ORF_ID e_value Gene_name EC_number CAZy COGs Description
LNIPHOMF_00001 1.1e-75 yxaI S membrane protein domain
LNIPHOMF_00002 1.4e-228 P Protein of unknown function (DUF418)
LNIPHOMF_00003 1.5e-199 yxaG 1.13.11.24 S AraC-like ligand binding domain
LNIPHOMF_00004 7.1e-101 yxaF K Transcriptional regulator
LNIPHOMF_00005 2.3e-201 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
LNIPHOMF_00006 4.4e-71 yxaD K helix_turn_helix multiple antibiotic resistance protein
LNIPHOMF_00007 1e-215 xylR GK ROK family
LNIPHOMF_00008 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
LNIPHOMF_00009 2.7e-255 xynT G MFS/sugar transport protein
LNIPHOMF_00010 7.9e-108 tagF 2.7.8.12 M glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
LNIPHOMF_00011 1.1e-150 tagG GM Transport permease protein
LNIPHOMF_00012 1.8e-279 tagH 3.6.3.38, 3.6.3.40 GM Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
LNIPHOMF_00013 1.6e-100 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
LNIPHOMF_00015 7.7e-185 S Radical SAM superfamily
LNIPHOMF_00016 8e-12
LNIPHOMF_00017 0.0 fbp 3.1.3.11 G Firmicute fructose-1,6-bisphosphatase
LNIPHOMF_00018 5e-227 ydeG EGP Major facilitator Superfamily
LNIPHOMF_00019 1.5e-143 yddR S Zn-dependent hydrolases of the beta-lactamase fold
LNIPHOMF_00020 9.6e-100 yddQ 3.5.1.19 Q Isochorismatase family
LNIPHOMF_00021 3.9e-78 lrpB K transcriptional
LNIPHOMF_00022 2.4e-71 lrpA K transcriptional
LNIPHOMF_00023 8.2e-252 agcS E Sodium alanine symporter
LNIPHOMF_00024 2.4e-297 bglC5 3.2.1.4 GH5,GH9 G PFAM glycoside hydrolase family 5
LNIPHOMF_00026 2.8e-99 J Acetyltransferase (GNAT) domain
LNIPHOMF_00027 3.2e-109 yokK S SMI1 / KNR4 family
LNIPHOMF_00028 1.9e-94 yokJ S SMI1 / KNR4 family (SUKH-1)
LNIPHOMF_00029 1.2e-302 UW nuclease activity
LNIPHOMF_00030 3.3e-113 yokF 3.1.31.1 L RNA catabolic process
LNIPHOMF_00031 4.1e-203
LNIPHOMF_00032 1.2e-86
LNIPHOMF_00033 1.1e-96 S Super-infection exclusion protein B
LNIPHOMF_00038 1.1e-07 ywlA S Uncharacterised protein family (UPF0715)
LNIPHOMF_00039 2.5e-82
LNIPHOMF_00040 2.6e-163 fabD 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
LNIPHOMF_00042 2.4e-186 pksD Q Acyl transferase domain
LNIPHOMF_00043 4e-89 ylbP K n-acetyltransferase
LNIPHOMF_00044 6.8e-75 ylbO S SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
LNIPHOMF_00045 1.2e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
LNIPHOMF_00046 1.3e-90 yceD S metal-binding, possibly nucleic acid-binding protein
LNIPHOMF_00048 2.8e-235 ylbM S Belongs to the UPF0348 family
LNIPHOMF_00049 6.8e-187 ylbL T Belongs to the peptidase S16 family
LNIPHOMF_00050 7.5e-138 ylbK S esterase of the alpha-beta hydrolase superfamily
LNIPHOMF_00051 3.8e-221 ylbJ S Sporulation integral membrane protein YlbJ
LNIPHOMF_00052 3.9e-84 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LNIPHOMF_00053 1.9e-98 rsmD 2.1.1.171 L Methyltransferase
LNIPHOMF_00054 7.5e-39 ylbG S UPF0298 protein
LNIPHOMF_00055 1.8e-75 ylbF S Belongs to the UPF0342 family
LNIPHOMF_00056 6.7e-37 ylbE S YlbE-like protein
LNIPHOMF_00057 4.1e-63 ylbD S Putative coat protein
LNIPHOMF_00058 3e-201 ylbC S protein with SCP PR1 domains
LNIPHOMF_00059 2.6e-74 ylbB T COG0517 FOG CBS domain
LNIPHOMF_00060 7e-62 ylbA S YugN-like family
LNIPHOMF_00061 3e-167 ctaG S cytochrome c oxidase
LNIPHOMF_00062 4.2e-53 ctaF 1.10.3.12, 1.9.3.1 C COG3125 Heme copper-type cytochrome quinol oxidase, subunit 4
LNIPHOMF_00063 3.3e-112 cyoC 1.10.3.12, 1.9.3.1 C COG1845 Heme copper-type cytochrome quinol oxidase, subunit 3
LNIPHOMF_00064 0.0 ctaD 1.10.3.12, 1.9.3.1 C Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LNIPHOMF_00065 6.2e-191 ctaC 1.9.3.1 C Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)
LNIPHOMF_00066 3.2e-164 ctaB 2.5.1.141 O Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
LNIPHOMF_00067 2.6e-166 ctaA 2.5.1.141 O Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group
LNIPHOMF_00068 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
LNIPHOMF_00069 4.5e-214 ftsW D Belongs to the SEDS family
LNIPHOMF_00070 8.7e-44 ylaN S Belongs to the UPF0358 family
LNIPHOMF_00071 1.6e-171 glsA 3.5.1.2 E Belongs to the glutaminase family
LNIPHOMF_00072 2.7e-85 ylaL S Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
LNIPHOMF_00073 8e-249 phoH T ATPase related to phosphate starvation-inducible protein PhoH
LNIPHOMF_00074 1.1e-89 ylaJ S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
LNIPHOMF_00075 2.5e-32 ylaI S protein conserved in bacteria
LNIPHOMF_00076 4.2e-47 ylaH S YlaH-like protein
LNIPHOMF_00077 0.0 typA T GTP-binding protein TypA
LNIPHOMF_00078 8.2e-22 S Family of unknown function (DUF5325)
LNIPHOMF_00079 1.8e-38 ylaE
LNIPHOMF_00080 1.2e-11 sigC S Putative zinc-finger
LNIPHOMF_00081 2.7e-91 ylaC K Belongs to the sigma-70 factor family. ECF subfamily
LNIPHOMF_00082 2.7e-42 ylaB
LNIPHOMF_00083 0.0 ylaA
LNIPHOMF_00084 2.2e-293 mpl 3.4.24.28, 3.4.24.29 E Peptidase M4
LNIPHOMF_00085 6.5e-173 Q Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
LNIPHOMF_00086 6.9e-78 ykzC S Acetyltransferase (GNAT) family
LNIPHOMF_00087 4.6e-151 suhB 3.1.3.25 G Inositol monophosphatase
LNIPHOMF_00088 7.2e-26 ykzI
LNIPHOMF_00089 7.1e-118 yktB S Belongs to the UPF0637 family
LNIPHOMF_00090 1.6e-42 yktA S Belongs to the UPF0223 family
LNIPHOMF_00091 3.5e-277 speA 4.1.1.19 E Arginine
LNIPHOMF_00092 1.3e-63 slp CO COG0526, thiol-disulfide isomerase and thioredoxins
LNIPHOMF_00093 2.4e-243 lpdA 1.8.1.4 C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
LNIPHOMF_00094 9.9e-231 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
LNIPHOMF_00095 2.9e-179 pdhB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
LNIPHOMF_00096 9.9e-192 pdhA 1.2.4.1, 1.2.4.4 C COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
LNIPHOMF_00097 2e-115 recN L Putative cell-wall binding lipoprotein
LNIPHOMF_00099 4e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LNIPHOMF_00100 1.4e-147 ykrA S hydrolases of the HAD superfamily
LNIPHOMF_00101 8.2e-31 ykzG S Belongs to the UPF0356 family
LNIPHOMF_00102 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LNIPHOMF_00103 0.0 ade 3.5.4.2 F Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
LNIPHOMF_00104 4e-116 ktrA P COG0569 K transport systems, NAD-binding component
LNIPHOMF_00105 1.6e-162 ykqA P Gamma-glutamyl cyclotransferase, AIG2-like
LNIPHOMF_00106 2.7e-241 kinC 2.7.13.3 T COG0642 Signal transduction histidine kinase
LNIPHOMF_00107 1.5e-43 abrB K of stationary sporulation gene expression
LNIPHOMF_00108 7.7e-183 mreB D Rod-share determining protein MreBH
LNIPHOMF_00109 1.1e-12 S Uncharacterized protein YkpC
LNIPHOMF_00110 2e-238 ampS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
LNIPHOMF_00111 1.5e-169 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LNIPHOMF_00112 5.8e-310 ybiT S COG0488 ATPase components of ABC transporters with duplicated ATPase domains
LNIPHOMF_00113 8.1e-39 ykoA
LNIPHOMF_00114 4.8e-105 sipT 3.4.21.89 U Belongs to the peptidase S26 family
LNIPHOMF_00115 0.0 fruA 2.7.1.202 GT COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type)
LNIPHOMF_00116 6.2e-168 fruK 2.7.1.11, 2.7.1.56 G Belongs to the carbohydrate kinase PfkB family
LNIPHOMF_00117 3.1e-136 fruR K Transcriptional regulator
LNIPHOMF_00118 2.1e-211 yknZ V COG0577 ABC-type antimicrobial peptide transport system, permease component
LNIPHOMF_00119 2.5e-124 macB V ABC transporter, ATP-binding protein
LNIPHOMF_00120 3e-159 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LNIPHOMF_00121 1e-117 yknW S Yip1 domain
LNIPHOMF_00122 0.0 yknV V COG1132 ABC-type multidrug transport system, ATPase and permease components
LNIPHOMF_00123 0.0 yknU V COG1132 ABC-type multidrug transport system, ATPase and permease components
LNIPHOMF_00124 2.8e-32 moaD 2.8.1.12 H Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
LNIPHOMF_00125 8.5e-84 moaE 2.8.1.12 H COG0314 Molybdopterin converting factor, large subunit
LNIPHOMF_00126 9.9e-94 mobB 2.10.1.1, 2.7.7.77 H molybdopterin-guanine dinucleotide biosynthesis protein
LNIPHOMF_00127 8.1e-246 moeA 2.10.1.1 H molybdopterin
LNIPHOMF_00128 5.3e-192 moeB 2.7.7.73, 2.7.7.80 H COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
LNIPHOMF_00129 3.9e-110 mobA 2.7.7.77 H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
LNIPHOMF_00130 2.9e-147 yknT
LNIPHOMF_00131 5.8e-95 rok K Repressor of ComK
LNIPHOMF_00132 4.4e-82 ykuV CO thiol-disulfide
LNIPHOMF_00133 3.9e-101 ykuU O Alkyl hydroperoxide reductase
LNIPHOMF_00134 8.8e-142 ykuT M Mechanosensitive ion channel
LNIPHOMF_00135 9e-37 ykuS S Belongs to the UPF0180 family
LNIPHOMF_00136 5.8e-216 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
LNIPHOMF_00137 1.1e-74 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
LNIPHOMF_00138 3.2e-80 fld C Flavodoxin
LNIPHOMF_00139 3.2e-177 ykuO
LNIPHOMF_00140 5.7e-88 fld C Flavodoxin domain
LNIPHOMF_00141 3.5e-168 ccpC K Transcriptional regulator
LNIPHOMF_00142 1.6e-76 ykuL S CBS domain
LNIPHOMF_00143 3.9e-27 ykzF S Antirepressor AbbA
LNIPHOMF_00144 4.4e-94 ykuK S Ribonuclease H-like
LNIPHOMF_00145 3.9e-37 ykuJ S protein conserved in bacteria
LNIPHOMF_00146 5.2e-234 ykuI T Diguanylate phosphodiesterase
LNIPHOMF_00148 3e-86 S SMI1-KNR4 cell-wall
LNIPHOMF_00149 0.0 L A nuclease of the HNH/ENDO VII superfamily with conserved LHH
LNIPHOMF_00150 1.7e-93 M Peptidoglycan-binding domain 1 protein
LNIPHOMF_00151 0.0 3.2.1.132 M Putative peptidoglycan binding domain
LNIPHOMF_00152 1.2e-49
LNIPHOMF_00153 2.6e-38 S YolD-like protein
LNIPHOMF_00154 1.4e-59 dinB2 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LNIPHOMF_00155 1.2e-123 dinB2 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LNIPHOMF_00157 2.4e-40 S aspartate phosphatase
LNIPHOMF_00158 1.2e-199 V AAA domain (dynein-related subfamily)
LNIPHOMF_00160 2.4e-169 bsn L Ribonuclease
LNIPHOMF_00162 6.8e-09 S Domain of unknown function (DUF4879)
LNIPHOMF_00164 1.7e-249 tetL EGP Major facilitator Superfamily
LNIPHOMF_00167 1.8e-178 yobF
LNIPHOMF_00168 3.2e-56 xre K Helix-turn-helix XRE-family like proteins
LNIPHOMF_00169 1.6e-111 xkdA E IrrE N-terminal-like domain
LNIPHOMF_00170 4.4e-160 ydbD P Catalase
LNIPHOMF_00171 4.2e-112 yjqB S Pfam:DUF867
LNIPHOMF_00172 2.1e-61 yjqA S Bacterial PH domain
LNIPHOMF_00173 9.1e-170 xlyA 3.5.1.28 CBM50 M N-acetylmuramoyl-L-alanine amidase
LNIPHOMF_00174 6.3e-41 S YCII-related domain
LNIPHOMF_00176 2.1e-213 S response regulator aspartate phosphatase
LNIPHOMF_00177 9.4e-247 ftsH2 3.4.21.53 O AAA domain (dynein-related subfamily)
LNIPHOMF_00178 3.3e-80 yjoA S DinB family
LNIPHOMF_00179 4.3e-130 MA20_18170 S membrane transporter protein
LNIPHOMF_00180 2e-288 uxaA 4.2.1.7, 4.4.1.24 G Altronate
LNIPHOMF_00181 2.1e-287 uxaB 1.1.1.17, 1.1.1.58 G tagaturonate reductase activity
LNIPHOMF_00182 2.3e-184 exuR K transcriptional
LNIPHOMF_00183 3.7e-227 exuT G Sugar (and other) transporter
LNIPHOMF_00184 2.3e-153 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
LNIPHOMF_00185 4.7e-215 uxuA 4.2.1.8 G Catalyzes the dehydration of D-mannonate
LNIPHOMF_00186 1.6e-193 rspB 1.1.1.380 E Alcohol dehydrogenase GroES-like domain
LNIPHOMF_00187 3e-195 yjmC 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
LNIPHOMF_00188 5.8e-250 yjmB G symporter YjmB
LNIPHOMF_00189 6.3e-284 uxaC 5.3.1.12 G glucuronate isomerase
LNIPHOMF_00190 2.6e-219 yjlD 1.6.99.3 C NADH dehydrogenase
LNIPHOMF_00191 7.1e-66 yjlC S Protein of unknown function (DUF1641)
LNIPHOMF_00192 2.8e-93 yjlB S Cupin domain
LNIPHOMF_00193 1.8e-176 yjlA EG Putative multidrug resistance efflux transporter
LNIPHOMF_00194 5.2e-136 pstB 3.6.3.27 P ATPases associated with a variety of cellular activities
LNIPHOMF_00195 1.9e-122 ybbM S transport system, permease component
LNIPHOMF_00196 1.2e-146 hemD 2.1.1.107, 4.2.1.75 H Uroporphyrinogen-III synthase
LNIPHOMF_00197 8.2e-30
LNIPHOMF_00198 4.5e-219 oleD GT1 CG COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
LNIPHOMF_00199 3.8e-226 yjiB 1.14.13.154, 1.14.15.8 C Cytochrome P450
LNIPHOMF_00201 2e-117 yjhB 3.6.1.13, 3.6.1.55 F ADP-ribose pyrophosphatase
LNIPHOMF_00202 8.7e-07 S Domain of unknown function (DUF4352)
LNIPHOMF_00203 4.3e-95 yjgD S Protein of unknown function (DUF1641)
LNIPHOMF_00204 0.0 yjgC 1.17.1.10, 1.17.1.9 C formate dehydrogenase (NAD+) activity
LNIPHOMF_00205 8.9e-104 yjgB S Domain of unknown function (DUF4309)
LNIPHOMF_00206 1.2e-45 T PhoQ Sensor
LNIPHOMF_00207 1.6e-171 yjfC O Predicted Zn-dependent protease (DUF2268)
LNIPHOMF_00208 3.6e-21 yjfB S Putative motility protein
LNIPHOMF_00209 5.5e-83 S Protein of unknown function (DUF2690)
LNIPHOMF_00210 4.9e-265 xynD 3.5.1.104 G Polysaccharide deacetylase
LNIPHOMF_00212 3.3e-175 cyoE 2.5.1.141 O Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
LNIPHOMF_00213 2.7e-52 yjdJ S Domain of unknown function (DUF4306)
LNIPHOMF_00214 4.2e-29 S Domain of unknown function (DUF4177)
LNIPHOMF_00215 8e-82 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LNIPHOMF_00217 2.5e-94 yjdG 2.3.1.128 J Acetyltransferase (GNAT) domain
LNIPHOMF_00218 4.8e-51 yjdF S Protein of unknown function (DUF2992)
LNIPHOMF_00219 6.7e-189 manA 5.3.1.8 G mannose-6-phosphate isomerase
LNIPHOMF_00220 0.0 manP 2.7.1.191, 2.7.1.202 G phosphotransferase system
LNIPHOMF_00221 0.0 manR 2.7.1.200, 2.7.1.202 GKT transcriptional antiterminator
LNIPHOMF_00223 2.4e-141 IQ Enoyl-(Acyl carrier protein) reductase
LNIPHOMF_00224 2.2e-47 yjcS S Antibiotic biosynthesis monooxygenase
LNIPHOMF_00225 1.1e-92 yqaS L DNA packaging
LNIPHOMF_00226 4.1e-49 S YjcQ protein
LNIPHOMF_00227 1.6e-72 yjcP
LNIPHOMF_00228 8.5e-81 L Transposase
LNIPHOMF_00231 2.6e-44 yjcN
LNIPHOMF_00232 2.1e-190 S Putative amidase domain
LNIPHOMF_00235 1.1e-212 yjcL S Protein of unknown function (DUF819)
LNIPHOMF_00236 3.7e-99 rimJ 2.3.1.128 J Alanine acetyltransferase
LNIPHOMF_00237 2.9e-218 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
LNIPHOMF_00238 3.8e-215 metB 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
LNIPHOMF_00239 1.8e-138 yjcH P COG2382 Enterochelin esterase and related enzymes
LNIPHOMF_00240 2.9e-93 yjcG J Belongs to the 2H phosphoesterase superfamily. YjcG family
LNIPHOMF_00241 3e-72 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LNIPHOMF_00242 1.7e-38
LNIPHOMF_00243 0.0 yjcD 3.6.4.12 L DNA helicase
LNIPHOMF_00244 2.9e-38 spoVIF S Stage VI sporulation protein F
LNIPHOMF_00247 8.7e-57 yjcA S Protein of unknown function (DUF1360)
LNIPHOMF_00248 2.3e-55 cotV S Spore Coat Protein X and V domain
LNIPHOMF_00249 3e-32 cotW
LNIPHOMF_00250 6.4e-77 cotX S Spore Coat Protein X and V domain
LNIPHOMF_00251 3.4e-96 cotY S Spore coat protein Z
LNIPHOMF_00252 5.2e-83 cotZ S Spore coat protein
LNIPHOMF_00253 5.9e-54 yjbX S Spore coat protein
LNIPHOMF_00254 3.2e-141 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
LNIPHOMF_00255 5.3e-150 thiD 2.5.1.3, 2.7.1.35, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
LNIPHOMF_00256 6e-188 thiF 2.7.7.73, 2.7.7.80 H COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
LNIPHOMF_00257 1.5e-135 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
LNIPHOMF_00258 3e-30 thiS H thiamine diphosphate biosynthetic process
LNIPHOMF_00259 7.2e-219 thiO 1.4.3.19 E Glycine oxidase
LNIPHOMF_00260 3.8e-108 tenI 2.5.1.3, 5.3.99.10 H Transcriptional regulator TenI
LNIPHOMF_00261 3.4e-137 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LNIPHOMF_00262 0.0 yjbQ P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
LNIPHOMF_00263 3e-128 prpE 3.1.3.16, 3.6.1.41 T Asymmetrically hydrolyzes Ap4p to yield AMP and ATP
LNIPHOMF_00264 9.5e-161 yjbO 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LNIPHOMF_00265 2.1e-151 nadK 2.7.1.23 G Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LNIPHOMF_00266 2.6e-112 yjbM 2.7.6.5 S GTP pyrophosphokinase
LNIPHOMF_00267 7.1e-62 yjbL S Belongs to the UPF0738 family
LNIPHOMF_00268 2.4e-101 yjbK S protein conserved in bacteria
LNIPHOMF_00269 1.5e-87 yjbJ M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
LNIPHOMF_00270 3.7e-72 yjbI S Bacterial-like globin
LNIPHOMF_00271 3.3e-169 yjbH Q dithiol-disulfide isomerase involved in polyketide biosynthesis
LNIPHOMF_00273 1.8e-20
LNIPHOMF_00274 0.0 pepF E oligoendopeptidase F
LNIPHOMF_00275 2.3e-223 yjbF S Competence protein
LNIPHOMF_00276 2.3e-116 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
LNIPHOMF_00277 6e-112 yjbE P Integral membrane protein TerC family
LNIPHOMF_00278 2.1e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
LNIPHOMF_00279 2.7e-188 luxA C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LNIPHOMF_00283 1.3e-134 S Domain of unknown function, YrpD
LNIPHOMF_00284 1.2e-165 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LNIPHOMF_00286 6.5e-81 L Transposase
LNIPHOMF_00288 6.3e-107 yqaS L DNA packaging
LNIPHOMF_00289 2.4e-253 S phage terminase, large subunit
LNIPHOMF_00290 5.9e-296 yqbA S portal protein
LNIPHOMF_00291 5.7e-169 S Phage Mu protein F like protein
LNIPHOMF_00292 2e-115
LNIPHOMF_00293 5.1e-128 yqbD 2.1.1.72 L Putative phage serine protease XkdF
LNIPHOMF_00294 1.9e-167 xkdG S Phage capsid family
LNIPHOMF_00295 3.6e-51 S YqbF, hypothetical protein domain
LNIPHOMF_00296 2.1e-67 S Protein of unknown function (DUF3199)
LNIPHOMF_00297 6.7e-65 yqbH S Domain of unknown function (DUF3599)
LNIPHOMF_00298 4.3e-94 S Bacteriophage HK97-gp10, putative tail-component
LNIPHOMF_00299 1.4e-77
LNIPHOMF_00300 3.2e-26
LNIPHOMF_00301 5.5e-256 xkdK S Phage tail sheath C-terminal domain
LNIPHOMF_00302 3.6e-76 xkdM S Phage tail tube protein
LNIPHOMF_00304 1.8e-67 S Phage XkdN-like tail assembly chaperone protein, TAC
LNIPHOMF_00305 0.0 xkdO L Transglycosylase SLT domain
LNIPHOMF_00306 9e-114 xkdP S Lysin motif
LNIPHOMF_00307 2.4e-181 yqbQ 3.2.1.96 G NLP P60 protein
LNIPHOMF_00308 1.8e-38 xkdR S Protein of unknown function (DUF2577)
LNIPHOMF_00309 9.6e-71 xkdS S Protein of unknown function (DUF2634)
LNIPHOMF_00310 6e-191 xkdT S Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
LNIPHOMF_00311 9.9e-103 xkdU S Uncharacterised protein conserved in bacteria (DUF2313)
LNIPHOMF_00312 9.6e-40
LNIPHOMF_00313 2e-221
LNIPHOMF_00314 4.1e-56 xkdW S XkdW protein
LNIPHOMF_00315 1.3e-23
LNIPHOMF_00316 4.8e-165 xepA
LNIPHOMF_00317 2.6e-68 S Bacteriophage holin family
LNIPHOMF_00318 1.1e-144 xlyA 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
LNIPHOMF_00320 5e-60
LNIPHOMF_00322 1.1e-104 S Suppressor of fused protein (SUFU)
LNIPHOMF_00323 3.8e-277 A Pre-toxin TG
LNIPHOMF_00326 1.6e-96 S Tetratricopeptide repeat
LNIPHOMF_00327 1.1e-152 yqcI S YqcI/YcgG family
LNIPHOMF_00328 1.6e-54 arsR K ArsR family transcriptional regulator
LNIPHOMF_00329 2.8e-73 cadI 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LNIPHOMF_00330 6e-183 arsB 1.20.4.1 P Arsenic resistance protein
LNIPHOMF_00331 1.8e-77 arsC 1.20.4.1 T Catalyzes the reduction of arsenate As(V) to arsenite As(III)
LNIPHOMF_00332 1.4e-281 cisA2 L Recombinase
LNIPHOMF_00333 3.3e-56 sigK K sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LNIPHOMF_00334 1.1e-74 nucB M Deoxyribonuclease NucA/NucB
LNIPHOMF_00335 2.3e-133 yqeB
LNIPHOMF_00336 1.2e-171 gnd 1.1.1.343, 1.1.1.44 G 6-phosphogluconate dehydrogenase
LNIPHOMF_00337 4.7e-106 yqeD S SNARE associated Golgi protein
LNIPHOMF_00338 2.1e-137 xlyA 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
LNIPHOMF_00339 6.2e-142 yqeF E GDSL-like Lipase/Acylhydrolase
LNIPHOMF_00341 5.3e-95 yqeG S hydrolase of the HAD superfamily
LNIPHOMF_00342 9.1e-214 yqeH S In Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
LNIPHOMF_00343 2.7e-157 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LNIPHOMF_00344 2.1e-45 yhbY J RNA-binding protein containing KH domain, possibly ribosomal protein
LNIPHOMF_00345 2.7e-108 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LNIPHOMF_00346 7.4e-103 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
LNIPHOMF_00347 6.9e-62 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
LNIPHOMF_00348 2.9e-139 yqeM Q Methyltransferase
LNIPHOMF_00349 8.4e-148 comER E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LNIPHOMF_00350 3e-105 wza L COG1555 DNA uptake protein and related DNA-binding proteins
LNIPHOMF_00351 2.1e-105 comEB 3.5.4.12 F ComE operon protein 2
LNIPHOMF_00352 0.0 comEC S Competence protein ComEC
LNIPHOMF_00353 4.1e-15 S YqzM-like protein
LNIPHOMF_00354 1.1e-189 holA 2.7.7.7 L DNA polymerase III delta subunit
LNIPHOMF_00355 9.7e-37 rpsT J Binds directly to 16S ribosomal RNA
LNIPHOMF_00356 1.3e-204 gpr 3.4.24.78 C Initiates the rapid degradation of small, acid-soluble proteins during spore germination
LNIPHOMF_00357 6.9e-223 spoIIP M stage II sporulation protein P
LNIPHOMF_00358 1e-54 yqxA S Protein of unknown function (DUF3679)
LNIPHOMF_00359 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
LNIPHOMF_00360 4.8e-218 hemN H Involved in the biosynthesis of porphyrin-containing compound
LNIPHOMF_00361 4.7e-188 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
LNIPHOMF_00362 3.8e-75 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LNIPHOMF_00363 0.0 dnaK O Heat shock 70 kDa protein
LNIPHOMF_00364 4.2e-182 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
LNIPHOMF_00365 5.4e-175 prmA J Methylates ribosomal protein L11
LNIPHOMF_00366 1.4e-141 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
LNIPHOMF_00367 2.1e-260 yqeV 2.8.4.5 J ribosomal protein S12 methylthiotransferase
LNIPHOMF_00368 3.5e-158 yqeW P COG1283 Na phosphate symporter
LNIPHOMF_00369 1.2e-19 rpsU J Belongs to the bacterial ribosomal protein bS21 family
LNIPHOMF_00370 2.5e-61 yqeY S Yqey-like protein
LNIPHOMF_00371 5.4e-229 yqeZ O COG1030 Membrane-bound serine protease (ClpP class)
LNIPHOMF_00372 4.3e-122 yqfA S UPF0365 protein
LNIPHOMF_00373 6e-25 yqfB
LNIPHOMF_00374 2.7e-45 yqfC S sporulation protein YqfC
LNIPHOMF_00375 1.5e-185 yqfD 3.1.3.102, 3.1.3.104 S Stage IV sporulation
LNIPHOMF_00376 1.1e-175 phoH T Phosphate starvation-inducible protein PhoH
LNIPHOMF_00378 0.0 yqfF S membrane-associated HD superfamily hydrolase
LNIPHOMF_00379 5.1e-81 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LNIPHOMF_00380 1.6e-61 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
LNIPHOMF_00381 7.1e-71 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
LNIPHOMF_00382 3.1e-167 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LNIPHOMF_00383 8.4e-19 S YqzL-like protein
LNIPHOMF_00384 4.8e-145 recO L Involved in DNA repair and RecF pathway recombination
LNIPHOMF_00385 3.3e-174 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
LNIPHOMF_00386 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
LNIPHOMF_00387 4.5e-112 ccpN K CBS domain
LNIPHOMF_00388 5.8e-149 yqfL 2.7.11.33, 2.7.4.28 S Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
LNIPHOMF_00389 4.5e-88 yaiI S Belongs to the UPF0178 family
LNIPHOMF_00390 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
LNIPHOMF_00391 1.2e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
LNIPHOMF_00392 5.8e-55 S YolD-like protein
LNIPHOMF_00393 4.5e-24
LNIPHOMF_00396 6.4e-60 ynaF
LNIPHOMF_00397 1.9e-123 ynaE S Domain of unknown function (DUF3885)
LNIPHOMF_00398 2e-99 ynaD J Acetyltransferase (GNAT) domain
LNIPHOMF_00399 4.9e-145 ynaC
LNIPHOMF_00400 6.8e-80 G regulation of fungal-type cell wall biogenesis
LNIPHOMF_00401 5.8e-39
LNIPHOMF_00402 2.5e-32
LNIPHOMF_00403 5e-10
LNIPHOMF_00404 7e-261 glnA 6.3.1.2 E glutamine synthetase
LNIPHOMF_00405 1.1e-68 glnR K transcriptional
LNIPHOMF_00406 3.3e-244 ynbB 4.4.1.1 P COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance
LNIPHOMF_00407 5.5e-231 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LNIPHOMF_00408 1.7e-176 spoVK O stage V sporulation protein K
LNIPHOMF_00409 8e-116 cwlC 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
LNIPHOMF_00410 2e-109 ymaB
LNIPHOMF_00411 4.5e-188 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LNIPHOMF_00412 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LNIPHOMF_00413 1.9e-49 nrdI 1.17.4.1 F Probably involved in ribonucleotide reductase function
LNIPHOMF_00414 4.5e-22 ymzA
LNIPHOMF_00415 6.3e-23
LNIPHOMF_00416 9.3e-175 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LNIPHOMF_00417 2.1e-46 ymaF S YmaF family
LNIPHOMF_00419 4.9e-51 ebrA P Small Multidrug Resistance protein
LNIPHOMF_00420 4.7e-55 ebrB P COG2076 Membrane transporters of cations and cationic drugs
LNIPHOMF_00421 5.4e-80 ymaD O redox protein, regulator of disulfide bond formation
LNIPHOMF_00422 2.1e-126 ymaC S Replication protein
LNIPHOMF_00423 4.6e-252 aprX O Belongs to the peptidase S8 family
LNIPHOMF_00424 6.6e-164 ymaE S Metallo-beta-lactamase superfamily
LNIPHOMF_00425 1.2e-61 ymzB
LNIPHOMF_00426 2.5e-233 cypA C Cytochrome P450
LNIPHOMF_00427 0.0 pks13 HQ Beta-ketoacyl synthase
LNIPHOMF_00428 0.0 dhbF IQ polyketide synthase
LNIPHOMF_00429 0.0 pfaA 4.1.1.35 GT4 IQ polyketide synthase
LNIPHOMF_00430 0.0 pfaA Q Polyketide synthase of type I
LNIPHOMF_00431 0.0 rhiB IQ polyketide synthase
LNIPHOMF_00432 1.3e-78 yybN S Protein of unknown function (DUF2712)
LNIPHOMF_00433 4.9e-99 dinB2 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LNIPHOMF_00434 3.7e-19 yoaQ S Evidence 4 Homologs of previously reported genes of
LNIPHOMF_00435 2.4e-278 S COG0457 FOG TPR repeat
LNIPHOMF_00436 0.0 msbA2 3.6.3.44 V ABC transporter
LNIPHOMF_00438 0.0
LNIPHOMF_00439 4.6e-121
LNIPHOMF_00440 8e-114 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E belongs to the PRA-CH family
LNIPHOMF_00441 2.8e-137 hisF E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
LNIPHOMF_00442 3.1e-133 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
LNIPHOMF_00443 1.7e-116 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LNIPHOMF_00444 2.1e-108 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
LNIPHOMF_00445 6.6e-232 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LNIPHOMF_00446 1.5e-115 hisG 2.4.2.17 E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
LNIPHOMF_00447 4.8e-221 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
LNIPHOMF_00448 4.5e-140 yvpB NU protein conserved in bacteria
LNIPHOMF_00449 5.5e-121 hrpW 4.2.2.10, 4.2.2.2 G Pectate lyase
LNIPHOMF_00450 3e-82 yvoF S COG0110 Acetyltransferase (isoleucine patch superfamily)
LNIPHOMF_00451 1.3e-119 ppaX 3.1.3.18, 3.6.1.1 S Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK P. Might play a role in controlling the intracellular pyrophosphate pool
LNIPHOMF_00452 1.5e-164 yvoD P COG0370 Fe2 transport system protein B
LNIPHOMF_00453 4.9e-148 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LNIPHOMF_00454 1.7e-168 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Also phosphorylates dephosphorylates the HPr-like catabolite repression protein crh on a specific serine residue. Therefore, by controlling the phosphorylation state of HPr and crh, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
LNIPHOMF_00455 6.8e-223 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
LNIPHOMF_00456 8.9e-133 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
LNIPHOMF_00457 3.6e-134 yvoA K transcriptional
LNIPHOMF_00458 0.0 yvnB 3.1.4.53 Q Calcineurin-like phosphoesterase
LNIPHOMF_00459 8.5e-84 adcR K helix_turn_helix multiple antibiotic resistance protein
LNIPHOMF_00460 8.2e-232 cypX 1.14.15.13 C Cytochrome P450
LNIPHOMF_00461 1.6e-137 yvmC 2.3.2.22 S Involved in the biosynthesis of pulcherrimin, a red extracellular pigment. It uses activated amino acids in the form of aminoacyl-tRNAs (aa-tRNAs) as substrates to catalyze the ATP- independent formation of cyclodipeptides which are intermediates in diketopiperazine (DKP) biosynthetic pathways. Catalyzes the formation of cyclo(L-Leu-L-Leu) (cLL) from L-leucyl-tRNA(Leu). Can also incorporate various nonpolar residues, such as L- phenylalanine, L-leucine and methionine, into cyclodipeptides
LNIPHOMF_00462 3e-87 yvmB K helix_turn_helix multiple antibiotic resistance protein
LNIPHOMF_00463 2.7e-203 yvmA EGP Major facilitator Superfamily
LNIPHOMF_00464 1.2e-50 yvlD S Membrane
LNIPHOMF_00465 2.6e-26 pspB KT PspC domain
LNIPHOMF_00466 3.4e-168 yvlB S Putative adhesin
LNIPHOMF_00467 8e-49 yvlA
LNIPHOMF_00468 6.7e-34 yvkN
LNIPHOMF_00469 2.9e-79 fliC N Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LNIPHOMF_00470 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
LNIPHOMF_00471 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
LNIPHOMF_00472 1.2e-30 csbA S protein conserved in bacteria
LNIPHOMF_00473 0.0 yvkC 2.7.9.2 GT Phosphotransferase
LNIPHOMF_00474 7e-101 yvkB K Transcriptional regulator
LNIPHOMF_00475 7.9e-228 yvkA EGP Major facilitator Superfamily
LNIPHOMF_00476 2e-180 minJ O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LNIPHOMF_00477 2.5e-53 minJ O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LNIPHOMF_00478 5.3e-56 swrA S Swarming motility protein
LNIPHOMF_00479 6.9e-270 ctpB 3.4.21.102 M Belongs to the peptidase S41A family
LNIPHOMF_00480 1.6e-155 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
LNIPHOMF_00481 1.6e-123 ftsE D cell division ATP-binding protein FtsE
LNIPHOMF_00482 5.3e-56 cccB C COG2010 Cytochrome c, mono- and diheme variants
LNIPHOMF_00483 5.5e-142 yvjA S Uncharacterized protein conserved in bacteria (DUF2179)
LNIPHOMF_00484 6.1e-185 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
LNIPHOMF_00485 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
LNIPHOMF_00486 2.2e-102 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LNIPHOMF_00487 2.8e-66
LNIPHOMF_00488 1.9e-08 fliT S bacterial-type flagellum organization
LNIPHOMF_00489 2.9e-69 fliS N flagellar protein FliS
LNIPHOMF_00490 1.3e-266 fliD N morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
LNIPHOMF_00491 6.1e-57 flaG N flagellar protein FlaG
LNIPHOMF_00492 1.9e-156 fliC N Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LNIPHOMF_00493 2e-30 csrA T Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
LNIPHOMF_00494 2.7e-73 fliW S Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
LNIPHOMF_00495 2.6e-50 yviE
LNIPHOMF_00496 1.1e-156 flgL N Belongs to the bacterial flagellin family
LNIPHOMF_00497 1.2e-264 flgK N flagellar hook-associated protein
LNIPHOMF_00498 2.4e-78 flgN NOU FlgN protein
LNIPHOMF_00499 4.2e-40 flgM KNU Negative regulator of flagellin synthesis
LNIPHOMF_00500 7e-74 yvyF S flagellar protein
LNIPHOMF_00501 2.7e-129 comFC S Phosphoribosyl transferase domain
LNIPHOMF_00502 5.7e-46 comFB S Late competence development protein ComFB
LNIPHOMF_00503 5.6e-269 comFA L COG4098 Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
LNIPHOMF_00504 7.3e-155 degV S protein conserved in bacteria
LNIPHOMF_00505 2e-126 degU KT COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
LNIPHOMF_00506 5.1e-183 degS 2.7.13.3 T Member of the two-component regulatory system DegS DegU, which plays an important role in the transition growth phase
LNIPHOMF_00507 2e-120 yvyE 3.4.13.9 S Domain of unknown function (DUF1949)
LNIPHOMF_00508 6e-163 yvhJ K Transcriptional regulator
LNIPHOMF_00509 2.6e-181 tagO 2.7.8.33, 2.7.8.35 M COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase UDP-N-acetylglucosamine-1-phosphate transferase
LNIPHOMF_00510 4.4e-238 tuaH M Teichuronic acid biosynthesis glycosyltransferase tuaH
LNIPHOMF_00511 2.1e-145 tuaG GT2 M Glycosyltransferase like family 2
LNIPHOMF_00512 6e-115 tuaF M protein involved in exopolysaccharide biosynthesis
LNIPHOMF_00513 1.7e-263 tuaE M Teichuronic acid biosynthesis protein
LNIPHOMF_00514 2.4e-259 tuaD 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
LNIPHOMF_00515 7.4e-222 tuaC 2.4.1.21, 3.2.1.1 GH13,GT4,GT5 GM Teichuronic acid
LNIPHOMF_00516 3.3e-248 wzxC S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
LNIPHOMF_00517 4.6e-112 tuaA M COG2148 Sugar transferases involved in lipopolysaccharide synthesis
