ORF_ID e_value Gene_name EC_number CAZy COGs Description
CPDACHDF_00001 4.6e-40 G Bacterial extracellular solute-binding protein
CPDACHDF_00002 6e-42 gcvR T Belongs to the UPF0237 family
CPDACHDF_00003 7.2e-22 glf 5.4.99.9 M UDP-galactopyranose mutase
CPDACHDF_00004 2.3e-12 sftA D Belongs to the FtsK SpoIIIE SftA family
CPDACHDF_00005 1.4e-50 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
CPDACHDF_00006 2.6e-16 yhjX EGP Major facilitator Superfamily
CPDACHDF_00007 1.9e-30 S COG NOG14552 non supervised orthologous group
CPDACHDF_00008 7.7e-32
CPDACHDF_00009 7.4e-08 C Aldo/keto reductase family
CPDACHDF_00010 8.5e-43 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CPDACHDF_00011 6.9e-50 xerD D recombinase XerD
CPDACHDF_00012 4.4e-24 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CPDACHDF_00013 1.6e-08 K Psort location Cytoplasmic, score
CPDACHDF_00014 6.8e-38 P Binding-protein-dependent transport system inner membrane component
CPDACHDF_00015 2.1e-12 dcuC P Responsible for the transport of C4-dicarboxylates during anaerobic growth
CPDACHDF_00016 9.3e-13 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
CPDACHDF_00017 2.5e-33 hom 1.1.1.3 E Homoserine dehydrogenase
CPDACHDF_00018 2.4e-38 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CPDACHDF_00019 2.5e-08 glnA 6.3.1.2 E glutamine synthetase
CPDACHDF_00020 6.8e-33 L transposase activity
CPDACHDF_00021 1.5e-103 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
CPDACHDF_00022 6e-128 K acetyltransferase
CPDACHDF_00023 6.4e-198 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CPDACHDF_00024 1e-162 metQ M NLPA lipoprotein
CPDACHDF_00025 8.3e-221 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CPDACHDF_00026 1.1e-110 metI P Psort location CytoplasmicMembrane, score 9.99
CPDACHDF_00027 1.2e-232 mtnE 2.6.1.83 E Aminotransferase class I and II
CPDACHDF_00028 4.1e-113 papP E Binding-protein-dependent transport system inner membrane component
CPDACHDF_00029 2.7e-123 glnP E Binding-protein-dependent transport system inner membrane component
CPDACHDF_00030 1.8e-159 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
CPDACHDF_00031 1.6e-163 cjaA ET Bacterial periplasmic substrate-binding proteins
CPDACHDF_00032 9.7e-137 XK27_08050 O prohibitin homologues
CPDACHDF_00033 3.1e-161 S Patatin-like phospholipase
CPDACHDF_00034 1.5e-146 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
CPDACHDF_00035 2.3e-175 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
CPDACHDF_00036 2.7e-120 S Vitamin K epoxide reductase
CPDACHDF_00037 1.7e-167 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
CPDACHDF_00038 2.5e-17 S Protein of unknown function (DUF3107)
CPDACHDF_00039 2.7e-266 mphA S Aminoglycoside phosphotransferase
CPDACHDF_00040 3.4e-302 uvrD2 3.6.4.12 L DNA helicase
CPDACHDF_00041 1.7e-259 S Zincin-like metallopeptidase
CPDACHDF_00042 1.2e-182 lon T Belongs to the peptidase S16 family
CPDACHDF_00043 9.1e-74 S Protein of unknown function (DUF3052)
CPDACHDF_00044 4.1e-81
CPDACHDF_00046 1.2e-283 2.7.11.1 NU Tfp pilus assembly protein FimV
CPDACHDF_00047 7e-220 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
CPDACHDF_00048 2.4e-228 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
CPDACHDF_00049 0.0 I acetylesterase activity
CPDACHDF_00050 5.7e-132 recO L Involved in DNA repair and RecF pathway recombination
CPDACHDF_00051 1.7e-153 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CPDACHDF_00053 4.7e-235 iunH1 3.2.2.1 F nucleoside hydrolase
CPDACHDF_00054 1.2e-194 P NMT1/THI5 like
CPDACHDF_00055 5.4e-147 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
CPDACHDF_00056 0.0 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
CPDACHDF_00057 3.6e-249 lacY P LacY proton/sugar symporter
CPDACHDF_00058 1e-201 K helix_turn _helix lactose operon repressor
CPDACHDF_00059 5.1e-60 S Thiamine-binding protein
CPDACHDF_00060 8.1e-293 thiE 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
CPDACHDF_00061 1.1e-98 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
CPDACHDF_00062 2.6e-296 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
CPDACHDF_00063 2.6e-249 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CPDACHDF_00064 1e-221 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CPDACHDF_00065 1.3e-79 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
CPDACHDF_00066 9.9e-43 yggT S YGGT family
CPDACHDF_00067 4.4e-33 tccB2 V DivIVA protein
CPDACHDF_00068 1.7e-96 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CPDACHDF_00069 2.2e-176 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
CPDACHDF_00071 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
CPDACHDF_00072 1.6e-255 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
CPDACHDF_00073 2.4e-225 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
CPDACHDF_00074 2.3e-110 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
CPDACHDF_00075 1.6e-124
CPDACHDF_00076 2.4e-121 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
CPDACHDF_00077 4.4e-132 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
CPDACHDF_00078 1.2e-186 S Uncharacterized protein conserved in bacteria (DUF2252)
CPDACHDF_00079 2.6e-263 glnA2 6.3.1.2 E glutamine synthetase
CPDACHDF_00080 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
CPDACHDF_00081 1.2e-117 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
CPDACHDF_00082 1e-279 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CPDACHDF_00083 1.2e-174 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
CPDACHDF_00084 2.1e-166 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
CPDACHDF_00085 3.7e-128 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CPDACHDF_00086 2.1e-10 M LysM domain
CPDACHDF_00087 9.5e-97 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CPDACHDF_00088 2.7e-227 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
CPDACHDF_00089 0.0 L DNA helicase
CPDACHDF_00090 9.3e-86 mraZ K Belongs to the MraZ family
CPDACHDF_00091 3.1e-195 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
CPDACHDF_00092 9.5e-92 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
CPDACHDF_00093 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
CPDACHDF_00094 8.7e-159 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CPDACHDF_00095 6.7e-260 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
CPDACHDF_00096 6.3e-207 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CPDACHDF_00097 3.9e-273 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CPDACHDF_00098 1.4e-256 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
CPDACHDF_00099 2.1e-163 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CPDACHDF_00100 8.6e-287 murC 6.3.2.8 M Belongs to the MurCDEF family
CPDACHDF_00101 1e-222 ftsQ 6.3.2.4 D Cell division protein FtsQ
CPDACHDF_00102 2.9e-160 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
CPDACHDF_00103 3.1e-59 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
CPDACHDF_00104 8.8e-193 dppB EP Binding-protein-dependent transport system inner membrane component
CPDACHDF_00105 1.2e-206 dppC EP Binding-protein-dependent transport system inner membrane component
CPDACHDF_00106 0.0 P Belongs to the ABC transporter superfamily
CPDACHDF_00109 0.0 xkdG S Caudovirus prohead serine protease
CPDACHDF_00114 6.4e-229 T AAA domain
CPDACHDF_00115 1.6e-28
CPDACHDF_00121 4.2e-211 int8 L Phage integrase family
CPDACHDF_00122 1.3e-84 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
CPDACHDF_00123 1.5e-169 2.7.1.4 G pfkB family carbohydrate kinase
CPDACHDF_00124 4.8e-224 GK ROK family
CPDACHDF_00125 8.8e-98 3.6.1.55 F NUDIX domain
CPDACHDF_00126 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
CPDACHDF_00127 1.5e-149
CPDACHDF_00128 2.9e-186 2.7.13.3 T Histidine kinase
CPDACHDF_00129 5e-116 gerE KT cheY-homologous receiver domain
CPDACHDF_00130 1.1e-297 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
CPDACHDF_00131 1.1e-200 V Acetyltransferase (GNAT) domain
CPDACHDF_00132 4.6e-296 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CPDACHDF_00133 1.5e-127 sigH K Belongs to the sigma-70 factor family. ECF subfamily
CPDACHDF_00134 6e-54
CPDACHDF_00135 1.1e-197 galM 5.1.3.3 G Aldose 1-epimerase
CPDACHDF_00136 6.5e-179 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
CPDACHDF_00137 8.5e-90 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CPDACHDF_00138 7.4e-208 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
CPDACHDF_00139 6.8e-150 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
CPDACHDF_00140 4.9e-101 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CPDACHDF_00141 6.1e-25 rpmI J Ribosomal protein L35
CPDACHDF_00142 1.5e-62 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CPDACHDF_00143 4.8e-168 xerD D recombinase XerD
CPDACHDF_00144 1.2e-152 soj D CobQ CobB MinD ParA nucleotide binding domain protein
CPDACHDF_00145 2.6e-157 nrtR 3.6.1.55 F NUDIX hydrolase
CPDACHDF_00146 4.8e-260 naiP U Sugar (and other) transporter
CPDACHDF_00147 0.0 typA T Elongation factor G C-terminus
CPDACHDF_00148 3.7e-102
CPDACHDF_00149 2.8e-218 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
CPDACHDF_00150 5.5e-211 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
CPDACHDF_00151 4e-40
CPDACHDF_00152 0.0 MV MacB-like periplasmic core domain
CPDACHDF_00153 3.4e-149 V ABC transporter, ATP-binding protein
CPDACHDF_00154 6.2e-179 xerC D Belongs to the 'phage' integrase family. XerC subfamily
CPDACHDF_00155 0.0 E ABC transporter, substrate-binding protein, family 5
CPDACHDF_00156 4.7e-155 dppB EP Binding-protein-dependent transport system inner membrane component
CPDACHDF_00157 4.4e-172 dppC EP N-terminal TM domain of oligopeptide transport permease C
CPDACHDF_00158 0.0 dppD P Belongs to the ABC transporter superfamily
CPDACHDF_00159 9.8e-118
CPDACHDF_00160 4.8e-170 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
CPDACHDF_00161 3.3e-155 S Protein of unknown function (DUF3710)
CPDACHDF_00162 1.7e-137 S Protein of unknown function (DUF3159)
CPDACHDF_00163 7.2e-258 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CPDACHDF_00164 7e-104
CPDACHDF_00165 0.0 ctpE P E1-E2 ATPase
CPDACHDF_00166 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CPDACHDF_00167 1.7e-35
CPDACHDF_00168 8.7e-124 maa 2.3.1.18, 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
CPDACHDF_00169 1.3e-251 S Protein of unknown function DUF262
CPDACHDF_00170 2.8e-254 tnpA L Transposase
CPDACHDF_00171 1.6e-151 S Protein of unknown function DUF262
CPDACHDF_00172 3.1e-116 K helix_turn_helix, Lux Regulon
CPDACHDF_00173 1.1e-212 T Histidine kinase
CPDACHDF_00174 4.2e-186 V ATPases associated with a variety of cellular activities
CPDACHDF_00175 7.5e-236 V ABC-2 family transporter protein
CPDACHDF_00176 6.1e-233 V ABC-2 family transporter protein
CPDACHDF_00177 8.5e-198 dapB 1.4.1.12, 1.4.1.16, 1.4.1.26 S Dihydrodipicolinate reductase, N-terminus
CPDACHDF_00179 1.3e-142 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
CPDACHDF_00180 1.1e-291 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
CPDACHDF_00181 6.8e-195 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CPDACHDF_00182 0.0 ftsK D FtsK SpoIIIE family protein
CPDACHDF_00183 7.7e-120 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CPDACHDF_00184 4.2e-107 cinA 3.5.1.42 S Belongs to the CinA family
CPDACHDF_00185 8.6e-88 K Helix-turn-helix XRE-family like proteins
CPDACHDF_00186 1e-43 S Protein of unknown function (DUF3046)
CPDACHDF_00187 1e-207 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CPDACHDF_00188 2.6e-112 recX S Modulates RecA activity
CPDACHDF_00190 7.1e-124 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CPDACHDF_00191 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
CPDACHDF_00192 6.9e-195 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CPDACHDF_00193 2.2e-99
CPDACHDF_00194 4.9e-139 plsC2 2.3.1.51 I Phosphate acyltransferases
CPDACHDF_00195 0.0 pknL 2.7.11.1 KLT PASTA
CPDACHDF_00196 2.7e-202 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
CPDACHDF_00197 4e-130
CPDACHDF_00198 1.6e-186 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
CPDACHDF_00199 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
CPDACHDF_00200 2.3e-226 2.4.1.345 GT4 M Glycosyl transferase 4-like domain
CPDACHDF_00201 1.2e-219 G Major Facilitator Superfamily
CPDACHDF_00202 4.7e-69 G Major facilitator superfamily
CPDACHDF_00203 2.2e-68 G Major facilitator superfamily
