ORF_ID e_value Gene_name EC_number CAZy COGs Description
EKDOCJBM_00002 6.3e-39 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
EKDOCJBM_00003 6.2e-97 ypmS S Protein conserved in bacteria
EKDOCJBM_00004 1.4e-161 ypmR E COG2755 Lysophospholipase L1 and related esterases
EKDOCJBM_00005 9.3e-150 DegV S DegV family
EKDOCJBM_00006 4.6e-302 recN L May be involved in recombinational repair of damaged DNA
EKDOCJBM_00007 8.3e-73 argR K Regulates arginine biosynthesis genes
EKDOCJBM_00008 4.2e-147 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
EKDOCJBM_00009 1.7e-154 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
EKDOCJBM_00010 3.5e-29 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
EKDOCJBM_00011 8.6e-235 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
EKDOCJBM_00012 1.8e-06 KT response to antibiotic
EKDOCJBM_00013 2.9e-119 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
EKDOCJBM_00014 1.1e-124 dnaD
EKDOCJBM_00015 9.3e-183 metA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
EKDOCJBM_00016 1.9e-92 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
EKDOCJBM_00018 0.0 recJ L Single-strand DNA-specific exonuclease, C terminal domain
EKDOCJBM_00019 2.1e-67 GnaT 2.5.1.16 K acetyltransferase
EKDOCJBM_00020 6.2e-131 Q Methyltransferase domain
EKDOCJBM_00021 1.3e-137 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
EKDOCJBM_00022 2.7e-174 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
EKDOCJBM_00023 1.2e-112 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
EKDOCJBM_00024 7.1e-223 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
EKDOCJBM_00025 1.9e-227 rodA D Belongs to the SEDS family
EKDOCJBM_00026 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
EKDOCJBM_00027 3.1e-78 typA T GTP-binding protein TypA
EKDOCJBM_00029 2.3e-251 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
EKDOCJBM_00030 1.9e-200 murG 2.4.1.227 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
EKDOCJBM_00031 2.2e-133 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
EKDOCJBM_00032 7.1e-224 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
EKDOCJBM_00033 1.7e-238 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
EKDOCJBM_00034 2.1e-123 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
EKDOCJBM_00035 3.2e-101 sepF D cell septum assembly
EKDOCJBM_00036 6.5e-30 yggT D integral membrane protein
EKDOCJBM_00037 2.7e-143 ylmH S conserved protein, contains S4-like domain
EKDOCJBM_00038 8.4e-138 divIVA D Cell division initiation protein
EKDOCJBM_00039 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
EKDOCJBM_00040 3.8e-184 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
EKDOCJBM_00041 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
EKDOCJBM_00042 2.9e-34 nrdH O Glutaredoxin
EKDOCJBM_00043 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
EKDOCJBM_00044 2.5e-211 citZ 2.3.3.1 C Belongs to the citrate synthase family
EKDOCJBM_00045 3.9e-223 icd 1.1.1.42 C Isocitrate dehydrogenase
EKDOCJBM_00046 5.1e-38 ptsH G phosphocarrier protein Hpr
EKDOCJBM_00047 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
EKDOCJBM_00048 1.8e-186 D nuclear chromosome segregation
EKDOCJBM_00049 3.7e-137 yejC S cyclic nucleotide-binding protein
EKDOCJBM_00050 7e-164 rapZ S Displays ATPase and GTPase activities
EKDOCJBM_00051 4.3e-183 ybhK S Required for morphogenesis under gluconeogenic growth conditions
EKDOCJBM_00052 5.7e-161 whiA K May be required for sporulation
EKDOCJBM_00053 3.9e-278 pepD E Dipeptidase
EKDOCJBM_00054 5.8e-149 XK27_10720 D peptidase activity
EKDOCJBM_00055 5.6e-294 adcA P Belongs to the bacterial solute-binding protein 9 family
EKDOCJBM_00056 2.6e-09
EKDOCJBM_00058 5.5e-173 yeiH S Membrane
EKDOCJBM_00059 2e-129 mur1 3.4.17.14, 3.5.1.28 NU muramidase
EKDOCJBM_00060 7.6e-166 cpsY K Transcriptional regulator
EKDOCJBM_00061 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
EKDOCJBM_00062 2.5e-58 phnA P Alkylphosphonate utilization operon protein PhnA
EKDOCJBM_00063 1.4e-105 artQ P ABC transporter (Permease
EKDOCJBM_00064 4.8e-111 glnQ 3.6.3.21 E abc transporter atp-binding protein
EKDOCJBM_00065 4.6e-157 aatB ET ABC transporter substrate-binding protein
EKDOCJBM_00066 2.2e-268 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
EKDOCJBM_00067 2.6e-51
EKDOCJBM_00068 2.1e-45
EKDOCJBM_00069 3e-187 adhP 1.1.1.1 C alcohol dehydrogenase
EKDOCJBM_00070 2.2e-102 rimL J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
EKDOCJBM_00071 3.4e-177 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
EKDOCJBM_00073 3.7e-25
EKDOCJBM_00074 3.9e-173 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
EKDOCJBM_00075 2.4e-45 ftsL D cell division protein FtsL
EKDOCJBM_00076 0.0 ftsI 3.4.16.4 M penicillin-binding protein
EKDOCJBM_00077 1.8e-184 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
EKDOCJBM_00078 2.1e-220 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
EKDOCJBM_00080 1.3e-260 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
EKDOCJBM_00081 1.7e-62 yutD J protein conserved in bacteria
EKDOCJBM_00082 1.8e-223 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
EKDOCJBM_00083 6.1e-91 XK27_09885 V Glycopeptide antibiotics resistance protein
EKDOCJBM_00085 0.0 mdlA V abc transporter atp-binding protein
EKDOCJBM_00086 0.0 mdlB V abc transporter atp-binding protein
EKDOCJBM_00092 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
EKDOCJBM_00093 2e-105 mesE M Transport protein ComB
EKDOCJBM_00095 1.2e-215 blpH 2.7.13.3 T signal transduction protein with a C-terminal ATPase domain
EKDOCJBM_00096 1.6e-129 agrA KT LytTr DNA-binding domain
EKDOCJBM_00097 4.6e-25 WQ51_00785
EKDOCJBM_00098 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
EKDOCJBM_00099 2.3e-215 ywbD 2.1.1.191 J Methyltransferase
EKDOCJBM_00100 5.8e-118 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
EKDOCJBM_00101 1.2e-160 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
EKDOCJBM_00102 5.4e-203 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
EKDOCJBM_00103 6.4e-218 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
EKDOCJBM_00104 2e-205 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
EKDOCJBM_00105 4.2e-53 yheA S Belongs to the UPF0342 family
EKDOCJBM_00106 7e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
EKDOCJBM_00107 6.4e-235 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
EKDOCJBM_00108 2.7e-77 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
EKDOCJBM_00109 1.4e-153 pheA 4.2.1.51 E Prephenate dehydratase
EKDOCJBM_00110 8.3e-244 msrR K Transcriptional regulator
EKDOCJBM_00111 5.3e-154 ydiA P C4-dicarboxylate transporter malic acid transport protein
EKDOCJBM_00112 4.2e-200 I acyl-CoA dehydrogenase
EKDOCJBM_00113 2e-97 mip S hydroperoxide reductase activity
EKDOCJBM_00114 5e-254 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
EKDOCJBM_00115 5.1e-78 P Mediates zinc uptake. May also transport other divalent cations
EKDOCJBM_00116 2.4e-51 zupT P Mediates zinc uptake. May also transport other divalent cations
EKDOCJBM_00117 1.6e-61 smtB K Transcriptional regulator
EKDOCJBM_00118 0.0 cadA 3.6.3.3, 3.6.3.5 P COG2217 Cation transport ATPase
EKDOCJBM_00119 4.4e-233 GT4 M transferase activity, transferring glycosyl groups
EKDOCJBM_00120 5e-221 M Psort location CytoplasmicMembrane, score
EKDOCJBM_00121 0.0 rgpF GT2,GT4 M Glycosyltransferase like family 2
EKDOCJBM_00122 4.1e-117
EKDOCJBM_00123 1.5e-149 2.4.1.60 S Glycosyltransferase group 2 family protein
EKDOCJBM_00124 1.9e-43 S Uncharacterized conserved protein (DUF2304)
EKDOCJBM_00125 7e-127 arnC M group 2 family protein
EKDOCJBM_00126 7.8e-177 cpsIaJ S Glycosyltransferase like family 2
EKDOCJBM_00127 6.3e-155 M Glycosyltransferase, group 2 family protein
EKDOCJBM_00128 1.3e-227 amrA S membrane protein involved in the export of O-antigen and teichoic acid
EKDOCJBM_00129 1.2e-160 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
EKDOCJBM_00130 4.3e-267 S Glucosyl transferase GtrII
EKDOCJBM_00131 3.6e-171 yfdH GT2 M COG0463, glycosyltransferases involved in cell wall biogenesis
EKDOCJBM_00132 3.4e-55 yitW K metal-sulfur cluster biosynthetic enzyme
EKDOCJBM_00133 4e-201 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
EKDOCJBM_00134 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
EKDOCJBM_00135 1.9e-33 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
EKDOCJBM_00136 3.2e-20 rpsU J Belongs to the bacterial ribosomal protein bS21 family
EKDOCJBM_00137 1.9e-136 gltS ET Belongs to the bacterial solute-binding protein 3 family
EKDOCJBM_00138 1.1e-211 arcT 2.6.1.1 E Aminotransferase
EKDOCJBM_00139 3.4e-241 purD 6.3.4.13 F Belongs to the GARS family
EKDOCJBM_00140 9e-81 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
EKDOCJBM_00141 3.3e-200 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
EKDOCJBM_00142 2.1e-174 1.1.1.169 H Ketopantoate reductase
EKDOCJBM_00143 3.2e-11
EKDOCJBM_00144 2.9e-36
EKDOCJBM_00146 9.6e-247 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
EKDOCJBM_00147 0.0 argS 6.1.1.19 J Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
EKDOCJBM_00148 3.1e-69 argR K Regulates arginine biosynthesis genes
EKDOCJBM_00149 1.9e-56 ymcA 3.6.3.21 S Belongs to the UPF0342 family
EKDOCJBM_00150 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
EKDOCJBM_00151 1.9e-77 S Protein of unknown function (DUF3021)
EKDOCJBM_00152 2.4e-69 K LytTr DNA-binding domain
EKDOCJBM_00154 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
EKDOCJBM_00156 3e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
EKDOCJBM_00157 2.2e-107 tag 3.2.2.20 L 3-methyladenine DNA glycosylase
EKDOCJBM_00158 5e-232 cinA 3.5.1.42 S Belongs to the CinA family
EKDOCJBM_00159 6.1e-205 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
EKDOCJBM_00160 4.3e-107 drgA C Nitroreductase family
EKDOCJBM_00161 2.5e-100 yoaK S Protein of unknown function (DUF1275)
EKDOCJBM_00162 1.2e-157 yvgN C reductase
EKDOCJBM_00163 1.4e-209 S Tetratricopeptide repeat
EKDOCJBM_00164 0.0 lacL 3.2.1.23 G -beta-galactosidase
EKDOCJBM_00165 0.0 lacS G transporter
EKDOCJBM_00166 1.1e-200 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
EKDOCJBM_00167 8.6e-195 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
EKDOCJBM_00168 4.6e-285 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
EKDOCJBM_00169 1.8e-220 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
EKDOCJBM_00170 9.2e-152 galR K Transcriptional regulator
EKDOCJBM_00171 6e-307 dexB 3.2.1.10, 3.2.1.70 GH13 G COG0366 Glycosidases
EKDOCJBM_00172 5.5e-226 vncS 2.7.13.3 T Histidine kinase
EKDOCJBM_00173 7.8e-112 K Response regulator receiver domain protein
EKDOCJBM_00174 2.9e-67 vex3 V Efflux ABC transporter, permease protein
EKDOCJBM_00175 1.4e-282 S Psort location CytoplasmicMembrane, score
EKDOCJBM_00176 4.6e-70 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
EKDOCJBM_00177 1.3e-73 K DNA-binding transcription factor activity
EKDOCJBM_00178 0.0 lmrA1 V abc transporter atp-binding protein
EKDOCJBM_00179 0.0 lmrA2 V abc transporter atp-binding protein
EKDOCJBM_00180 1.8e-113 K Acetyltransferase (GNAT) family
EKDOCJBM_00181 1.1e-112 2.7.6.5 S Region found in RelA / SpoT proteins
EKDOCJBM_00182 4.9e-117 T response regulator
EKDOCJBM_00183 1.8e-215 sptS 2.7.13.3 T Histidine kinase
EKDOCJBM_00184 1.7e-131 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
EKDOCJBM_00185 6.4e-91 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
EKDOCJBM_00186 2.2e-159 cvfB S Protein conserved in bacteria
EKDOCJBM_00187 3.7e-34 yozE S Belongs to the UPF0346 family
EKDOCJBM_00188 6.2e-134 sip M LysM domain protein
EKDOCJBM_00189 2.8e-191 phoH T phosphate starvation-inducible protein PhoH
EKDOCJBM_00194 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EKDOCJBM_00195 3.8e-128 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
EKDOCJBM_00196 3.2e-220 vicK 2.7.13.3 T Histidine kinase
EKDOCJBM_00197 1.3e-153 vicX 3.1.26.11 S Metal-dependent hydrolases of the beta-lactamase superfamily I
EKDOCJBM_00198 8.7e-57 S Protein of unknown function (DUF454)
EKDOCJBM_00199 1.6e-206 murM 2.3.2.10, 2.3.2.16 V protein involved in methicillin resistance
EKDOCJBM_00200 2e-146 yidA S hydrolases of the HAD superfamily
EKDOCJBM_00201 1.7e-159 XK27_00115 2.3.1.128 K Acetyltransferase GNAT family
EKDOCJBM_00202 1.9e-68 XK27_00120 2.4.2.3 F Phosphorylase superfamily
EKDOCJBM_00203 1.1e-19 XK27_00120 2.4.2.3 F Phosphorylase superfamily
EKDOCJBM_00204 5.3e-68 ywiB S Domain of unknown function (DUF1934)
EKDOCJBM_00205 0.0 pacL 3.6.3.8 P cation transport ATPase
EKDOCJBM_00206 1.6e-132 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
EKDOCJBM_00207 1.1e-155 yjjH S Calcineurin-like phosphoesterase
EKDOCJBM_00208 1e-201 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
EKDOCJBM_00209 5.7e-183 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
EKDOCJBM_00210 3.2e-124 ftsE D cell division ATP-binding protein FtsE
EKDOCJBM_00211 7.3e-164 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
EKDOCJBM_00212 1.9e-91 mutX 3.6.1.55 F NTP pyrophosphohydrolases including oxidative damage repair enzymes
EKDOCJBM_00213 1.6e-176 yubA S permease
EKDOCJBM_00214 2.4e-223 G COG0457 FOG TPR repeat
EKDOCJBM_00215 0.0 M family 8
EKDOCJBM_00216 1.9e-110 cutC P Participates in the control of copper homeostasis
EKDOCJBM_00217 3e-96 XK27_08140 K Bacterial regulatory proteins, tetR family
EKDOCJBM_00218 3.2e-150 yitS S EDD domain protein, DegV family
EKDOCJBM_00219 5.9e-203 yeaN P transporter
EKDOCJBM_00220 2.6e-132 S Domain of unknown function (DUF4336)
EKDOCJBM_00221 9.5e-141 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
EKDOCJBM_00222 1.3e-165 aph 2.7.11.1 KLT Aminoglycoside phosphotransferase
EKDOCJBM_00223 1.7e-105 3.4.13.21, 3.4.15.6 E Belongs to the peptidase S51 family
EKDOCJBM_00224 3.6e-151 cnrT EG EamA-like transporter family
EKDOCJBM_00225 1.1e-50 K TfoX N-terminal domain
EKDOCJBM_00226 1.5e-88 XK27_05370 5.3.1.24 E phosphoribosylanthranilate isomerase activity
EKDOCJBM_00227 9.8e-127 S CAAX amino terminal protease family protein
EKDOCJBM_00228 1.7e-291 V ABC transporter transmembrane region
EKDOCJBM_00229 4.6e-129 bcrA V abc transporter atp-binding protein
EKDOCJBM_00230 7.7e-116 S ABC-type transport system involved in multi-copper enzyme maturation, permease component
EKDOCJBM_00231 3.4e-112 K Bacterial regulatory proteins, tetR family
EKDOCJBM_00232 6.9e-86 3.4.13.21, 3.4.15.6 E Belongs to the peptidase S51 family