LNIPHOMF_00518 3e-268 lytC 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
LNIPHOMF_00519 0.0 lytB 3.5.1.28 D Stage II sporulation protein
LNIPHOMF_00520 6e-38
LNIPHOMF_00521 6.1e-163 lytR K May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG)
LNIPHOMF_00522 8.2e-218 mnaA 5.1.3.14 M Belongs to the UDP-N-acetylglucosamine 2-epimerase family
LNIPHOMF_00523 0.0 srfAA Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LNIPHOMF_00524 0.0 srfAB Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LNIPHOMF_00525 0.0 srfAC Q COG1020 Non-ribosomal peptide synthetase modules and related proteins
LNIPHOMF_00526 5.7e-140 srfAD Q thioesterase
LNIPHOMF_00527 4.2e-228 EGP Major Facilitator Superfamily
LNIPHOMF_00528 4.9e-91 S YcxB-like protein
LNIPHOMF_00529 7.4e-164 ycxC EG EamA-like transporter family
LNIPHOMF_00530 4.4e-255 ycxD K GntR family transcriptional regulator
LNIPHOMF_00531 5.5e-113 acpT 2.7.8.7 H Belongs to the P-Pant transferase superfamily
LNIPHOMF_00532 4.4e-115 yczE S membrane
LNIPHOMF_00533 2.8e-134 tcyC 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
LNIPHOMF_00534 6.2e-123 tcyB P COG0765 ABC-type amino acid transport system, permease component
LNIPHOMF_00535 1.5e-141 tcyA ET Belongs to the bacterial solute-binding protein 3 family
LNIPHOMF_00536 4.9e-162 bsdA K LysR substrate binding domain
LNIPHOMF_00537 2e-109 ubiX 2.5.1.129 H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
LNIPHOMF_00538 1.8e-283 yclC 4.1.1.61 H Decarboxylase involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions. It is able to catalyze the reversible decarboxylation of 4-hydroxybenzoate
LNIPHOMF_00539 4e-39 bsdD 4.1.1.61 S response to toxic substance
LNIPHOMF_00540 1.1e-83 yclD
LNIPHOMF_00541 6.2e-162 yclE 3.4.11.5 S Alpha beta hydrolase
LNIPHOMF_00542 1.5e-267 dtpT E amino acid peptide transporter
LNIPHOMF_00543 2.9e-310 yclG M Pectate lyase superfamily protein
LNIPHOMF_00545 6.8e-282 gerKA EG Spore germination protein
LNIPHOMF_00546 1.3e-232 gerKC S spore germination
LNIPHOMF_00547 9.9e-200 gerKB F Spore germination protein
LNIPHOMF_00548 3.9e-122 yclH P ABC transporter
LNIPHOMF_00549 1.7e-204 yclI V ABC transporter (permease) YclI
LNIPHOMF_00550 1.4e-127 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LNIPHOMF_00551 1.8e-262 yclK 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
LNIPHOMF_00552 5.2e-71 S aspartate phosphatase
LNIPHOMF_00556 7.5e-242 lysC 2.7.2.4 E Belongs to the aspartokinase family
LNIPHOMF_00557 1.6e-161 yclN P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNIPHOMF_00558 2.6e-164 fatC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNIPHOMF_00559 4.7e-137 yclP 3.6.3.34 P ABC transporter, ATP-binding protein
LNIPHOMF_00560 5.5e-175 yclQ P COG4607 ABC-type enterochelin transport system, periplasmic component
LNIPHOMF_00561 1.4e-251 ycnB EGP Major facilitator Superfamily
LNIPHOMF_00562 6.5e-154 ycnC K Transcriptional regulator
LNIPHOMF_00563 4.4e-135 nfrA2 1.5.1.38, 1.5.1.39 C Oxidoreductase
LNIPHOMF_00564 1.6e-45 ycnE S Monooxygenase
LNIPHOMF_00565 2.2e-51 yczG K helix_turn_helix, Arsenical Resistance Operon Repressor
LNIPHOMF_00566 1.3e-273 gabR K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
LNIPHOMF_00567 4.4e-247 gabT 2.6.1.19, 2.6.1.22 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LNIPHOMF_00568 3.4e-266 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
LNIPHOMF_00569 6.1e-149 glcU U Glucose uptake
LNIPHOMF_00570 9.9e-146 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LNIPHOMF_00571 1.3e-100 ycnI S protein conserved in bacteria
LNIPHOMF_00572 1.4e-308 ycnJ P protein, homolog of Cu resistance protein CopC
LNIPHOMF_00573 1.7e-107 ycnK K COG1349 Transcriptional regulators of sugar metabolism
LNIPHOMF_00574 7.3e-56
LNIPHOMF_00575 5.6e-240 mtlA 2.7.1.197 G COG2213 Phosphotransferase system, mannitol-specific IIBC component
LNIPHOMF_00576 2e-71 mtlF 2.7.1.197 G COG4668 Mannitol fructose-specific phosphotransferase system, IIA domain
LNIPHOMF_00577 7.3e-211 mtlD 1.1.1.17 G COG0246 Mannitol-1-phosphate altronate dehydrogenases
LNIPHOMF_00578 3.8e-201 ycsA 1.1.1.83, 1.1.1.93, 4.1.1.73 CE Tartrate dehydrogenase
LNIPHOMF_00579 3.2e-10 sipT 3.4.21.89 U Belongs to the peptidase S26 family
LNIPHOMF_00580 7.6e-76 sipT 3.4.21.89 U Belongs to the peptidase S26 family
LNIPHOMF_00581 5e-113 M1-673 3.1.1.45 Q COG0412 Dienelactone hydrolase and related enzymes
LNIPHOMF_00582 5.4e-68 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
LNIPHOMF_00584 8e-137 ycsE 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
LNIPHOMF_00585 1.2e-140 ycsF S Belongs to the UPF0271 (lamB) family
LNIPHOMF_00586 6.5e-213 ycsG P COG1914 Mn2 and Fe2 transporters of the NRAMP family
LNIPHOMF_00587 9.6e-149 ycsI S Belongs to the D-glutamate cyclase family
LNIPHOMF_00588 1.9e-135 kipI 3.5.1.54 E Allophanate hydrolase subunit 1
LNIPHOMF_00589 5.1e-187 kipA 6.3.4.6 E Allophanate hydrolase subunit 2
LNIPHOMF_00590 1.2e-132 kipR K Transcriptional regulator
LNIPHOMF_00591 9.9e-120 ycsK E anatomical structure formation involved in morphogenesis
LNIPHOMF_00593 1.4e-49 yczJ S biosynthesis
LNIPHOMF_00594 0.0 pbpC 3.4.16.4 M Penicillin-binding Protein
LNIPHOMF_00595 2.8e-176 ydhF S Oxidoreductase
LNIPHOMF_00596 0.0 mtlR K transcriptional regulator, MtlR
LNIPHOMF_00597 1.4e-294 ydaB IQ acyl-CoA ligase
LNIPHOMF_00598 1.1e-99 ydaC Q Methyltransferase domain
LNIPHOMF_00599 1.4e-161 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LNIPHOMF_00600 1.2e-96 MA20_27600 5.3.1.15 S Cupin 2, conserved barrel domain protein
LNIPHOMF_00601 5e-104 rimL 1.1.1.25 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
LNIPHOMF_00602 6.8e-77 ydaG 1.4.3.5 S general stress protein
LNIPHOMF_00603 5.4e-36 yoqW S Belongs to the SOS response-associated peptidase family
LNIPHOMF_00604 3.6e-51
LNIPHOMF_00605 0.0 bglF 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
LNIPHOMF_00606 6.5e-281 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LNIPHOMF_00607 1.1e-72 yxiE T Belongs to the universal stress protein A family
LNIPHOMF_00608 2.9e-168 yxxF EG EamA-like transporter family
LNIPHOMF_00609 0.0 wapA M COG3209 Rhs family protein
LNIPHOMF_00610 1.5e-71 yxxG
LNIPHOMF_00611 1.7e-84
LNIPHOMF_00612 6.4e-63
LNIPHOMF_00613 3.7e-75 yxiG
LNIPHOMF_00614 4.9e-46
LNIPHOMF_00615 3.8e-81
LNIPHOMF_00616 1.2e-96 yxiI S Protein of unknown function (DUF2716)
LNIPHOMF_00617 1.6e-48 yxiJ S YxiJ-like protein
LNIPHOMF_00620 7.5e-219 3.2.1.14 GH18 E GDSL-like Lipase/Acylhydrolase
LNIPHOMF_00621 1e-265 dbpA 3.6.4.13 JKL DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes
LNIPHOMF_00622 3e-232 yxiO S COG2270 Permeases of the major facilitator superfamily
LNIPHOMF_00623 6.6e-114
LNIPHOMF_00624 8.3e-151 licT K transcriptional antiterminator
LNIPHOMF_00625 5e-144 exoK GH16 M licheninase activity
LNIPHOMF_00626 6.6e-224 citH C Citrate transporter
LNIPHOMF_00627 0.0 katE 1.11.1.6, 3.5.1.124 P serves to protect cells from the toxic effects of hydrogen peroxide
LNIPHOMF_00628 2.7e-48 yxiS
LNIPHOMF_00629 1.2e-22 T Domain of unknown function (DUF4163)
LNIPHOMF_00630 1.9e-212 nupG F Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LNIPHOMF_00631 3.1e-161 rlmA 2.1.1.187 Q Methyltransferase domain
LNIPHOMF_00632 2.6e-253 yxjC EG COG2610 H gluconate symporter and related permeases
LNIPHOMF_00633 1.4e-130 scoA 2.8.3.5 I COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LNIPHOMF_00634 5.2e-116 scoB 2.8.3.5 I COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
LNIPHOMF_00635 1.3e-137 IQ Catalyzes the formation of acetoacetate from 3-hydroxybutyrate
LNIPHOMF_00636 1e-220 yxjG 2.1.1.14 E Methionine synthase
LNIPHOMF_00637 5.5e-222 yxjG 2.1.1.14 E Methionine synthase
LNIPHOMF_00638 1e-87 yxjI S LURP-one-related
LNIPHOMF_00641 3.6e-235 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
LNIPHOMF_00642 8.9e-116 K helix_turn_helix, Lux Regulon
LNIPHOMF_00643 1.5e-193 yxjM T Signal transduction histidine kinase
LNIPHOMF_00644 2.4e-78 S Protein of unknown function (DUF1453)
LNIPHOMF_00645 1.9e-166 yxjO K LysR substrate binding domain
LNIPHOMF_00646 1.3e-95 yxkA S Phosphatidylethanolamine-binding protein
LNIPHOMF_00647 4.6e-196 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
LNIPHOMF_00648 4.1e-73 yxkC S Domain of unknown function (DUF4352)
LNIPHOMF_00649 1.9e-147 yxkD S Uncharacterised 5xTM membrane BCR, YitT family COG1284
LNIPHOMF_00650 2.5e-275 aldY 1.2.1.3 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
LNIPHOMF_00651 4.8e-165 lrp QT PucR C-terminal helix-turn-helix domain
LNIPHOMF_00652 5.9e-205 msmK P Belongs to the ABC transporter superfamily
LNIPHOMF_00653 3e-156 yxkH G Polysaccharide deacetylase
LNIPHOMF_00655 0.0 3.4.24.84 O Peptidase family M48
LNIPHOMF_00656 1.5e-229 cimH C COG3493 Na citrate symporter
LNIPHOMF_00657 1.3e-268 cydA 1.10.3.14 C oxidase, subunit
LNIPHOMF_00658 2.9e-190 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase, subunit II
LNIPHOMF_00659 0.0 cydD V ATP-binding
LNIPHOMF_00660 0.0 cydD V ATP-binding protein
LNIPHOMF_00661 8e-162 nnrD 4.2.1.136, 5.1.99.6 G Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LNIPHOMF_00662 2.3e-254 yxlA F Belongs to the purine-cytosine permease (2.A.39) family
LNIPHOMF_00663 4.7e-91 sigY K Belongs to the sigma-70 factor family. ECF subfamily
LNIPHOMF_00664 3.9e-48 yxlC S Family of unknown function (DUF5345)
LNIPHOMF_00665 1.2e-31
LNIPHOMF_00666 7.6e-28 yxlE S Phospholipase_D-nuclease N-terminal
LNIPHOMF_00667 5.1e-167 yxlF V ABC transporter, ATP-binding protein
LNIPHOMF_00668 1.8e-139 yxlG S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
LNIPHOMF_00669 2.1e-216 yxlH EGP Major facilitator Superfamily
LNIPHOMF_00670 0.0 katX 1.11.1.6 P serves to protect cells from the toxic effects of hydrogen peroxide
LNIPHOMF_00671 1e-110 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
LNIPHOMF_00672 1.1e-19 yxzF
LNIPHOMF_00673 0.0 licR 2.7.1.202 GKT Mga helix-turn-helix domain
LNIPHOMF_00674 2.3e-50 licB 2.7.1.196, 2.7.1.205 G transporter subunit IIB
LNIPHOMF_00675 7.4e-250 licC G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LNIPHOMF_00676 6.7e-38 licA 2.7.1.196, 2.7.1.205 G phosphotransferase system
LNIPHOMF_00677 1.1e-253 licH 3.2.1.86 GT4 G COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
LNIPHOMF_00678 3.1e-206 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
LNIPHOMF_00679 6.6e-139 dltE M Belongs to the short-chain dehydrogenases reductases (SDR) family
LNIPHOMF_00680 2.3e-231 dltD M COG3966 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
LNIPHOMF_00681 1.5e-36 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LNIPHOMF_00682 1.2e-232 dltB M membrane protein involved in D-alanine export
LNIPHOMF_00683 7.9e-293 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LNIPHOMF_00684 5.4e-167 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
LNIPHOMF_00685 5e-116 ywaC 2.7.6.5 S protein conserved in bacteria
LNIPHOMF_00686 2.4e-59 ywaD 3.4.11.10, 3.4.11.6 S PA domain
LNIPHOMF_00687 1.2e-205 msmX P Belongs to the ABC transporter superfamily
LNIPHOMF_00688 1.1e-135 yurK K UTRA
LNIPHOMF_00689 1.5e-163 yurL 2.7.1.218 G pfkB family carbohydrate kinase
LNIPHOMF_00690 7.3e-169 yurM P COG0395 ABC-type sugar transport system, permease component
LNIPHOMF_00691 1.4e-156 yurN G Binding-protein-dependent transport system inner membrane component
LNIPHOMF_00692 1.3e-240 yurO G COG1653 ABC-type sugar transport system, periplasmic component
LNIPHOMF_00693 1.8e-184 frlB M Catalyzes the conversion of a range of fructosamine 6- phosphates to glucose 6-phosphate and a free amino acid
LNIPHOMF_00694 2.8e-66 yurQ 2.7.7.7 L COG0322 Nuclease subunit of the excinuclease complex
LNIPHOMF_00695 1.8e-209 yurR 1.4.5.1 E COG0665 Glycine D-amino acid oxidases (deaminating)
LNIPHOMF_00697 1e-41
LNIPHOMF_00698 7.6e-67 yurT E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LNIPHOMF_00699 3.5e-271 sufB O FeS cluster assembly
LNIPHOMF_00700 1.4e-77 nifU C COG0822 NifU homolog involved in Fe-S cluster formation
LNIPHOMF_00701 9.4e-236 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LNIPHOMF_00702 1.4e-245 sufD O assembly protein SufD
LNIPHOMF_00703 2.3e-142 sufC O COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component
LNIPHOMF_00704 1.1e-62 yurZ 2.3.1.12, 4.1.1.44 S Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LNIPHOMF_00705 1.9e-147 metQ P Belongs to the NlpA lipoprotein family
LNIPHOMF_00706 1.4e-95 metI P COG2011 ABC-type metal ion transport system, permease component
LNIPHOMF_00707 4.8e-185 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LNIPHOMF_00708 2.4e-56 yusD S SCP-2 sterol transfer family
LNIPHOMF_00709 5.6e-55 traF CO Thioredoxin
LNIPHOMF_00710 3.3e-74 rnmV 3.1.26.8 L COG1658 Small primase-like proteins (Toprim domain)
LNIPHOMF_00711 1.1e-39 yusG S Protein of unknown function (DUF2553)
LNIPHOMF_00712 9.3e-65 gcvH E Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate
LNIPHOMF_00713 2.8e-63 arsC 1.20.4.1 P Belongs to the ArsC family
LNIPHOMF_00714 0.0 fadE 1.3.8.1 I acyl-CoA dehydrogenase
LNIPHOMF_00715 1.4e-217 fadA 2.3.1.16 I Belongs to the thiolase family
LNIPHOMF_00716 0.0 fadB 1.1.1.35, 4.2.1.17, 5.1.2.3 I 3-hydroxyacyl-CoA dehydrogenase
LNIPHOMF_00717 4.7e-09 S YuzL-like protein
LNIPHOMF_00718 2.2e-165 fadM E Proline dehydrogenase
LNIPHOMF_00719 5.1e-40
LNIPHOMF_00720 3.2e-53 yusN M Coat F domain
LNIPHOMF_00721 5.4e-75 yusO K Iron dependent repressor, N-terminal DNA binding domain
LNIPHOMF_00722 3.8e-293 yusP P Major facilitator superfamily
LNIPHOMF_00723 8.4e-66 yusQ S Tautomerase enzyme
LNIPHOMF_00724 2.7e-55 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
LNIPHOMF_00725 2.5e-50 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
LNIPHOMF_00726 2.7e-160 yusT K LysR substrate binding domain
LNIPHOMF_00727 3.8e-47 yusU S Protein of unknown function (DUF2573)
LNIPHOMF_00728 1e-153 yusV 3.6.3.34 HP ABC transporter
LNIPHOMF_00729 5.6e-66 S YusW-like protein
LNIPHOMF_00730 6.3e-258 pepF2 E COG1164 Oligoendopeptidase F
LNIPHOMF_00731 3.9e-34 pepF2 E COG1164 Oligoendopeptidase F
LNIPHOMF_00732 4.7e-154 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
LNIPHOMF_00733 1.2e-79 dps P Ferritin-like domain
LNIPHOMF_00734 9.6e-237 htrA 3.4.21.107 O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LNIPHOMF_00735 3.4e-126 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LNIPHOMF_00736 4.3e-250 cssS 2.7.13.3 T PhoQ Sensor
LNIPHOMF_00737 4.3e-158 yuxN K Transcriptional regulator
LNIPHOMF_00738 2.5e-261 fumC 1.1.1.38, 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
LNIPHOMF_00739 2.3e-24 S Protein of unknown function (DUF3970)
LNIPHOMF_00740 2.2e-247 gerAA EG Spore germination protein
LNIPHOMF_00741 9.1e-198 gerAB E Spore germination protein
LNIPHOMF_00742 4.6e-189 gerAC S Spore germination B3/ GerAC like, C-terminal
LNIPHOMF_00743 1.3e-108 vraR KT COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
LNIPHOMF_00744 5.5e-187 vraS 2.7.13.3 T Histidine kinase
LNIPHOMF_00745 5.6e-127 yvqF S Cell wall-active antibiotics response 4TMS YvqF
LNIPHOMF_00746 9.3e-129 liaG S Putative adhesin
LNIPHOMF_00747 2.5e-105 liaH KT COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription
LNIPHOMF_00748 5.6e-62 liaI S membrane
LNIPHOMF_00749 4.8e-227 yvqJ EGP Major facilitator Superfamily
LNIPHOMF_00750 6.5e-102 yvqK 2.5.1.17 S Adenosyltransferase
LNIPHOMF_00751 2.8e-249 yvrA 3.6.3.34 HP COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
LNIPHOMF_00752 7.7e-186 btuC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNIPHOMF_00753 1.8e-170 yvrC P COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
LNIPHOMF_00754 6.2e-140 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
LNIPHOMF_00755 1.5e-171 yvrE G SMP-30/Gluconolaconase/LRE-like region
LNIPHOMF_00756 0.0 T PhoQ Sensor
LNIPHOMF_00757 3.2e-131 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LNIPHOMF_00758 3.6e-22
LNIPHOMF_00759 1.8e-96 yvrI K RNA polymerase
LNIPHOMF_00760 2.4e-19 S YvrJ protein family
LNIPHOMF_00761 7.3e-230 oxdC 4.1.1.2 G Oxalate decarboxylase
LNIPHOMF_00762 1.3e-64 yvrL S Regulatory protein YrvL
LNIPHOMF_00763 1.8e-210 yvrN V COG0577 ABC-type antimicrobial peptide transport system, permease component
LNIPHOMF_00764 7.1e-124 macB V ABC transporter, ATP-binding protein
LNIPHOMF_00765 4.8e-176 M Efflux transporter rnd family, mfp subunit
LNIPHOMF_00766 4.4e-149 fhuC 3.6.3.34 HP ABC transporter
LNIPHOMF_00767 5.3e-176 fhuG P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNIPHOMF_00768 9.3e-184 fhuB P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNIPHOMF_00769 2.1e-179 fhuD P ABC transporter
LNIPHOMF_00771 2.6e-237 yvsH E Arginine ornithine antiporter
LNIPHOMF_00772 6.5e-16 S Small spore protein J (Spore_SspJ)
LNIPHOMF_00773 1e-84 yvsG S LexA-binding, inner membrane-associated putative hydrolase
LNIPHOMF_00774 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
LNIPHOMF_00775 8e-171 yvgK P COG1910 Periplasmic molybdate-binding protein domain
LNIPHOMF_00776 5.8e-138 modA P COG0725 ABC-type molybdate transport system, periplasmic component
LNIPHOMF_00777 4.7e-120 modB P COG4149 ABC-type molybdate transport system, permease component
LNIPHOMF_00778 9.1e-158 yvgN S reductase
LNIPHOMF_00779 5.4e-86 yvgO
LNIPHOMF_00780 1.3e-81 mhqR K transcriptional
LNIPHOMF_00781 2.3e-220 ugtP 2.4.1.315 GT28 M COG0707 UDP-N-acetylglucosamine LPS N-acetylglucosamine transferase
LNIPHOMF_00782 3.7e-99 ykoP G polysaccharide deacetylase
LNIPHOMF_00783 7.1e-155 ykoQ S Calcineurin-like phosphoesterase superfamily domain
LNIPHOMF_00784 0.0 ykoS
LNIPHOMF_00785 2.5e-186 ykoT GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
LNIPHOMF_00786 0.0 ligD 6.5.1.1 L ATP-dependent DNA ligase
LNIPHOMF_00787 3.2e-161 ku L With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
LNIPHOMF_00788 0.0 ydcR 2.7.7.65 T Diguanylate cyclase
LNIPHOMF_00789 1.4e-116 ykoX S membrane-associated protein
LNIPHOMF_00790 2.1e-177 ykoY P COG0861 Membrane protein TerC, possibly involved in tellurium resistance
LNIPHOMF_00791 9.5e-130 sigI K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LNIPHOMF_00792 8.2e-117 rsgI S Anti-sigma factor N-terminus
LNIPHOMF_00793 1.9e-26 sspD S small acid-soluble spore protein
LNIPHOMF_00794 1.5e-124 ykrK S Domain of unknown function (DUF1836)
LNIPHOMF_00795 7e-156 htpX O Belongs to the peptidase M48B family
LNIPHOMF_00796 1.7e-233 ktrB P COG0168 Trk-type K transport systems, membrane components
LNIPHOMF_00797 1.2e-10 ydfR S Protein of unknown function (DUF421)
LNIPHOMF_00798 4.5e-22 ykzE
LNIPHOMF_00799 6.5e-190 ykrP G COG3594 Fucose 4-O-acetylase and related acetyltransferases
LNIPHOMF_00800 0.0 kinE 2.7.13.3 T Histidine kinase
LNIPHOMF_00801 7e-89 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LNIPHOMF_00803 3.3e-197 mtnA 5.3.1.23 E Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
LNIPHOMF_00804 7.5e-230 mtnK 2.7.1.100 F Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
LNIPHOMF_00805 3.5e-151 mtnU 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
LNIPHOMF_00806 8e-232 mtnE 2.6.1.83 E Aminotransferase
LNIPHOMF_00807 4.1e-231 mtnW 5.3.2.5 G Catalyzes the enolization of 2,3-diketo-5- methylthiopentyl-1-phosphate (DK-MTP-1-P) into 2-hydroxy-3-keto-5- methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P)
LNIPHOMF_00808 7.5e-137 mtnX 3.1.3.87, 4.2.1.109 E Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
LNIPHOMF_00809 7.2e-115 mtnB 3.1.3.87, 4.1.2.17, 4.2.1.109, 5.1.3.4 E Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P)
LNIPHOMF_00810 1.3e-96 mtnD 1.13.11.53, 1.13.11.54 S Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
LNIPHOMF_00811 1.3e-51 XK27_09985 S Protein of unknown function (DUF1232)
LNIPHOMF_00812 6.4e-09 S Spo0E like sporulation regulatory protein
LNIPHOMF_00813 1.4e-64 eag
LNIPHOMF_00814 2.5e-275 kinD 2.7.13.3 T COG0642 Signal transduction histidine kinase
LNIPHOMF_00815 1.3e-75 ykvE K transcriptional
LNIPHOMF_00816 2.5e-125 motB N Flagellar motor protein
LNIPHOMF_00817 2.7e-138 motA N flagellar motor
LNIPHOMF_00818 0.0 clpE O Belongs to the ClpA ClpB family
LNIPHOMF_00819 8.7e-182 ykvI S membrane
LNIPHOMF_00820 7.3e-126 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
LNIPHOMF_00821 2.8e-81 queD 4.1.2.50, 4.2.3.12 H synthase
LNIPHOMF_00822 1.3e-139 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
LNIPHOMF_00823 2e-96 queF 1.7.1.13 S Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
LNIPHOMF_00824 2e-61 ykvN K Transcriptional regulator
LNIPHOMF_00825 8.2e-134 IQ Enoyl-(Acyl carrier protein) reductase
LNIPHOMF_00826 4e-217 ykvP 3.5.1.28 M Glycosyl transferases group 1
LNIPHOMF_00827 1.2e-35 3.5.1.104 M LysM domain
LNIPHOMF_00828 8.5e-133 G Glycosyl hydrolases family 18
LNIPHOMF_00829 5.6e-46 ykvR S Protein of unknown function (DUF3219)
LNIPHOMF_00830 6e-25 ykvS S protein conserved in bacteria
LNIPHOMF_00831 2.8e-28
LNIPHOMF_00832 1.7e-103 ykvT 3.5.1.28 M Cell Wall Hydrolase
LNIPHOMF_00833 9.9e-239 ykvU S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
LNIPHOMF_00834 4.9e-90 stoA CO thiol-disulfide
LNIPHOMF_00835 4e-09 cadA 3.6.3.3, 3.6.3.5 P COG2217 Cation transport ATPase
LNIPHOMF_00836 0.0 cadA 3.6.3.3, 3.6.3.5 P COG2217 Cation transport ATPase
LNIPHOMF_00837 3.8e-09
LNIPHOMF_00838 8.7e-209 pepQ 3.4.13.9 E COG0006 Xaa-Pro aminopeptidase
LNIPHOMF_00840 9.8e-180 ykvZ 5.1.1.1 K Transcriptional regulator
LNIPHOMF_00842 4.5e-128 glcT K antiterminator
LNIPHOMF_00843 0.0 ptsG 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
LNIPHOMF_00844 2.1e-39 ptsH G phosphocarrier protein HPr
LNIPHOMF_00845 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LNIPHOMF_00846 7.2e-39 splA S Transcriptional regulator
LNIPHOMF_00847 2.6e-202 splB 4.1.99.14 L Spore photoproduct lyase
LNIPHOMF_00848 1.2e-131 ykwB 2.3.1.1 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LNIPHOMF_00849 2e-264 mcpC NT chemotaxis protein
LNIPHOMF_00850 5e-159 glxR 1.1.1.31, 1.1.1.60 I COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
LNIPHOMF_00851 8e-124 ykwD J protein with SCP PR1 domains
LNIPHOMF_00852 0.0 mrdA 3.4.16.4 M Penicillin-binding Protein
LNIPHOMF_00853 0.0 pilS 2.7.13.3 T Histidine kinase
LNIPHOMF_00854 8e-224 patA 2.6.1.1 E Aminotransferase
LNIPHOMF_00855 2.2e-15
LNIPHOMF_00856 1.6e-168 cheV 2.7.13.3 T Chemotaxis protein CheV
LNIPHOMF_00857 1.7e-84 ykyB S YkyB-like protein
LNIPHOMF_00858 1.6e-238 ykuC EGP Major facilitator Superfamily
LNIPHOMF_00859 4.6e-88 ykuD S protein conserved in bacteria
LNIPHOMF_00860 9.4e-166 ykuE S Metallophosphoesterase
LNIPHOMF_00861 2.2e-142 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LNIPHOMF_00866 1.4e-10 K Cro/C1-type HTH DNA-binding domain
LNIPHOMF_00867 3.6e-108 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
LNIPHOMF_00869 2.5e-63 4.2.1.115 GM Polysaccharide biosynthesis protein
LNIPHOMF_00870 3.6e-213 phy 3.1.3.8 I Myo-inositol-hexaphosphate 3-phosphohydrolase
LNIPHOMF_00871 3.3e-188 cgeB S Spore maturation protein
LNIPHOMF_00872 1.2e-65 cgeA
LNIPHOMF_00873 3.5e-38 cgeC
LNIPHOMF_00874 1e-256 cgeD M maturation of the outermost layer of the spore
LNIPHOMF_00875 2.9e-145 yiiD K acetyltransferase
LNIPHOMF_00878 1.6e-249 yodT H Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LNIPHOMF_00879 8.1e-10 yodS 2.8.3.8, 2.8.3.9 I COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LNIPHOMF_00880 1.6e-117 scoB 2.8.3.5, 2.8.3.8, 2.8.3.9 I COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
LNIPHOMF_00881 1.4e-258 yodQ 3.5.1.16 E Acetylornithine deacetylase
LNIPHOMF_00882 2.5e-155 yodP 2.3.1.264 K Acetyltransferase (GNAT) family
LNIPHOMF_00883 1.4e-278 kamA 5.4.3.2 E lysine 2,3-aminomutase
LNIPHOMF_00884 2.9e-47 yokU S YokU-like protein, putative antitoxin
LNIPHOMF_00885 1.4e-36 yozE S Belongs to the UPF0346 family
LNIPHOMF_00886 1.4e-124 yodN
LNIPHOMF_00888 2.8e-24 yozD S YozD-like protein
LNIPHOMF_00889 5.4e-107 yodM 3.6.1.27 I Acid phosphatase homologues
LNIPHOMF_00890 3.6e-54 yodL S YodL-like
LNIPHOMF_00891 5.3e-09
LNIPHOMF_00892 3.2e-127 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
LNIPHOMF_00893 2.5e-139 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
LNIPHOMF_00894 5.2e-24 yodI
LNIPHOMF_00895 1.7e-128 yodH Q Methyltransferase
LNIPHOMF_00896 1.9e-253 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
LNIPHOMF_00897 4.2e-270 yodF E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LNIPHOMF_00898 6.2e-28 S Protein of unknown function (DUF3311)
LNIPHOMF_00899 5.8e-174 yodE E COG0346 Lactoylglutathione lyase and related lyases
LNIPHOMF_00900 3.8e-113 mhqD S Carboxylesterase
LNIPHOMF_00901 4.8e-108 yodC C nitroreductase
LNIPHOMF_00902 1.7e-57 yodB K transcriptional
LNIPHOMF_00903 3.8e-66 yodA S tautomerase
LNIPHOMF_00904 8.2e-209 gntP EG COG2610 H gluconate symporter and related permeases
LNIPHOMF_00905 3.4e-09
LNIPHOMF_00906 2.6e-61 yozR S COG0071 Molecular chaperone (small heat shock protein)
LNIPHOMF_00907 3.5e-163 rarD S -transporter
LNIPHOMF_00908 1.5e-43
LNIPHOMF_00909 2.2e-60 yojF S Protein of unknown function (DUF1806)
LNIPHOMF_00910 2.1e-125 yojG S deacetylase
LNIPHOMF_00911 8.4e-151 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
LNIPHOMF_00912 4.2e-245 norM V Multidrug efflux pump
LNIPHOMF_00914 1.2e-109 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
LNIPHOMF_00915 1.8e-231 yojK CG UDP-glucoronosyl and UDP-glucosyl transferase
LNIPHOMF_00916 1.6e-198 sle1 3.5.1.28 CBM50 M COG1388 FOG LysM repeat
LNIPHOMF_00917 1e-110 sodC 1.15.1.1 P Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LNIPHOMF_00918 1.1e-161 yojN S ATPase family associated with various cellular activities (AAA)
LNIPHOMF_00919 0.0 yojO P Von Willebrand factor
LNIPHOMF_00920 0.0 sucA 1.2.4.2, 4.1.1.71 C The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components 2- oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3)
LNIPHOMF_00921 1.8e-194 sucB 2.3.1.61 C The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2)
LNIPHOMF_00922 5.1e-168 yocS S -transporter
LNIPHOMF_00923 3.4e-231 yocR S Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
LNIPHOMF_00924 5.4e-166 sodA 1.15.1.1 P Superoxide dismutase
LNIPHOMF_00925 0.0 sqhC 4.2.1.137, 5.4.99.7 I COG1657 Squalene cyclase
LNIPHOMF_00926 4e-289 dhaS 1.2.1.3, 1.2.1.39 C Belongs to the aldehyde dehydrogenase family
LNIPHOMF_00927 2.7e-31 yozC
LNIPHOMF_00928 4.2e-56 yozO S Bacterial PH domain
LNIPHOMF_00929 1.9e-36 yocN
LNIPHOMF_00930 1.1e-40 yozN
LNIPHOMF_00931 1.3e-87 yocM O Belongs to the small heat shock protein (HSP20) family
LNIPHOMF_00932 6.6e-34
LNIPHOMF_00933 6.4e-54 yocL
LNIPHOMF_00934 3.3e-83 dksA T general stress protein
LNIPHOMF_00935 7.9e-114 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LNIPHOMF_00936 0.0 recQ 3.6.4.12 L DNA helicase
LNIPHOMF_00937 7.1e-113 yocH CBM50 M COG1388 FOG LysM repeat
LNIPHOMF_00938 1e-105 desR T COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
LNIPHOMF_00939 3.2e-198 desK 2.7.13.3 T Histidine kinase
LNIPHOMF_00940 4.1e-203 des 1.14.19.23, 1.14.19.45 I fatty acid desaturase
LNIPHOMF_00941 6.9e-189 yocD 3.4.17.13 V peptidase S66
LNIPHOMF_00942 1.9e-94 yocC
LNIPHOMF_00943 2.2e-145
LNIPHOMF_00944 1.5e-92 yozB S membrane
LNIPHOMF_00945 4.4e-118 pvaA M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
LNIPHOMF_00946 1e-51 czrA K transcriptional
LNIPHOMF_00947 2.5e-95 yobW
LNIPHOMF_00948 9e-178 yobV K WYL domain
LNIPHOMF_00949 1.5e-88 yobU K Bacterial transcription activator, effector binding domain
LNIPHOMF_00950 4.2e-132 yobT S COG0491 Zn-dependent hydrolases, including glyoxylases
LNIPHOMF_00951 3e-99 yobS K Transcriptional regulator
LNIPHOMF_00952 2.5e-143 yobR 2.3.1.1 J FR47-like protein
LNIPHOMF_00953 1e-136 yobQ K helix_turn_helix, arabinose operon control protein
LNIPHOMF_00954 9.9e-55 csaA 6.1.1.10, 6.1.1.20, 6.1.1.6 J tRNA-binding protein
LNIPHOMF_00955 0.0 yobO M Pectate lyase superfamily protein
LNIPHOMF_00956 9.5e-280 iaaM 1.4.3.4 E COG1231 Monoamine oxidase
LNIPHOMF_00957 1.1e-08 ydjC S Abhydrolase domain containing 18
LNIPHOMF_00958 0.0 K NB-ARC domain
LNIPHOMF_00959 3.8e-201 gutB 1.1.1.14 E Dehydrogenase
LNIPHOMF_00960 7.1e-256 gutA G MFS/sugar transport protein
LNIPHOMF_00961 1.5e-175 ydjE 2.7.1.4 G pfkB family carbohydrate kinase
LNIPHOMF_00962 5.1e-114 pspA KT Phage shock protein A
LNIPHOMF_00963 3.4e-178 ydjG 3.6.4.12 L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LNIPHOMF_00964 1.6e-137 ydjH S COG1512 Beta-propeller domains of methanol dehydrogenase type
LNIPHOMF_00965 1.4e-149 ydjI S virion core protein (lumpy skin disease virus)
LNIPHOMF_00966 4.7e-196 S Ion transport 2 domain protein
LNIPHOMF_00967 2.7e-258 iolT EGP Major facilitator Superfamily
LNIPHOMF_00968 5.2e-195 bdhA 1.1.1.303, 1.1.1.4 E Dehydrogenase
LNIPHOMF_00969 4.5e-64 ydjM M Lytic transglycolase
LNIPHOMF_00970 4.4e-157 ydjN U Involved in the tonB-independent uptake of proteins
LNIPHOMF_00972 1.4e-34 ydjO S Cold-inducible protein YdjO
LNIPHOMF_00973 9.5e-160 ydjP I Alpha/beta hydrolase family
LNIPHOMF_00974 2.4e-181 yeaA S Protein of unknown function (DUF4003)
LNIPHOMF_00975 0.0 cotA 1.10.3.4, 1.16.3.3 Q multicopper oxidases
LNIPHOMF_00976 2.6e-253 gabP E COG1113 Gamma-aminobutyrate permease and related permeases
LNIPHOMF_00977 7.6e-155 yeaB P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LNIPHOMF_00978 1.6e-177 yeaC S COG0714 MoxR-like ATPases
LNIPHOMF_00979 9.5e-225 yeaD S conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
LNIPHOMF_00980 0.0 yebA E COG1305 Transglutaminase-like enzymes
LNIPHOMF_00981 3.7e-306 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
LNIPHOMF_00982 6e-212 pbuG S permease
LNIPHOMF_00983 1.1e-118 yebC M Membrane
LNIPHOMF_00985 4e-93 yebE S UPF0316 protein
LNIPHOMF_00986 8e-28 yebG S NETI protein
LNIPHOMF_00987 2.5e-83 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LNIPHOMF_00988 7e-217 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LNIPHOMF_00989 9.6e-247 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LNIPHOMF_00990 1.2e-132 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
LNIPHOMF_00991 2.9e-38 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LNIPHOMF_00992 5.1e-130 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LNIPHOMF_00993 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LNIPHOMF_00994 1.2e-271 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LNIPHOMF_00995 7.6e-178 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
LNIPHOMF_00996 1.3e-105 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LNIPHOMF_00997 1.2e-288 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
LNIPHOMF_00998 1.7e-235 purD 6.3.4.13 F Belongs to the GARS family
LNIPHOMF_00999 3.5e-73 K helix_turn_helix ASNC type
LNIPHOMF_01000 2.3e-232 yjeH E Amino acid permease
LNIPHOMF_01001 2.7e-27 S Protein of unknown function (DUF2892)
LNIPHOMF_01002 0.0 yerA 3.5.4.2 F adenine deaminase
LNIPHOMF_01003 3e-192 yerB S Protein of unknown function (DUF3048) C-terminal domain
LNIPHOMF_01004 4.8e-51 yerC S protein conserved in bacteria
LNIPHOMF_01005 3.2e-305 yerD 1.4.7.1 E Belongs to the glutamate synthase family
LNIPHOMF_01007 2.2e-125 pcrB I 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
LNIPHOMF_01008 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
LNIPHOMF_01009 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LNIPHOMF_01010 4.1e-220 camS S COG4851 Protein involved in sex pheromone biosynthesis
LNIPHOMF_01011 1.1e-197 yerI S homoserine kinase type II (protein kinase fold)
LNIPHOMF_01012 1.6e-123 sapB S MgtC SapB transporter
LNIPHOMF_01013 2e-264 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LNIPHOMF_01014 2.1e-45 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LNIPHOMF_01015 1.2e-274 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