CPDACHDF_00204 0.0 lhr L DEAD DEAH box helicase
CPDACHDF_00205 3.4e-172 glcU G Sugar transport protein
CPDACHDF_00206 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
CPDACHDF_00207 2.5e-215 S Type I phosphodiesterase / nucleotide pyrophosphatase
CPDACHDF_00208 1.6e-244 S Protein of unknown function (DUF3071)
CPDACHDF_00209 1.8e-47 S Domain of unknown function (DUF4193)
CPDACHDF_00210 1.2e-82 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
CPDACHDF_00211 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CPDACHDF_00212 1.6e-102 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CPDACHDF_00213 8.6e-179 metQ P NLPA lipoprotein
CPDACHDF_00214 6.2e-238 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CPDACHDF_00215 1.3e-120 metI P Binding-protein-dependent transport system inner membrane component
CPDACHDF_00216 2e-227 S Peptidase dimerisation domain
CPDACHDF_00217 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CPDACHDF_00218 5.4e-32
CPDACHDF_00219 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
CPDACHDF_00220 9.5e-177 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CPDACHDF_00221 9.3e-258 rnd 3.1.13.5 J 3'-5' exonuclease
CPDACHDF_00222 1.5e-226 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
CPDACHDF_00223 1.3e-252 clcA_2 P Voltage gated chloride channel
CPDACHDF_00224 1.3e-113 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
CPDACHDF_00225 4.3e-124 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
CPDACHDF_00226 1.1e-250 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CPDACHDF_00229 4.2e-244 patB 4.4.1.8 E Aminotransferase, class I II
CPDACHDF_00230 3.7e-252 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
CPDACHDF_00231 4.7e-151 fmt2 3.2.2.10 S Belongs to the LOG family
CPDACHDF_00232 1.3e-122 safC S O-methyltransferase
CPDACHDF_00233 8.8e-173 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
CPDACHDF_00234 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
CPDACHDF_00235 1.3e-218 dprA 5.99.1.2 LU DNA recombination-mediator protein A
CPDACHDF_00236 1.1e-276 comM O Magnesium chelatase, subunit ChlI C-terminal
CPDACHDF_00237 2.2e-87 yraN L Belongs to the UPF0102 family
CPDACHDF_00238 8.6e-167 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
CPDACHDF_00239 8.8e-256 metY 2.5.1.49 E Aminotransferase class-V
CPDACHDF_00240 1.3e-10 metY 2.5.1.49 E Aminotransferase class-V
CPDACHDF_00241 1.8e-292 3.6.3.24 P AAA domain, putative AbiEii toxin, Type IV TA system
CPDACHDF_00242 1.9e-96 ecfT P transmembrane transporter activity
CPDACHDF_00243 8.1e-171 V ABC transporter, ATP-binding protein
CPDACHDF_00244 0.0 MV MacB-like periplasmic core domain
CPDACHDF_00245 1.4e-119 K helix_turn_helix, Lux Regulon
CPDACHDF_00246 0.0 tcsS2 T Histidine kinase
CPDACHDF_00247 1.3e-270 pip 3.4.11.5 S alpha/beta hydrolase fold
CPDACHDF_00248 6.5e-145 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CPDACHDF_00249 1e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
CPDACHDF_00250 2.1e-58 S Cupin 2, conserved barrel domain protein
CPDACHDF_00251 2.6e-30
CPDACHDF_00252 2.1e-215 lipA I Hydrolase, alpha beta domain protein
CPDACHDF_00253 8.2e-260 rutG F Permease family
CPDACHDF_00254 4.9e-199 MA20_14895 S Conserved hypothetical protein 698
CPDACHDF_00255 1.7e-308 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
CPDACHDF_00256 2.2e-148 S Belongs to the short-chain dehydrogenases reductases (SDR) family
CPDACHDF_00257 0.0 pacS 3.6.3.54 P E1-E2 ATPase
CPDACHDF_00258 7.2e-194 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CPDACHDF_00259 1.4e-251 brnQ U Component of the transport system for branched-chain amino acids
CPDACHDF_00260 1.5e-39 pepE 3.4.13.21 E Peptidase family S51
CPDACHDF_00261 6.1e-282 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CPDACHDF_00262 4.8e-148 pgl 3.1.1.31 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
CPDACHDF_00263 8.8e-181 opcA G Glucose-6-phosphate dehydrogenase subunit
CPDACHDF_00264 0.0 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CPDACHDF_00265 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
CPDACHDF_00266 7.2e-40 feoA P FeoA
CPDACHDF_00267 1.2e-280 aspA 4.3.1.1 E Fumarase C C-terminus
CPDACHDF_00268 1.1e-80 F Nucleoside 2-deoxyribosyltransferase
CPDACHDF_00269 1.5e-89 K Winged helix DNA-binding domain
CPDACHDF_00271 6.3e-99 S AAA domain, putative AbiEii toxin, Type IV TA system
CPDACHDF_00272 9.4e-72 V (ABC) transporter
CPDACHDF_00273 5.8e-32 V ABC transporter transmembrane region
CPDACHDF_00274 0.0 cstA T 5TM C-terminal transporter carbon starvation CstA
CPDACHDF_00275 4.5e-15 ybdD S Selenoprotein, putative
CPDACHDF_00276 6.1e-225 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
CPDACHDF_00277 0.0 S Uncharacterised protein family (UPF0182)
CPDACHDF_00278 7.1e-110 2.3.1.183 M Acetyltransferase (GNAT) domain
CPDACHDF_00279 4.6e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
CPDACHDF_00280 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CPDACHDF_00282 9.8e-129 ssuB P ATPases associated with a variety of cellular activities
CPDACHDF_00283 4.6e-177 P NMT1-like family
CPDACHDF_00284 1.1e-164 ssuC U Binding-protein-dependent transport system inner membrane component
CPDACHDF_00285 2e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CPDACHDF_00286 5.6e-98 divIC D Septum formation initiator
CPDACHDF_00287 1.4e-110 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
CPDACHDF_00288 2.6e-170 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
CPDACHDF_00290 1e-105
CPDACHDF_00291 2.2e-287 sdaA 4.3.1.17 E Serine dehydratase alpha chain
CPDACHDF_00292 1.1e-74 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
CPDACHDF_00293 1.2e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CPDACHDF_00294 8.8e-135 yplQ S Haemolysin-III related
CPDACHDF_00295 1.7e-284 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
CPDACHDF_00296 1.9e-46 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
CPDACHDF_00297 1.5e-247 D FtsK/SpoIIIE family
CPDACHDF_00298 3.5e-185 K Cell envelope-related transcriptional attenuator domain
CPDACHDF_00299 5.4e-238 K Cell envelope-related transcriptional attenuator domain
CPDACHDF_00300 0.0 S Glycosyl transferase, family 2
CPDACHDF_00301 3.1e-276
CPDACHDF_00302 5.6e-55 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
CPDACHDF_00303 7.9e-154 cof 5.2.1.8 T Eukaryotic phosphomannomutase
CPDACHDF_00304 1.3e-145 ctsW S Phosphoribosyl transferase domain
CPDACHDF_00305 1.2e-202 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
CPDACHDF_00306 8.2e-131 T Response regulator receiver domain protein
CPDACHDF_00307 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
CPDACHDF_00308 6.6e-102 carD K CarD-like/TRCF domain
CPDACHDF_00309 1.9e-89 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
CPDACHDF_00310 1.7e-143 znuB U ABC 3 transport family
CPDACHDF_00311 5.1e-170 znuC P ATPases associated with a variety of cellular activities
CPDACHDF_00312 7.3e-186 P Zinc-uptake complex component A periplasmic
CPDACHDF_00313 3.1e-164 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CPDACHDF_00314 1.1e-267
CPDACHDF_00315 3.8e-119 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CPDACHDF_00316 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
CPDACHDF_00317 2.5e-178 terC P Integral membrane protein, TerC family
CPDACHDF_00318 1.4e-275 pyk 2.7.1.40 G Pyruvate kinase
CPDACHDF_00320 2.6e-120 aspA 3.6.1.13 L NUDIX domain
CPDACHDF_00321 7.1e-117 pdtaR T Response regulator receiver domain protein
CPDACHDF_00323 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CPDACHDF_00324 8.3e-184 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
CPDACHDF_00325 5.7e-123 3.6.1.13 L NUDIX domain
CPDACHDF_00326 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
CPDACHDF_00327 2.4e-231 ykiI
CPDACHDF_00329 4e-267 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
CPDACHDF_00330 5.7e-233 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CPDACHDF_00331 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
CPDACHDF_00332 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
CPDACHDF_00333 3.3e-302 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
CPDACHDF_00334 1.3e-69 K sequence-specific DNA binding
CPDACHDF_00335 4.6e-177 insH6 L Transposase domain (DUF772)
CPDACHDF_00336 0.0 tetP J elongation factor G
CPDACHDF_00337 2e-64 S AAA domain
CPDACHDF_00338 1e-107 adk 2.7.4.3 F adenylate kinase activity
CPDACHDF_00339 3.9e-71 K Acetyltransferase (GNAT) family
CPDACHDF_00340 3.4e-160 E -acetyltransferase
CPDACHDF_00341 1.4e-50 4.2.99.21 E Chorismate mutase type II
CPDACHDF_00342 2.3e-141
CPDACHDF_00343 7.7e-183
CPDACHDF_00344 2.2e-190 K Helix-turn-helix XRE-family like proteins
CPDACHDF_00345 2.4e-66 K helix_turn_helix gluconate operon transcriptional repressor
CPDACHDF_00346 8.7e-167 V ATPases associated with a variety of cellular activities
CPDACHDF_00347 3.9e-97 S ABC-2 family transporter protein
CPDACHDF_00348 2.3e-84 proX S Aminoacyl-tRNA editing domain
CPDACHDF_00349 1e-141 S Peptidase C26
CPDACHDF_00350 0.0 amyA 3.2.1.1 GH13 G Glycosyl hydrolase family 70
CPDACHDF_00351 4.2e-186 K TRANSCRIPTIONal
CPDACHDF_00352 4.7e-179 patB 4.4.1.8 E Aminotransferase, class I II
CPDACHDF_00353 1.8e-27 patB 4.4.1.8 E Aminotransferase, class I II
CPDACHDF_00354 1.5e-112 M Protein of unknown function (DUF3737)
CPDACHDF_00355 4e-265 pbuX F Permease family
CPDACHDF_00356 3e-91 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
CPDACHDF_00357 0.0 pcrA 3.6.4.12 L DNA helicase
CPDACHDF_00358 5.8e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CPDACHDF_00359 8.9e-63 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
CPDACHDF_00360 1.6e-128 pgm3 3.1.3.85 G Phosphoglycerate mutase family
CPDACHDF_00361 6.3e-64 WQ51_05790 S Bacterial protein of unknown function (DUF948)
CPDACHDF_00362 1.4e-34
CPDACHDF_00363 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CPDACHDF_00364 1.2e-85 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CPDACHDF_00365 1.8e-199 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CPDACHDF_00366 1.3e-37 3.4.23.43 S Type IV leader peptidase family
CPDACHDF_00367 5.4e-220 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
CPDACHDF_00368 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
CPDACHDF_00369 1.8e-70 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
CPDACHDF_00370 7.3e-191
CPDACHDF_00371 9.9e-82
CPDACHDF_00372 1.3e-80
CPDACHDF_00373 8.7e-215
CPDACHDF_00374 2e-222
CPDACHDF_00377 7e-95 amy 3.2.1.1, 3.2.1.41 CBM48,GH13 G Alpha amylase, catalytic domain
CPDACHDF_00378 2.8e-84 dexB 2.4.1.7, 3.2.1.20, 3.2.1.51, 3.2.1.70, 3.2.1.93, 3.2.1.97 GH101,GH13,GH29,GH31 M Aamy_C
CPDACHDF_00379 2.1e-185 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
CPDACHDF_00380 1.7e-48 M Aamy_C
CPDACHDF_00381 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
CPDACHDF_00382 0.0 S L,D-transpeptidase catalytic domain
CPDACHDF_00383 1.4e-289 sufB O FeS assembly protein SufB
CPDACHDF_00384 5.5e-228 sufD O FeS assembly protein SufD
CPDACHDF_00385 2.3e-142 sufC O FeS assembly ATPase SufC
CPDACHDF_00386 3.5e-241 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CPDACHDF_00387 8.9e-104 iscU C SUF system FeS assembly protein, NifU family
CPDACHDF_00388 3.5e-92 yitW S Iron-sulfur cluster assembly protein
CPDACHDF_00389 1.6e-214 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
CPDACHDF_00390 3.1e-132 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
CPDACHDF_00391 2.8e-165 spoU 2.1.1.185 J SpoU rRNA Methylase family
CPDACHDF_00393 3.2e-144 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
CPDACHDF_00394 2.5e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
CPDACHDF_00395 1.6e-213 phoH T PhoH-like protein
CPDACHDF_00396 2.5e-103 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CPDACHDF_00397 8.4e-249 corC S CBS domain
CPDACHDF_00398 3.4e-183 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CPDACHDF_00399 0.0 fadD 6.2.1.3 I AMP-binding enzyme
CPDACHDF_00400 9.7e-203 pntAA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
CPDACHDF_00401 1.2e-46 pntA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
CPDACHDF_00402 1.8e-254 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
CPDACHDF_00403 1.3e-195 S alpha beta
CPDACHDF_00404 5e-108 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
CPDACHDF_00405 5.1e-228 ilvE 2.6.1.42 E Amino-transferase class IV
CPDACHDF_00406 5.2e-139 S UPF0126 domain
