ORF_ID e_value Gene_name EC_number CAZy COGs Description
PCMLNIIM_00001 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
PCMLNIIM_00002 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
PCMLNIIM_00003 8e-180 XK27_08075 M glycosyl transferase family 2
PCMLNIIM_00004 5.5e-85 S Carbohydrate-binding domain-containing protein Cthe_2159
PCMLNIIM_00005 4.6e-143 P molecular chaperone
PCMLNIIM_00006 1.4e-92 XK27_05505 S Psort location CytoplasmicMembrane, score
PCMLNIIM_00009 4.1e-50 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
PCMLNIIM_00010 8e-60 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PCMLNIIM_00011 2.8e-137 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PCMLNIIM_00012 3.1e-130 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PCMLNIIM_00013 2.3e-110 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PCMLNIIM_00014 1.1e-106 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
PCMLNIIM_00015 1.6e-233 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PCMLNIIM_00016 5.5e-118 hisG 2.4.2.17 E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PCMLNIIM_00017 6.5e-179 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PCMLNIIM_00018 1.9e-192 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PCMLNIIM_00019 4.1e-60 XK27_08085
PCMLNIIM_00020 1.4e-146 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
PCMLNIIM_00021 3.9e-33
PCMLNIIM_00022 6.3e-219 V MatE
PCMLNIIM_00023 9.3e-138 hisK 3.1.3.15 E Histidinol phosphatase and related hydrolases of the PHP family
PCMLNIIM_00024 6.5e-119 ylfI S tigr01906
PCMLNIIM_00025 4e-139 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PCMLNIIM_00026 5.3e-141 fat 3.1.2.21 I Acyl-ACP thioesterase
PCMLNIIM_00027 7.7e-216 hemN H Involved in the biosynthesis of porphyrin-containing compound
PCMLNIIM_00028 2.2e-30 KT response to antibiotic
PCMLNIIM_00030 1.3e-204 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PCMLNIIM_00031 2.7e-111 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PCMLNIIM_00032 2.4e-161 rfbA 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PCMLNIIM_00033 4.3e-258 S phospholipase Carboxylesterase
PCMLNIIM_00034 8.2e-199 yurR 1.4.5.1 E oxidoreductase
PCMLNIIM_00035 4e-145 zupT P Mediates zinc uptake. May also transport other divalent cations
PCMLNIIM_00036 7.1e-144 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PCMLNIIM_00037 1.7e-117 trmK 2.1.1.217 S SAM-dependent methyltransferase
PCMLNIIM_00038 1.3e-64 gtrA S GtrA-like protein
PCMLNIIM_00039 9.7e-250 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PCMLNIIM_00040 2.5e-167 ybbR S Protein conserved in bacteria
PCMLNIIM_00041 2e-147 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PCMLNIIM_00042 2.6e-255 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain protein
PCMLNIIM_00043 2.3e-150 cobQ S glutamine amidotransferase
PCMLNIIM_00044 0.0 mprF 2.3.2.3 J Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PCMLNIIM_00045 2e-132 pip 1.11.1.10 S Alpha beta hydrolase
PCMLNIIM_00046 1.6e-39 MA20_06245 S yiaA/B two helix domain
PCMLNIIM_00047 0.0 uup S abc transporter atp-binding protein
PCMLNIIM_00048 3.1e-113 udk 2.7.1.48 F Cytidine monophosphokinase
PCMLNIIM_00049 5.5e-179 yfmL 3.6.4.13 L DEAD DEAH box helicase
PCMLNIIM_00050 9.9e-227 XK27_05680 6.3.2.2, 6.3.2.4 M carbamoylphosphate synthase large subunit
PCMLNIIM_00051 2.7e-153 XK27_05675 S Esterase
PCMLNIIM_00052 6.1e-162 XK27_05670 S Putative esterase
PCMLNIIM_00053 1.1e-264 gapN 1.2.1.9 C Belongs to the aldehyde dehydrogenase family
PCMLNIIM_00054 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PCMLNIIM_00055 3e-38 ptsH G phosphocarrier protein Hpr
PCMLNIIM_00056 3.9e-223 icd 1.1.1.42 C Isocitrate dehydrogenase
PCMLNIIM_00057 2.5e-211 citZ 2.3.3.1 C Belongs to the citrate synthase family
PCMLNIIM_00058 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PCMLNIIM_00059 2.2e-34 nrdH O Glutaredoxin
PCMLNIIM_00060 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PCMLNIIM_00061 3.8e-184 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PCMLNIIM_00062 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PCMLNIIM_00063 8.4e-138 divIVA D Cell division initiation protein
PCMLNIIM_00064 1.9e-144 ylmH S conserved protein, contains S4-like domain
PCMLNIIM_00065 6.5e-30 yggT D integral membrane protein
PCMLNIIM_00066 3.2e-101 sepF D cell septum assembly
PCMLNIIM_00067 6e-123 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PCMLNIIM_00068 1.7e-238 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PCMLNIIM_00069 7.1e-224 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PCMLNIIM_00070 2.2e-133 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PCMLNIIM_00071 5.6e-200 murG 2.4.1.227 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PCMLNIIM_00072 1e-251 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PCMLNIIM_00074 0.0 typA T GTP-binding protein TypA
PCMLNIIM_00075 1.9e-178 glk 2.7.1.2 G Glucokinase
PCMLNIIM_00076 2.4e-27 yqgQ S protein conserved in bacteria
PCMLNIIM_00077 5.2e-83 perR P Belongs to the Fur family
PCMLNIIM_00078 9.3e-92 dps P Belongs to the Dps family
PCMLNIIM_00079 1.7e-114 pilD 3.4.23.43 NOU Type II secretory pathway prepilin signal peptidase PulO and related peptidases
PCMLNIIM_00080 3.1e-171 3.5.2.6 V D-alanyl-D-alanine carboxypeptidase
PCMLNIIM_00081 9.4e-112 sodA 1.15.1.1 C radicals which are normally produced within the cells and which are toxic to biological systems
PCMLNIIM_00082 1.3e-185 holA 2.7.7.7 L DNA polymerase III delta subunit
PCMLNIIM_00083 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PCMLNIIM_00084 1.8e-63 S Domain of unknown function (DUF4430)
PCMLNIIM_00085 6.7e-73 S Psort location CytoplasmicMembrane, score
PCMLNIIM_00086 6e-129 sitB 3.6.3.35 P ABC transporter, ATP-binding protein
PCMLNIIM_00087 2.1e-133 mtsC P ABC-type Mn2 Zn2 transport systems, permease components
PCMLNIIM_00088 9.3e-167 sitA P Belongs to the bacterial solute-binding protein 9 family
PCMLNIIM_00089 3.6e-117 sirR K iron dependent repressor
PCMLNIIM_00090 2.1e-131 htpX O Belongs to the peptidase M48B family
PCMLNIIM_00091 7.7e-92 lemA S LemA family
PCMLNIIM_00092 6e-172 spd F DNA RNA non-specific endonuclease
PCMLNIIM_00093 0.0 2.4.1.21 GT5 M Right handed beta helix region
PCMLNIIM_00094 1.9e-132 S double-stranded DNA endodeoxyribonuclease activity
PCMLNIIM_00095 6.6e-306 hsdM 2.1.1.72 V type I restriction-modification system
PCMLNIIM_00096 3e-136 S Protein conserved in bacteria
PCMLNIIM_00097 1.9e-186 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
PCMLNIIM_00098 2.4e-309 S cog cog0433
PCMLNIIM_00099 4.9e-254 S SIR2-like domain
PCMLNIIM_00100 9.8e-123
PCMLNIIM_00101 0.0 hsdR 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
PCMLNIIM_00102 1.7e-45 K Helix-turn-helix domain
PCMLNIIM_00103 4.4e-45 S Phage derived protein Gp49-like (DUF891)
PCMLNIIM_00104 4.6e-132 sdh 1.1.1.276, 1.1.1.313, 1.1.1.381 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PCMLNIIM_00105 2.4e-217 MA20_36090 S Protein of unknown function (DUF2974)
PCMLNIIM_00106 1.8e-113 1.14.14.5 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PCMLNIIM_00107 1.7e-159 5.2.1.8 G hydrolase
PCMLNIIM_00108 7.8e-27 P Hemerythrin HHE cation binding domain protein
PCMLNIIM_00109 5.8e-142 XK27_00880 3.4.17.14, 3.5.1.28 M Glycosyl hydrolase, family 25
PCMLNIIM_00110 2.7e-82 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PCMLNIIM_00111 6e-117 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase
PCMLNIIM_00112 5.2e-175 S hydrolase
PCMLNIIM_00113 8.4e-23
PCMLNIIM_00114 2.1e-137 M LysM domain
PCMLNIIM_00115 1.1e-286 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PCMLNIIM_00117 3e-235 mntH P H( )-stimulated, divalent metal cation uptake system
PCMLNIIM_00118 1.1e-33 XK27_12190 S protein conserved in bacteria
PCMLNIIM_00120 2.5e-87 bioY S biotin synthase
PCMLNIIM_00121 1.7e-251 yegQ O Peptidase U32
PCMLNIIM_00122 1.5e-177 yegQ O Peptidase U32
PCMLNIIM_00124 6.9e-187 L Phage integrase family
PCMLNIIM_00125 7.5e-25
PCMLNIIM_00126 3.3e-104 D Plasmid replication protein
PCMLNIIM_00127 7.7e-90
PCMLNIIM_00128 1.4e-201 D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
PCMLNIIM_00129 2.1e-49
PCMLNIIM_00132 7.9e-18 3.2.1.51 GH95 U LPXTG cell wall anchor motif
PCMLNIIM_00133 1.5e-109 K Helix-turn-helix domain, rpiR family
PCMLNIIM_00134 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
PCMLNIIM_00135 0.0 3.5.1.28 M domain protein
PCMLNIIM_00136 4.3e-87 V abc transporter atp-binding protein
PCMLNIIM_00137 1.4e-14
PCMLNIIM_00139 1.1e-73 K Transcriptional regulatory protein, C terminal
PCMLNIIM_00140 4.4e-64 2.7.13.3 T Histidine kinase
PCMLNIIM_00141 8e-89 maa 2.3.1.79 GK Maltose O-acetyltransferase
PCMLNIIM_00142 4.5e-65 rmaI K Transcriptional regulator, MarR family
PCMLNIIM_00143 4.2e-240 EGP Major facilitator Superfamily
PCMLNIIM_00144 1.9e-108 XK27_00785 S CAAX protease self-immunity
PCMLNIIM_00146 0.0 S dextransucrase activity
PCMLNIIM_00147 0.0 S dextransucrase activity
PCMLNIIM_00148 1.1e-302 S dextransucrase activity
PCMLNIIM_00149 0.0 M Putative cell wall binding repeat
PCMLNIIM_00150 2.4e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
PCMLNIIM_00151 6.4e-105 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
PCMLNIIM_00152 0.0 S dextransucrase activity
PCMLNIIM_00153 7.3e-238 tcdB S dextransucrase activity
PCMLNIIM_00154 2.5e-89 S dextransucrase activity
PCMLNIIM_00155 0.0 S dextransucrase activity
PCMLNIIM_00156 0.0 S dextransucrase activity
PCMLNIIM_00157 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
PCMLNIIM_00158 2e-227 S dextransucrase activity
PCMLNIIM_00160 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
PCMLNIIM_00161 4.6e-121 yhfC S Putative membrane peptidase family (DUF2324)
PCMLNIIM_00162 1.1e-43 czrA K helix_turn_helix, Arsenical Resistance Operon Repressor
PCMLNIIM_00163 2.1e-15 S integral membrane protein
PCMLNIIM_00164 1.8e-195 mccF V LD-carboxypeptidase
PCMLNIIM_00165 3.1e-08 S Enterocin A Immunity
PCMLNIIM_00166 7.1e-34 S Immunity protein 41
PCMLNIIM_00167 0.0 M Putative cell wall binding repeat
PCMLNIIM_00168 2.8e-227 thrE K Psort location CytoplasmicMembrane, score
PCMLNIIM_00169 7.2e-178 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dihydroxyacetone kinase
PCMLNIIM_00170 1.7e-94 dhaL 2.7.1.121 S Dihydroxyacetone kinase
PCMLNIIM_00171 1.4e-57 dhaM 2.7.1.121 S dihydroxyacetone kinase, phosphotransfer subunit
PCMLNIIM_00172 1.6e-177 XK27_10475 S oxidoreductase
PCMLNIIM_00173 1.4e-195 gldA 1.1.1.6 C glycerol dehydrogenase
PCMLNIIM_00175 1.6e-282 XK27_07020 S Belongs to the UPF0371 family
PCMLNIIM_00176 3.2e-147 msmR K AraC family transcriptional regulator
PCMLNIIM_00177 0.0 rafA 3.2.1.22 G alpha-galactosidase
PCMLNIIM_00178 4.8e-195 msmE G Bacterial extracellular solute-binding protein
PCMLNIIM_00179 2.7e-144 msmF P Binding-protein-dependent transport system inner membrane component
PCMLNIIM_00180 2.2e-143 msmG P ABC-type sugar transport system, permease component
PCMLNIIM_00181 3e-188 msmX P Belongs to the ABC transporter superfamily
PCMLNIIM_00182 3.5e-97 iolC 2.7.1.4 G pfkB family carbohydrate kinase
PCMLNIIM_00183 2.5e-195 gtfA 2.4.1.329, 2.4.1.7 GH13 G Alpha amylase, catalytic domain
PCMLNIIM_00184 5.4e-308 dexB 3.2.1.10, 3.2.1.70 GH13 G COG0366 Glycosidases
PCMLNIIM_00185 3.4e-151 galR K Transcriptional regulator
PCMLNIIM_00186 4.8e-221 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PCMLNIIM_00187 6.3e-287 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
PCMLNIIM_00188 5.6e-194 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PCMLNIIM_00189 8.4e-201 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PCMLNIIM_00190 0.0 lacS G transporter
PCMLNIIM_00191 0.0 lacL 3.2.1.23 G -beta-galactosidase
PCMLNIIM_00192 3e-207 S Tetratricopeptide repeat
PCMLNIIM_00193 1.5e-155 yvgN C reductase
PCMLNIIM_00194 1.5e-102 yoaK S Protein of unknown function (DUF1275)
PCMLNIIM_00195 9.5e-107 drgA C Nitroreductase
PCMLNIIM_00196 9e-229 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PCMLNIIM_00197 7.5e-155 E Alpha/beta hydrolase of unknown function (DUF915)
PCMLNIIM_00198 3.6e-76 ywnA K Transcriptional regulator
PCMLNIIM_00199 1.3e-146 1.13.11.2 S glyoxalase
PCMLNIIM_00200 1.6e-108 XK27_02070 S nitroreductase
PCMLNIIM_00201 1e-37
PCMLNIIM_00202 5.5e-27 XK27_07105 K transcriptional
PCMLNIIM_00203 1.1e-06 S Protein of unknown function (DUF3169)
PCMLNIIM_00204 4.4e-169 ydhF S Aldo keto reductase
PCMLNIIM_00205 8.1e-97 K WHG domain
PCMLNIIM_00206 6e-123 V abc transporter atp-binding protein
PCMLNIIM_00207 2.4e-201 P FtsX-like permease family
PCMLNIIM_00208 1.5e-42 S Sugar efflux transporter for intercellular exchange
PCMLNIIM_00209 3.3e-83 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
PCMLNIIM_00210 0.0 S dextransucrase activity
PCMLNIIM_00211 4.6e-215 yfnA E amino acid
PCMLNIIM_00212 2.6e-50 XK27_01300 P Protein conserved in bacteria
PCMLNIIM_00213 3.7e-120 S Carbohydrate-binding domain-containing protein Cthe_2159
PCMLNIIM_00214 1.9e-18 csbD K CsbD-like
PCMLNIIM_00215 7.3e-107 S Protein of unknown function (DUF421)
PCMLNIIM_00216 1.8e-59 S Protein of unknown function (DUF3290)
PCMLNIIM_00217 3.9e-181 manA 5.3.1.8 G mannose-6-phosphate isomerase
PCMLNIIM_00218 2.3e-232 brnQ E Component of the transport system for branched-chain amino acids
PCMLNIIM_00219 2e-180 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PCMLNIIM_00221 8.5e-238 norM V Multidrug efflux pump
PCMLNIIM_00222 8.6e-148 K sequence-specific DNA binding
PCMLNIIM_00223 8.1e-19 V (ABC) transporter
PCMLNIIM_00224 8.5e-149 KLT Protein tyrosine kinase
PCMLNIIM_00225 2.5e-144 3.1.21.4 L Eco47II restriction endonuclease
PCMLNIIM_00226 5.2e-184 dcm 2.1.1.37 L C-5 cytosine-specific DNA methylase
PCMLNIIM_00227 2.7e-188
PCMLNIIM_00228 2.7e-241 6.3.2.2 H gamma-glutamylcysteine synthetase
PCMLNIIM_00229 4.4e-62 rplQ J ribosomal protein l17
PCMLNIIM_00230 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PCMLNIIM_00231 1.9e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PCMLNIIM_00232 4e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PCMLNIIM_00233 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PCMLNIIM_00234 2.7e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PCMLNIIM_00235 7.3e-118 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PCMLNIIM_00236 2.1e-230 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PCMLNIIM_00237 5.7e-58 rplO J binds to the 23S rRNA
PCMLNIIM_00238 1.9e-23 rpmD J ribosomal protein l30
PCMLNIIM_00239 1.3e-79 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PCMLNIIM_00240 1.9e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PCMLNIIM_00241 6.6e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PCMLNIIM_00242 1.2e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PCMLNIIM_00243 1.5e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PCMLNIIM_00244 1.6e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PCMLNIIM_00245 1.4e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PCMLNIIM_00246 3.9e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PCMLNIIM_00247 6e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PCMLNIIM_00248 3.5e-26 rpmC J Belongs to the universal ribosomal protein uL29 family