LNIPHOMF_01016 3.1e-270 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LNIPHOMF_01017 4e-156 yerO K Transcriptional regulator
LNIPHOMF_01018 0.0 swrC V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LNIPHOMF_01019 3e-170 yegS 2.7.1.107 I COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
LNIPHOMF_01020 1.2e-255 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LNIPHOMF_01021 3.2e-98 L Recombinase
LNIPHOMF_01022 3.2e-53 L Resolvase, N terminal domain
LNIPHOMF_01023 0.0 yeeA V Type II restriction enzyme, methylase subunits
LNIPHOMF_01024 0.0 yeeB L DEAD-like helicases superfamily
LNIPHOMF_01025 1.8e-212 pstS P T5orf172
LNIPHOMF_01027 6.2e-31 S Colicin immunity protein / pyocin immunity protein
LNIPHOMF_01028 5.5e-83 S Protein of unknown function, DUF600
LNIPHOMF_01029 0.0 L nucleic acid phosphodiester bond hydrolysis
LNIPHOMF_01030 1.8e-192 3.4.24.40 CO amine dehydrogenase activity
LNIPHOMF_01031 5.5e-214 S Tetratricopeptide repeat
LNIPHOMF_01033 9.4e-127 yeeN K transcriptional regulatory protein
LNIPHOMF_01035 1.2e-103 dhaR3 K Transcriptional regulator
LNIPHOMF_01036 9.7e-82 yesE S SnoaL-like domain
LNIPHOMF_01037 2.2e-159 yesF GM NAD(P)H-binding
LNIPHOMF_01038 5.3e-45 cotJA S Spore coat associated protein JA (CotJA)
LNIPHOMF_01039 1.5e-45 cotJB S CotJB protein
LNIPHOMF_01040 5.2e-104 cotJC P Spore Coat
LNIPHOMF_01041 4.2e-103 yesJ K Acetyltransferase (GNAT) family
LNIPHOMF_01043 4.4e-104 yesL S Protein of unknown function, DUF624
LNIPHOMF_01044 0.0 yesM 2.7.13.3 T Histidine kinase
LNIPHOMF_01045 2.9e-204 yesN K helix_turn_helix, arabinose operon control protein
LNIPHOMF_01046 5e-248 yesO G Bacterial extracellular solute-binding protein
LNIPHOMF_01047 2.8e-171 yesP G Binding-protein-dependent transport system inner membrane component
LNIPHOMF_01048 1.3e-165 yesQ P Binding-protein-dependent transport system inner membrane component
LNIPHOMF_01049 1.6e-199 3.2.1.172 GH105 S Glycosyl Hydrolase Family 88
LNIPHOMF_01050 0.0 yesS K Transcriptional regulator
LNIPHOMF_01051 3.8e-133 E GDSL-like Lipase/Acylhydrolase
LNIPHOMF_01052 8.9e-132 yesU S Domain of unknown function (DUF1961)
LNIPHOMF_01053 1e-113 yesV S Protein of unknown function, DUF624
LNIPHOMF_01054 0.0 yesX 4.2.2.23, 4.2.2.24 PL11 E cell wall organization
LNIPHOMF_01055 0.0 yesX 4.2.2.23, 4.2.2.24 PL11 E cell wall organization
LNIPHOMF_01056 3e-124 yesY E GDSL-like Lipase/Acylhydrolase
LNIPHOMF_01057 0.0 yesZ 3.2.1.23 G beta-galactosidase activity
LNIPHOMF_01058 0.0 yetA
LNIPHOMF_01059 9.6e-291 lplA G Bacterial extracellular solute-binding protein
LNIPHOMF_01060 1.3e-176 lplB G COG4209 ABC-type polysaccharide transport system, permease component
LNIPHOMF_01061 1.7e-162 lplC G Binding-protein-dependent transport system inner membrane component
LNIPHOMF_01062 3.3e-258 lplD 3.2.1.122, 3.2.1.22, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase
LNIPHOMF_01063 6.1e-123 yetF S membrane
LNIPHOMF_01064 4.4e-55 isdI 1.14.99.48, 1.14.99.57 S Antibiotic biosynthesis monooxygenase
LNIPHOMF_01065 2e-64 yetH E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LNIPHOMF_01066 2.2e-34
LNIPHOMF_01067 2.2e-89 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
LNIPHOMF_01068 4.4e-43 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
LNIPHOMF_01069 8.9e-20 yezD S Uncharacterized small protein (DUF2292)
LNIPHOMF_01070 5.3e-105 yetJ S Belongs to the BI1 family
LNIPHOMF_01071 5.4e-159 yetK EG EamA-like transporter family
LNIPHOMF_01072 6.4e-90 yetL K helix_turn_helix multiple antibiotic resistance protein
LNIPHOMF_01073 7.8e-213 yetM CH FAD binding domain
LNIPHOMF_01074 3.6e-199 yetN S Protein of unknown function (DUF3900)
LNIPHOMF_01075 0.0 cypD 1.14.14.1, 1.6.2.4 C Belongs to the cytochrome P450 family
LNIPHOMF_01076 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
LNIPHOMF_01077 2.1e-148 rfbF 2.7.7.33 JM Nucleotidyl transferase
LNIPHOMF_01078 1.9e-172 yfnG 4.2.1.45 M dehydratase
LNIPHOMF_01079 3.8e-181 yfnF M Nucleotide-diphospho-sugar transferase
LNIPHOMF_01080 1.4e-225 yfnE 2.4.1.338 GT2 S Glycosyltransferase like family 2
LNIPHOMF_01081 3.5e-190 yfnD M Nucleotide-diphospho-sugar transferase
LNIPHOMF_01082 2e-206 fsr P COG0477 Permeases of the major facilitator superfamily
LNIPHOMF_01083 7.8e-134 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
LNIPHOMF_01084 1.3e-241 yfnA E amino acid
LNIPHOMF_01085 2.8e-279 yfmT 1.2.1.3, 1.2.1.67 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
LNIPHOMF_01086 1.1e-113 yfmS NT chemotaxis protein
LNIPHOMF_01087 0.0 yfmR S COG0488 ATPase components of ABC transporters with duplicated ATPase domains
LNIPHOMF_01088 3e-75 yfmQ S Uncharacterised protein from bacillus cereus group
LNIPHOMF_01089 2.8e-70 yfmP K transcriptional
LNIPHOMF_01090 1.5e-209 yfmO EGP Major facilitator Superfamily
LNIPHOMF_01091 1.9e-297 yfmM S COG0488 ATPase components of ABC transporters with duplicated ATPase domains
LNIPHOMF_01092 6.3e-202 yfmL 3.6.4.13 L COG0513 Superfamily II DNA and RNA helicases
LNIPHOMF_01093 7.5e-82 yfmK 2.3.1.128 K acetyltransferase
LNIPHOMF_01094 8.5e-190 yfmJ S N-terminal domain of oxidoreductase
LNIPHOMF_01101 3.8e-227 gltP C Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
LNIPHOMF_01102 1.7e-72 3.4.13.21 S ASCH
LNIPHOMF_01103 1.6e-199 yhfE 3.2.1.4 GH5,GH9 G peptidase M42
LNIPHOMF_01104 9.8e-138 yhfC S Putative membrane peptidase family (DUF2324)
LNIPHOMF_01105 3e-184 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LNIPHOMF_01106 1e-238 yhgE S YhgE Pip N-terminal domain protein
LNIPHOMF_01107 1.4e-101 yhgD K Transcriptional regulator
LNIPHOMF_01108 1.7e-268 hemG 1.14.19.9, 1.3.3.15, 1.3.3.4 H Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
LNIPHOMF_01109 7.3e-180 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
LNIPHOMF_01110 1.7e-204 hemE 4.1.1.37 H Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
LNIPHOMF_01111 0.0 pbpF 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
LNIPHOMF_01112 1.3e-90 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
LNIPHOMF_01113 7.5e-17 1.15.1.2 C Rubrerythrin
LNIPHOMF_01114 4.2e-248 yhfA C membrane
LNIPHOMF_01115 2.3e-231 yhaA 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
LNIPHOMF_01116 4.8e-115 ecsC S EcsC protein family
LNIPHOMF_01117 1.8e-215 ecsB U ABC transporter
LNIPHOMF_01118 4.6e-137 ecsA V transporter (ATP-binding protein)
LNIPHOMF_01119 4.7e-81 hit FG COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
LNIPHOMF_01120 9.9e-205 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
LNIPHOMF_01121 3.6e-80 trpP S Tryptophan transporter TrpP
LNIPHOMF_01122 7e-39 yhaH S YtxH-like protein
LNIPHOMF_01123 1e-113 hpr K Negative regulator of protease production and sporulation
LNIPHOMF_01124 1.3e-54 yhaI S Protein of unknown function (DUF1878)
LNIPHOMF_01125 8.7e-90 yhaK S Putative zincin peptidase
LNIPHOMF_01126 1.9e-121 prsA 5.2.1.8 M plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
LNIPHOMF_01127 1.6e-21 yhaL S Sporulation protein YhaL
LNIPHOMF_01128 1.5e-177 yhaM L Shows a 3'-5' exoribonuclease activity
LNIPHOMF_01129 0.0 yhaN L AAA domain
LNIPHOMF_01130 3.6e-227 yhaO L DNA repair exonuclease
LNIPHOMF_01131 4.2e-215 yhaP CP COG1668 ABC-type Na efflux pump, permease component
LNIPHOMF_01132 1.8e-167 yhaQ S ABC transporter, ATP-binding protein
LNIPHOMF_01133 1.1e-26 S YhzD-like protein
LNIPHOMF_01134 1.9e-133 yhaR 5.3.3.18 I enoyl-CoA hydratase
LNIPHOMF_01136 7.8e-88 yhaT P regulatory, ligand-binding protein related to C-terminal domains of K channels
LNIPHOMF_01137 1.7e-208 yhaU P COG0475 Kef-type K transport systems, membrane components
LNIPHOMF_01138 7.1e-294 hemZ H coproporphyrinogen III oxidase
LNIPHOMF_01139 4.3e-142 yhaX S haloacid dehalogenase-like hydrolase
LNIPHOMF_01140 3.1e-206 yhaZ L DNA alkylation repair enzyme
LNIPHOMF_01141 9.5e-48 yheA S Belongs to the UPF0342 family
LNIPHOMF_01142 6.7e-204 yheB S Belongs to the UPF0754 family
LNIPHOMF_01143 4.3e-216 yheC HJ YheC/D like ATP-grasp
LNIPHOMF_01144 1.6e-268 gshB 6.3.2.2, 6.3.2.3 HJ YheC/D like ATP-grasp
LNIPHOMF_01145 1.3e-36 yheE S Family of unknown function (DUF5342)
LNIPHOMF_01146 6.3e-28 sspB S spore protein
LNIPHOMF_01147 3.7e-111 yheG GM NAD(P)H-binding
LNIPHOMF_01148 0.0 yheH V COG1132 ABC-type multidrug transport system, ATPase and permease components
LNIPHOMF_01149 0.0 yheI V COG1132 ABC-type multidrug transport system, ATPase and permease components
LNIPHOMF_01150 3.4e-84 nhaX T Belongs to the universal stress protein A family
LNIPHOMF_01151 2.2e-233 nhaC C Na H antiporter
LNIPHOMF_01152 1.1e-153 dat 2.6.1.21 E Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in the first half-reaction
LNIPHOMF_01153 1.7e-151 yheN G deacetylase
LNIPHOMF_01154 1.2e-140 cobB K NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form
LNIPHOMF_01155 6.6e-204 yhdY M Mechanosensitive ion channel
LNIPHOMF_01157 3.3e-135 yhdW 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
LNIPHOMF_01158 5.1e-66 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LNIPHOMF_01159 2.8e-47 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LNIPHOMF_01160 1.1e-240 corC1 P COG1253 Hemolysins and related proteins containing CBS domains
LNIPHOMF_01161 1.4e-223 yhdR 2.6.1.1 E Aminotransferase
LNIPHOMF_01162 4.1e-74 cueR K transcriptional
LNIPHOMF_01163 3.1e-240 corC1 S COG1253 Hemolysins and related proteins containing CBS domains
LNIPHOMF_01164 3e-110 plsC 2.3.1.51 I Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
LNIPHOMF_01165 1.5e-191 yhdN C Aldo keto reductase
LNIPHOMF_01166 5.5e-86 sigM K Belongs to the sigma-70 factor family. ECF subfamily
LNIPHOMF_01167 6.6e-201 yhdL S Sigma factor regulator N-terminal
LNIPHOMF_01168 8.1e-45 yhdK S Sigma-M inhibitor protein
LNIPHOMF_01169 6.9e-77 BH1582 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LNIPHOMF_01170 3.7e-276 ydeL K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
LNIPHOMF_01171 1.5e-242 yhdH S Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
LNIPHOMF_01172 3.4e-250 yhdG E amino acid
LNIPHOMF_01173 4.9e-162 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LNIPHOMF_01174 1.4e-206 citA 2.3.3.1 C Belongs to the citrate synthase family
LNIPHOMF_01175 3.8e-162 citR K Transcriptional regulator
LNIPHOMF_01176 2.5e-141 lytE 3.5.1.28 CBM50 M COG1388 FOG LysM repeat
LNIPHOMF_01177 5.9e-18
LNIPHOMF_01178 1.4e-53 tnrA K transcriptional
LNIPHOMF_01179 2.2e-222 mgtE P Acts as a magnesium transporter
LNIPHOMF_01182 4.4e-86 ykoJ S Peptidase propeptide and YPEB domain
LNIPHOMF_01183 1.1e-113 ykoI S Peptidase propeptide and YPEB domain
LNIPHOMF_01184 9.4e-245 ykoH 2.7.13.3 T Histidine kinase
LNIPHOMF_01185 2.4e-124 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LNIPHOMF_01186 7.9e-111 ykoF S YKOF-related Family
LNIPHOMF_01187 6.9e-99 ykoE S ABC-type cobalt transport system, permease component
LNIPHOMF_01188 4.6e-311 P ABC transporter, ATP-binding protein
LNIPHOMF_01189 1.8e-136 ykoC P Cobalt transport protein
LNIPHOMF_01190 6.3e-151 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
LNIPHOMF_01191 1.7e-176 isp O Belongs to the peptidase S8 family
LNIPHOMF_01192 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LNIPHOMF_01193 2.8e-87 guaD 3.5.4.12, 3.5.4.3, 3.5.4.33 FJ COG0590 Cytosine adenosine deaminases
LNIPHOMF_01195 8.4e-72 ohrB O Organic hydroperoxide resistance protein
LNIPHOMF_01196 3.9e-75 ohrR K COG1846 Transcriptional regulators
LNIPHOMF_01197 1.3e-70 ohrA O Organic hydroperoxide resistance protein
LNIPHOMF_01198 2.5e-228 proA 1.2.1.41, 1.2.1.81 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LNIPHOMF_01199 1e-201 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LNIPHOMF_01200 3.9e-170 purU 2.7.7.72, 3.5.1.10 F Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4)
LNIPHOMF_01201 1.1e-50 ykkD P Multidrug resistance protein
LNIPHOMF_01202 3.5e-55 ykkC P Multidrug resistance protein
LNIPHOMF_01203 1e-98 ykkB 2.3.1.128 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
LNIPHOMF_01204 1e-98 ykkA S Protein of unknown function (DUF664)
LNIPHOMF_01205 5.4e-130 ykjA S Protein of unknown function (DUF421)
LNIPHOMF_01206 1e-07
LNIPHOMF_01207 1e-226 hmp 1.14.12.17 C Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
LNIPHOMF_01208 1.5e-92 ykhA 3.1.2.20 I Acyl-CoA hydrolase
LNIPHOMF_01209 5.3e-161 ykgA E Amidinotransferase
LNIPHOMF_01210 7.4e-205 pgl 3.1.1.31 G 6-phosphogluconolactonase
LNIPHOMF_01211 7.7e-188 ykfD E Belongs to the ABC transporter superfamily
LNIPHOMF_01212 5.3e-172 ykfC 3.4.14.13 M COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
LNIPHOMF_01213 3.2e-203 ykfB 5.1.1.20 M Belongs to the mandelate racemase muconate lactonizing enzyme family
LNIPHOMF_01214 8.1e-179 ykfA 3.4.17.13 V proteins, homologs of microcin C7 resistance protein MccF
LNIPHOMF_01216 0.0 dppE E ABC transporter substrate-binding protein
LNIPHOMF_01217 3.4e-191 dppD P Belongs to the ABC transporter superfamily
LNIPHOMF_01218 3.9e-176 dppC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
LNIPHOMF_01219 4.5e-155 dppB P COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
LNIPHOMF_01220 7.9e-154 dppA E D-aminopeptidase
LNIPHOMF_01221 1e-137 proG 1.5.1.2 E Pyrroline-5-carboxylate reductase
LNIPHOMF_01222 8.5e-214 htrA 3.4.21.107 O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LNIPHOMF_01224 1.3e-179 ykcC GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
LNIPHOMF_01225 0.0 ykcB M COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LNIPHOMF_01227 7.2e-183 mhqA E COG0346 Lactoylglutathione lyase and related lyases
LNIPHOMF_01228 9.4e-242 steT E amino acid
LNIPHOMF_01229 6.9e-110 ykaA P COG1392 Phosphate transport regulator (distant homolog of PhoU)
LNIPHOMF_01230 5.8e-175 pit P phosphate transporter
LNIPHOMF_01231 1.8e-136 spoIISA S Toxin SpoIISA, type II toxin-antitoxin system
LNIPHOMF_01232 6.7e-23 spoIISB S Stage II sporulation protein SB
LNIPHOMF_01233 1.2e-163 xlyA 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
LNIPHOMF_01234 9.3e-40 xhlB S SPP1 phage holin
LNIPHOMF_01235 2.8e-39 xhlA S Haemolysin XhlA
LNIPHOMF_01236 1.2e-154 xepA
LNIPHOMF_01237 1.7e-23 xkdX
LNIPHOMF_01238 2.6e-55 xkdW S XkdW protein
LNIPHOMF_01239 0.0
LNIPHOMF_01240 6.7e-41
LNIPHOMF_01241 4e-104 xkdU S Uncharacterised protein conserved in bacteria (DUF2313)
LNIPHOMF_01242 6e-191 xkdT S Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
LNIPHOMF_01243 9.6e-71 xkdS S Protein of unknown function (DUF2634)
LNIPHOMF_01244 2.1e-39 xkdR S Protein of unknown function (DUF2577)
LNIPHOMF_01245 4.8e-182 yqbQ 3.2.1.96 G NLP P60 protein
LNIPHOMF_01246 3.7e-122 xkdP S Lysin motif
LNIPHOMF_01247 0.0 xkdO L Transglycosylase SLT domain
LNIPHOMF_01248 1.9e-77 S Phage XkdN-like tail assembly chaperone protein, TAC
LNIPHOMF_01249 6.1e-76 xkdM S Phage tail tube protein
LNIPHOMF_01250 2.5e-256 xkdK S Phage tail sheath C-terminal domain
LNIPHOMF_01251 1.9e-77 xkdJ
LNIPHOMF_01252 4.4e-88 xkdI S Bacteriophage HK97-gp10, putative tail-component
LNIPHOMF_01253 8.7e-65 yqbH S Domain of unknown function (DUF3599)
LNIPHOMF_01254 5.5e-65 yqbG S Protein of unknown function (DUF3199)
LNIPHOMF_01255 5.8e-169 xkdG S Phage capsid family
LNIPHOMF_01256 1.2e-133 yqbD 2.1.1.72 L Putative phage serine protease XkdF
LNIPHOMF_01257 5.4e-286 yqbA S portal protein
LNIPHOMF_01258 9.6e-255 xtmB S phage terminase, large subunit
LNIPHOMF_01259 4.8e-140 xtmA L phage terminase small subunit
LNIPHOMF_01260 4.4e-86 xpf K COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
LNIPHOMF_01261 4.6e-10 yqaO S Phage-like element PBSX protein XtrA
LNIPHOMF_01264 6.4e-119 xkdC L Bacterial dnaA protein
LNIPHOMF_01265 5.9e-157 xkdB K sequence-specific DNA binding
LNIPHOMF_01267 2.8e-137 yrvM H COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
LNIPHOMF_01268 2e-236 rarA L COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase
LNIPHOMF_01269 1.2e-70 cymR K Transcriptional regulator
LNIPHOMF_01270 4.7e-213 iscS 2.8.1.7 E Cysteine desulfurase
LNIPHOMF_01271 2.3e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
LNIPHOMF_01272 1.4e-15 S COG0457 FOG TPR repeat
LNIPHOMF_01273 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
LNIPHOMF_01274 1.8e-83 yrrD S protein conserved in bacteria
LNIPHOMF_01275 9.8e-31 yrzR
LNIPHOMF_01276 8e-08 S Protein of unknown function (DUF3918)
LNIPHOMF_01277 7.6e-107 glnP P ABC transporter
LNIPHOMF_01278 3.6e-109 gluC P ABC transporter
LNIPHOMF_01279 5.1e-145 glnH ET Belongs to the bacterial solute-binding protein 3 family
LNIPHOMF_01280 1.3e-131 glnQ 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
LNIPHOMF_01281 2.7e-170 yrrI S AI-2E family transporter
LNIPHOMF_01282 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LNIPHOMF_01283 1.7e-41 yrzL S Belongs to the UPF0297 family
LNIPHOMF_01284 2.1e-70 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LNIPHOMF_01285 1.2e-45 yrzB S Belongs to the UPF0473 family
LNIPHOMF_01286 1.6e-183 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LNIPHOMF_01287 5.9e-120 yrrM 2.1.1.104 S O-methyltransferase
LNIPHOMF_01288 7.8e-174 yegQ O Peptidase U32
LNIPHOMF_01289 2.7e-246 yegQ O COG0826 Collagenase and related proteases
LNIPHOMF_01290 4.7e-114 udk 2.7.1.48 F Cytidine monophosphokinase
LNIPHOMF_01291 2.4e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LNIPHOMF_01292 0.0 pbpI 3.4.16.4 M Penicillin-binding Protein
LNIPHOMF_01293 4.2e-63 yrrS S Protein of unknown function (DUF1510)
LNIPHOMF_01294 7e-27 yrzA S Protein of unknown function (DUF2536)
LNIPHOMF_01295 1.2e-120 yrrT 4.4.1.21 Q Could be a S-adenosyl-L-methionine-dependent methyltransferase
LNIPHOMF_01296 4.2e-124 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LNIPHOMF_01297 1.2e-171 mccA 2.5.1.134, 2.5.1.47 E Cysteine synthase
LNIPHOMF_01298 2.6e-211 mccB 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
LNIPHOMF_01299 4.6e-35 yrhC S YrhC-like protein
LNIPHOMF_01300 1.4e-78 yrhD S Protein of unknown function (DUF1641)
LNIPHOMF_01301 0.0 fdhA 1.17.1.10, 1.17.1.9 C formate dehydrogenase (NAD+) activity
LNIPHOMF_01302 7.8e-61 yrhF S Uncharacterized conserved protein (DUF2294)
LNIPHOMF_01303 1.8e-142 focA P Formate nitrite
LNIPHOMF_01306 4.5e-97 yrhH Q methyltransferase
LNIPHOMF_01307 4.8e-105 Z012_03230 K Tetracycline repressor, C-terminal all-alpha domain
LNIPHOMF_01308 0.0 cypD 1.14.14.1, 1.6.2.4 C Belongs to the cytochrome P450 family
LNIPHOMF_01309 1.5e-46 yrhK S YrhK-like protein
LNIPHOMF_01310 0.0 yrhL I Acyltransferase family
LNIPHOMF_01311 1.7e-151 rsiV S Protein of unknown function (DUF3298)
LNIPHOMF_01312 4.3e-86 sigV K Belongs to the sigma-70 factor family. ECF subfamily
LNIPHOMF_01313 1.1e-150 yrhO K Archaeal transcriptional regulator TrmB
LNIPHOMF_01314 3.6e-106 yrhP E LysE type translocator
LNIPHOMF_01315 1.6e-255 cycA E COG1113 Gamma-aminobutyrate permease and related permeases
LNIPHOMF_01316 0.0 levR K PTS system fructose IIA component
LNIPHOMF_01317 3.9e-75 levD 2.7.1.202 G PTS system fructose IIA component
LNIPHOMF_01318 6.3e-82 levE 2.7.1.202 G PTS system mannose fructose sorbose family
LNIPHOMF_01319 4.9e-116 manY G COG3715 Phosphotransferase system, mannose fructose N-acetylgalactosamine-specific component IIC
LNIPHOMF_01320 1.5e-152 manZ G COG3716 Phosphotransferase system, mannose fructose N-acetylgalactosamine-specific component IID
LNIPHOMF_01321 0.0 sacC 3.2.1.26, 3.2.1.65, 3.2.1.80 GH32 G Belongs to the glycosyl hydrolase 32 family
LNIPHOMF_01322 5e-90 yhbO 1.11.1.6, 3.5.1.124 S protease
LNIPHOMF_01323 1.9e-200 adhA 1.1.1.1 C alcohol dehydrogenase
LNIPHOMF_01324 3.2e-29 yphJ 4.1.1.44 S peroxiredoxin activity
LNIPHOMF_01325 4.3e-47 yraB K helix_turn_helix, mercury resistance
LNIPHOMF_01326 1.1e-49 yraD M Spore coat protein
LNIPHOMF_01327 2.6e-26 yraE
LNIPHOMF_01328 2.9e-223 adhB 1.1.1.1, 1.1.1.14, 1.1.1.284, 1.2.1.46 E COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
LNIPHOMF_01329 6.4e-63 yraF M Spore coat protein
LNIPHOMF_01330 5.3e-37 yraG
LNIPHOMF_01331 1.3e-66 E Glyoxalase-like domain
LNIPHOMF_01332 2.4e-61 T sh3 domain protein
LNIPHOMF_01333 1.7e-60 T sh3 domain protein
LNIPHOMF_01334 3.2e-155 S Alpha beta hydrolase
LNIPHOMF_01335 7.6e-42 yraL S COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
LNIPHOMF_01336 2.7e-157 csn 3.2.1.132 M Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan
LNIPHOMF_01338 2.4e-206 yraM S PrpF protein
LNIPHOMF_01339 1.2e-163 yraN K Transcriptional regulator
LNIPHOMF_01340 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LNIPHOMF_01341 3.3e-71 ywhA K Transcriptional regulator
LNIPHOMF_01342 2.7e-25 dmpI 5.3.2.6 G 4-oxalocrotonate tautomerase
LNIPHOMF_01343 5.1e-119 ywhC S Peptidase family M50
LNIPHOMF_01344 5.2e-95 ywhD S YwhD family
LNIPHOMF_01345 0.0 pbpG 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
LNIPHOMF_01346 1.4e-158 speE 2.5.1.16 E Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
LNIPHOMF_01347 9.2e-169 speB 3.5.3.11 E Belongs to the arginase family
LNIPHOMF_01348 1e-84 ywhH S Aminoacyl-tRNA editing domain
LNIPHOMF_01350 2.3e-79 S aspartate phosphatase
LNIPHOMF_01351 2.5e-205 ywhK CO amine dehydrogenase activity
LNIPHOMF_01352 2.9e-249 ywhL CO amine dehydrogenase activity
LNIPHOMF_01354 1.2e-249 L Peptidase, M16
LNIPHOMF_01355 2.7e-219 2.7.1.26, 2.7.7.2 L Peptidase, M16
LNIPHOMF_01356 3.1e-237 mgtA 3.6.3.2 P ATPase, P-type transporting, HAD superfamily, subfamily IC
LNIPHOMF_01357 3.3e-132 cbiO V ABC transporter
LNIPHOMF_01359 2.6e-271 C Fe-S oxidoreductases
LNIPHOMF_01360 1e-07 S Bacteriocin subtilosin A
LNIPHOMF_01361 4.7e-73 ywiB S protein conserved in bacteria
LNIPHOMF_01362 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
LNIPHOMF_01363 9.8e-214 narK P COG2223 Nitrate nitrite transporter
LNIPHOMF_01364 5.3e-130 fnr K helix_turn_helix, cAMP Regulatory protein
LNIPHOMF_01365 4.3e-140 ywiC S YwiC-like protein
LNIPHOMF_01366 7e-86 arfM T cyclic nucleotide binding
LNIPHOMF_01367 0.0 narG 1.7.5.1 C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
LNIPHOMF_01368 1e-297 narH 1.7.5.1 C Nitrate reductase, beta
LNIPHOMF_01369 2.4e-98 narJ 1.7.5.1 C nitrate reductase
LNIPHOMF_01370 1.8e-124 narI 1.7.5.1 C nitrate reductase, gamma
LNIPHOMF_01371 6.4e-287 ywiE I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LNIPHOMF_01372 0.0 ywjA V ABC transporter
LNIPHOMF_01373 4.8e-96 ywjB H RibD C-terminal domain
LNIPHOMF_01374 2.7e-42 ywjC
LNIPHOMF_01375 6.6e-184 uvsE L Component in a DNA repair pathway. Removal of UV-light damaged nucleotides. Recognizes pyrimidine dimers and cleave a phosphodiester bond immediately 5' to the lesion
LNIPHOMF_01376 2.3e-223 clsB I Belongs to the phospholipase D family. Cardiolipin synthase subfamily
LNIPHOMF_01377 0.0 fadF C COG0247 Fe-S oxidoreductase
LNIPHOMF_01378 2.6e-211 acdA 1.3.8.1, 1.3.8.7 I acyl-CoA dehydrogenase
LNIPHOMF_01379 1.5e-49 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
LNIPHOMF_01380 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
LNIPHOMF_01381 2.4e-92 ywjG S Domain of unknown function (DUF2529)
LNIPHOMF_01382 1.1e-62 spo0F T COG0784 FOG CheY-like receiver
LNIPHOMF_01383 7.2e-158 fbaA 4.1.2.13, 4.1.2.29 G Aldolase
LNIPHOMF_01384 1.5e-112 tal 2.2.1.2 G Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LNIPHOMF_01385 8.6e-240 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LNIPHOMF_01386 1.9e-175 glpX 3.1.3.11, 3.1.3.37 G fructose-1,6-bisphosphatase
LNIPHOMF_01387 2.8e-238 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
LNIPHOMF_01388 1.1e-32 rpmE J Binds the 23S rRNA
LNIPHOMF_01389 2.4e-104 tdk 2.7.1.21 F thymidine kinase
LNIPHOMF_01390 0.0 sfcA 1.1.1.38 C malic enzyme
LNIPHOMF_01391 8.6e-160 ywkB S Membrane transport protein
LNIPHOMF_01392 1.7e-91 racA K Required for the formation of axial filaments and for anchoring the origin regions at the cell poles in sporulating cells, thus ensuring proper chromosome segregation in the prespore. Binds in a dispersed manner throughout the chromosome but preferentially to sites clustered in the origin portion of the chromosome, causing condensation of the chromosome and its remodeling into an elongated, anchored structure
LNIPHOMF_01393 8.2e-69 yaeR E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LNIPHOMF_01394 9.5e-192 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LNIPHOMF_01395 2.3e-159 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
LNIPHOMF_01397 3.4e-56 ywlA S Uncharacterised protein family (UPF0715)
LNIPHOMF_01398 6.1e-112 spoIIR S stage II sporulation protein R
LNIPHOMF_01399 1.2e-76 ywlB 1.20.4.1, 2.3.1.1 E Belongs to the acetyltransferase family. ArgA subfamily
LNIPHOMF_01400 1.2e-196 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
LNIPHOMF_01401 1.7e-91 mntP P Probably functions as a manganese efflux pump
LNIPHOMF_01402 1.7e-78 ywlE 3.1.3.48, 3.9.1.2, 5.3.1.6 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LNIPHOMF_01403 1.7e-81 rpiB 5.3.1.6 G Ribose 5-phosphate isomerase
LNIPHOMF_01404 7.2e-95 ywlG S Belongs to the UPF0340 family
LNIPHOMF_01405 2.1e-238 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
LNIPHOMF_01406 4.7e-114 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LNIPHOMF_01407 2.5e-62 atpI S ATP synthase
LNIPHOMF_01408 5.7e-277 prpD 4.2.1.79 S 2-methylcitrate dehydratase
LNIPHOMF_01409 8.1e-210 prpC 2.3.3.1, 2.3.3.5 C Belongs to the citrate synthase family
LNIPHOMF_01410 1.8e-212 mmgC I acyl-CoA dehydrogenase
LNIPHOMF_01411 4.7e-157 hbdA 1.1.1.157 I Dehydrogenase
LNIPHOMF_01412 1.2e-219 mmgA 2.3.1.9 I Belongs to the thiolase family
LNIPHOMF_01413 1.8e-133 yqiK 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
LNIPHOMF_01414 5.4e-107 amiC 3.5.1.28 M Cell wall hydrolase autolysin
LNIPHOMF_01415 5.9e-27
LNIPHOMF_01416 1.3e-215 yqiG C COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family
LNIPHOMF_01418 3.2e-144 KT May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process
LNIPHOMF_01419 1.2e-238 rseP 3.4.21.116 M Stage IV sporulation protein B
LNIPHOMF_01420 0.0 recN L May be involved in recombinational repair of damaged DNA
LNIPHOMF_01421 1.7e-78 argR K Regulates arginine biosynthesis genes
LNIPHOMF_01422 6.6e-156 rrmJ 2.1.1.226, 2.1.1.227 J rRNA methylase
LNIPHOMF_01423 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LNIPHOMF_01424 7.7e-163 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
LNIPHOMF_01425 5.8e-39 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LNIPHOMF_01426 2.2e-246 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LNIPHOMF_01427 1e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LNIPHOMF_01428 1.9e-65 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LNIPHOMF_01429 2.1e-67 yqhY S protein conserved in bacteria
LNIPHOMF_01430 1.5e-255 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
LNIPHOMF_01431 1.5e-64 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
LNIPHOMF_01432 9.9e-91 spoIIIAH S SpoIIIAH-like protein
LNIPHOMF_01433 6.9e-103 spoIIIAG S stage III sporulation protein AG
LNIPHOMF_01434 3.1e-102 spoIIIAF S Stage III sporulation protein AF (Spore_III_AF)
LNIPHOMF_01435 1.3e-197 spoIIIAE S stage III sporulation protein AE
LNIPHOMF_01436 2.3e-58 spoIIIAD S Stage III sporulation protein AD
LNIPHOMF_01437 7.6e-29 spoIIIAC S stage III sporulation protein AC
LNIPHOMF_01438 2.9e-85 spoIIIAB S Stage III sporulation protein
LNIPHOMF_01439 1.2e-171 spoIIIAA S stage III sporulation protein AA
LNIPHOMF_01440 7.9e-37 yqhV S Protein of unknown function (DUF2619)
LNIPHOMF_01441 5.4e-98 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LNIPHOMF_01442 8.9e-174 yqhT 3.4.11.9, 3.4.13.9 E COG0006 Xaa-Pro aminopeptidase
LNIPHOMF_01443 1.5e-77 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
LNIPHOMF_01444 2.3e-93 yqhR S Conserved membrane protein YqhR
LNIPHOMF_01445 9.4e-175 yqhQ S Protein of unknown function (DUF1385)
LNIPHOMF_01446 2.2e-61 yqhP
LNIPHOMF_01447 8.1e-165 yqhO S esterase of the alpha-beta hydrolase superfamily
LNIPHOMF_01448 9.4e-74 mntR K Involved in manganese homeostasis. Might activate the transcription of the mntABCD operon
LNIPHOMF_01449 5.2e-161 lipM 6.3.1.20 H Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation
LNIPHOMF_01450 2.3e-63 yqhL P COG0607 Rhodanese-related sulfurtransferase
LNIPHOMF_01451 2.8e-287 gcvPB 1.4.4.2 E The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
LNIPHOMF_01452 3.4e-255 gcvPA 1.4.4.2 E The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
LNIPHOMF_01453 9.6e-208 gcvT 1.4.4.2, 2.1.2.10 E The glycine cleavage system catalyzes the degradation of glycine
LNIPHOMF_01454 0.0 yqhH L COG0553 Superfamily II DNA RNA helicases, SNF2 family
LNIPHOMF_01455 2.5e-152 yqhG S Bacterial protein YqhG of unknown function
LNIPHOMF_01456 1.2e-24 sinI S Anti-repressor SinI
LNIPHOMF_01457 1e-54 sinR K transcriptional
LNIPHOMF_01458 2.3e-142 tasA S Cell division protein FtsN
LNIPHOMF_01459 6.7e-59 sipW 3.4.21.89 U Signal peptidase
LNIPHOMF_01460 2.1e-116 yqxM
LNIPHOMF_01461 7.3e-54 yqzG S Protein of unknown function (DUF3889)
LNIPHOMF_01462 1.4e-26 yqzE S YqzE-like protein
LNIPHOMF_01463 3.7e-42 S ComG operon protein 7
LNIPHOMF_01464 5.5e-49 comGF U Putative Competence protein ComGF
LNIPHOMF_01465 1.1e-59 comGE
LNIPHOMF_01466 4.4e-71 gspH NU protein transport across the cell outer membrane
LNIPHOMF_01467 1.4e-47 comGC U Required for transformation and DNA binding
LNIPHOMF_01468 1.6e-175 comGB NU COG1459 Type II secretory pathway, component PulF
LNIPHOMF_01469 3.9e-201 comGA NU COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LNIPHOMF_01471 7.2e-175 corA P Mg2 transporter protein
LNIPHOMF_01472 5.2e-240 corC1 S COG1253 Hemolysins and related proteins containing CBS domains
LNIPHOMF_01473 1.7e-151 yqhA T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
LNIPHOMF_01475 2.7e-64 yqgZ 1.20.4.1 P Belongs to the ArsC family
LNIPHOMF_01476 1.8e-37 yqgY S Protein of unknown function (DUF2626)
LNIPHOMF_01477 1.9e-123 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
LNIPHOMF_01478 8.9e-23 yqgW S Protein of unknown function (DUF2759)
LNIPHOMF_01479 6.9e-50 yqgV S Thiamine-binding protein
LNIPHOMF_01480 2.7e-199 yqgU
LNIPHOMF_01481 1.4e-222 yqgT 3.4.19.11 E Gamma-D-glutamyl-L-diamino acid endopeptidase
LNIPHOMF_01482 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
LNIPHOMF_01483 5.2e-181 glcK 2.7.1.2 G Glucokinase
LNIPHOMF_01484 4.3e-33 yqgQ S Protein conserved in bacteria
LNIPHOMF_01485 1.4e-268 gluP 3.4.21.105 O membrane protein (homolog of Drosophila rhomboid)
LNIPHOMF_01486 2.5e-09 yqgO
LNIPHOMF_01487 2.7e-105 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LNIPHOMF_01488 9.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
LNIPHOMF_01489 2.9e-201 yqgM 2.4.1.11, 2.4.1.18 GH57,GT4 M Glycosyl transferases group 1
LNIPHOMF_01492 1.1e-16 ydhU P Manganese containing catalase
LNIPHOMF_01493 8.7e-78 ydhU P Catalase
LNIPHOMF_01494 7.3e-216 gmuG 3.2.1.78 GH26 G Belongs to the glycosyl hydrolase 26 family
LNIPHOMF_01495 4.2e-191 manA 5.3.1.8 G mannose-6-phosphate isomerase
LNIPHOMF_01496 9.2e-172 gmuE 2.7.1.2, 2.7.1.4 GK COG1940 Transcriptional regulator sugar kinase
LNIPHOMF_01497 3.9e-133 ydhQ K UTRA
LNIPHOMF_01498 2.4e-288 ydhP 3.2.1.21, 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LNIPHOMF_01499 2e-239 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LNIPHOMF_01500 3.5e-52 ydhN3 2.7.1.196, 2.7.1.205 G phosphotransferase system
LNIPHOMF_01501 1.1e-47 ydhM 2.7.1.196, 2.7.1.205 G phosphotransferase system
LNIPHOMF_01502 4.6e-200 pbuE EGP Major facilitator Superfamily
LNIPHOMF_01503 1.7e-99 ydhK M Protein of unknown function (DUF1541)
LNIPHOMF_01504 1.8e-184 ydhJ S Metal dependent phosphohydrolases with conserved 'HD' motif.