CPDACHDF_00407 3.4e-34 rpsT J Binds directly to 16S ribosomal RNA
CPDACHDF_00408 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
CPDACHDF_00409 2.8e-262 hemN H Involved in the biosynthesis of porphyrin-containing compound
CPDACHDF_00410 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
CPDACHDF_00411 1.7e-306 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
CPDACHDF_00412 4.2e-80
CPDACHDF_00413 2.6e-88 bcp 1.11.1.15 O Redoxin
CPDACHDF_00414 7.8e-246 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
CPDACHDF_00415 3.4e-160 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
CPDACHDF_00416 2.7e-199 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
CPDACHDF_00417 1.5e-100 sixA 3.6.1.55 T Phosphoglycerate mutase family
CPDACHDF_00418 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
CPDACHDF_00419 1.4e-158 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
CPDACHDF_00420 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
CPDACHDF_00421 3.1e-89 yneG S Domain of unknown function (DUF4186)
CPDACHDF_00422 4.6e-188 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
CPDACHDF_00423 2e-73 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
CPDACHDF_00424 9.1e-283 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
CPDACHDF_00425 4.5e-177 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
CPDACHDF_00426 3.5e-157 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
CPDACHDF_00427 7.7e-188 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
CPDACHDF_00428 1.9e-124 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CPDACHDF_00429 8.9e-80 2.3.1.1 K Psort location Cytoplasmic, score 8.87
CPDACHDF_00430 2.8e-51 3.6.1.55 L NUDIX domain
CPDACHDF_00431 2.6e-58 ytfH K HxlR-like helix-turn-helix
CPDACHDF_00432 1.2e-182 draG O ADP-ribosylglycohydrolase
CPDACHDF_00433 1.8e-189 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
CPDACHDF_00434 1.1e-123 3.8.1.2 S Haloacid dehalogenase-like hydrolase
CPDACHDF_00435 5e-173 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
CPDACHDF_00436 0.0 trxB1 1.8.1.9 C Thioredoxin domain
CPDACHDF_00437 2e-108 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
CPDACHDF_00438 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CPDACHDF_00439 6.4e-184 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
CPDACHDF_00440 2.2e-145 4.1.1.44 S Carboxymuconolactone decarboxylase family
CPDACHDF_00441 1.9e-195 cat P Cation efflux family
CPDACHDF_00442 4.1e-300 ybiT S ABC transporter
CPDACHDF_00443 2.7e-122 S Phospholipase/Carboxylesterase
CPDACHDF_00444 2.1e-99 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
CPDACHDF_00445 9.8e-180 wcoO
CPDACHDF_00446 7e-32 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
CPDACHDF_00447 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
CPDACHDF_00448 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
CPDACHDF_00449 9.8e-177 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
CPDACHDF_00450 6e-174 rapZ S Displays ATPase and GTPase activities
CPDACHDF_00452 4.3e-175 whiA K May be required for sporulation
CPDACHDF_00453 3.1e-223 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
CPDACHDF_00454 9.5e-152 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
CPDACHDF_00455 4.7e-25 secG U Preprotein translocase SecG subunit
CPDACHDF_00456 1.1e-160 S Sucrose-6F-phosphate phosphohydrolase
CPDACHDF_00457 8.7e-309 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
CPDACHDF_00458 4.6e-91 alaR K helix_turn_helix ASNC type
CPDACHDF_00459 4e-231 yugH 2.6.1.1 E Aminotransferase class I and II
CPDACHDF_00460 1.3e-66 S PFAM Pentapeptide repeats (8 copies)
CPDACHDF_00461 1.4e-201 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CPDACHDF_00462 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
CPDACHDF_00463 3e-201 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
CPDACHDF_00464 2.8e-218 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
CPDACHDF_00465 4.2e-160 G Fructosamine kinase
CPDACHDF_00466 2.6e-150 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
CPDACHDF_00467 2.3e-158 S PAC2 family
CPDACHDF_00473 1.4e-23
CPDACHDF_00474 1.4e-95 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
CPDACHDF_00476 1.7e-98 S ATPases associated with a variety of cellular activities
CPDACHDF_00477 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CPDACHDF_00478 1.1e-116 pgsA1 2.7.8.11, 2.7.8.5 I CDP-alcohol phosphatidyltransferase
CPDACHDF_00479 1.9e-194 htrB 2.3.1.241, 2.3.1.265 M Bacterial lipid A biosynthesis acyltransferase
CPDACHDF_00480 8.2e-190 pimA 2.4.1.345 GT4 M Glycosyl transferases group 1
CPDACHDF_00481 3.6e-129 yebC K transcriptional regulatory protein
CPDACHDF_00482 2.5e-101 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
CPDACHDF_00483 1.7e-108 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
CPDACHDF_00484 5e-204 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
CPDACHDF_00485 1.4e-53 yajC U Preprotein translocase subunit
CPDACHDF_00486 1.7e-102 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CPDACHDF_00487 1.5e-222 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
CPDACHDF_00488 3.4e-166 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CPDACHDF_00489 2.1e-244
CPDACHDF_00490 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
CPDACHDF_00491 5.7e-22
CPDACHDF_00492 2e-167 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
CPDACHDF_00493 1.7e-145 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
CPDACHDF_00494 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
CPDACHDF_00496 9.1e-283 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
CPDACHDF_00497 0.0 pafB K WYL domain
CPDACHDF_00498 5.8e-36
CPDACHDF_00499 0.0 helY L DEAD DEAH box helicase
CPDACHDF_00500 3.9e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
CPDACHDF_00501 7.4e-140 pgp 3.1.3.18 S HAD-hyrolase-like
CPDACHDF_00502 8.3e-66 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CPDACHDF_00503 1.2e-64 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CPDACHDF_00504 5e-69
CPDACHDF_00505 3.1e-133 K helix_turn_helix, mercury resistance
CPDACHDF_00506 1.1e-74 garA T Inner membrane component of T3SS, cytoplasmic domain
CPDACHDF_00507 3.2e-153 S Bacterial protein of unknown function (DUF881)
CPDACHDF_00508 4.8e-33 sbp S Protein of unknown function (DUF1290)
CPDACHDF_00509 8.7e-176 S Bacterial protein of unknown function (DUF881)
CPDACHDF_00510 1.2e-109 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CPDACHDF_00511 1.2e-157 hisG 2.4.2.17 F ATP phosphoribosyltransferase
CPDACHDF_00512 2.2e-41 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
CPDACHDF_00513 4.5e-123 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
CPDACHDF_00514 7.1e-183 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CPDACHDF_00515 6.4e-162 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
CPDACHDF_00516 0.0 trpB 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
CPDACHDF_00519 8.8e-115 ung2 3.2.2.27 L Uracil DNA glycosylase superfamily
CPDACHDF_00520 1.5e-299 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CPDACHDF_00521 3.3e-76 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
CPDACHDF_00522 3.9e-139 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
CPDACHDF_00523 2.2e-134 S ABC-2 type transporter
CPDACHDF_00524 8.4e-114 nodI V ATPases associated with a variety of cellular activities
CPDACHDF_00525 1.4e-104 K WHG domain
CPDACHDF_00526 1.2e-230 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
CPDACHDF_00527 5.5e-175 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
CPDACHDF_00528 1.2e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
CPDACHDF_00529 1.3e-134 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
CPDACHDF_00530 7.5e-139 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CPDACHDF_00531 1.9e-161 rpsB J Belongs to the universal ribosomal protein uS2 family
CPDACHDF_00532 8.3e-87 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
CPDACHDF_00533 1.5e-297 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
CPDACHDF_00534 1.4e-19
CPDACHDF_00535 6.2e-210 guaB 1.1.1.205 F IMP dehydrogenase family protein
CPDACHDF_00536 9.7e-241 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
CPDACHDF_00537 2.5e-278 G ABC transporter substrate-binding protein
CPDACHDF_00538 4.9e-103 M Peptidase family M23
CPDACHDF_00539 3.6e-61
CPDACHDF_00541 1.9e-89
CPDACHDF_00543 3.6e-196 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CPDACHDF_00544 7.5e-91 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
CPDACHDF_00545 9.2e-158 yeaZ 2.3.1.234 O Glycoprotease family
CPDACHDF_00546 8e-114 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
CPDACHDF_00547 1.8e-187 holA 2.7.7.7 L DNA polymerase III delta subunit
CPDACHDF_00548 0.0 comE S Competence protein
CPDACHDF_00549 8.6e-118 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
CPDACHDF_00550 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
CPDACHDF_00551 6.1e-168 ET Bacterial periplasmic substrate-binding proteins
CPDACHDF_00552 1.2e-169 corA P CorA-like Mg2+ transporter protein
CPDACHDF_00553 3e-161 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
CPDACHDF_00554 8.3e-72 pdxH S Pfam:Pyridox_oxidase
CPDACHDF_00557 1.8e-82
CPDACHDF_00558 8e-122 gpmB 3.1.3.73, 3.1.3.85 G Phosphoglycerate mutase family
CPDACHDF_00559 4.2e-71 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
CPDACHDF_00560 1e-262 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CPDACHDF_00562 8.2e-193 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CPDACHDF_00563 7.8e-134 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CPDACHDF_00564 1.9e-115
CPDACHDF_00565 3.5e-236 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
CPDACHDF_00566 1.5e-288 thrC 4.2.3.1 E Threonine synthase N terminus
CPDACHDF_00567 3.3e-129 S Haloacid dehalogenase-like hydrolase
CPDACHDF_00568 0.0 recN L May be involved in recombinational repair of damaged DNA
CPDACHDF_00569 5.6e-183 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CPDACHDF_00570 2.7e-117 trkA P TrkA-N domain
CPDACHDF_00571 3.9e-273 trkB P Cation transport protein
CPDACHDF_00572 5.4e-144 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
CPDACHDF_00573 1.5e-194 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
CPDACHDF_00574 2.2e-158 L Tetratricopeptide repeat
CPDACHDF_00575 1.4e-256 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CPDACHDF_00576 6.2e-90 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
CPDACHDF_00577 9.5e-155 IQ Enoyl-(Acyl carrier protein) reductase
CPDACHDF_00578 3e-284 argH 4.3.2.1 E argininosuccinate lyase
CPDACHDF_00579 3.2e-239 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
CPDACHDF_00580 1.4e-90 argR K Regulates arginine biosynthesis genes
CPDACHDF_00581 2.9e-184 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
CPDACHDF_00582 3.4e-241 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
CPDACHDF_00583 3.3e-180 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
CPDACHDF_00584 5.1e-207 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
CPDACHDF_00585 6.5e-204 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
CPDACHDF_00586 1.8e-147
CPDACHDF_00587 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
CPDACHDF_00588 2.3e-177 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CPDACHDF_00589 8.7e-170 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CPDACHDF_00590 7.1e-16 V FtsX-like permease family
CPDACHDF_00591 3.4e-218 V FtsX-like permease family
CPDACHDF_00592 4.8e-131 V ABC transporter, ATP-binding protein
CPDACHDF_00593 0.0 cbiQ P ATPases associated with a variety of cellular activities
CPDACHDF_00594 3.2e-107 ykoE S ABC-type cobalt transport system, permease component
CPDACHDF_00595 1.3e-226 ytrE V lipoprotein transporter activity
CPDACHDF_00596 8.2e-162 V N-Acetylmuramoyl-L-alanine amidase
CPDACHDF_00597 2.1e-44
CPDACHDF_00598 1.3e-212 2.7.13.3 T Histidine kinase
CPDACHDF_00599 9.7e-266 argE E Peptidase dimerisation domain
CPDACHDF_00600 9.5e-104 S Protein of unknown function (DUF3043)
CPDACHDF_00601 3.4e-280 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CPDACHDF_00602 1.6e-148 S Domain of unknown function (DUF4191)
CPDACHDF_00603 7e-283 glnA 6.3.1.2 E glutamine synthetase
CPDACHDF_00604 2.6e-109 ykoE S ABC-type cobalt transport system, permease component
CPDACHDF_00605 3.2e-206 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