PCMLNIIM_00249 1.1e-71 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PCMLNIIM_00250 1.6e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PCMLNIIM_00251 7.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PCMLNIIM_00252 8.3e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PCMLNIIM_00253 6.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PCMLNIIM_00254 2.4e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PCMLNIIM_00255 5.7e-104 rplD J Forms part of the polypeptide exit tunnel
PCMLNIIM_00256 2.4e-110 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PCMLNIIM_00257 2.9e-48 rpsJ J Involved in the binding of tRNA to the ribosomes
PCMLNIIM_00258 3e-187 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PCMLNIIM_00259 0.0 XK27_09800 I Acyltransferase
PCMLNIIM_00260 9.7e-36 XK27_09805 S MORN repeat protein
PCMLNIIM_00261 7.5e-79 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PCMLNIIM_00262 8.6e-248 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PCMLNIIM_00263 1.4e-92 adk 2.7.4.3 F topology modulation protein
PCMLNIIM_00265 1.8e-234 rarA L ATPase related to the helicase subunit of the Holliday junction resolvase
PCMLNIIM_00266 8.4e-27 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PCMLNIIM_00267 6.3e-44 yrzL S Belongs to the UPF0297 family
PCMLNIIM_00268 1.8e-69 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PCMLNIIM_00269 3.2e-44 yrzB S Belongs to the UPF0473 family
PCMLNIIM_00270 3.1e-290 ccs S the current gene model (or a revised gene model) may contain a frame shift
PCMLNIIM_00271 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PCMLNIIM_00272 7.5e-14
PCMLNIIM_00273 5.4e-89 XK27_10930 K acetyltransferase
PCMLNIIM_00274 2.4e-115 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PCMLNIIM_00275 7.5e-121 yaaA S Belongs to the UPF0246 family
PCMLNIIM_00276 7.1e-167 XK27_01785 S cog cog1284
PCMLNIIM_00277 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PCMLNIIM_00279 2.5e-239 hisS 6.1.1.21 J histidyl-tRNA synthetase
PCMLNIIM_00280 5e-238 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
PCMLNIIM_00281 1.5e-219 metE 2.1.1.14 E Methionine synthase
PCMLNIIM_00282 1.5e-25 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PCMLNIIM_00283 6.7e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PCMLNIIM_00284 1e-81 XK26_04895
PCMLNIIM_00285 3.7e-49 2.7.11.1 K nucleotide-binding Protein
PCMLNIIM_00286 3e-103
PCMLNIIM_00287 3.6e-17 S Sigma-70, region 4
PCMLNIIM_00288 7.6e-44
PCMLNIIM_00289 4.6e-186 D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
PCMLNIIM_00290 2.2e-44
PCMLNIIM_00291 2.8e-111 S Plasmid replication protein
PCMLNIIM_00292 6.4e-22 S MerR HTH family regulatory protein
PCMLNIIM_00293 5.7e-220 sip L Belongs to the 'phage' integrase family
PCMLNIIM_00298 7.5e-117 nudL L hydrolase
PCMLNIIM_00299 6.3e-54 K transcriptional regulator, PadR family
PCMLNIIM_00300 2e-63 XK27_06920 S Protein of unknown function (DUF1700)
PCMLNIIM_00301 1.4e-108 S Putative adhesin
PCMLNIIM_00302 3.6e-159 XK27_06930 V domain protein
PCMLNIIM_00303 9.9e-97 XK27_06935 K transcriptional regulator
PCMLNIIM_00304 4.1e-54 ypaA M Membrane
PCMLNIIM_00305 1.9e-10
PCMLNIIM_00306 5.5e-25
PCMLNIIM_00307 1.1e-23 arpU S Transcriptional regulator, ArpU family
PCMLNIIM_00309 1.2e-243 S DNA primase
PCMLNIIM_00310 1.4e-140 KL Phage plasmid primase P4 family
PCMLNIIM_00311 9e-22
PCMLNIIM_00312 1.6e-14
PCMLNIIM_00314 9.6e-11
PCMLNIIM_00317 4.3e-14 K Cro/C1-type HTH DNA-binding domain
PCMLNIIM_00318 9.4e-185 sip L Belongs to the 'phage' integrase family
PCMLNIIM_00319 5.8e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PCMLNIIM_00320 1.8e-47 veg S Biofilm formation stimulator VEG
PCMLNIIM_00321 1e-246 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PCMLNIIM_00322 2.2e-73 rplI J binds to the 23S rRNA
PCMLNIIM_00323 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PCMLNIIM_00324 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PCMLNIIM_00325 2.4e-99 yvbG U UPF0056 membrane protein
PCMLNIIM_00326 5.1e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PCMLNIIM_00327 0.0 S Bacterial membrane protein, YfhO
PCMLNIIM_00328 5.8e-73 isaA GH23 M Immunodominant staphylococcal antigen A
PCMLNIIM_00329 3.5e-60 lytE M LysM domain protein
PCMLNIIM_00330 2.8e-132 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PCMLNIIM_00331 1.6e-154 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PCMLNIIM_00332 2.4e-150 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PCMLNIIM_00333 4.1e-90 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PCMLNIIM_00334 2.1e-133 S sequence-specific DNA binding
PCMLNIIM_00335 6.4e-235 ymfH S Peptidase M16
PCMLNIIM_00336 3.5e-230 ymfF S Peptidase M16
PCMLNIIM_00337 9.8e-59 yaaA S S4 domain protein YaaA
PCMLNIIM_00338 3.8e-204 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PCMLNIIM_00339 5.6e-275 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PCMLNIIM_00340 2.4e-192 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
PCMLNIIM_00341 2.2e-154 yvjA S membrane
PCMLNIIM_00342 5.1e-306 ybiT S abc transporter atp-binding protein
PCMLNIIM_00343 0.0 XK27_10405 S Bacterial membrane protein YfhO
PCMLNIIM_00347 6.2e-120 yoaK S Protein of unknown function (DUF1275)
PCMLNIIM_00348 8e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PCMLNIIM_00349 9.2e-207 htrA 3.4.21.107 O Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain'
PCMLNIIM_00350 2.6e-135 parB K Belongs to the ParB family
PCMLNIIM_00351 1.1e-256 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PCMLNIIM_00352 1.2e-197 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PCMLNIIM_00353 1.1e-29 yyzM S Protein conserved in bacteria
PCMLNIIM_00354 1.1e-203 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PCMLNIIM_00355 3e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PCMLNIIM_00356 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PCMLNIIM_00357 2.2e-39 yabO J Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
PCMLNIIM_00358 3e-60 divIC D Septum formation initiator
PCMLNIIM_00360 1.3e-238 XK27_09285 3.5.2.6 V Beta-lactamase enzyme family
PCMLNIIM_00361 1.1e-236 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PCMLNIIM_00362 2e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PCMLNIIM_00363 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PCMLNIIM_00364 3.8e-93 S haloacid dehalogenase-like hydrolase
PCMLNIIM_00365 9.4e-86 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PCMLNIIM_00366 6.2e-111 hsdS2 2.1.1.72 V Type I restriction modification DNA specificity domain
PCMLNIIM_00367 6.1e-35 M1-755 P Hemerythrin HHE cation binding domain protein
PCMLNIIM_00368 2.1e-241 XK27_04775 S hemerythrin HHE cation binding domain
PCMLNIIM_00369 6.2e-146 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PCMLNIIM_00370 1.1e-172 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PCMLNIIM_00371 1.6e-70 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PCMLNIIM_00372 5.1e-44 yktA S Belongs to the UPF0223 family
PCMLNIIM_00373 6.5e-142 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
PCMLNIIM_00374 1.4e-250 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
PCMLNIIM_00375 1.3e-154 pstS P phosphate
PCMLNIIM_00376 1.9e-156 pstC P probably responsible for the translocation of the substrate across the membrane
PCMLNIIM_00377 1.5e-155 pstA P phosphate transport system permease
PCMLNIIM_00378 4e-150 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PCMLNIIM_00379 1.9e-138 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PCMLNIIM_00380 3.2e-113 phoU P Plays a role in the regulation of phosphate uptake
PCMLNIIM_00381 0.0 pepN 3.4.11.2 E aminopeptidase
PCMLNIIM_00382 6e-194 xerS D Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division
PCMLNIIM_00383 0.0 K Probable Zinc-ribbon domain
PCMLNIIM_00384 9.2e-98
PCMLNIIM_00385 1.2e-222 L viral genome integration into host DNA
PCMLNIIM_00386 0.0
PCMLNIIM_00387 5.1e-237
PCMLNIIM_00388 2.9e-288 V ABC transporter transmembrane region
PCMLNIIM_00389 6.7e-125 bcrA V abc transporter atp-binding protein
PCMLNIIM_00390 4.1e-117 S ABC-type transport system involved in multi-copper enzyme maturation, permease component
PCMLNIIM_00391 2.2e-111 K Bacterial regulatory proteins, tetR family
PCMLNIIM_00392 2.9e-46 K Transcriptional regulator
PCMLNIIM_00393 1.8e-28 S Protein of unknown function (DUF1648)
PCMLNIIM_00394 1.9e-257 6.1.1.6 S Psort location CytoplasmicMembrane, score
PCMLNIIM_00395 4.5e-129 ecsA V AAA domain, putative AbiEii toxin, Type IV TA system
PCMLNIIM_00396 1e-105 K Transcriptional regulator
PCMLNIIM_00397 1.5e-36 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PCMLNIIM_00398 5.9e-55
PCMLNIIM_00399 8.7e-60
PCMLNIIM_00400 1.1e-49
PCMLNIIM_00401 1e-257 yheS_2 S ATPase components of ABC transporters with duplicated ATPase domains
PCMLNIIM_00402 2e-217 EGP Transmembrane secretion effector
PCMLNIIM_00403 4.3e-22
PCMLNIIM_00404 5.4e-262 dnaG 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PCMLNIIM_00405 2.5e-197
PCMLNIIM_00406 1.9e-186 lplA 6.3.1.20 H Lipoate-protein ligase
PCMLNIIM_00407 2.8e-40
PCMLNIIM_00408 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PCMLNIIM_00409 7.8e-301 malQ 2.4.1.25 GH77 G 4-alpha-glucanotransferase
PCMLNIIM_00410 6.2e-177 malR K Transcriptional regulator
PCMLNIIM_00411 2.5e-228 malX G ABC transporter
PCMLNIIM_00412 3.3e-250 malF P ABC transporter (Permease
PCMLNIIM_00413 9.8e-152 malG P ABC transporter (Permease
PCMLNIIM_00414 1.4e-212 msmX P Belongs to the ABC transporter superfamily
PCMLNIIM_00415 3e-24 tatA U protein secretion
PCMLNIIM_00416 1.2e-118 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PCMLNIIM_00417 3e-285 ywbL P COG0672 High-affinity Fe2 Pb2 permease
PCMLNIIM_00418 6.9e-231 ycdB P peroxidase
PCMLNIIM_00419 4.9e-146 ycdO P periplasmic lipoprotein involved in iron transport
PCMLNIIM_00420 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PCMLNIIM_00421 3.2e-84 lytC 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
PCMLNIIM_00422 0.0 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
PCMLNIIM_00423 0.0 lpdA 1.8.1.4 C Dehydrogenase
PCMLNIIM_00424 2.2e-217 acoC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PCMLNIIM_00425 1.4e-181 acoB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PCMLNIIM_00426 7.8e-185 acoA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
PCMLNIIM_00427 1.1e-215 hpk9 2.7.13.3 T protein histidine kinase activity
PCMLNIIM_00428 2.4e-234 2.7.13.3 T protein histidine kinase activity
PCMLNIIM_00429 0.0 S the current gene model (or a revised gene model) may contain a frame shift
PCMLNIIM_00430 1.7e-235 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PCMLNIIM_00431 3.8e-119 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PCMLNIIM_00432 1.5e-217 yeaB K Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PCMLNIIM_00433 4.8e-249 dacA1 3.4.16.4 M Belongs to the peptidase S11 family
PCMLNIIM_00434 5.5e-181 dacA1 3.4.16.4 M Belongs to the peptidase S11 family
PCMLNIIM_00435 1e-156 rssA S Phospholipase, patatin family
PCMLNIIM_00436 1.3e-103 estA E Lysophospholipase L1 and related esterases
PCMLNIIM_00437 8.8e-287 S unusual protein kinase
PCMLNIIM_00438 4.9e-39 S granule-associated protein
PCMLNIIM_00439 4.3e-288 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PCMLNIIM_00440 2.7e-197 S hmm pf01594
PCMLNIIM_00441 4e-107 G Belongs to the phosphoglycerate mutase family
PCMLNIIM_00442 4.1e-107 G Belongs to the phosphoglycerate mutase family
PCMLNIIM_00443 1.1e-107 pgm G Belongs to the phosphoglycerate mutase family
PCMLNIIM_00444 1.4e-150 supH 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
PCMLNIIM_00445 2.2e-244 S Polysaccharide biosynthesis protein
PCMLNIIM_00446 0.0 M Polysaccharide biosynthesis protein
PCMLNIIM_00447 5.3e-206 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PCMLNIIM_00448 1e-170 S glycosyl transferase family 2
PCMLNIIM_00449 4e-85
PCMLNIIM_00450 2e-205 M glycosyl transferase group 1
PCMLNIIM_00451 1.1e-164 S Glycosyl transferase family 2
PCMLNIIM_00452 5.1e-161 licD M LICD family
PCMLNIIM_00453 4.3e-127 tagA 2.4.1.187 GT26 M Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PCMLNIIM_00454 1.3e-257 cpsE M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
PCMLNIIM_00455 6.1e-113 cpsD D COG0489 ATPases involved in chromosome partitioning
PCMLNIIM_00456 7.2e-116 cps4C M biosynthesis protein
PCMLNIIM_00457 3.5e-137 cpsB 3.1.3.48 GM Capsular polysaccharide biosynthesis protein
PCMLNIIM_00458 8e-242 cps4A K Cell envelope-like function transcriptional attenuator common domain protein
PCMLNIIM_00459 1.3e-37
PCMLNIIM_00460 7.6e-10
PCMLNIIM_00461 6.1e-229 mutY L A G-specific adenine glycosylase
PCMLNIIM_00462 1.5e-42 XK27_05745
PCMLNIIM_00463 6.6e-47 rpsF J Binds together with S18 to 16S ribosomal RNA
PCMLNIIM_00464 2.5e-81 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PCMLNIIM_00465 1.7e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PCMLNIIM_00467 2.6e-123 XK27_01040 S Protein of unknown function (DUF1129)
PCMLNIIM_00468 1e-168 corA P COG0598 Mg2 and Co2 transporters
PCMLNIIM_00469 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
PCMLNIIM_00473 9.5e-33 blpT
PCMLNIIM_00474 3e-145 V 'abc transporter, ATP-binding protein
PCMLNIIM_00476 4.1e-187 pepP 3.4.11.9, 3.4.13.9 E Belongs to the peptidase M24B family
PCMLNIIM_00477 1.8e-83 comEB 3.5.4.12 F ComE operon protein 2
PCMLNIIM_00478 1.2e-97 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PCMLNIIM_00479 1.7e-61 yqhY S protein conserved in bacteria
PCMLNIIM_00480 8.1e-73 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PCMLNIIM_00481 9.2e-178 scrR K Transcriptional regulator
PCMLNIIM_00482 8.6e-289 scrB 3.2.1.26, 3.2.1.80 GH32 G invertase
PCMLNIIM_00483 0.0 scrA 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
PCMLNIIM_00484 1.2e-171 scrK 2.7.1.2, 2.7.1.4 GK Fructokinase
PCMLNIIM_00485 5.6e-188 manA 5.3.1.8 G mannose-6-phosphate isomerase
PCMLNIIM_00487 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PCMLNIIM_00488 3.3e-197 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PCMLNIIM_00489 4.2e-197 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PCMLNIIM_00490 4.9e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PCMLNIIM_00491 4.1e-182 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PCMLNIIM_00492 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PCMLNIIM_00496 2.9e-31 yozG K Transcriptional regulator
PCMLNIIM_00498 2.9e-179 ansA 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
PCMLNIIM_00499 1.6e-260 XK27_03190 5.2.1.8 S hydrolases of the HAD superfamily
PCMLNIIM_00500 2.5e-124 yebC M Membrane
PCMLNIIM_00501 0.0 KT response to antibiotic
PCMLNIIM_00502 6.8e-75 XK27_02470 K LytTr DNA-binding domain protein
PCMLNIIM_00503 1.3e-117 liaI S membrane
PCMLNIIM_00504 9.2e-300 O MreB/Mbl protein