LNIPHOMF_01505 4.1e-86 K Acetyltransferase (GNAT) domain
LNIPHOMF_01507 4.6e-69 frataxin S Domain of unknown function (DU1801)
LNIPHOMF_01508 1.4e-259 phoB 3.1.3.1 P Belongs to the alkaline phosphatase family
LNIPHOMF_01509 1.9e-127
LNIPHOMF_01510 7e-228 ydhE CG COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
LNIPHOMF_01511 3.3e-244 ydhD M Glycosyl hydrolase
LNIPHOMF_01512 6.5e-122 ydhC K FCD
LNIPHOMF_01513 1.2e-121 ydhB S membrane transporter protein
LNIPHOMF_01514 2.5e-209 tcaB EGP Major facilitator Superfamily
LNIPHOMF_01515 1.1e-69 ydgJ K Winged helix DNA-binding domain
LNIPHOMF_01516 1e-113 drgA C nitroreductase
LNIPHOMF_01517 0.0 ydgH S drug exporters of the RND superfamily
LNIPHOMF_01518 4.7e-80 K helix_turn_helix multiple antibiotic resistance protein
LNIPHOMF_01519 4.6e-91 dinB S DinB family
LNIPHOMF_01520 4e-251 cycA E COG1113 Gamma-aminobutyrate permease and related permeases
LNIPHOMF_01521 4.2e-308 expZ S ABC transporter
LNIPHOMF_01522 2.4e-86 yycN 2.3.1.128 K Acetyltransferase
LNIPHOMF_01523 1.9e-53 S DoxX-like family
LNIPHOMF_01524 1.5e-101 K Bacterial regulatory proteins, tetR family
LNIPHOMF_01525 1.3e-41 ydgB S Spore germination protein gerPA/gerPF
LNIPHOMF_01526 1.4e-37 ydgA S Spore germination protein gerPA/gerPF
LNIPHOMF_01527 1.7e-75 cotP O Belongs to the small heat shock protein (HSP20) family
LNIPHOMF_01528 5.2e-122 ydfS S Protein of unknown function (DUF421)
LNIPHOMF_01529 4.4e-118 ydfR S Protein of unknown function (DUF421)
LNIPHOMF_01531 6.3e-29
LNIPHOMF_01532 7.1e-15 ydgA S Spore germination protein gerPA/gerPF
LNIPHOMF_01533 1.3e-57 traF CO Thioredoxin
LNIPHOMF_01534 8.8e-63 mhqP S DoxX
LNIPHOMF_01535 3.6e-187 ydfO E COG0346 Lactoylglutathione lyase and related lyases
LNIPHOMF_01536 9.6e-112 ydfN C nitroreductase
LNIPHOMF_01537 1.6e-155 fieF P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LNIPHOMF_01538 3.2e-147 K Bacterial transcription activator, effector binding domain
LNIPHOMF_01539 5.9e-118 S Protein of unknown function (DUF554)
LNIPHOMF_01540 1.9e-177 S Alpha/beta hydrolase family
LNIPHOMF_01541 0.0 ydfJ S drug exporters of the RND superfamily
LNIPHOMF_01542 1.4e-110 ydfI K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
LNIPHOMF_01543 5.3e-180 ydfH 2.7.13.3 T Histidine kinase
LNIPHOMF_01545 1.5e-79 ydfG S Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LNIPHOMF_01546 2.7e-123 ydfF K helix_turn_helix, Arsenical Resistance Operon Repressor
LNIPHOMF_01547 5.9e-117 ydfE S Flavin reductase like domain
LNIPHOMF_01548 1.9e-275 ydfD K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
LNIPHOMF_01549 1e-162 ydfC EG EamA-like transporter family
LNIPHOMF_01550 7.2e-149 ydfB J GNAT acetyltransferase
LNIPHOMF_01551 5.2e-232 arsB P Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LNIPHOMF_01552 1.3e-57 arsR K transcriptional
LNIPHOMF_01553 8.4e-105 ydeS K Transcriptional regulator
LNIPHOMF_01554 1.2e-195 ydeR EGP Major facilitator Superfamily
LNIPHOMF_01555 1.6e-108 ydeQ S NADPH-quinone reductase (modulator of drug activity B)
LNIPHOMF_01556 4.8e-69 ydeP K Transcriptional regulator
LNIPHOMF_01557 1.9e-153 yqfU S Uncharacterized protein conserved in bacteria (DUF2179)
LNIPHOMF_01558 1.1e-58 K HxlR-like helix-turn-helix
LNIPHOMF_01559 8.6e-107 ydeN S Serine hydrolase
LNIPHOMF_01560 4.2e-74 maoC I N-terminal half of MaoC dehydratase
LNIPHOMF_01561 1.5e-274 ydeL K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
LNIPHOMF_01562 1.8e-153 ydeK EG -transporter
LNIPHOMF_01563 4e-116
LNIPHOMF_01564 8.9e-107 ydeI S Bacteriocin-protection, YdeI or OmpD-Associated
LNIPHOMF_01565 7.8e-08
LNIPHOMF_01574 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
LNIPHOMF_01575 3.6e-197 glgC 2.7.7.27 G Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LNIPHOMF_01576 1.3e-177 glgD 2.4.1.21, 2.7.7.27 GT5 G Glucose-1-phosphate adenylyltransferase, GlgD subunit
LNIPHOMF_01577 4.3e-288 glgA 2.4.1.21 GT5 G Synthesizes alpha-1,4-glucan chains using ADP-glucose
LNIPHOMF_01578 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
LNIPHOMF_01579 9.9e-77 tspO T membrane
LNIPHOMF_01580 1.8e-206 cotI S Spore coat protein
LNIPHOMF_01581 1.8e-217 cotSA M Glycosyl transferases group 1
LNIPHOMF_01582 2.3e-206 cotS S Seems to be required for the assembly of the CotSA protein in spores
LNIPHOMF_01584 3.6e-235 ytcC M Glycosyltransferase Family 4
LNIPHOMF_01585 3.9e-181 ytcB 5.1.3.2 M NAD-dependent epimerase dehydratase
LNIPHOMF_01586 1.5e-244 ugd 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
LNIPHOMF_01587 1e-153 galU 2.7.7.9 M Nucleotidyl transferase
LNIPHOMF_01588 2.6e-132 dksA T COG1734 DnaK suppressor protein
LNIPHOMF_01589 8.5e-273 menF 5.4.4.2 HQ Isochorismate synthase
LNIPHOMF_01590 0.0 menD 2.2.1.9 H Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
LNIPHOMF_01591 3.8e-156 menH 4.2.99.20 S Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC)
LNIPHOMF_01592 4.2e-155 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
LNIPHOMF_01593 2.4e-278 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
LNIPHOMF_01594 1.4e-214 menC 4.2.1.113 H Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)
LNIPHOMF_01595 1.8e-170 troA P Belongs to the bacterial solute-binding protein 9 family
LNIPHOMF_01596 1.2e-140 mntB P 'COG1121 ABC-type Mn Zn transport systems, ATPase component'
LNIPHOMF_01597 3.2e-234 mntC P COG1108 ABC-type Mn2 Zn2 transport systems, permease components
LNIPHOMF_01598 1.4e-151 troD P 'COG1108 ABC-type Mn2 Zn2 transport systems, permease components'
LNIPHOMF_01599 1.1e-24 S Domain of Unknown Function (DUF1540)
LNIPHOMF_01600 7.3e-189 cydB 1.10.3.14 C COG1294 Cytochrome bd-type quinol oxidase, subunit 2
LNIPHOMF_01601 4.7e-249 cydA 1.10.3.14 C oxidase, subunit
LNIPHOMF_01602 3.6e-41 rpmE2 J Ribosomal protein L31
LNIPHOMF_01603 5.7e-103 ytiB 4.2.1.1 P Reversible hydration of carbon dioxide
LNIPHOMF_01604 1.6e-87 luxS 4.4.1.21 T Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
LNIPHOMF_01605 3.6e-73 ytkA S YtkA-like
LNIPHOMF_01607 2.1e-76 dps P Belongs to the Dps family
LNIPHOMF_01608 5.4e-63 ytkC S Bacteriophage holin family
LNIPHOMF_01609 2.8e-87 ytkD 3.6.1.55 L Belongs to the Nudix hydrolase family
LNIPHOMF_01610 1.8e-142 ytlD P COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
LNIPHOMF_01611 1.4e-144 ytlC P ABC transporter
LNIPHOMF_01612 5e-190 ytlA P COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components
LNIPHOMF_01613 5.5e-149 ytmA E COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases
LNIPHOMF_01614 1.2e-38 ytmB S Protein of unknown function (DUF2584)
LNIPHOMF_01615 2.2e-311 pckA 4.1.1.49 C Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
LNIPHOMF_01616 4.3e-225 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LNIPHOMF_01617 0.0 asnB 6.3.5.4 E Asparagine synthase
LNIPHOMF_01618 8.4e-257 ytnA E COG1113 Gamma-aminobutyrate permease and related permeases
LNIPHOMF_01619 1.6e-59 ytoA S COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LNIPHOMF_01620 3.3e-149 ytpA 3.1.1.5 I Alpha beta hydrolase
LNIPHOMF_01621 2e-216 ytpB 4.2.3.130 S Tetraprenyl-beta-curcumene synthase
LNIPHOMF_01622 3.3e-106 ytqB J Putative rRNA methylase
LNIPHOMF_01623 2.1e-190 yhcC S Fe-S oxidoreductase
LNIPHOMF_01624 6.7e-41 ytzC S Protein of unknown function (DUF2524)
LNIPHOMF_01626 5.1e-66 ytrA K GntR family transcriptional regulator
LNIPHOMF_01627 1.1e-161 ytrB P abc transporter atp-binding protein
LNIPHOMF_01628 6.1e-169 P ABC-2 family transporter protein
LNIPHOMF_01629 5.9e-148
LNIPHOMF_01630 3.1e-127 ytrE V ABC transporter, ATP-binding protein
LNIPHOMF_01631 8.5e-235 ytrF V COG0577 ABC-type antimicrobial peptide transport system, permease component
LNIPHOMF_01632 5.2e-130 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LNIPHOMF_01633 5.6e-186 T PhoQ Sensor
LNIPHOMF_01634 1.1e-138 bceA V ABC transporter, ATP-binding protein
LNIPHOMF_01635 0.0 bceB V ABC transporter (permease)
LNIPHOMF_01636 1.8e-43 yttA 2.7.13.3 S Pfam Transposase IS66
LNIPHOMF_01637 2.1e-211 yttB EGP Major facilitator Superfamily
LNIPHOMF_01638 6e-143 pfyP T Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
LNIPHOMF_01639 2.2e-122 ywcC K transcriptional regulator
LNIPHOMF_01640 9.5e-60 gtcA S GtrA-like protein
LNIPHOMF_01641 6.2e-229 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
LNIPHOMF_01642 3.7e-306 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
LNIPHOMF_01643 1e-35 ywzA S membrane
LNIPHOMF_01644 2.1e-177 cyoA 1.10.3.10, 1.10.3.12 C Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I
LNIPHOMF_01645 0.0 qoxB 1.10.3.12, 1.9.3.1 C Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LNIPHOMF_01646 1.2e-111 qoxC 1.10.3.12, 1.9.3.1 C quinol oxidase, subunit
LNIPHOMF_01647 2.6e-64 qoxD 1.10.3.12, 1.9.3.1 C quinol oxidase, subunit
LNIPHOMF_01648 6e-39 ywcE S Required for proper spore morphogenesis. Important for spore germination
LNIPHOMF_01649 2.9e-202 rodA D Belongs to the SEDS family
LNIPHOMF_01650 7.2e-138 nfrA 1.5.1.38, 1.5.1.39 C Oxidoreductase
LNIPHOMF_01651 5.1e-187 ywcH C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LNIPHOMF_01652 0.0 vpr O Belongs to the peptidase S8 family
LNIPHOMF_01654 2.4e-150 sacT K transcriptional antiterminator
LNIPHOMF_01655 1e-139 focA P Formate/nitrite transporter
LNIPHOMF_01656 3.9e-254 scrA 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
LNIPHOMF_01657 9.5e-296 scrB 3.2.1.26, 3.2.1.65, 3.2.1.80 GH32 G invertase
LNIPHOMF_01658 2e-28 ywdA
LNIPHOMF_01659 9.3e-147 thiD 2.5.1.3, 2.7.1.35, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
LNIPHOMF_01660 1.3e-57 pex K Transcriptional regulator PadR-like family
LNIPHOMF_01661 1.4e-113 ywdD
LNIPHOMF_01663 1.1e-152 ywdF GT2,GT4 S Glycosyltransferase like family 2
LNIPHOMF_01664 5e-130 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LNIPHOMF_01665 5.9e-263 ywdH 1.2.1.3 C Belongs to the aldehyde dehydrogenase family
LNIPHOMF_01666 7.7e-49 ywdI S Family of unknown function (DUF5327)
LNIPHOMF_01667 1.3e-238 ywdJ F Xanthine uracil
LNIPHOMF_01668 4.3e-59 ywdK S small membrane protein
LNIPHOMF_01669 4.8e-75 gerQ S Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA
LNIPHOMF_01670 2.8e-145 spsA M Spore Coat
LNIPHOMF_01671 1.5e-269 spsB M Capsule polysaccharide biosynthesis protein
LNIPHOMF_01672 1.6e-224 spsC E Belongs to the DegT DnrJ EryC1 family
LNIPHOMF_01673 4e-164 spsD 2.3.1.210 K Spore Coat
LNIPHOMF_01674 3.2e-214 spsE 2.5.1.56 M acid synthase
LNIPHOMF_01675 9.7e-132 spsF M Spore Coat
LNIPHOMF_01676 1.7e-190 spsG M Spore Coat
LNIPHOMF_01677 1.9e-138 spsI 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LNIPHOMF_01678 1e-181 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
LNIPHOMF_01679 5.3e-161 spsK 1.1.1.133 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
LNIPHOMF_01680 3.5e-87 spsL 5.1.3.13 M Spore Coat
LNIPHOMF_01681 1.8e-78
LNIPHOMF_01682 7.5e-244 rocG 1.4.1.2, 1.4.1.3 E Belongs to the Glu Leu Phe Val dehydrogenases family
LNIPHOMF_01683 1.4e-297 putA 1.2.1.88, 1.5.5.2 C Belongs to the aldehyde dehydrogenase family. RocA subfamily
LNIPHOMF_01684 0.0 rocB E arginine degradation protein
LNIPHOMF_01685 5.1e-251 lysP E amino acid
LNIPHOMF_01686 4.6e-206 ywfA EGP Major facilitator Superfamily
LNIPHOMF_01687 8.6e-113 pheA 1.1.1.3, 1.3.1.12, 4.1.1.100, 4.2.1.51, 5.4.99.5 E Part of the bacABCDEF operon responsible for the biosynthesis of the nonribosomally synthesized dipeptide antibiotic bacilysin, composed of L-alanine and L-anticapsin. Bacilysin is an irreversible inactivator of the glutaminase domain of glucosamine synthetase. BacA is an unusual prephenate decarboxylase that avoids the typical aromatization of the cyclohexadienol ring of prephenate. BacA catalyzes the protonation of prephenate (1-carboxy-4-hydroxy-alpha-oxo-2,5-cyclohexadiene-1- propanoic acid) at C6 position, followed by a decarboxylation to produce the endocyclic-delta(4),delta(8)-7R-dihydro- hydroxyphenylpyruvate (en-H2HPP). En-H2HPP is able to undergo a slow nonenzymatic isomerization to produce the exocyclic- delta(3),delta(5)-dihydro-hydroxyphenylpyruvate (ex-H2HPP). BacA isomerizes only the pro-R double bond in prephenate
LNIPHOMF_01688 1.3e-136 bacB 5.3.3.19, 5.4.99.5 S Part of the bacABCDEF operon responsible for the biosynthesis of the nonribosomally synthesized dipeptide antibiotic bacilysin, composed of L-alanine and L-anticapsin. Bacilysin is an irreversible inactivator of the glutaminase domain of glucosamine synthetase. BacB catalyzes the allylic isomerization of the
LNIPHOMF_01689 1.3e-139 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LNIPHOMF_01690 3.6e-271 purD 6.3.2.49, 6.3.4.13 F Part of the bacABCDEFG operon responsible for the biosynthesis of bacilysin, an irreversible inactivator of the glutaminase domain of glucosamine synthetase. Catalyzes the formation of alpha-dipeptides from various L-amino acids in the presence of ATP. In vivo catalyzes the ligation of L-alanine and L-anticapsin (epoxycyclohexanonyl-Ala) to produce the final bacilysin antibiotic (L-Ala-L-4S-cyclohexenonyl-Ala dipeptide)
LNIPHOMF_01691 2.9e-210 bacE EGP Major facilitator Superfamily
LNIPHOMF_01692 2.7e-235 ywfG 2.6.1.83 E Aminotransferase class I and II
LNIPHOMF_01693 4e-139 IQ Enoyl-(Acyl carrier protein) reductase
LNIPHOMF_01694 1.1e-146 ywfI C May function as heme-dependent peroxidase
LNIPHOMF_01695 6.6e-176 pta 2.3.1.19, 2.3.1.8, 3.6.3.21 C In Salmonella this enzyme is required for ethanolamine catabolism
LNIPHOMF_01696 9.2e-164 cysL K Transcriptional regulator
LNIPHOMF_01697 6.6e-156 lipL 2.3.1.200, 2.3.1.204 H Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes
LNIPHOMF_01698 5.2e-159 ywfM EG EamA-like transporter family
LNIPHOMF_01699 1.6e-111 rsfA_1
LNIPHOMF_01700 3.1e-36 ywzC S Belongs to the UPF0741 family
LNIPHOMF_01701 1.8e-256 ywfO S COG1078 HD superfamily phosphohydrolases
LNIPHOMF_01702 5.4e-89 ywgA 2.1.1.72, 3.1.21.3
LNIPHOMF_01703 2.8e-79 yffB K Transcriptional regulator
LNIPHOMF_01704 2.6e-242 mmr U Major Facilitator Superfamily
LNIPHOMF_01706 4.4e-132 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LNIPHOMF_01707 6.6e-65 yueC S Family of unknown function (DUF5383)
LNIPHOMF_01708 0.0 esaA S type VII secretion protein EsaA
LNIPHOMF_01709 0.0 essC D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
LNIPHOMF_01710 2.3e-211 essB S WXG100 protein secretion system (Wss), protein YukC
LNIPHOMF_01711 7.7e-41 yukD S WXG100 protein secretion system (Wss), protein YukD
LNIPHOMF_01712 2.8e-45 esxA S Belongs to the WXG100 family
LNIPHOMF_01713 6.5e-229 yukF QT Transcriptional regulator
LNIPHOMF_01714 1.2e-205 ald 1.4.1.1 E Belongs to the AlaDH PNT family
LNIPHOMF_01715 1.1e-132 yukJ S Uncharacterized conserved protein (DUF2278)
LNIPHOMF_01716 3.8e-36 mbtH S MbtH-like protein
LNIPHOMF_01717 0.0 dhbF Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LNIPHOMF_01718 1.4e-178 entB 3.3.2.1, 6.3.2.14 Q Isochorismatase family
LNIPHOMF_01719 0.0 entE 2.7.7.58, 6.3.2.14 Q 2,3-dihydroxybenzoate-AMP ligase
LNIPHOMF_01720 2.3e-226 entC 5.4.4.2 HQ Isochorismate synthase
LNIPHOMF_01721 7.3e-141 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
LNIPHOMF_01722 1.3e-167 besA S Putative esterase
LNIPHOMF_01723 5.8e-122 yuiH S Oxidoreductase molybdopterin binding domain
LNIPHOMF_01724 1.1e-93 bioY S Biotin biosynthesis protein
LNIPHOMF_01725 3.9e-211 yuiF S antiporter
LNIPHOMF_01726 1.5e-280 pepA 3.4.11.1, 3.4.11.5 E Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LNIPHOMF_01727 1.2e-77 yuiD S protein conserved in bacteria
LNIPHOMF_01728 5.6e-118 yuiC S protein conserved in bacteria
LNIPHOMF_01729 8.4e-27 yuiB S Putative membrane protein
LNIPHOMF_01730 2.5e-236 yumB 1.6.99.3 C NADH dehydrogenase
LNIPHOMF_01731 3.5e-188 yumC 1.18.1.2, 1.19.1.1 C reductase
LNIPHOMF_01733 4.9e-187 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
LNIPHOMF_01734 9e-118 paiB K Putative FMN-binding domain
LNIPHOMF_01735 4.7e-72 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LNIPHOMF_01736 3.7e-63 erpA S Belongs to the HesB IscA family
LNIPHOMF_01737 2.2e-162 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
LNIPHOMF_01738 2.4e-199 yutK F Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LNIPHOMF_01739 3.2e-39 yuzB S Belongs to the UPF0349 family
LNIPHOMF_01740 1.2e-199 yutJ 1.6.99.3 C NADH dehydrogenase
LNIPHOMF_01741 3.5e-57 yuzD S protein conserved in bacteria
LNIPHOMF_01742 1.2e-35 yutI O COG0694 Thioredoxin-like proteins and domains
LNIPHOMF_01743 0.0 yuxL 3.4.14.5, 3.4.19.1 EU peptidase
LNIPHOMF_01744 8.6e-173 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
LNIPHOMF_01745 2.3e-198 thrC 4.2.3.1 E Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
LNIPHOMF_01746 2.7e-241 hom 1.1.1.3 E homoserine dehydrogenase
LNIPHOMF_01747 2e-199 yutH S Spore coat protein
LNIPHOMF_01748 2.5e-77 pgpA 3.1.3.27 I COG1267 Phosphatidylglycerophosphatase A and related proteins
LNIPHOMF_01749 6.5e-142 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
LNIPHOMF_01750 1e-75 yutE S Protein of unknown function DUF86
LNIPHOMF_01751 9.7e-48 yutD S protein conserved in bacteria
LNIPHOMF_01752 4.9e-111 yutC S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
LNIPHOMF_01753 1e-167 lipA 2.8.1.8 H Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
LNIPHOMF_01754 4.5e-196 lytH M Peptidase, M23
LNIPHOMF_01755 8.4e-134 yunB S Sporulation protein YunB (Spo_YunB)
LNIPHOMF_01756 4.8e-48 yunC S Domain of unknown function (DUF1805)
LNIPHOMF_01757 5.8e-266 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
LNIPHOMF_01758 2e-141 yunE S membrane transporter protein
LNIPHOMF_01759 4.3e-171 yunF S Protein of unknown function DUF72
LNIPHOMF_01760 3e-62 yunG
LNIPHOMF_01761 1e-259 allB 3.5.2.5 F Catalyzes the conversion of allantoin (5- ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring
LNIPHOMF_01762 2.2e-131 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LNIPHOMF_01763 1.1e-170 mdh 1.1.1.37 C Catalyzes the reversible oxidation of malate to oxaloacetate
LNIPHOMF_01764 1.8e-242 icd 1.1.1.42 C isocitrate
LNIPHOMF_01765 4.7e-210 citZ 2.3.3.1 C Belongs to the citrate synthase family
LNIPHOMF_01766 4.7e-71 yeaL S membrane
LNIPHOMF_01767 2.6e-192 ytvI S sporulation integral membrane protein YtvI
LNIPHOMF_01768 1.8e-63 fxsA S COG3030 Protein affecting phage T7 exclusion by the F plasmid
LNIPHOMF_01769 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
LNIPHOMF_01770 3.4e-180 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
LNIPHOMF_01771 4.3e-183 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
LNIPHOMF_01772 8.4e-162 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
LNIPHOMF_01773 1.5e-225 ytsJ 1.1.1.38 C Malate dehydrogenase
LNIPHOMF_01774 0.0 dnaE 2.7.7.7 L DNA polymerase
LNIPHOMF_01775 3.2e-56 ytrH S Sporulation protein YtrH
LNIPHOMF_01776 8.2e-69 ytrI
LNIPHOMF_01777 9.2e-29
LNIPHOMF_01778 7.8e-182 nrnA 3.1.13.3, 3.1.3.7 S COG0618 Exopolyphosphatase-related proteins
LNIPHOMF_01779 2.4e-47 ytpI S YtpI-like protein
LNIPHOMF_01780 8e-241 ytoI K transcriptional regulator containing CBS domains
LNIPHOMF_01781 1.2e-158 ytnM S membrane transporter protein
LNIPHOMF_01782 4.9e-240 ytnL 3.5.1.47 E hydrolase activity
LNIPHOMF_01783 6.3e-128 ribF 2.7.1.26, 2.7.7.2 H Riboflavin kinase
LNIPHOMF_01784 1e-256 moxC C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LNIPHOMF_01785 2.9e-47 ytnI O COG0695 Glutaredoxin and related proteins
LNIPHOMF_01786 1.2e-185 ytmO C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LNIPHOMF_01787 1e-142 tcyN 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
LNIPHOMF_01788 7.6e-121 tcyM U Binding-protein-dependent transport system inner membrane component
LNIPHOMF_01789 3.7e-123 tcyL P Binding-protein-dependent transport system inner membrane component
LNIPHOMF_01790 1.5e-149 tcyK M Bacterial periplasmic substrate-binding proteins
LNIPHOMF_01791 9.5e-152 tcyK ET Bacterial periplasmic substrate-binding proteins
LNIPHOMF_01792 1.5e-100 ytmI K Acetyltransferase (GNAT) domain
LNIPHOMF_01793 2.9e-173 ytlI K LysR substrate binding domain
LNIPHOMF_01794 1.7e-130 ytkL S Belongs to the UPF0173 family
LNIPHOMF_01795 1.1e-141 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LNIPHOMF_01797 3.1e-267 argH 4.3.2.1 E argininosuccinate lyase
LNIPHOMF_01798 2.3e-234 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
LNIPHOMF_01799 3.6e-88 moaB 2.7.7.75 H May be involved in the biosynthesis of molybdopterin
LNIPHOMF_01800 3.7e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LNIPHOMF_01801 7e-165 ytxK 2.1.1.72 L DNA methylase
LNIPHOMF_01802 2.4e-89 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
LNIPHOMF_01803 8.7e-70 ytfJ S Sporulation protein YtfJ
LNIPHOMF_01804 5.6e-116 ytfI S Protein of unknown function (DUF2953)
LNIPHOMF_01805 1.3e-87 yteJ S RDD family
LNIPHOMF_01806 2.4e-181 sppA OU signal peptide peptidase SppA
LNIPHOMF_01807 2.2e-148 nadK 2.7.1.23 G Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LNIPHOMF_01808 0.0 ytcJ S amidohydrolase
LNIPHOMF_01809 2e-307 acsA 6.2.1.1, 6.2.1.2 I COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
LNIPHOMF_01810 2e-29 sspB S spore protein
LNIPHOMF_01811 3.5e-227 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LNIPHOMF_01812 2.2e-210 iscS2 2.8.1.7 E Cysteine desulfurase
LNIPHOMF_01813 4.9e-238 brnQ E Component of the transport system for branched-chain amino acids
LNIPHOMF_01814 4.1e-274 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
LNIPHOMF_01815 1.6e-154 hisK 3.1.3.15 E COG1387 Histidinol phosphatase and related hydrolases of the PHP family
LNIPHOMF_01816 3.4e-109 yttP K Transcriptional regulator
LNIPHOMF_01817 1.2e-88 ytsP 1.8.4.14 T GAF domain-containing protein
LNIPHOMF_01818 0.0 ytrP 2.7.7.65 T COG2199 FOG GGDEF domain
LNIPHOMF_01819 2.5e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LNIPHOMF_01821 3.6e-238 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LNIPHOMF_01822 5.3e-294 acsA 6.2.1.1 I COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
LNIPHOMF_01823 1.3e-63 hxlR K transcriptional
LNIPHOMF_01824 3.3e-107 hxlA 4.1.2.43 G 3-hexulose-6-phosphate synthase
LNIPHOMF_01825 4.6e-97 hxlB 4.1.2.43, 5.3.1.27 G SIS domain
LNIPHOMF_01826 3e-187 tlpC 2.7.13.3 NT chemotaxis protein
LNIPHOMF_01827 3.2e-72 nucA M Deoxyribonuclease NucA/NucB
LNIPHOMF_01828 3.4e-70 nin S Competence protein J (ComJ)
LNIPHOMF_01829 1.2e-298 yckE 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LNIPHOMF_01830 3.5e-52 yckD S Protein of unknown function (DUF2680)
LNIPHOMF_01831 3.3e-77 yckC S membrane
LNIPHOMF_01834 1.1e-132 yckB ET COG0834 ABC-type amino acid transport signal transduction systems, periplasmic component domain
LNIPHOMF_01835 2.4e-116 yecS P COG0765 ABC-type amino acid transport system, permease component
LNIPHOMF_01836 1.4e-228 yciC S GTPases (G3E family)
LNIPHOMF_01837 5.5e-109 yciB M ErfK YbiS YcfS YnhG
LNIPHOMF_01838 1.4e-172 folE2 3.5.4.16 S Converts GTP to 7,8-dihydroneopterin triphosphate
LNIPHOMF_01839 7.6e-222 nasA P COG2223 Nitrate nitrite transporter
LNIPHOMF_01840 0.0 nirB 1.7.1.15 C Assimilatory nitrate reductase (electron transfer subunit)
LNIPHOMF_01841 0.0 nasC C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
LNIPHOMF_01842 0.0 nirB 1.7.1.15 C Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LNIPHOMF_01843 4.6e-57 nirD 1.7.1.15 P Nitrite reductase
LNIPHOMF_01844 9.3e-283 cobA 2.1.1.107, 4.2.1.75 H Belongs to the precorrin methyltransferase family
LNIPHOMF_01845 1.3e-193 ycgT 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
LNIPHOMF_01846 5.7e-163 I alpha/beta hydrolase fold
LNIPHOMF_01847 1.2e-139 ycgR S permeases
LNIPHOMF_01848 2.6e-147 ycgQ S membrane
LNIPHOMF_01849 1.6e-227 ycgP QT COG2508 Regulator of polyketide synthase expression
LNIPHOMF_01850 1.2e-261 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LNIPHOMF_01851 7.3e-294 rocA 1.2.1.88, 1.5.5.2 C Belongs to the aldehyde dehydrogenase family. RocA subfamily
LNIPHOMF_01852 5.1e-170 ycgM E Proline dehydrogenase
LNIPHOMF_01853 2.9e-145 ycgL S Predicted nucleotidyltransferase
LNIPHOMF_01854 2.9e-184 cah 3.1.1.41 Q Acetyl xylan esterase (AXE1)
LNIPHOMF_01855 2.2e-179 oxyR3 K LysR substrate binding domain
LNIPHOMF_01856 3.6e-145 yafE Q ubiE/COQ5 methyltransferase family
LNIPHOMF_01857 3e-104 aroK 2.7.1.71, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LNIPHOMF_01858 2.5e-109 tmrB S AAA domain
LNIPHOMF_01859 1.5e-149 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
LNIPHOMF_01860 2.4e-112 ycgI S Domain of unknown function (DUF1989)
LNIPHOMF_01861 5.6e-250 ycgH E COG1113 Gamma-aminobutyrate permease and related permeases
LNIPHOMF_01862 1.2e-151 yqcI S YqcI/YcgG family
LNIPHOMF_01863 6.8e-113 ycgF E Lysine exporter protein LysE YggA
LNIPHOMF_01864 3.4e-77 emrR K helix_turn_helix multiple antibiotic resistance protein
LNIPHOMF_01865 6.2e-269 mdr EGP Major facilitator Superfamily
LNIPHOMF_01866 6.5e-293 lctP C L-lactate permease
LNIPHOMF_01867 3.3e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
LNIPHOMF_01868 0.0 amyE 3.2.1.1 GH13 G alpha-amylase
LNIPHOMF_01869 1.1e-98 ycgB
LNIPHOMF_01870 1e-257 ycgA S Membrane
LNIPHOMF_01871 1.2e-219 amhX S amidohydrolase
LNIPHOMF_01872 5.3e-164 opuAC E glycine betaine
LNIPHOMF_01873 1.3e-127 opuAB P glycine betaine
LNIPHOMF_01874 5.1e-229 proV 3.6.3.32 E glycine betaine
LNIPHOMF_01875 1.6e-45 K helix_turn_helix, Arsenical Resistance Operon Repressor
LNIPHOMF_01876 1.9e-209 yceJ EGP Uncharacterised MFS-type transporter YbfB
LNIPHOMF_01877 1e-218 naiP P Uncharacterised MFS-type transporter YbfB
LNIPHOMF_01878 2e-192 yceH P Belongs to the TelA family
LNIPHOMF_01879 0.0 yceG S Putative component of 'biosynthetic module'
LNIPHOMF_01880 6.3e-137 terC P Protein of unknown function (DUF475)
LNIPHOMF_01881 4.6e-108 yceE T proteins involved in stress response, homologs of TerZ and
LNIPHOMF_01882 2.8e-105 yceD T proteins involved in stress response, homologs of TerZ and
LNIPHOMF_01883 3.9e-110 yceC 3.5.4.33 T proteins involved in stress response, homologs of TerZ and
LNIPHOMF_01884 5.4e-189 yceB C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LNIPHOMF_01885 1.7e-135 adcB P COG1108 ABC-type Mn2 Zn2 transport systems, permease components
LNIPHOMF_01886 2.5e-132 adcC P 'COG1121 ABC-type Mn Zn transport systems, ATPase component'
LNIPHOMF_01887 6.6e-168 adcA P Belongs to the bacterial solute-binding protein 9 family
LNIPHOMF_01888 0.0 ycdG 3.2.1.10 GH13 G COG0366 Glycosidases
LNIPHOMF_01889 1.6e-140 IQ Enoyl-(Acyl carrier protein) reductase
LNIPHOMF_01890 5.5e-174 S response regulator aspartate phosphatase
LNIPHOMF_01891 1.7e-95 cwlK M D-alanyl-D-alanine carboxypeptidase
LNIPHOMF_01892 6.7e-268 ycdC K Belongs to the sigma-70 factor family. ECF subfamily
LNIPHOMF_01893 5.9e-282 ycdB K Belongs to the sigma-70 factor family. ECF subfamily
LNIPHOMF_01894 6.6e-177 ycdA S Domain of unknown function (DUF5105)
LNIPHOMF_01895 1.6e-174 yccK C Aldo keto reductase
LNIPHOMF_01896 4.5e-203 natB CP ABC-2 family transporter protein
LNIPHOMF_01897 4.1e-133 natA 3.6.3.7 CP ATPases associated with a variety of cellular activities
LNIPHOMF_01898 1.2e-126 lytR_2 T LytTr DNA-binding domain
LNIPHOMF_01899 2e-161 2.7.13.3 T GHKL domain
LNIPHOMF_01900 9.5e-200 yccF K DNA-templated transcriptional preinitiation complex assembly
LNIPHOMF_01901 2e-59 S RDD family
LNIPHOMF_01902 5.6e-115 lip 3.1.1.3 S acetyltransferases and hydrolases with the alpha beta hydrolase fold
LNIPHOMF_01903 2.2e-202 ansB 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
LNIPHOMF_01904 4.8e-102 yxaF K Transcriptional regulator
LNIPHOMF_01905 5.8e-229 lmrB EGP the major facilitator superfamily
LNIPHOMF_01906 6.2e-210 ycbU E Selenocysteine lyase
LNIPHOMF_01907 1.4e-121 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
LNIPHOMF_01908 1.2e-124 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LNIPHOMF_01909 5e-28 tatA U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
LNIPHOMF_01910 0.0 phoD 3.1.3.1 P COG3540 Phosphodiesterase alkaline phosphatase D
LNIPHOMF_01911 6.6e-136 ycbR T vWA found in TerF C terminus
LNIPHOMF_01912 1.3e-78 sleB 3.5.1.28 M Cell wall
LNIPHOMF_01913 8.2e-53 ycbP S Protein of unknown function (DUF2512)
LNIPHOMF_01914 2.1e-115 S ABC-2 family transporter protein
LNIPHOMF_01915 4.8e-168 ycbN V ABC transporter, ATP-binding protein
LNIPHOMF_01916 2.4e-170 T PhoQ Sensor
LNIPHOMF_01917 1.7e-125 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LNIPHOMF_01918 7.3e-172 eamA1 EG spore germination
LNIPHOMF_01919 4.4e-24 rtpA K Tryptophan RNA-binding attenuator protein inhibitory protein
LNIPHOMF_01920 1.8e-178 ycbJ S Macrolide 2'-phosphotransferase
LNIPHOMF_01921 3.7e-298 garD 4.2.1.42, 4.2.1.7 G Altronate
LNIPHOMF_01922 1.5e-124 ycbG K FCD
LNIPHOMF_01923 2.2e-270 gudD 4.2.1.40 M Belongs to the mandelate racemase muconate lactonizing enzyme family
LNIPHOMF_01924 1.2e-255 gudP G COG0477 Permeases of the major facilitator superfamily
LNIPHOMF_01925 3.7e-274 ycbD C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
LNIPHOMF_01926 2.7e-174 kdgD 4.2.1.41 EM 5-dehydro-4-deoxyglucarate dehydratase activity
LNIPHOMF_01927 9e-170 glnL T Regulator
LNIPHOMF_01928 1.5e-229 phoQ 2.7.13.3 T Histidine kinase
LNIPHOMF_01929 1.5e-188 glsA 3.5.1.2 E Belongs to the glutaminase family
LNIPHOMF_01930 2.3e-257 agcS E Sodium alanine symporter
LNIPHOMF_01931 9.3e-183 mmuM 1.5.1.20, 2.1.1.10 H homocysteine
LNIPHOMF_01932 6.7e-262 mmuP E amino acid
LNIPHOMF_01933 5.5e-203 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
LNIPHOMF_01935 4.9e-128 K UTRA
LNIPHOMF_01936 2.1e-137 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
LNIPHOMF_01937 0.0 ptsG 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
LNIPHOMF_01938 4.9e-216 gltP C Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
LNIPHOMF_01939 3.9e-192 yceA S Belongs to the UPF0176 family
LNIPHOMF_01940 6.7e-167 ybfP K Transcriptional regulator
LNIPHOMF_01941 4.3e-258 S Erythromycin esterase
LNIPHOMF_01942 3.2e-46 ybfN
LNIPHOMF_01943 5.6e-149 psd 4.1.1.65 I Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)
LNIPHOMF_01944 2.7e-85 ybfM S SNARE associated Golgi protein
LNIPHOMF_01945 3.2e-95 pssA 2.7.8.8 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LNIPHOMF_01946 2.5e-169 S Alpha/beta hydrolase family
LNIPHOMF_01948 6.9e-178 mpr 3.4.21.19 M Belongs to the peptidase S1B family
LNIPHOMF_01949 1.9e-214 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
LNIPHOMF_01950 2.3e-145 msmR K AraC-like ligand binding domain