EKDOCJBM_00233 2.8e-78 aacA7 2.3.1.82 K Acetyltransferase (GNAT) family
EKDOCJBM_00234 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
EKDOCJBM_00235 2e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
EKDOCJBM_00236 5.7e-236 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
EKDOCJBM_00237 4.5e-236 XK27_09285 3.5.2.6 V Beta-lactamase enzyme family
EKDOCJBM_00239 3e-60 divIC D Septum formation initiator
EKDOCJBM_00240 6.3e-39 yabO J Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
EKDOCJBM_00241 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
EKDOCJBM_00242 2e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
EKDOCJBM_00243 1.1e-203 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
EKDOCJBM_00244 1.1e-29 yyzM S Protein conserved in bacteria
EKDOCJBM_00245 7.2e-198 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
EKDOCJBM_00246 1.1e-256 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
EKDOCJBM_00247 2.6e-135 parB K Belongs to the ParB family
EKDOCJBM_00248 9.2e-207 htrA 3.4.21.107 O Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain'
EKDOCJBM_00249 8e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
EKDOCJBM_00250 6.2e-120 yoaK S Protein of unknown function (DUF1275)
EKDOCJBM_00254 3.5e-166 ppaC 3.6.1.1 C inorganic pyrophosphatase
EKDOCJBM_00255 1.4e-107 S Domain of unknown function (DUF1803)
EKDOCJBM_00256 7.8e-102 ygaC J Belongs to the UPF0374 family
EKDOCJBM_00257 2e-138 recX 2.4.1.337 GT4 S Regulatory protein RecX
EKDOCJBM_00258 7.7e-247 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
EKDOCJBM_00259 3e-192 asnA 6.3.1.1 E aspartate--ammonia ligase
EKDOCJBM_00260 2.4e-256 lysC 2.7.2.4 E Belongs to the aspartokinase family
EKDOCJBM_00261 2.8e-114 S HAD hydrolase, family IA, variant 3
EKDOCJBM_00262 2.1e-140 phaB 5.3.3.14, 5.3.3.18 I Belongs to the enoyl-CoA hydratase isomerase family
EKDOCJBM_00263 5.2e-72 marR K Transcriptional regulator, MarR family
EKDOCJBM_00264 1.9e-170 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
EKDOCJBM_00265 3.3e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
EKDOCJBM_00266 7.5e-172 fabK 1.3.1.9 S 2-Nitropropane dioxygenase
EKDOCJBM_00267 4.8e-160 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
EKDOCJBM_00268 1.8e-125 IQ reductase
EKDOCJBM_00269 2.6e-233 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
EKDOCJBM_00270 5.6e-54 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
EKDOCJBM_00271 1.5e-71 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
EKDOCJBM_00272 5.4e-256 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
EKDOCJBM_00273 0.0 3.2.1.26, 3.2.1.65 GH32 G Belongs to the glycosyl hydrolase 32 family
EKDOCJBM_00274 0.0 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 G Belongs to the glycosyl hydrolase 68 family
EKDOCJBM_00275 5.7e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
EKDOCJBM_00276 1.1e-104 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
EKDOCJBM_00277 1.4e-72 ylbF S Belongs to the UPF0342 family
EKDOCJBM_00278 1.9e-46 ylbG S UPF0298 protein
EKDOCJBM_00279 1.1e-212 livJ E COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component
EKDOCJBM_00280 4.2e-145 livH E Belongs to the binding-protein-dependent transport system permease family
EKDOCJBM_00281 4.9e-139 livM E Belongs to the binding-protein-dependent transport system permease family
EKDOCJBM_00282 3.1e-136 livG E COG0411 ABC-type branched-chain amino acid transport systems, ATPase component
EKDOCJBM_00283 1.6e-123 livF E COG0410 ABC-type branched-chain amino acid transport systems, ATPase component
EKDOCJBM_00284 3e-111 acuB S CBS domain
EKDOCJBM_00285 6.3e-168 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
EKDOCJBM_00286 2.9e-108 yvyE 3.4.13.9 S YigZ family
EKDOCJBM_00287 1.6e-249 comFA L Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
EKDOCJBM_00288 7.7e-83 comFC K competence protein
EKDOCJBM_00289 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
EKDOCJBM_00290 1.6e-275 M Putative cell wall binding repeat
EKDOCJBM_00291 1.1e-302 S dextransucrase activity
EKDOCJBM_00292 0.0 S dextransucrase activity
EKDOCJBM_00293 0.0 S dextransucrase activity
EKDOCJBM_00295 1.4e-117 XK27_00785 S CAAX protease self-immunity
EKDOCJBM_00296 6.4e-233 EGP Major facilitator Superfamily
EKDOCJBM_00297 1.9e-63 rmaI K Transcriptional regulator, MarR family
EKDOCJBM_00298 8.2e-94 maa 2.3.1.79 GK Maltose O-acetyltransferase
EKDOCJBM_00299 6.3e-134 S N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity
EKDOCJBM_00300 4.4e-239 3.5.1.28 M domain protein
EKDOCJBM_00301 5.9e-217 L the current gene model (or a revised gene model) may contain a frame shift
EKDOCJBM_00302 2.1e-246 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
EKDOCJBM_00303 3.1e-75 yueI S Protein of unknown function (DUF1694)
EKDOCJBM_00304 2.9e-199 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
EKDOCJBM_00305 1.8e-198 yyaQ S YjbR
EKDOCJBM_00306 2.4e-181 ccpA K Catabolite control protein A
EKDOCJBM_00307 2.4e-195 pepQ 3.4.13.9 E Belongs to the peptidase M24B family
EKDOCJBM_00308 1.3e-63 yugI 5.3.1.9 J RNA binding protein, contains ribosomal protein S1 domain
EKDOCJBM_00309 8.2e-276 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
EKDOCJBM_00310 6.6e-81 smpB O the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
EKDOCJBM_00311 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
EKDOCJBM_00312 2e-33 secG U Preprotein translocase subunit SecG
EKDOCJBM_00313 2.2e-221 mdtG EGP Major facilitator Superfamily
EKDOCJBM_00314 5.1e-102 coaE 2.7.1.24, 3.2.2.23, 4.2.99.18 GH23 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
EKDOCJBM_00315 1e-148 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
EKDOCJBM_00316 2.3e-87 sigH K DNA-templated transcription, initiation
EKDOCJBM_00317 3.4e-138 ykuT M mechanosensitive ion channel
EKDOCJBM_00318 5.2e-229 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
EKDOCJBM_00319 1.3e-70 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
EKDOCJBM_00320 5.8e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
EKDOCJBM_00321 3.8e-84 XK27_03960 S Protein of unknown function (DUF3013)
EKDOCJBM_00322 1.1e-77 mutT3 3.6.1.13, 3.6.1.55 L NUDIX domain
EKDOCJBM_00323 2.5e-83 XK27_02675 K Acetyltransferase GNAT Family
EKDOCJBM_00324 2.6e-177 prmA J Ribosomal protein L11 methyltransferase
EKDOCJBM_00325 3.4e-132 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
EKDOCJBM_00326 0.0 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
EKDOCJBM_00327 9.1e-83 nrdI F Belongs to the NrdI family
EKDOCJBM_00328 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
EKDOCJBM_00329 2.2e-73 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
EKDOCJBM_00330 1.2e-118 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
EKDOCJBM_00331 2e-26
EKDOCJBM_00332 1e-96 nudF 3.6.1.13 L AdP-ribose pyrophosphatase
EKDOCJBM_00333 2.4e-248 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
EKDOCJBM_00334 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
EKDOCJBM_00335 1.8e-184 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
EKDOCJBM_00336 3.6e-161 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
EKDOCJBM_00337 5e-168 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
EKDOCJBM_00338 1.4e-135 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
EKDOCJBM_00339 8.5e-99 GBS0088 J protein conserved in bacteria
EKDOCJBM_00340 6e-143 S Macro domain protein
EKDOCJBM_00341 6.3e-51 trxA O Belongs to the thioredoxin family
EKDOCJBM_00342 7.2e-74 yccU S CoA-binding protein
EKDOCJBM_00343 6.6e-145 tatD L Hydrolase, tatd
EKDOCJBM_00344 2.9e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
EKDOCJBM_00345 4.4e-155 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
EKDOCJBM_00347 4e-164 rsgA 3.1.3.100 G One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
EKDOCJBM_00348 7.8e-120 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
EKDOCJBM_00349 1.1e-118 thiN 2.7.6.2 H thiamine pyrophosphokinase
EKDOCJBM_00350 1.4e-170 rmuC S RmuC domain protein
EKDOCJBM_00351 1.2e-177 cbf S 3'-5' exoribonuclease yhaM
EKDOCJBM_00352 1.2e-141 purR 2.4.2.7 F operon repressor
EKDOCJBM_00353 2.3e-69 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
EKDOCJBM_00354 3.9e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
EKDOCJBM_00355 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
EKDOCJBM_00356 7.9e-188 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
EKDOCJBM_00357 4.5e-208 malX G ABC transporter
EKDOCJBM_00358 9.7e-250 malF P ABC transporter (Permease
EKDOCJBM_00359 9.8e-152 malG P ABC transporter (Permease
EKDOCJBM_00360 3e-212 msmX P Belongs to the ABC transporter superfamily
EKDOCJBM_00361 3.9e-24 tatA U protein secretion
EKDOCJBM_00362 5.4e-119 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
EKDOCJBM_00363 2.7e-286 ywbL P COG0672 High-affinity Fe2 Pb2 permease
EKDOCJBM_00364 5.3e-231 ycdB P peroxidase
EKDOCJBM_00365 9.3e-145 ycdO P periplasmic lipoprotein involved in iron transport
EKDOCJBM_00366 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
EKDOCJBM_00367 6.2e-179 pyrD 1.3.1.14, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate
EKDOCJBM_00368 2.1e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
EKDOCJBM_00369 5.5e-289 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
EKDOCJBM_00370 2.5e-189 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
EKDOCJBM_00371 5.6e-277 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
EKDOCJBM_00372 1.1e-112 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
EKDOCJBM_00373 0.0 dnaE 2.7.7.7 L DNA polymerase
EKDOCJBM_00374 2.1e-188 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
EKDOCJBM_00375 2.7e-277 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
EKDOCJBM_00377 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
EKDOCJBM_00378 2.9e-208 XK27_05110 P Chloride transporter ClC family
EKDOCJBM_00379 1.2e-37 pheA 1.3.1.12, 2.3.1.79, 4.2.1.51, 5.4.99.5 E Chorismate mutase
EKDOCJBM_00380 8.6e-279 clcA P Chloride transporter, ClC family
EKDOCJBM_00381 3.9e-75 fld C Flavodoxin
EKDOCJBM_00382 2.2e-18 XK27_08880
EKDOCJBM_00383 1e-125 XK27_08875 O Zinc-dependent metalloprotease
EKDOCJBM_00384 4.7e-148 estA CE1 S Esterase
EKDOCJBM_00385 2.1e-310 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
EKDOCJBM_00386 3.1e-136 XK27_08845 S abc transporter atp-binding protein
EKDOCJBM_00387 1.3e-146 XK27_08840 S Belongs to the binding-protein-dependent transport system permease family
EKDOCJBM_00388 4.3e-178 XK27_08835 S ABC transporter substrate binding protein
EKDOCJBM_00389 3.8e-18 S Domain of unknown function (DUF4649)
EKDOCJBM_00390 9.5e-83 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
EKDOCJBM_00391 1.5e-42 S Sugar efflux transporter for intercellular exchange
EKDOCJBM_00392 5.4e-201 P FtsX-like permease family
EKDOCJBM_00393 1.7e-122 V abc transporter atp-binding protein
EKDOCJBM_00394 1.1e-96 K WHG domain
EKDOCJBM_00395 1.7e-168 ydhF S Aldo keto reductase
EKDOCJBM_00396 1.6e-211 natB CP ABC-type Na efflux pump, permease component
EKDOCJBM_00397 3.3e-161 natA S abc transporter atp-binding protein
EKDOCJBM_00398 1.7e-07 S Protein of unknown function (DUF3169)
EKDOCJBM_00399 9.4e-27 XK27_07105 K transcriptional
EKDOCJBM_00400 1.4e-39
EKDOCJBM_00401 4.3e-109 XK27_02070 S nitroreductase
EKDOCJBM_00402 3.8e-143 1.13.11.2 S glyoxalase
EKDOCJBM_00403 3.7e-73 ywnA K Transcriptional regulator
EKDOCJBM_00404 3.6e-157 E Alpha/beta hydrolase of unknown function (DUF915)
EKDOCJBM_00405 8.9e-130 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
EKDOCJBM_00406 8.1e-30 acpP1 IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
EKDOCJBM_00407 1.1e-181 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
EKDOCJBM_00408 1.6e-140 recO L Involved in DNA repair and RecF pathway recombination
EKDOCJBM_00409 5.5e-217 araT 2.6.1.1 E Aminotransferase
EKDOCJBM_00410 9.5e-175 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
EKDOCJBM_00411 4.3e-88 usp 3.5.1.28 CBM50 S CHAP domain
EKDOCJBM_00412 7.2e-84 mreD M rod shape-determining protein MreD
EKDOCJBM_00413 1.2e-106 mreC M Involved in formation and maintenance of cell shape
EKDOCJBM_00418 3.5e-280 opuD M Belongs to the BCCT transporter (TC 2.A.15) family
EKDOCJBM_00419 4.8e-279 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
EKDOCJBM_00420 1.1e-89 pat 2.3.1.183 M acetyltransferase
EKDOCJBM_00421 4.8e-293 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
EKDOCJBM_00423 3.6e-199 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
EKDOCJBM_00424 1.5e-172 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
EKDOCJBM_00425 2.5e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
EKDOCJBM_00426 5.8e-285 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
EKDOCJBM_00427 4.9e-39 S granule-associated protein
EKDOCJBM_00428 8.8e-287 S unusual protein kinase
EKDOCJBM_00429 2.9e-100 estA E Lysophospholipase L1 and related esterases
EKDOCJBM_00430 6.7e-156 rssA S Phospholipase, patatin family
EKDOCJBM_00431 2.7e-175 dacA1 3.4.16.4 M Belongs to the peptidase S11 family
EKDOCJBM_00432 4.4e-250 dacA1 3.4.16.4 M Belongs to the peptidase S11 family
EKDOCJBM_00433 2.9e-196 yeaB K Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
EKDOCJBM_00434 3.2e-113 phoU P Plays a role in the regulation of phosphate uptake
EKDOCJBM_00435 3.9e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
EKDOCJBM_00436 1.5e-149 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
EKDOCJBM_00437 9.1e-156 pstA P phosphate transport system permease
EKDOCJBM_00438 2.1e-155 pstC P probably responsible for the translocation of the substrate across the membrane
EKDOCJBM_00439 5.8e-155 pstS P phosphate
EKDOCJBM_00440 1.8e-245 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
EKDOCJBM_00441 5.5e-141 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
EKDOCJBM_00442 1e-44 yktA S Belongs to the UPF0223 family
EKDOCJBM_00443 7.9e-70 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
EKDOCJBM_00444 2e-97 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
EKDOCJBM_00445 1.1e-75 S dextransucrase activity
EKDOCJBM_00446 1.4e-236 tcdB S dextransucrase activity
EKDOCJBM_00447 0.0 S dextransucrase activity
EKDOCJBM_00448 4.6e-103 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
EKDOCJBM_00449 2.4e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
EKDOCJBM_00450 1.7e-171 malR K Transcriptional regulator
EKDOCJBM_00451 2.8e-298 malQ 2.4.1.25 GH77 G 4-alpha-glucanotransferase