CPDACHDF_00606 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CPDACHDF_00607 0.0 S Tetratricopeptide repeat
CPDACHDF_00608 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CPDACHDF_00609 4e-150 bioM P ATPases associated with a variety of cellular activities
CPDACHDF_00610 1.7e-223 E Aminotransferase class I and II
CPDACHDF_00611 1.3e-134 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
CPDACHDF_00612 9.9e-98 ecfA GP ABC transporter, ATP-binding protein
CPDACHDF_00613 0.0 ecfA GP ABC transporter, ATP-binding protein
CPDACHDF_00614 8.6e-164 yvgN 1.1.1.346 S Aldo/keto reductase family
CPDACHDF_00615 2.7e-46 yhbY J CRS1_YhbY
CPDACHDF_00616 1.1e-141 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
CPDACHDF_00617 4.9e-72 yccF S Inner membrane component domain
CPDACHDF_00618 2.4e-65 S Zincin-like metallopeptidase
CPDACHDF_00619 1.3e-142 E Psort location Cytoplasmic, score 8.87
CPDACHDF_00620 1.4e-308
CPDACHDF_00622 2.5e-200 L Transposase, Mutator family
CPDACHDF_00623 0.0 fadD 6.2.1.3 I AMP-binding enzyme
CPDACHDF_00624 5.7e-267 EGP Major facilitator Superfamily
CPDACHDF_00625 7.2e-262 rarA L Recombination factor protein RarA
CPDACHDF_00626 0.0 L DEAD DEAH box helicase
CPDACHDF_00627 9.8e-188 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
CPDACHDF_00628 2.1e-202 gluD E Binding-protein-dependent transport system inner membrane component
CPDACHDF_00629 5.2e-111 gluC E Binding-protein-dependent transport system inner membrane component
CPDACHDF_00630 4.3e-155 gluB ET Belongs to the bacterial solute-binding protein 3 family
CPDACHDF_00631 3e-142 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
CPDACHDF_00632 9.6e-149 aroD S Serine aminopeptidase, S33
CPDACHDF_00633 3.7e-228 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
CPDACHDF_00634 8.7e-259 hisS 6.1.1.21 J Histidyl-tRNA synthetase
CPDACHDF_00635 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
CPDACHDF_00636 0.0 clpC O ATPase family associated with various cellular activities (AAA)
CPDACHDF_00637 5.6e-183 uspA T Belongs to the universal stress protein A family
CPDACHDF_00638 7.3e-117
CPDACHDF_00639 8.2e-210 S Protein of unknown function (DUF3027)
CPDACHDF_00640 1.2e-79 cspB K 'Cold-shock' DNA-binding domain
CPDACHDF_00641 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
CPDACHDF_00642 2.4e-133 KT Response regulator receiver domain protein
CPDACHDF_00643 5e-134
CPDACHDF_00644 6.5e-42 S Proteins of 100 residues with WXG
CPDACHDF_00645 3.5e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
CPDACHDF_00646 1.8e-33 cspA K 'Cold-shock' DNA-binding domain
CPDACHDF_00647 3.7e-80 S LytR cell envelope-related transcriptional attenuator
CPDACHDF_00648 1.5e-140 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CPDACHDF_00649 4.2e-192 moxR S ATPase family associated with various cellular activities (AAA)
CPDACHDF_00650 9.8e-180 S Protein of unknown function DUF58
CPDACHDF_00651 4.5e-83
CPDACHDF_00652 6.3e-196 S von Willebrand factor (vWF) type A domain
CPDACHDF_00653 9.3e-181 S von Willebrand factor (vWF) type A domain
CPDACHDF_00654 3.6e-87
CPDACHDF_00656 2.1e-293 S PGAP1-like protein
CPDACHDF_00657 3e-281 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
CPDACHDF_00658 0.0 S Lysylphosphatidylglycerol synthase TM region
CPDACHDF_00659 6.2e-42 hup L Belongs to the bacterial histone-like protein family
CPDACHDF_00660 5e-292 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
CPDACHDF_00661 2.5e-30 pup S Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
CPDACHDF_00662 2.4e-172 hisN 3.1.3.25 G Inositol monophosphatase family
CPDACHDF_00663 3.3e-310 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
CPDACHDF_00664 1.2e-291 arc O AAA ATPase forming ring-shaped complexes
CPDACHDF_00665 6.3e-128 apl 3.1.3.1 S SNARE associated Golgi protein
CPDACHDF_00666 3.5e-86 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
CPDACHDF_00667 1.7e-184 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CPDACHDF_00668 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CPDACHDF_00669 2.5e-255 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
CPDACHDF_00670 3.1e-215 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CPDACHDF_00671 1.6e-45 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
CPDACHDF_00672 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
CPDACHDF_00673 1.2e-114 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
CPDACHDF_00674 8.9e-181 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
CPDACHDF_00675 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CPDACHDF_00676 2.8e-240 carA 6.3.5.5 F Belongs to the CarA family
CPDACHDF_00677 9.5e-80 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CPDACHDF_00678 5.1e-104 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CPDACHDF_00679 2.6e-95
CPDACHDF_00680 7.7e-123 1.14.14.5 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CPDACHDF_00681 1.2e-232 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CPDACHDF_00682 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CPDACHDF_00683 2.5e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
CPDACHDF_00684 2.7e-61 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CPDACHDF_00686 9.4e-197 ltaE 4.1.2.48 E Beta-eliminating lyase
CPDACHDF_00687 1.7e-234 M Glycosyl transferase 4-like domain
CPDACHDF_00688 8.9e-234 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
CPDACHDF_00689 8.6e-139 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
CPDACHDF_00690 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
CPDACHDF_00691 9.9e-209 S Short C-terminal domain
CPDACHDF_00692 1.8e-107
CPDACHDF_00693 2.1e-68
CPDACHDF_00694 2.8e-126
CPDACHDF_00695 1e-226
CPDACHDF_00697 1.4e-107 2.7.1.196, 2.7.1.205 K sequence-specific DNA binding
CPDACHDF_00698 2.7e-89 S Pyridoxamine 5'-phosphate oxidase
CPDACHDF_00699 6.9e-101
CPDACHDF_00700 7.3e-215 S 50S ribosome-binding GTPase
CPDACHDF_00701 1.7e-72
CPDACHDF_00702 5.7e-280 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
CPDACHDF_00703 3e-303 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CPDACHDF_00704 3.3e-197 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
CPDACHDF_00705 2.2e-240 purD 6.3.4.13 F Belongs to the GARS family
CPDACHDF_00706 1.7e-265 S Putative esterase
CPDACHDF_00707 0.0 lysX S Uncharacterised conserved protein (DUF2156)
CPDACHDF_00708 4.8e-72 zur P Belongs to the Fur family
CPDACHDF_00709 6.3e-226 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CPDACHDF_00710 2.8e-85 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CPDACHDF_00711 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CPDACHDF_00713 3.7e-221 ybiR P Citrate transporter
CPDACHDF_00714 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
CPDACHDF_00715 1.1e-261 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CPDACHDF_00716 5.8e-102 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CPDACHDF_00717 6.6e-95 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
CPDACHDF_00718 7e-228 gldA 1.1.1.1, 1.1.1.6 C Iron-containing alcohol dehydrogenase
CPDACHDF_00719 3e-142 S 3-oxo-5-alpha-steroid 4-dehydrogenase
CPDACHDF_00720 1.2e-88 XK27_03610 K Acetyltransferase (GNAT) domain
CPDACHDF_00721 3.1e-92 doc S Fic/DOC family
CPDACHDF_00722 4.4e-94 gepA S Protein of unknown function (DUF4065)
CPDACHDF_00723 0.0 S Protein of unknown function (DUF1524)
CPDACHDF_00724 3.6e-63 mloA S Fic/DOC family
CPDACHDF_00725 0.0 KL Domain of unknown function (DUF3427)
CPDACHDF_00726 2.6e-73 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
CPDACHDF_00727 2.1e-64
CPDACHDF_00728 1.2e-58
CPDACHDF_00729 8.1e-22 M1-431 S Protein of unknown function (DUF1706)
CPDACHDF_00730 1.2e-38 M1-431 S Protein of unknown function (DUF1706)
CPDACHDF_00733 6.4e-107 J Acetyltransferase (GNAT) domain
CPDACHDF_00734 2.2e-173 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
CPDACHDF_00735 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
CPDACHDF_00736 1e-190 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
CPDACHDF_00737 1.4e-220 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
CPDACHDF_00738 3.6e-140 sapF E ATPases associated with a variety of cellular activities
CPDACHDF_00739 1.7e-140 P ATPases associated with a variety of cellular activities
CPDACHDF_00740 1.5e-155 EP Binding-protein-dependent transport system inner membrane component
CPDACHDF_00741 7.8e-169 P Binding-protein-dependent transport system inner membrane component
CPDACHDF_00742 0.0 E ABC transporter, substrate-binding protein, family 5
CPDACHDF_00743 1.1e-136 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
CPDACHDF_00744 3.2e-68
CPDACHDF_00745 5.2e-144 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
CPDACHDF_00746 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
CPDACHDF_00747 1.4e-127 K helix_turn_helix, Lux Regulon
CPDACHDF_00748 1e-181 K Psort location Cytoplasmic, score
CPDACHDF_00749 1.1e-153 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
CPDACHDF_00750 4.4e-151 yecS E Binding-protein-dependent transport system inner membrane component
CPDACHDF_00751 1.9e-167 pknD ET ABC transporter, substrate-binding protein, family 3
CPDACHDF_00752 2.3e-154 pknD ET ABC transporter, substrate-binding protein, family 3
CPDACHDF_00753 4.2e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
CPDACHDF_00754 3.3e-184 usp 3.5.1.28 CBM50 D CHAP domain protein
CPDACHDF_00755 9.4e-164 ftsX D Part of the ABC transporter FtsEX involved in cellular division
CPDACHDF_00756 3.9e-227 ftsE D Cell division ATP-binding protein FtsE
CPDACHDF_00757 5.1e-204 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CPDACHDF_00758 2.1e-169 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
CPDACHDF_00759 8.6e-84 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CPDACHDF_00760 2.2e-251 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
CPDACHDF_00761 1e-134 map 3.4.11.18 E Methionine aminopeptidase
CPDACHDF_00762 5.7e-104 S Short repeat of unknown function (DUF308)
CPDACHDF_00763 0.0 pepO 3.4.24.71 O Peptidase family M13
CPDACHDF_00764 1.2e-134 L Single-strand binding protein family
CPDACHDF_00765 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
CPDACHDF_00766 2.5e-74
CPDACHDF_00767 1.6e-277 recD2 3.6.4.12 L PIF1-like helicase
CPDACHDF_00768 2.7e-157 supH S Sucrose-6F-phosphate phosphohydrolase
CPDACHDF_00769 5.7e-123 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
CPDACHDF_00770 2.2e-290 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
CPDACHDF_00771 1.3e-197 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
CPDACHDF_00772 2.6e-115 ywlC 2.7.7.87 J Belongs to the SUA5 family
CPDACHDF_00773 3.7e-176 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
CPDACHDF_00774 4.9e-167 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CPDACHDF_00775 8.6e-36 rpmE J Binds the 23S rRNA
CPDACHDF_00776 3.6e-219 xylR GK ROK family
CPDACHDF_00777 1.7e-290 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
CPDACHDF_00778 0.0 G candidate polyfunctional acetylxylan esterase b-xylosidase A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein K01238
CPDACHDF_00779 2.3e-236 CE10 I Belongs to the type-B carboxylesterase lipase family
CPDACHDF_00780 0.0 3.1.1.53 G Glycosyl hydrolase family 2, sugar binding domain protein
CPDACHDF_00781 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
CPDACHDF_00782 3.3e-158 MA20_14020 P Binding-protein-dependent transport system inner membrane component
CPDACHDF_00783 2.9e-193 MA20_14025 U Binding-protein-dependent transport system inner membrane component
CPDACHDF_00784 8.8e-245 msmE G ABC transporter periplasmic binding protein YcjN precursor K02027
CPDACHDF_00785 4.9e-190 K Bacterial regulatory proteins, lacI family
CPDACHDF_00786 0.0 G Belongs to the glycosyl hydrolase 43 family
CPDACHDF_00787 4e-272 xylA 5.3.1.5 G Belongs to the xylose isomerase family
CPDACHDF_00788 1.4e-35 rpmE J Binds the 23S rRNA
CPDACHDF_00789 1.3e-173
CPDACHDF_00791 2.2e-133
CPDACHDF_00792 1.3e-111 ykoE S ABC-type cobalt transport system, permease component
CPDACHDF_00793 1e-256 metY 2.5.1.49 H Psort location Cytoplasmic, score 9.98
CPDACHDF_00794 3.2e-66 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
CPDACHDF_00795 7.3e-300 yjjK S ATP-binding cassette protein, ChvD family
CPDACHDF_00796 2.6e-174 tesB I Thioesterase-like superfamily
CPDACHDF_00797 2.3e-113 S Protein of unknown function (DUF3180)