LNIPHOMF_01951 8.8e-162 ybfH EG EamA-like transporter family
LNIPHOMF_01952 0.0 ybfG 3.2.1.132 M Domain of unknown function (DUF1906)
LNIPHOMF_01954 2.2e-88 cotE S Spore coat protein
LNIPHOMF_01955 9.2e-69 ymcA 3.6.3.21 S Belongs to the UPF0342 family
LNIPHOMF_01956 2.7e-296 miaB 2.8.4.3 J Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LNIPHOMF_01957 6.5e-218 kbl 2.3.1.29, 2.3.1.47 H Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
LNIPHOMF_01958 2.7e-199 tdh 1.1.1.103 C Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate
LNIPHOMF_01959 1.2e-36 spoVS S Stage V sporulation protein S
LNIPHOMF_01960 1.9e-152 ymdB S protein conserved in bacteria
LNIPHOMF_01961 2.1e-224 rny S Endoribonuclease that initiates mRNA decay
LNIPHOMF_01962 1e-215 pbpX V Beta-lactamase
LNIPHOMF_01963 8.1e-188 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LNIPHOMF_01964 1.9e-236 cinA 3.5.1.42 S Belongs to the CinA family
LNIPHOMF_01965 2.5e-101 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LNIPHOMF_01966 1.9e-124 ymfM S protein conserved in bacteria
LNIPHOMF_01967 2.7e-143 ymfK S Protein of unknown function (DUF3388)
LNIPHOMF_01968 4.8e-41 ymfJ S Protein of unknown function (DUF3243)
LNIPHOMF_01969 9.2e-130 ymfI 1.1.1.100, 1.3.1.28 S Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
LNIPHOMF_01970 1.4e-242 ymfH S zinc protease
LNIPHOMF_01971 2.6e-236 ymfF S Peptidase M16
LNIPHOMF_01972 1.5e-206 ymfD EGP Major facilitator Superfamily
LNIPHOMF_01973 1.4e-133 ymfC K Transcriptional regulator
LNIPHOMF_01974 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
LNIPHOMF_01975 4.4e-32 S YlzJ-like protein
LNIPHOMF_01976 5.3e-133 tepA 3.4.21.92 OU COG0740 Protease subunit of ATP-dependent Clp proteases
LNIPHOMF_01977 1.9e-308 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LNIPHOMF_01978 1.4e-156 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LNIPHOMF_01979 5.9e-222 dapG 1.1.1.3, 2.7.2.4 E Belongs to the aspartokinase family
LNIPHOMF_01980 1.4e-192 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LNIPHOMF_01981 4.3e-109 spoVFB H Together with DpaA, catalyzes the conversion of dihydrodipicolinate to dipicolinate (DPA)
LNIPHOMF_01982 2.9e-162 spoVFA 1.1.1.29, 1.1.1.399, 1.1.1.95 CH Dipicolinate synthase subunit A
LNIPHOMF_01983 2.6e-42 ymxH S YlmC YmxH family
LNIPHOMF_01984 4.4e-233 pepR S Belongs to the peptidase M16 family
LNIPHOMF_01985 4.2e-183 ylxY 3.5.1.104 G Sporulation protein, polysaccharide deacetylase
LNIPHOMF_01986 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
LNIPHOMF_01987 6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LNIPHOMF_01988 6.1e-182 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
LNIPHOMF_01989 1.3e-173 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LNIPHOMF_01990 5e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LNIPHOMF_01991 3e-44 ylxP S protein conserved in bacteria
LNIPHOMF_01992 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LNIPHOMF_01993 3.1e-47 ylxQ J ribosomal protein
LNIPHOMF_01994 3.4e-32 ylxR K nucleic-acid-binding protein implicated in transcription termination
LNIPHOMF_01995 1.1e-203 nusA K Participates in both transcription termination and antitermination
LNIPHOMF_01996 3.3e-80 rimP S Required for maturation of 30S ribosomal subunits
LNIPHOMF_01997 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LNIPHOMF_01998 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
LNIPHOMF_01999 7.7e-233 rasP M zinc metalloprotease
LNIPHOMF_02000 4.6e-216 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
LNIPHOMF_02001 1.2e-138 cdsA 2.7.7.41 S Belongs to the CDS family
LNIPHOMF_02002 8.3e-145 uppS 2.5.1.31 I Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LNIPHOMF_02003 6.4e-91 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
LNIPHOMF_02004 2.7e-126 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
LNIPHOMF_02005 6.3e-157 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LNIPHOMF_02006 1e-131 rpsB J Belongs to the universal ribosomal protein uS2 family
LNIPHOMF_02007 4.3e-78 ylxL
LNIPHOMF_02008 5.6e-138 sigD K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LNIPHOMF_02009 1.1e-86 cheD 3.5.1.44 NT Deamidates glutamine residues to glutamate on methyl- accepting chemotaxis receptors (MCPs). CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the CheA kinase
LNIPHOMF_02010 2.6e-88 cdoA 1.13.11.20 S Cysteine dioxygenase type I
LNIPHOMF_02012 1.2e-133 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
LNIPHOMF_02013 6.3e-197 yubA S transporter activity
LNIPHOMF_02014 3.3e-183 ygjR S Oxidoreductase
LNIPHOMF_02015 1.4e-253 rhaA 2.7.1.5, 5.3.1.14 G Belongs to the rhamnose isomerase family
LNIPHOMF_02016 2.5e-55 rhaM 5.1.3.32 G Involved in the anomeric conversion of L-rhamnose
LNIPHOMF_02017 1.3e-281 rhaB 2.7.1.12, 2.7.1.17, 2.7.1.5, 5.3.1.14 G Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate
LNIPHOMF_02018 1e-134 fucR K COG1349 Transcriptional regulators of sugar metabolism
LNIPHOMF_02019 0.0 rhaD 1.1.1.1, 4.1.2.19 IQ Class II Aldolase and Adducin N-terminal domain
LNIPHOMF_02020 5.1e-239 mcpA NT chemotaxis protein
LNIPHOMF_02021 2.2e-295 mcpA NT chemotaxis protein
LNIPHOMF_02022 1.5e-222 mcpA NT chemotaxis protein
LNIPHOMF_02023 3.2e-225 mcpA NT chemotaxis protein
LNIPHOMF_02024 2.6e-140 tgl 2.3.2.13 S protein-glutamine gamma-glutamyltransferase activity
LNIPHOMF_02025 1e-35
LNIPHOMF_02026 2.1e-72 yugU S Uncharacterised protein family UPF0047
LNIPHOMF_02027 0.0 yugT 3.2.1.10, 3.2.1.20 GH13,GH31 G COG0366 Glycosidases
LNIPHOMF_02028 2.6e-236 yugS S COG1253 Hemolysins and related proteins containing CBS domains
LNIPHOMF_02029 1.4e-116 yugP S Zn-dependent protease
LNIPHOMF_02030 4.6e-39
LNIPHOMF_02031 1.1e-53 mstX S Membrane-integrating protein Mistic
LNIPHOMF_02032 1.7e-182 yugO P COG1226 Kef-type K transport systems
LNIPHOMF_02033 1.3e-72 yugN S YugN-like family
LNIPHOMF_02035 4.2e-261 pgi 5.3.1.9 G Belongs to the GPI family
LNIPHOMF_02036 2.8e-229 yugK C Dehydrogenase
LNIPHOMF_02037 8.9e-228 yugJ C oxidoreductases, Fe-dependent alcohol dehydrogenase family
LNIPHOMF_02038 1.1e-34 yuzA S Domain of unknown function (DUF378)
LNIPHOMF_02039 8.9e-63 yugI 5.3.1.9 J RNA binding protein (contains ribosomal protein S1 domain)
LNIPHOMF_02040 4.3e-200 yugH 2.6.1.1 E Aminotransferase
LNIPHOMF_02041 1.6e-85 alaR K Transcriptional regulator
LNIPHOMF_02042 1e-156 yugF I Hydrolase
LNIPHOMF_02043 9.8e-42 yugE S Domain of unknown function (DUF1871)
LNIPHOMF_02044 1.8e-228 patB 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
LNIPHOMF_02045 4.6e-233 T PhoQ Sensor
LNIPHOMF_02046 2e-70 kapB G Kinase associated protein B
LNIPHOMF_02047 1.9e-115 kapD L the KinA pathway to sporulation
LNIPHOMF_02049 3.5e-186 yuxJ EGP Major facilitator Superfamily
LNIPHOMF_02050 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Penicillin-binding Protein
LNIPHOMF_02051 6.3e-75 yuxK S protein conserved in bacteria
LNIPHOMF_02052 6.3e-78 yufK S Family of unknown function (DUF5366)
LNIPHOMF_02053 9.9e-294 dcuS 2.7.13.3 T Signal transduction histidine kinase regulating citrate malate metabolism
LNIPHOMF_02054 2.3e-125 dcuR T COG4565 Response regulator of citrate malate metabolism
LNIPHOMF_02055 3.4e-197 tcsA S ABC-type transport system, periplasmic component surface lipoprotein
LNIPHOMF_02056 1.1e-273 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
LNIPHOMF_02057 6.5e-185 yufP S Belongs to the binding-protein-dependent transport system permease family
LNIPHOMF_02058 4.5e-169 yufQ S Belongs to the binding-protein-dependent transport system permease family
LNIPHOMF_02059 1.3e-233 maeN C COG3493 Na citrate symporter
LNIPHOMF_02060 1.9e-14
LNIPHOMF_02061 0.0 phaA 1.6.5.3 CP COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit
LNIPHOMF_02062 5.4e-69 mrpB P Subunit B of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
LNIPHOMF_02063 1.5e-50 phaC 1.6.5.3 P Subunit C of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
LNIPHOMF_02064 3.8e-263 mrpD CP Subunit D of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
LNIPHOMF_02065 4.8e-79 mrpE P Subunit E of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
LNIPHOMF_02066 7.2e-38 phaF P Subunit F of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
LNIPHOMF_02067 5.2e-60 phaG P COG1320 Multisubunit Na H antiporter, MnhG subunit
LNIPHOMF_02068 9.2e-65 ydiI Q protein, possibly involved in aromatic compounds catabolism
LNIPHOMF_02069 5.1e-116 comA K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
LNIPHOMF_02070 8.2e-221 comP 2.7.13.3 T Histidine kinase
LNIPHOMF_02071 4.1e-77 comP 2.7.13.3 T Histidine kinase
LNIPHOMF_02072 2.2e-187 yxbC 1.14.11.47 S A domain family that is part of the cupin metalloenzyme superfamily.
LNIPHOMF_02073 1.6e-85 yxbD 3.2.2.20 K Acetyltransferase (GNAT) domain
LNIPHOMF_02074 1.4e-248 alkH 1.2.1.3 C Belongs to the aldehyde dehydrogenase family
LNIPHOMF_02075 2.2e-215 yxbF K Bacterial regulatory proteins, tetR family
LNIPHOMF_02076 5.7e-152 IQ Enoyl-(Acyl carrier protein) reductase
LNIPHOMF_02078 0.0 htpG O Molecular chaperone. Has ATPase activity
LNIPHOMF_02079 2.3e-246 csbC EGP Major facilitator Superfamily
LNIPHOMF_02080 8.3e-48 yxcD S Protein of unknown function (DUF2653)
LNIPHOMF_02082 3.7e-176 iolS C Aldo keto reductase
LNIPHOMF_02083 3.3e-138 iolR K COG1349 Transcriptional regulators of sugar metabolism
LNIPHOMF_02084 1.4e-281 iolA 1.2.1.18, 1.2.1.27 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
LNIPHOMF_02085 1.1e-155 iolB 5.3.1.30 G Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate)
LNIPHOMF_02086 2.9e-179 iolC 2.7.1.92 G Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP)
LNIPHOMF_02087 0.0 iolD 3.7.1.22 E Involved in the cleavage of the C1-C2 bond of 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy- glucuronate (5DG)
LNIPHOMF_02088 2.1e-176 iolE 4.2.1.44 G Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6 3,5-pentahydroxycyclohexanone) to 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol)
LNIPHOMF_02089 1.3e-235 iolF EGP Major facilitator Superfamily
LNIPHOMF_02090 2.8e-196 iolG 1.1.1.18, 1.1.1.369 S Involved in the oxidation of myo-inositol (MI) and D- chiro-inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D-chiro-inositol (1KDCI), respectively
LNIPHOMF_02091 2.3e-167 iolH G Xylose isomerase-like TIM barrel
LNIPHOMF_02092 1.9e-139 iolI 5.3.99.11 G Involved in the reversible interconverion of 2-keto-myo- inositol (2KMI, inosose or 2,4,6 3,5-pentahydroxycyclohexanone) to 1-keto-D-chiro-inositol (1KDCI or 2,3,5 4,6- pentahydroxycyclohexanone)
LNIPHOMF_02093 5.4e-161 iolJ 4.1.2.13, 4.1.2.29 F Produces dihydroxyacetone phosphate (DHAP or glycerone phosphate) and malonic semialdehyde (MSA or 3-oxopropanoate) from 6-phospho-5-dehydro-2-deoxy-D-gluconate (DKGP)
LNIPHOMF_02094 4.2e-124 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LNIPHOMF_02095 1.3e-182 T PhoQ Sensor
LNIPHOMF_02096 9.4e-141 yxdL V ABC transporter, ATP-binding protein
LNIPHOMF_02097 0.0 yxdM V ABC transporter (permease)
LNIPHOMF_02098 1.5e-58 yxeA S Protein of unknown function (DUF1093)
LNIPHOMF_02099 6e-177 fhuD P ABC transporter
LNIPHOMF_02100 8.5e-69
LNIPHOMF_02101 1.9e-16 yxeD
LNIPHOMF_02102 1.3e-20 yxeE
LNIPHOMF_02105 6.2e-151 yidA S hydrolases of the HAD superfamily
LNIPHOMF_02106 8.8e-192 yxeI 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
LNIPHOMF_02108 2.2e-254 yxeK C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LNIPHOMF_02109 7.3e-94 yxeL K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LNIPHOMF_02110 2.5e-144 yxeM M Belongs to the bacterial solute-binding protein 3 family
LNIPHOMF_02111 5.4e-108 yxeN P COG0765 ABC-type amino acid transport system, permease component
LNIPHOMF_02112 5.4e-133 yxeO 3.6.3.21 P ABC transporter, ATP-binding protein
LNIPHOMF_02113 3.8e-215 yxeP 3.5.1.47 E hydrolase activity
LNIPHOMF_02114 2e-255 yxeQ S MmgE/PrpD family
LNIPHOMF_02115 6.8e-201 eutH E Ethanolamine utilisation protein, EutH
LNIPHOMF_02116 3e-153 yxxB S Domain of Unknown Function (DUF1206)
LNIPHOMF_02117 3.5e-174 deoR K COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
LNIPHOMF_02118 7e-116 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
LNIPHOMF_02119 9.8e-206 nupC F Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LNIPHOMF_02120 4.2e-234 pdp 2.4.2.2, 2.4.2.4 F phosphorylase
LNIPHOMF_02121 1.8e-251 lysP E amino acid
LNIPHOMF_02122 8e-182 hutG 3.5.3.11, 3.5.3.8 E Catalyzes the conversion of N-formimidoyl-L-glutamate to L-glutamate and formamide
LNIPHOMF_02123 1.2e-238 hutI 3.5.2.7 Q Imidazolone-5-propionate hydrolase
LNIPHOMF_02124 0.0 hutU 4.2.1.49 E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
LNIPHOMF_02125 2.3e-284 hutH 4.3.1.3 E Histidine ammonia-lyase
LNIPHOMF_02126 5e-78 hutP K Antiterminator that binds to cis-acting regulatory sequences on the mRNA in the presence of histidine, thereby suppressing transcription termination and activating the hut operon for histidine utilization
LNIPHOMF_02127 6.3e-284 yxiA 3.2.1.99 GH43 G Belongs to the glycosyl hydrolase 43 family
LNIPHOMF_02128 2.1e-21 S Domain of unknown function (DUF5082)
LNIPHOMF_02129 3.6e-39 yxiC S Family of unknown function (DUF5344)
LNIPHOMF_02130 0.0 S nuclease activity
LNIPHOMF_02131 7.9e-114 yhzB S B3/4 domain
LNIPHOMF_02132 2.1e-224 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LNIPHOMF_02133 4.4e-177 yhbB S Putative amidase domain
LNIPHOMF_02134 8.2e-87 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
LNIPHOMF_02135 1.2e-109 yhbD K Protein of unknown function (DUF4004)
LNIPHOMF_02136 1.6e-65 yhbE M COG1664 Integral membrane protein CcmA involved in cell shape determination
LNIPHOMF_02137 8.2e-75 yhbF M COG1664 Integral membrane protein CcmA involved in cell shape determination
LNIPHOMF_02138 0.0 prkA T Ser protein kinase
LNIPHOMF_02139 2.5e-225 yhbH S Belongs to the UPF0229 family
LNIPHOMF_02140 2.2e-76 yhbI K DNA-binding transcription factor activity
LNIPHOMF_02141 3.1e-97 yhbJ V COG1566 Multidrug resistance efflux pump
LNIPHOMF_02142 3.1e-271 yhcA EGP Major facilitator Superfamily
LNIPHOMF_02143 1e-98 yhcB 1.6.5.2 S Belongs to the WrbA family
LNIPHOMF_02144 2.8e-37 yhcC
LNIPHOMF_02145 7.8e-55
LNIPHOMF_02146 6.6e-60 yhcF K Transcriptional regulator
LNIPHOMF_02147 1.6e-123 yhcG V ABC transporter, ATP-binding protein
LNIPHOMF_02148 2.6e-166 yhcH V ABC transporter, ATP-binding protein
LNIPHOMF_02149 3.9e-165 yhcI S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
LNIPHOMF_02150 1e-30 cspB K Cold-shock protein
LNIPHOMF_02151 5.2e-153 metQ M Belongs to the nlpA lipoprotein family
LNIPHOMF_02152 1.2e-197 yhcK 2.7.7.65 T COG2199 FOG GGDEF domain
LNIPHOMF_02153 6.3e-220 ydjN U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
LNIPHOMF_02154 3.7e-44 yhcM
LNIPHOMF_02155 2.1e-68 yhcN S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
LNIPHOMF_02156 2.5e-167 yhcP
LNIPHOMF_02157 5.2e-100 yhcQ M Spore coat protein
LNIPHOMF_02158 0.0 yhcR 3.1.3.5, 3.1.31.1 F Belongs to the 5'-nucleotidase family
LNIPHOMF_02159 7.6e-106 yhcS 3.4.22.70 M COG3764 Sortase (surface protein transpeptidase)
LNIPHOMF_02160 7.9e-171 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LNIPHOMF_02161 9.3e-68 yhcU S Family of unknown function (DUF5365)
LNIPHOMF_02162 9.9e-68 yhcV S COG0517 FOG CBS domain
LNIPHOMF_02163 4.6e-120 yhcW 5.4.2.6 S hydrolase
LNIPHOMF_02164 2.7e-304 yhcX 3.5.1.3 K Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
LNIPHOMF_02165 1.1e-261 yhxA E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LNIPHOMF_02166 5.2e-104 glpP K Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
LNIPHOMF_02167 1.9e-152 glpF G Belongs to the MIP aquaporin (TC 1.A.8) family
LNIPHOMF_02168 4.6e-293 glpK 2.7.1.30 C Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LNIPHOMF_02169 0.0 glpD 1.1.5.3 C Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LNIPHOMF_02170 0.0 pmmB 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
LNIPHOMF_02171 5.5e-214 yhcY 2.7.13.3 T Histidine kinase
LNIPHOMF_02172 1.1e-113 yhcZ K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
LNIPHOMF_02173 1.4e-84 azr 1.7.1.6 S NADPH-dependent FMN reductase
LNIPHOMF_02174 1.2e-38 yhdB S YhdB-like protein
LNIPHOMF_02175 4.8e-54 yhdC S Protein of unknown function (DUF3889)
LNIPHOMF_02176 7.9e-189 cwlS 3.5.1.28 CBM50 M COG1388 FOG LysM repeat
LNIPHOMF_02177 3.5e-76 nsrR K Transcriptional regulator
LNIPHOMF_02178 8.7e-239 ygxB M Conserved TM helix
LNIPHOMF_02179 2.1e-276 ycgB S Stage V sporulation protein R
LNIPHOMF_02180 5.8e-258 phoB 3.1.3.1 P Belongs to the alkaline phosphatase family
LNIPHOMF_02181 2.3e-78 spoVAC S stage V sporulation protein AC
LNIPHOMF_02182 1e-67 spoVAB S Stage V sporulation protein AB
LNIPHOMF_02183 7.4e-112 spoVAA S Stage V sporulation protein AA
LNIPHOMF_02184 2.4e-136 sigF K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LNIPHOMF_02185 1.8e-75 spoIIAB 2.7.11.1 F Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti-anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition
LNIPHOMF_02186 3.9e-57 spoIIAA T Belongs to the anti-sigma-factor antagonist family
LNIPHOMF_02187 2.8e-213 dacF 3.4.16.4 M Belongs to the peptidase S11 family
LNIPHOMF_02188 1.7e-148 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
LNIPHOMF_02189 1.2e-232 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
LNIPHOMF_02190 2.6e-166 xerD L recombinase XerD
LNIPHOMF_02191 3.7e-37 S Protein of unknown function (DUF4227)
LNIPHOMF_02192 2.4e-80 fur P Belongs to the Fur family
LNIPHOMF_02193 2.3e-108 spoIIM S Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane
LNIPHOMF_02194 2e-32 yqkK
LNIPHOMF_02195 5.5e-242 mleA 1.1.1.38 C malic enzyme
LNIPHOMF_02196 3.1e-235 mleN C Na H antiporter
LNIPHOMF_02197 2.9e-268 aspA 4.2.1.2, 4.3.1.1 E Aspartate ammonia-lyase
LNIPHOMF_02198 3.6e-185 ansA 3.5.1.1 EJ L-asparaginase
LNIPHOMF_02199 4.5e-58 ansR K Transcriptional regulator
LNIPHOMF_02200 3e-223 yqxK 3.6.4.12 L DNA helicase
LNIPHOMF_02201 1.2e-92 nudF 3.6.1.13 L Belongs to the Nudix hydrolase family
LNIPHOMF_02203 4.4e-169 yqkF C oxidoreductases (related to aryl-alcohol dehydrogenases)
LNIPHOMF_02204 4e-14 yqkE S Protein of unknown function (DUF3886)
LNIPHOMF_02205 2.4e-175 yqkD S COG1073 Hydrolases of the alpha beta superfamily
LNIPHOMF_02206 9.4e-39 yqkC S Protein of unknown function (DUF2552)
LNIPHOMF_02207 2.8e-54 yqkB S Belongs to the HesB IscA family
LNIPHOMF_02208 4.7e-196 yqkA K GrpB protein
LNIPHOMF_02209 8e-60 yqjZ 2.3.1.128, 2.5.1.18 S enzyme involved in biosynthesis of extracellular polysaccharides
LNIPHOMF_02210 3.6e-87 yqjY K acetyltransferase
LNIPHOMF_02211 2.2e-49 S YolD-like protein
LNIPHOMF_02212 3.1e-239 polYB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LNIPHOMF_02214 5.2e-226 yqjV G Major Facilitator Superfamily
LNIPHOMF_02216 7.2e-73 yqjT 3.1.26.4 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LNIPHOMF_02217 2.4e-178 coaA 2.7.1.33 F Pantothenic acid kinase
LNIPHOMF_02218 2.4e-264 dsdA 4.3.1.18 E Belongs to the serine threonine dehydratase family. DsdA subfamily
LNIPHOMF_02219 3.5e-143 yqjQ S Belongs to the short-chain dehydrogenases reductases (SDR) family
LNIPHOMF_02220 3.4e-180 yqjP S COG0491 Zn-dependent hydrolases, including glyoxylases
LNIPHOMF_02221 8.6e-148 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LNIPHOMF_02222 0.0 rocB E arginine degradation protein
LNIPHOMF_02223 1.4e-192 namA 1.6.99.1 C Catalyzes the reduction of the double bond of an array of alpha,beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes
LNIPHOMF_02224 9.6e-146 yqjL S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
LNIPHOMF_02225 2.9e-173 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
LNIPHOMF_02226 1.6e-290 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LNIPHOMF_02227 6.9e-267 gnd 1.1.1.343, 1.1.1.44 G Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LNIPHOMF_02228 7.3e-236 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LNIPHOMF_02229 4.5e-24 yqzJ
LNIPHOMF_02230 5.7e-144 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LNIPHOMF_02231 3.6e-142 yqjF S Uncharacterized conserved protein (COG2071)
LNIPHOMF_02232 1.6e-202 yqjE 3.4.11.4 E COG2195 Di- and tripeptidases
LNIPHOMF_02233 4.4e-291 mmdA 2.1.3.15, 6.4.1.3 I COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
LNIPHOMF_02234 2.2e-75 mce 4.4.1.5, 5.1.99.1, 5.4.99.2 E COG0346 Lactoylglutathione lyase and related lyases
LNIPHOMF_02236 1.4e-98 yqjB S protein conserved in bacteria
LNIPHOMF_02237 1.1e-175 yqjA S Putative aromatic acid exporter C-terminal domain
LNIPHOMF_02238 2e-129 artM 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
LNIPHOMF_02239 6.2e-109 artQ E COG0765 ABC-type amino acid transport system, permease component
LNIPHOMF_02240 1.4e-81 artP ET Belongs to the bacterial solute-binding protein 3 family
LNIPHOMF_02241 3.1e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LNIPHOMF_02242 4.2e-13 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
LNIPHOMF_02243 1.1e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LNIPHOMF_02244 3.7e-142 map 3.4.11.18 E Methionine aminopeptidase
LNIPHOMF_02245 5.7e-123 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
LNIPHOMF_02246 4.2e-234 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
LNIPHOMF_02247 1.8e-72 rplO J binds to the 23S rRNA
LNIPHOMF_02248 1.9e-23 rpmD J Ribosomal protein L30
LNIPHOMF_02249 3.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LNIPHOMF_02250 4e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LNIPHOMF_02251 1.3e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LNIPHOMF_02252 3.9e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LNIPHOMF_02253 3.4e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LNIPHOMF_02254 4.6e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LNIPHOMF_02255 6.2e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LNIPHOMF_02256 3.9e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LNIPHOMF_02257 3.5e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LNIPHOMF_02258 1.7e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
LNIPHOMF_02259 1.3e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LNIPHOMF_02260 6.2e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LNIPHOMF_02261 4.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LNIPHOMF_02262 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LNIPHOMF_02263 1.5e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LNIPHOMF_02264 1.2e-43 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
LNIPHOMF_02265 3e-105 rplD J Forms part of the polypeptide exit tunnel
LNIPHOMF_02266 6.3e-111 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LNIPHOMF_02267 7.5e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
LNIPHOMF_02268 9.1e-186 ybaC 3.4.11.5 S Alpha/beta hydrolase family
LNIPHOMF_02269 2.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LNIPHOMF_02270 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LNIPHOMF_02271 6e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
LNIPHOMF_02272 8.5e-72 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LNIPHOMF_02273 8e-33 ybxF J Belongs to the eukaryotic ribosomal protein eL8 family
LNIPHOMF_02274 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LNIPHOMF_02275 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LNIPHOMF_02276 8.2e-108 rsmC 2.1.1.172 J Methyltransferase
LNIPHOMF_02277 1.3e-42 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
LNIPHOMF_02278 5.1e-79 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LNIPHOMF_02279 1.1e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
LNIPHOMF_02280 2.8e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LNIPHOMF_02281 5.2e-96 nusG K Participates in transcription elongation, termination and antitermination
LNIPHOMF_02282 1e-21 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
LNIPHOMF_02283 4.4e-115 sigH K Belongs to the sigma-70 factor family
LNIPHOMF_02284 1.2e-88 yacP S RNA-binding protein containing a PIN domain
LNIPHOMF_02285 1.2e-135 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LNIPHOMF_02286 1e-72 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
LNIPHOMF_02287 4.9e-273 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
LNIPHOMF_02288 7.2e-118 cysE 2.3.1.30 E Serine acetyltransferase
LNIPHOMF_02289 1.9e-280 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LNIPHOMF_02290 3.1e-86 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 I Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
LNIPHOMF_02291 3.8e-125 ispD 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
LNIPHOMF_02292 2.7e-197 yacL S COG4956 Integral membrane protein (PIN domain superfamily)
LNIPHOMF_02293 1.3e-196 disA 2.7.7.85 L Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
LNIPHOMF_02294 9.6e-256 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LNIPHOMF_02295 0.0 clpC O Belongs to the ClpA ClpB family
LNIPHOMF_02296 6.1e-202 mcsB 2.7.14.1, 2.7.3.2, 2.7.3.3 E Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity
LNIPHOMF_02297 4.7e-47 mcsA 2.7.14.1 S protein with conserved CXXC pairs
LNIPHOMF_02298 2.9e-76 ctsR K Belongs to the CtsR family
LNIPHOMF_02299 0.0 yjcE P COG0025 NhaP-type Na H and K H antiporters
LNIPHOMF_02300 0.0 cysI 1.7.7.1, 1.8.1.2, 1.8.7.1 P Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate
LNIPHOMF_02301 0.0 cysJ 1.8.1.2 P Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LNIPHOMF_02302 0.0 helD 3.6.4.12 L DNA helicase
LNIPHOMF_02303 4.1e-107 yvgT S membrane
LNIPHOMF_02304 2.2e-72 bdbC O Required for disulfide bond formation in some proteins
LNIPHOMF_02305 1.6e-104 bdbD O Thioredoxin
LNIPHOMF_02306 0.0 cadA 3.6.3.3, 3.6.3.5 P COG2217 Cation transport ATPase
LNIPHOMF_02307 0.0 copA 3.6.3.54 P P-type ATPase
LNIPHOMF_02308 1.5e-29 copZ P Copper resistance protein CopZ
LNIPHOMF_02309 2.2e-48 csoR S transcriptional
LNIPHOMF_02310 2.1e-199 yvaA 1.1.1.371 S Oxidoreductase
LNIPHOMF_02311 2.4e-118 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LNIPHOMF_02312 0.0 yvaC S Fusaric acid resistance protein-like
LNIPHOMF_02313 5.7e-73 yvaD S Family of unknown function (DUF5360)
LNIPHOMF_02314 2.8e-55 yvaE P Small Multidrug Resistance protein
LNIPHOMF_02315 4.1e-101 K Bacterial regulatory proteins, tetR family
LNIPHOMF_02316 9.1e-131 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
LNIPHOMF_02321 9.1e-131 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
LNIPHOMF_02322 4.1e-101 K Bacterial regulatory proteins, tetR family
LNIPHOMF_02323 2.8e-55 yvaE P Small Multidrug Resistance protein
LNIPHOMF_02324 5.7e-73 yvaD S Family of unknown function (DUF5360)
LNIPHOMF_02325 0.0 yvaC S Fusaric acid resistance protein-like
LNIPHOMF_02326 2.4e-118 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
LNIPHOMF_02327 2.1e-199 yvaA 1.1.1.371 S Oxidoreductase
LNIPHOMF_02328 2.2e-48 csoR S transcriptional
LNIPHOMF_02329 1.5e-29 copZ P Copper resistance protein CopZ
LNIPHOMF_02330 0.0 copA 3.6.3.54 P P-type ATPase
LNIPHOMF_02331 0.0 cadA 3.6.3.3, 3.6.3.5 P COG2217 Cation transport ATPase
LNIPHOMF_02332 1.6e-104 bdbD O Thioredoxin
LNIPHOMF_02333 2.2e-72 bdbC O Required for disulfide bond formation in some proteins
LNIPHOMF_02334 4.1e-107 yvgT S membrane
LNIPHOMF_02335 0.0 helD 3.6.4.12 L DNA helicase
LNIPHOMF_02336 0.0 cysJ 1.8.1.2 P Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LNIPHOMF_02337 0.0 cysI 1.7.7.1, 1.8.1.2, 1.8.7.1 P Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate
LNIPHOMF_02338 0.0 yjcE P COG0025 NhaP-type Na H and K H antiporters
LNIPHOMF_02339 6.8e-44 G COG4209 ABC-type polysaccharide transport system, permease component
LNIPHOMF_02340 4.7e-226 yteR 3.2.1.172 GH105 G unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
LNIPHOMF_02341 4.6e-73 yteS G transport
LNIPHOMF_02342 9.2e-258 yteT S Oxidoreductase family, C-terminal alpha/beta domain
LNIPHOMF_02343 4.8e-117 yteU S Integral membrane protein
LNIPHOMF_02344 3.1e-26 yteV S Sporulation protein Cse60
LNIPHOMF_02345 3.4e-283 opuD M Belongs to the BCCT transporter (TC 2.A.15) family
LNIPHOMF_02346 8.2e-232 ytfP S HI0933-like protein
LNIPHOMF_02347 1.3e-293 ytgP S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
LNIPHOMF_02348 2.6e-132 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
LNIPHOMF_02349 2.4e-33 ytzE K COG1349 Transcriptional regulators of sugar metabolism
LNIPHOMF_02350 4.3e-132 ythP V ABC transporter
LNIPHOMF_02351 3.9e-207 ythQ U Bacterial ABC transporter protein EcsB
LNIPHOMF_02352 7.2e-226 pbuO S permease
LNIPHOMF_02353 7.1e-272 pepV 3.5.1.18 E Dipeptidase
LNIPHOMF_02354 8.6e-173 ytkP 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
LNIPHOMF_02355 4.3e-103 ligT 3.1.4.58, 3.5.1.42 J Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
LNIPHOMF_02356 1.3e-165 ytlQ
LNIPHOMF_02357 2.9e-181 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
LNIPHOMF_02358 0.0 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
LNIPHOMF_02359 6.1e-151 ytmP 2.7.1.89 M Phosphotransferase
LNIPHOMF_02360 2e-45 ytzH S YtzH-like protein
LNIPHOMF_02361 1.4e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
LNIPHOMF_02362 6.4e-151 ytnP S COG0491 Zn-dependent hydrolases, including glyoxylases
LNIPHOMF_02363 0.0 sfcA 1.1.1.38 C Malate dehydrogenase
LNIPHOMF_02364 9.8e-52 ytzB S small secreted protein
LNIPHOMF_02365 4.7e-207 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
LNIPHOMF_02366 5.9e-79 ytoQ S Nucleoside 2-deoxyribosyltransferase YtoQ
LNIPHOMF_02367 2.1e-57 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
LNIPHOMF_02368 9.8e-149 ytpQ S Belongs to the UPF0354 family
LNIPHOMF_02369 9.7e-109 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LNIPHOMF_02370 0.0 sftA D Belongs to the FtsK SpoIIIE SftA family
LNIPHOMF_02371 1.6e-254 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
LNIPHOMF_02372 2.1e-17 ytxG S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
LNIPHOMF_02373 6.6e-17 ytxH S COG4980 Gas vesicle protein
LNIPHOMF_02374 4.4e-55 ytxJ O Protein of unknown function (DUF2847)
LNIPHOMF_02375 4.9e-196 aroF 2.5.1.54, 5.4.99.5 E Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate
LNIPHOMF_02376 1.7e-182 ccpA K catabolite control protein A
LNIPHOMF_02377 7.1e-147 motA N flagellar motor
LNIPHOMF_02378 1.4e-125 motS N Flagellar motor protein
LNIPHOMF_02379 1.9e-225 acuC BQ histone deacetylase
LNIPHOMF_02380 1.6e-117 acuB S Domain in cystathionine beta-synthase and other proteins.