PCMLNIIM_00506 5.8e-146 V Psort location CytoplasmicMembrane, score
PCMLNIIM_00509 8.9e-14
PCMLNIIM_00510 8.2e-238 dcuS 2.7.13.3 T protein histidine kinase activity
PCMLNIIM_00511 3.9e-246 2.7.13.3 T protein histidine kinase activity
PCMLNIIM_00512 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
PCMLNIIM_00513 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PCMLNIIM_00514 1.4e-125 S Protein of unknown function (DUF554)
PCMLNIIM_00515 4.4e-132 ecsA_2 V abc transporter atp-binding protein
PCMLNIIM_00516 3.3e-273 XK27_00765
PCMLNIIM_00517 4.9e-140 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PCMLNIIM_00518 4.5e-225 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PCMLNIIM_00519 4.3e-65 yhaI S Protein of unknown function (DUF805)
PCMLNIIM_00520 5e-69 yhaI J Protein of unknown function (DUF805)
PCMLNIIM_00523 3.7e-25
PCMLNIIM_00525 6.7e-173 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PCMLNIIM_00526 2.4e-45 ftsL D cell division protein FtsL
PCMLNIIM_00527 0.0 ftsI 3.4.16.4 M penicillin-binding protein
PCMLNIIM_00528 4.8e-185 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PCMLNIIM_00529 3.6e-220 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PCMLNIIM_00532 3e-262 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PCMLNIIM_00533 5.6e-63 yutD J protein conserved in bacteria
PCMLNIIM_00534 6.7e-223 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PCMLNIIM_00535 2.3e-66 XK27_09885 V Glycopeptide antibiotics resistance protein
PCMLNIIM_00538 0.0 mdlA V abc transporter atp-binding protein
PCMLNIIM_00539 0.0 mdlB V abc transporter atp-binding protein
PCMLNIIM_00547 3.3e-135 agrA KT phosphorelay signal transduction system
PCMLNIIM_00548 8e-08 S Class II bacteriocin
PCMLNIIM_00550 4e-154 blpT
PCMLNIIM_00551 5.3e-30 L transposase activity
PCMLNIIM_00552 2.5e-123 L Molecular Function DNA binding, Biological Process DNA recombination
PCMLNIIM_00553 2.4e-30 mesE M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PCMLNIIM_00554 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PCMLNIIM_00555 6.7e-76 L Transposase
PCMLNIIM_00556 3e-127 L overlaps another CDS with the same product name
PCMLNIIM_00557 4.6e-203 L Transposase IS116 IS110 IS902
PCMLNIIM_00560 2e-43 spiA K sequence-specific DNA binding
PCMLNIIM_00563 6.7e-07
PCMLNIIM_00564 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PCMLNIIM_00565 1.2e-163 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
PCMLNIIM_00566 0.0 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
PCMLNIIM_00567 8.7e-237 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PCMLNIIM_00568 3.3e-112 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PCMLNIIM_00569 3.1e-113 fnr5 K Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
PCMLNIIM_00570 9.6e-198 yhjX P Major Facilitator
PCMLNIIM_00571 9.2e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PCMLNIIM_00572 1.4e-72 V VanZ like family
PCMLNIIM_00573 1.9e-177 D nuclear chromosome segregation
PCMLNIIM_00574 2.2e-123 glnQ E abc transporter atp-binding protein
PCMLNIIM_00575 1.6e-272 glnP P ABC transporter
PCMLNIIM_00576 1.5e-152 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PCMLNIIM_00577 3.1e-17 S Protein of unknown function (DUF3021)
PCMLNIIM_00578 5.9e-124 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PCMLNIIM_00579 3.9e-183 tagO 2.7.8.33, 2.7.8.35 M transferase
PCMLNIIM_00580 2.4e-136 sufC O ABC-type transport system involved in Fe-S cluster assembly, ATPase component
PCMLNIIM_00581 6.3e-235 sufD O assembly protein SufD
PCMLNIIM_00582 3.8e-237 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PCMLNIIM_00583 2.3e-72 nifU C SUF system FeS assembly protein, NifU family
PCMLNIIM_00584 1e-273 sufB O assembly protein SufB
PCMLNIIM_00585 1.1e-310 oppA E ABC transporter substrate-binding protein
PCMLNIIM_00586 9.7e-161 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PCMLNIIM_00587 1.9e-165 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PCMLNIIM_00588 6.6e-198 oppD P Belongs to the ABC transporter superfamily
PCMLNIIM_00589 5.8e-169 oppF P Belongs to the ABC transporter superfamily
PCMLNIIM_00590 8e-26
PCMLNIIM_00591 1.2e-157 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PCMLNIIM_00592 2.8e-182 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PCMLNIIM_00593 2.9e-70 adcR K transcriptional
PCMLNIIM_00594 9.2e-135 adcC P ABC transporter, ATP-binding protein
PCMLNIIM_00595 5.6e-128 adcB P ABC transporter (Permease
PCMLNIIM_00596 4.5e-161 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
PCMLNIIM_00597 0.0 ptsG 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
PCMLNIIM_00598 1.5e-157 rgfB 3.1.3.90 L Endonuclease/Exonuclease/phosphatase family
PCMLNIIM_00599 1.8e-256 pgi 5.3.1.9 G Belongs to the GPI family
PCMLNIIM_00600 2.2e-154 Z012_04635 K sequence-specific DNA binding
PCMLNIIM_00601 4.8e-285 V ABC transporter
PCMLNIIM_00602 9.4e-127 yeeN K transcriptional regulatory protein
PCMLNIIM_00603 3.1e-48 yajC U protein transport
PCMLNIIM_00604 5.3e-141 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PCMLNIIM_00605 8.5e-145 cdsA 2.7.7.41 S Belongs to the CDS family
PCMLNIIM_00606 4.7e-230 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PCMLNIIM_00607 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PCMLNIIM_00608 0.0 WQ51_06230 S ABC transporter
PCMLNIIM_00609 4e-142 cmpC S abc transporter atp-binding protein
PCMLNIIM_00610 4.1e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PCMLNIIM_00611 2e-286 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PCMLNIIM_00613 3.8e-48
PCMLNIIM_00614 1.4e-53 S TM2 domain
PCMLNIIM_00615 3.1e-164 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PCMLNIIM_00616 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PCMLNIIM_00617 6.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PCMLNIIM_00618 2.8e-24 secE U Belongs to the SecE SEC61-gamma family
PCMLNIIM_00619 8.4e-96 nusG K Participates in transcription elongation, termination and antitermination
PCMLNIIM_00620 3e-67 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I phosphatidate phosphatase activity
PCMLNIIM_00621 7.8e-146 cof S Sucrose-6F-phosphate phosphohydrolase
PCMLNIIM_00622 1e-134 glcR K transcriptional regulator (DeoR family)
PCMLNIIM_00623 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PCMLNIIM_00624 3.8e-73 K transcriptional
PCMLNIIM_00625 4.1e-239 S COG1073 Hydrolases of the alpha beta superfamily
PCMLNIIM_00626 1.2e-25 yjdF S Protein of unknown function (DUF2992)
PCMLNIIM_00627 1.9e-158 cylA V abc transporter atp-binding protein
PCMLNIIM_00628 2.8e-130 cylB V ABC-2 type transporter
PCMLNIIM_00629 9e-75 K COG3279 Response regulator of the LytR AlgR family
PCMLNIIM_00630 4.4e-31 S Protein of unknown function (DUF3021)
PCMLNIIM_00631 4.6e-126 mta K Transcriptional
PCMLNIIM_00632 3e-122 yhcA V abc transporter atp-binding protein
PCMLNIIM_00633 5.3e-221 macB_2 V FtsX-like permease family
PCMLNIIM_00634 1.9e-272 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PCMLNIIM_00635 4.1e-150 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PCMLNIIM_00636 1.1e-77 yhaI S Protein of unknown function (DUF805)
PCMLNIIM_00637 2.2e-254 pepC 3.4.22.40 E aminopeptidase
PCMLNIIM_00638 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PCMLNIIM_00639 9.6e-109 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PCMLNIIM_00640 4e-95 ypsA S Belongs to the UPF0398 family
PCMLNIIM_00641 9.6e-50 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PCMLNIIM_00642 3.3e-222 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PCMLNIIM_00643 1.4e-276 mapZ D Early cell division protein that marks the future cell division site and supports proper FtsZ ring positioning
PCMLNIIM_00644 0.0 snf 2.7.11.1 L Superfamily II DNA RNA helicases, SNF2 family'
PCMLNIIM_00645 7.4e-23
PCMLNIIM_00646 4.7e-257 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PCMLNIIM_00647 4.1e-89 XK27_09675 K histone acetyltransferase HPA2 and related acetyltransferases
PCMLNIIM_00648 1.6e-298 mltG ADL Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PCMLNIIM_00649 1.2e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PCMLNIIM_00650 5.9e-118 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PCMLNIIM_00651 2e-26
PCMLNIIM_00652 7.7e-97 nudF 3.6.1.13 L AdP-ribose pyrophosphatase
PCMLNIIM_00653 2.7e-255 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PCMLNIIM_00654 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PCMLNIIM_00655 3.9e-187 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PCMLNIIM_00657 1.2e-175 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PCMLNIIM_00658 1.7e-168 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PCMLNIIM_00659 1.4e-135 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
PCMLNIIM_00660 1.3e-246 merA 1.16.1.1 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PCMLNIIM_00661 6.3e-124 E alpha/beta hydrolase fold
PCMLNIIM_00663 1.5e-89 O stage V sporulation protein K
PCMLNIIM_00664 1.2e-11
PCMLNIIM_00665 1.6e-197 ald 1.4.1.1 C Belongs to the AlaDH PNT family
PCMLNIIM_00667 4.5e-216 hipO 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
PCMLNIIM_00668 5.3e-136 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PCMLNIIM_00669 3.9e-114 S VIT family
PCMLNIIM_00670 3.5e-28 deoD_1 2.4.2.3 F Phosphorylase superfamily
PCMLNIIM_00671 1.5e-77 deoD_1 2.4.2.3 F Phosphorylase superfamily
PCMLNIIM_00672 6.2e-21
PCMLNIIM_00673 2.7e-28 XK27_00085 K Transcriptional
PCMLNIIM_00674 5.3e-197 yceA S Belongs to the UPF0176 family
PCMLNIIM_00675 2.3e-122 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PCMLNIIM_00676 9.6e-197 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PCMLNIIM_00677 0.0 lmrA V abc transporter atp-binding protein
PCMLNIIM_00678 0.0 mdlB V abc transporter atp-binding protein
PCMLNIIM_00679 2.5e-273 opuD M Belongs to the BCCT transporter (TC 2.A.15) family
PCMLNIIM_00680 8.1e-108 abiGI K Transcriptional regulator, AbiEi antitoxin
PCMLNIIM_00681 1.4e-102 XK27_00530 M CHAP domain protein
PCMLNIIM_00682 1.3e-65 traG U COG3505 Type IV secretory pathway, VirD4 components
PCMLNIIM_00684 2.1e-45 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PCMLNIIM_00685 1.9e-78 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PCMLNIIM_00686 1e-210 V permease protein
PCMLNIIM_00687 6.8e-122 macB V ABC transporter, ATP-binding protein
PCMLNIIM_00688 3.4e-180 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PCMLNIIM_00689 2.6e-127 2.1.1.223 S Putative SAM-dependent methyltransferase
PCMLNIIM_00690 0.0 carB 6.3.5.5 F carbamoyl-phosphate synthetase ammonia chain
PCMLNIIM_00691 9.3e-211 carA 6.3.5.5 F carbamoyl-phosphate synthetase glutamine chain
PCMLNIIM_00692 1.3e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PCMLNIIM_00693 1.6e-222 pyrP F uracil Permease
PCMLNIIM_00694 4.8e-88 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PCMLNIIM_00695 1.1e-161 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PCMLNIIM_00696 4.8e-76 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PCMLNIIM_00697 1.8e-167 fhuR K transcriptional regulator (lysR family)
PCMLNIIM_00699 3.4e-69 K Helix-turn-helix
PCMLNIIM_00702 9.2e-141 ppiA 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PCMLNIIM_00703 0.0 pts33BCA 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
PCMLNIIM_00704 6e-08 uvrX 2.7.7.7 L impB/mucB/samB family
PCMLNIIM_00705 1.2e-255 cycA E permease
PCMLNIIM_00706 2e-39 ynzC S UPF0291 protein
PCMLNIIM_00707 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PCMLNIIM_00708 3.7e-176 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PCMLNIIM_00709 7.3e-220 S membrane
PCMLNIIM_00710 1.7e-210 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PCMLNIIM_00711 1.9e-292 nptA P COG1283 Na phosphate symporter
PCMLNIIM_00712 1.4e-113 3.4.17.14, 3.5.1.28 NU amidase activity
PCMLNIIM_00713 3.4e-81 S Bacterial inner membrane protein
PCMLNIIM_00714 2.5e-144 XK27_04800 S Sucrose-6F-phosphate phosphohydrolase
PCMLNIIM_00715 4.6e-104 mur1 3.4.17.14, 3.5.1.28 NU amidase activity
PCMLNIIM_00716 2.1e-52 glnB K Belongs to the P(II) protein family
PCMLNIIM_00717 4.7e-227 amt P Ammonium Transporter
PCMLNIIM_00718 6.2e-157 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PCMLNIIM_00719 1.2e-54 yabA L Involved in initiation control of chromosome replication
PCMLNIIM_00720 2e-133 yaaT S stage 0 sporulation protein
PCMLNIIM_00721 1e-159 holB 2.7.7.7 L dna polymerase iii
PCMLNIIM_00722 1.2e-109 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PCMLNIIM_00724 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PCMLNIIM_00725 2.6e-135 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PCMLNIIM_00726 7.7e-166 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PCMLNIIM_00727 2e-45 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PCMLNIIM_00728 4.6e-129 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PCMLNIIM_00729 7.3e-94 XK27_09705 6.1.1.14 S HD superfamily hydrolase
PCMLNIIM_00730 2.2e-101 ybhL S Belongs to the BI1 family
PCMLNIIM_00731 7.1e-12 ycdA S Domain of unknown function (DUF4352)
PCMLNIIM_00732 2.1e-243 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PCMLNIIM_00733 1.8e-90 K transcriptional regulator
PCMLNIIM_00734 1.6e-36 yneF S UPF0154 protein
PCMLNIIM_00735 5.8e-149 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PCMLNIIM_00736 1.3e-184 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PCMLNIIM_00737 3.9e-98 XK27_09740 S Phosphoesterase
PCMLNIIM_00738 1.1e-86 ykuL S CBS domain
PCMLNIIM_00739 1.9e-133 xerD L tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site
PCMLNIIM_00740 4.1e-122 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PCMLNIIM_00741 2.2e-94 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PCMLNIIM_00742 3.4e-132 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PCMLNIIM_00743 1.4e-13 yidD M Could be involved in insertion of integral membrane proteins into the membrane
PCMLNIIM_00744 2.4e-259 trkH P Cation transport protein
PCMLNIIM_00745 1.2e-247 trkA P Potassium transporter peripheral membrane component
PCMLNIIM_00746 6.1e-96 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PCMLNIIM_00747 3.2e-90 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PCMLNIIM_00748 1.4e-105 bcrC 3.6.1.27 I Membrane-associated phospholipid phosphatase
PCMLNIIM_00749 3e-154 K sequence-specific DNA binding
PCMLNIIM_00750 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PCMLNIIM_00751 6.4e-54 yhaI L Membrane
PCMLNIIM_00752 1.6e-38 S Domain of unknown function (DUF4173)
PCMLNIIM_00753 6.8e-95 ureI S AmiS/UreI family transporter
PCMLNIIM_00754 7.6e-46 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
PCMLNIIM_00755 7.8e-54 ureB 3.5.1.5 E Belongs to the urease beta subunit family
PCMLNIIM_00756 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
PCMLNIIM_00757 6.6e-78 ureE O enzyme active site formation
PCMLNIIM_00758 5.3e-130 ureF O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
PCMLNIIM_00759 9.5e-112 ureG KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