EKDOCJBM_00452 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
EKDOCJBM_00453 1.4e-39
EKDOCJBM_00454 6.1e-185 lplA 6.3.1.20 H Lipoate-protein ligase
EKDOCJBM_00455 6.6e-193 xerS D Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division
EKDOCJBM_00456 3.5e-169 pepN 3.4.11.2 E aminopeptidase
EKDOCJBM_00457 5.7e-135 glnQ 3.6.3.21 E abc transporter atp-binding protein
EKDOCJBM_00458 0.0 glnP P ABC-type amino acid transport signal transduction systems periplasmic component domain
EKDOCJBM_00459 3.4e-169 S CAAX amino terminal protease family protein
EKDOCJBM_00461 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
EKDOCJBM_00462 2.2e-84 mutT 3.6.1.55 F Nudix family
EKDOCJBM_00463 3.5e-138 ET ABC transporter
EKDOCJBM_00464 5.9e-138 ET Belongs to the bacterial solute-binding protein 3 family
EKDOCJBM_00465 2.8e-226 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
EKDOCJBM_00466 3.4e-14 rpmH J Ribosomal protein L34
EKDOCJBM_00467 1.5e-103 1.6.5.2 S NADPH-quinone reductase (modulator of drug activity B)
EKDOCJBM_00468 2e-106 K Transcriptional regulator
EKDOCJBM_00469 1.5e-181 jag S RNA-binding protein
EKDOCJBM_00470 8.2e-146 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
EKDOCJBM_00471 3.8e-54 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
EKDOCJBM_00472 9.2e-264 argH 4.3.2.1 E Argininosuccinate lyase
EKDOCJBM_00473 2e-230 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
EKDOCJBM_00474 1e-234 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
EKDOCJBM_00475 1.1e-86 ebsA S Family of unknown function (DUF5322)
EKDOCJBM_00476 2.4e-17 M LysM domain
EKDOCJBM_00477 1.6e-120 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
EKDOCJBM_00478 1e-85 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
EKDOCJBM_00479 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
EKDOCJBM_00480 1.5e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
EKDOCJBM_00481 1.1e-83 XK27_03610 K Gnat family
EKDOCJBM_00482 7.1e-92 yybC
EKDOCJBM_00483 4.9e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
EKDOCJBM_00484 7.2e-272 pepV 3.5.1.18 E Dipeptidase
EKDOCJBM_00485 9.1e-112 ung2 3.2.2.27 L Uracil-DNA glycosylase
EKDOCJBM_00486 6.4e-182 acoB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
EKDOCJBM_00487 7.8e-185 acoA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
EKDOCJBM_00488 6.1e-214 hpk9 2.7.13.3 T protein histidine kinase activity
EKDOCJBM_00489 2.2e-235 2.7.13.3 T protein histidine kinase activity
EKDOCJBM_00490 0.0 S the current gene model (or a revised gene model) may contain a frame shift
EKDOCJBM_00491 1.2e-233 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
EKDOCJBM_00492 3.8e-119 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
EKDOCJBM_00493 7.9e-235 3.5.1.28 M domain protein
EKDOCJBM_00494 1.4e-112 3.5.1.28 M domain protein
EKDOCJBM_00495 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
EKDOCJBM_00496 5.1e-119 K Helix-turn-helix domain, rpiR family
EKDOCJBM_00497 3.1e-105 vex2 V abc transporter atp-binding protein
EKDOCJBM_00498 6.6e-176 vex1 V Efflux ABC transporter, permease protein
EKDOCJBM_00499 1.5e-283 XK27_07020 S Belongs to the UPF0371 family
EKDOCJBM_00501 3.8e-196 gldA 1.1.1.6 C glycerol dehydrogenase
EKDOCJBM_00502 1e-176 XK27_10475 S oxidoreductase
EKDOCJBM_00503 3.1e-57 dhaM 2.7.1.121 S dihydroxyacetone kinase, phosphotransfer subunit
EKDOCJBM_00504 2e-95 dhaL 2.7.1.121 S Dihydroxyacetone kinase
EKDOCJBM_00505 2.8e-79 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dihydroxyacetone kinase
EKDOCJBM_00506 2.5e-215 ftsW D Belongs to the SEDS family
EKDOCJBM_00507 2.6e-68 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
EKDOCJBM_00508 7.9e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
EKDOCJBM_00509 4.8e-157 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
EKDOCJBM_00510 3.4e-280 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
EKDOCJBM_00511 4.6e-86 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
EKDOCJBM_00512 9.5e-78 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
EKDOCJBM_00513 2.8e-123 atpB C it plays a direct role in the translocation of protons across the membrane
EKDOCJBM_00514 5.4e-16 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
EKDOCJBM_00515 5.6e-132 K cell adhesion
EKDOCJBM_00516 6.6e-08
EKDOCJBM_00517 6.5e-21 WQ51_02665 S Protein of unknown function (DUF3042)
EKDOCJBM_00518 3.3e-161 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
EKDOCJBM_00519 1.5e-86 ytsP 1.8.4.14 T GAF domain-containing protein
EKDOCJBM_00520 2.6e-305 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
EKDOCJBM_00521 3.2e-175 birA 6.3.4.15 HK Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
EKDOCJBM_00522 9.2e-212 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
EKDOCJBM_00523 4.1e-130 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH component I
EKDOCJBM_00524 0.0 3.6.3.8 P cation transport ATPase
EKDOCJBM_00525 8.2e-243 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
EKDOCJBM_00526 2.2e-35 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
EKDOCJBM_00527 6.9e-234 dltB M Membrane protein involved in D-alanine export
EKDOCJBM_00528 4.9e-298 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
EKDOCJBM_00529 2.6e-161 yjlA EG membrane
EKDOCJBM_00530 1.6e-80 3.4.21.89 S RDD family
EKDOCJBM_00531 5e-141 K sequence-specific DNA binding
EKDOCJBM_00532 2.1e-146 V ABC transporter, ATP-binding protein
EKDOCJBM_00533 2.8e-94 S ABC-2 family transporter protein
EKDOCJBM_00534 4.2e-140 K sequence-specific DNA binding
EKDOCJBM_00535 4.6e-51 ywrO S general stress protein
EKDOCJBM_00536 4.5e-148 prtA 3.2.1.23 O Belongs to the peptidase S8 family
EKDOCJBM_00538 1.9e-07
EKDOCJBM_00543 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
EKDOCJBM_00544 4.3e-236 pepS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
EKDOCJBM_00545 5.5e-36 XK27_02060 S Transglycosylase associated protein
EKDOCJBM_00546 3.9e-72 badR K Transcriptional regulator, marr family
EKDOCJBM_00547 3.2e-95 S reductase
EKDOCJBM_00548 8.4e-23
EKDOCJBM_00549 7.1e-138 M LysM domain
EKDOCJBM_00550 5.4e-286 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
EKDOCJBM_00551 3.3e-15
EKDOCJBM_00552 8.7e-13
EKDOCJBM_00553 9.9e-231 mntH P H( )-stimulated, divalent metal cation uptake system
EKDOCJBM_00554 1.1e-33 XK27_12190 S protein conserved in bacteria
EKDOCJBM_00556 3.2e-87 bioY S biotin synthase
EKDOCJBM_00557 1.6e-12 S dextransucrase activity
EKDOCJBM_00558 0.0 S dextransucrase activity
EKDOCJBM_00559 0.0 S dextransucrase activity
EKDOCJBM_00560 2.3e-188
EKDOCJBM_00561 1.2e-277 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
EKDOCJBM_00562 1.4e-189 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
EKDOCJBM_00563 6.8e-101 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
EKDOCJBM_00564 2.5e-294 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
EKDOCJBM_00565 2.3e-300 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
EKDOCJBM_00566 1e-99 thiT S Thiamine transporter
EKDOCJBM_00567 3.3e-62 yjqA S Bacterial PH domain
EKDOCJBM_00568 3.7e-152 corA P CorA-like protein
EKDOCJBM_00569 6.4e-245 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
EKDOCJBM_00570 6.1e-64 K sequence-specific DNA binding
EKDOCJBM_00571 1.2e-09
EKDOCJBM_00573 0.0 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
EKDOCJBM_00574 2.2e-60 agrA KT response regulator
EKDOCJBM_00575 0.0 uup S abc transporter atp-binding protein
EKDOCJBM_00576 3.1e-113 udk 2.7.1.48 F Cytidine monophosphokinase
EKDOCJBM_00577 5.5e-179 yfmL 3.6.4.13 L DEAD DEAH box helicase
EKDOCJBM_00578 2.9e-226 XK27_05680 6.3.2.2, 6.3.2.4 M carbamoylphosphate synthase large subunit
EKDOCJBM_00579 2.7e-153 XK27_05675 S Esterase
EKDOCJBM_00580 1e-125 gntR1 K transcriptional
EKDOCJBM_00581 2e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
EKDOCJBM_00582 2.9e-274 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
EKDOCJBM_00583 5.9e-86
EKDOCJBM_00584 2.7e-91 niaR S small molecule binding protein (contains 3H domain)
EKDOCJBM_00585 6e-91 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
EKDOCJBM_00586 1.9e-197 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
EKDOCJBM_00587 2.9e-22 WQ51_00220 K Helix-turn-helix domain
EKDOCJBM_00588 3.7e-91 S Protein of unknown function (DUF3278)
EKDOCJBM_00589 7.3e-147 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
EKDOCJBM_00590 1.6e-241 XK27_04775 S hemerythrin HHE cation binding domain
EKDOCJBM_00591 6.1e-35 M1-755 P Hemerythrin HHE cation binding domain protein
EKDOCJBM_00592 4e-110 hsdS2 2.1.1.72 V Type I restriction modification DNA specificity domain
EKDOCJBM_00593 3.6e-85 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
EKDOCJBM_00594 7.3e-138 S haloacid dehalogenase-like hydrolase
EKDOCJBM_00595 1.6e-165 metF 1.5.1.20 E reductase
EKDOCJBM_00596 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
EKDOCJBM_00598 0.0 fruA 3.2.1.1, 3.2.1.26, 3.2.1.65, 3.2.1.80 GH13,GH32 G Belongs to the glycosyl hydrolase 32 family
EKDOCJBM_00599 1.2e-288 lpdA 1.8.1.4 C Dehydrogenase
EKDOCJBM_00600 1.5e-174 S hydrolase
EKDOCJBM_00601 4.3e-115 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase
EKDOCJBM_00602 1e-81 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
EKDOCJBM_00603 8.2e-144 XK27_00880 3.4.17.14, 3.5.1.28 M Glycosyl hydrolase, family 25
EKDOCJBM_00604 2e-26 P Hemerythrin HHE cation binding domain protein
EKDOCJBM_00605 1.3e-16 tcyB_2 P ABC transporter (permease)
EKDOCJBM_00606 3.2e-153 endA F DNA RNA non-specific endonuclease
EKDOCJBM_00607 7.2e-26 epuA S DNA-directed RNA polymerase subunit beta
EKDOCJBM_00608 2.2e-232 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
EKDOCJBM_00610 4.8e-165 G Belongs to the glycosyl hydrolase 8 (cellulase D) family
EKDOCJBM_00611 7.3e-150 sdaAA 4.3.1.17 E L-serine dehydratase
EKDOCJBM_00612 1.8e-119 sdaAB 4.3.1.17 E L-serine dehydratase
EKDOCJBM_00613 3.2e-86
EKDOCJBM_00615 2e-177 yegQ O Peptidase U32
EKDOCJBM_00616 7.5e-252 yegQ O Peptidase U32
EKDOCJBM_00617 4.2e-53
EKDOCJBM_00618 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
EKDOCJBM_00619 1.4e-161 XK27_05670 S Putative esterase
EKDOCJBM_00620 1.1e-264 gapN 1.2.1.9 C Belongs to the aldehyde dehydrogenase family
EKDOCJBM_00624 1.1e-135 blpT
EKDOCJBM_00625 5.4e-44 spiA K sequence-specific DNA binding
EKDOCJBM_00626 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
EKDOCJBM_00627 2e-163 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
EKDOCJBM_00628 4.5e-107 V CAAX protease self-immunity
EKDOCJBM_00629 3.2e-141 cppA E CppA N-terminal
EKDOCJBM_00630 1.6e-179 ampC V COG1680 Beta-lactamase class C and other penicillin binding proteins
EKDOCJBM_00632 2.8e-76 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
EKDOCJBM_00633 1.6e-148 cah 4.2.1.1 P carbonic anhydrase
EKDOCJBM_00634 0.0 lai 4.2.1.53 S Myosin-crossreactive antigen
EKDOCJBM_00636 0.0 pflB 2.3.1.54 C formate acetyltransferase'
EKDOCJBM_00637 6.2e-202 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
EKDOCJBM_00638 8e-35
EKDOCJBM_00639 3.7e-151 yxeM ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
EKDOCJBM_00640 5.2e-162 yxeN P ABC transporter (Permease
EKDOCJBM_00641 1.4e-130 tcyN 3.6.3.21 E abc transporter atp-binding protein
EKDOCJBM_00642 5e-10 S Protein of unknown function (DUF4059)
EKDOCJBM_00643 4.7e-171 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
EKDOCJBM_00644 2.9e-105 rsmD 2.1.1.171 L Methyltransferase
EKDOCJBM_00645 1e-87 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
EKDOCJBM_00646 4.2e-187 ylbL T Belongs to the peptidase S16 family
EKDOCJBM_00647 8.4e-184 yhcC S radical SAM protein
EKDOCJBM_00648 1e-96 ytqB 2.1.1.176 J (SAM)-dependent
EKDOCJBM_00650 0.0 yjcE P NhaP-type Na H and K H antiporters
EKDOCJBM_00651 4.1e-144 modF 3.6.3.21, 3.6.3.34 P abc transporter atp-binding protein
EKDOCJBM_00652 1.5e-239 hlyX S COG1253 Hemolysins and related proteins containing CBS domains
EKDOCJBM_00653 4.4e-07 MU outer membrane autotransporter barrel domain protein
EKDOCJBM_00654 3.9e-158 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
EKDOCJBM_00656 9e-75 XK27_03180 T universal stress protein
EKDOCJBM_00657 3.1e-239 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase
EKDOCJBM_00658 8.1e-140 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
EKDOCJBM_00659 6.8e-101 pncA Q isochorismatase
EKDOCJBM_00660 1e-294 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
EKDOCJBM_00661 7.6e-58 tagE 2.4.1.52 GT4 M transferase activity, transferring glycosyl groups
EKDOCJBM_00662 1.4e-47 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
EKDOCJBM_00663 2.2e-271 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
EKDOCJBM_00664 1e-273 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
EKDOCJBM_00665 1.6e-64
EKDOCJBM_00666 2.6e-153 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
EKDOCJBM_00667 1.4e-98 yqeG S hydrolase of the HAD superfamily
EKDOCJBM_00668 4.6e-213 yqeH S in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
EKDOCJBM_00669 7.7e-49 yhbY J RNA-binding protein
EKDOCJBM_00670 4.5e-117 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
EKDOCJBM_00671 4e-107 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
EKDOCJBM_00672 2e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
EKDOCJBM_00673 1.3e-139 yqeM Q Methyltransferase domain protein
EKDOCJBM_00674 2.2e-196 ylbM S Belongs to the UPF0348 family
EKDOCJBM_00675 7.6e-39 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
EKDOCJBM_00676 7.9e-44 yoeB S Addiction module toxin, Txe YoeB family
EKDOCJBM_00678 0.0 clpL O ATP-dependent Clp protease ATP-binding subunit
EKDOCJBM_00680 1.6e-103
EKDOCJBM_00683 1.1e-71 hit FG Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
EKDOCJBM_00684 1.6e-129 ecsA V abc transporter atp-binding protein
EKDOCJBM_00685 2.4e-176 ecsB U Bacterial ABC transporter protein EcsB
EKDOCJBM_00686 7.1e-152 ytmP 2.7.1.89 M Phosphotransferase
EKDOCJBM_00687 3.1e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
EKDOCJBM_00689 4.7e-224 ytfP S Flavoprotein
EKDOCJBM_00690 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
EKDOCJBM_00691 2.1e-63 XK27_02560 S cog cog2151
EKDOCJBM_00692 9.1e-42 WQ51_02910 S Protein of unknown function, DUF536
EKDOCJBM_00693 3.5e-103 dnaQ 2.7.7.7 L DNA polymerase III
EKDOCJBM_00694 7.8e-121 K transcriptional regulator, MerR family
EKDOCJBM_00695 0.0 V ABC transporter (Permease
EKDOCJBM_00696 1.5e-124 V abc transporter atp-binding protein
EKDOCJBM_00698 1.2e-43 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