LNIPHOMF_02381 3.6e-122 acuA K Part of the acuABC operon, which is possibly involved in the breakdown of acetoin and butanediol. Acts as an acetyltransferase inactivating acetyl-CoA synthetase AcsA via acetylation at a Lys residue
LNIPHOMF_02382 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
LNIPHOMF_02383 5.2e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
LNIPHOMF_02385 3.9e-263 lytH 3.5.1.28 M COG3103 SH3 domain protein
LNIPHOMF_02386 1.9e-68 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
LNIPHOMF_02387 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LNIPHOMF_02388 5.9e-91 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LNIPHOMF_02389 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
LNIPHOMF_02390 1.3e-48 yrvD S Lipopolysaccharide assembly protein A domain
LNIPHOMF_02391 1.7e-87 yrvC P regulatory, ligand-binding protein related to C-terminal domains of K channels
LNIPHOMF_02392 0.0 secF U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LNIPHOMF_02393 9.4e-49 yrzD S Post-transcriptional regulator
LNIPHOMF_02394 5.7e-270 spoVB S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
LNIPHOMF_02395 2.2e-114 yrbG S membrane
LNIPHOMF_02396 1.2e-74 yrzE S Protein of unknown function (DUF3792)
LNIPHOMF_02397 1.1e-38 yajC U Preprotein translocase subunit YajC
LNIPHOMF_02398 5.2e-228 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
LNIPHOMF_02399 2e-194 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
LNIPHOMF_02400 2.6e-18 yrzS S Protein of unknown function (DUF2905)
LNIPHOMF_02401 6.6e-187 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
LNIPHOMF_02402 1.6e-106 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
LNIPHOMF_02403 4.8e-93 bofC S BofC C-terminal domain
LNIPHOMF_02404 5.3e-253 csbX EGP Major facilitator Superfamily
LNIPHOMF_02405 1.3e-193 iolG 1.1.1.18, 1.1.1.369 S Oxidoreductase family, NAD-binding Rossmann fold
LNIPHOMF_02406 6.5e-119 yrzF T serine threonine protein kinase
LNIPHOMF_02408 2.6e-35 S Family of unknown function (DUF5412)
LNIPHOMF_02409 1.8e-262 alsT E Sodium alanine symporter
LNIPHOMF_02410 1.9e-127 yebC K transcriptional regulatory protein
LNIPHOMF_02411 3.8e-49 S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
LNIPHOMF_02412 9.8e-158 safA M spore coat assembly protein SafA
LNIPHOMF_02413 2.8e-215 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
LNIPHOMF_02414 5.4e-161 nadC 1.4.3.16, 2.4.2.19 H Belongs to the NadC ModD family
LNIPHOMF_02415 2.7e-307 nadB 1.3.5.4, 1.4.3.16 H Catalyzes the oxidation of L-aspartate to iminoaspartate
LNIPHOMF_02416 1.2e-230 nifS 2.8.1.7 E Cysteine desulfurase
LNIPHOMF_02417 3.6e-94 niaR S small molecule binding protein (contains 3H domain)
LNIPHOMF_02418 3.4e-163 pheA 4.2.1.51 E Prephenate dehydratase
LNIPHOMF_02419 2.2e-73 pheB 5.4.99.5 S Belongs to the UPF0735 family
LNIPHOMF_02420 1.5e-231 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LNIPHOMF_02421 1.5e-106 spo0B T Sporulation initiation phospho-transferase B, C-terminal
LNIPHOMF_02422 2.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
LNIPHOMF_02423 4.1e-56 ysxB J ribosomal protein
LNIPHOMF_02424 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
LNIPHOMF_02425 4.3e-275 dacC 3.4.16.4 M D-alanyl-D-alanine carboxypeptidase
LNIPHOMF_02426 6e-193 yoxA 5.1.3.3 G Aldose 1-epimerase
LNIPHOMF_02427 2.3e-246 yoeA V MATE efflux family protein
LNIPHOMF_02428 1.1e-98 yoeB S IseA DL-endopeptidase inhibitor
LNIPHOMF_02430 2.2e-96 L Integrase
LNIPHOMF_02431 3e-34 yoeD G Helix-turn-helix domain
LNIPHOMF_02432 0.0 ggt 2.3.2.2, 3.4.19.13 E gamma-glutamyltransferase
LNIPHOMF_02433 2.5e-158 gltR1 K Transcriptional regulator
LNIPHOMF_02434 5e-187 yogA C COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases
LNIPHOMF_02435 2.7e-293 gltD 1.4.1.13, 1.4.1.14 E COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases
LNIPHOMF_02436 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase
LNIPHOMF_02437 7.8e-155 gltC K Transcriptional regulator
LNIPHOMF_02438 4.1e-206 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LNIPHOMF_02439 2.5e-144 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LNIPHOMF_02440 1.9e-59 rtp K Plays a role in DNA replication and termination (fork arrest mechanism). Two dimers of rtp bind to the two inverted repeat regions (IRI and IRII) present in the termination site. The binding of each dimer is centered on an 8 bp direct repeat
LNIPHOMF_02441 2.2e-123 fabG 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
LNIPHOMF_02442 3e-42 yoxC S Bacterial protein of unknown function (DUF948)
LNIPHOMF_02443 3.1e-144 yoxB
LNIPHOMF_02444 7.5e-97 yoaA 2.3.1.128 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
LNIPHOMF_02445 6.2e-235 yoaB EGP Major facilitator Superfamily
LNIPHOMF_02446 1e-284 yoaC 2.7.1.12, 2.7.1.17, 2.7.1.189, 2.7.1.5 G FGGY family of carbohydrate kinases, C-terminal domain
LNIPHOMF_02447 1.7e-190 yoaD 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LNIPHOMF_02448 0.0 yoaE C belongs to the prokaryotic molybdopterin-containing oxidoreductase family
LNIPHOMF_02449 1.9e-33 yoaF
LNIPHOMF_02450 2.2e-08 ywlA S Uncharacterised protein family (UPF0715)
LNIPHOMF_02451 7e-14
LNIPHOMF_02452 1.5e-38 S Protein of unknown function (DUF4025)
LNIPHOMF_02453 1.7e-187 mcpU NT methyl-accepting chemotaxis protein
LNIPHOMF_02454 8.7e-281 hpaB 1.14.14.9 Q COG2368 Aromatic ring hydroxylase
LNIPHOMF_02455 3.8e-133 yoaJ G Endoglucanase C-terminal domain subunit and related proteins
LNIPHOMF_02456 2.3e-111 yoaK S Membrane
LNIPHOMF_02457 2.3e-198 pelB 4.2.2.10, 4.2.2.2 G Amb_all
LNIPHOMF_02458 1.1e-132 yoqW S Belongs to the SOS response-associated peptidase family
LNIPHOMF_02459 2.8e-79 cheW NT COG0835 Chemotaxis signal transduction protein
LNIPHOMF_02460 0.0 cheA 2.7.13.3 NT COG0643 Chemotaxis protein histidine kinase and related kinases
LNIPHOMF_02461 5.8e-197 cheB 3.1.1.61, 3.5.1.44 NT catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
LNIPHOMF_02462 7.5e-158 flhG D Belongs to the ParA family
LNIPHOMF_02463 5.2e-201 flhF N Flagellar biosynthesis regulator FlhF
LNIPHOMF_02464 0.0 flhA N Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LNIPHOMF_02465 1e-66 flhB N Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LNIPHOMF_02466 9.8e-113 flhB N Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LNIPHOMF_02467 3.6e-132 fliR N Flagellar biosynthetic protein FliR
LNIPHOMF_02468 2.2e-36 fliQ N Role in flagellar biosynthesis
LNIPHOMF_02469 1.6e-109 fliP N Plays a role in the flagellum-specific transport system
LNIPHOMF_02470 9.3e-97 fliZ N Flagellar biosynthesis protein, FliO
LNIPHOMF_02471 1.6e-58 cheB 3.1.1.61, 3.5.1.44 T response regulator
LNIPHOMF_02472 4.5e-184 fliN N FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LNIPHOMF_02473 1.9e-181 fliM N One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
LNIPHOMF_02474 4.6e-49 fliL N Controls the rotational direction of flagella during chemotaxis
LNIPHOMF_02475 8.2e-140 flgG N Flagellar basal body rod
LNIPHOMF_02476 1.7e-72 flgD N Flagellar basal body rod modification protein
LNIPHOMF_02477 1.2e-221 fliK N Flagellar hook-length control protein
LNIPHOMF_02478 7.7e-37 ylxF S MgtE intracellular N domain
LNIPHOMF_02479 1.5e-69 fliJ N Flagellar biosynthesis chaperone
LNIPHOMF_02480 2.5e-242 fliI 3.6.3.14 NU COG1157 Flagellar biosynthesis type III secretory pathway ATPase
LNIPHOMF_02481 2.5e-106 fliH NU COG1317 Flagellar biosynthesis type III secretory pathway protein
LNIPHOMF_02482 2e-178 fliG N One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
LNIPHOMF_02483 2.4e-255 fliF N The M ring may be actively involved in energy transduction
LNIPHOMF_02484 1.9e-31 fliE N Flagellar hook-basal body
LNIPHOMF_02485 6.9e-75 flgC N Belongs to the flagella basal body rod proteins family
LNIPHOMF_02486 2.3e-63 flgB N Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body
LNIPHOMF_02487 9.2e-136 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
LNIPHOMF_02488 1.5e-250 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
LNIPHOMF_02489 4.4e-92 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
LNIPHOMF_02490 2.5e-169 xerC L tyrosine recombinase XerC
LNIPHOMF_02491 7.4e-247 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
LNIPHOMF_02492 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LNIPHOMF_02493 1.7e-170 dprA LU Rossmann fold nucleotide-binding protein involved in DNA uptake
LNIPHOMF_02494 1.1e-167 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LNIPHOMF_02495 3.4e-211 sucC 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
LNIPHOMF_02496 3e-44 ylqH S homolog of the cytoplasmic domain of flagellar protein FhlB
LNIPHOMF_02497 8.5e-291 ylqG
LNIPHOMF_02498 4.1e-136 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LNIPHOMF_02499 4.2e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LNIPHOMF_02500 1.4e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
LNIPHOMF_02501 9.2e-138 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
LNIPHOMF_02502 5.3e-95 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LNIPHOMF_02503 1.3e-61 ylqD S YlqD protein
LNIPHOMF_02504 1.2e-36 ylqC S Belongs to the UPF0109 family
LNIPHOMF_02505 1.1e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
LNIPHOMF_02506 6e-236 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LNIPHOMF_02507 1.6e-49 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
LNIPHOMF_02508 2.9e-87
LNIPHOMF_02509 8.8e-176 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
LNIPHOMF_02510 0.0 smc D Required for chromosome condensation and partitioning
LNIPHOMF_02511 1.2e-135 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
LNIPHOMF_02512 2.8e-32 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
LNIPHOMF_02513 6.1e-129 IQ reductase
LNIPHOMF_02514 9.1e-170 fabD 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
LNIPHOMF_02515 4.3e-178 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
LNIPHOMF_02516 4e-80 fapR 5.3.1.23 K Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism
LNIPHOMF_02517 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LNIPHOMF_02518 9.3e-156 sdaAA 4.3.1.17 E L-serine dehydratase
LNIPHOMF_02519 1.9e-118 sdaAB 4.3.1.17 E L-serine dehydratase
LNIPHOMF_02520 2.7e-302 yloV S kinase related to dihydroxyacetone kinase
LNIPHOMF_02521 5.5e-59 asp S protein conserved in bacteria
LNIPHOMF_02522 4.2e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
LNIPHOMF_02523 3.1e-121 thiN 2.7.6.2 H thiamine pyrophosphokinase
LNIPHOMF_02524 4.2e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
LNIPHOMF_02525 8.6e-170 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
LNIPHOMF_02526 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
LNIPHOMF_02527 2.4e-141 stp 3.1.3.16 T phosphatase
LNIPHOMF_02528 4.8e-207 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
LNIPHOMF_02529 2.9e-254 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LNIPHOMF_02530 3.8e-176 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LNIPHOMF_02531 6e-85 def 2.1.2.9, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LNIPHOMF_02532 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LNIPHOMF_02533 8.8e-226 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LNIPHOMF_02534 2.2e-28 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
LNIPHOMF_02535 3.1e-110 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
LNIPHOMF_02536 1.5e-40 ylzA S Belongs to the UPF0296 family
LNIPHOMF_02537 2.4e-156 yloC S stress-induced protein
LNIPHOMF_02538 0.0 yloB 3.6.3.8 P COG0474 Cation transport ATPase
LNIPHOMF_02539 0.0 FbpA K RNA-binding protein homologous to eukaryotic snRNP
LNIPHOMF_02540 4.3e-83 cysG 1.3.1.76, 4.99.1.4 H Siroheme synthase
LNIPHOMF_02541 2e-146 cbiX 4.99.1.3, 4.99.1.4, 5.4.99.60, 5.4.99.61 S Sirohydrochlorin ferrochelatase
LNIPHOMF_02542 2.2e-145 hemD 2.1.1.107, 4.2.1.75 H Belongs to the precorrin methyltransferase family
LNIPHOMF_02543 7.3e-109 cysC 2.7.1.25 P Catalyzes the synthesis of activated sulfate
LNIPHOMF_02544 1.3e-223 sat 2.7.7.4 P Belongs to the sulfate adenylyltransferase family
LNIPHOMF_02545 1.1e-179 cysP P phosphate transporter
LNIPHOMF_02546 3.5e-142 cysH 1.8.4.10, 1.8.4.8, 2.7.1.25 EH Belongs to the PAPS reductase family. CysH subfamily
LNIPHOMF_02548 2.9e-116 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LNIPHOMF_02549 8e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
LNIPHOMF_02550 2.9e-176 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
LNIPHOMF_02551 4.8e-145 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
LNIPHOMF_02552 0.0 carB 6.3.5.5 F Belongs to the CarB family
LNIPHOMF_02553 5e-212 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
LNIPHOMF_02554 1.7e-251 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
LNIPHOMF_02555 1.4e-167 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
LNIPHOMF_02556 9e-232 pyrP F Xanthine uracil
LNIPHOMF_02557 2.7e-94 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
LNIPHOMF_02558 1.1e-164 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LNIPHOMF_02559 1.8e-78 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LNIPHOMF_02560 1.3e-63 dksA T COG1734 DnaK suppressor protein
LNIPHOMF_02561 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LNIPHOMF_02562 2.6e-67 divIVA D Cell division initiation protein
LNIPHOMF_02563 6.7e-139 ylmH 5.4.99.23, 5.4.99.24 S conserved protein, contains S4-like domain
LNIPHOMF_02564 1.3e-39 yggT S membrane
LNIPHOMF_02565 1.4e-62 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
LNIPHOMF_02566 2.9e-125 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LNIPHOMF_02567 1.1e-158 yfiH S Belongs to the multicopper oxidase YfiH RL5 family
LNIPHOMF_02568 2.4e-37 ylmC S sporulation protein
LNIPHOMF_02569 1.3e-256 argE 3.5.1.16 E Acetylornithine deacetylase
LNIPHOMF_02570 1.1e-147 modF 3.6.3.21, 3.6.3.34 P COG1119 ABC-type molybdenum transport system, ATPase component photorepair protein PhrA
LNIPHOMF_02571 3.6e-140 sigG K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LNIPHOMF_02572 1.4e-125 sigE K sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LNIPHOMF_02573 4.4e-172 spoIIGA M aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR
LNIPHOMF_02574 0.0 bpr O COG1404 Subtilisin-like serine proteases
LNIPHOMF_02575 2e-203 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LNIPHOMF_02576 2.4e-229 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
LNIPHOMF_02577 6.2e-58 sbp S small basic protein
LNIPHOMF_02578 1e-102 ylxX S protein conserved in bacteria
LNIPHOMF_02579 2.4e-103 ylxW S protein conserved in bacteria
LNIPHOMF_02580 2.6e-138 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
LNIPHOMF_02581 5.3e-167 murB 1.3.1.98 M cell wall formation
LNIPHOMF_02582 2.3e-201 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LNIPHOMF_02583 5.7e-186 spoVE D Belongs to the SEDS family
LNIPHOMF_02584 2.6e-255 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LNIPHOMF_02585 3.2e-170 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LNIPHOMF_02586 5.2e-281 murE 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LNIPHOMF_02587 0.0 ftsI 3.4.16.4 M stage V sporulation protein D
LNIPHOMF_02588 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
LNIPHOMF_02589 3.7e-44 ftsL D Essential cell division protein
LNIPHOMF_02590 6.6e-173 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
LNIPHOMF_02591 2.9e-78 mraZ K Belongs to the MraZ family
LNIPHOMF_02592 2.9e-309 bshC S Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
LNIPHOMF_02593 7.3e-169 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LNIPHOMF_02594 1.6e-84 ydcK S Belongs to the SprT family
LNIPHOMF_02595 0.0 yhgF K COG2183 Transcriptional accessory protein
LNIPHOMF_02596 1.6e-76 ydcH K helix_turn_helix multiple antibiotic resistance protein
LNIPHOMF_02597 1.5e-82 ydcG S EVE domain
LNIPHOMF_02601 4.8e-108 rsbX 3.1.3.16, 3.1.3.3 KT Sigma factor PP2C-like phosphatases
LNIPHOMF_02602 3.4e-138 sigB K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LNIPHOMF_02603 2.4e-86 rsbW 2.7.11.1 F Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B)
LNIPHOMF_02604 7e-53 rsbV T Belongs to the anti-sigma-factor antagonist family
LNIPHOMF_02605 7.1e-189 rsbU 3.1.3.3 KT phosphatase
LNIPHOMF_02606 1.3e-69 rsbT 2.7.11.1 T COG2172 Anti-sigma regulatory factor (Ser Thr protein kinase)
LNIPHOMF_02607 5.2e-57 rsbS T antagonist
LNIPHOMF_02608 1.3e-143 rsbR T Positive regulator of sigma-B
LNIPHOMF_02609 2.5e-56 ndoA L Toxic component of a toxin-antitoxin (TA) module
LNIPHOMF_02610 4.8e-42 ndoAI K transcriptional regulators containing the CopG Arc MetJ DNA-binding domain and a metal-binding domain
LNIPHOMF_02611 2.3e-223 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LNIPHOMF_02612 2.9e-183 ydcC M COG2834 Outer membrane lipoprotein-sorting protein
LNIPHOMF_02613 2.5e-59 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
LNIPHOMF_02614 1.8e-107 ydcA 3.4.21.105 S membrane protein (homolog of Drosophila rhomboid)
LNIPHOMF_02615 2.2e-263 ydbT S Membrane
LNIPHOMF_02616 2.1e-82 ydbS S Bacterial PH domain
LNIPHOMF_02617 9e-249 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
LNIPHOMF_02618 1.9e-259 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
LNIPHOMF_02619 4.6e-202 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
LNIPHOMF_02620 2.3e-56 ydbP 2.7.1.180, 5.3.4.1 CO Thioredoxin
LNIPHOMF_02621 1.9e-150 yeaB P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LNIPHOMF_02622 2.2e-07 S Fur-regulated basic protein A
LNIPHOMF_02623 1.1e-18 S Fur-regulated basic protein B
LNIPHOMF_02624 3e-220 ydbM 1.3.8.1 I acyl-CoA dehydrogenase
LNIPHOMF_02625 2.7e-52 ydbL
LNIPHOMF_02626 5.5e-125 ydbK S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
LNIPHOMF_02627 3.6e-171 ydbJ V ABC transporter, ATP-binding protein
LNIPHOMF_02628 4.4e-181 ydbI S AI-2E family transporter
LNIPHOMF_02629 6.3e-227 dctA U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
LNIPHOMF_02630 8.1e-120 dctR T COG4565 Response regulator of citrate malate metabolism
LNIPHOMF_02631 2.5e-297 dctS 2.7.13.3 T Signal transduction histidine kinase regulating citrate malate metabolism
LNIPHOMF_02632 2.7e-199 dctB G COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component
LNIPHOMF_02633 3.2e-155 ydbD P Catalase
LNIPHOMF_02634 2.8e-63 ydbC S Domain of unknown function (DUF4937
LNIPHOMF_02635 8.9e-59 ydbB G Cupin domain
LNIPHOMF_02637 3.8e-148 ydbA 3.6.3.4, 3.6.3.54 P EcsC protein family
LNIPHOMF_02638 3.3e-77 ydaT S Uncharacterized protein conserved in bacteria (DUF2188)
LNIPHOMF_02640 1e-224 mntH P H( )-stimulated, divalent metal cation uptake system
LNIPHOMF_02641 9.4e-40
LNIPHOMF_02642 3.7e-251 xynC 3.2.1.136 GH5 M Belongs to the glycosyl hydrolase 30 family
LNIPHOMF_02643 4.4e-299 xynD3 3.2.1.55 CBM6,GH43 G Belongs to the glycosyl hydrolase 43 family
LNIPHOMF_02644 2.4e-80 yngA S membrane
LNIPHOMF_02645 4.1e-164 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
LNIPHOMF_02646 5.5e-104 yngC S membrane-associated protein
LNIPHOMF_02647 1.9e-233 nrnB S phosphohydrolase (DHH superfamily)
LNIPHOMF_02648 6.3e-290 yngE 2.1.3.15, 6.4.1.3 I COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
LNIPHOMF_02649 2.2e-137 yngF 4.2.1.17 I Belongs to the enoyl-CoA hydratase isomerase family
LNIPHOMF_02650 8e-168 mvaB 4.1.3.4, 6.4.1.4 E Hydroxymethylglutaryl-CoA lyase
LNIPHOMF_02651 6e-32 pycB 2.3.1.12, 6.4.1.1 I Biotin carboxyl carrier protein
LNIPHOMF_02652 3e-251 yngH 6.3.4.14, 6.4.1.2, 6.4.1.3, 6.4.1.4 I Biotin carboxylase
LNIPHOMF_02653 0.0 yngI IQ COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
LNIPHOMF_02654 4.4e-211 yngJ 1.3.8.1, 1.3.99.12 I acyl-CoA dehydrogenase
LNIPHOMF_02655 1.8e-31 S Family of unknown function (DUF5367)
LNIPHOMF_02656 1.3e-306 yngK T Glycosyl hydrolase-like 10
LNIPHOMF_02657 2.8e-64 yngL S Protein of unknown function (DUF1360)
LNIPHOMF_02658 0.0 6.3.2.14 Q amino acid activation for nonribosomal peptide biosynthetic process
LNIPHOMF_02659 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LNIPHOMF_02660 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LNIPHOMF_02661 5.1e-50 ybzH K Helix-turn-helix domain
LNIPHOMF_02662 4.7e-61 ybcI S Uncharacterized conserved protein (DUF2294)
LNIPHOMF_02663 3.9e-47
LNIPHOMF_02664 3.7e-96 can 4.2.1.1 P carbonic anhydrase
LNIPHOMF_02665 0.0 ybcC S Belongs to the UPF0753 family
LNIPHOMF_02666 1.5e-278 ndhF 1.6.5.3 CP COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit
LNIPHOMF_02667 5.1e-101 ogt 2.1.1.63, 3.2.2.21 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LNIPHOMF_02668 1.4e-121 adaA 3.2.2.21 K Transcriptional regulator
LNIPHOMF_02669 2.1e-176 alkA 3.2.2.21 L COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
LNIPHOMF_02670 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
LNIPHOMF_02671 9.3e-253 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LNIPHOMF_02672 3e-225 ybbR S protein conserved in bacteria
LNIPHOMF_02673 2.7e-146 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
LNIPHOMF_02674 1.7e-103 rsiW K Is the anti-sigma factor for SigW. The presence of RsiW leads to the inactivation of SigW, and its proteolytic destruction to sigma-W activation
LNIPHOMF_02675 8.5e-99 sigW K Belongs to the sigma-70 factor family. ECF subfamily
LNIPHOMF_02681 3.9e-78 ybbK 2.4.2.1, 6.3.2.4 S Protein of unknown function (DUF523)
LNIPHOMF_02682 6.4e-87 ybbJ J acetyltransferase
LNIPHOMF_02683 2.1e-163 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
LNIPHOMF_02684 1.1e-150 ybbH K transcriptional
LNIPHOMF_02685 9.8e-234 ybbF 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
LNIPHOMF_02686 4e-256 yfeW 3.4.16.4 V Belongs to the UPF0214 family
LNIPHOMF_02687 0.0 ybbD 3.2.1.52 G Belongs to the glycosyl hydrolase 3 family
LNIPHOMF_02688 4.4e-241 ybbC 3.2.1.52 S protein conserved in bacteria
LNIPHOMF_02689 5.4e-308 ybbB K COG2207 AraC-type DNA-binding domain-containing proteins
LNIPHOMF_02690 7.2e-167 feuA P Iron-uptake system-binding protein
LNIPHOMF_02691 1.1e-176 feuB P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNIPHOMF_02692 3e-179 feuC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNIPHOMF_02693 2.2e-142 ybbA S Putative esterase
LNIPHOMF_02694 1.2e-161 ybaS 1.1.1.58 S Na -dependent transporter
LNIPHOMF_02696 4.6e-250 ybaR P COG0659 Sulfate permease and related transporters (MFS superfamily)
LNIPHOMF_02697 1.3e-57 ynfC
LNIPHOMF_02698 2.3e-12
LNIPHOMF_02699 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LNIPHOMF_02700 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LNIPHOMF_02701 6.6e-69 yccU S CoA-binding protein
LNIPHOMF_02702 5e-94 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
LNIPHOMF_02703 4.1e-49 yneR S Belongs to the HesB IscA family
LNIPHOMF_02704 1.3e-53 yneQ
LNIPHOMF_02705 1.2e-73 yneP S Thioesterase-like superfamily
LNIPHOMF_02706 3.9e-35 tlp S Belongs to the Tlp family
LNIPHOMF_02707 3.1e-08 sspN S Small acid-soluble spore protein N family
LNIPHOMF_02709 4.1e-92 yneN CO alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LNIPHOMF_02710 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LNIPHOMF_02711 2.2e-14 sspO S Belongs to the SspO family
LNIPHOMF_02712 3.9e-19 sspP S Belongs to the SspP family
LNIPHOMF_02713 4.1e-65 hspX O Spore coat protein
LNIPHOMF_02714 4.2e-74 yneK S Protein of unknown function (DUF2621)
LNIPHOMF_02715 5.1e-76 yneJ O COG4846 Membrane protein involved in cytochrome C biogenesis
LNIPHOMF_02716 7.2e-59 cheB 3.1.1.61, 3.5.1.44 T cheY-homologous receiver domain
LNIPHOMF_02717 7.1e-127 ccdA O cytochrome c biogenesis protein
LNIPHOMF_02718 7.5e-14 ynzD S Spo0E like sporulation regulatory protein
LNIPHOMF_02719 1.8e-28 yneF S UPF0154 protein
LNIPHOMF_02720 2.2e-81 yneE S Sporulation inhibitor of replication protein sirA
LNIPHOMF_02721 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LNIPHOMF_02722 1.3e-32 ynzC S UPF0291 protein
LNIPHOMF_02723 9.2e-113 yneB L resolvase
LNIPHOMF_02724 3.4e-49 yneA D Inhibits cell division during the SOS response. Affects a later stage of the cell division protein assembly, after the assembly of the Z ring, by probably suppressing recruitment of FtsL and or DivIC to the division machinery
LNIPHOMF_02725 2.6e-109 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LNIPHOMF_02727 2e-79 fosB 2.5.1.18 H Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor
LNIPHOMF_02728 5.8e-74 yndM S Protein of unknown function (DUF2512)
LNIPHOMF_02729 8.6e-139 yndL S Replication protein
LNIPHOMF_02731 0.0 yndJ S YndJ-like protein
LNIPHOMF_02732 2.6e-117 yndH S Domain of unknown function (DUF4166)
LNIPHOMF_02733 7.7e-154 yndG S DoxX-like family
LNIPHOMF_02734 4.2e-220 gerLC S Spore germination protein
LNIPHOMF_02735 4.5e-197 gerAB U Spore germination
LNIPHOMF_02736 5.7e-286 gerAA EG Spore germination protein
LNIPHOMF_02739 5.2e-80 yndB S Activator of Hsp90 ATPase homolog 1-like protein
LNIPHOMF_02740 1.8e-71
LNIPHOMF_02741 7.9e-25 tatA U protein secretion
LNIPHOMF_02743 9.4e-175 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LNIPHOMF_02744 3.9e-97 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
LNIPHOMF_02745 8e-105 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
LNIPHOMF_02746 2.4e-39 yabK S Peptide ABC transporter permease
LNIPHOMF_02747 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LNIPHOMF_02748 1.5e-92 spoVT K stage V sporulation protein
LNIPHOMF_02749 2.4e-287 yabM S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
LNIPHOMF_02750 2.7e-245 mazG 3.6.1.66, 3.6.1.9 S COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like
LNIPHOMF_02751 1.1e-37 yabO J COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
LNIPHOMF_02752 1.5e-49 yabP S Sporulation protein YabP
LNIPHOMF_02753 3.9e-108 yabQ S spore cortex biosynthesis protein
LNIPHOMF_02754 1.1e-44 divIC D Septum formation initiator
LNIPHOMF_02755 8.5e-58 yabR J RNA binding protein (contains ribosomal protein S1 domain)
LNIPHOMF_02758 0.0 spoIIE 3.1.3.16, 3.1.3.3 KT stage II sporulation protein E
LNIPHOMF_02759 1.5e-124 yabS S protein containing a von Willebrand factor type A (vWA) domain
LNIPHOMF_02760 6.7e-187 KLT serine threonine protein kinase
LNIPHOMF_02761 3.5e-274 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
LNIPHOMF_02762 7.9e-94 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
LNIPHOMF_02763 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LNIPHOMF_02764 1.5e-146 coaX 2.7.1.33 F Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
LNIPHOMF_02765 2.9e-162 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
LNIPHOMF_02766 3.1e-153 yacD 5.2.1.8 O peptidyl-prolyl isomerase
LNIPHOMF_02767 8.9e-170 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
LNIPHOMF_02768 4.7e-271 pabB 2.6.1.85 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LNIPHOMF_02769 1.5e-106 pabA 2.6.1.85, 4.1.3.27 EH Anthranilate synthase
LNIPHOMF_02770 1.6e-168 pabC 2.6.1.42, 4.1.3.38 EH 4-amino-4-deoxychorismate lyase
LNIPHOMF_02771 2.6e-160 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LNIPHOMF_02772 8.2e-63 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LNIPHOMF_02773 2.7e-88 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LNIPHOMF_02774 4.1e-30 yazB K transcriptional
LNIPHOMF_02775 3.7e-190 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LNIPHOMF_02776 1.3e-287 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
LNIPHOMF_02777 6.9e-104 yjbC K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LNIPHOMF_02778 8.6e-196 yjbB EGP Major Facilitator Superfamily
LNIPHOMF_02779 5.5e-172 oppF E Belongs to the ABC transporter superfamily
LNIPHOMF_02780 3e-198 oppD P Belongs to the ABC transporter superfamily
LNIPHOMF_02781 7.7e-166 oppC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
LNIPHOMF_02782 2.7e-166 oppB P COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