PCMLNIIM_00760 5.2e-161 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
PCMLNIIM_00761 1.3e-176 cbiM P biosynthesis protein CbiM
PCMLNIIM_00762 1.1e-136 P cobalt transport protein
PCMLNIIM_00763 1.4e-130 cbiO P ABC transporter
PCMLNIIM_00764 6.3e-138 ET ABC transporter substrate-binding protein
PCMLNIIM_00765 1.4e-164 metQ M Belongs to the NlpA lipoprotein family
PCMLNIIM_00766 9.1e-264 dapE 3.5.1.18 E COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases
PCMLNIIM_00767 6.4e-188 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PCMLNIIM_00768 1.2e-99 metI P ABC transporter (Permease
PCMLNIIM_00769 1.8e-210 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
PCMLNIIM_00770 6.1e-120 ktrA P COG0569 K transport systems, NAD-binding component
PCMLNIIM_00771 7.2e-237 P COG0168 Trk-type K transport systems, membrane components
PCMLNIIM_00772 3.8e-128 rsmG 2.1.1.170 J Ribosomal RNA small subunit methyltransferase G
PCMLNIIM_00773 1.2e-89 yceD K metal-binding, possibly nucleic acid-binding protein
PCMLNIIM_00774 7.9e-123 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCMLNIIM_00775 9.8e-283 T PhoQ Sensor
PCMLNIIM_00776 1.4e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PCMLNIIM_00777 2.3e-215 dnaB L Replication initiation and membrane attachment
PCMLNIIM_00778 1.5e-166 dnaI L Primosomal protein DnaI
PCMLNIIM_00779 2.6e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PCMLNIIM_00780 1.1e-102
PCMLNIIM_00781 2e-228 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PCMLNIIM_00782 2.7e-61 manO S protein conserved in bacteria
PCMLNIIM_00783 3.3e-169 manN G PTS system mannose fructose sorbose family IID component
PCMLNIIM_00784 1.7e-116 manM G pts system
PCMLNIIM_00785 4.9e-174 manL 2.7.1.191 G pts system
PCMLNIIM_00786 2e-67 manO S Protein conserved in bacteria
PCMLNIIM_00787 3e-162 manN G PTS system mannose fructose sorbose family IID component
PCMLNIIM_00788 6.3e-132 manY G pts system
PCMLNIIM_00789 3.1e-168 manL 2.7.1.191 G pts system
PCMLNIIM_00790 1.4e-138 XK27_00940 1.2.1.70, 3.5.1.9 S Metal-dependent hydrolase
PCMLNIIM_00791 3.5e-154 yitU 3.1.3.104 S hydrolases of the HAD superfamily
PCMLNIIM_00792 5.6e-248 pbuO S permease
PCMLNIIM_00793 4.7e-76 ydiB 2.7.1.221, 5.1.1.1 M ATPase or kinase
PCMLNIIM_00794 6e-91 XK27_05885 2.3.1.82 M phosphinothricin N-acetyltransferase activity
PCMLNIIM_00795 2.8e-211 brpA K Transcriptional
PCMLNIIM_00796 2.3e-81 rimP S Required for maturation of 30S ribosomal subunits
PCMLNIIM_00797 2.4e-196 nusA K Participates in both transcription termination and antitermination
PCMLNIIM_00798 1e-47 ylxR K Nucleic-acid-binding protein implicated in transcription termination
PCMLNIIM_00799 8e-42 ylxQ J ribosomal protein
PCMLNIIM_00800 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PCMLNIIM_00801 8.6e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PCMLNIIM_00802 1.3e-99 yvdD 3.2.2.10 S Belongs to the LOG family
PCMLNIIM_00803 1e-273 murE 6.3.2.13, 6.3.2.7 M to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PCMLNIIM_00804 4.3e-287 ytgP S Membrane protein involved in the export of O-antigen and teichoic acid
PCMLNIIM_00805 0.0 pacL 3.6.3.8, 3.6.3.9 P cation transport ATPase
PCMLNIIM_00806 3.3e-200 metB 2.5.1.48, 4.4.1.8 E cystathionine
PCMLNIIM_00807 1.1e-222 malY 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PCMLNIIM_00808 0.0 S dextransucrase activity
PCMLNIIM_00809 4.1e-256 noxE P NADH oxidase
PCMLNIIM_00810 3.3e-294 yfmM S abc transporter atp-binding protein
PCMLNIIM_00811 4.3e-84 XK27_01265 S ECF-type riboflavin transporter, S component
PCMLNIIM_00812 4.4e-155 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
PCMLNIIM_00813 1.8e-84 S ECF-type riboflavin transporter, S component
PCMLNIIM_00815 2.1e-238 XK27_08130 K Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PCMLNIIM_00816 7e-56 nrdD_1 1.1.98.6, 1.17.4.1 F Ribonucleoside-triphosphate reductase
PCMLNIIM_00818 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PCMLNIIM_00819 3.5e-91 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PCMLNIIM_00820 6.6e-198 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PCMLNIIM_00821 2.3e-22 WQ51_00220 K Helix-turn-helix domain
PCMLNIIM_00822 3.6e-78 S Protein of unknown function (DUF3278)
PCMLNIIM_00823 0.0 smc D Required for chromosome condensation and partitioning
PCMLNIIM_00824 2.5e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PCMLNIIM_00825 1.7e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PCMLNIIM_00826 6.2e-199 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PCMLNIIM_00827 4.8e-122 alkD L Dna alkylation repair
PCMLNIIM_00828 6.1e-296 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PCMLNIIM_00829 1.1e-89 pat 2.3.1.183 M acetyltransferase
PCMLNIIM_00830 2.4e-270 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PCMLNIIM_00831 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PCMLNIIM_00832 8.5e-125 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 E hydrolase
PCMLNIIM_00833 2.5e-121 sdaAB 4.3.1.17 E L-serine dehydratase
PCMLNIIM_00834 1.5e-147 sdaAA 4.3.1.17 E L-serine dehydratase
PCMLNIIM_00835 0.0 fruA 3.2.1.1, 3.2.1.26, 3.2.1.65, 3.2.1.80 GH13,GH32 G Belongs to the glycosyl hydrolase 32 family
PCMLNIIM_00836 2e-202 S Protein of unknown function DUF262
PCMLNIIM_00837 2.1e-151 S Protein of unknown function DUF262
PCMLNIIM_00838 3.8e-78 mutT 3.6.1.55 F COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
PCMLNIIM_00839 4e-79 3.4.21.89 S RDD family
PCMLNIIM_00840 4.2e-164 K sequence-specific DNA binding
PCMLNIIM_00841 8.9e-153 V ABC transporter, ATP-binding protein
PCMLNIIM_00842 7.8e-97 S ABC-2 family transporter protein
PCMLNIIM_00843 1.1e-151 K sequence-specific DNA binding
PCMLNIIM_00844 1e-50 ywrO S general stress protein
PCMLNIIM_00845 0.0 prtA 3.2.1.23 O Belongs to the peptidase S8 family
PCMLNIIM_00846 3.4e-77 yfiQ K Acetyltransferase (GNAT) domain
PCMLNIIM_00847 4.6e-143 S ABC-2 family transporter protein
PCMLNIIM_00848 1.2e-141 S ABC-2 family transporter protein
PCMLNIIM_00849 6.1e-185 S AAA domain, putative AbiEii toxin, Type IV TA system
PCMLNIIM_00850 2.6e-101 desR K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PCMLNIIM_00851 1.1e-187 desK 2.7.13.3 T Histidine kinase
PCMLNIIM_00852 2e-132 yvfS V ABC-2 type transporter
PCMLNIIM_00853 4.1e-156 XK27_09825 V 'abc transporter, ATP-binding protein
PCMLNIIM_00856 3.3e-164 yocS S Transporter
PCMLNIIM_00857 4.4e-82 cdd 2.4.2.4, 3.5.4.5 F cytidine deaminase activity
PCMLNIIM_00858 1.2e-116 yvfS V Transporter
PCMLNIIM_00859 4.1e-156 XK27_09825 V abc transporter atp-binding protein
PCMLNIIM_00860 1.3e-16 liaI KT membrane
PCMLNIIM_00861 2.2e-29 liaI KT membrane
PCMLNIIM_00862 8.8e-92 XK27_05000 S metal cluster binding
PCMLNIIM_00863 0.0 V ABC transporter (permease)
PCMLNIIM_00864 1.1e-133 macB2 V ABC transporter, ATP-binding protein
PCMLNIIM_00865 2.2e-147 T Histidine kinase
PCMLNIIM_00866 5.4e-124 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCMLNIIM_00867 2.5e-98 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PCMLNIIM_00868 3.8e-224 pbuX F xanthine permease
PCMLNIIM_00869 4.5e-59 pdxH S pyridoxamine 5'-phosphate oxidase
PCMLNIIM_00870 2.7e-118 V (ABC) transporter
PCMLNIIM_00871 2.1e-112 V (ABC) transporter
PCMLNIIM_00873 6.1e-191 phoH T phosphate starvation-inducible protein PhoH
PCMLNIIM_00874 6e-137 sip M LysM domain protein
PCMLNIIM_00875 3.7e-34 yozE S Belongs to the UPF0346 family
PCMLNIIM_00876 4.5e-160 cvfB S Protein conserved in bacteria
PCMLNIIM_00877 1.7e-91 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PCMLNIIM_00878 1.7e-131 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PCMLNIIM_00879 8.5e-213 sptS 2.7.13.3 T Histidine kinase
PCMLNIIM_00880 1.7e-117 T response regulator
PCMLNIIM_00881 3.7e-111 2.7.6.5 S Region found in RelA / SpoT proteins
PCMLNIIM_00882 3.3e-112 K Acetyltransferase (GNAT) family
PCMLNIIM_00883 0.0 lmrA2 V abc transporter atp-binding protein
PCMLNIIM_00884 0.0 lmrA1 V abc transporter atp-binding protein
PCMLNIIM_00885 3.3e-74 K DNA-binding transcription factor activity
PCMLNIIM_00886 4.6e-70 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PCMLNIIM_00887 7.8e-286 S Psort location CytoplasmicMembrane, score
PCMLNIIM_00888 1.4e-256 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
PCMLNIIM_00889 6.1e-210 nadD 2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55 H adenylyltransferase
PCMLNIIM_00890 1.5e-130 3.6.1.13, 3.6.1.55 F AdP-ribose pyrophosphatase
PCMLNIIM_00891 5e-26 U response to pH
PCMLNIIM_00892 0.0 yfmR S abc transporter atp-binding protein
PCMLNIIM_00893 2e-222 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PCMLNIIM_00894 1.3e-139 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PCMLNIIM_00895 2.9e-151 XK27_08360 S EDD domain protein, DegV family
PCMLNIIM_00896 5e-63 WQ51_03320 S cog cog4835
PCMLNIIM_00897 2.9e-133 ydaF_2 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PCMLNIIM_00898 1.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PCMLNIIM_00899 4.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
PCMLNIIM_00900 7.1e-95 2.3.1.128 K acetyltransferase
PCMLNIIM_00901 2.8e-254 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
PCMLNIIM_00902 9.3e-294 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
PCMLNIIM_00903 2.4e-223 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PCMLNIIM_00904 8e-213 iscS2 2.8.1.7 E Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes
PCMLNIIM_00906 1.7e-232 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PCMLNIIM_00907 4.6e-260 gor 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PCMLNIIM_00908 0.0 fruA 2.7.1.202 G phosphotransferase system
PCMLNIIM_00909 7.6e-166 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PCMLNIIM_00910 2e-124 fruR K transcriptional
PCMLNIIM_00911 2.4e-207 rny D Endoribonuclease that initiates mRNA decay
PCMLNIIM_00912 4.7e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PCMLNIIM_00913 5.7e-138 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
PCMLNIIM_00914 4.3e-158 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PCMLNIIM_00915 5.4e-256 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
PCMLNIIM_00916 1.5e-71 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PCMLNIIM_00917 5.6e-54 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PCMLNIIM_00918 2.6e-233 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PCMLNIIM_00919 1.8e-125 IQ reductase
PCMLNIIM_00920 4.8e-160 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
PCMLNIIM_00921 2e-172 fabK 1.3.1.9 S 2-Nitropropane dioxygenase
PCMLNIIM_00922 3.3e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PCMLNIIM_00923 1.1e-170 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PCMLNIIM_00924 5.2e-72 marR K Transcriptional regulator, MarR family
PCMLNIIM_00925 2.1e-140 phaB 5.3.3.14, 5.3.3.18 I Belongs to the enoyl-CoA hydratase isomerase family
PCMLNIIM_00926 1.3e-111 S HAD hydrolase, family IA, variant 3
PCMLNIIM_00927 5.3e-256 lysC 2.7.2.4 E Belongs to the aspartokinase family
PCMLNIIM_00928 4e-192 asnA 6.3.1.1 E aspartate--ammonia ligase
PCMLNIIM_00929 1.2e-247 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PCMLNIIM_00930 7.5e-138 recX 2.4.1.337 GT4 S Regulatory protein RecX
PCMLNIIM_00931 7.8e-102 ygaC J Belongs to the UPF0374 family
PCMLNIIM_00932 1.4e-107 S Domain of unknown function (DUF1803)
PCMLNIIM_00933 3.5e-166 ppaC 3.6.1.1 C inorganic pyrophosphatase
PCMLNIIM_00940 0.0 2.4.1.5 GH13 M KxYKxGKxW signal domain protein
PCMLNIIM_00941 4.6e-226 rodA D Belongs to the SEDS family
PCMLNIIM_00942 9.3e-245 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PCMLNIIM_00943 6.9e-113 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
PCMLNIIM_00944 3.5e-174 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PCMLNIIM_00945 3.1e-136 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PCMLNIIM_00946 2.1e-67 GnaT 2.5.1.16 K acetyltransferase
PCMLNIIM_00947 0.0 recJ L Single-strand DNA-specific exonuclease, C terminal domain
PCMLNIIM_00948 1.1e-92 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PCMLNIIM_00949 2.7e-182 metA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PCMLNIIM_00950 1.3e-125 dnaD
PCMLNIIM_00951 1.7e-119 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PCMLNIIM_00952 6e-07 KT response to antibiotic
PCMLNIIM_00953 4.6e-236 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PCMLNIIM_00954 3.5e-29 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PCMLNIIM_00955 1.7e-154 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PCMLNIIM_00956 4.2e-147 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PCMLNIIM_00957 8.3e-73 argR K Regulates arginine biosynthesis genes
PCMLNIIM_00958 6e-302 recN L May be involved in recombinational repair of damaged DNA
PCMLNIIM_00959 2e-144 DegV S DegV family
PCMLNIIM_00960 2.2e-162 ypmR E COG2755 Lysophospholipase L1 and related esterases
PCMLNIIM_00961 1.2e-95 ypmS S Protein conserved in bacteria
PCMLNIIM_00962 6.3e-39 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PCMLNIIM_00964 6.2e-179 pyrD 1.3.1.14, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate
PCMLNIIM_00965 4.6e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PCMLNIIM_00966 4.2e-289 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PCMLNIIM_00967 6.6e-190 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PCMLNIIM_00968 3.1e-275 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PCMLNIIM_00969 5.9e-111 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PCMLNIIM_00970 0.0 dnaE 2.7.7.7 L DNA polymerase
PCMLNIIM_00971 5.1e-187 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PCMLNIIM_00972 2.7e-277 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PCMLNIIM_00973 3.4e-29 L COG1943 Transposase and inactivated derivatives
PCMLNIIM_00974 3.8e-18 S Domain of unknown function (DUF4649)
PCMLNIIM_00975 3.6e-177 XK27_08835 S ABC transporter substrate binding protein
PCMLNIIM_00976 2.6e-147 XK27_08840 S Belongs to the binding-protein-dependent transport system permease family
PCMLNIIM_00977 3.1e-136 XK27_08845 S abc transporter atp-binding protein
PCMLNIIM_00978 6e-310 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PCMLNIIM_00979 9.5e-149 estA CE1 S Esterase
PCMLNIIM_00980 1.6e-126 XK27_08875 O Zinc-dependent metalloprotease
PCMLNIIM_00981 1.1e-17 XK27_08880
PCMLNIIM_00982 1e-75 fld C Flavodoxin
PCMLNIIM_00983 3.3e-278 clcA P Chloride transporter, ClC family
PCMLNIIM_00984 1.9e-40 pheA 1.3.1.12, 2.3.1.79, 4.2.1.51, 5.4.99.5 E Chorismate mutase
PCMLNIIM_00985 2.1e-211 XK27_05110 P Chloride transporter ClC family
PCMLNIIM_00986 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PCMLNIIM_00988 4.8e-131 K cell adhesion
PCMLNIIM_00989 6.6e-08
PCMLNIIM_00990 6.5e-21 WQ51_02665 S Protein of unknown function (DUF3042)
PCMLNIIM_00991 6e-163 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PCMLNIIM_00992 1.5e-86 ytsP 1.8.4.14 T GAF domain-containing protein