CPDACHDF_00798 3e-143 folK 2.5.1.15, 2.6.1.85, 2.7.6.3, 3.5.4.16, 4.1.2.25 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CPDACHDF_00799 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CPDACHDF_00800 2.5e-98 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
CPDACHDF_00801 5.9e-216 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
CPDACHDF_00802 5.3e-237 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
CPDACHDF_00803 0.0
CPDACHDF_00804 1.3e-162 natA V ATPases associated with a variety of cellular activities
CPDACHDF_00805 2.9e-243 epsG M Glycosyl transferase family 21
CPDACHDF_00806 1.2e-294 S AI-2E family transporter
CPDACHDF_00807 1.3e-182 3.4.14.13 M Glycosyltransferase like family 2
CPDACHDF_00811 1.7e-187 K Periplasmic binding protein domain
CPDACHDF_00812 1.8e-173 G Binding-protein-dependent transport system inner membrane component
CPDACHDF_00813 6.3e-174 G ABC transporter permease
CPDACHDF_00814 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
CPDACHDF_00815 9.4e-205 G Bacterial extracellular solute-binding protein
CPDACHDF_00816 1.3e-77 S Domain of unknown function (DUF4190)
CPDACHDF_00817 7e-96 S Domain of unknown function (DUF4190)
CPDACHDF_00818 5.8e-62
CPDACHDF_00819 5.7e-117 3.8.1.2 S Haloacid dehalogenase-like hydrolase
CPDACHDF_00820 6.4e-168 lacR K Transcriptional regulator, LacI family
CPDACHDF_00821 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
CPDACHDF_00822 2.8e-274 lacS G Psort location CytoplasmicMembrane, score 10.00
CPDACHDF_00823 2.6e-64 yeaO K Protein of unknown function, DUF488
CPDACHDF_00825 1.4e-236 S Psort location Cytoplasmic, score 8.87
CPDACHDF_00826 0.0 S Psort location Cytoplasmic, score 8.87
CPDACHDF_00827 3e-145 S Domain of unknown function (DUF4194)
CPDACHDF_00828 3.3e-294 S Psort location Cytoplasmic, score 8.87
CPDACHDF_00829 1.4e-228 S Uncharacterized protein conserved in bacteria (DUF2130)
CPDACHDF_00830 1.1e-54 S Cutinase
CPDACHDF_00831 2.8e-293 L AAA ATPase domain
CPDACHDF_00832 4.6e-108
CPDACHDF_00833 7.7e-188 3.1.3.5 S 5'-nucleotidase
CPDACHDF_00834 2.8e-183 XK27_05540 S DUF218 domain
CPDACHDF_00836 1.1e-161 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
CPDACHDF_00837 3.6e-201 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
CPDACHDF_00838 5.6e-100 ptpA 3.1.3.48 T low molecular weight
CPDACHDF_00839 4.1e-132 folA 1.5.1.3 H dihydrofolate reductase
CPDACHDF_00840 1.1e-174 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CPDACHDF_00841 5.9e-73 attW O OsmC-like protein
CPDACHDF_00842 2.4e-195 T Universal stress protein family
CPDACHDF_00843 2.1e-98 M NlpC/P60 family
CPDACHDF_00844 5.6e-173 usp 3.5.1.28 CBM50 S CHAP domain
CPDACHDF_00845 1.6e-210 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
CPDACHDF_00846 3.3e-121 phoU P Plays a role in the regulation of phosphate uptake
CPDACHDF_00847 5.5e-224 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
CPDACHDF_00848 6.7e-22
CPDACHDF_00849 6e-282 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G Phosphomannose isomerase type I
CPDACHDF_00850 1.2e-123 1.6.5.5 C Zinc-binding dehydrogenase
CPDACHDF_00851 5.6e-64 3.5.1.10 C Zinc-binding dehydrogenase
CPDACHDF_00852 0.0 4.2.1.53 S MCRA family
CPDACHDF_00853 3.4e-140 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CPDACHDF_00854 9.9e-77 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
CPDACHDF_00855 1.7e-274 puuP_1 E Amino acid permease
CPDACHDF_00856 9.2e-302 E Serine carboxypeptidase
CPDACHDF_00857 0.0 gadC E Amino acid permease
CPDACHDF_00858 1.9e-266 pepC 3.4.22.40 E Peptidase C1-like family
CPDACHDF_00859 1.4e-291 E Phospholipase B
CPDACHDF_00860 2.2e-103
CPDACHDF_00861 0.0 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
CPDACHDF_00863 1.6e-28 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
CPDACHDF_00864 2.4e-130 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
CPDACHDF_00865 9.5e-225 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
CPDACHDF_00866 7.2e-102
CPDACHDF_00867 0.0 pspC KT PspC domain
CPDACHDF_00868 2e-269 tcsS3 KT PspC domain
CPDACHDF_00869 6e-126 degU K helix_turn_helix, Lux Regulon
CPDACHDF_00870 0.0 S Domain of unknown function (DUF4037)
CPDACHDF_00871 9.6e-112 S Protein of unknown function (DUF4125)
CPDACHDF_00872 2.2e-290 S alpha beta
CPDACHDF_00873 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
CPDACHDF_00874 4.4e-219 I Diacylglycerol kinase catalytic domain
CPDACHDF_00875 1.9e-242 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CPDACHDF_00877 3.5e-180 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CPDACHDF_00878 1.8e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CPDACHDF_00880 1.9e-92
CPDACHDF_00881 1.5e-275 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CPDACHDF_00882 7.8e-233 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
CPDACHDF_00883 5.9e-194 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CPDACHDF_00884 6.4e-74 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CPDACHDF_00885 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CPDACHDF_00886 3.2e-195 nusA K Participates in both transcription termination and antitermination
CPDACHDF_00887 5.1e-162
CPDACHDF_00889 2.1e-148 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
CPDACHDF_00890 1e-70 rplQ J Ribosomal protein L17
CPDACHDF_00891 5.2e-184 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CPDACHDF_00892 5.7e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CPDACHDF_00893 2.1e-61 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CPDACHDF_00894 6.5e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
CPDACHDF_00895 1.2e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CPDACHDF_00896 3.2e-101 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
CPDACHDF_00897 1.5e-250 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
CPDACHDF_00898 7.4e-77 rplO J binds to the 23S rRNA
CPDACHDF_00899 2.5e-23 rpmD J Ribosomal protein L30p/L7e
CPDACHDF_00900 8.2e-94 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CPDACHDF_00901 1.3e-58 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CPDACHDF_00902 2.4e-95 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CPDACHDF_00903 1.9e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CPDACHDF_00904 3.1e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CPDACHDF_00905 1.7e-105 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CPDACHDF_00906 3e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CPDACHDF_00907 8.7e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CPDACHDF_00908 8.3e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CPDACHDF_00909 7e-37 rpmC J Belongs to the universal ribosomal protein uL29 family
CPDACHDF_00910 2e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CPDACHDF_00911 3.9e-124 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CPDACHDF_00912 6.7e-57 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CPDACHDF_00913 1.3e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CPDACHDF_00914 1.2e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CPDACHDF_00915 2.6e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
CPDACHDF_00916 6.8e-116 rplD J Forms part of the polypeptide exit tunnel
CPDACHDF_00917 3.2e-118 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CPDACHDF_00918 8e-51 rpsJ J Involved in the binding of tRNA to the ribosomes
CPDACHDF_00919 1.1e-152 ywiC S YwiC-like protein
CPDACHDF_00920 1.6e-190 K Psort location Cytoplasmic, score
CPDACHDF_00921 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
CPDACHDF_00922 6.7e-209 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
CPDACHDF_00923 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
CPDACHDF_00924 8.5e-63 rpsI J Belongs to the universal ribosomal protein uS9 family
CPDACHDF_00925 1.2e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CPDACHDF_00926 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
CPDACHDF_00927 3.9e-122
CPDACHDF_00928 2.8e-114 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
CPDACHDF_00929 1.3e-190 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CPDACHDF_00931 2e-252 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CPDACHDF_00932 6.8e-220 dapC E Aminotransferase class I and II
CPDACHDF_00933 7.6e-60 fdxA C 4Fe-4S binding domain
CPDACHDF_00934 6.6e-290 E aromatic amino acid transport protein AroP K03293
CPDACHDF_00935 1.7e-232 murB 1.3.1.98 M Cell wall formation
CPDACHDF_00936 1.9e-25 rpmG J Ribosomal protein L33
CPDACHDF_00940 2.3e-47 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CPDACHDF_00941 2.5e-196
CPDACHDF_00942 3.3e-121 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
CPDACHDF_00943 4e-141 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
CPDACHDF_00944 6.8e-32 fmdB S Putative regulatory protein
CPDACHDF_00945 7.9e-103 flgA NO SAF
CPDACHDF_00946 5.6e-39
CPDACHDF_00947 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
CPDACHDF_00948 9.2e-263 T Forkhead associated domain
CPDACHDF_00949 2.4e-44 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
CPDACHDF_00950 2.1e-88 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CPDACHDF_00951 9.3e-164 P Zinc-uptake complex component A periplasmic
CPDACHDF_00952 1.3e-249 pbuO S Permease family
CPDACHDF_00953 8.9e-147 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CPDACHDF_00954 8.3e-174 pstA P Phosphate transport system permease
CPDACHDF_00955 8.5e-171 pstC P probably responsible for the translocation of the substrate across the membrane
CPDACHDF_00956 3.2e-206 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
CPDACHDF_00957 3.3e-132 KT Transcriptional regulatory protein, C terminal
CPDACHDF_00958 1.6e-219 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
CPDACHDF_00959 7.4e-121 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CPDACHDF_00960 2.2e-240 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CPDACHDF_00961 0.0 I Psort location CytoplasmicMembrane, score 9.99
CPDACHDF_00962 2.1e-218 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CPDACHDF_00963 2.4e-269 pepC 3.4.22.40 E Peptidase C1-like family
CPDACHDF_00964 8.1e-84 D nuclear chromosome segregation
CPDACHDF_00965 1e-133 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CPDACHDF_00966 2.6e-149 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
CPDACHDF_00967 1e-226 yfiH Q Multi-copper polyphenol oxidoreductase laccase
CPDACHDF_00968 1.8e-300 yegQ O Peptidase family U32 C-terminal domain
CPDACHDF_00969 1.6e-168 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
CPDACHDF_00970 2e-42 nrdI F Probably involved in ribonucleotide reductase function
CPDACHDF_00971 9.6e-79 nrdI F Probably involved in ribonucleotide reductase function
CPDACHDF_00972 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CPDACHDF_00973 4.1e-186 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CPDACHDF_00974 0.0 S Predicted membrane protein (DUF2207)
CPDACHDF_00975 2.3e-99 lemA S LemA family
CPDACHDF_00976 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
CPDACHDF_00977 2e-49 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CPDACHDF_00978 3.8e-187 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
CPDACHDF_00979 2.6e-121
CPDACHDF_00981 5.9e-79 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
CPDACHDF_00982 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
CPDACHDF_00983 3.1e-303 pccB I Carboxyl transferase domain
CPDACHDF_00984 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
CPDACHDF_00985 2.6e-104 bioY S BioY family
CPDACHDF_00986 5.6e-169 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
CPDACHDF_00987 8.4e-145 QT PucR C-terminal helix-turn-helix domain
CPDACHDF_00988 6e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
CPDACHDF_00989 1.5e-71 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CPDACHDF_00990 8.4e-134 nusG K Participates in transcription elongation, termination and antitermination
CPDACHDF_00991 8.7e-34 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
CPDACHDF_00993 3.7e-232 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
CPDACHDF_00994 7.9e-205 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
CPDACHDF_00995 4.3e-303
CPDACHDF_00996 1.5e-39 rpmA J Ribosomal L27 protein
CPDACHDF_00997 5.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
CPDACHDF_00998 0.0 rne 3.1.26.12 J Ribonuclease E/G family
CPDACHDF_00999 1.1e-236 dapE 3.5.1.18 E Peptidase dimerisation domain
CPDACHDF_01000 1.9e-172 dapE 3.5.1.18 E Peptidase dimerisation domain