LNIPHOMF_02783 0.0 oppA E ABC transporter substrate-binding protein
LNIPHOMF_02784 6.1e-185 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
LNIPHOMF_02785 5e-147 yjbA S Belongs to the UPF0736 family
LNIPHOMF_02786 7.9e-163 appC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
LNIPHOMF_02787 1.3e-171 oppB P COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
LNIPHOMF_02788 1.6e-251 appA E COG0747 ABC-type dipeptide transport system, periplasmic component
LNIPHOMF_02789 6.5e-187 appF E Belongs to the ABC transporter superfamily
LNIPHOMF_02790 1.8e-184 appD P Belongs to the ABC transporter superfamily
LNIPHOMF_02791 7.8e-151 yjaZ O Zn-dependent protease
LNIPHOMF_02792 1.8e-234 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
LNIPHOMF_02793 3.9e-173 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LNIPHOMF_02794 2.7e-22 yjzB
LNIPHOMF_02795 7.3e-26 comZ S ComZ
LNIPHOMF_02796 1.1e-183 med S Transcriptional activator protein med
LNIPHOMF_02797 7.3e-103 yjaV
LNIPHOMF_02798 6.2e-142 yjaU I carboxylic ester hydrolase activity
LNIPHOMF_02799 2.3e-16 yjzD S Protein of unknown function (DUF2929)
LNIPHOMF_02800 9.5e-28 yjzC S YjzC-like protein
LNIPHOMF_02801 3.8e-176 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LNIPHOMF_02802 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase ammonia chain
LNIPHOMF_02803 3.9e-206 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
LNIPHOMF_02804 4.4e-219 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
LNIPHOMF_02805 2.2e-137 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
LNIPHOMF_02806 3.1e-231 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
LNIPHOMF_02807 5.4e-200 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
LNIPHOMF_02808 6e-252 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LNIPHOMF_02809 3e-54 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
LNIPHOMF_02810 1.7e-118 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LNIPHOMF_02811 6.5e-108 jag S single-stranded nucleic acid binding R3H
LNIPHOMF_02812 3.1e-251 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
LNIPHOMF_02813 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
LNIPHOMF_02814 2.2e-131 rsmG 2.1.1.170 J Specifically methylates the N7 position of guanine in position 535 of 16S rRNA
LNIPHOMF_02815 1.9e-150 noc D Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage
LNIPHOMF_02816 1.5e-74 S Bacterial PH domain
LNIPHOMF_02817 2.2e-134 soj D COG1192 ATPases involved in chromosome partitioning
LNIPHOMF_02818 2.1e-149 spo0J K Belongs to the ParB family
LNIPHOMF_02819 1.6e-111 yyaC S Sporulation protein YyaC
LNIPHOMF_02820 8.1e-177 yyaD S Membrane
LNIPHOMF_02821 2.3e-33 yyzM S protein conserved in bacteria
LNIPHOMF_02822 0.0 yyaE C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
LNIPHOMF_02823 4e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
LNIPHOMF_02824 4.3e-46 rpsF J Binds together with S18 to 16S ribosomal RNA
LNIPHOMF_02825 2.9e-69 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
LNIPHOMF_02826 5.1e-37 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LNIPHOMF_02827 8.1e-145 xth 3.1.11.2 L exodeoxyribonuclease III
LNIPHOMF_02828 3.3e-180 ccpB 3.5.1.4, 5.1.1.1 K Transcriptional regulator
LNIPHOMF_02829 4e-68 yyaH 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LNIPHOMF_02830 5.1e-96 maa 2.3.1.79 S Bacterial transferase hexapeptide (six repeats)
LNIPHOMF_02831 3.8e-246 EGP Major facilitator superfamily
LNIPHOMF_02832 9.5e-169 yyaK S CAAX protease self-immunity
LNIPHOMF_02833 0.0 yyaL O COG1331 Highly conserved protein containing a thioredoxin domain
LNIPHOMF_02834 3.3e-161 yyaM EG EamA-like transporter family
LNIPHOMF_02835 1.4e-26 yyaN K MerR HTH family regulatory protein
LNIPHOMF_02836 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
LNIPHOMF_02837 1.1e-250 nagE 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G COG1263 Phosphotransferase system IIC components, glucose maltose N-acetylglucosamine-specific
LNIPHOMF_02838 1.1e-138 map 3.4.11.18 E Methionine aminopeptidase
LNIPHOMF_02839 2.4e-50 yflH S Protein of unknown function (DUF3243)
LNIPHOMF_02840 4.1e-19 yflI
LNIPHOMF_02841 4e-18 yflJ S Protein of unknown function (DUF2639)
LNIPHOMF_02842 9e-124 yflK S protein conserved in bacteria
LNIPHOMF_02843 2.9e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
LNIPHOMF_02844 1.3e-217 nos 1.14.14.47 C Belongs to the NOS family. Bacterial NOS oxygenase subfamily
LNIPHOMF_02845 5.5e-152 yflN S COG0491 Zn-dependent hydrolases, including glyoxylases
LNIPHOMF_02846 8.5e-227 citM C Citrate transporter
LNIPHOMF_02848 3e-181 yflP S Tripartite tricarboxylate transporter family receptor
LNIPHOMF_02849 8.9e-119 citT T response regulator
LNIPHOMF_02850 1e-290 citS 2.7.13.3 T Signal transduction histidine kinase regulating citrate malate metabolism
LNIPHOMF_02851 3.2e-235 yflS P Sodium:sulfate symporter transmembrane region
LNIPHOMF_02852 3.8e-240 pel 4.2.2.10, 4.2.2.2 G Pectate lyase
LNIPHOMF_02853 7.6e-58 yflT S Heat induced stress protein YflT
LNIPHOMF_02854 2.9e-24 S Protein of unknown function (DUF3212)
LNIPHOMF_02855 3.4e-169 fecB P COG4594 ABC-type Fe3 -citrate transport system, periplasmic component
LNIPHOMF_02856 4.3e-170 viuD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNIPHOMF_02857 1.2e-169 fecD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNIPHOMF_02858 1.1e-149 yfmF 3.6.3.34 P ATPases associated with a variety of cellular activities
LNIPHOMF_02859 3.3e-296 1.14.99.50 S Sulfatase-modifying factor enzyme 1
LNIPHOMF_02860 7.7e-214 G Major Facilitator Superfamily
LNIPHOMF_02861 9.2e-51 yqzD
LNIPHOMF_02862 1.9e-75 yqzC S YceG-like family
LNIPHOMF_02863 9.8e-146 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LNIPHOMF_02864 6.4e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LNIPHOMF_02865 4.4e-158 pstA P Phosphate transport system permease
LNIPHOMF_02866 1.3e-160 pstC P probably responsible for the translocation of the substrate across the membrane
LNIPHOMF_02867 5.3e-151 pstS P Phosphate
LNIPHOMF_02868 0.0 pbpA 3.4.16.4 M penicillin-binding protein
LNIPHOMF_02869 2.5e-231 yqgE EGP Major facilitator superfamily
LNIPHOMF_02870 2e-114 sodA 1.15.1.1 P radicals which are normally produced within the cells and which are toxic to biological systems
LNIPHOMF_02871 4e-73 yqgC S protein conserved in bacteria
LNIPHOMF_02872 8.5e-134 yqgB S Protein of unknown function (DUF1189)
LNIPHOMF_02873 2.2e-75 yqgA
LNIPHOMF_02874 5.2e-47 yqfZ M LysM domain
LNIPHOMF_02875 2.8e-202 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
LNIPHOMF_02876 4.3e-62 yqfX S membrane
LNIPHOMF_02877 1.2e-108 yqfW S Belongs to the 5'(3')-deoxyribonucleotidase family
LNIPHOMF_02878 1.9e-77 zur P Belongs to the Fur family
LNIPHOMF_02879 1.6e-157 yqfU S Uncharacterized protein conserved in bacteria (DUF2179)
LNIPHOMF_02880 2.1e-36 yqfT S Protein of unknown function (DUF2624)
LNIPHOMF_02881 8.8e-167 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
LNIPHOMF_02882 1.7e-243 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
LNIPHOMF_02883 2.9e-14 yqfQ S YqfQ-like protein
LNIPHOMF_02884 2.6e-177 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
LNIPHOMF_02885 5.1e-212 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LNIPHOMF_02886 6.1e-117 trmK 2.1.1.217 S SAM-dependent methyltransferase
LNIPHOMF_02887 1.6e-61 cccA C COG2010 Cytochrome c, mono- and diheme variants
LNIPHOMF_02888 1.5e-17 S SNARE associated Golgi protein
LNIPHOMF_02889 2.3e-33 yhcC S nucleic-acid-binding protein containing a Zn-ribbon domain
LNIPHOMF_02890 5.2e-101 sipT 3.4.21.89 U Belongs to the peptidase S26 family
LNIPHOMF_02891 6e-55 ypuD
LNIPHOMF_02892 1.3e-204 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LNIPHOMF_02893 1.5e-115 ribE 2.5.1.9 H Riboflavin synthase
LNIPHOMF_02894 9.8e-230 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LNIPHOMF_02895 3.9e-81 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
LNIPHOMF_02896 4.5e-64 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LNIPHOMF_02897 4.5e-94 ypuF S Domain of unknown function (DUF309)
LNIPHOMF_02898 4.5e-130 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
LNIPHOMF_02899 1.9e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LNIPHOMF_02900 4e-98 ypuI S Protein of unknown function (DUF3907)
LNIPHOMF_02901 1.2e-213 dacB 3.4.16.4 M Belongs to the peptidase S11 family
LNIPHOMF_02902 3.5e-103 spmA S Spore maturation protein
LNIPHOMF_02903 1.9e-87 spmB S Spore maturation protein
LNIPHOMF_02904 6.9e-133 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
LNIPHOMF_02905 1.3e-99 resA CO Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c
LNIPHOMF_02906 0.0 ccs1 O COG1333 ResB protein required for cytochrome c biosynthesis
LNIPHOMF_02907 3.9e-215 ccsA O 'COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component'
LNIPHOMF_02908 2.3e-133 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LNIPHOMF_02909 0.0 resE 2.7.13.3 T Histidine kinase
LNIPHOMF_02910 2.6e-103 sigX K Belongs to the sigma-70 factor family. ECF subfamily
LNIPHOMF_02911 6.8e-201 rsiX
LNIPHOMF_02912 9e-136 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
LNIPHOMF_02913 1.5e-294 serA 1.1.1.399, 1.1.1.95 E Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LNIPHOMF_02914 5.8e-87 fmnP U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
LNIPHOMF_02915 4.7e-41 fer C Ferredoxin
LNIPHOMF_02916 3.8e-201 ypbB 5.1.3.1 S protein conserved in bacteria
LNIPHOMF_02917 3.2e-286 recQ 3.6.4.12 L DNA helicase
LNIPHOMF_02918 2.2e-100 ypbD S metal-dependent membrane protease
LNIPHOMF_02919 4.6e-81 ypbE M Lysin motif
LNIPHOMF_02920 2.8e-81 ypbF S Protein of unknown function (DUF2663)
LNIPHOMF_02921 1.8e-147 ypbG S Calcineurin-like phosphoesterase superfamily domain
LNIPHOMF_02922 2.4e-104 mecB NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
LNIPHOMF_02923 2.6e-244 gudB 1.4.1.2, 1.4.1.3 E Belongs to the Glu Leu Phe Val dehydrogenases family
LNIPHOMF_02924 1.6e-174 ypdA 1.18.1.2, 1.19.1.1, 1.8.1.9 O COG0492 Thioredoxin reductase
LNIPHOMF_02925 1e-119 prsW S Involved in the degradation of specific anti-sigma factors
LNIPHOMF_02926 4.7e-155 sleB 3.5.1.28 M Spore cortex-lytic enzyme
LNIPHOMF_02927 6.5e-254 hemX 2.1.1.107, 4.2.1.75 H sporulation protein
LNIPHOMF_02928 9.2e-113 ypfA M Flagellar protein YcgR
LNIPHOMF_02929 1.8e-23 S Family of unknown function (DUF5359)
LNIPHOMF_02930 1.9e-113 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
LNIPHOMF_02931 4.3e-206 rpsA 1.17.7.4 J Ribosomal protein S1
LNIPHOMF_02932 4.1e-187 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
LNIPHOMF_02933 1e-07 S YpzI-like protein
LNIPHOMF_02934 1.3e-102 yphA
LNIPHOMF_02935 2.5e-161 seaA S YIEGIA protein
LNIPHOMF_02936 1.6e-28 ypzH
LNIPHOMF_02937 3.9e-248 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
LNIPHOMF_02938 1.4e-187 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
LNIPHOMF_02939 1.6e-18 yphE S Protein of unknown function (DUF2768)
LNIPHOMF_02940 5.4e-138 yphF
LNIPHOMF_02941 3.7e-279 spoIVA S ATPase. Has a role at an early stage in the morphogenesis of the spore coat
LNIPHOMF_02942 4.7e-42 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
LNIPHOMF_02943 7.1e-101 folE 3.5.4.16 H GTP cyclohydrolase
LNIPHOMF_02944 2.3e-34 mtrB K Required for transcription attenuation control in the Trp operon. This trans-acting factor seems to recognize a 10 bases nucleotide sequence in the Trp leader transcript causing transcription termination. Binds the leader RNA only in presence of L-tryptophan
LNIPHOMF_02945 5.6e-138 hepS 2.5.1.30 H Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
LNIPHOMF_02946 8.6e-133 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
LNIPHOMF_02947 4.5e-194 hepT 2.5.1.30, 2.5.1.83, 2.5.1.90 H Belongs to the FPP GGPP synthase family
LNIPHOMF_02948 9.1e-80 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
LNIPHOMF_02949 2.9e-142 cheR 2.1.1.80 NT COG1352 Methylase of chemotaxis methyl-accepting proteins
LNIPHOMF_02950 5.5e-217 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
LNIPHOMF_02951 8.1e-207 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
LNIPHOMF_02952 1e-63 aroH 2.7.4.25, 5.4.99.5 E Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis
LNIPHOMF_02953 6.6e-295 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LNIPHOMF_02954 1.2e-180 trpD 2.4.2.18, 4.1.3.27 E Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LNIPHOMF_02955 4.7e-113 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
LNIPHOMF_02956 6.5e-119 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E Belongs to the TrpF family
LNIPHOMF_02957 4e-231 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
LNIPHOMF_02958 5.5e-144 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
LNIPHOMF_02959 2.9e-204 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LNIPHOMF_02960 1.2e-208 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
LNIPHOMF_02961 8.9e-237 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
LNIPHOMF_02962 4.1e-234 S COG0457 FOG TPR repeat
LNIPHOMF_02963 2.8e-99 ypiB S Belongs to the UPF0302 family
LNIPHOMF_02964 8.5e-78 ypiF S Protein of unknown function (DUF2487)
LNIPHOMF_02965 9.3e-97 qcrA C Menaquinol-cytochrome c reductase
LNIPHOMF_02966 5.2e-127 petB C COG1290 Cytochrome b subunit of the bc complex
LNIPHOMF_02967 1.5e-146 qcrC C Menaquinol-cytochrome c reductase cytochrome b c subunit
LNIPHOMF_02968 4.4e-98 ypjA S membrane
LNIPHOMF_02969 1.5e-139 ypjB S sporulation protein
LNIPHOMF_02970 8.1e-157 ypjC S Uncharacterized protein conserved in bacteria (DUF2179)
LNIPHOMF_02971 3.1e-56 ypjD 2.5.1.19 S Nucleotide pyrophosphohydrolase
LNIPHOMF_02972 6.3e-148 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
LNIPHOMF_02973 6.5e-72 mgsA 2.7.1.24, 4.2.3.3 G methylglyoxal synthase
LNIPHOMF_02974 6.9e-130 bshB1 S proteins, LmbE homologs
LNIPHOMF_02975 3.7e-210 bshA GT4 M N-acetyl-alpha-D-glucosaminyl L-malate synthase
LNIPHOMF_02976 4.4e-222 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
LNIPHOMF_02977 8.7e-184 birA 6.3.4.15 K Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
LNIPHOMF_02978 1.4e-150 panB 2.1.2.11 H Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
LNIPHOMF_02979 1.2e-157 panC 2.7.4.25, 6.3.2.1 H Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
LNIPHOMF_02980 3.5e-64 panD 4.1.1.11 H Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
LNIPHOMF_02981 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
LNIPHOMF_02982 6.7e-23 ypmA S Protein of unknown function (DUF4264)
LNIPHOMF_02983 3.4e-80 ypmB S protein conserved in bacteria
LNIPHOMF_02984 1.5e-222 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
LNIPHOMF_02985 5.8e-252 asnS 6.1.1.22 J asparaginyl-tRNA
LNIPHOMF_02986 5.7e-129 dnaD L DNA replication protein DnaD
LNIPHOMF_02987 2.2e-122 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LNIPHOMF_02988 4.7e-93 ypoC
LNIPHOMF_02989 0.0 ponA 2.4.1.129, 2.7.7.7, 3.4.16.4 GT51 M penicillin-binding protein
LNIPHOMF_02990 1.2e-114 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
LNIPHOMF_02991 2.6e-188 yppC S Protein of unknown function (DUF2515)
LNIPHOMF_02994 2e-11 yppE S Bacterial domain of unknown function (DUF1798)
LNIPHOMF_02996 1.2e-48 yppG S YppG-like protein
LNIPHOMF_02997 8.6e-72 hspX O Belongs to the small heat shock protein (HSP20) family
LNIPHOMF_02998 1.6e-81 ypqE 2.7.1.199 G COG2190 Phosphotransferase system IIA components
LNIPHOMF_02999 0.0 yprA L COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster
LNIPHOMF_03000 1.3e-237 yprB L RNase_H superfamily
LNIPHOMF_03001 3.3e-92 ypsA S Belongs to the UPF0398 family
LNIPHOMF_03002 2.8e-45 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
LNIPHOMF_03003 5.4e-225 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
LNIPHOMF_03005 0.0 ypvA 3.6.4.12 KL COG1199 Rad3-related DNA helicases
LNIPHOMF_03006 4.1e-122 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LNIPHOMF_03007 1.7e-159 kduI 5.3.1.17 G Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
LNIPHOMF_03008 3.9e-187 ptxS K transcriptional
LNIPHOMF_03009 2.9e-187 kdgK 2.7.1.45 G COG0524 Sugar kinases, ribokinase family
LNIPHOMF_03010 7e-104 eda 2.7.1.45, 4.1.2.14, 4.1.3.42 G 2-dehydro-3-deoxy-phosphogluconate aldolase
LNIPHOMF_03011 5e-171 kdgT P The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system
LNIPHOMF_03012 4.2e-294 ypwA 3.4.17.19 E Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
LNIPHOMF_03013 8.8e-99 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
LNIPHOMF_03014 1.6e-228 pbuX F xanthine
LNIPHOMF_03015 4.4e-208 bcsA Q Naringenin-chalcone synthase
LNIPHOMF_03016 5.1e-87 ypbQ S protein conserved in bacteria
LNIPHOMF_03017 0.0 ypbR S Dynamin family
LNIPHOMF_03018 1e-38 ypbS S Protein of unknown function (DUF2533)
LNIPHOMF_03019 2e-07
LNIPHOMF_03020 1.5e-166 polA 2.7.7.7 L 5'3' exonuclease
LNIPHOMF_03022 8.5e-69 rnhA 3.1.26.4 L Ribonuclease
LNIPHOMF_03023 5.4e-107 ypdP S Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
LNIPHOMF_03024 8.9e-127 ypeP 3.1.26.4 L COG0328 Ribonuclease HI
LNIPHOMF_03025 2.6e-27 ypeQ S Zinc-finger
LNIPHOMF_03026 8.1e-31 S Protein of unknown function (DUF2564)
LNIPHOMF_03027 3.8e-16 degR
LNIPHOMF_03028 7.9e-31 cspD K Cold-shock protein
LNIPHOMF_03029 2e-216 ugtP 2.4.1.315 GT28 M Processive glucosyltransferase involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. Is able to successively transfer up to three glucosyl residues to diacylglycerol (DAG), thereby catalyzing the formation of beta-monoglucosyl-DAG (3-O-(beta-D-glucopyranosyl)-1,2-diacyl- sn-glycerol), beta-diglucosyl-DAG (3-O-(beta-D-glucopyranosyl- beta-(1- 6)-D-glucopyranosyl)-1,2-diacyl-sn-glycerol) and beta- triglucosyl-DAG (3-O-(beta-D-glucopyranosyl-beta-(1- 6)-D- glucopyranosyl-beta-(1- 6)-D-glucopyranosyl)-1,2-diacyl-sn- glycerol). Beta-diglucosyl-DAG is the predominant glycolipid found in Bacillales and is also used as a membrane anchor for lipoteichoic acid (LTA)
LNIPHOMF_03030 1.2e-45 ytvB S Protein of unknown function (DUF4257)
LNIPHOMF_03031 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
LNIPHOMF_03032 2.1e-51 ytwF P Sulfurtransferase
LNIPHOMF_03033 4e-253 melA 3.2.1.122, 3.2.1.22, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase
LNIPHOMF_03034 1.5e-144 amyC P ABC transporter (permease)
LNIPHOMF_03035 3.7e-168 amyD P ABC transporter
LNIPHOMF_03036 2.3e-248 msmE G Bacterial extracellular solute-binding protein
LNIPHOMF_03037 2.3e-190 msmR K Transcriptional regulator
LNIPHOMF_03038 1.3e-173 ytaP S Acetyl xylan esterase (AXE1)
LNIPHOMF_03039 1.6e-142 bioW 2.3.1.47, 6.2.1.14 H Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP
LNIPHOMF_03040 2.4e-261 bioA 2.6.1.105, 2.6.1.62 H Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor
LNIPHOMF_03041 1.4e-220 bioF 2.3.1.29, 2.3.1.47, 6.2.1.14 H Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
LNIPHOMF_03042 3.7e-128 bioD 6.3.3.3 H Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
LNIPHOMF_03043 2.2e-190 bioB 2.8.1.6 H Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
LNIPHOMF_03044 1.9e-225 bioI 1.14.14.46 C Cytochrome P450
LNIPHOMF_03045 9.6e-138 udh 1.1.1.203, 1.1.1.388 GM NAD dependent epimerase/dehydratase family
LNIPHOMF_03046 1.5e-150 ytcP G COG0395 ABC-type sugar transport system, permease component
LNIPHOMF_03047 1.2e-290 ytcQ G COG1653 ABC-type sugar transport system, periplasmic component
LNIPHOMF_03048 0.0 ytdP K Transcriptional regulator
LNIPHOMF_03049 9.5e-226 yraO C Citrate transporter
LNIPHOMF_03050 4.5e-188 yrpG C Aldo/keto reductase family
LNIPHOMF_03051 6.3e-96 sigZ K Belongs to the sigma-70 factor family. ECF subfamily
LNIPHOMF_03052 5.4e-117 adcA S ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
LNIPHOMF_03054 3e-125 yrpD S Domain of unknown function, YrpD
LNIPHOMF_03055 7.4e-149 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
LNIPHOMF_03056 1.5e-194 yrpB 1.13.12.16 S COG2070 Dioxygenases related to 2-nitropropane dioxygenase
LNIPHOMF_03057 7.6e-168 aadK G Streptomycin adenylyltransferase
LNIPHOMF_03058 1.2e-91 yrdA S DinB family
LNIPHOMF_03059 1.9e-57 S Protein of unknown function (DUF2568)
LNIPHOMF_03060 3.1e-101 yrdC 3.5.1.19 Q Isochorismatase family
LNIPHOMF_03062 9.2e-231 cypA C Cytochrome P450
LNIPHOMF_03063 4.1e-46 yrdF K ribonuclease inhibitor
LNIPHOMF_03064 2.2e-79 bkdR K helix_turn_helix ASNC type
LNIPHOMF_03065 3.3e-138 azlC E AzlC protein
LNIPHOMF_03066 2.5e-50 azlD E Branched-chain amino acid transport protein (AzlD)
LNIPHOMF_03067 1.5e-231 brnQ E Component of the transport system for branched-chain amino acids
LNIPHOMF_03069 7.7e-163 gltR K LysR substrate binding domain
LNIPHOMF_03070 1.3e-66 yodA S tautomerase
LNIPHOMF_03071 1.1e-132 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LNIPHOMF_03072 0.0 vicK 2.7.13.3 T Histidine kinase
LNIPHOMF_03073 3.6e-260 yycH S protein conserved in bacteria
LNIPHOMF_03074 7.3e-155 yycI S protein conserved in bacteria
LNIPHOMF_03075 8.7e-150 vicX 3.1.26.11 S COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I
LNIPHOMF_03076 8.4e-221 htrA 3.4.21.107 O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LNIPHOMF_03077 1.5e-258 rocR KT COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
LNIPHOMF_03078 1.7e-234 rocD 2.6.1.11, 2.6.1.13, 2.6.1.17 E Catalyzes the interconversion of ornithine to glutamate semialdehyde
LNIPHOMF_03079 9.7e-261 rocE E amino acid
LNIPHOMF_03080 2.3e-167 rocF 3.5.3.1, 3.5.3.11 E Belongs to the arginase family
LNIPHOMF_03082 5e-188 S aspartate phosphatase
LNIPHOMF_03083 3.1e-86 yycN 2.3.1.128 K Acetyltransferase
LNIPHOMF_03084 5.8e-132 yycO S Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
LNIPHOMF_03085 1.6e-221 yycP
LNIPHOMF_03086 2.1e-33 yycQ S Protein of unknown function (DUF2651)
LNIPHOMF_03088 3e-234 fdhA 1.1.1.1, 1.1.1.14, 1.1.1.284, 1.2.1.46 E COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
LNIPHOMF_03089 4.2e-71
LNIPHOMF_03090 1.1e-09 S YyzF-like protein
LNIPHOMF_03091 5.2e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LNIPHOMF_03093 3.8e-234 oxdC 4.1.1.2 G Oxalate decarboxylase
LNIPHOMF_03095 1.5e-146 yoaP 3.1.3.18 K YoaP-like
LNIPHOMF_03096 1.2e-66 yoaQ S Evidence 4 Homologs of previously reported genes of
LNIPHOMF_03097 4.1e-89
LNIPHOMF_03098 2.4e-172 yoaR V vancomycin resistance protein
LNIPHOMF_03099 4.3e-75 yoaS S Protein of unknown function (DUF2975)
LNIPHOMF_03100 4.2e-37 yozG K Transcriptional regulator
LNIPHOMF_03101 1.1e-149 yoaT S Protein of unknown function (DUF817)
LNIPHOMF_03102 8.6e-159 yoaU K LysR substrate binding domain
LNIPHOMF_03103 6e-160 yijE EG EamA-like transporter family
LNIPHOMF_03104 3.7e-78 yoaW
LNIPHOMF_03105 1.1e-118 yoaZ 1.11.1.6, 3.5.1.124 S DJ-1/PfpI family
LNIPHOMF_03106 2.3e-170 bla 3.5.2.6 V beta-lactamase
LNIPHOMF_03110 0.0 pps 2.7.9.2 GT phosphoenolpyruvate synthase
LNIPHOMF_03111 1.8e-121 xlnB 3.2.1.8 G Glycosyl hydrolases family 11
LNIPHOMF_03112 1.4e-37 S TM2 domain
LNIPHOMF_03113 5.7e-58 K Helix-turn-helix
LNIPHOMF_03115 1.4e-83 bltD 2.3.1.57 K FR47-like protein
LNIPHOMF_03116 3.5e-211 blt EGP Major facilitator Superfamily
LNIPHOMF_03117 4.8e-151 bltR K helix_turn_helix, mercury resistance
LNIPHOMF_03119 2.6e-108 yrkC G Cupin domain
LNIPHOMF_03120 7.8e-39 yrkD S protein conserved in bacteria
LNIPHOMF_03121 5.1e-84 yrkE O DsrE/DsrF/DrsH-like family
LNIPHOMF_03122 1.7e-99 yrkF OP Belongs to the sulfur carrier protein TusA family
LNIPHOMF_03123 2.3e-212 yrkH P Rhodanese Homology Domain
LNIPHOMF_03124 2.4e-36 yrkI O Belongs to the sulfur carrier protein TusA family
LNIPHOMF_03125 4.3e-117 yrkJ S membrane transporter protein
LNIPHOMF_03126 2.8e-79 S Protein of unknown function with HXXEE motif
LNIPHOMF_03127 1.5e-97 ywrO S Flavodoxin-like fold
LNIPHOMF_03128 6e-105 yrkN K Acetyltransferase (GNAT) family
LNIPHOMF_03129 8.2e-224 yrkO P Protein of unknown function (DUF418)
LNIPHOMF_03130 1.1e-127 T Transcriptional regulator
LNIPHOMF_03131 9e-237 yrkQ T Histidine kinase
LNIPHOMF_03132 2e-68 psiE S Protein PsiE homolog
LNIPHOMF_03133 2.2e-61 sigK K sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LNIPHOMF_03134 1.4e-100 yqaB E IrrE N-terminal-like domain
LNIPHOMF_03135 1e-101 adk 2.7.4.3 F adenylate kinase activity
LNIPHOMF_03137 2e-203 ybcL EGP Major facilitator Superfamily
LNIPHOMF_03139 9.1e-239 J 4Fe-4S single cluster domain
LNIPHOMF_03140 1.6e-277 V CAAX protease self-immunity
LNIPHOMF_03141 1.9e-135 skfE V ABC transporter
LNIPHOMF_03142 4e-248 skfF S ABC transporter
LNIPHOMF_03143 7.8e-91 C HEAT repeats
LNIPHOMF_03144 9.6e-79 txn CO Thioredoxin-like
LNIPHOMF_03145 6.2e-182 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
LNIPHOMF_03146 1.5e-123 T Transcriptional regulatory protein, C terminal
LNIPHOMF_03147 1.8e-173 T His Kinase A (phospho-acceptor) domain
LNIPHOMF_03149 1.6e-140 KLT Protein tyrosine kinase
LNIPHOMF_03150 4.8e-154 ybdN
LNIPHOMF_03151 1.5e-217 ybdO S Domain of unknown function (DUF4885)
LNIPHOMF_03152 2.4e-259 yifK E COG1113 Gamma-aminobutyrate permease and related permeases
LNIPHOMF_03153 3.7e-38 csgA S Sigma-G-dependent sporulation-specific SASP protein
LNIPHOMF_03154 4.9e-30 ybxH S Family of unknown function (DUF5370)
LNIPHOMF_03155 7.2e-152 ybxI 3.5.2.6 V beta-lactamase
LNIPHOMF_03156 1.4e-247 cypC 1.11.2.4, 1.14.14.1 Q Cytochrome P450
LNIPHOMF_03157 4.9e-41 ybyB
LNIPHOMF_03168 1.5e-255 dcm 2.1.1.37 L DNA (cytosine-5-)-methyltransferase activity
LNIPHOMF_03170 1.2e-96 yorS 3.1.3.5 S 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
LNIPHOMF_03171 5.9e-88 tmk 2.1.1.45, 2.7.4.9 F dTDP biosynthetic process
LNIPHOMF_03176 9.9e-115 DR0488 S protein conserved in bacteria
LNIPHOMF_03177 0.0 2.7.7.7 L DNA polymerase
LNIPHOMF_03178 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
LNIPHOMF_03179 1.2e-224 L DNA primase activity
LNIPHOMF_03180 3.6e-285 3.6.4.12 J DnaB-like helicase C terminal domain
LNIPHOMF_03181 1.4e-86
LNIPHOMF_03182 7.6e-180 L AAA domain
LNIPHOMF_03183 1.3e-170
LNIPHOMF_03185 1.6e-232 ydiP 2.1.1.37 H Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
LNIPHOMF_03186 1.1e-250 2.1.1.37 L DNA (cytosine-5-)-methyltransferase activity
LNIPHOMF_03187 6.4e-66 KL Phage plasmid primase P4 family
LNIPHOMF_03189 1.2e-281 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
LNIPHOMF_03190 1.3e-42 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
LNIPHOMF_03191 7.9e-129 ydiL S CAAX protease self-immunity
LNIPHOMF_03192 2.9e-27 ydiK S Domain of unknown function (DUF4305)
LNIPHOMF_03193 8.4e-126 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
LNIPHOMF_03194 7.5e-22 tatA U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
LNIPHOMF_03195 8.8e-116 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
LNIPHOMF_03196 5.5e-89 moaC 4.6.1.17 H Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
LNIPHOMF_03197 0.0 ydiF S ABC transporter
LNIPHOMF_03198 3.6e-188 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LNIPHOMF_03199 1.3e-84 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
LNIPHOMF_03200 9e-127 yeaZ 2.3.1.234 O COG1214 Inactive homolog of metal-dependent proteases
LNIPHOMF_03201 9.1e-86 ydiB 2.7.1.221, 5.1.1.1 S ATPase or kinase
LNIPHOMF_03202 4.6e-185 thiL 2.7.4.16 H Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
LNIPHOMF_03206 0.0 M Parallel beta-helix repeats
LNIPHOMF_03207 7.7e-149 S Pfam:DUF867
LNIPHOMF_03210 1e-130 yoqW S Belongs to the SOS response-associated peptidase family
LNIPHOMF_03211 2.4e-155 ligB 6.5.1.1, 6.5.1.6, 6.5.1.7 L ATP-dependent DNA ligase
LNIPHOMF_03212 2.3e-77
LNIPHOMF_03219 1e-44
LNIPHOMF_03221 1.5e-97 S Protein of unknown function (DUF1273)
LNIPHOMF_03223 3e-78 yoqH M LysM domain
LNIPHOMF_03226 8.8e-12 S Protein of unknown function (DUF2815)
LNIPHOMF_03227 6.2e-137 kilA S Phage regulatory protein Rha (Phage_pRha)
LNIPHOMF_03238 1.1e-33 K Transcriptional regulator
LNIPHOMF_03239 2.1e-177