PCMLNIIM_00993 2.7e-302 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PCMLNIIM_00994 2.1e-171 birA 6.3.4.15 HK Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PCMLNIIM_00995 2.3e-210 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PCMLNIIM_00996 3e-67 ytxH S General stress protein
PCMLNIIM_00997 3.7e-08 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PCMLNIIM_00998 1.2e-146 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PCMLNIIM_00999 1.7e-168 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PCMLNIIM_01000 2.2e-41 pspC KT PspC domain
PCMLNIIM_01001 9.3e-85 ydcK S Belongs to the SprT family
PCMLNIIM_01002 0.0 yhgF K Transcriptional accessory protein
PCMLNIIM_01004 1.6e-155 XK27_03015 S permease
PCMLNIIM_01005 4.9e-148 ycgQ S TIGR03943 family
PCMLNIIM_01006 4e-290 sulP P Sulfate permease and related transporters (MFS superfamily)
PCMLNIIM_01007 7.3e-104
PCMLNIIM_01008 2.5e-123 estA E GDSL-like Lipase/Acylhydrolase
PCMLNIIM_01009 7.8e-98 S CAAX protease self-immunity
PCMLNIIM_01010 5e-52
PCMLNIIM_01012 2.4e-62 yqeB S Pyrimidine dimer DNA glycosylase
PCMLNIIM_01013 2.4e-60 S Protein of unknown function (DUF1722)
PCMLNIIM_01014 2.2e-19 S Bacterial lipoprotein
PCMLNIIM_01015 6.8e-11
PCMLNIIM_01016 8.6e-123 V CAAX protease self-immunity
PCMLNIIM_01017 6.4e-48
PCMLNIIM_01018 2.1e-76 K TetR family transcriptional regulator
PCMLNIIM_01019 2.9e-81 Q Methyltransferase domain
PCMLNIIM_01020 4.6e-131 ybbA S Putative esterase
PCMLNIIM_01021 5.1e-171 fatB P COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
PCMLNIIM_01022 5.8e-135 fecE 3.6.3.34 HP ABC transporter
PCMLNIIM_01023 6.1e-159 fecD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PCMLNIIM_01024 1.4e-128 V CAAX protease self-immunity
PCMLNIIM_01025 5.2e-153 S Domain of unknown function (DUF4300)
PCMLNIIM_01026 0.0 M family 8
PCMLNIIM_01027 3.5e-109 cutC P Participates in the control of copper homeostasis
PCMLNIIM_01028 4.8e-65 S CAAX amino terminal protease family
PCMLNIIM_01029 2.8e-97 ypgQ F HD superfamily hydrolase
PCMLNIIM_01030 3e-96 XK27_08140 K Bacterial regulatory proteins, tetR family
PCMLNIIM_01031 5.2e-153 yitS S EDD domain protein, DegV family
PCMLNIIM_01032 9.1e-204 yeaN P transporter
PCMLNIIM_01033 1.3e-131 S Domain of unknown function (DUF4336)
PCMLNIIM_01034 4.4e-130 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
PCMLNIIM_01035 2.8e-157 K DNA-binding helix-turn-helix protein
PCMLNIIM_01036 5.2e-139 S CAAX protease self-immunity
PCMLNIIM_01037 7.9e-76 XK27_04435 3.5.4.5 J Acetyltransferase GNAT family
PCMLNIIM_01038 6.5e-142 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
PCMLNIIM_01039 6.9e-96 S HD domain
PCMLNIIM_01040 6.1e-252 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PCMLNIIM_01041 2e-97 mip S hydroperoxide reductase activity
PCMLNIIM_01042 6.5e-201 I acyl-CoA dehydrogenase
PCMLNIIM_01043 2.8e-150 ydiA P C4-dicarboxylate transporter malic acid transport
PCMLNIIM_01044 1.3e-241 msrR K Transcriptional regulator
PCMLNIIM_01045 2.5e-152 pheA 4.2.1.51 E Prephenate dehydratase
PCMLNIIM_01046 6.7e-76 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PCMLNIIM_01047 8.3e-235 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PCMLNIIM_01048 7e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PCMLNIIM_01049 4.2e-53 yheA S Belongs to the UPF0342 family
PCMLNIIM_01050 3.1e-206 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
PCMLNIIM_01051 3.8e-218 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PCMLNIIM_01052 5.9e-202 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PCMLNIIM_01053 4.5e-160 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PCMLNIIM_01054 1.5e-118 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PCMLNIIM_01055 3.8e-218 ywbD 2.1.1.191 J Methyltransferase
PCMLNIIM_01056 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
PCMLNIIM_01057 1.2e-25 WQ51_00785
PCMLNIIM_01058 7.4e-247 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PCMLNIIM_01059 3.3e-77 yueI S Protein of unknown function (DUF1694)
PCMLNIIM_01060 1.5e-33 3.4.24.40 U Large extracellular alpha-helical protein
PCMLNIIM_01061 8.4e-199 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PCMLNIIM_01062 6.8e-198 yyaQ S YjbR
PCMLNIIM_01063 7.1e-181 ccpA K Catabolite control protein A
PCMLNIIM_01064 1.6e-210 pepQ 3.4.13.9 E Belongs to the peptidase M24B family
PCMLNIIM_01065 1.3e-63 yugI 5.3.1.9 J RNA binding protein, contains ribosomal protein S1 domain
PCMLNIIM_01066 2.1e-276 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PCMLNIIM_01067 6.6e-81 smpB O the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PCMLNIIM_01068 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PCMLNIIM_01069 2e-33 secG U Preprotein translocase subunit SecG
PCMLNIIM_01070 2.2e-221 mdtG EGP Major facilitator Superfamily
PCMLNIIM_01071 5.1e-102 coaE 2.7.1.24, 3.2.2.23, 4.2.99.18 GH23 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PCMLNIIM_01072 4.1e-150 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PCMLNIIM_01073 2.2e-165 era M An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PCMLNIIM_01074 2e-65 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
PCMLNIIM_01075 4.6e-88 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PCMLNIIM_01076 7.1e-150 licT K antiterminator
PCMLNIIM_01077 1.7e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PCMLNIIM_01078 0.0 pbp2b 3.4.16.4 M penicillin-binding protein
PCMLNIIM_01079 3.3e-147 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PCMLNIIM_01080 6.9e-153 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PCMLNIIM_01081 3.5e-151 I Alpha/beta hydrolase family
PCMLNIIM_01082 6.6e-08
PCMLNIIM_01083 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
PCMLNIIM_01084 1.4e-78 feoA P FeoA domain protein
PCMLNIIM_01085 6.4e-131 glnQ 3.6.3.21 E abc transporter atp-binding protein
PCMLNIIM_01086 5.8e-118 WQ51_01820 P Binding-protein-dependent transport system inner membrane component
PCMLNIIM_01087 1e-34 ykuJ S protein conserved in bacteria
PCMLNIIM_01088 4.1e-181 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PCMLNIIM_01089 0.0 clpE O Belongs to the ClpA ClpB family
PCMLNIIM_01090 7.9e-87 mutT 3.5.4.33, 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
PCMLNIIM_01091 6.2e-48 XK27_09445 S Domain of unknown function (DUF1827)
PCMLNIIM_01092 1.8e-173 S oxidoreductase
PCMLNIIM_01093 7.8e-230 murN 2.3.2.16 V FemAB family
PCMLNIIM_01094 6.4e-117 M Pfam SNARE associated Golgi protein
PCMLNIIM_01095 1.9e-107 S Domain of Unknown Function with PDB structure (DUF3862)
PCMLNIIM_01098 2.5e-204 rpsA 1.17.7.4 J ribosomal protein S1
PCMLNIIM_01101 3.7e-16 S Protein of unknown function (DUF2969)
PCMLNIIM_01102 5.3e-200 ilvE 2.6.1.42 E Aminotransferase
PCMLNIIM_01103 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PCMLNIIM_01104 1.4e-10
PCMLNIIM_01106 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PCMLNIIM_01107 1.1e-107 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PCMLNIIM_01108 4.8e-13 L Helix-hairpin-helix DNA-binding motif class 1
PCMLNIIM_01109 2.2e-30 S Domain of unknown function (DUF1912)
PCMLNIIM_01110 4.4e-164 mmuM 1.5.1.20, 2.1.1.10 H Homocysteine
PCMLNIIM_01111 1.5e-250 mmuP E amino acid
PCMLNIIM_01112 3.9e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
PCMLNIIM_01113 2.6e-225 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PCMLNIIM_01114 9.7e-22
PCMLNIIM_01115 1.9e-89 folA 1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PCMLNIIM_01116 2.9e-167 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PCMLNIIM_01117 3.1e-212 mvaS 2.3.3.10 I synthase
PCMLNIIM_01118 8e-222 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PCMLNIIM_01119 1.9e-77 K hmm pf08876
PCMLNIIM_01120 5.2e-119 yqfA K protein, Hemolysin III
PCMLNIIM_01121 4.1e-29 pspC KT PspC domain protein
PCMLNIIM_01122 6.2e-30 K regulation of RNA biosynthetic process
PCMLNIIM_01123 2.8e-134 fasA KT Response regulator of the LytR AlgR family
PCMLNIIM_01124 4.7e-241 fasC 2.7.13.3 T protein histidine kinase activity
PCMLNIIM_01125 9.3e-210 hpk9 2.7.13.3 T protein histidine kinase activity
PCMLNIIM_01126 2.5e-153 hpk9 2.7.13.3 T protein histidine kinase activity
PCMLNIIM_01127 1.7e-230 2.7.13.3 T signal transduction protein with a C-terminal ATPase domain
PCMLNIIM_01128 1.8e-273 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PCMLNIIM_01129 0.0 amiA E ABC transporter, substrate-binding protein, family 5
PCMLNIIM_01130 1.4e-119 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PCMLNIIM_01131 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PCMLNIIM_01132 1.2e-50 S Protein of unknown function (DUF3397)
PCMLNIIM_01133 1.2e-85 cah 4.2.1.1 P Reversible hydration of carbon dioxide
PCMLNIIM_01134 1.6e-126 WQ51_05710 S Mitochondrial biogenesis AIM24
PCMLNIIM_01135 1.4e-226 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PCMLNIIM_01136 1.9e-73 3.5.1.19 Q hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
PCMLNIIM_01137 1.2e-79 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
PCMLNIIM_01138 6.3e-108 XK27_09620 S FMN reductase (NADPH) activity
PCMLNIIM_01139 7.9e-230 XK27_09615 C reductase
PCMLNIIM_01140 4.8e-140 fnt P Formate nitrite transporter
PCMLNIIM_01141 3.9e-96 XK27_08585 S Psort location CytoplasmicMembrane, score
PCMLNIIM_01142 3.7e-185 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PCMLNIIM_01143 6.1e-171 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PCMLNIIM_01144 5.4e-116 gluP 3.4.21.105 O membrane protein (homolog of Drosophila rhomboid)
PCMLNIIM_01145 1.3e-93 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PCMLNIIM_01146 2.3e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PCMLNIIM_01147 5.3e-58 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PCMLNIIM_01148 1.8e-141 S HAD hydrolase, family IA, variant
PCMLNIIM_01149 1.2e-160 rrmA 2.1.1.187 Q methyltransferase
PCMLNIIM_01153 3.9e-90 tadA 3.5.4.1, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PCMLNIIM_01154 3.3e-65 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PCMLNIIM_01155 8.3e-37 yeeD O sulfur carrier activity
PCMLNIIM_01156 5.8e-186 yeeE S Sulphur transport
PCMLNIIM_01157 1.1e-112 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PCMLNIIM_01158 1e-53 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PCMLNIIM_01159 3.5e-08 XK27_10305 S Domain of unknown function (DUF4651)
PCMLNIIM_01160 7.7e-202 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
PCMLNIIM_01161 1.4e-131 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PCMLNIIM_01162 3e-111 S CAAX amino terminal protease family protein
PCMLNIIM_01164 2.5e-110 V CAAX protease self-immunity
PCMLNIIM_01165 8.8e-27 lanR K sequence-specific DNA binding
PCMLNIIM_01166 2.9e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PCMLNIIM_01167 7.7e-177 ytxK 2.1.1.72 L DNA methylase
PCMLNIIM_01168 5.8e-12 comGF U Putative Competence protein ComGF
PCMLNIIM_01169 5.3e-72 comGF U Competence protein ComGF
PCMLNIIM_01170 3.1e-15 NU Type II secretory pathway pseudopilin
PCMLNIIM_01171 1.9e-69 cglD NU Competence protein
PCMLNIIM_01172 2.2e-43 comGC U Required for transformation and DNA binding
PCMLNIIM_01173 7e-142 cglB U protein transport across the cell outer membrane
PCMLNIIM_01174 2.4e-175 comGA NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
PCMLNIIM_01175 1e-68 S cog cog4699
PCMLNIIM_01176 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PCMLNIIM_01177 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PCMLNIIM_01178 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PCMLNIIM_01179 1.9e-239 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PCMLNIIM_01180 9.1e-60 K sequence-specific DNA binding
PCMLNIIM_01181 7.7e-09
PCMLNIIM_01183 0.0 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
PCMLNIIM_01184 4.3e-138 agrA KT response regulator
PCMLNIIM_01185 3.1e-07
PCMLNIIM_01186 5.6e-135 agrA KT response regulator
PCMLNIIM_01187 2e-231 2.7.13.3 T GHKL domain
PCMLNIIM_01189 0.0 vanY 3.4.17.14, 3.5.1.28 M D-alanyl-D-alanine carboxypeptidase
PCMLNIIM_01190 1.3e-142 cnhA 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
PCMLNIIM_01191 2.9e-226 mtnE 2.6.1.83 E mutations do not affect methionine salvage in vivo however
PCMLNIIM_01192 5.9e-191 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PCMLNIIM_01193 1.3e-218 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PCMLNIIM_01194 5.6e-127 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
PCMLNIIM_01195 1.2e-205 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
PCMLNIIM_01196 1.6e-128 yxkH G deacetylase
PCMLNIIM_01197 6.8e-237 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
PCMLNIIM_01198 3.1e-153 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PCMLNIIM_01199 7e-148 rarD S Transporter
PCMLNIIM_01200 7.5e-16 T peptidase
PCMLNIIM_01201 3e-14 coiA 3.6.4.12 S Competence protein
PCMLNIIM_01202 1.3e-107 S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PCMLNIIM_01203 5e-107 rimL 2.3.1.128, 5.2.1.8 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PCMLNIIM_01204 5.7e-172 S Helix-hairpin-helix DNA-binding motif class 1
PCMLNIIM_01205 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PCMLNIIM_01206 0.0 T Nacht domain
PCMLNIIM_01207 3.5e-214 dcm 2.1.1.37 H C-5 cytosine-specific DNA methylase
PCMLNIIM_01208 6.3e-293
PCMLNIIM_01209 3.5e-56 lrgA S Effector of murein hydrolase LrgA
PCMLNIIM_01210 3.2e-116 lrgB M Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgA, with the holin-like proteins CidA and or CidB. The LrgAB and CidAB proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses
PCMLNIIM_01211 7.9e-97 3.1.3.18 S IA, variant 1
PCMLNIIM_01212 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PCMLNIIM_01213 6e-305 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PCMLNIIM_01214 2.2e-114 serB 3.1.3.3 E phosphoserine phosphatase
PCMLNIIM_01215 1e-204 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PCMLNIIM_01216 1.5e-228 cinA 3.5.1.42 S Belongs to the CinA family
PCMLNIIM_01217 2.2e-107 tag 3.2.2.20 L 3-methyladenine DNA glycosylase
PCMLNIIM_01218 2e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PCMLNIIM_01220 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PCMLNIIM_01222 2.4e-69 K LytTr DNA-binding domain
PCMLNIIM_01223 1.9e-77 S Protein of unknown function (DUF3021)
PCMLNIIM_01224 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PCMLNIIM_01225 1.9e-56 ymcA 3.6.3.21 S Belongs to the UPF0342 family
PCMLNIIM_01226 3.1e-69 argR K Regulates arginine biosynthesis genes
PCMLNIIM_01227 0.0 argS 6.1.1.19 J Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
PCMLNIIM_01228 9.6e-247 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PCMLNIIM_01230 2.9e-36
PCMLNIIM_01231 3.2e-11
PCMLNIIM_01232 7.9e-174 1.1.1.169 H Ketopantoate reductase
PCMLNIIM_01233 3.3e-200 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PCMLNIIM_01234 9e-81 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PCMLNIIM_01235 6.1e-238 purD 6.3.4.13 F Belongs to the GARS family