EKDOCJBM_00699 1.1e-44
EKDOCJBM_00700 0.0 ctpE P E1-E2 ATPase
EKDOCJBM_00701 1.2e-59
EKDOCJBM_00702 2.1e-19 S Bacteriocin (Lactococcin_972)
EKDOCJBM_00703 0.0 S bacteriocin-associated integral membrane protein
EKDOCJBM_00704 3.5e-120 yujD V lipoprotein transporter activity
EKDOCJBM_00705 1.2e-40 pchB 2.5.1.19, 4.2.1.10, 4.2.99.21, 5.4.99.5 E Chorismate mutase type II
EKDOCJBM_00706 2.8e-257 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
EKDOCJBM_00707 4e-104 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH anthranilate
EKDOCJBM_00708 4.3e-178 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
EKDOCJBM_00709 7.2e-133 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
EKDOCJBM_00710 4.8e-97 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E belongs to the TrpF family
EKDOCJBM_00711 3.4e-230 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
EKDOCJBM_00712 2.3e-142 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
EKDOCJBM_00713 1.8e-175 EGP Major facilitator Superfamily
EKDOCJBM_00714 1.8e-72 copY K negative regulation of transcription, DNA-templated
EKDOCJBM_00715 0.0 copA 3.6.3.54 P P-type ATPase
EKDOCJBM_00716 2.7e-31 copZ 2.7.7.77 P Heavy metal-associated domain protein
EKDOCJBM_00719 5.1e-190 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
EKDOCJBM_00720 1.5e-113 papP P ABC transporter (Permease
EKDOCJBM_00721 4.6e-107 P ABC transporter (Permease
EKDOCJBM_00722 1.5e-135 glnQ 3.6.3.21 E abc transporter atp-binding protein
EKDOCJBM_00723 9.7e-155 cjaA ET ABC transporter substrate-binding protein
EKDOCJBM_00727 2.5e-253 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
EKDOCJBM_00728 4.8e-117 ywaF S Integral membrane protein (intg_mem_TP0381)
EKDOCJBM_00729 2.8e-134 fasA KT Response regulator of the LytR AlgR family
EKDOCJBM_00730 1.4e-237 fasC 2.7.13.3 T protein histidine kinase activity
EKDOCJBM_00731 4.3e-207 hpk9 2.7.13.3 T protein histidine kinase activity
EKDOCJBM_00732 1.2e-150 hpk9 2.7.13.3 T protein histidine kinase activity
EKDOCJBM_00733 3.1e-229 2.7.13.3 T signal transduction protein with a C-terminal ATPase domain
EKDOCJBM_00734 1.8e-273 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
EKDOCJBM_00735 0.0 amiA E ABC transporter, substrate-binding protein, family 5
EKDOCJBM_00736 1.4e-119 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
EKDOCJBM_00737 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
EKDOCJBM_00738 1.2e-50 S Protein of unknown function (DUF3397)
EKDOCJBM_00739 9.2e-89 cah 4.2.1.1 P Reversible hydration of carbon dioxide
EKDOCJBM_00740 7e-127 WQ51_05710 S Mitochondrial biogenesis AIM24
EKDOCJBM_00741 1.1e-226 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
EKDOCJBM_00742 6e-75 3.5.1.19 Q hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
EKDOCJBM_00743 2.7e-79 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
EKDOCJBM_00744 6.3e-108 XK27_09620 S FMN reductase (NADPH) activity
EKDOCJBM_00745 6e-230 XK27_09615 C reductase
EKDOCJBM_00746 2.1e-140 fnt P Formate nitrite transporter
EKDOCJBM_00747 1.6e-94 XK27_08585 S Psort location CytoplasmicMembrane, score
EKDOCJBM_00748 5.7e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
EKDOCJBM_00749 6.1e-171 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
EKDOCJBM_00750 1.5e-118 gluP 3.4.21.105 O membrane protein (homolog of Drosophila rhomboid)
EKDOCJBM_00751 2.8e-96 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
EKDOCJBM_00752 7.1e-222 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
EKDOCJBM_00753 5.3e-58 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
EKDOCJBM_00754 1.8e-141 S HAD hydrolase, family IA, variant
EKDOCJBM_00755 1.2e-160 rrmA 2.1.1.187 Q methyltransferase
EKDOCJBM_00759 1e-90 tadA 3.5.4.1, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
EKDOCJBM_00760 5.1e-66 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
EKDOCJBM_00761 4.7e-120 S CAAX protease self-immunity
EKDOCJBM_00762 5.1e-113 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
EKDOCJBM_00763 7.6e-09 S NTF2 fold immunity protein
EKDOCJBM_00764 9.4e-55 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
EKDOCJBM_00765 3.5e-08 XK27_10305 S Domain of unknown function (DUF4651)
EKDOCJBM_00766 1.3e-204 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
EKDOCJBM_00767 5.7e-130 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
EKDOCJBM_00768 1.8e-100 S CAAX amino terminal protease family protein
EKDOCJBM_00770 7.3e-110 V CAAX protease self-immunity
EKDOCJBM_00771 8.8e-27 lanR K sequence-specific DNA binding
EKDOCJBM_00772 4.1e-220 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
EKDOCJBM_00773 3.2e-175 ytxK 2.1.1.72 L DNA methylase
EKDOCJBM_00774 2e-12 comGF U Putative Competence protein ComGF
EKDOCJBM_00775 4.5e-71 comGF U Competence protein ComGF
EKDOCJBM_00776 3.1e-15 NU Type II secretory pathway pseudopilin
EKDOCJBM_00777 6.4e-70 cglD NU Competence protein
EKDOCJBM_00778 2.2e-43 comGC U Required for transformation and DNA binding
EKDOCJBM_00779 4.1e-142 cglB U protein transport across the cell outer membrane
EKDOCJBM_00780 1.1e-175 comGA NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
EKDOCJBM_00781 2.9e-68 S cog cog4699
EKDOCJBM_00782 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
EKDOCJBM_00783 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
EKDOCJBM_00784 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
EKDOCJBM_00785 6e-238 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
EKDOCJBM_00786 3e-195 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
EKDOCJBM_00787 2.2e-76 ilvN 2.2.1.6 E Acetolactate synthase
EKDOCJBM_00788 0.0 ilvB 2.2.1.6 EH Acetolactate synthase
EKDOCJBM_00789 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
EKDOCJBM_00790 6.4e-304 yloV S kinase related to dihydroxyacetone kinase
EKDOCJBM_00791 1.4e-57 asp S cog cog1302
EKDOCJBM_00792 7.1e-226 norN V Mate efflux family protein
EKDOCJBM_00793 1.3e-276 thrC 4.2.3.1 E Threonine synthase
EKDOCJBM_00796 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
EKDOCJBM_00797 0.0 pepO 3.4.24.71 O Peptidase family M13
EKDOCJBM_00798 0.0 treC 3.2.1.93 GH13 G COG0366 Glycosidases
EKDOCJBM_00799 0.0 treB 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
EKDOCJBM_00800 5.1e-125 treR K trehalose operon
EKDOCJBM_00801 6.3e-94 ywlG S Belongs to the UPF0340 family
EKDOCJBM_00804 8.2e-165 fba 4.1.2.13, 4.1.2.29 G aldolase
EKDOCJBM_00806 2.7e-241 6.3.2.2 H gamma-glutamylcysteine synthetase
EKDOCJBM_00807 4.4e-62 rplQ J ribosomal protein l17
EKDOCJBM_00808 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
EKDOCJBM_00809 1.9e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
EKDOCJBM_00810 4e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
EKDOCJBM_00811 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
EKDOCJBM_00812 2.7e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
EKDOCJBM_00813 7.3e-118 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
EKDOCJBM_00814 2.1e-230 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
EKDOCJBM_00815 1.7e-57 rplO J binds to the 23S rRNA
EKDOCJBM_00816 1.9e-23 rpmD J ribosomal protein l30
EKDOCJBM_00817 1.3e-79 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
EKDOCJBM_00818 1.9e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
EKDOCJBM_00819 6.6e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
EKDOCJBM_00820 1.2e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
EKDOCJBM_00821 1.5e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
EKDOCJBM_00822 1.6e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
EKDOCJBM_00823 1.4e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
EKDOCJBM_00824 3.9e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
EKDOCJBM_00825 6e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
EKDOCJBM_00826 3.5e-26 rpmC J Belongs to the universal ribosomal protein uL29 family
EKDOCJBM_00827 1.1e-71 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
EKDOCJBM_00828 1.6e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
EKDOCJBM_00829 7.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
EKDOCJBM_00830 8.3e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
EKDOCJBM_00831 6.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
EKDOCJBM_00832 2.4e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
EKDOCJBM_00833 5.7e-104 rplD J Forms part of the polypeptide exit tunnel
EKDOCJBM_00834 2.4e-110 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
EKDOCJBM_00835 2.9e-48 rpsJ J Involved in the binding of tRNA to the ribosomes
EKDOCJBM_00836 3e-187 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
EKDOCJBM_00837 5e-69 yhaI J Protein of unknown function (DUF805)
EKDOCJBM_00838 3.1e-63 yhaI S Protein of unknown function (DUF805)
EKDOCJBM_00839 4.2e-223 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
EKDOCJBM_00840 7.5e-141 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
EKDOCJBM_00841 9.3e-252 XK27_00765
EKDOCJBM_00842 6.8e-133 ecsA_2 V abc transporter atp-binding protein
EKDOCJBM_00843 1.4e-125 S Protein of unknown function (DUF554)
EKDOCJBM_00844 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
EKDOCJBM_00845 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
EKDOCJBM_00846 3e-246 2.7.13.3 T protein histidine kinase activity
EKDOCJBM_00847 3.8e-243 dcuS 2.7.13.3 T protein histidine kinase activity
EKDOCJBM_00848 8.9e-14
EKDOCJBM_00851 5.8e-146 V Psort location CytoplasmicMembrane, score
EKDOCJBM_00853 9.2e-300 O MreB/Mbl protein
EKDOCJBM_00854 6.3e-112 liaI S membrane
EKDOCJBM_00855 6.8e-75 XK27_02470 K LytTr DNA-binding domain protein
EKDOCJBM_00856 0.0 KT response to antibiotic
EKDOCJBM_00857 7.6e-129 yebC M Membrane
EKDOCJBM_00858 2.5e-261 XK27_03190 5.2.1.8 S hydrolases of the HAD superfamily
EKDOCJBM_00859 2e-180 ansA 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
EKDOCJBM_00861 2.9e-31 yozG K Transcriptional regulator
EKDOCJBM_00865 6.6e-123
EKDOCJBM_00866 1e-159 V ABC transporter
EKDOCJBM_00867 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
EKDOCJBM_00868 1.9e-182 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
EKDOCJBM_00869 3.4e-61 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
EKDOCJBM_00870 2.2e-204 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
EKDOCJBM_00871 1.1e-197 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
EKDOCJBM_00872 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
EKDOCJBM_00874 5.6e-188 manA 5.3.1.8 G mannose-6-phosphate isomerase
EKDOCJBM_00875 1.8e-172 scrK 2.7.1.2, 2.7.1.4 GK Fructokinase
EKDOCJBM_00876 0.0 scrA 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
EKDOCJBM_00877 1.3e-289 scrB 3.2.1.26, 3.2.1.80 GH32 G invertase
EKDOCJBM_00878 3.7e-179 scrR K Transcriptional regulator
EKDOCJBM_00879 8.1e-73 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
EKDOCJBM_00880 1.7e-61 yqhY S protein conserved in bacteria
EKDOCJBM_00881 1.2e-97 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
EKDOCJBM_00882 1.3e-84 comEB 3.5.4.12 F ComE operon protein 2
EKDOCJBM_00883 3.1e-187 pepP 3.4.11.9, 3.4.13.9 E Belongs to the peptidase M24B family
EKDOCJBM_00884 4.7e-32 blpT
EKDOCJBM_00887 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
EKDOCJBM_00888 8.4e-168 corA P COG0598 Mg2 and Co2 transporters
EKDOCJBM_00889 2.6e-123 XK27_01040 S Protein of unknown function (DUF1129)
EKDOCJBM_00891 1.7e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
EKDOCJBM_00892 4.3e-81 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
EKDOCJBM_00893 2.3e-47 rpsF J Binds together with S18 to 16S ribosomal RNA
EKDOCJBM_00894 1.5e-42 XK27_05745
EKDOCJBM_00895 6.1e-229 mutY L A G-specific adenine glycosylase
EKDOCJBM_00897 4.8e-07
EKDOCJBM_00898 1.3e-37
EKDOCJBM_00899 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
EKDOCJBM_00900 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
EKDOCJBM_00901 3.1e-90 cvpA S toxin biosynthetic process
EKDOCJBM_00902 9.3e-15 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
EKDOCJBM_00903 3.2e-153 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
EKDOCJBM_00904 6.1e-106 lepB 3.4.21.89 U Belongs to the peptidase S26 family
EKDOCJBM_00905 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
EKDOCJBM_00906 4.4e-47 azlD S branched-chain amino acid
EKDOCJBM_00907 3.3e-113 azlC E AzlC protein
EKDOCJBM_00908 3.3e-186 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
EKDOCJBM_00909 5.9e-71 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
EKDOCJBM_00910 3.5e-115 yeaZ 2.3.1.234 O COG1214, inactive homolog of metal-dependent proteases
EKDOCJBM_00911 1.5e-33 ykzG S Belongs to the UPF0356 family
EKDOCJBM_00912 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
EKDOCJBM_00913 6.6e-116 pscB M CHAP domain protein
EKDOCJBM_00914 5.2e-264 glnA 6.3.1.2 E glutamine synthetase
EKDOCJBM_00915 2.5e-62 glnR K Transcriptional regulator
EKDOCJBM_00916 1.5e-86 S Fusaric acid resistance protein-like
EKDOCJBM_00917 5.8e-222 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
EKDOCJBM_00918 2.5e-13
EKDOCJBM_00919 0.0 ptsG 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
EKDOCJBM_00920 1.7e-153 rgfB 3.1.3.90 L Endonuclease/Exonuclease/phosphatase family
EKDOCJBM_00921 4.2e-253 pgi 5.3.1.9 G Belongs to the GPI family
EKDOCJBM_00922 1.4e-142 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
EKDOCJBM_00923 0.0 srlM 2.7.1.202, 2.7.1.204 GKT Mga helix-turn-helix domain
EKDOCJBM_00924 6.8e-84 gutM K phosphoenolpyruvate-dependent sugar phosphotransferase system
EKDOCJBM_00925 1.1e-95 srlA G PTS system glucitol sorbitol-specific
EKDOCJBM_00926 3.8e-179 srlE 2.7.1.198 G PTS sorbitol transporter subunit IIB
EKDOCJBM_00927 4.2e-59 srlB 2.7.1.198 G sorbitol-specific, IIA component
EKDOCJBM_00928 9.2e-59 L MULE transposase domain
EKDOCJBM_00929 1.1e-108 L Transposase IS116 IS110 IS902
EKDOCJBM_00930 1.3e-305 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
EKDOCJBM_00931 2.2e-219 L the current gene model (or a revised gene model) may contain a frame shift
EKDOCJBM_00932 1.4e-153 Z012_04635 K sequence-specific DNA binding
EKDOCJBM_00933 1.3e-274 V ABC transporter
EKDOCJBM_00934 6.1e-126 yeeN K transcriptional regulatory protein
EKDOCJBM_00935 1.7e-46 yajC U protein transport
EKDOCJBM_00936 5.3e-141 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
EKDOCJBM_00937 2.1e-143 cdsA 2.7.7.41 S Belongs to the CDS family
EKDOCJBM_00938 7.2e-231 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