CPDACHDF_01001 2.8e-255 V Efflux ABC transporter, permease protein
CPDACHDF_01002 9.7e-159 V ATPases associated with a variety of cellular activities
CPDACHDF_01003 2.4e-144 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CPDACHDF_01004 2.7e-137 lepB 3.4.21.89 U Belongs to the peptidase S26 family
CPDACHDF_01005 1e-60 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
CPDACHDF_01006 0.0 pgi 5.3.1.9 G Belongs to the GPI family
CPDACHDF_01007 1.8e-218 manC 2.7.7.13, 5.3.1.8 M Mannose-6-phosphate isomerase
CPDACHDF_01010 4e-184 S Auxin Efflux Carrier
CPDACHDF_01011 1e-245 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
CPDACHDF_01012 8.2e-131 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CPDACHDF_01013 1.5e-135 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
CPDACHDF_01014 2.4e-46
CPDACHDF_01015 8.5e-251 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CPDACHDF_01016 6e-196 yghZ C Aldo/keto reductase family
CPDACHDF_01017 1.4e-49 S Protein of unknown function (DUF3039)
CPDACHDF_01018 1.3e-87 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CPDACHDF_01019 5.8e-121
CPDACHDF_01020 1.9e-112 yceD S Uncharacterized ACR, COG1399
CPDACHDF_01021 1.4e-24 rpmF J Belongs to the bacterial ribosomal protein bL32 family
CPDACHDF_01022 9.5e-141 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
CPDACHDF_01023 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
CPDACHDF_01024 3.4e-92 ilvN 2.2.1.6 E ACT domain
CPDACHDF_01025 3e-136 guaA1 6.3.5.2 F Peptidase C26
CPDACHDF_01026 4.7e-100 yjjK S ABC transporter
CPDACHDF_01027 8.7e-137 yjjK S ABC transporter
CPDACHDF_01028 0.0 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
CPDACHDF_01029 1.5e-265 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CPDACHDF_01030 1.5e-161 P Cation efflux family
CPDACHDF_01031 9.6e-222 S Endonuclease/Exonuclease/phosphatase family
CPDACHDF_01032 0.0 lacZ 3.2.1.23 G Psort location Cytoplasmic, score 8.87
CPDACHDF_01033 7.9e-66 rpsP J Belongs to the bacterial ribosomal protein bS16 family
CPDACHDF_01034 1.5e-46 CP_0960 S Belongs to the UPF0109 family
CPDACHDF_01035 2.7e-120 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CPDACHDF_01036 4.8e-159 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
CPDACHDF_01037 8.4e-102 rsmD 2.1.1.171 L Conserved hypothetical protein 95
CPDACHDF_01038 0.0 M Spy0128-like isopeptide containing domain
CPDACHDF_01039 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
CPDACHDF_01040 2.9e-30 rpmB J Ribosomal L28 family
CPDACHDF_01041 1.8e-198 yegV G pfkB family carbohydrate kinase
CPDACHDF_01042 5.6e-308 S Psort location Cytoplasmic, score 8.87
CPDACHDF_01043 0.0 S Psort location Cytoplasmic, score 8.87
CPDACHDF_01044 2.9e-229 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
CPDACHDF_01045 3.4e-163 S Putative ABC-transporter type IV
CPDACHDF_01046 3.9e-234 MA20_36090 S Psort location Cytoplasmic, score 8.87
CPDACHDF_01047 1.9e-115 K Bacterial regulatory proteins, tetR family
CPDACHDF_01048 4.4e-144 M Mechanosensitive ion channel
CPDACHDF_01049 7.4e-179 S CAAX protease self-immunity
CPDACHDF_01050 5.5e-113 S Domain of unknown function (DUF4854)
CPDACHDF_01052 2.8e-218 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
CPDACHDF_01053 1.4e-160 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
CPDACHDF_01054 1.2e-159 plsC2 2.3.1.51 I Phosphate acyltransferases
CPDACHDF_01055 1.1e-250 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CPDACHDF_01056 1.6e-257 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
CPDACHDF_01057 1.4e-41 QU41_18010 2.4.2.18 K Lrp/AsnC ligand binding domain
CPDACHDF_01058 2.3e-127 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
CPDACHDF_01059 4.5e-266
CPDACHDF_01060 5.6e-144 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
CPDACHDF_01061 3.7e-251 S Calcineurin-like phosphoesterase
CPDACHDF_01064 1.4e-294 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CPDACHDF_01065 6.2e-254 tnpA L Transposase
CPDACHDF_01066 6.8e-262 EGP Major facilitator Superfamily
CPDACHDF_01067 2.6e-123 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
CPDACHDF_01068 7.1e-175
CPDACHDF_01069 7.6e-100 S GtrA-like protein
CPDACHDF_01070 2.2e-198 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
CPDACHDF_01071 6e-63 S Macrophage migration inhibitory factor (MIF)
CPDACHDF_01072 4.1e-289 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
CPDACHDF_01073 1.9e-222 S Domain of unknown function (DUF4143)
CPDACHDF_01074 0.0 pepD E Peptidase family C69
CPDACHDF_01075 0.0 pepD E Peptidase family C69
CPDACHDF_01076 8.6e-141 S Phosphatidylethanolamine-binding protein
CPDACHDF_01077 5e-211 holB 2.7.7.7 L DNA polymerase III
CPDACHDF_01078 2e-109 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CPDACHDF_01079 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CPDACHDF_01080 3.2e-220 3.6.1.27 I PAP2 superfamily
CPDACHDF_01081 4.1e-10 ino1 5.5.1.4 I Myo-inositol-1-phosphate synthase
CPDACHDF_01082 5.9e-216 ino1 5.5.1.4 I Myo-inositol-1-phosphate synthase
CPDACHDF_01083 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
CPDACHDF_01084 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
CPDACHDF_01085 5.4e-121
CPDACHDF_01086 1e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CPDACHDF_01087 2.1e-97 askB 1.1.1.3, 2.7.2.4 E ACT domain
CPDACHDF_01088 6.9e-136 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
CPDACHDF_01089 6.7e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CPDACHDF_01090 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
CPDACHDF_01091 2.5e-75 S TIGRFAM helicase secretion neighborhood TadE-like protein
CPDACHDF_01092 6.5e-50 U TadE-like protein
CPDACHDF_01093 1.7e-39 S Protein of unknown function (DUF4244)
CPDACHDF_01094 3.7e-111 U Type II secretion system (T2SS), protein F
CPDACHDF_01095 2.9e-107 U Type ii secretion system
CPDACHDF_01096 1.3e-229 cpaF U Type II IV secretion system protein
CPDACHDF_01097 1.2e-77 cpaE D bacterial-type flagellum organization
CPDACHDF_01098 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CPDACHDF_01099 7.3e-205 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
CPDACHDF_01100 2e-129
CPDACHDF_01101 1e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CPDACHDF_01102 1.1e-200 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
CPDACHDF_01103 0.0 ubiB S ABC1 family
CPDACHDF_01104 1.7e-52 S granule-associated protein
CPDACHDF_01105 9.7e-143 cobQ S CobB/CobQ-like glutamine amidotransferase domain
CPDACHDF_01106 1.8e-284 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
CPDACHDF_01107 9.8e-258 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
CPDACHDF_01108 2.4e-38 K sequence-specific DNA binding
CPDACHDF_01109 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
CPDACHDF_01110 4.5e-55 glnB K Nitrogen regulatory protein P-II
CPDACHDF_01111 9e-237 amt U Ammonium Transporter Family
CPDACHDF_01112 1.5e-224 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
CPDACHDF_01113 3.3e-121 icaR K Bacterial regulatory proteins, tetR family
CPDACHDF_01114 2e-310 pepD E Peptidase family C69
CPDACHDF_01116 1.2e-94
CPDACHDF_01117 5e-142 S esterase of the alpha-beta hydrolase superfamily
CPDACHDF_01118 4.3e-166 S esterase of the alpha-beta hydrolase superfamily
CPDACHDF_01119 7.7e-182 adcA P ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
CPDACHDF_01120 6.2e-282 G ATPases associated with a variety of cellular activities
CPDACHDF_01121 3.4e-132 XK26_04485 P Cobalt transport protein
CPDACHDF_01122 2.5e-107 XK27_08585 S Hypothetical bacterial integral membrane protein (Trep_Strep)
CPDACHDF_01123 0.0 pip S YhgE Pip domain protein
CPDACHDF_01124 0.0 pip S YhgE Pip domain protein
CPDACHDF_01125 9.5e-102 K Psort location Cytoplasmic, score 8.87
CPDACHDF_01126 3.7e-219 natB E Receptor family ligand binding region
CPDACHDF_01127 2.7e-73
CPDACHDF_01128 1.6e-114 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
CPDACHDF_01129 6e-123 3.6.1.27 I Acid phosphatase homologues
CPDACHDF_01130 4e-268 xynD 3.2.1.8, 3.5.1.104, 3.5.1.41 G Polysaccharide deacetylase
CPDACHDF_01131 0.0 lmrA2 V ABC transporter transmembrane region
CPDACHDF_01132 0.0 lmrA1 V ABC transporter, ATP-binding protein
CPDACHDF_01133 1.2e-106 ydgJ K helix_turn_helix multiple antibiotic resistance protein
CPDACHDF_01134 9.3e-74 V ABC transporter, ATP-binding protein
CPDACHDF_01135 4.6e-305 M MacB-like periplasmic core domain
CPDACHDF_01136 2.8e-19 MV MacB-like periplasmic core domain
CPDACHDF_01137 4.6e-33 V efflux transmembrane transporter activity
CPDACHDF_01138 6.4e-282 cycA E Amino acid permease
CPDACHDF_01139 0.0 V FtsX-like permease family
CPDACHDF_01140 1.1e-127 V ABC transporter
CPDACHDF_01142 6e-277 aroP E aromatic amino acid transport protein AroP K03293
CPDACHDF_01143 1.9e-145 ybbM V Uncharacterised protein family (UPF0014)
CPDACHDF_01144 3.1e-133 ybbL V ATPases associated with a variety of cellular activities
CPDACHDF_01145 3.3e-260 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
CPDACHDF_01146 3e-25
CPDACHDF_01147 8.9e-133
CPDACHDF_01148 2.6e-115 S Protein of unknown function, DUF624
CPDACHDF_01149 5.2e-187 K helix_turn _helix lactose operon repressor
CPDACHDF_01150 1e-136 G beta-mannosidase
CPDACHDF_01151 8e-284 bglA 3.2.1.21 G Glycosyl hydrolase family 1
CPDACHDF_01152 6.5e-220 E GDSL-like Lipase/Acylhydrolase family
CPDACHDF_01153 0.0 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
CPDACHDF_01155 1.1e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
CPDACHDF_01156 3.8e-257 yhjE EGP Sugar (and other) transporter
CPDACHDF_01157 3.9e-15
CPDACHDF_01158 2.7e-48 S Protein of unknown function (DUF1778)
CPDACHDF_01159 4.8e-93 S Acetyltransferase (GNAT) family
CPDACHDF_01160 2.3e-279 scrT G Transporter major facilitator family protein
CPDACHDF_01161 1.9e-183 4.2.1.48 S Domain of unknown function (DUF4392)
CPDACHDF_01162 8.4e-243 bccA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Biotin carboxylase C-terminal domain
CPDACHDF_01163 7.6e-108 natB E Receptor family ligand binding region
CPDACHDF_01164 2.4e-295 G Transporter major facilitator family protein
CPDACHDF_01165 7.4e-299 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
CPDACHDF_01166 4.8e-193 K helix_turn _helix lactose operon repressor
CPDACHDF_01167 1.1e-215 natB E Receptor family ligand binding region
CPDACHDF_01168 1.6e-151 livF E ATPases associated with a variety of cellular activities
CPDACHDF_01169 5.3e-160 natA E Branched-chain amino acid ATP-binding cassette transporter
CPDACHDF_01170 9.7e-159 livM U Belongs to the binding-protein-dependent transport system permease family
CPDACHDF_01171 3e-233 U Belongs to the binding-protein-dependent transport system permease family
CPDACHDF_01172 6.5e-63 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CPDACHDF_01173 1.2e-174 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CPDACHDF_01174 2.2e-251 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CPDACHDF_01175 3e-195 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
CPDACHDF_01176 3.7e-254 3.5.1.104 G Polysaccharide deacetylase
CPDACHDF_01177 2e-166 K LysR substrate binding domain
CPDACHDF_01178 7.4e-205 adh 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
CPDACHDF_01179 6.9e-147 GM NmrA-like family
CPDACHDF_01180 5.9e-85 fldA C Flavodoxin
CPDACHDF_01181 6.3e-40 K helix_turn_helix, mercury resistance
CPDACHDF_01182 9.3e-89 C Flavodoxin
CPDACHDF_01183 3.8e-251 P nitric oxide dioxygenase activity
CPDACHDF_01185 8.8e-195 C Aldo/keto reductase family
CPDACHDF_01186 8.3e-162 K Bacterial regulatory helix-turn-helix protein, lysR family
CPDACHDF_01187 8.2e-190 S Dienelactone hydrolase family
CPDACHDF_01188 1.3e-86 4.1.1.44 S Cupin domain
CPDACHDF_01189 1.1e-141 4.1.1.44 S Carboxymuconolactone decarboxylase family
CPDACHDF_01190 1.7e-270 2.7.11.1 S cellulose binding
CPDACHDF_01191 4.9e-87 ogt 2.1.1.63, 3.2.2.21 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CPDACHDF_01192 7.7e-52 relB L RelB antitoxin
CPDACHDF_01193 1.1e-11 S NADPH-dependent FMN reductase
CPDACHDF_01194 1.1e-228 araJ EGP Major facilitator Superfamily
CPDACHDF_01195 2.5e-123 E SOS response associated peptidase (SRAP)
CPDACHDF_01196 4.8e-213 lppW 3.5.2.6 V Beta-lactamase
CPDACHDF_01197 3.8e-179 htpX O Belongs to the peptidase M48B family
CPDACHDF_01199 4.6e-279 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
CPDACHDF_01200 8.8e-308 S Sel1-like repeats.