PCMLNIIM_01236 2.8e-293 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PCMLNIIM_01237 6.8e-101 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PCMLNIIM_01238 3.2e-189 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PCMLNIIM_01239 1.2e-277 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PCMLNIIM_01240 2.3e-188
PCMLNIIM_01241 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PCMLNIIM_01242 8.9e-130 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PCMLNIIM_01243 8.1e-30 acpP1 IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PCMLNIIM_01244 2.1e-180 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PCMLNIIM_01245 1.4e-139 recO L Involved in DNA repair and RecF pathway recombination
PCMLNIIM_01246 1.1e-217 araT 2.6.1.1 E Aminotransferase
PCMLNIIM_01247 9.5e-175 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PCMLNIIM_01248 9.5e-91 usp 3.5.1.28 CBM50 S CHAP domain
PCMLNIIM_01249 1.9e-84 mreD M rod shape-determining protein MreD
PCMLNIIM_01250 1.2e-106 mreC M Involved in formation and maintenance of cell shape
PCMLNIIM_01256 6e-143 S Macro domain protein
PCMLNIIM_01257 6.3e-51 trxA O Belongs to the thioredoxin family
PCMLNIIM_01258 2.5e-74 yccU S CoA-binding protein
PCMLNIIM_01259 6.6e-145 tatD L Hydrolase, tatd
PCMLNIIM_01260 2.9e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PCMLNIIM_01261 3.1e-156 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PCMLNIIM_01263 4e-164 rsgA 3.1.3.100 G One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PCMLNIIM_01264 7.8e-120 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PCMLNIIM_01265 1.1e-118 thiN 2.7.6.2 H thiamine pyrophosphokinase
PCMLNIIM_01266 1.4e-170 rmuC S RmuC domain protein
PCMLNIIM_01267 1.2e-177 cbf S 3'-5' exoribonuclease yhaM
PCMLNIIM_01268 4e-142 purR 2.4.2.7 F operon repressor
PCMLNIIM_01269 2.3e-69 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PCMLNIIM_01270 3.9e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PCMLNIIM_01271 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PCMLNIIM_01272 6.2e-185 gap 1.2.1.12 C Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PCMLNIIM_01273 2.1e-123
PCMLNIIM_01274 5.8e-222 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PCMLNIIM_01275 3e-87 S Fusaric acid resistance protein-like
PCMLNIIM_01276 2.5e-62 glnR K Transcriptional regulator
PCMLNIIM_01277 5.2e-264 glnA 6.3.1.2 E glutamine synthetase
PCMLNIIM_01278 1.4e-113 pscB M CHAP domain protein
PCMLNIIM_01279 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PCMLNIIM_01280 1.5e-33 ykzG S Belongs to the UPF0356 family
PCMLNIIM_01281 1.6e-115 yeaZ 2.3.1.234 O COG1214, inactive homolog of metal-dependent proteases
PCMLNIIM_01282 2e-71 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PCMLNIIM_01283 3.3e-186 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PCMLNIIM_01284 3e-114 azlC E AzlC protein
PCMLNIIM_01285 3.7e-46 azlD S branched-chain amino acid
PCMLNIIM_01286 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PCMLNIIM_01287 1.1e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PCMLNIIM_01288 1.3e-154 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PCMLNIIM_01289 9.3e-15 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PCMLNIIM_01290 6.1e-94 cvpA S toxin biosynthetic process
PCMLNIIM_01291 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PCMLNIIM_01292 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PCMLNIIM_01295 4.3e-239 metY 2.5.1.49 E o-acetylhomoserine
PCMLNIIM_01296 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PCMLNIIM_01297 6.9e-240 agcS E (Alanine) symporter
PCMLNIIM_01298 1.2e-244 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PCMLNIIM_01299 1.1e-169 bglC K Transcriptional regulator
PCMLNIIM_01300 0.0 sasH 3.1.3.5, 3.6.1.45 F Belongs to the 5'-nucleotidase family
PCMLNIIM_01301 6.4e-82 yecS P ABC transporter (Permease
PCMLNIIM_01302 3.9e-148 yckB ET Belongs to the bacterial solute-binding protein 3 family
PCMLNIIM_01303 1.1e-240 nylA 3.5.1.4 J Belongs to the amidase family
PCMLNIIM_01304 4.4e-112 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PCMLNIIM_01305 4.5e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PCMLNIIM_01306 4.5e-177 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PCMLNIIM_01307 3.5e-146 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
PCMLNIIM_01308 1.2e-94 thiJ 2.7.11.1, 3.5.1.124 S DJ-1 family
PCMLNIIM_01309 1e-142 S TraX protein
PCMLNIIM_01310 5.1e-309 FbpA K RNA-binding protein homologous to eukaryotic snRNP
PCMLNIIM_01311 4.3e-270 S Psort location CytoplasmicMembrane, score
PCMLNIIM_01312 9.6e-234 dinF V Mate efflux family protein
PCMLNIIM_01313 1.8e-181 yclQ P ABC-type enterochelin transport system, periplasmic component
PCMLNIIM_01314 1.4e-150 S von Willebrand factor (vWF) type A domain
PCMLNIIM_01315 8.3e-111 gph 3.1.3.18 S HAD hydrolase, family IA, variant 1
PCMLNIIM_01316 3.3e-42 2.4.2.3 F Phosphorylase superfamily
PCMLNIIM_01317 1.5e-186 adhB 1.1.1.1, 1.1.1.14 E Zinc-binding dehydrogenase
PCMLNIIM_01318 1.9e-195 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
PCMLNIIM_01319 3.3e-153 czcD P cation diffusion facilitator family transporter
PCMLNIIM_01320 2.9e-96 K Transcriptional regulator, TetR family
PCMLNIIM_01321 1e-68 S Protein of unknown function with HXXEE motif
PCMLNIIM_01322 9.8e-13
PCMLNIIM_01323 2.5e-32 pnuC H nicotinamide mononucleotide transporter
PCMLNIIM_01324 6e-76 tnp L DDE domain
PCMLNIIM_01325 4.1e-207 murM 2.3.2.10, 2.3.2.16 V protein involved in methicillin resistance
PCMLNIIM_01326 2e-146 yidA S hydrolases of the HAD superfamily
PCMLNIIM_01327 1.7e-159 XK27_00115 2.3.1.128 K Acetyltransferase GNAT family
PCMLNIIM_01328 3.2e-141 XK27_00120 2.4.2.3 F Phosphorylase superfamily
PCMLNIIM_01329 5.3e-68 ywiB S Domain of unknown function (DUF1934)
PCMLNIIM_01330 0.0 pacL 3.6.3.8 P cation transport ATPase
PCMLNIIM_01331 1.4e-133 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PCMLNIIM_01332 6.8e-153 yjjH S Calcineurin-like phosphoesterase
PCMLNIIM_01333 4.8e-199 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PCMLNIIM_01334 5.7e-183 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PCMLNIIM_01335 3.2e-124 ftsE D cell division ATP-binding protein FtsE
PCMLNIIM_01336 7.3e-164 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
PCMLNIIM_01337 1.9e-91 mutX 3.6.1.55 F NTP pyrophosphohydrolases including oxidative damage repair enzymes
PCMLNIIM_01338 4.3e-177 yubA S permease
PCMLNIIM_01339 8.3e-224 G COG0457 FOG TPR repeat
PCMLNIIM_01340 1.2e-97 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PCMLNIIM_01341 0.0 lytC 3.4.17.14, 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
PCMLNIIM_01342 1.4e-223 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PCMLNIIM_01343 1.5e-86 ebsA S Family of unknown function (DUF5322)
PCMLNIIM_01344 5.6e-17 M LysM domain
PCMLNIIM_01345 3.6e-120 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PCMLNIIM_01346 1e-85 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PCMLNIIM_01347 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PCMLNIIM_01348 1.5e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PCMLNIIM_01349 1.4e-86 XK27_03610 K Gnat family
PCMLNIIM_01350 4.9e-93 yybC
PCMLNIIM_01351 4.9e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PCMLNIIM_01352 3.3e-277 pepV 3.5.1.18 E Dipeptidase
PCMLNIIM_01353 3.1e-112 ung2 3.2.2.27 L Uracil-DNA glycosylase
PCMLNIIM_01354 2.9e-122 L Helix-turn-helix domain
PCMLNIIM_01355 3.7e-141 L Integrase core domain protein
PCMLNIIM_01356 1.6e-16
PCMLNIIM_01357 4.5e-55 cadC K Bacterial regulatory protein, arsR family
PCMLNIIM_01358 3.4e-101 cadD P cadmium resistance
PCMLNIIM_01360 6.7e-89 H Methyltransferase
PCMLNIIM_01361 1.7e-89 S Protein conserved in bacteria
PCMLNIIM_01362 7.3e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
PCMLNIIM_01363 2e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PCMLNIIM_01364 5.1e-22 K Transcriptional
PCMLNIIM_01366 4.1e-153 degV S DegV family
PCMLNIIM_01367 2.7e-91 yacP S RNA-binding protein containing a PIN domain
PCMLNIIM_01368 9.7e-135 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PCMLNIIM_01370 2.7e-67 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PCMLNIIM_01371 8.1e-257 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PCMLNIIM_01373 3.3e-112 cysE 2.3.1.30 E serine acetyltransferase
PCMLNIIM_01374 1e-139 S SseB protein N-terminal domain
PCMLNIIM_01375 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PCMLNIIM_01376 1.1e-228 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PCMLNIIM_01377 2e-233 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PCMLNIIM_01378 0.0 clpC O Belongs to the ClpA ClpB family
PCMLNIIM_01379 4.8e-76 ctsR K Belongs to the CtsR family
PCMLNIIM_01380 1.2e-82 S Putative small multi-drug export protein
PCMLNIIM_01381 1e-182 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PCMLNIIM_01382 7.4e-138 rpsB J Belongs to the universal ribosomal protein uS2 family
PCMLNIIM_01383 1.1e-106 ahpC 1.11.1.15 O alkyl hydroperoxide reductase
PCMLNIIM_01384 3.5e-288 ahpF O alkyl hydroperoxide reductase
PCMLNIIM_01386 8.2e-165 fba 4.1.2.13, 4.1.2.29 G aldolase
PCMLNIIM_01389 2.2e-94 ywlG S Belongs to the UPF0340 family
PCMLNIIM_01390 6e-126 treR K trehalose operon
PCMLNIIM_01391 0.0 treB 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
PCMLNIIM_01392 0.0 treC 3.2.1.93 GH13 G COG0366 Glycosidases
PCMLNIIM_01393 0.0 pepO 3.4.24.71 O Peptidase family M13
PCMLNIIM_01394 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PCMLNIIM_01397 1.3e-276 thrC 4.2.3.1 E Threonine synthase
PCMLNIIM_01398 7.1e-226 norN V Mate efflux family protein
PCMLNIIM_01399 1.4e-57 asp S cog cog1302
PCMLNIIM_01400 3.8e-304 yloV S kinase related to dihydroxyacetone kinase
PCMLNIIM_01401 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
PCMLNIIM_01402 0.0 ilvB 2.2.1.6 EH Acetolactate synthase
PCMLNIIM_01403 2.2e-76 ilvN 2.2.1.6 E Acetolactate synthase
PCMLNIIM_01404 3e-195 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PCMLNIIM_01405 1.8e-273 L Transposase
PCMLNIIM_01406 7e-12 S Accessory secretory protein Sec, Asp5
PCMLNIIM_01407 3.9e-13 S Accessory secretory protein Sec Asp4
PCMLNIIM_01408 0.0 secA2 U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PCMLNIIM_01409 1.6e-68 asp3 S Accessory Sec system protein Asp3
PCMLNIIM_01410 9.4e-302 asp2 3.4.11.5 S Accessory Sec system protein Asp2
PCMLNIIM_01411 2.8e-309 asp1 S Accessory Sec system protein Asp1
PCMLNIIM_01412 2.3e-165 secY2 U Part of the accessory SecA2 SecY2 system specifically required for export of
PCMLNIIM_01413 6.4e-240 M family 8
PCMLNIIM_01414 0.0 M cog cog1442
PCMLNIIM_01415 1.5e-166 cpsJ M Glycosyltransferase group 2 family protein
PCMLNIIM_01416 4.6e-235 M Glycosyltransferase, family 8
PCMLNIIM_01417 1.3e-185 nss M transferase activity, transferring glycosyl groups
PCMLNIIM_01418 4e-194 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
PCMLNIIM_01419 7.6e-288 tagE 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
PCMLNIIM_01420 6.2e-240 M Glycosyltransferase, family 8
PCMLNIIM_01421 1e-146 epsH S acetyltransferase'
PCMLNIIM_01422 0.0 M family 8
PCMLNIIM_01423 3.4e-155 cat 2.3.1.28 S acetyltransferase'
PCMLNIIM_01424 4.4e-211 int2 L Phage integrase family
PCMLNIIM_01425 1.6e-55 S Domain of unknown function (DUF771)
PCMLNIIM_01426 1.7e-215 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PCMLNIIM_01427 1.7e-137
PCMLNIIM_01429 5.5e-250 ydaM M Glycosyltransferases, probably involved in cell wall biogenesis
PCMLNIIM_01430 2e-208 G Belongs to the glycosyl hydrolase 8 (cellulase D) family
PCMLNIIM_01432 2e-233 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PCMLNIIM_01433 7.2e-26 epuA S DNA-directed RNA polymerase subunit beta
PCMLNIIM_01434 8.5e-154 endA F DNA RNA non-specific endonuclease
PCMLNIIM_01435 2.9e-111 tcyB_2 P ABC transporter (permease)
PCMLNIIM_01436 1.9e-116 gltJ P ABC transporter (Permease
PCMLNIIM_01437 6.1e-146 peb1A ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
PCMLNIIM_01438 2.7e-140 glnQ 3.6.3.21 E abc transporter atp-binding protein
PCMLNIIM_01439 3.8e-128 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCMLNIIM_01440 1e-235 vicK 2.7.13.3 T Histidine kinase
PCMLNIIM_01441 4.6e-154 vicX 3.1.26.11 S Metal-dependent hydrolases of the beta-lactamase superfamily I
PCMLNIIM_01442 1.5e-56 S Protein of unknown function (DUF454)
PCMLNIIM_01443 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PCMLNIIM_01444 3.8e-82 comFC K competence protein
PCMLNIIM_01445 1e-243 comFA L Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
PCMLNIIM_01446 2e-109 yvyE 3.4.13.9 S YigZ family
PCMLNIIM_01447 8.3e-168 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PCMLNIIM_01448 5.1e-111 acuB S CBS domain
PCMLNIIM_01449 1.6e-123 livF E COG0410 ABC-type branched-chain amino acid transport systems, ATPase component
PCMLNIIM_01450 3.1e-136 livG E COG0411 ABC-type branched-chain amino acid transport systems, ATPase component
PCMLNIIM_01451 4.9e-139 livM E Belongs to the binding-protein-dependent transport system permease family
PCMLNIIM_01452 4.2e-145 livH E Belongs to the binding-protein-dependent transport system permease family
PCMLNIIM_01453 2.8e-213 livJ E COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component
PCMLNIIM_01454 1.9e-46 ylbG S UPF0298 protein
PCMLNIIM_01455 3e-72 ylbF S Belongs to the UPF0342 family
PCMLNIIM_01456 3.7e-105 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PCMLNIIM_01457 5.7e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PCMLNIIM_01458 0.0 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 G Belongs to the glycosyl hydrolase 68 family
PCMLNIIM_01459 0.0 3.2.1.26, 3.2.1.65 GH32 G Belongs to the glycosyl hydrolase 32 family
PCMLNIIM_01460 1.5e-80 hmpT S cog cog4720
PCMLNIIM_01461 7.3e-138 thiD 2.7.1.35, 2.7.1.49, 2.7.4.7 H phosphomethylpyrimidine kinase
PCMLNIIM_01462 1.7e-139 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PCMLNIIM_01463 8e-189 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PCMLNIIM_01464 6e-303 dnaK O Heat shock 70 kDa protein
PCMLNIIM_01465 7e-63 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PCMLNIIM_01466 1.1e-184 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PCMLNIIM_01467 3.2e-101 acmA 3.2.1.17, 3.4.17.14, 3.5.1.28 NU Muramidase (Flagellum-specific)
PCMLNIIM_01468 2.3e-142 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
PCMLNIIM_01469 5.6e-132 ais G Phosphoglycerate mutase
PCMLNIIM_01470 2.3e-243 XK27_08635 S UPF0210 protein
PCMLNIIM_01471 6.1e-39 gcvR T UPF0237 protein
PCMLNIIM_01472 3.9e-234 capA M Bacterial capsule synthesis protein
PCMLNIIM_01473 8.5e-140 srtB 3.4.22.70 S sortase, SrtB family
PCMLNIIM_01474 6e-85
PCMLNIIM_01475 1.5e-29 K Helix-turn-helix domain
PCMLNIIM_01476 2.6e-18
PCMLNIIM_01478 5.9e-88 sigH K DNA-templated transcription, initiation
PCMLNIIM_01479 2.8e-140 ykuT M mechanosensitive ion channel
PCMLNIIM_01480 5.2e-229 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PCMLNIIM_01481 1.3e-70 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PCMLNIIM_01482 2.7e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PCMLNIIM_01483 7.1e-83 XK27_03960 S Protein of unknown function (DUF3013)