EKDOCJBM_00939 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
EKDOCJBM_00940 0.0 WQ51_06230 S ABC transporter
EKDOCJBM_00941 1.4e-142 cmpC S abc transporter atp-binding protein
EKDOCJBM_00942 2.7e-40 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
EKDOCJBM_00943 3.4e-286 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
EKDOCJBM_00945 1e-42
EKDOCJBM_00946 7.6e-55 S TM2 domain
EKDOCJBM_00947 1.8e-164 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
EKDOCJBM_00948 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
EKDOCJBM_00949 6.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
EKDOCJBM_00950 2.8e-24 secE U Belongs to the SecE SEC61-gamma family
EKDOCJBM_00951 8.4e-96 nusG K Participates in transcription elongation, termination and antitermination
EKDOCJBM_00952 2.4e-73 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I phosphatidate phosphatase activity
EKDOCJBM_00953 5.6e-144 cof S Sucrose-6F-phosphate phosphohydrolase
EKDOCJBM_00954 1.5e-135 glcR K transcriptional regulator (DeoR family)
EKDOCJBM_00955 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
EKDOCJBM_00956 2.9e-73 K transcriptional
EKDOCJBM_00957 6.8e-234 S COG1073 Hydrolases of the alpha beta superfamily
EKDOCJBM_00958 2.3e-151 cylA V abc transporter atp-binding protein
EKDOCJBM_00959 1.8e-129 cylB V ABC-2 type transporter
EKDOCJBM_00960 7.6e-74 K COG3279 Response regulator of the LytR AlgR family
EKDOCJBM_00961 1.8e-32 S Protein of unknown function (DUF3021)
EKDOCJBM_00962 1.4e-122 mta K Transcriptional
EKDOCJBM_00963 5.6e-121 yhcA V abc transporter atp-binding protein
EKDOCJBM_00964 6.3e-214 macB_2 V FtsX-like permease family
EKDOCJBM_00965 1.8e-265 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
EKDOCJBM_00966 3.8e-148 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
EKDOCJBM_00967 1.7e-73 yhaI S Protein of unknown function (DUF805)
EKDOCJBM_00968 2.6e-255 pepC 3.4.22.40 E aminopeptidase
EKDOCJBM_00969 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
EKDOCJBM_00970 9.6e-109 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
EKDOCJBM_00971 5.8e-94 ypsA S Belongs to the UPF0398 family
EKDOCJBM_00972 1.6e-49 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
EKDOCJBM_00973 9.6e-222 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
EKDOCJBM_00974 2.1e-269 mapZ D Early cell division protein that marks the future cell division site and supports proper FtsZ ring positioning
EKDOCJBM_00975 0.0 snf 2.7.11.1 L Superfamily II DNA RNA helicases, SNF2 family'
EKDOCJBM_00976 9.6e-23
EKDOCJBM_00977 4.7e-257 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
EKDOCJBM_00978 4.1e-89 XK27_09675 K histone acetyltransferase HPA2 and related acetyltransferases
EKDOCJBM_00979 1.7e-303 mltG ADL Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
EKDOCJBM_00980 1.2e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
EKDOCJBM_00981 7.7e-166 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
EKDOCJBM_00982 2e-45 acyP 3.6.1.7 C Belongs to the acylphosphatase family
EKDOCJBM_00983 4.6e-129 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
EKDOCJBM_00984 7.3e-94 XK27_09705 6.1.1.14 S HD superfamily hydrolase
EKDOCJBM_00985 6.9e-103 ybhL S Belongs to the BI1 family
EKDOCJBM_00986 2.4e-12 ycdA S Domain of unknown function (DUF4352)
EKDOCJBM_00987 2.1e-243 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
EKDOCJBM_00988 1.4e-90 K transcriptional regulator
EKDOCJBM_00989 1.6e-36 yneF S UPF0154 protein
EKDOCJBM_00990 3.4e-149 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
EKDOCJBM_00991 2.1e-185 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
EKDOCJBM_00992 8.7e-98 XK27_09740 S Phosphoesterase
EKDOCJBM_00993 8.3e-87 ykuL S CBS domain
EKDOCJBM_00994 1e-134 xerD L tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site
EKDOCJBM_00995 5.9e-121 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
EKDOCJBM_00996 1.9e-93 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
EKDOCJBM_00997 4.4e-132 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
EKDOCJBM_00998 1.4e-13 yidD M Could be involved in insertion of integral membrane proteins into the membrane
EKDOCJBM_00999 9.3e-259 trkH P Cation transport protein
EKDOCJBM_01000 1e-246 trkA P Potassium transporter peripheral membrane component
EKDOCJBM_01001 5.1e-95 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
EKDOCJBM_01002 7.1e-90 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
EKDOCJBM_01003 2.8e-106 bcrC 3.6.1.27 I Membrane-associated phospholipid phosphatase
EKDOCJBM_01004 1.5e-239 metY 2.5.1.49 E o-acetylhomoserine
EKDOCJBM_01005 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
EKDOCJBM_01006 4.3e-242 agcS E (Alanine) symporter
EKDOCJBM_01007 1.2e-244 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
EKDOCJBM_01008 1.1e-169 bglC K Transcriptional regulator
EKDOCJBM_01009 0.0 sasH 3.1.3.5, 3.6.1.45 F Belongs to the 5'-nucleotidase family
EKDOCJBM_01010 3.2e-81 yecS P ABC transporter (Permease
EKDOCJBM_01011 8.7e-148 yckB ET Belongs to the bacterial solute-binding protein 3 family
EKDOCJBM_01012 1.1e-240 nylA 3.5.1.4 J Belongs to the amidase family
EKDOCJBM_01013 4.4e-112 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
EKDOCJBM_01014 4.5e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
EKDOCJBM_01015 4.5e-177 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
EKDOCJBM_01016 3.8e-145 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
EKDOCJBM_01017 2.7e-94 thiJ 2.7.11.1, 3.5.1.124 S DJ-1 family
EKDOCJBM_01018 1e-142 S TraX protein
EKDOCJBM_01019 5.1e-309 FbpA K RNA-binding protein homologous to eukaryotic snRNP
EKDOCJBM_01020 3.3e-270 S Psort location CytoplasmicMembrane, score
EKDOCJBM_01021 8.5e-227 dinF V Mate efflux family protein
EKDOCJBM_01022 4.9e-179 yclQ P ABC-type enterochelin transport system, periplasmic component
EKDOCJBM_01023 6e-166 S von Willebrand factor (vWF) type A domain
EKDOCJBM_01024 8.3e-111 gph 3.1.3.18 S HAD hydrolase, family IA, variant 1
EKDOCJBM_01025 8.4e-134 2.4.2.3 F Phosphorylase superfamily
EKDOCJBM_01026 1.1e-92 K LysR substrate binding domain
EKDOCJBM_01027 7.5e-125 ltaE 4.1.2.48 E Beta-eliminating lyase
EKDOCJBM_01028 5.1e-105 K Bacterial regulatory proteins, tetR family
EKDOCJBM_01029 8.7e-177 ybhR V ABC-2 family transporter protein
EKDOCJBM_01030 5.5e-127 ybhF_2 V abc transporter atp-binding protein
EKDOCJBM_01031 7.5e-147 G protein with an alpha beta hydrolase fold
EKDOCJBM_01032 3.1e-181 S Hydrolases of the alpha beta superfamily
EKDOCJBM_01033 1.6e-157 K Transcriptional regulator
EKDOCJBM_01034 3.8e-111 adhB 1.1.1.1, 1.1.1.14 E Dehydrogenase
EKDOCJBM_01035 8.1e-32 adhB 1.1.1.1, 1.1.1.14 E Zinc-binding dehydrogenase
EKDOCJBM_01036 6.7e-201 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
EKDOCJBM_01037 3.3e-161 czcD P cation diffusion facilitator family transporter
EKDOCJBM_01038 1.7e-96 K Transcriptional regulator, TetR family
EKDOCJBM_01039 7.2e-67 S Protein of unknown function with HXXEE motif
EKDOCJBM_01040 3.7e-12
EKDOCJBM_01041 2.9e-33 pnuC H nicotinamide mononucleotide transporter
EKDOCJBM_01042 4.4e-112 tnp L DDE domain
EKDOCJBM_01043 1.8e-147 cbiO2 P ABC transporter, ATP-binding protein
EKDOCJBM_01044 4.5e-157 P ATPase activity
EKDOCJBM_01045 1.3e-132 cbiQ P Cobalt transport protein
EKDOCJBM_01046 2.2e-92 2.7.7.65 T Psort location CytoplasmicMembrane, score
EKDOCJBM_01047 4.4e-141 S Phenazine biosynthesis protein
EKDOCJBM_01048 6.5e-108 magIII L Base excision DNA repair protein, HhH-GPD family
EKDOCJBM_01049 2e-264 proWX P ABC transporter
EKDOCJBM_01050 4.6e-129 proV E abc transporter atp-binding protein
EKDOCJBM_01051 4.5e-169 C alcohol dehydrogenase
EKDOCJBM_01052 1.2e-133 1.6.5.2 GM NmrA-like family
EKDOCJBM_01053 2.1e-71 mgrA K Transcriptional regulator, MarR family
EKDOCJBM_01054 1.1e-31 ymdB S Macro domain protein
EKDOCJBM_01055 2.2e-85 K COG COG0846 NAD-dependent protein deacetylases, SIR2 family
EKDOCJBM_01056 2.8e-41 C Pyridoxamine 5'-phosphate oxidase
EKDOCJBM_01057 3.1e-130 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
EKDOCJBM_01058 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
EKDOCJBM_01061 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
EKDOCJBM_01063 1e-20 L the current gene model (or a revised gene model) may contain a frame shift
EKDOCJBM_01064 5.3e-130 deoD 2.4.2.1, 2.4.2.28 F purine nucleoside phosphorylase
EKDOCJBM_01065 5.8e-137 yfeJ 6.3.5.2 F glutamine amidotransferase
EKDOCJBM_01066 2.3e-181 clcA_2 P Chloride transporter, ClC family
EKDOCJBM_01067 7.5e-149 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
EKDOCJBM_01068 5.5e-95 S Protein of unknown function (DUF1697)
EKDOCJBM_01069 8e-232 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
EKDOCJBM_01070 1.5e-121 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
EKDOCJBM_01071 2.5e-253 V Glucan-binding protein C
EKDOCJBM_01072 4e-50 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
EKDOCJBM_01073 2.7e-224 XK27_05470 E Methionine synthase
EKDOCJBM_01074 1.1e-258 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
EKDOCJBM_01075 1.1e-235 T PhoQ Sensor
EKDOCJBM_01076 1.5e-118 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
EKDOCJBM_01077 2e-149 S TraX protein
EKDOCJBM_01079 1.3e-51 V ABC-2 family transporter protein
EKDOCJBM_01080 1.2e-83 mutF V AAA domain, putative AbiEii toxin, Type IV TA system
EKDOCJBM_01081 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
EKDOCJBM_01082 2.5e-155 dprA LU DNA protecting protein DprA
EKDOCJBM_01083 1.5e-247 merA 1.16.1.1 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
EKDOCJBM_01084 4.1e-139 E Alpha beta hydrolase
EKDOCJBM_01087 3.7e-199 ald 1.4.1.1 C Belongs to the AlaDH PNT family
EKDOCJBM_01089 2.1e-213 hipO 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
EKDOCJBM_01090 5.3e-136 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
EKDOCJBM_01091 3.9e-114 S VIT family
EKDOCJBM_01092 2.3e-131 deoD_1 2.4.2.3 F Phosphorylase superfamily
EKDOCJBM_01093 4.8e-21
EKDOCJBM_01094 1.6e-28 XK27_00085 K Transcriptional
EKDOCJBM_01095 1e-195 yceA S Belongs to the UPF0176 family
EKDOCJBM_01096 1e-122 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
EKDOCJBM_01097 3.3e-197 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
EKDOCJBM_01098 0.0 lmrA V abc transporter atp-binding protein
EKDOCJBM_01099 0.0 mdlB V abc transporter atp-binding protein
EKDOCJBM_01100 9.9e-16 xerS D Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division
EKDOCJBM_01101 9.8e-47 murE 6.3.2.13, 6.3.2.7 M to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
EKDOCJBM_01102 1.1e-109 fhuC 3.6.3.34 HP COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
EKDOCJBM_01103 1.2e-121 fhuD P ABC transporter, substratebinding protein
EKDOCJBM_01104 1.7e-134 fhuB P FecCD transport family
EKDOCJBM_01105 1e-110 fhuG P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
EKDOCJBM_01108 1.2e-114 K Psort location Cytoplasmic, score
EKDOCJBM_01109 4.6e-45 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
EKDOCJBM_01110 1.6e-77 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
EKDOCJBM_01111 4.2e-212 V permease protein
EKDOCJBM_01112 1.7e-120 macB V ABC transporter, ATP-binding protein
EKDOCJBM_01113 2.3e-181 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
EKDOCJBM_01114 4.4e-127 2.1.1.223 S Putative SAM-dependent methyltransferase
EKDOCJBM_01115 0.0 carB 6.3.5.5 F carbamoyl-phosphate synthetase ammonia chain
EKDOCJBM_01116 9.3e-211 carA 6.3.5.5 F carbamoyl-phosphate synthetase glutamine chain
EKDOCJBM_01117 1.3e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
EKDOCJBM_01118 3.6e-222 pyrP F uracil Permease
EKDOCJBM_01119 4.8e-88 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
EKDOCJBM_01120 1.1e-161 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
EKDOCJBM_01121 4.8e-76 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
EKDOCJBM_01122 4.7e-168 fhuR K transcriptional regulator (lysR family)
EKDOCJBM_01124 3.4e-69 K Helix-turn-helix
EKDOCJBM_01128 9.2e-141 ppiA 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
EKDOCJBM_01129 0.0 pts33BCA 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
EKDOCJBM_01130 2.3e-07 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
EKDOCJBM_01131 1.3e-254 cycA E permease
EKDOCJBM_01132 5e-38 ynzC S UPF0291 protein
EKDOCJBM_01133 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
EKDOCJBM_01134 3.7e-176 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
EKDOCJBM_01135 6.6e-221 S membrane
EKDOCJBM_01136 1.5e-219 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
EKDOCJBM_01137 3.5e-294 nptA P COG1283 Na phosphate symporter
EKDOCJBM_01138 1.2e-112 3.4.17.14, 3.5.1.28 NU amidase activity
EKDOCJBM_01139 6.9e-82 S Bacterial inner membrane protein
EKDOCJBM_01140 7.4e-144 XK27_04800 S Sucrose-6F-phosphate phosphohydrolase
EKDOCJBM_01141 1.6e-104 mur1 3.4.17.14, 3.5.1.28 NU amidase activity
EKDOCJBM_01142 1.9e-53 glnB K Belongs to the P(II) protein family
EKDOCJBM_01143 1.9e-228 amt P Ammonium Transporter
EKDOCJBM_01144 4e-156 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
EKDOCJBM_01145 1.2e-54 yabA L Involved in initiation control of chromosome replication
EKDOCJBM_01146 8.9e-134 yaaT S stage 0 sporulation protein
EKDOCJBM_01147 9.6e-158 holB 2.7.7.7 L dna polymerase iii
EKDOCJBM_01148 2.4e-110 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
EKDOCJBM_01150 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
EKDOCJBM_01151 2.6e-135 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
EKDOCJBM_01152 1.6e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
EKDOCJBM_01153 2.5e-153 K sequence-specific DNA binding
EKDOCJBM_01154 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
EKDOCJBM_01155 1.3e-54 yhaI L Membrane
EKDOCJBM_01156 1.2e-255 S Domain of unknown function (DUF4173)
EKDOCJBM_01157 6.8e-95 ureI S AmiS/UreI family transporter
EKDOCJBM_01158 7.6e-46 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
EKDOCJBM_01159 7.8e-54 ureB 3.5.1.5 E Belongs to the urease beta subunit family
EKDOCJBM_01160 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
EKDOCJBM_01161 6.6e-78 ureE O enzyme active site formation
EKDOCJBM_01162 5.3e-130 ureF O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
EKDOCJBM_01163 9.5e-112 ureG KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
EKDOCJBM_01164 3.1e-161 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
EKDOCJBM_01165 2.1e-177 cbiM P PDGLE domain