CPDACHDF_01201 1.1e-115 3.8.1.2 S Haloacid dehalogenase-like hydrolase
CPDACHDF_01202 1.9e-285 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
CPDACHDF_01203 0.0 cadA P E1-E2 ATPase
CPDACHDF_01204 1.6e-279 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
CPDACHDF_01206 2.4e-29 ymgJ S Transglycosylase associated protein
CPDACHDF_01207 3.1e-32 ytgB S Transglycosylase associated protein
CPDACHDF_01208 2.6e-180 rrmA 2.1.1.187 Q Methyltransferase domain
CPDACHDF_01209 5.7e-58
CPDACHDF_01210 3.1e-214 pldB 3.1.1.5 I Serine aminopeptidase, S33
CPDACHDF_01211 4.7e-127 yicL EG EamA-like transporter family
CPDACHDF_01212 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
CPDACHDF_01213 2.3e-130 fhaA T Protein of unknown function (DUF2662)
CPDACHDF_01214 8e-62 fhaB T Inner membrane component of T3SS, cytoplasmic domain
CPDACHDF_01215 1.6e-269 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
CPDACHDF_01216 1.1e-290 rodA D Belongs to the SEDS family
CPDACHDF_01217 2.2e-271 pbpA M penicillin-binding protein
CPDACHDF_01218 1.3e-193 T Protein tyrosine kinase
CPDACHDF_01219 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
CPDACHDF_01220 3.1e-121 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
CPDACHDF_01221 9.2e-225 srtA 3.4.22.70 M Sortase family
CPDACHDF_01222 3.3e-141 S Bacterial protein of unknown function (DUF881)
CPDACHDF_01223 7.2e-37 crgA D Involved in cell division
CPDACHDF_01224 4.5e-274 L ribosomal rna small subunit methyltransferase
CPDACHDF_01225 5.7e-129 gluP 3.4.21.105 S Rhomboid family
CPDACHDF_01226 5.4e-36
CPDACHDF_01227 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
CPDACHDF_01228 1.4e-80 I Sterol carrier protein
CPDACHDF_01229 1.2e-47 S Protein of unknown function (DUF3073)
CPDACHDF_01230 1.2e-205 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
CPDACHDF_01231 2.1e-254 tnpA L Transposase
CPDACHDF_01232 2.5e-298 yjjP S Threonine/Serine exporter, ThrE
CPDACHDF_01233 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CPDACHDF_01234 9.1e-169 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
CPDACHDF_01235 1.9e-299 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
CPDACHDF_01236 5.1e-130 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
CPDACHDF_01237 7.4e-305 araB 2.7.1.16, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
CPDACHDF_01238 8.5e-311 3.2.1.55 GH51 G arabinose metabolic process
CPDACHDF_01239 1.5e-194 K helix_turn _helix lactose operon repressor
CPDACHDF_01240 1.5e-53
CPDACHDF_01241 2.4e-159 xylG 3.6.3.17 G ATPases associated with a variety of cellular activities
CPDACHDF_01242 2e-35
CPDACHDF_01243 2.4e-214 K helix_turn _helix lactose operon repressor
CPDACHDF_01244 2.2e-128 cah 4.2.1.1 P Reversible hydration of carbon dioxide
CPDACHDF_01245 9.1e-248 ytfL P Transporter associated domain
CPDACHDF_01246 1e-84 dps P Belongs to the Dps family
CPDACHDF_01247 2.8e-122 K Bacterial regulatory proteins, tetR family
CPDACHDF_01248 3.1e-218 blt G MFS/sugar transport protein
CPDACHDF_01249 0.0 lacZ3 3.2.1.23 G Beta-galactosidase trimerisation domain
CPDACHDF_01250 1e-303 3.2.1.45 GH30 G Glycosyl hydrolase family 30 TIM-barrel domain
CPDACHDF_01251 2.8e-254 tnpA L Transposase
CPDACHDF_01252 1.3e-87 S Domain of unknown function (DUF4234)
CPDACHDF_01253 5.8e-21 neo 2.7.1.87, 2.7.1.95 F Phosphotransferase enzyme family
CPDACHDF_01254 3.6e-84 neo 2.7.1.87, 2.7.1.95 F Phosphotransferase enzyme family
CPDACHDF_01255 0.0 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
CPDACHDF_01256 1.4e-121 akr5f 1.1.1.346 S Aldo/keto reductase family
CPDACHDF_01257 1.4e-24 akr5f 1.1.1.346 S reductase
CPDACHDF_01258 3.7e-165 K Bacterial regulatory helix-turn-helix protein, lysR family
CPDACHDF_01259 4.5e-67 chpA T Toxic component of a toxin-antitoxin (TA) module
CPDACHDF_01260 2.6e-34 chpA T Toxic component of a toxin-antitoxin (TA) module
CPDACHDF_01261 3.4e-38 S Bacterial toxin of type II toxin-antitoxin system, YafQ
CPDACHDF_01262 2.8e-287
CPDACHDF_01263 0.0
CPDACHDF_01264 3.4e-111
CPDACHDF_01265 0.0
CPDACHDF_01266 2e-47 S Type II restriction endonuclease EcoO109I
CPDACHDF_01267 3.1e-194 sinIM 2.1.1.37 H C-5 cytosine-specific DNA methylase
CPDACHDF_01269 4.4e-26 L Uncharacterized conserved protein (DUF2075)
CPDACHDF_01270 4.7e-57 mazG S MazG-like family
CPDACHDF_01273 2.1e-22
CPDACHDF_01274 4.9e-105
CPDACHDF_01275 2e-106 XK27_04590 S NADPH-dependent FMN reductase
CPDACHDF_01276 7.7e-166
CPDACHDF_01277 1.1e-149 ybaJ Q ubiE/COQ5 methyltransferase family
CPDACHDF_01278 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CPDACHDF_01279 1.6e-154 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
CPDACHDF_01280 8.1e-78
CPDACHDF_01281 2.4e-144 S Protein of unknown function DUF45
CPDACHDF_01284 3.5e-51 gcs2 S A circularly permuted ATPgrasp
CPDACHDF_01285 4e-68 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
CPDACHDF_01286 8.8e-162 3.2.1.78 GH26 G Glycosyl hydrolase family 26
CPDACHDF_01287 2e-236 EGP Major facilitator Superfamily
CPDACHDF_01288 5.8e-263 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
CPDACHDF_01289 1.9e-161 yplQ S Haemolysin-III related
CPDACHDF_01290 1.8e-217 V VanZ like family
CPDACHDF_01291 6.2e-75 S Transmembrane domain of unknown function (DUF3566)
CPDACHDF_01292 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CPDACHDF_01293 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CPDACHDF_01294 5.8e-91 S Protein of unknown function (DUF721)
CPDACHDF_01295 9.2e-267 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CPDACHDF_01296 1.9e-206 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
CPDACHDF_01297 0.0 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CPDACHDF_01298 5.9e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
CPDACHDF_01299 5.6e-178 yidC U Membrane protein insertase, YidC Oxa1 family
CPDACHDF_01300 3.2e-95 jag S Putative single-stranded nucleic acids-binding domain
CPDACHDF_01301 8.8e-136 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
CPDACHDF_01302 8.7e-176 parA D CobQ CobB MinD ParA nucleotide binding domain protein
CPDACHDF_01303 1.9e-232 parB K Belongs to the ParB family
CPDACHDF_01304 1.3e-179 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
CPDACHDF_01305 0.0 murJ KLT MviN-like protein
CPDACHDF_01306 0.0
CPDACHDF_01307 3.5e-172 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
CPDACHDF_01308 1.4e-308 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
CPDACHDF_01309 1.5e-112 S LytR cell envelope-related transcriptional attenuator
CPDACHDF_01310 4.1e-178 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
CPDACHDF_01311 7e-164 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
CPDACHDF_01312 1.2e-219 S G5
CPDACHDF_01314 5.8e-85 O Thioredoxin
CPDACHDF_01315 0.0 KLT Protein tyrosine kinase
CPDACHDF_01316 5.5e-189 U Ion channel
CPDACHDF_01317 1.5e-211 ugpC E Belongs to the ABC transporter superfamily
CPDACHDF_01318 3.6e-279 KLT Domain of unknown function (DUF4032)
CPDACHDF_01319 2.6e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CPDACHDF_01320 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
CPDACHDF_01321 6.9e-112 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
CPDACHDF_01322 7.9e-163 D nuclear chromosome segregation
CPDACHDF_01323 3.6e-171 ypfH S Phospholipase/Carboxylesterase
CPDACHDF_01324 0.0 yjcE P Sodium/hydrogen exchanger family
CPDACHDF_01325 5.7e-85 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
CPDACHDF_01326 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
CPDACHDF_01327 3.6e-232 nagC GK ROK family
CPDACHDF_01328 9e-237 msmE7 G Bacterial extracellular solute-binding protein
CPDACHDF_01329 6.8e-184 G Binding-protein-dependent transport system inner membrane component
CPDACHDF_01330 1.5e-161 G Binding-protein-dependent transport system inner membrane component
CPDACHDF_01331 0.0 rafA 3.2.1.22 G Raffinose synthase or seed imbibition protein Sip1
CPDACHDF_01332 9.1e-186 K Psort location Cytoplasmic, score
CPDACHDF_01335 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
CPDACHDF_01336 2.8e-224 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
CPDACHDF_01337 1.2e-145 cobB2 K Sir2 family
CPDACHDF_01338 9.9e-202 K Periplasmic binding protein domain
CPDACHDF_01339 0.0 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
CPDACHDF_01340 1.4e-270 G Psort location CytoplasmicMembrane, score 10.00
CPDACHDF_01342 1.1e-17
CPDACHDF_01343 7.9e-40 I alpha/beta hydrolase fold
CPDACHDF_01345 4.7e-16 yjgB 1.1.1.1 S alcohol dehydrogenase
CPDACHDF_01346 3.3e-16 dcuD C C4-dicarboxylate anaerobic carrier
CPDACHDF_01348 1.1e-197 K helix_turn _helix lactose operon repressor
CPDACHDF_01349 5e-168 iunH2 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
CPDACHDF_01350 4.6e-269 EGP Major Facilitator Superfamily
CPDACHDF_01351 1.4e-173 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CPDACHDF_01352 5.3e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CPDACHDF_01353 5.9e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
CPDACHDF_01354 2.2e-87 ssb1 L Single-stranded DNA-binding protein
CPDACHDF_01355 1.2e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CPDACHDF_01356 2.2e-73 rplI J Binds to the 23S rRNA
CPDACHDF_01357 5.8e-125 T Pfam Adenylate and Guanylate cyclase catalytic domain
CPDACHDF_01361 7.6e-132 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
CPDACHDF_01362 2.4e-181 M Protein of unknown function (DUF3152)
CPDACHDF_01363 1.1e-197 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
CPDACHDF_01364 1.7e-151 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CPDACHDF_01365 4.6e-191 3.4.22.70 M Sortase family
CPDACHDF_01366 0.0 Q von Willebrand factor (vWF) type A domain
CPDACHDF_01367 3.1e-306 M domain protein
CPDACHDF_01368 7.3e-81
CPDACHDF_01369 1e-156 fahA Q Fumarylacetoacetate (FAA) hydrolase family
CPDACHDF_01370 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
CPDACHDF_01371 2.2e-260 ydbA 3.6.3.4, 3.6.3.54 P E1-E2 ATPase
CPDACHDF_01372 3.4e-115 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CPDACHDF_01373 1e-153 spoU 2.1.1.185 J RNA methyltransferase TrmH family
CPDACHDF_01374 8.4e-113 V ABC transporter
CPDACHDF_01375 4.2e-151 S ABC-type transport system involved in multi-copper enzyme maturation permease component
CPDACHDF_01376 4.5e-24 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CPDACHDF_01377 3.2e-289 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
CPDACHDF_01378 6e-285 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CPDACHDF_01379 5.1e-198 2.3.1.57 J Acetyltransferase (GNAT) domain
CPDACHDF_01380 7.4e-52 S Protein of unknown function (DUF2469)
CPDACHDF_01381 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
CPDACHDF_01382 2.8e-311 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CPDACHDF_01383 0.0 S domain protein
CPDACHDF_01384 1e-63 tyrA 5.4.99.5 E Chorismate mutase type II
CPDACHDF_01385 5.4e-104 K helix_turn_helix ASNC type
CPDACHDF_01386 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
CPDACHDF_01387 1.8e-303 E Bacterial extracellular solute-binding proteins, family 5 Middle
CPDACHDF_01388 7.7e-140 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CPDACHDF_01389 1.4e-150 KT Transcriptional regulatory protein, C terminal
CPDACHDF_01390 9e-153
CPDACHDF_01391 2.2e-93 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CPDACHDF_01392 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
CPDACHDF_01393 0.0 K RNA polymerase II activating transcription factor binding
CPDACHDF_01394 0.0 M domain protein
CPDACHDF_01395 1.2e-286 eriC P Voltage gated chloride channel
CPDACHDF_01396 0.0 oxc 4.1.1.8 EH Thiamine pyrophosphate enzyme, central domain
CPDACHDF_01397 5.8e-176 yfdV S Membrane transport protein
CPDACHDF_01398 1.1e-206 3.2.1.4, 3.2.1.78 GH26,GH5,GH9 G hydrolase family 5
CPDACHDF_01399 3.6e-265 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
CPDACHDF_01400 2.9e-229 L Phage integrase family
CPDACHDF_01401 1.4e-219 2.1.1.72 H Adenine-specific methyltransferase EcoRI
CPDACHDF_01402 4.4e-224 L HNH endonuclease
CPDACHDF_01403 1.4e-36
CPDACHDF_01404 6.5e-121 S Plasmid replication protein
CPDACHDF_01405 2.4e-141 D ftsk spoiiie
CPDACHDF_01406 5.1e-66
CPDACHDF_01407 2.9e-27
CPDACHDF_01408 3e-212
CPDACHDF_01410 2.4e-183 rihB 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
CPDACHDF_01411 7.1e-259 EGP Major facilitator Superfamily
CPDACHDF_01412 1.1e-205 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
CPDACHDF_01413 1e-145 atpB C it plays a direct role in the translocation of protons across the membrane
CPDACHDF_01414 1.4e-31 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CPDACHDF_01415 1e-61 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CPDACHDF_01416 8.8e-153 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CPDACHDF_01417 2.7e-310 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CPDACHDF_01418 7.7e-166 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CPDACHDF_01419 3.5e-285 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CPDACHDF_01420 2e-49 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
CPDACHDF_01421 9.1e-141 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
CPDACHDF_01422 1.4e-154 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
CPDACHDF_01423 1.1e-181
CPDACHDF_01424 9.9e-183
CPDACHDF_01425 2.6e-172 trxA2 O Tetratricopeptide repeat
CPDACHDF_01427 9.9e-185 cbpA 2.4.1.20 GT36 G Glycosyl hydrolase 36 superfamily, catalytic domain
CPDACHDF_01428 1e-108 P Binding-protein-dependent transport system inner membrane component
CPDACHDF_01429 2.1e-67 psp1 3.5.99.10 J Endoribonuclease L-PSP
CPDACHDF_01430 1.2e-290 3.2.1.45 GH30 G Glycosyl hydrolase family 30 TIM-barrel domain
