginine ornithine antiporter
BNMDBFLM_01593 8.4e-223 arcT 2.6.1.1 E Aminotransferase
BNMDBFLM_01594 1.7e-167 map 3.4.11.18 E Methionine Aminopeptidase
BNMDBFLM_01595 1e-148 S Hydrolases of the alpha beta superfamily
BNMDBFLM_01601 4.3e-115 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
BNMDBFLM_01602 3.7e-145 arcC 2.7.2.2 E Belongs to the carbamate kinase family
BNMDBFLM_01603 3.2e-164 EG EamA-like transporter family
BNMDBFLM_01604 2e-103 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
BNMDBFLM_01605 6.7e-40 S dextransucrase activity
BNMDBFLM_01606 3.6e-45 L PFAM Integrase catalytic region
BNMDBFLM_01607 4.7e-44 L hmm pf00665
BNMDBFLM_01608 4e-186 yxbA 6.3.1.12 S ATP-grasp enzyme
BNMDBFLM_01609 3e-44 yxbA 6.3.1.12 S ATP-grasp enzyme
BNMDBFLM_01610 4.8e-293 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BNMDBFLM_01611 0.0 asnB 6.3.5.4 E Asparagine synthase
BNMDBFLM_01612 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
BNMDBFLM_01613 7.1e-256 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BNMDBFLM_01614 4.1e-136 jag S R3H domain protein
BNMDBFLM_01615 4.5e-130 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
BNMDBFLM_01616 1.2e-58 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
BNMDBFLM_01617 3.4e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
BNMDBFLM_01618 2.2e-251 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BNMDBFLM_01619 2.9e-207 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
BNMDBFLM_01620 1.7e-34 yaaA S S4 domain protein YaaA
BNMDBFLM_01621 1.1e-206 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BNMDBFLM_01622 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BNMDBFLM_01623 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BNMDBFLM_01624 1.2e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
BNMDBFLM_01625 7.5e-79 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
BNMDBFLM_01626 1.6e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BNMDBFLM_01627 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
BNMDBFLM_01628 2e-74 rplI J Binds to the 23S rRNA
BNMDBFLM_01629 1.8e-235 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
BNMDBFLM_01630 6.9e-207 yttB EGP Major facilitator Superfamily
BNMDBFLM_01631 1.5e-60
BNMDBFLM_01632 9.2e-258 npp S type I phosphodiesterase nucleotide pyrophosphatase
BNMDBFLM_01633 4.9e-111 yxiO S Vacuole effluxer Atg22 like
BNMDBFLM_01635 3.3e-40
BNMDBFLM_01636 1e-43
BNMDBFLM_01637 4.2e-217 folP 2.5.1.15 H dihydropteroate synthase
BNMDBFLM_01638 6e-85 xtp 2.5.1.15, 3.6.1.66 F Ham1 family
BNMDBFLM_01639 2.1e-296 L Transposase IS66 family
BNMDBFLM_01640 1.6e-66 XK27_01125 L PFAM IS66 Orf2 family protein

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)