EKDOCJBM_01166 7.5e-138 P cobalt transport protein
EKDOCJBM_01167 6.3e-131 cbiO P ABC transporter
EKDOCJBM_01168 1.1e-137 ET ABC transporter substrate-binding protein
EKDOCJBM_01169 1.4e-164 metQ M Belongs to the NlpA lipoprotein family
EKDOCJBM_01170 5.9e-263 dapE 3.5.1.18 E COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases
EKDOCJBM_01171 7.5e-189 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
EKDOCJBM_01172 1.2e-99 metI P ABC transporter (Permease
EKDOCJBM_01173 1.8e-210 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
EKDOCJBM_01174 1.2e-120 ktrA P COG0569 K transport systems, NAD-binding component
EKDOCJBM_01175 2.9e-238 P COG0168 Trk-type K transport systems, membrane components
EKDOCJBM_01176 1.5e-129 rsmG 2.1.1.170 J Ribosomal RNA small subunit methyltransferase G
EKDOCJBM_01177 1.8e-90 yceD K metal-binding, possibly nucleic acid-binding protein
EKDOCJBM_01178 7.9e-123 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
EKDOCJBM_01179 6e-280 T PhoQ Sensor
EKDOCJBM_01180 1.4e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
EKDOCJBM_01181 1.6e-216 dnaB L Replication initiation and membrane attachment
EKDOCJBM_01182 1.5e-166 dnaI L Primosomal protein DnaI
EKDOCJBM_01183 2.6e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
EKDOCJBM_01184 3.2e-107
EKDOCJBM_01185 3.1e-229 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
EKDOCJBM_01186 2.5e-62 manO S protein conserved in bacteria
EKDOCJBM_01187 3.3e-169 manN G PTS system mannose fructose sorbose family IID component
EKDOCJBM_01188 2.6e-117 manM G pts system
EKDOCJBM_01189 4.9e-174 manL 2.7.1.191 G pts system
EKDOCJBM_01190 2e-67 manO S Protein conserved in bacteria
EKDOCJBM_01191 1.9e-164 manN G PTS system mannose fructose sorbose family IID component
EKDOCJBM_01192 4.7e-135 manY G pts system
EKDOCJBM_01193 1.6e-169 manL 2.7.1.191 G pts system
EKDOCJBM_01194 7.5e-140 XK27_00940 1.2.1.70, 3.5.1.9 S Metal-dependent hydrolase
EKDOCJBM_01195 3.5e-154 yitU 3.1.3.104 S hydrolases of the HAD superfamily
EKDOCJBM_01196 5.6e-248 pbuO S permease
EKDOCJBM_01197 2.5e-77 ydiB 2.7.1.221, 5.1.1.1 M ATPase or kinase
EKDOCJBM_01198 2.4e-92 XK27_05885 2.3.1.82 M phosphinothricin N-acetyltransferase activity
EKDOCJBM_01199 6.7e-213 brpA K Transcriptional
EKDOCJBM_01200 2.3e-81 rimP S Required for maturation of 30S ribosomal subunits
EKDOCJBM_01201 6.2e-200 nusA K Participates in both transcription termination and antitermination
EKDOCJBM_01202 2.7e-48 ylxR K Nucleic-acid-binding protein implicated in transcription termination
EKDOCJBM_01203 8e-42 ylxQ J ribosomal protein
EKDOCJBM_01204 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
EKDOCJBM_01205 8.6e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
EKDOCJBM_01206 1.4e-101 yvdD 3.2.2.10 S Belongs to the LOG family
EKDOCJBM_01207 6e-274 murE 6.3.2.13, 6.3.2.7 M to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
EKDOCJBM_01208 3.5e-283 ytgP S Membrane protein involved in the export of O-antigen and teichoic acid
EKDOCJBM_01209 0.0 pacL 3.6.3.8, 3.6.3.9 P cation transport ATPase
EKDOCJBM_01210 3.3e-200 metB 2.5.1.48, 4.4.1.8 E cystathionine
EKDOCJBM_01211 4.3e-222 malY 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
EKDOCJBM_01212 2e-132 4.1.1.37 H Uroporphyrinogen decarboxylase (URO-D)
EKDOCJBM_01213 4e-164 ET ABC transporter substrate-binding protein
EKDOCJBM_01214 9.1e-111 ytmL P ABC transporter (Permease
EKDOCJBM_01215 6e-115 yxeN P ABC transporter, permease protein
EKDOCJBM_01216 1.3e-137 tcyC2 3.6.3.21 E abc transporter atp-binding protein
EKDOCJBM_01218 4e-60 M Putative cell wall binding repeat
EKDOCJBM_01219 0.0 S dextransucrase activity
EKDOCJBM_01220 1.2e-215 yfnA E amino acid
EKDOCJBM_01221 2e-50 XK27_01300 P Protein conserved in bacteria
EKDOCJBM_01222 7.9e-115 S Carbohydrate-binding domain-containing protein Cthe_2159
EKDOCJBM_01223 2.3e-19 csbD K CsbD-like
EKDOCJBM_01224 9.5e-107 S Protein of unknown function (DUF421)
EKDOCJBM_01225 8.1e-60 S Protein of unknown function (DUF3290)
EKDOCJBM_01226 3.9e-181 manA 5.3.1.8 G mannose-6-phosphate isomerase
EKDOCJBM_01227 8.9e-232 brnQ E Component of the transport system for branched-chain amino acids
EKDOCJBM_01228 2e-180 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
EKDOCJBM_01230 3e-243 norM V Multidrug efflux pump
EKDOCJBM_01231 7.5e-60 pdxH S pyridoxamine 5'-phosphate oxidase
EKDOCJBM_01232 1.5e-223 pbuX F xanthine permease
EKDOCJBM_01233 4.3e-98 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
EKDOCJBM_01234 5.4e-124 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
EKDOCJBM_01235 2.2e-150 T Histidine kinase
EKDOCJBM_01236 6e-132 macB2 V ABC transporter, ATP-binding protein
EKDOCJBM_01237 0.0 V ABC transporter (permease)
EKDOCJBM_01238 6.1e-93 XK27_05000 S metal cluster binding
EKDOCJBM_01239 2.2e-29 liaI KT membrane
EKDOCJBM_01240 1.3e-16 liaI KT membrane
EKDOCJBM_01241 4.1e-156 XK27_09825 V abc transporter atp-binding protein
EKDOCJBM_01242 1.2e-116 yvfS V Transporter
EKDOCJBM_01243 1e-83 cdd 2.4.2.4, 3.5.4.5 F cytidine deaminase activity
EKDOCJBM_01244 1.5e-164 yocS S Transporter
EKDOCJBM_01247 3.9e-159 XK27_09825 V 'abc transporter, ATP-binding protein
EKDOCJBM_01248 1.7e-131 yvfS V ABC-2 type transporter
EKDOCJBM_01249 3.1e-190 desK 2.7.13.3 T Histidine kinase
EKDOCJBM_01250 2.6e-101 desR K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
EKDOCJBM_01251 3.2e-209 S Protein of unknown function DUF262
EKDOCJBM_01252 6.1e-126 S Protein of unknown function DUF262
EKDOCJBM_01253 4.3e-85 yfjR K regulation of single-species biofilm formation
EKDOCJBM_01256 6.1e-185 S abc transporter atp-binding protein
EKDOCJBM_01257 3.2e-139 S ABC transporter (permease)
EKDOCJBM_01258 1.6e-140 S ABC-2 family transporter protein
EKDOCJBM_01259 2e-77 K Acetyltransferase (GNAT) domain
EKDOCJBM_01260 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
EKDOCJBM_01261 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
EKDOCJBM_01262 3.6e-180 XK27_08075 M glycosyl transferase family 2
EKDOCJBM_01263 1.4e-96 S Carbohydrate-binding domain-containing protein Cthe_2159
EKDOCJBM_01264 6.3e-145 P molecular chaperone
EKDOCJBM_01265 7.6e-94 XK27_05505 S Psort location CytoplasmicMembrane, score
EKDOCJBM_01267 4.1e-50 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
EKDOCJBM_01268 3.6e-60 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
EKDOCJBM_01269 3.6e-137 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
EKDOCJBM_01270 2.4e-130 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
EKDOCJBM_01271 4.7e-111 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
EKDOCJBM_01272 2e-106 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
EKDOCJBM_01273 2.3e-232 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
EKDOCJBM_01274 3e-116 hisG 2.4.2.17 E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
EKDOCJBM_01275 1.8e-181 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
EKDOCJBM_01276 5.9e-194 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
EKDOCJBM_01277 1.8e-60 XK27_08085
EKDOCJBM_01278 8e-147 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
EKDOCJBM_01279 2.7e-137 hisK 3.1.3.15 E Histidinol phosphatase and related hydrolases of the PHP family
EKDOCJBM_01280 2.5e-115 ylfI S tigr01906
EKDOCJBM_01281 1.8e-139 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
EKDOCJBM_01282 2.6e-140 fat 3.1.2.21 I Acyl-ACP thioesterase
EKDOCJBM_01283 2.9e-215 hemN H Involved in the biosynthesis of porphyrin-containing compound
EKDOCJBM_01284 2.9e-30 KT response to antibiotic
EKDOCJBM_01286 1.3e-204 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
EKDOCJBM_01287 2.7e-111 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
EKDOCJBM_01288 2.4e-161 rfbA 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
EKDOCJBM_01289 4.3e-258 S phospholipase Carboxylesterase
EKDOCJBM_01290 2.2e-196 yurR 1.4.5.1 E oxidoreductase
EKDOCJBM_01291 1.7e-143 zupT P Mediates zinc uptake. May also transport other divalent cations
EKDOCJBM_01292 2.2e-145 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
EKDOCJBM_01293 7.6e-118 trmK 2.1.1.217 S SAM-dependent methyltransferase
EKDOCJBM_01294 1.3e-64 gtrA S GtrA-like protein
EKDOCJBM_01295 5.7e-250 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
EKDOCJBM_01296 6e-169 ybbR S Protein conserved in bacteria
EKDOCJBM_01297 1.5e-147 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
EKDOCJBM_01298 1.2e-255 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain protein
EKDOCJBM_01299 2.3e-150 cobQ S glutamine amidotransferase
EKDOCJBM_01300 0.0 mprF 2.3.2.3 J Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
EKDOCJBM_01301 2e-132 pip 1.11.1.10 S Alpha beta hydrolase
EKDOCJBM_01302 1.6e-39 MA20_06245 S yiaA/B two helix domain
EKDOCJBM_01303 6e-42 yazA L endonuclease containing a URI domain
EKDOCJBM_01304 1.6e-140 yabB 2.1.1.223 L Methyltransferase
EKDOCJBM_01305 2.2e-144 nodB3 G Polysaccharide deacetylase
EKDOCJBM_01306 2.2e-142 plsC 2.3.1.51 I Acyltransferase
EKDOCJBM_01307 3.4e-97 comEA L COG1555 DNA uptake protein and related DNA-binding proteins
EKDOCJBM_01308 0.0 comEC S Competence protein ComEC
EKDOCJBM_01309 2.6e-233 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
EKDOCJBM_01310 2.8e-99 XK27_07830 2.3.1.128 J Acetyltransferase GNAT Family
EKDOCJBM_01311 3e-232 ytoI K transcriptional regulator containing CBS domains
EKDOCJBM_01312 4.2e-166 map 3.4.11.18 E Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed
EKDOCJBM_01313 3.7e-163 rbn E Belongs to the UPF0761 family
EKDOCJBM_01314 1.7e-85 ccl S cog cog4708
EKDOCJBM_01315 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
EKDOCJBM_01316 2.8e-185 yegS 2.7.1.107 I Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
EKDOCJBM_01317 4.1e-173 yfjR K regulation of single-species biofilm formation
EKDOCJBM_01319 1.3e-71 S QueT transporter
EKDOCJBM_01320 1.4e-158 xth 3.1.11.2 L exodeoxyribonuclease III
EKDOCJBM_01322 1.3e-198 XK27_00915 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
EKDOCJBM_01323 2.2e-17 yjdB S Domain of unknown function (DUF4767)
EKDOCJBM_01324 3.9e-167 tehB 2.1.1.265 PQ tellurite resistance protein tehb
EKDOCJBM_01325 1.5e-188 O protein import
EKDOCJBM_01326 2.7e-129 agrA KT phosphorelay signal transduction system
EKDOCJBM_01327 7.8e-198 2.7.13.3 T GHKL domain
EKDOCJBM_01329 2.4e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
EKDOCJBM_01330 2.4e-37 ylqC L Belongs to the UPF0109 family
EKDOCJBM_01331 1.6e-238 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
EKDOCJBM_01332 0.0 ydaO E amino acid
EKDOCJBM_01333 7.7e-100 folE 3.5.4.16 F gtp cyclohydrolase
EKDOCJBM_01334 1.7e-145 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
EKDOCJBM_01335 6.4e-292 amy 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
EKDOCJBM_01336 4.1e-62 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
EKDOCJBM_01337 1.7e-82 folK 2.7.6.3, 4.1.2.25 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
EKDOCJBM_01338 7.3e-169 murB 1.3.1.98 M cell wall formation
EKDOCJBM_01339 5.2e-212 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
EKDOCJBM_01340 4.1e-139 potB P ABC-type spermidine putrescine transport system, permease component I
EKDOCJBM_01341 4.7e-132 potC P ABC-type spermidine putrescine transport system, permease component II
EKDOCJBM_01342 2.6e-205 potD P spermidine putrescine ABC transporter
EKDOCJBM_01343 1.9e-145 XK27_08050 O HflC and HflK could regulate a protease
EKDOCJBM_01344 1.8e-71 gloA 4.4.1.5 E Lactoylglutathione lyase
EKDOCJBM_01345 8.3e-157 GK ROK family
EKDOCJBM_01346 3e-209 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
EKDOCJBM_01347 5.1e-104 wecD M Acetyltransferase (GNAT) domain
EKDOCJBM_01348 7.4e-222 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
EKDOCJBM_01349 5.4e-73 ogt 2.1.1.63, 3.2.2.20 L methylated-DNA-[protein]-cysteine S-methyltransferase activity
EKDOCJBM_01350 4.9e-60 arsC 1.20.4.1 P Belongs to the ArsC family
EKDOCJBM_01352 1.6e-187 femA 2.3.2.10, 2.3.2.16 V FemAB family
EKDOCJBM_01353 7.4e-81 U protein secretion
EKDOCJBM_01354 2.6e-191 dgs 2.4.1.208 GT4 M Glycosyltransferase, group 1 family protein
EKDOCJBM_01355 2.6e-247 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
EKDOCJBM_01356 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
EKDOCJBM_01357 1.2e-158 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
EKDOCJBM_01358 1.1e-200 S Protein of unknown function (DUF3114)
EKDOCJBM_01359 4.1e-29 pspC KT PspC domain protein
EKDOCJBM_01360 5.2e-119 yqfA K protein, Hemolysin III
EKDOCJBM_01361 3e-78 K hmm pf08876
EKDOCJBM_01362 4.7e-230 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
EKDOCJBM_01363 7.9e-216 mvaS 2.3.3.10 I synthase
EKDOCJBM_01364 5.9e-168 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
EKDOCJBM_01365 9.6e-94 folA 1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
EKDOCJBM_01366 9.7e-22
EKDOCJBM_01367 2.6e-225 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
EKDOCJBM_01368 3.9e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
EKDOCJBM_01369 1.2e-250 mmuP E amino acid
EKDOCJBM_01370 1.7e-171 mmuM 1.5.1.20, 2.1.1.10 H Homocysteine
EKDOCJBM_01371 2.2e-30 S Domain of unknown function (DUF1912)
EKDOCJBM_01372 4.8e-13 L Helix-hairpin-helix DNA-binding motif class 1
EKDOCJBM_01373 2.3e-108 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
EKDOCJBM_01374 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
EKDOCJBM_01376 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
EKDOCJBM_01377 2.4e-200 ilvE 2.6.1.42 E Aminotransferase
EKDOCJBM_01378 4.8e-16 S Protein of unknown function (DUF2969)
EKDOCJBM_01381 2.5e-204 rpsA 1.17.7.4 J ribosomal protein S1
EKDOCJBM_01384 4.2e-107 S Domain of Unknown Function with PDB structure (DUF3862)
EKDOCJBM_01385 3.8e-117 M Pfam SNARE associated Golgi protein
EKDOCJBM_01386 2.8e-187 murN 2.3.2.16 V FemAB family
EKDOCJBM_01387 1.8e-173 S oxidoreductase
EKDOCJBM_01388 6.2e-48 XK27_09445 S Domain of unknown function (DUF1827)
EKDOCJBM_01389 2.8e-84 mutT 3.5.4.33, 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
EKDOCJBM_01390 0.0 clpE O Belongs to the ClpA ClpB family
EKDOCJBM_01391 6.9e-181 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
EKDOCJBM_01392 1e-34 ykuJ S protein conserved in bacteria
EKDOCJBM_01393 5.8e-118 WQ51_01820 P Binding-protein-dependent transport system inner membrane component
EKDOCJBM_01394 6.4e-131 glnQ 3.6.3.21 E abc transporter atp-binding protein