PCMLNIIM_01484 2.4e-75 mutT3 3.6.1.13, 3.6.1.55 L NUDIX domain
PCMLNIIM_01485 7.7e-177 prmA J Ribosomal protein L11 methyltransferase
PCMLNIIM_01486 3.1e-133 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PCMLNIIM_01487 0.0 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PCMLNIIM_01488 1.2e-82 nrdI F Belongs to the NrdI family
PCMLNIIM_01489 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PCMLNIIM_01490 2.2e-73 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PCMLNIIM_01491 2e-49 L transposition
PCMLNIIM_01492 1.3e-55 insK L Integrase core domain protein
PCMLNIIM_01493 7.3e-163 S CHAP domain
PCMLNIIM_01494 1.7e-308 S Glucan-binding protein C
PCMLNIIM_01495 2.7e-105 S CAAX amino terminal protease family protein
PCMLNIIM_01496 6.1e-168 K transcriptional regulator (lysR family)
PCMLNIIM_01497 2.2e-159 S reductase
PCMLNIIM_01498 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PCMLNIIM_01503 4e-127 S Belongs to the UPF0255 family
PCMLNIIM_01504 6.1e-199 S Protein of unknown function (DUF3114)
PCMLNIIM_01505 1.7e-160 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
PCMLNIIM_01506 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PCMLNIIM_01507 2.8e-246 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
PCMLNIIM_01508 2.6e-191 dgs 2.4.1.208 GT4 M Glycosyltransferase, group 1 family protein
PCMLNIIM_01509 0.0 U protein secretion
PCMLNIIM_01510 3.5e-185 coiA 3.6.4.12 S Competence protein
PCMLNIIM_01511 0.0 pepF E oligoendopeptidase F
PCMLNIIM_01512 6.7e-218 oxlT P COG0477 Permeases of the major facilitator superfamily
PCMLNIIM_01513 1.9e-127 yrrM 2.1.1.104 S O-Methyltransferase
PCMLNIIM_01514 3e-167 prsA 3.1.3.16, 5.2.1.8 O peptidyl-prolyl cis-trans isomerase activity
PCMLNIIM_01515 3.3e-83 yxjI S LURP-one-related
PCMLNIIM_01516 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PCMLNIIM_01517 7.4e-60 L thioesterase
PCMLNIIM_01518 2.6e-55 bta 1.8.1.8 CO cell redox homeostasis
PCMLNIIM_01520 3.8e-182 L the current gene model (or a revised gene model) may contain a
PCMLNIIM_01521 1.4e-228 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PCMLNIIM_01522 1.6e-263 argH 4.3.2.1 E Argininosuccinate lyase
PCMLNIIM_01523 3.8e-54 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PCMLNIIM_01524 9.7e-147 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PCMLNIIM_01525 8.8e-150 jag S RNA-binding protein
PCMLNIIM_01526 1.5e-106 K Transcriptional regulator
PCMLNIIM_01527 1.5e-103 1.6.5.2 S NADPH-quinone reductase (modulator of drug activity B)
PCMLNIIM_01528 3.4e-14 rpmH J Ribosomal protein L34
PCMLNIIM_01529 2.8e-226 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PCMLNIIM_01530 1.5e-97 V CAAX protease self-immunity
PCMLNIIM_01531 6e-140 cppA E CppA N-terminal
PCMLNIIM_01532 9.7e-172 ampC V COG1680 Beta-lactamase class C and other penicillin binding proteins
PCMLNIIM_01534 4.8e-76 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PCMLNIIM_01535 4.7e-148 cah 4.2.1.1 P carbonic anhydrase
PCMLNIIM_01536 0.0 lai 4.2.1.53 S Myosin-crossreactive antigen
PCMLNIIM_01538 0.0 pflB 2.3.1.54 C formate acetyltransferase'
PCMLNIIM_01539 9.5e-203 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PCMLNIIM_01540 2.8e-35
PCMLNIIM_01541 4.8e-151 yxeM ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
PCMLNIIM_01542 5.2e-162 yxeN P ABC transporter (Permease
PCMLNIIM_01543 5.5e-130 tcyN 3.6.3.21 E abc transporter atp-binding protein
PCMLNIIM_01544 5e-10 S Protein of unknown function (DUF4059)
PCMLNIIM_01545 2.1e-171 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PCMLNIIM_01546 5.5e-104 rsmD 2.1.1.171 L Methyltransferase
PCMLNIIM_01547 5e-87 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PCMLNIIM_01548 4.2e-187 ylbL T Belongs to the peptidase S16 family
PCMLNIIM_01549 5.4e-183 yhcC S radical SAM protein
PCMLNIIM_01550 1.7e-96 ytqB J (SAM)-dependent
PCMLNIIM_01552 0.0 yjcE P NhaP-type Na H and K H antiporters
PCMLNIIM_01553 2.1e-143 modF 3.6.3.21, 3.6.3.34 P abc transporter atp-binding protein
PCMLNIIM_01554 3.8e-238 hlyX S COG1253 Hemolysins and related proteins containing CBS domains
PCMLNIIM_01555 1.4e-07 MU outer membrane autotransporter barrel domain protein
PCMLNIIM_01556 1.5e-157 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PCMLNIIM_01558 9e-75 XK27_03180 T universal stress protein
PCMLNIIM_01559 6.9e-239 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase
PCMLNIIM_01560 2.4e-139 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
PCMLNIIM_01561 1.7e-99 pncA Q isochorismatase
PCMLNIIM_01562 6.7e-148 hlpA M Belongs to the NlpA lipoprotein family
PCMLNIIM_01563 1e-90 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PCMLNIIM_01564 1.5e-293 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PCMLNIIM_01565 1.1e-56 tagE 2.4.1.52 GT4 M transferase activity, transferring glycosyl groups
PCMLNIIM_01566 1.4e-47 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PCMLNIIM_01567 2.2e-271 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PCMLNIIM_01568 1e-273 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PCMLNIIM_01569 1.6e-64
PCMLNIIM_01570 2.6e-153 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PCMLNIIM_01571 1.4e-98 yqeG S hydrolase of the HAD superfamily
PCMLNIIM_01572 6e-213 yqeH S in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
PCMLNIIM_01573 1.1e-48 yhbY J RNA-binding protein
PCMLNIIM_01574 1.2e-117 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PCMLNIIM_01575 1e-107 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
PCMLNIIM_01576 2e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PCMLNIIM_01577 1.3e-139 yqeM Q Methyltransferase domain protein
PCMLNIIM_01578 9.1e-198 ylbM S Belongs to the UPF0348 family
PCMLNIIM_01579 0.0 2.1.1.72 V type I restriction-modification system
PCMLNIIM_01580 1.7e-70 3.1.21.3 V Type I restriction modification DNA specificity domain
PCMLNIIM_01581 3.6e-175
PCMLNIIM_01582 1e-244 D nuclear chromosome segregation
PCMLNIIM_01583 0.0 hsdR 3.1.21.3 L COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases
PCMLNIIM_01584 3.4e-39 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PCMLNIIM_01585 1.6e-44 yoeB S Addiction module toxin, Txe YoeB family
PCMLNIIM_01587 0.0 clpL O ATP-dependent Clp protease ATP-binding subunit
PCMLNIIM_01589 1.6e-103
PCMLNIIM_01591 9.7e-09
PCMLNIIM_01592 3.9e-72 hit FG Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
PCMLNIIM_01593 1.4e-130 ecsA V abc transporter atp-binding protein
PCMLNIIM_01594 1.9e-176 ecsB U Bacterial ABC transporter protein EcsB
PCMLNIIM_01595 7.1e-152 ytmP 2.7.1.89 M Phosphotransferase
PCMLNIIM_01596 9e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PCMLNIIM_01598 8.8e-223 ytfP S Flavoprotein
PCMLNIIM_01599 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
PCMLNIIM_01600 2.1e-63 XK27_02560 S cog cog2151
PCMLNIIM_01601 9.1e-42 WQ51_02910 S Protein of unknown function, DUF536
PCMLNIIM_01602 2.9e-105 dnaQ 2.7.7.7 L DNA polymerase III
PCMLNIIM_01603 2.7e-129 K transcriptional regulator, MerR family
PCMLNIIM_01604 0.0 V ABC transporter (Permease
PCMLNIIM_01605 3.9e-125 V abc transporter atp-binding protein
PCMLNIIM_01607 1.2e-43 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PCMLNIIM_01608 4e-47
PCMLNIIM_01609 0.0 ctpE P E1-E2 ATPase
PCMLNIIM_01610 2.9e-58
PCMLNIIM_01611 5.5e-19 S Bacteriocin (Lactococcin_972)
PCMLNIIM_01612 0.0 S bacteriocin-associated integral membrane protein
PCMLNIIM_01613 3.5e-120 yujD V ABC transporter
PCMLNIIM_01614 1.5e-40 pchB 2.5.1.19, 4.2.1.10, 4.2.99.21, 5.4.99.5 E Chorismate mutase
PCMLNIIM_01615 3.1e-256 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PCMLNIIM_01616 2.7e-105 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH anthranilate
PCMLNIIM_01617 3.9e-179 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PCMLNIIM_01618 1.6e-132 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
PCMLNIIM_01619 1.8e-99 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E belongs to the TrpF family
PCMLNIIM_01620 3.4e-230 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PCMLNIIM_01621 2.3e-142 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PCMLNIIM_01623 5.2e-175 EGP Major facilitator Superfamily
PCMLNIIM_01624 1e-72 copY K negative regulation of transcription, DNA-templated
PCMLNIIM_01625 0.0 copA 3.6.3.54 P P-type ATPase
PCMLNIIM_01626 2.7e-31 copZ 2.7.7.77 P Heavy metal-associated domain protein
PCMLNIIM_01627 1.6e-191 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PCMLNIIM_01628 3e-114 papP P ABC transporter (Permease
PCMLNIIM_01629 3e-106 P ABC transporter (Permease
PCMLNIIM_01630 1.5e-135 glnQ 3.6.3.21 E abc transporter atp-binding protein
PCMLNIIM_01631 8.8e-156 cjaA ET ABC transporter substrate-binding protein
PCMLNIIM_01632 6.6e-254 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PCMLNIIM_01633 2.1e-117 ywaF S Integral membrane protein (intg_mem_TP0381)
PCMLNIIM_01634 6.8e-300 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PCMLNIIM_01635 5.7e-173 yjbB G Permeases of the major facilitator superfamily
PCMLNIIM_01636 3.3e-158 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
PCMLNIIM_01637 7.8e-100 thiT S Thiamine transporter
PCMLNIIM_01638 2.5e-62 yjqA S Bacterial PH domain
PCMLNIIM_01639 7.4e-153 corA P CorA-like protein
PCMLNIIM_01640 2.2e-245 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PCMLNIIM_01641 7e-43 yazA L endonuclease containing a URI domain
PCMLNIIM_01642 5.5e-141 yabB 2.1.1.223 L Methyltransferase
PCMLNIIM_01643 1.2e-156 nodB3 G deacetylase
PCMLNIIM_01644 9.8e-143 plsC 2.3.1.51 I Acyltransferase
PCMLNIIM_01645 1.2e-94 comEA L COG1555 DNA uptake protein and related DNA-binding proteins
PCMLNIIM_01646 0.0 comEC S Competence protein ComEC
PCMLNIIM_01647 1e-232 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PCMLNIIM_01648 3.7e-99 XK27_07830 2.3.1.128 J Acetyltransferase GNAT Family
PCMLNIIM_01649 1.1e-231 ytoI K transcriptional regulator containing CBS domains
PCMLNIIM_01650 1.1e-166 map 3.4.11.18 E Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed
PCMLNIIM_01651 3.7e-163 rbn E Belongs to the UPF0761 family
PCMLNIIM_01652 1.7e-85 ccl S cog cog4708
PCMLNIIM_01653 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PCMLNIIM_01654 2.1e-185 yegS 2.7.1.107 I Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
PCMLNIIM_01656 1e-171 yfjR K regulation of single-species biofilm formation
PCMLNIIM_01658 2.2e-71 S QueT transporter
PCMLNIIM_01659 1.3e-156 xth 3.1.11.2 L exodeoxyribonuclease III
PCMLNIIM_01661 1.6e-196 XK27_00915 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PCMLNIIM_01662 2.9e-17 yjdB S Domain of unknown function (DUF4767)
PCMLNIIM_01663 1.5e-166 tehB 2.1.1.265 PQ tellurite resistance protein tehb
PCMLNIIM_01664 2.8e-190 O protein import
PCMLNIIM_01665 2.7e-129 agrA KT phosphorelay signal transduction system
PCMLNIIM_01666 2.3e-197 2.7.13.3 T GHKL domain
PCMLNIIM_01668 2.4e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PCMLNIIM_01669 1.5e-36 ylqC L Belongs to the UPF0109 family
PCMLNIIM_01670 7.9e-238 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PCMLNIIM_01671 0.0 ydaO E amino acid
PCMLNIIM_01672 7.7e-100 folE 3.5.4.16 F gtp cyclohydrolase
PCMLNIIM_01673 1.6e-146 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PCMLNIIM_01674 2.1e-290 amy 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
PCMLNIIM_01675 4.5e-61 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PCMLNIIM_01676 4.1e-81 folK 2.7.6.3, 4.1.2.25 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
PCMLNIIM_01677 9.5e-169 murB 1.3.1.98 M cell wall formation
PCMLNIIM_01678 5.2e-212 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PCMLNIIM_01679 4.1e-139 potB P ABC-type spermidine putrescine transport system, permease component I
PCMLNIIM_01680 4.7e-132 potC P ABC-type spermidine putrescine transport system, permease component II
PCMLNIIM_01681 2.8e-204 potD P spermidine putrescine ABC transporter
PCMLNIIM_01682 1.9e-145 XK27_08050 O HflC and HflK could regulate a protease
PCMLNIIM_01683 1.8e-71 gloA 4.4.1.5 E Lactoylglutathione lyase
PCMLNIIM_01684 5.5e-161 GK ROK family
PCMLNIIM_01685 3.9e-209 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PCMLNIIM_01686 1e-104 wecD M Acetyltransferase (GNAT) domain
PCMLNIIM_01687 7.4e-222 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PCMLNIIM_01688 2e-72 ogt 2.1.1.63, 3.2.2.20 L methylated-DNA-[protein]-cysteine S-methyltransferase activity
PCMLNIIM_01689 1e-57 arsC 1.20.4.1 P Belongs to the ArsC family
PCMLNIIM_01691 1e-132 femA 2.3.2.10, 2.3.2.16 V FemAB family
PCMLNIIM_01692 7.4e-45 femA 2.3.2.10, 2.3.2.16 V FemAB family
PCMLNIIM_01693 2.4e-16 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PCMLNIIM_01694 9e-122 atpB C it plays a direct role in the translocation of protons across the membrane
PCMLNIIM_01695 1.6e-77 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PCMLNIIM_01696 1e-85 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PCMLNIIM_01698 4.7e-64 L Transposase (IS116 IS110 IS902 family)
PCMLNIIM_01699 8.9e-60 L PFAM transposase IS116 IS110 IS902 family
PCMLNIIM_01701 8e-94 S reductase
PCMLNIIM_01702 1.1e-71 badR K Transcriptional regulator, marr family
PCMLNIIM_01703 1.2e-35 XK27_02060 S Transglycosylase associated protein
PCMLNIIM_01704 1.1e-236 pepS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
PCMLNIIM_01705 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PCMLNIIM_01710 1.9e-07
PCMLNIIM_01713 2.6e-10
PCMLNIIM_01717 3.9e-66 spxA_2 1.20.4.1 P Belongs to the ArsC family
PCMLNIIM_01718 2.2e-279 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PCMLNIIM_01719 1.1e-156 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PCMLNIIM_01720 7.9e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PCMLNIIM_01721 2.6e-68 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PCMLNIIM_01722 1.5e-215 ftsW D Belongs to the SEDS family
PCMLNIIM_01723 1.6e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PCMLNIIM_01724 9.1e-147 cbiO2 P ABC transporter, ATP-binding protein
PCMLNIIM_01725 1e-156 P abc transporter atp-binding protein
PCMLNIIM_01726 1.4e-131 cbiQ P cobalt transport
PCMLNIIM_01727 9.7e-93 2.7.7.65 T Psort location CytoplasmicMembrane, score
PCMLNIIM_01728 4.5e-138 S Phenazine biosynthesis protein
PCMLNIIM_01729 9.7e-92 tetR K transcriptional regulator
PCMLNIIM_01730 9.5e-124 V abc transporter atp-binding protein
PCMLNIIM_01731 0.0 V ABC transporter (Permease
PCMLNIIM_01732 3.8e-185 P AAA domain, putative AbiEii toxin, Type IV TA system
PCMLNIIM_01733 2.4e-87 P cobalt transport protein
PCMLNIIM_01734 1.8e-80 S Hypothetical bacterial integral membrane protein (Trep_Strep)
PCMLNIIM_01735 5.5e-266 ndvA 3.6.3.25 P ABC transporter transmembrane region
PCMLNIIM_01736 1.9e-266 P ABC transporter transmembrane region
PCMLNIIM_01737 5.2e-70 K Bacterial regulatory proteins, tetR family
PCMLNIIM_01738 1.8e-17 L Transposase