CPDACHDF_01431 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
CPDACHDF_01432 3.7e-301 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
CPDACHDF_01433 6.9e-245 hom 1.1.1.3 E Homoserine dehydrogenase
CPDACHDF_01434 6.1e-185 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
CPDACHDF_01435 2.5e-23 cas3 L DEAD-like helicases superfamily
CPDACHDF_01436 6.2e-254 tnpA L Transposase
CPDACHDF_01437 3.2e-57
CPDACHDF_01438 7.2e-254 wcoI DM Psort location CytoplasmicMembrane, score
CPDACHDF_01439 0.0 pflA S Protein of unknown function (DUF4012)
CPDACHDF_01440 1.3e-102 3.1.3.48 T Low molecular weight phosphatase family
CPDACHDF_01441 7.1e-272 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
CPDACHDF_01442 0.0 fadD 6.2.1.3 I long-chain-fatty acid CoA ligase
CPDACHDF_01443 0.0 cydD V ABC transporter transmembrane region
CPDACHDF_01444 3e-204 S EpsG family
CPDACHDF_01445 2.6e-160 GT2 S Glycosyl transferase family 2
CPDACHDF_01446 3.6e-142 GT2 S Glycosyl transferase family 2
CPDACHDF_01447 8.9e-92 pssE M Glycosyltransferase family 28 C-terminal domain
CPDACHDF_01448 1.3e-84 pssD M Oligosaccharide biosynthesis protein Alg14 like
CPDACHDF_01449 2.5e-222 lspL 5.1.3.6 M epimerase dehydratase
CPDACHDF_01450 1e-119 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
CPDACHDF_01451 4e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
CPDACHDF_01452 1.1e-135 L Protein of unknown function (DUF1524)
CPDACHDF_01453 1.3e-241 mntH P H( )-stimulated, divalent metal cation uptake system
CPDACHDF_01454 0.0 EGP Major facilitator Superfamily
CPDACHDF_01455 1.5e-45
CPDACHDF_01456 2.4e-289 rfbP M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
CPDACHDF_01457 9.8e-163 GT2 S Glycosyl transferase family 2
CPDACHDF_01458 4.1e-197 M transferase activity, transferring glycosyl groups
CPDACHDF_01459 3.1e-254 S Psort location CytoplasmicMembrane, score 9.99
CPDACHDF_01460 4.2e-239 1.1.1.22 M UDP binding domain
CPDACHDF_01461 3.2e-183 MA20_43635 M Capsular polysaccharide synthesis protein
CPDACHDF_01462 3.7e-165 rfbN GT2 S Glycosyltransferase like family 2
CPDACHDF_01463 1.5e-146 M Domain of unknown function (DUF4422)
CPDACHDF_01464 5.3e-172 GT2 S Glycosyl transferase family 2
CPDACHDF_01465 4.9e-254
CPDACHDF_01466 5.3e-192 S Glycosyltransferase like family 2
CPDACHDF_01467 1.3e-170 S Glycosyl transferase family 2
CPDACHDF_01468 1.1e-267 S Psort location CytoplasmicMembrane, score 9.99
CPDACHDF_01469 3.9e-184 GT2 M Glycosyl transferase family 2
CPDACHDF_01470 4.9e-206 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
CPDACHDF_01471 3e-289 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
CPDACHDF_01472 5.3e-172 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CPDACHDF_01473 0.0 pflA S Protein of unknown function (DUF4012)
CPDACHDF_01474 2.7e-188 rfbJ M Glycosyl transferase family 2
CPDACHDF_01475 1.1e-272 S Predicted membrane protein (DUF2142)
CPDACHDF_01476 3.3e-77
CPDACHDF_01477 1.5e-286 rfbP M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
CPDACHDF_01478 2e-178 S G5
CPDACHDF_01479 4.6e-67 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
CPDACHDF_01480 4e-86 F Domain of unknown function (DUF4916)
CPDACHDF_01481 5e-173 mhpC I Alpha/beta hydrolase family
CPDACHDF_01482 1.3e-215 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
CPDACHDF_01483 8.4e-72 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
CPDACHDF_01484 4.1e-289 S Uncharacterized conserved protein (DUF2183)
CPDACHDF_01485 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
CPDACHDF_01486 4.2e-176
CPDACHDF_01487 4.2e-20
CPDACHDF_01488 1.1e-75 J TM2 domain
CPDACHDF_01489 3.3e-222 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
CPDACHDF_01490 1e-139 glxR K helix_turn_helix, cAMP Regulatory protein
CPDACHDF_01491 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
CPDACHDF_01492 3.2e-222 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
CPDACHDF_01493 7.5e-227 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
CPDACHDF_01494 5.7e-194 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
CPDACHDF_01495 1.3e-143 glpR K DeoR C terminal sensor domain
CPDACHDF_01496 9.1e-258 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
CPDACHDF_01497 1.5e-233 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
CPDACHDF_01499 7.9e-149 srtC 3.4.22.70 M Sortase family
CPDACHDF_01500 5.5e-43 gcvR T Belongs to the UPF0237 family
CPDACHDF_01501 1.4e-251 S UPF0210 protein
CPDACHDF_01502 1.2e-128 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
CPDACHDF_01503 4.2e-186 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
CPDACHDF_01504 3.5e-50
CPDACHDF_01505 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CPDACHDF_01506 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CPDACHDF_01507 9.6e-104 T Forkhead associated domain
CPDACHDF_01508 3.6e-93 B Belongs to the OprB family
CPDACHDF_01509 0.0 E Transglutaminase-like superfamily
CPDACHDF_01510 5.4e-188 S Protein of unknown function DUF58
CPDACHDF_01511 7e-130 S ATPase family associated with various cellular activities (AAA)
CPDACHDF_01512 0.0 S Fibronectin type 3 domain
CPDACHDF_01513 1.9e-269 KLT Protein tyrosine kinase
CPDACHDF_01514 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
CPDACHDF_01515 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
CPDACHDF_01516 3e-133 K -acetyltransferase
CPDACHDF_01517 3.5e-250 G Major Facilitator Superfamily
CPDACHDF_01518 1.7e-134 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
CPDACHDF_01519 5.7e-166 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CPDACHDF_01520 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CPDACHDF_01521 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
CPDACHDF_01522 7.2e-253 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CPDACHDF_01523 2.7e-125 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
CPDACHDF_01524 1.9e-269 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
CPDACHDF_01525 9e-300 S zinc finger
CPDACHDF_01526 5.6e-100 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
CPDACHDF_01527 1.5e-172 aspB E Aminotransferase class-V
CPDACHDF_01528 1.9e-127 tmp1 S Domain of unknown function (DUF4391)
CPDACHDF_01530 5.9e-191 S Endonuclease/Exonuclease/phosphatase family
CPDACHDF_01531 6.8e-45 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CPDACHDF_01532 2.7e-233 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CPDACHDF_01533 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
CPDACHDF_01534 2e-148 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CPDACHDF_01535 5.4e-121
CPDACHDF_01536 3.5e-62 yiiE S Protein of unknown function (DUF1304)
CPDACHDF_01537 9.4e-101 yiiE S Protein of unknown function (DUF1211)
CPDACHDF_01538 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
CPDACHDF_01539 6.5e-256 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
CPDACHDF_01540 0.0 cas4 3.1.12.1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
CPDACHDF_01541 9.4e-17 cas2 L CRISPR associated protein Cas2
CPDACHDF_01542 1.2e-222 S CRISPR-associated protein GSU0053 (Cas_GSU0053)
CPDACHDF_01543 0.0
CPDACHDF_01544 0.0 cas3 L CRISPR-associated helicase Cas3
CPDACHDF_01545 2.1e-204
CPDACHDF_01546 5.8e-49
CPDACHDF_01549 1.7e-98 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
CPDACHDF_01550 3.7e-102 S NADPH-dependent FMN reductase
CPDACHDF_01551 3.2e-98 K MarR family
CPDACHDF_01552 0.0 V ABC transporter, ATP-binding protein
CPDACHDF_01553 0.0 V ABC transporter transmembrane region
CPDACHDF_01554 5.6e-11
CPDACHDF_01555 4.3e-46
CPDACHDF_01556 2e-146 ptp3 3.1.3.48 T Tyrosine phosphatase family
CPDACHDF_01557 2.3e-23
CPDACHDF_01558 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CPDACHDF_01559 8e-08 L Transposase and inactivated derivatives IS30 family
CPDACHDF_01560 4.4e-207 S COG1512 Beta-propeller domains of methanol dehydrogenase type
CPDACHDF_01561 1.6e-107 pspA KT PspA/IM30 family
CPDACHDF_01562 8.5e-260 EGP Major Facilitator Superfamily
CPDACHDF_01563 0.0 E ABC transporter, substrate-binding protein, family 5
CPDACHDF_01564 1.2e-27
CPDACHDF_01565 6e-117
CPDACHDF_01566 1.9e-286 aaxC E Amino acid permease
CPDACHDF_01567 0.0 tetP J Elongation factor G, domain IV
CPDACHDF_01571 8.9e-99 iolT EGP Major facilitator Superfamily
CPDACHDF_01572 7.8e-44
CPDACHDF_01573 9.5e-141 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
CPDACHDF_01574 4e-69 S Protein of unknown function (DUF4235)
CPDACHDF_01575 1.9e-115 G Phosphoglycerate mutase family
CPDACHDF_01576 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
CPDACHDF_01577 6.2e-241 amyE G Bacterial extracellular solute-binding protein
CPDACHDF_01578 2.7e-09 amyE G Bacterial extracellular solute-binding protein
CPDACHDF_01579 1.1e-181 K Psort location Cytoplasmic, score
CPDACHDF_01580 8.8e-156 msmF G Binding-protein-dependent transport system inner membrane component
CPDACHDF_01581 6.1e-154 rafG G ABC transporter permease
CPDACHDF_01582 2.4e-101 S Protein of unknown function, DUF624
CPDACHDF_01583 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
CPDACHDF_01584 0.0 malL 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
CPDACHDF_01585 8.7e-237 malE G Bacterial extracellular solute-binding protein
CPDACHDF_01586 2.5e-269 malF G Binding-protein-dependent transport system inner membrane component
CPDACHDF_01587 7.3e-175 malG G Binding-protein-dependent transport system inner membrane component
CPDACHDF_01588 0.0 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
CPDACHDF_01589 3.1e-147 S HAD-hyrolase-like
CPDACHDF_01590 1.8e-144 traX S TraX protein
CPDACHDF_01591 1.3e-193 K Psort location Cytoplasmic, score
CPDACHDF_01593 0.0 dnaK O Heat shock 70 kDa protein
CPDACHDF_01594 1.2e-94 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CPDACHDF_01595 2.1e-167 dnaJ1 O DnaJ molecular chaperone homology domain
CPDACHDF_01596 5.4e-92 hspR K transcriptional regulator, MerR family
CPDACHDF_01597 5.6e-129 S HAD hydrolase, family IA, variant 3
CPDACHDF_01598 6.2e-114 K Bacterial regulatory proteins, tetR family
CPDACHDF_01599 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
CPDACHDF_01600 2.7e-145 S GyrI-like small molecule binding domain
CPDACHDF_01602 4e-136 dedA S SNARE associated Golgi protein
CPDACHDF_01603 6.2e-159 I alpha/beta hydrolase fold
CPDACHDF_01604 0.0 pmt 2.4.1.109 GT39 O C-terminal four TMM region of protein-O-mannosyltransferase
CPDACHDF_01605 1.1e-172 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CPDACHDF_01606 6.6e-54
CPDACHDF_01607 1.3e-130
CPDACHDF_01608 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CPDACHDF_01609 0.0 mdlA2 V ABC transporter
CPDACHDF_01610 0.0 yknV V ABC transporter
CPDACHDF_01611 3.6e-118
CPDACHDF_01612 0.0 rafA 3.2.1.22 G Psort location Cytoplasmic, score 8.87
CPDACHDF_01613 1.7e-184 tatD L TatD related DNase
CPDACHDF_01614 0.0 kup P Transport of potassium into the cell
CPDACHDF_01615 3.3e-169 S Glutamine amidotransferase domain
CPDACHDF_01616 3.2e-152 3.6.1.11, 3.6.1.40 T HD domain
CPDACHDF_01617 1.6e-194 V ABC transporter
CPDACHDF_01618 9.6e-250 V ABC transporter permease
CPDACHDF_01619 0.0 S Psort location Cytoplasmic, score 8.87
CPDACHDF_01620 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CPDACHDF_01621 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
CPDACHDF_01623 0.0 2.4.1.288 GT2 S Glycosyltransferase like family 2
CPDACHDF_01624 1.1e-150 rgpC U Transport permease protein
CPDACHDF_01625 1.6e-271 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
CPDACHDF_01626 4.7e-265 S Polysaccharide pyruvyl transferase
CPDACHDF_01627 5.9e-134
CPDACHDF_01628 1.1e-100 M hydrolase, family 25
CPDACHDF_01629 1.4e-56 S Leucine-rich repeat (LRR) protein
CPDACHDF_01630 7.9e-187 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
CPDACHDF_01631 0.0 lytC 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
CPDACHDF_01632 5.4e-177 lytC 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
CPDACHDF_01633 0.0 glfT 2.4.1.288 GT2 S Glycosyltransferase like family 2
CPDACHDF_01634 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
CPDACHDF_01635 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
CPDACHDF_01636 2.9e-198 TTHA0885 S Glycosyltransferase, group 2 family protein
CPDACHDF_01638 1.9e-208 2.4.1.303 GT2 M Glycosyl transferase family 2
CPDACHDF_01639 6.3e-237 glf 5.4.99.9 M UDP-galactopyranose mutase
CPDACHDF_01641 1.5e-47
CPDACHDF_01642 1.3e-28 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
CPDACHDF_01643 7.3e-100 nadE 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CPDACHDF_01644 2.5e-258 nadE 3.5.1.53, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CPDACHDF_01645 3e-41 relB L RelB antitoxin
CPDACHDF_01648 1.4e-124 amyE G Bacterial extracellular solute-binding protein
CPDACHDF_01649 1.3e-29 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
CPDACHDF_01650 1.5e-18 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CPDACHDF_01651 3.2e-23 dppB EP Binding-protein-dependent transport system inner membrane component
CPDACHDF_01652 2.7e-20 G Periplasmic binding protein domain
CPDACHDF_01653 2.7e-55 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
CPDACHDF_01654 3.8e-117 amyE G Bacterial extracellular solute-binding protein
CPDACHDF_01655 1.8e-34 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
CPDACHDF_01656 1.1e-39 S ABC transporter
CPDACHDF_01657 1.5e-44 Z012_01000 1.1.1.14, 1.1.1.9 C Zinc-binding dehydrogenase
CPDACHDF_01658 1.3e-38 G Binding-protein-dependent transport system inner membrane component
CPDACHDF_01659 6.6e-19 pepO 3.4.24.71 O Peptidase family M13

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)