EKDOCJBM_01395 7e-78 feoA P FeoA domain protein
EKDOCJBM_01396 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
EKDOCJBM_01397 6.6e-08
EKDOCJBM_01398 1.3e-150 I Alpha/beta hydrolase family
EKDOCJBM_01399 4.5e-152 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
EKDOCJBM_01400 1.7e-148 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
EKDOCJBM_01401 0.0 pbp2b 3.4.16.4 M penicillin-binding protein
EKDOCJBM_01402 1.3e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
EKDOCJBM_01403 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
EKDOCJBM_01404 4.6e-188 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
EKDOCJBM_01405 5.5e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
EKDOCJBM_01406 7.6e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
EKDOCJBM_01409 1.4e-113 vraR K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
EKDOCJBM_01410 3.3e-170 vraS 2.7.13.3 T Histidine kinase
EKDOCJBM_01411 3.3e-116 yvqF S Membrane
EKDOCJBM_01412 9e-104 kcsA P Ion transport protein
EKDOCJBM_01413 1.4e-302 prkC 2.7.11.1 KLT serine threonine protein kinase
EKDOCJBM_01414 4.8e-137 stp 3.1.3.16 T phosphatase
EKDOCJBM_01415 3.2e-245 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
EKDOCJBM_01416 1.2e-171 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
EKDOCJBM_01417 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
EKDOCJBM_01418 7.9e-46 rpoZ 2.7.7.6 K DNA-directed 5'-3' RNA polymerase activity
EKDOCJBM_01419 8.8e-113 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
EKDOCJBM_01420 3.8e-193 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
EKDOCJBM_01421 1.2e-146 XK27_02985 S overlaps another CDS with the same product name
EKDOCJBM_01422 3.1e-147 supH S overlaps another CDS with the same product name
EKDOCJBM_01423 6.1e-61 yvoA_1 K Transcriptional
EKDOCJBM_01424 4e-122 skfE V abc transporter atp-binding protein
EKDOCJBM_01425 1.3e-126 V Psort location CytoplasmicMembrane, score
EKDOCJBM_01426 1e-170 oppF P Belongs to the ABC transporter superfamily
EKDOCJBM_01427 2.3e-201 oppD P Belongs to the ABC transporter superfamily
EKDOCJBM_01428 1.4e-167 amiD P ABC transporter (Permease
EKDOCJBM_01429 3.5e-277 amiC P ABC transporter (Permease
EKDOCJBM_01430 7.3e-307 amiA E ABC transporter, substrate-binding protein, family 5
EKDOCJBM_01431 0.0 amiA E ABC transporter, substrate-binding protein, family 5
EKDOCJBM_01432 2.4e-173 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
EKDOCJBM_01433 4.5e-171 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
EKDOCJBM_01434 7.5e-152 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
EKDOCJBM_01435 6.7e-119 yjbM 2.7.6.5 S Gtp pyrophosphokinase
EKDOCJBM_01436 7.1e-101 yjbK S Adenylate cyclase
EKDOCJBM_01437 1.5e-175 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
EKDOCJBM_01438 6.9e-201 iscS 2.8.1.7 E Cysteine desulfurase
EKDOCJBM_01439 4.1e-59 XK27_04120 S Putative amino acid metabolism
EKDOCJBM_01440 6.2e-117 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
EKDOCJBM_01441 1.8e-127 puuD T peptidase C26
EKDOCJBM_01442 1.8e-114 radC E Belongs to the UPF0758 family
EKDOCJBM_01443 1.5e-305 rgpF M Rhamnan synthesis protein F
EKDOCJBM_01444 3.3e-225 rgpD 3.6.3.38 P Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
EKDOCJBM_01445 6.8e-142 rgpC GM Transport permease protein
EKDOCJBM_01446 1.2e-174 rgpB GT2 M Glycosyltransferase, group 2 family protein
EKDOCJBM_01447 5.4e-225 rgpA GT4 M Domain of unknown function (DUF1972)
EKDOCJBM_01448 2e-45 S Glucosyl transferase GtrII
EKDOCJBM_01449 3.7e-103 S Glucosyl transferase GtrII
EKDOCJBM_01450 1.7e-17 XK27_00735
EKDOCJBM_01451 1.5e-247 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
EKDOCJBM_01453 3.7e-131 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
EKDOCJBM_01454 5.7e-10 O ADP-ribosylglycohydrolase
EKDOCJBM_01455 4.3e-62 paaI Q protein possibly involved in aromatic compounds catabolism
EKDOCJBM_01456 2.7e-61 ycaO O OsmC-like protein
EKDOCJBM_01458 1.8e-151 EG Permeases of the drug metabolite transporter (DMT) superfamily
EKDOCJBM_01459 2.5e-07 N PFAM Uncharacterised protein family UPF0150
EKDOCJBM_01460 3.5e-112 serB 3.1.3.3 E phosphoserine phosphatase
EKDOCJBM_01461 6e-305 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
EKDOCJBM_01462 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
EKDOCJBM_01463 5.5e-98 3.1.3.18 S IA, variant 1
EKDOCJBM_01464 3.2e-116 lrgB M Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgA, with the holin-like proteins CidA and or CidB. The LrgAB and CidAB proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses
EKDOCJBM_01465 3.5e-56 lrgA S Effector of murein hydrolase LrgA
EKDOCJBM_01466 2.7e-296
EKDOCJBM_01467 3.4e-217 dcm 2.1.1.37 H cytosine-specific methyltransferase
EKDOCJBM_01468 1.6e-52 E amidohydrolase
EKDOCJBM_01469 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
EKDOCJBM_01470 5.7e-172 S Helix-hairpin-helix DNA-binding motif class 1
EKDOCJBM_01471 5e-107 rimL 2.3.1.128, 5.2.1.8 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
EKDOCJBM_01472 1.3e-107 S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
EKDOCJBM_01473 3e-14 coiA 3.6.4.12 S Competence protein
EKDOCJBM_01474 7.5e-16 T peptidase
EKDOCJBM_01475 2e-147 rarD S Transporter
EKDOCJBM_01476 4.8e-154 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
EKDOCJBM_01477 6.8e-237 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
EKDOCJBM_01478 6.7e-135 yxkH G deacetylase
EKDOCJBM_01479 1.2e-205 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
EKDOCJBM_01480 5.6e-127 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
EKDOCJBM_01481 5.6e-217 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
EKDOCJBM_01482 1.1e-186 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
EKDOCJBM_01483 2.4e-228 mtnE 2.6.1.83 E mutations do not affect methionine salvage in vivo however
EKDOCJBM_01484 1.3e-142 cnhA 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
EKDOCJBM_01485 0.0 vanY 3.4.17.14, 3.5.1.28 M D-alanyl-D-alanine carboxypeptidase
EKDOCJBM_01487 1.3e-230 2.7.13.3 T GHKL domain
EKDOCJBM_01488 5.6e-135 agrA KT response regulator
EKDOCJBM_01489 3.1e-07
EKDOCJBM_01490 8.3e-128 5.2.1.8 G hydrolase
EKDOCJBM_01491 1.8e-113 1.14.14.5 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
EKDOCJBM_01492 7.7e-211 MA20_36090 S Protein of unknown function (DUF2974)
EKDOCJBM_01493 2.7e-132 sdh 1.1.1.276, 1.1.1.313, 1.1.1.381 S Belongs to the short-chain dehydrogenases reductases (SDR) family
EKDOCJBM_01494 4.4e-45 S Phage derived protein Gp49-like (DUF891)
EKDOCJBM_01495 6.5e-45 K Helix-turn-helix domain
EKDOCJBM_01496 0.0 hsdR 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
EKDOCJBM_01497 1.6e-17
EKDOCJBM_01498 8.4e-132 S Domain of unknown function DUF87
EKDOCJBM_01499 6.2e-88
EKDOCJBM_01500 3.1e-106 hsdS 3.1.21.3 V type I restriction modification DNA specificity domain protein
EKDOCJBM_01501 1.5e-181 S KAP family P-loop domain
EKDOCJBM_01502 8.1e-83 S Protein conserved in bacteria
EKDOCJBM_01503 6.2e-304 hsdM 2.1.1.72 V type I restriction-modification system
EKDOCJBM_01504 1.9e-135 S double-stranded DNA endodeoxyribonuclease activity
EKDOCJBM_01506 0.0 2.4.1.21 GT5 M Right handed beta helix region
EKDOCJBM_01507 4.2e-173 spd F DNA RNA non-specific endonuclease
EKDOCJBM_01508 1e-91 lemA S LemA family
EKDOCJBM_01509 1.3e-133 htpX O Belongs to the peptidase M48B family
EKDOCJBM_01510 3.8e-119 sirR K iron dependent repressor
EKDOCJBM_01511 4.2e-167 sitA P Belongs to the bacterial solute-binding protein 9 family
EKDOCJBM_01512 2.1e-133 mtsC P ABC-type Mn2 Zn2 transport systems, permease components
EKDOCJBM_01513 6e-129 sitB 3.6.3.35 P ABC transporter, ATP-binding protein
EKDOCJBM_01514 6.7e-73 S Psort location CytoplasmicMembrane, score
EKDOCJBM_01515 4.8e-64 S Domain of unknown function (DUF4430)
EKDOCJBM_01516 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
EKDOCJBM_01517 1.4e-184 holA 2.7.7.7 L DNA polymerase III delta subunit
EKDOCJBM_01518 9.4e-112 sodA 1.15.1.1 C radicals which are normally produced within the cells and which are toxic to biological systems
EKDOCJBM_01519 3.6e-172 3.5.2.6 V D-alanyl-D-alanine carboxypeptidase
EKDOCJBM_01520 7.5e-115 pilD 3.4.23.43 NOU Type II secretory pathway prepilin signal peptidase PulO and related peptidases
EKDOCJBM_01521 9.3e-92 dps P Belongs to the Dps family
EKDOCJBM_01522 2e-82 perR P Belongs to the Fur family
EKDOCJBM_01523 2.4e-27 yqgQ S protein conserved in bacteria
EKDOCJBM_01524 3.5e-177 glk 2.7.1.2 G Glucokinase
EKDOCJBM_01526 0.0 glgE 2.3.1.12, 2.4.99.16, 3.2.1.1, 3.2.1.14 GH13,GH18 M Pilin isopeptide linkage domain protein
EKDOCJBM_01527 2.2e-194 XK27_10075 S abc transporter atp-binding protein
EKDOCJBM_01528 0.0 V abc transporter atp-binding protein
EKDOCJBM_01529 8.8e-296 V abc transporter atp-binding protein
EKDOCJBM_01530 0.0 gshF 6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
EKDOCJBM_01532 5.9e-288 S Protein of unknown function (DUF3114)
EKDOCJBM_01533 2.9e-99 2.3.1.128 K Acetyltransferase GNAT Family
EKDOCJBM_01534 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
EKDOCJBM_01535 3.1e-283 glgA 2.4.1.21 GT5 G Synthesizes alpha-1,4-glucan chains using ADP-glucose
EKDOCJBM_01536 2.8e-181 glgD 2.4.1.21, 2.7.7.27 GT5 G glucose-1-phosphate adenylyltransferase
EKDOCJBM_01537 3.1e-188 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
EKDOCJBM_01538 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
EKDOCJBM_01539 0.0 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
EKDOCJBM_01540 7e-12 S Accessory secretory protein Sec, Asp5
EKDOCJBM_01541 3.9e-13 S Accessory secretory protein Sec Asp4
EKDOCJBM_01542 0.0 secA2 U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
EKDOCJBM_01543 1.6e-68 asp3 S Accessory Sec system protein Asp3
EKDOCJBM_01544 9.4e-302 asp2 3.4.11.5 S Accessory Sec system protein Asp2
EKDOCJBM_01545 9.5e-310 asp1 S Accessory Sec system protein Asp1
EKDOCJBM_01546 1.2e-163 secY2 U Part of the accessory SecA2 SecY2 system specifically required for export of
EKDOCJBM_01547 3.1e-242 M family 8
EKDOCJBM_01548 0.0 M cog cog1442
EKDOCJBM_01549 5.1e-167 cpsJ M Glycosyltransferase group 2 family protein
EKDOCJBM_01550 6.2e-232 M Glycosyltransferase, family 8
EKDOCJBM_01551 9.6e-186 nss M transferase activity, transferring glycosyl groups
EKDOCJBM_01552 1.4e-194 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
EKDOCJBM_01553 5.5e-286 tagE 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
EKDOCJBM_01554 9.9e-238 M Glycosyltransferase, family 8
EKDOCJBM_01555 1e-146 epsH S acetyltransferase'
EKDOCJBM_01556 0.0 M family 8
EKDOCJBM_01557 3.4e-155 cat 2.3.1.28 S acetyltransferase'
EKDOCJBM_01558 0.0 sbcC L ATPase involved in DNA repair
EKDOCJBM_01559 9e-223 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
EKDOCJBM_01560 0.0 GM domain, Protein
EKDOCJBM_01561 0.0 zmpB M signal peptide protein, YSIRK family
EKDOCJBM_01562 1.8e-225 M Pilin isopeptide linkage domain protein
EKDOCJBM_01563 5e-287 ahpF O alkyl hydroperoxide reductase
EKDOCJBM_01564 7.1e-106 ahpC 1.11.1.15 O alkyl hydroperoxide reductase
EKDOCJBM_01565 7.4e-138 rpsB J Belongs to the universal ribosomal protein uS2 family
EKDOCJBM_01566 1e-182 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
EKDOCJBM_01567 1.6e-82 S Putative small multi-drug export protein
EKDOCJBM_01568 1.8e-75 ctsR K Belongs to the CtsR family
EKDOCJBM_01569 0.0 clpC O Belongs to the ClpA ClpB family
EKDOCJBM_01570 2e-233 dacA 3.4.16.4 M Belongs to the peptidase S11 family
EKDOCJBM_01571 6e-230 dacA 3.4.16.4 M Belongs to the peptidase S11 family
EKDOCJBM_01572 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
EKDOCJBM_01573 5.7e-138 S SseB protein N-terminal domain
EKDOCJBM_01574 3.3e-112 cysE 2.3.1.30 E serine acetyltransferase
EKDOCJBM_01576 8.1e-257 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
EKDOCJBM_01577 2.7e-67 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
EKDOCJBM_01579 9.7e-135 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
EKDOCJBM_01580 2.7e-91 yacP S RNA-binding protein containing a PIN domain
EKDOCJBM_01581 4.1e-153 degV S DegV family
EKDOCJBM_01583 5.1e-22 K Transcriptional
EKDOCJBM_01584 2e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
EKDOCJBM_01585 7.3e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
EKDOCJBM_01586 2e-18
EKDOCJBM_01587 1.5e-29 K Helix-turn-helix domain
EKDOCJBM_01588 6e-85
EKDOCJBM_01589 3.2e-139 srtB 3.4.22.70 S sortase, SrtB family
EKDOCJBM_01590 3.3e-233 capA M Bacterial capsule synthesis protein
EKDOCJBM_01591 6.1e-39 gcvR T UPF0237 protein
EKDOCJBM_01592 6.6e-243 XK27_08635 S UPF0210 protein
EKDOCJBM_01593 7.3e-132 ais G Phosphoglycerate mutase
EKDOCJBM_01594 8.2e-140 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
EKDOCJBM_01595 3.2e-101 acmA 3.2.1.17, 3.4.17.14, 3.5.1.28 NU Muramidase (Flagellum-specific)
EKDOCJBM_01596 3.7e-185 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
EKDOCJBM_01597 8.2e-64 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
EKDOCJBM_01598 0.0 dnaK O Heat shock 70 kDa protein
EKDOCJBM_01600 8e-189 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
EKDOCJBM_01601 2e-140 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
EKDOCJBM_01602 5.3e-136 thiD 2.7.1.35, 2.7.1.49, 2.7.4.7 H phosphomethylpyrimidine kinase
EKDOCJBM_01603 7.4e-80 hmpT S cog cog4720
EKDOCJBM_01604 0.0 XK27_09800 I Acyltransferase
EKDOCJBM_01605 9.7e-36 XK27_09805 S MORN repeat protein
EKDOCJBM_01606 1.7e-78 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
EKDOCJBM_01607 1e-248 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
EKDOCJBM_01608 5.7e-94 adk 2.7.4.3 F topology modulation protein
EKDOCJBM_01610 1.1e-173 yeiH S membrane
EKDOCJBM_01611 3.8e-90 K Cro/C1-type HTH DNA-binding domain
EKDOCJBM_01612 3.8e-155 L Replication initiation factor
EKDOCJBM_01613 1.9e-18 S Domain of unknown function (DUF3173)
EKDOCJBM_01614 1e-212 int L Belongs to the 'phage' integrase family
EKDOCJBM_01616 4.8e-235 rarA L ATPase related to the helicase subunit of the Holliday junction resolvase
EKDOCJBM_01617 8.4e-27 rpmB J Belongs to the bacterial ribosomal protein bL28 family
EKDOCJBM_01618 6.3e-44 yrzL S Belongs to the UPF0297 family
EKDOCJBM_01619 1.8e-69 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
EKDOCJBM_01620 3.2e-44 yrzB S Belongs to the UPF0473 family
EKDOCJBM_01621 7e-295 ccs S the current gene model (or a revised gene model) may contain a frame shift
EKDOCJBM_01622 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