PCMLNIIM_01739 1.8e-152 L Transposase
PCMLNIIM_01740 8.8e-97 K Bacterial regulatory proteins, tetR family
PCMLNIIM_01741 3.9e-161 ybhR V ABC transporter
PCMLNIIM_01742 1.1e-119 ybhF_2 V abc transporter atp-binding protein
PCMLNIIM_01743 4.4e-237 proWX P ABC transporter
PCMLNIIM_01744 3.7e-123 proV E abc transporter atp-binding protein
PCMLNIIM_01745 4.8e-146 1.6.5.2 GM epimerase
PCMLNIIM_01746 2.3e-67 mgrA K Transcriptional regulator, MarR family
PCMLNIIM_01747 5.6e-77 S Macro domain
PCMLNIIM_01748 6.6e-34 K COG COG0846 NAD-dependent protein deacetylases, SIR2 family
PCMLNIIM_01749 8.5e-40 K COG COG0846 NAD-dependent protein deacetylases, SIR2 family
PCMLNIIM_01750 1.2e-41 C Pyridoxamine 5'-phosphate oxidase
PCMLNIIM_01751 3e-133 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
PCMLNIIM_01752 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
PCMLNIIM_01755 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PCMLNIIM_01757 1e-20 L the current gene model (or a revised gene model) may contain a frame shift
PCMLNIIM_01758 4e-130 deoD 2.4.2.1, 2.4.2.28 F purine nucleoside phosphorylase
PCMLNIIM_01759 3e-133 yfeJ 6.3.5.2 F glutamine amidotransferase
PCMLNIIM_01760 2.6e-177 clcA_2 P Chloride transporter, ClC family
PCMLNIIM_01761 2.6e-149 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
PCMLNIIM_01762 8.5e-96 S Protein of unknown function (DUF1697)
PCMLNIIM_01763 6.1e-232 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
PCMLNIIM_01764 1.5e-121 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PCMLNIIM_01765 2.8e-252 V Glucan-binding protein C
PCMLNIIM_01766 1.8e-50 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
PCMLNIIM_01767 2.7e-224 XK27_05470 E Methionine synthase
PCMLNIIM_01768 1.1e-258 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PCMLNIIM_01769 4.7e-236 T PhoQ Sensor
PCMLNIIM_01770 1.5e-118 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCMLNIIM_01771 1.7e-148 S TraX protein
PCMLNIIM_01773 1.3e-51 V ABC-2 family transporter protein
PCMLNIIM_01774 2.3e-82 mutF V AAA domain, putative AbiEii toxin, Type IV TA system
PCMLNIIM_01775 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PCMLNIIM_01776 2.5e-155 dprA LU DNA protecting protein DprA
PCMLNIIM_01777 1.7e-160 GK ROK family
PCMLNIIM_01778 8.5e-134 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PCMLNIIM_01779 2.1e-157 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PCMLNIIM_01780 1.3e-128 K DNA-binding helix-turn-helix protein
PCMLNIIM_01781 2.7e-91 niaR S small molecule binding protein (contains 3H domain)
PCMLNIIM_01782 2.7e-86
PCMLNIIM_01783 1e-274 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PCMLNIIM_01784 2e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PCMLNIIM_01785 1e-125 gntR1 K transcriptional
PCMLNIIM_01786 2.3e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PCMLNIIM_01787 3.7e-97
PCMLNIIM_01788 2.4e-56 S ABC-2 type transporter
PCMLNIIM_01789 2.9e-162 V AAA domain, putative AbiEii toxin, Type IV TA system
PCMLNIIM_01790 4.2e-189 adhP 1.1.1.1 C alcohol dehydrogenase
PCMLNIIM_01791 2.1e-45
PCMLNIIM_01792 6.4e-50
PCMLNIIM_01793 6.7e-270 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PCMLNIIM_01794 1.1e-155 aatB ET ABC transporter substrate-binding protein
PCMLNIIM_01795 1.2e-112 glnQ 3.6.3.21 E abc transporter atp-binding protein
PCMLNIIM_01796 1.4e-105 artQ P ABC transporter (Permease
PCMLNIIM_01797 6.6e-59 phnA P Alkylphosphonate utilization operon protein PhnA
PCMLNIIM_01798 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PCMLNIIM_01799 2.9e-165 cpsY K Transcriptional regulator
PCMLNIIM_01800 1.3e-128 mur1 3.4.17.14, 3.5.1.28 NU muramidase
PCMLNIIM_01801 7.4e-170 yeiH S Membrane
PCMLNIIM_01803 2.6e-09
PCMLNIIM_01804 4.7e-293 adcA P Belongs to the bacterial solute-binding protein 9 family
PCMLNIIM_01805 9.3e-147 XK27_10720 D peptidase activity
PCMLNIIM_01806 1.1e-275 pepD E Dipeptidase
PCMLNIIM_01807 5.7e-161 whiA K May be required for sporulation
PCMLNIIM_01808 1.4e-181 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PCMLNIIM_01809 7e-164 rapZ S Displays ATPase and GTPase activities
PCMLNIIM_01810 3.7e-137 yejC S cyclic nucleotide-binding protein
PCMLNIIM_01811 7.3e-201 D nuclear chromosome segregation
PCMLNIIM_01812 2.5e-94 queF 1.7.1.13 S Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily
PCMLNIIM_01813 5.1e-133 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
PCMLNIIM_01814 9.7e-82 queD 4.1.2.50, 4.2.3.12 H synthase
PCMLNIIM_01815 1.2e-123 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
PCMLNIIM_01816 8.6e-63 tdcF 3.5.99.10 J endoribonuclease L-PSP
PCMLNIIM_01817 9.7e-20
PCMLNIIM_01818 2.4e-261 asnS 6.1.1.22 J Catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
PCMLNIIM_01819 1.1e-212 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
PCMLNIIM_01820 1.1e-81 ypmB S Protein conserved in bacteria
PCMLNIIM_01821 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PCMLNIIM_01822 4e-121 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
PCMLNIIM_01823 1.2e-169 yufQ S Belongs to the binding-protein-dependent transport system permease family
PCMLNIIM_01824 8.6e-177 yufP S Belongs to the binding-protein-dependent transport system permease family
PCMLNIIM_01825 1.4e-281 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
PCMLNIIM_01826 1.1e-192 tcsA S membrane
PCMLNIIM_01827 2.8e-64 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PCMLNIIM_01828 3.9e-108 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PCMLNIIM_01829 1.1e-231 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
PCMLNIIM_01830 8.3e-105 rsmC 2.1.1.172 J Methyltransferase small domain protein
PCMLNIIM_01831 4e-170 coaA 2.7.1.33 F Pantothenic acid kinase
PCMLNIIM_01832 1e-29 rpsT J Binds directly to 16S ribosomal RNA
PCMLNIIM_01833 1.9e-240 T PhoQ Sensor
PCMLNIIM_01834 2.1e-120 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCMLNIIM_01835 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PCMLNIIM_01836 9.3e-116 coaB 4.1.1.36, 6.3.2.5 H Phosphopantothenate-cysteine ligase
PCMLNIIM_01837 3.3e-92 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PCMLNIIM_01838 2.4e-93 panT S ECF transporter, substrate-specific component
PCMLNIIM_01839 3.8e-91 panT S Psort location CytoplasmicMembrane, score
PCMLNIIM_01840 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
PCMLNIIM_01841 3.3e-166 metF 1.5.1.20 E reductase
PCMLNIIM_01842 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PCMLNIIM_01844 0.0 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH component I
PCMLNIIM_01845 0.0 3.6.3.8 P cation transport ATPase
PCMLNIIM_01846 7.9e-246 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PCMLNIIM_01847 2.2e-35 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PCMLNIIM_01848 1.7e-237 dltB M Membrane protein involved in D-alanine export
PCMLNIIM_01849 1.3e-298 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PCMLNIIM_01850 0.0 XK27_10035 V abc transporter atp-binding protein
PCMLNIIM_01851 5.9e-292 yfiB1 V abc transporter atp-binding protein
PCMLNIIM_01852 1.9e-99 pvaA M lytic transglycosylase activity
PCMLNIIM_01853 1.9e-178 ndpA S 37-kD nucleoid-associated bacterial protein
PCMLNIIM_01854 2.3e-229 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PCMLNIIM_01855 3.6e-103 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PCMLNIIM_01856 1.7e-143 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PCMLNIIM_01857 3.6e-191 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PCMLNIIM_01858 7.3e-109 tdk 2.7.1.21 F thymidine kinase
PCMLNIIM_01859 1.1e-184 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PCMLNIIM_01860 2.7e-151 gst O Glutathione S-transferase
PCMLNIIM_01861 2.9e-176 nrnA 3.1.13.3, 3.1.3.7 S domain protein
PCMLNIIM_01862 3.4e-177 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PCMLNIIM_01863 4.4e-45 rpmE2 J 50S ribosomal protein L31
PCMLNIIM_01864 4.4e-115 mntH P Mn2 and Fe2 transporters of the NRAMP family
PCMLNIIM_01865 9.5e-98 mntH P Mn2 and Fe2 transporters of the NRAMP family
PCMLNIIM_01866 7.6e-164 ypuA S secreted protein
PCMLNIIM_01867 2e-70 yaeR E COG0346 Lactoylglutathione lyase and related lyases
PCMLNIIM_01868 9.3e-133 srtA 3.4.22.70 M Sortase (surface protein transpeptidase)
PCMLNIIM_01869 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PCMLNIIM_01870 4.1e-181 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PCMLNIIM_01873 3.5e-30 1.3.5.4 C reductase
PCMLNIIM_01874 0.0 sbcC L ATPase involved in DNA repair
PCMLNIIM_01875 7.9e-219 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PCMLNIIM_01876 0.0 GM domain, Protein
PCMLNIIM_01877 0.0 zmpB M signal peptide protein, YSIRK family
PCMLNIIM_01878 0.0 M Pilin isopeptide linkage domain protein
PCMLNIIM_01879 0.0 glgE 2.3.1.12, 2.4.99.16, 3.2.1.1, 3.2.1.14 GH13,GH18 M Pilin isopeptide linkage domain protein
PCMLNIIM_01880 3.7e-189 XK27_10075 S abc transporter atp-binding protein
PCMLNIIM_01881 0.0 V abc transporter atp-binding protein
PCMLNIIM_01882 3.6e-297 V abc transporter atp-binding protein
PCMLNIIM_01883 0.0 gshF 6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
PCMLNIIM_01885 3.6e-285 S Protein of unknown function (DUF3114)
PCMLNIIM_01886 1.1e-98 2.3.1.128 K Acetyltransferase GNAT Family
PCMLNIIM_01887 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PCMLNIIM_01888 2.8e-284 glgA 2.4.1.21 GT5 G Synthesizes alpha-1,4-glucan chains using ADP-glucose
PCMLNIIM_01889 2.8e-181 glgD 2.4.1.21, 2.7.7.27 GT5 G glucose-1-phosphate adenylyltransferase
PCMLNIIM_01890 1e-188 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PCMLNIIM_01891 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PCMLNIIM_01892 0.0 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PCMLNIIM_01893 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PCMLNIIM_01894 4.6e-188 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
PCMLNIIM_01895 1.9e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PCMLNIIM_01896 7.6e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PCMLNIIM_01899 1.4e-113 vraR K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PCMLNIIM_01900 3.9e-171 vraS 2.7.13.3 T Histidine kinase
PCMLNIIM_01901 2.5e-116 yvqF S Membrane
PCMLNIIM_01902 4.1e-104 kcsA P Ion transport protein
PCMLNIIM_01903 8.9e-302 prkC 2.7.11.1 KLT serine threonine protein kinase
PCMLNIIM_01904 4.8e-137 stp 3.1.3.16 T phosphatase
PCMLNIIM_01905 8e-249 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PCMLNIIM_01906 3.6e-171 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PCMLNIIM_01907 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PCMLNIIM_01908 7.9e-46 rpoZ 2.7.7.6 K DNA-directed 5'-3' RNA polymerase activity
PCMLNIIM_01909 8.8e-113 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
PCMLNIIM_01910 1e-193 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PCMLNIIM_01911 3.5e-146 XK27_02985 S overlaps another CDS with the same product name
PCMLNIIM_01912 1.4e-147 supH S overlaps another CDS with the same product name
PCMLNIIM_01913 5.6e-62 yvoA_1 K Transcriptional
PCMLNIIM_01914 1.8e-119 skfE V abc transporter atp-binding protein
PCMLNIIM_01915 5.3e-131 V Psort location CytoplasmicMembrane, score
PCMLNIIM_01916 9.5e-172 oppF P Belongs to the ABC transporter superfamily
PCMLNIIM_01917 6e-202 oppD P Belongs to the ABC transporter superfamily
PCMLNIIM_01918 1.4e-167 amiD P ABC transporter (Permease
PCMLNIIM_01919 1.1e-278 amiC P ABC transporter (Permease
PCMLNIIM_01920 0.0 amiA E ABC transporter, substrate-binding protein, family 5
PCMLNIIM_01921 1.1e-178 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PCMLNIIM_01922 1.2e-171 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PCMLNIIM_01923 7.5e-152 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PCMLNIIM_01924 2e-118 yjbM 2.7.6.5 S Gtp pyrophosphokinase
PCMLNIIM_01925 2.1e-100 yjbK S Adenylate cyclase
PCMLNIIM_01926 6.6e-176 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PCMLNIIM_01927 3.4e-200 iscS 2.8.1.7 E Cysteine desulfurase
PCMLNIIM_01928 8.2e-60 XK27_04120 S Putative amino acid metabolism
PCMLNIIM_01929 2.1e-117 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PCMLNIIM_01930 1.8e-127 puuD T peptidase C26
PCMLNIIM_01931 1.8e-114 radC E Belongs to the UPF0758 family
PCMLNIIM_01932 7.5e-166
PCMLNIIM_01933 4.3e-46 M Psort location CytoplasmicMembrane, score
PCMLNIIM_01934 4.3e-156 rfbJ M Glycosyl transferase family 2
PCMLNIIM_01935 0.0 rgpF M Rhamnan synthesis protein F
PCMLNIIM_01936 9.2e-184 rgpEc GT2 M Glycosyl transferase family 2
PCMLNIIM_01937 5.3e-223 rgpD 3.6.3.38 P Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PCMLNIIM_01938 5.2e-142 rgpC GM Transport permease protein
PCMLNIIM_01939 1e-173 rgpB GT2 M Glycosyltransferase, group 2 family protein
PCMLNIIM_01940 6.1e-213 rgpA GT4 M Domain of unknown function (DUF1972)
PCMLNIIM_01941 1.9e-158 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PCMLNIIM_01942 2.5e-172 yfdH GT2 M COG0463, glycosyltransferases involved in cell wall biogenesis
PCMLNIIM_01943 3.4e-55 yitW K metal-sulfur cluster biosynthetic enzyme
PCMLNIIM_01944 2.3e-201 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PCMLNIIM_01945 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PCMLNIIM_01946 9.8e-51 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PCMLNIIM_01947 3.2e-20 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PCMLNIIM_01948 7.2e-136 gltS ET Belongs to the bacterial solute-binding protein 3 family
PCMLNIIM_01949 2.3e-209 arcT 2.6.1.1 E Aminotransferase
PCMLNIIM_01950 5.9e-138 ET Belongs to the bacterial solute-binding protein 3 family
PCMLNIIM_01951 9.3e-139 ET ABC transporter
PCMLNIIM_01952 3.7e-84 mutT 3.6.1.55 F Nudix family
PCMLNIIM_01953 7.6e-21 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PCMLNIIM_01954 1.8e-113 ycaK 1.6.5.2 S NADPH-dependent FMN reductase
PCMLNIIM_01955 2e-88 MA20_25245 K Gnat family
PCMLNIIM_01956 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PCMLNIIM_01958 3.4e-169 S CAAX amino terminal protease family protein
PCMLNIIM_01959 0.0 glnP P ABC-type amino acid transport signal transduction systems periplasmic component domain
PCMLNIIM_01960 1e-136 glnQ 3.6.3.21 E abc transporter atp-binding protein
PCMLNIIM_01961 1.7e-17 XK27_00735
PCMLNIIM_01962 6.7e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PCMLNIIM_01964 4.4e-132 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PCMLNIIM_01965 9.8e-10 O ADP-ribosylglycohydrolase
PCMLNIIM_01966 3e-63 paaI Q protein possibly involved in aromatic compounds catabolism
PCMLNIIM_01967 4.1e-62 ycaO O OsmC-like protein
PCMLNIIM_01969 1.8e-151 EG Permeases of the drug metabolite transporter (DMT) superfamily
PCMLNIIM_01970 2.5e-07 N PFAM Uncharacterised protein family UPF0150
PCMLNIIM_01971 3.8e-106 csn2 S CRISPR-associated protein (Cas_Csn2)
PCMLNIIM_01972 2e-52 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PCMLNIIM_01973 3.9e-159 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PCMLNIIM_01974 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)