EKDOCJBM_01623 7.5e-14
EKDOCJBM_01624 5.4e-89 XK27_10930 K acetyltransferase
EKDOCJBM_01625 2.4e-115 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
EKDOCJBM_01626 1.5e-124 yaaA S Belongs to the UPF0246 family
EKDOCJBM_01627 6.4e-168 XK27_01785 S cog cog1284
EKDOCJBM_01628 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
EKDOCJBM_01630 7e-242 hisS 6.1.1.21 J histidyl-tRNA synthetase
EKDOCJBM_01631 2.7e-239 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
EKDOCJBM_01632 1.9e-219 metE 2.1.1.14 E Methionine synthase
EKDOCJBM_01633 1.5e-25 rpmF J Belongs to the bacterial ribosomal protein bL32 family
EKDOCJBM_01634 6.7e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
EKDOCJBM_01635 2.5e-07
EKDOCJBM_01638 1.5e-117 nudL L hydrolase
EKDOCJBM_01639 6.3e-54 K transcriptional regulator, PadR family
EKDOCJBM_01640 2e-63 XK27_06920 S Protein of unknown function (DUF1700)
EKDOCJBM_01641 3.6e-109 S Putative adhesin
EKDOCJBM_01642 8.1e-159 XK27_06930 V domain protein
EKDOCJBM_01643 9.9e-97 XK27_06935 K transcriptional regulator
EKDOCJBM_01644 4.1e-54 ypaA M Membrane
EKDOCJBM_01645 1.9e-10
EKDOCJBM_01646 4.5e-161 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
EKDOCJBM_01647 5.6e-128 adcB P ABC transporter (Permease
EKDOCJBM_01648 9.2e-135 adcC P ABC transporter, ATP-binding protein
EKDOCJBM_01649 5.9e-71 adcR K transcriptional
EKDOCJBM_01650 2.8e-182 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
EKDOCJBM_01651 6.2e-157 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
EKDOCJBM_01652 2.7e-26
EKDOCJBM_01653 4.1e-167 oppF P Belongs to the ABC transporter superfamily
EKDOCJBM_01654 6.6e-198 oppD P Belongs to the ABC transporter superfamily
EKDOCJBM_01655 1.9e-165 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
EKDOCJBM_01656 9.7e-161 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
EKDOCJBM_01657 2.3e-311 oppA E ABC transporter substrate-binding protein
EKDOCJBM_01658 1e-273 sufB O assembly protein SufB
EKDOCJBM_01659 2.3e-72 nifU C SUF system FeS assembly protein, NifU family
EKDOCJBM_01660 1.7e-237 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
EKDOCJBM_01661 6.3e-235 sufD O assembly protein SufD
EKDOCJBM_01662 1.7e-137 sufC O ABC-type transport system involved in Fe-S cluster assembly, ATPase component
EKDOCJBM_01663 1e-183 tagO 2.7.8.33, 2.7.8.35 M transferase
EKDOCJBM_01664 2.3e-128 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
EKDOCJBM_01665 4.4e-19 S Protein of unknown function (DUF3021)
EKDOCJBM_01666 1.5e-152 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
EKDOCJBM_01667 2e-275 glnP P ABC transporter
EKDOCJBM_01668 2.2e-123 glnQ E abc transporter atp-binding protein
EKDOCJBM_01669 1.1e-182 D nuclear chromosome segregation
EKDOCJBM_01670 1.8e-83 V VanZ like family
EKDOCJBM_01671 9.2e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
EKDOCJBM_01672 2.9e-194 yhjX P Major Facilitator
EKDOCJBM_01673 2.9e-111 fnr5 K Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
EKDOCJBM_01674 3.3e-112 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
EKDOCJBM_01675 8.7e-237 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
EKDOCJBM_01676 0.0 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
EKDOCJBM_01678 1.7e-134 agrA KT Response regulator of the LytR AlgR family
EKDOCJBM_01679 5.2e-232 2.7.13.3 T GHKL domain
EKDOCJBM_01680 1.1e-119
EKDOCJBM_01681 1.2e-115 V ATPases associated with a variety of cellular activities
EKDOCJBM_01691 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
EKDOCJBM_01692 7.8e-168 prsA 3.1.3.16, 5.2.1.8 O peptidyl-prolyl cis-trans isomerase activity
EKDOCJBM_01693 6.1e-120 yrrM 2.1.1.104 S O-Methyltransferase
EKDOCJBM_01694 1e-213 oxlT P COG0477 Permeases of the major facilitator superfamily
EKDOCJBM_01695 0.0 pepF E oligoendopeptidase F
EKDOCJBM_01696 7.5e-180 coiA 3.6.4.12 S Competence protein
EKDOCJBM_01697 4.4e-77 L transposition
EKDOCJBM_01698 1.3e-55 insK L Integrase core domain protein
EKDOCJBM_01699 7.3e-163 S CHAP domain
EKDOCJBM_01700 5.1e-308 S Glucan-binding protein C
EKDOCJBM_01701 2.7e-105 S CAAX amino terminal protease family protein
EKDOCJBM_01702 4.7e-168 K transcriptional regulator (lysR family)
EKDOCJBM_01703 9.6e-163 S reductase
EKDOCJBM_01704 0.0 XK27_10035 V abc transporter atp-binding protein
EKDOCJBM_01705 1.1e-290 yfiB1 V abc transporter atp-binding protein
EKDOCJBM_01706 1.2e-98 pvaA M lytic transglycosylase activity
EKDOCJBM_01707 1.9e-178 ndpA S 37-kD nucleoid-associated bacterial protein
EKDOCJBM_01708 7.6e-233 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
EKDOCJBM_01709 4.4e-109 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
EKDOCJBM_01710 3.1e-150 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
EKDOCJBM_01711 1.4e-190 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
EKDOCJBM_01712 2.8e-108 tdk 2.7.1.21 F thymidine kinase
EKDOCJBM_01713 4.6e-188 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
EKDOCJBM_01714 4.4e-154 gst O Glutathione S-transferase
EKDOCJBM_01715 2.6e-177 nrnA 3.1.13.3, 3.1.3.7 S domain protein
EKDOCJBM_01716 2.3e-173 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
EKDOCJBM_01717 4.4e-45 rpmE2 J 50S ribosomal protein L31
EKDOCJBM_01718 1.8e-229 mntH P Mn2 and Fe2 transporters of the NRAMP family
EKDOCJBM_01719 7.6e-164 ypuA S secreted protein
EKDOCJBM_01720 3.9e-74 yaeR E COG0346 Lactoylglutathione lyase and related lyases
EKDOCJBM_01721 3.2e-133 srtA 3.4.22.70 M Sortase (surface protein transpeptidase)
EKDOCJBM_01722 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
EKDOCJBM_01723 4.1e-181 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
EKDOCJBM_01724 1.4e-256 noxE P NADH oxidase
EKDOCJBM_01725 1.1e-294 yfmM S abc transporter atp-binding protein
EKDOCJBM_01726 6.1e-83 XK27_01265 S ECF-type riboflavin transporter, S component
EKDOCJBM_01727 1.3e-143 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
EKDOCJBM_01728 5e-82 S ECF-type riboflavin transporter, S component
EKDOCJBM_01730 9.4e-239 XK27_08130 K Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
EKDOCJBM_01731 7e-56 nrdD_1 1.1.98.6, 1.17.4.1 F Ribonucleoside-triphosphate reductase
EKDOCJBM_01733 1.2e-109 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
EKDOCJBM_01734 5.8e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
EKDOCJBM_01735 1.8e-47 veg S Biofilm formation stimulator VEG
EKDOCJBM_01736 1e-246 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
EKDOCJBM_01737 2.2e-73 rplI J binds to the 23S rRNA
EKDOCJBM_01738 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
EKDOCJBM_01739 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
EKDOCJBM_01740 1.3e-78 F NUDIX domain
EKDOCJBM_01741 2.4e-99 yvbG U UPF0056 membrane protein
EKDOCJBM_01742 5.1e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
EKDOCJBM_01743 0.0 S Bacterial membrane protein, YfhO
EKDOCJBM_01744 5.8e-73 isaA GH23 M Immunodominant staphylococcal antigen A
EKDOCJBM_01745 5.7e-74 lytE M LysM domain protein
EKDOCJBM_01746 6.3e-132 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
EKDOCJBM_01747 2.4e-153 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
EKDOCJBM_01748 1.1e-150 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
EKDOCJBM_01749 4.1e-90 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
EKDOCJBM_01750 3.3e-134 S sequence-specific DNA binding
EKDOCJBM_01751 2.8e-243 ymfH S Peptidase M16
EKDOCJBM_01752 4.8e-235 ymfF S Peptidase M16
EKDOCJBM_01753 8.9e-60 yaaA S S4 domain protein YaaA
EKDOCJBM_01754 1e-204 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
EKDOCJBM_01755 5.6e-275 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
EKDOCJBM_01756 2.8e-193 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
EKDOCJBM_01757 2.2e-154 yvjA S membrane
EKDOCJBM_01758 5.1e-306 ybiT S abc transporter atp-binding protein
EKDOCJBM_01759 0.0 XK27_10405 S Bacterial membrane protein YfhO
EKDOCJBM_01762 5e-95 queF 1.7.1.13 S Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily
EKDOCJBM_01763 1.2e-134 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
EKDOCJBM_01764 1.8e-83 queD 4.1.2.50, 4.2.3.12 H synthase
EKDOCJBM_01765 1.2e-123 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
EKDOCJBM_01766 2.3e-63 tdcF 3.5.99.10 J endoribonuclease L-PSP
EKDOCJBM_01767 4.3e-201 pmrB EGP Major facilitator Superfamily
EKDOCJBM_01768 4.1e-18
EKDOCJBM_01769 8.4e-262 asnS 6.1.1.22 J Catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
EKDOCJBM_01770 1.1e-212 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
EKDOCJBM_01771 1.1e-81 ypmB S Protein conserved in bacteria
EKDOCJBM_01772 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
EKDOCJBM_01773 2.8e-122 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
EKDOCJBM_01774 3.5e-169 yufQ S Belongs to the binding-protein-dependent transport system permease family
EKDOCJBM_01775 1.3e-177 yufP S Belongs to the binding-protein-dependent transport system permease family
EKDOCJBM_01776 4.1e-281 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
EKDOCJBM_01777 2.5e-192 tcsA S membrane
EKDOCJBM_01778 2.5e-68 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
EKDOCJBM_01779 3.2e-113 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
EKDOCJBM_01780 8.6e-232 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
EKDOCJBM_01781 4.6e-103 rsmC 2.1.1.172 J Methyltransferase small domain protein
EKDOCJBM_01782 3.6e-171 coaA 2.7.1.33 F Pantothenic acid kinase
EKDOCJBM_01783 1e-29 rpsT J Binds directly to 16S ribosomal RNA
EKDOCJBM_01784 9.5e-240 T PhoQ Sensor
EKDOCJBM_01785 9.4e-121 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
EKDOCJBM_01786 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
EKDOCJBM_01787 1.9e-113 coaB 4.1.1.36, 6.3.2.5 H Phosphopantothenate-cysteine ligase
EKDOCJBM_01788 1.8e-90 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
EKDOCJBM_01789 6.4e-94 panT S ECF transporter, substrate-specific component
EKDOCJBM_01790 3.8e-91 panT S Psort location CytoplasmicMembrane, score
EKDOCJBM_01791 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
EKDOCJBM_01792 7.6e-12 M Putative cell wall binding repeat
EKDOCJBM_01793 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
EKDOCJBM_01794 1.6e-240 S dextransucrase activity
EKDOCJBM_01796 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
EKDOCJBM_01798 1.7e-107 yhfC S Putative membrane peptidase family (DUF2324)
EKDOCJBM_01799 1.1e-43 czrA K helix_turn_helix, Arsenical Resistance Operon Repressor
EKDOCJBM_01800 1.8e-14 S integral membrane protein
EKDOCJBM_01801 6.3e-193 mccF V LD-carboxypeptidase
EKDOCJBM_01802 9e-08 S Enterocin A Immunity
EKDOCJBM_01803 0.0 pepO 3.4.24.71 O Peptidase family M13
EKDOCJBM_01804 2.4e-34 S Immunity protein 41
EKDOCJBM_01805 0.0 M Putative cell wall binding repeat
EKDOCJBM_01806 2.8e-227 thrE K Psort location CytoplasmicMembrane, score
EKDOCJBM_01807 1.5e-80 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
EKDOCJBM_01808 5.1e-139 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
EKDOCJBM_01809 4.7e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
EKDOCJBM_01810 7.1e-207 rny D Endoribonuclease that initiates mRNA decay
EKDOCJBM_01811 4e-112 fruR K transcriptional
EKDOCJBM_01812 7.6e-166 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
EKDOCJBM_01813 0.0 fruA 2.7.1.202 G phosphotransferase system
EKDOCJBM_01814 1.1e-261 gor 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
EKDOCJBM_01815 1.2e-241 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
EKDOCJBM_01817 8e-213 iscS2 2.8.1.7 E Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes
EKDOCJBM_01818 1.7e-224 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
EKDOCJBM_01819 1.1e-294 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
EKDOCJBM_01820 8e-257 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
EKDOCJBM_01821 5.8e-97 2.3.1.128 K acetyltransferase
EKDOCJBM_01822 3.4e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
EKDOCJBM_01823 1.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
EKDOCJBM_01824 4.5e-134 ydaF_2 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
EKDOCJBM_01825 5e-63 WQ51_03320 S cog cog4835
EKDOCJBM_01826 2.9e-151 XK27_08360 S EDD domain protein, DegV family
EKDOCJBM_01827 1.3e-139 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
EKDOCJBM_01828 2e-222 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
EKDOCJBM_01829 0.0 yfmR S abc transporter atp-binding protein
EKDOCJBM_01830 5e-26 U response to pH
EKDOCJBM_01831 1.5e-130 3.6.1.13, 3.6.1.55 F AdP-ribose pyrophosphatase
EKDOCJBM_01832 1.6e-210 nadD 2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55 H adenylyltransferase
EKDOCJBM_01833 1.4e-256 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
EKDOCJBM_01834 4.2e-69 ytxH S General stress protein
EKDOCJBM_01835 3.7e-08 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
EKDOCJBM_01836 9.6e-149 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
EKDOCJBM_01837 5e-165 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
EKDOCJBM_01838 2.2e-41 pspC KT PspC domain
EKDOCJBM_01839 2.7e-84 ydcK S Belongs to the SprT family
EKDOCJBM_01840 0.0 yhgF K Transcriptional accessory protein
EKDOCJBM_01842 3.5e-155 XK27_03015 S permease
EKDOCJBM_01843 1.9e-147 ycgQ S TIGR03943 family
EKDOCJBM_01844 1.3e-285 sulP P Sulfate permease and related transporters (MFS superfamily)
EKDOCJBM_01845 5.2e-102
EKDOCJBM_01846 1.4e-118 estA E GDSL-like Lipase/Acylhydrolase
EKDOCJBM_01847 4.7e-95 S CAAX protease self-immunity
EKDOCJBM_01848 1e-49
EKDOCJBM_01850 1.7e-63 yqeB S Pyrimidine dimer DNA glycosylase
EKDOCJBM_01851 2.7e-59 S Protein of unknown function (DUF1722)
EKDOCJBM_01852 2.2e-19 S Bacterial lipoprotein
EKDOCJBM_01853 6.8e-11
EKDOCJBM_01854 8.6e-123 V CAAX protease self-immunity
EKDOCJBM_01855 6.4e-48
EKDOCJBM_01856 2.1e-76 K TetR family transcriptional regulator
EKDOCJBM_01857 2.9e-81 Q Methyltransferase domain
EKDOCJBM_01858 2.1e-131 ybbA S Putative esterase
EKDOCJBM_01859 4.7e-172 fatB P COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
EKDOCJBM_01860 9.8e-135 fecE 3.6.3.34 HP ABC transporter
EKDOCJBM_01861 8.2e-156 fecD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
EKDOCJBM_01862 6.6e-131 V CAAX protease self-immunity
EKDOCJBM_01863 1.6e-157 S Domain of unknown function (DUF4300)
EKDOCJBM_01864 1.9e-95 tetR K transcriptional regulator
EKDOCJBM_01865 3.5e-292 norB P Major facilitator superfamily

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)