LNIPHOMF_03240 1.6e-70 ypoP K transcriptional
LNIPHOMF_03241 2.6e-223 mepA V MATE efflux family protein
LNIPHOMF_03242 5.5e-29 ypmT S Uncharacterized ympT
LNIPHOMF_03243 5e-99 ypmS S protein conserved in bacteria
LNIPHOMF_03244 1.3e-137 ypmR E GDSL-like Lipase/Acylhydrolase
LNIPHOMF_03245 3.2e-109 ypmQ S protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems
LNIPHOMF_03246 3.1e-40 ypmP S Protein of unknown function (DUF2535)
LNIPHOMF_03247 4.4e-244 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LNIPHOMF_03248 1.6e-185 pspF K Transcriptional regulator
LNIPHOMF_03249 4.2e-110 hlyIII S protein, Hemolysin III
LNIPHOMF_03250 7.4e-112 ypkP 2.3.1.51 I Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
LNIPHOMF_03251 7.9e-96 folA 1.1.1.262, 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LNIPHOMF_03252 4.3e-157 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LNIPHOMF_03253 3.3e-92 pgpA 3.1.3.27 I COG1267 Phosphatidylglycerophosphatase A and related proteins
LNIPHOMF_03254 7.8e-114 ypjP S YpjP-like protein
LNIPHOMF_03255 1.3e-145 ypiP 2.1.1.242 AJ Putative SAM-dependent methyltransferase
LNIPHOMF_03256 1.7e-75 yphP S Belongs to the UPF0403 family
LNIPHOMF_03257 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
LNIPHOMF_03258 1.8e-156 ypgR C COG0694 Thioredoxin-like proteins and domains
LNIPHOMF_03259 3.1e-110 ypgQ S phosphohydrolase
LNIPHOMF_03260 2.3e-89 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
LNIPHOMF_03261 7.3e-177 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LNIPHOMF_03262 3.4e-39 S COG NOG14552 non supervised orthologous group
LNIPHOMF_03263 6.7e-167 ygxA S Nucleotidyltransferase-like
LNIPHOMF_03264 1.5e-56 ygzB S UPF0295 protein
LNIPHOMF_03265 4e-80 perR P Belongs to the Fur family
LNIPHOMF_03266 2.8e-87 bcp 1.11.1.15 O Peroxiredoxin
LNIPHOMF_03267 1.2e-246 gsaB 5.4.3.8 H Glutamate-1-semialdehyde aminotransferase
LNIPHOMF_03268 8.7e-180 ygaE S Membrane
LNIPHOMF_03269 1.8e-301 ygaD V ABC transporter
LNIPHOMF_03270 1.3e-104 ygaC J Belongs to the UPF0374 family
LNIPHOMF_03271 1.5e-37 ygaB S YgaB-like protein
LNIPHOMF_03272 2.4e-08 sspE S Small, acid-soluble spore protein, gamma-type
LNIPHOMF_03273 2.9e-134 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LNIPHOMF_03274 6.9e-36 yfhS
LNIPHOMF_03275 7.8e-212 mutY L A G-specific
LNIPHOMF_03276 5.5e-186 yfhP S membrane-bound metal-dependent
LNIPHOMF_03277 0.0 yfhO S Bacterial membrane protein YfhO
LNIPHOMF_03278 2.7e-185 csbB GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
LNIPHOMF_03279 6.7e-172 yfhM S Alpha beta hydrolase
LNIPHOMF_03280 3.5e-51 yfhL S SdpI/YhfL protein family
LNIPHOMF_03281 9.2e-92 batE T Bacterial SH3 domain homologues
LNIPHOMF_03282 1.3e-44 yfhJ S WVELL protein
LNIPHOMF_03283 6.2e-20 sspK S reproduction
LNIPHOMF_03284 1.1e-209 yfhI EGP Major facilitator Superfamily
LNIPHOMF_03286 9.7e-52 yfhH S Protein of unknown function (DUF1811)
LNIPHOMF_03287 1.1e-141 recX 2.4.1.337 GT4 S Modulates RecA activity
LNIPHOMF_03288 4.9e-173 yfhF S nucleoside-diphosphate sugar epimerase
LNIPHOMF_03290 2.1e-25 yfhD S YfhD-like protein
LNIPHOMF_03291 3.9e-107 yfhC C nitroreductase
LNIPHOMF_03292 1.8e-167 yfhB 5.3.3.17 S PhzF family
LNIPHOMF_03293 5.2e-171 yfhA P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNIPHOMF_03294 3.1e-176 yfiZ P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LNIPHOMF_03295 6.2e-182 yfiY P ABC transporter substrate-binding protein
LNIPHOMF_03296 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
LNIPHOMF_03297 3.1e-81 yfiV K transcriptional
LNIPHOMF_03298 8.7e-287 yfiU EGP Major facilitator Superfamily
LNIPHOMF_03299 3.3e-100 yfiT S Belongs to the metal hydrolase YfiT family
LNIPHOMF_03300 5.1e-221 yfiS EGP Major facilitator Superfamily
LNIPHOMF_03301 2e-109 yfiR K Transcriptional regulator
LNIPHOMF_03302 9e-198 yfiQ G COG3936 Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
LNIPHOMF_03303 4.4e-80 estA 3.1.1.3 S acetyltransferases and hydrolases with the alpha beta hydrolase fold
LNIPHOMF_03304 8.3e-99 padR K transcriptional
LNIPHOMF_03305 4.6e-208 V COG0842 ABC-type multidrug transport system, permease component
LNIPHOMF_03306 9.8e-214 V ABC-2 family transporter protein
LNIPHOMF_03307 6.2e-171 V ABC transporter, ATP-binding protein
LNIPHOMF_03308 3.2e-113 KT LuxR family transcriptional regulator
LNIPHOMF_03309 1.1e-214 yxjM T Histidine kinase
LNIPHOMF_03311 1.1e-233 S Oxidoreductase
LNIPHOMF_03312 8.4e-184 G Xylose isomerase
LNIPHOMF_03313 1.8e-262 iolT EGP Major facilitator Superfamily
LNIPHOMF_03314 1.5e-177 K AraC-like ligand binding domain
LNIPHOMF_03315 5.7e-163 yfiE 1.13.11.2 S glyoxalase
LNIPHOMF_03316 9.8e-65 mhqP S DoxX
LNIPHOMF_03317 0.0 yfiC V COG1132 ABC-type multidrug transport system, ATPase and permease components
LNIPHOMF_03318 2.1e-310 yfiB3 V ABC transporter
LNIPHOMF_03319 4.7e-296 glvC 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
LNIPHOMF_03320 2.1e-140 glvR K Helix-turn-helix domain, rpiR family
LNIPHOMF_03321 9.9e-263 aglB 3.2.1.122, 3.2.1.22, 3.2.1.86 GH4,GT4 G COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
LNIPHOMF_03322 1.1e-44 yfjA S Belongs to the WXG100 family
LNIPHOMF_03323 9.2e-191 yfjB
LNIPHOMF_03324 4.1e-144 yfjC
LNIPHOMF_03325 1.8e-101 yfjD S Family of unknown function (DUF5381)
LNIPHOMF_03326 1.3e-80 S Family of unknown function (DUF5381)
LNIPHOMF_03327 4e-56 yfjF S UPF0060 membrane protein
LNIPHOMF_03328 1.2e-25 sspH S Belongs to the SspH family
LNIPHOMF_03329 0.0 acoR KQ COG3284 Transcriptional activator of acetoin glycerol metabolism
LNIPHOMF_03330 6.4e-257 acoL 1.8.1.4 C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
LNIPHOMF_03331 2.9e-197 acoC 2.3.1.12, 2.3.1.61 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
LNIPHOMF_03332 1e-190 acoB C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
LNIPHOMF_03333 1.2e-191 acoA C COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
LNIPHOMF_03334 3e-29 yfjL
LNIPHOMF_03335 3.9e-86 yfjM S Psort location Cytoplasmic, score
LNIPHOMF_03336 5.1e-192 yfjN J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LNIPHOMF_03337 1.6e-39 S YfzA-like protein
LNIPHOMF_03338 1.1e-267 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LNIPHOMF_03339 1e-167 yfjP 3.2.2.21 L COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
LNIPHOMF_03340 1.7e-184 corA P Mediates influx of magnesium ions
LNIPHOMF_03341 4.2e-150 yfjR 1.1.1.31 I NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
LNIPHOMF_03342 2.6e-154 pdaA G deacetylase
LNIPHOMF_03343 1.1e-26 yfjT
LNIPHOMF_03344 5.4e-222 yfkA S YfkB-like domain
LNIPHOMF_03345 6e-149 yfkC M Mechanosensitive ion channel
LNIPHOMF_03346 1.2e-146 yfkD S YfkD-like protein
LNIPHOMF_03347 6.1e-183 cax P COG0387 Ca2 H antiporter
LNIPHOMF_03348 6.9e-220 ycaD EGP COG0477 Permeases of the major facilitator superfamily
LNIPHOMF_03349 5e-08
LNIPHOMF_03350 9.7e-144 yihY S Belongs to the UPF0761 family
LNIPHOMF_03351 8.4e-51 yfkI S gas vesicle protein
LNIPHOMF_03352 2.2e-84 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LNIPHOMF_03353 2.1e-29 yfkK S Belongs to the UPF0435 family
LNIPHOMF_03354 6.8e-207 ydiM EGP Major facilitator Superfamily
LNIPHOMF_03355 1.6e-91 yfkM 1.11.1.6, 3.5.1.124 S protease
LNIPHOMF_03356 0.0 cpdB 3.1.3.5, 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
LNIPHOMF_03357 1.6e-125 yfkO C nitroreductase
LNIPHOMF_03358 1.8e-133 treR K transcriptional
LNIPHOMF_03359 0.0 treC 3.2.1.93 GH13 G COG0366 Glycosidases
LNIPHOMF_03360 8.5e-257 treP 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
LNIPHOMF_03361 1.5e-283 yfkQ EG Spore germination protein
LNIPHOMF_03362 5.1e-207 yfkR S spore germination
LNIPHOMF_03364 1.6e-194 E Spore germination protein
LNIPHOMF_03365 7.2e-256 agcS_1 E Sodium alanine symporter
LNIPHOMF_03366 6e-67 yhdN S Domain of unknown function (DUF1992)
LNIPHOMF_03367 8.3e-96 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LNIPHOMF_03368 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LNIPHOMF_03369 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LNIPHOMF_03370 1.7e-248 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LNIPHOMF_03371 8e-78 yycE 3.4.21.26, 5.3.1.24 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LNIPHOMF_03372 3e-251 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
LNIPHOMF_03373 1.9e-29 yycD S Uncharacterized protein conserved in bacteria (DUF2188)
LNIPHOMF_03375 1.9e-15 yycC K YycC-like protein
LNIPHOMF_03376 8.4e-221 yeaN P COG2807 Cyanate permease
LNIPHOMF_03377 0.0 yycA M COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LNIPHOMF_03378 2.2e-73 rplI J binds to the 23S rRNA
LNIPHOMF_03379 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
LNIPHOMF_03380 2.9e-160 yybS S membrane
LNIPHOMF_03382 3.9e-84 cotF M Spore coat protein
LNIPHOMF_03383 1.4e-68 ydeP3 K Transcriptional regulator
LNIPHOMF_03384 1.1e-164 ppaC 3.6.1.1 C Inorganic pyrophosphatase
LNIPHOMF_03385 1.3e-70
LNIPHOMF_03387 2.3e-240 yybO G COG0477 Permeases of the major facilitator superfamily
LNIPHOMF_03388 1e-16
LNIPHOMF_03391 2.1e-193 xerH A Belongs to the 'phage' integrase family
LNIPHOMF_03392 6.3e-70
LNIPHOMF_03393 2.5e-86
LNIPHOMF_03394 2.5e-10 xkdX
LNIPHOMF_03395 8.1e-07
LNIPHOMF_03396 1.1e-172
LNIPHOMF_03397 1.3e-57
LNIPHOMF_03400 1.6e-90
LNIPHOMF_03401 8.1e-131
LNIPHOMF_03402 2.6e-91
LNIPHOMF_03403 1.4e-121
LNIPHOMF_03405 1.1e-68
LNIPHOMF_03406 5.1e-81
LNIPHOMF_03407 5.7e-186
LNIPHOMF_03408 1.6e-94
LNIPHOMF_03409 2.1e-266
LNIPHOMF_03410 6.3e-282
LNIPHOMF_03411 0.0 gp17a S Terminase-like family
LNIPHOMF_03412 1.8e-175
LNIPHOMF_03414 3.6e-62
LNIPHOMF_03415 0.0 XK26_06135 M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
LNIPHOMF_03416 6.2e-145 S Phage tail protein
LNIPHOMF_03417 0.0 S Pfam Transposase IS66
LNIPHOMF_03418 6.4e-115
LNIPHOMF_03419 0.0 G Exopolysaccharide biosynthesis protein
LNIPHOMF_03420 6.5e-164
LNIPHOMF_03422 1.6e-186 3.5.1.28 M Ami_2
LNIPHOMF_03423 4.4e-32 bhlA S BhlA holin family
LNIPHOMF_03424 4.1e-139 amj U Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane
LNIPHOMF_03425 5.1e-47 ydzA EGP Major facilitator Superfamily
LNIPHOMF_03426 2.5e-74 lrpC K Transcriptional regulator
LNIPHOMF_03427 0.0 topB 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LNIPHOMF_03428 1.9e-208 ydaJ M Belongs to the glycosyl hydrolase 8 (cellulase D) family
LNIPHOMF_03429 2e-152 ydaK T Diguanylate cyclase, GGDEF domain
LNIPHOMF_03430 0.0 ydaL S Uncharacterized protein conserved in bacteria (DUF2334)
LNIPHOMF_03431 4.5e-233 ydaM M Glycosyl transferase family group 2
LNIPHOMF_03432 0.0 ydaN S Bacterial cellulose synthase subunit
LNIPHOMF_03433 0.0 ydaO E amino acid
LNIPHOMF_03434 4.6e-79 mutT 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
LNIPHOMF_03435 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
LNIPHOMF_03436 9.3e-77 yqiW S Belongs to the UPF0403 family
LNIPHOMF_03437 8.8e-167 yegS 2.7.1.107 I COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
LNIPHOMF_03438 7.9e-208 norA EGP Major facilitator Superfamily
LNIPHOMF_03439 2.6e-152 bmrR K helix_turn_helix, mercury resistance
LNIPHOMF_03440 3.5e-233 bfmBB 2.3.1.168, 2.3.1.61 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
LNIPHOMF_03441 1.8e-184 bfmBAB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
LNIPHOMF_03442 1.9e-186 bfmBAA 1.2.4.4 C COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
LNIPHOMF_03443 3.4e-269 lpdA 1.8.1.4 C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
LNIPHOMF_03444 1.2e-202 buk 2.7.2.7 C Belongs to the acetokinase family
LNIPHOMF_03445 2.2e-207 ldh 1.4.1.9 E Belongs to the Glu Leu Phe Val dehydrogenases family
LNIPHOMF_03446 7.1e-156 pta 2.3.1.19, 2.3.1.8 C phosphate butyryltransferase
LNIPHOMF_03447 0.0 bkdR 2.7.13.3 KT Transcriptional regulator
LNIPHOMF_03448 4e-34 yqzF S Protein of unknown function (DUF2627)
LNIPHOMF_03449 3.3e-118 prpB 4.1.3.30 G Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
LNIPHOMF_03450 2.7e-182 yaaC S YaaC-like Protein
LNIPHOMF_03451 1.8e-273 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
LNIPHOMF_03452 5.2e-248 dacA 3.4.16.4 M Belongs to the peptidase S11 family
LNIPHOMF_03453 2.2e-157 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
LNIPHOMF_03454 8e-108 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
LNIPHOMF_03455 4.3e-207 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LNIPHOMF_03456 1.3e-09
LNIPHOMF_03457 2.2e-122 dck 2.7.1.113, 2.7.1.74, 2.7.1.76 F Deoxycytidine kinase
LNIPHOMF_03458 3.2e-115 dgk 2.7.1.113, 2.7.1.74, 2.7.1.76 F Deoxyguanosine kinase
LNIPHOMF_03459 5.6e-215 yaaH M Glycoside Hydrolase Family
LNIPHOMF_03460 2.4e-98 yaaI Q COG1335 Amidases related to nicotinamidase
LNIPHOMF_03461 1e-84 tadA 3.5.4.1, 3.5.4.3, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
LNIPHOMF_03462 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LNIPHOMF_03463 5.3e-37 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LNIPHOMF_03464 3.9e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LNIPHOMF_03465 7.9e-32 yaaL S Protein of unknown function (DUF2508)
LNIPHOMF_03466 3.7e-36 bofA S Sigma-K factor-processing regulatory protein BofA
LNIPHOMF_03467 5.2e-50 S LrgA family
LNIPHOMF_03468 2.6e-118 yxaC M effector of murein hydrolase
LNIPHOMF_03469 1.3e-193 yxaB GM Polysaccharide pyruvyl transferase
LNIPHOMF_03470 7e-209 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
LNIPHOMF_03471 7.3e-127 gntR K transcriptional
LNIPHOMF_03472 4.6e-304 gntK 2.7.1.12, 2.7.1.17, 2.7.1.5 G Belongs to the FGGY kinase family
LNIPHOMF_03473 4.5e-231 gntP EG COG2610 H gluconate symporter and related permeases
LNIPHOMF_03474 3.8e-273 gnd 1.1.1.343, 1.1.1.44 G Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LNIPHOMF_03475 2.1e-105 ahpC 1.11.1.15 O Alkyl hydroperoxide reductase
LNIPHOMF_03476 3.8e-287 ahpF O Alkyl hydroperoxide reductase
LNIPHOMF_03477 6.4e-292 bglA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LNIPHOMF_03478 2.3e-34 2.7.1.199 G phosphoenolpyruvate-dependent sugar phosphotransferase system
LNIPHOMF_03479 1.3e-128 yydK K Transcriptional regulator
LNIPHOMF_03480 7.6e-13
LNIPHOMF_03481 3.3e-119 S ABC-2 family transporter protein
LNIPHOMF_03482 4.3e-90 thiT S Thiamine transporter protein (Thia_YuaJ)
LNIPHOMF_03483 3.4e-94 M1-753 M FR47-like protein
LNIPHOMF_03484 4.1e-188 yuaG 3.4.21.72 S protein conserved in bacteria
LNIPHOMF_03485 1.4e-77 yuaF OU Membrane protein implicated in regulation of membrane protease activity
LNIPHOMF_03486 3.9e-84 yuaE S DinB superfamily
LNIPHOMF_03487 7.9e-108 yuaD
LNIPHOMF_03488 2.9e-229 gbsB 1.1.1.1 C alcohol dehydrogenase
LNIPHOMF_03489 8e-282 gbsA 1.2.1.8 C Belongs to the aldehyde dehydrogenase family
LNIPHOMF_03490 1.1e-95 yuaC K Belongs to the GbsR family
LNIPHOMF_03491 2.2e-91 yuaB
LNIPHOMF_03492 5e-122 ktrA P COG0569 K transport systems, NAD-binding component
LNIPHOMF_03493 5.4e-237 ktrB P Potassium
LNIPHOMF_03494 1e-38 yiaA S yiaA/B two helix domain
LNIPHOMF_03495 6.4e-153 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
LNIPHOMF_03496 6.2e-277 yubD P Major Facilitator Superfamily
LNIPHOMF_03498 9.8e-49 ywcB S Protein of unknown function, DUF485
LNIPHOMF_03499 1.4e-268 ywcA S Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LNIPHOMF_03500 1.9e-112 ywbO Q dithiol-disulfide isomerase involved in polyketide biosynthesis
LNIPHOMF_03501 2.6e-225 ywbN P Dyp-type peroxidase family protein
LNIPHOMF_03502 2e-187 ycdO P periplasmic lipoprotein involved in iron transport
LNIPHOMF_03503 8.2e-255 P COG0672 High-affinity Fe2 Pb2 permease
LNIPHOMF_03504 4.1e-116 thiE 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
LNIPHOMF_03505 2.8e-143 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
LNIPHOMF_03506 4.3e-153 ywbI K Transcriptional regulator
LNIPHOMF_03507 6.5e-58 ywbH S Increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation. Inhibited by the antiholin-like proteins LrgAB. In an unstressed cell, the LrgAB products probably inhibit the function of the CidA protein. When a cell is stressed by the addition of antibiotics or by other factors in the environment, CidA possibly oligomerizes within the bacterial cell membrane, creating lesions that disrupt the proton motive force, which in turn results in loss of cell viability. These lesions are also hypothesized to regulate the subsequent cell lysis by either allowing the murein hydrolases access to the cell wall substrate and or regulating their activity by a
LNIPHOMF_03508 2.3e-111 ywbG M effector of murein hydrolase
LNIPHOMF_03509 1.9e-209 ywbF EGP Major facilitator Superfamily
LNIPHOMF_03510 1.2e-28 ywbE S Uncharacterized conserved protein (DUF2196)
LNIPHOMF_03511 8.9e-223 ywbD 2.1.1.191 J Methyltransferase
LNIPHOMF_03512 4.4e-67 ywbC 4.4.1.5 E glyoxalase
LNIPHOMF_03513 6.3e-117 atpB C it plays a direct role in the translocation of protons across the membrane
LNIPHOMF_03514 1.6e-26 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LNIPHOMF_03515 3.8e-45 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LNIPHOMF_03516 1.1e-90 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LNIPHOMF_03517 6.9e-281 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LNIPHOMF_03518 1.1e-150 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LNIPHOMF_03519 1.2e-266 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LNIPHOMF_03520 5.9e-54 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
LNIPHOMF_03521 4.3e-88 ywmA
LNIPHOMF_03522 1.3e-32 ywzB S membrane
LNIPHOMF_03523 1.6e-134 ywmB S TATA-box binding
LNIPHOMF_03524 1.2e-241 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LNIPHOMF_03525 2e-178 spoIID D Stage II sporulation protein D
LNIPHOMF_03526 1.7e-122 ywmC S protein containing a von Willebrand factor type A (vWA) domain
LNIPHOMF_03527 7.2e-121 ywmD S protein containing a von Willebrand factor type A (vWA) domain
LNIPHOMF_03529 2.6e-146 fdhD C Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LNIPHOMF_03530 7e-192 moaA 4.1.99.22, 4.6.1.17 H Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LNIPHOMF_03531 1.3e-103 S response regulator aspartate phosphatase
LNIPHOMF_03532 3e-84 ywmF S Peptidase M50
LNIPHOMF_03533 3.8e-11 csbD K CsbD-like
LNIPHOMF_03535 6.3e-51 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
LNIPHOMF_03536 5.9e-64 ureB 3.5.1.5 E Belongs to the urease beta subunit family
LNIPHOMF_03537 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
LNIPHOMF_03538 1.7e-64 ywnA K Transcriptional regulator
LNIPHOMF_03539 1.6e-114 ywnB S NAD(P)H-binding
LNIPHOMF_03540 2.6e-59 ywnC S Family of unknown function (DUF5362)
LNIPHOMF_03541 4.1e-144 mta K transcriptional
LNIPHOMF_03542 1.2e-277 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LNIPHOMF_03543 2.2e-70 ywnF S Family of unknown function (DUF5392)
LNIPHOMF_03544 2.7e-14 ywnC S Family of unknown function (DUF5362)
LNIPHOMF_03545 6.4e-90 ywnH 2.3.1.183 M COG1247 Sortase and related acyltransferases
LNIPHOMF_03546 5.5e-126 spoIIQ M COG0739 Membrane proteins related to metalloendopeptidases
LNIPHOMF_03547 3.5e-73 ywnJ S VanZ like family
LNIPHOMF_03548 3.4e-103 bcrC 3.6.1.27 I COG0671 Membrane-associated phospholipid phosphatase
LNIPHOMF_03549 1.6e-58 nrgB K Belongs to the P(II) protein family
LNIPHOMF_03550 2.5e-225 amt P Ammonium transporter
LNIPHOMF_03551 1.2e-77
LNIPHOMF_03552 4e-104 phzA Q Isochorismatase family
LNIPHOMF_03553 4.4e-242 ywoD EGP Major facilitator superfamily
LNIPHOMF_03554 3e-281 ybbW FH COG1953 Cytosine uracil thiamine allantoin permeases
LNIPHOMF_03555 1.2e-231 ywoF P Right handed beta helix region
LNIPHOMF_03556 2.7e-211 ywoG EGP Major facilitator Superfamily
LNIPHOMF_03557 2.1e-70 ywoH K COG1846 Transcriptional regulators
LNIPHOMF_03558 3e-44 spoIIID K Stage III sporulation protein D
LNIPHOMF_03559 3.5e-180 mbl D Rod shape-determining protein
LNIPHOMF_03560 6.9e-126 flhO N flagellar basal body
LNIPHOMF_03561 1.5e-141 flhP N flagellar basal body
LNIPHOMF_03562 2.1e-199 S aspartate phosphatase
LNIPHOMF_03563 4.6e-82 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
LNIPHOMF_03564 1.5e-54 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
LNIPHOMF_03565 1.4e-153 ywpD T Histidine kinase
LNIPHOMF_03566 8e-51 srtA 3.4.22.70 M Sortase family
LNIPHOMF_03567 1.1e-66 ywpF S YwpF-like protein
LNIPHOMF_03568 1.3e-66 ywpG
LNIPHOMF_03569 9.8e-58 ssbB L Single-stranded DNA-binding protein
LNIPHOMF_03570 8.8e-139 glcR K COG1349 Transcriptional regulators of sugar metabolism
LNIPHOMF_03571 3.6e-157 ywpJ 3.1.3.104 S hydrolases of the HAD superfamily
LNIPHOMF_03572 0.0 ywqA L COG0553 Superfamily II DNA RNA helicases, SNF2 family
LNIPHOMF_03573 3.8e-309 ywqB S SWIM zinc finger
LNIPHOMF_03574 1.2e-17
LNIPHOMF_03575 2e-116 ywqC M biosynthesis protein
LNIPHOMF_03576 1.1e-119 ywqD 2.7.10.1 D COG0489 ATPases involved in chromosome partitioning
LNIPHOMF_03577 1.4e-141 ywqE 3.1.3.48 GM COG4464 Capsular polysaccharide biosynthesis protein
LNIPHOMF_03578 3e-248 ugd 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
LNIPHOMF_03579 3.4e-154 ywqG S Domain of unknown function (DUF1963)
LNIPHOMF_03580 3.3e-15 S Domain of unknown function (DUF5082)
LNIPHOMF_03581 1.3e-38 ywqI S Family of unknown function (DUF5344)
LNIPHOMF_03582 0.0 ywqJ L nucleic acid phosphodiester bond hydrolysis
LNIPHOMF_03583 1.7e-52 S MORN repeat variant
LNIPHOMF_03584 4.5e-137 nfi 3.1.21.7 L DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA
LNIPHOMF_03585 2.9e-162 K Transcriptional regulator
LNIPHOMF_03586 2.7e-102 ywqN S NAD(P)H-dependent
LNIPHOMF_03588 6.9e-90 ywrA P COG2059 Chromate transport protein ChrA
LNIPHOMF_03589 2.4e-104 ywrB P Chromate transporter
LNIPHOMF_03590 2.1e-82 ywrC K Transcriptional regulator
LNIPHOMF_03591 9.6e-310 ggt 2.3.2.2, 3.4.19.13 E gamma-glutamyltransferase
LNIPHOMF_03592 2.9e-54 S Domain of unknown function (DUF4181)
LNIPHOMF_03593 8.1e-111 ywrF S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LNIPHOMF_03594 3.7e-12
LNIPHOMF_03595 1.2e-210 cotH M Spore Coat
LNIPHOMF_03596 7.6e-131 cotB
LNIPHOMF_03597 7.5e-126 ywrJ
LNIPHOMF_03598 1.9e-220 ywrK P Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LNIPHOMF_03599 1.1e-169 alsR K LysR substrate binding domain
LNIPHOMF_03600 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
LNIPHOMF_03601 1.3e-145 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
LNIPHOMF_03602 1.5e-97 ywrO S NADPH-quinone reductase (modulator of drug activity B)
LNIPHOMF_03603 3.6e-48 ywsA S Protein of unknown function (DUF3892)
LNIPHOMF_03604 4.6e-94 batE T Sh3 type 3 domain protein
LNIPHOMF_03605 4.4e-161 rbsB G COG1879 ABC-type sugar transport system, periplasmic component
LNIPHOMF_03606 1.4e-154 rbsC G Belongs to the binding-protein-dependent transport system permease family
LNIPHOMF_03607 2.3e-276 rbsA 3.6.3.17 G Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system
LNIPHOMF_03608 2.8e-64 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
LNIPHOMF_03609 2.9e-162 rbsK 2.7.1.15, 2.7.1.4 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LNIPHOMF_03610 1.9e-178 rbsR K transcriptional
LNIPHOMF_03611 6.1e-224 murD 6.3.2.9 M COG0769 UDP-N-acetylmuramyl tripeptide synthase
LNIPHOMF_03612 8.6e-70 pgsC S biosynthesis protein
LNIPHOMF_03613 1.7e-218 capA M enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
LNIPHOMF_03614 3.6e-21 ywtC
LNIPHOMF_03615 5.4e-240 pgdS CBM50 M COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
LNIPHOMF_03616 7e-161 ywtE 3.1.3.104 S hydrolases of the HAD superfamily
LNIPHOMF_03617 8.4e-171 ywtF K Transcriptional regulator
LNIPHOMF_03618 1.9e-248 ywtG EGP Major facilitator Superfamily
LNIPHOMF_03619 7.6e-216 gerAC S Spore germination protein
LNIPHOMF_03620 7.5e-200 gerBB E Spore germination protein
LNIPHOMF_03621 3.5e-266 gerBA EG Spore germination protein
LNIPHOMF_03622 7.1e-191 pmi 5.3.1.8 G mannose-6-phosphate isomerase
LNIPHOMF_03623 4.1e-52 atl 3.2.1.96, 3.5.1.28 GH73 G Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
LNIPHOMF_03624 2.1e-185 atl 3.2.1.96, 3.5.1.28 GH73 G Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
LNIPHOMF_03626 2.7e-143 spo0M S COG4326 Sporulation control protein
LNIPHOMF_03627 3e-27
LNIPHOMF_03628 5.9e-134 pepE 3.4.11.2, 3.4.13.21 E Belongs to the peptidase S51 family
LNIPHOMF_03629 0.0 thiC 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
LNIPHOMF_03630 1.9e-266 ygaK C Berberine and berberine like
LNIPHOMF_03632 3.2e-291 katA 1.11.1.6 P serves to protect cells from the toxic effects of hydrogen peroxide
LNIPHOMF_03633 1.1e-145 ssuB P COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component
LNIPHOMF_03634 1.7e-171 ssuA M Sulfonate ABC transporter
LNIPHOMF_03635 1.5e-147 ssuC P COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
LNIPHOMF_03636 3.1e-217 ssuD 1.14.14.5 C Catalyzes the desulfonation of aliphatic sulfonates
LNIPHOMF_03638 6e-42 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LNIPHOMF_03639 4.1e-78 ygaO
LNIPHOMF_03640 4.4e-29 K Transcriptional regulator
LNIPHOMF_03645 1.9e-168 S Calcineurin-like phosphoesterase
LNIPHOMF_03646 2.5e-30 sspB S spore protein
LNIPHOMF_03651 8.9e-83 yosT L Bacterial transcription activator, effector binding domain
LNIPHOMF_03652 2.4e-77 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F Deoxyuridine 5'-triphosphate
LNIPHOMF_03653 6.1e-38 O Glutaredoxin
LNIPHOMF_03654 2.8e-66 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LNIPHOMF_03655 3.3e-97 L HNH endonuclease
LNIPHOMF_03656 1e-107 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LNIPHOMF_03657 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LNIPHOMF_03658 2.3e-117 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LNIPHOMF_03659 5.1e-66 nrdI 1.17.4.1 F Probably involved in ribonucleotide reductase function
LNIPHOMF_03666 1.6e-82 smpB O Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
LNIPHOMF_03667 0.0 rnr K 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
LNIPHOMF_03668 5.6e-143 est 3.1.1.1 S Carboxylesterase
LNIPHOMF_03669 2.4e-23 secG U Preprotein translocase subunit SecG
LNIPHOMF_03670 3.7e-153 yvaM S Serine aminopeptidase, S33
LNIPHOMF_03671 7.5e-36 yvzC K Transcriptional
LNIPHOMF_03672 4e-69 K transcriptional
LNIPHOMF_03673 8e-70 yvaO K Cro/C1-type HTH DNA-binding domain
LNIPHOMF_03674 2.2e-54 yodB K transcriptional
LNIPHOMF_03675 4.2e-226 NT chemotaxis protein
LNIPHOMF_03676 8.1e-112 opuCD P COG1174 ABC-type proline glycine betaine transport systems, permease component
LNIPHOMF_03677 1.1e-172 opuCC M COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
LNIPHOMF_03678 2.5e-110 opuCB P COG1174 ABC-type proline glycine betaine transport systems, permease component
LNIPHOMF_03679 3e-212 opuCA 3.6.3.32 E COG1125 ABC-type proline glycine betaine transport systems, ATPase components
LNIPHOMF_03680 4.6e-48 spoVG D Essential for sporulation. Interferes with or is a negative regulator of the pathway leading to asymmetric septation
LNIPHOMF_03681 3.8e-63 yabJ 3.5.99.10 J translation initiation inhibitor, yjgF family
LNIPHOMF_03682 2.6e-152 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
LNIPHOMF_03683 4.1e-161 ispE 2.1.1.182, 2.7.1.148 I Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
LNIPHOMF_03684 8.3e-27 sspF S DNA topological change
LNIPHOMF_03685 7.8e-39 veg S protein conserved in bacteria
LNIPHOMF_03686 3.3e-137 yabG S peptidase
LNIPHOMF_03687 2.4e-156 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
LNIPHOMF_03688 8.4e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LNIPHOMF_03689 4.3e-194 rpfB GH23 T protein conserved in bacteria
LNIPHOMF_03690 1.8e-144 tatD L hydrolase, TatD
LNIPHOMF_03691 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LNIPHOMF_03692 4.4e-233 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LNIPHOMF_03693 8.1e-88 ywaE K Transcriptional regulator
LNIPHOMF_03694 1.7e-128 ywaF S Integral membrane protein
LNIPHOMF_03695 7e-169 gspA M General stress
LNIPHOMF_03696 4e-153 sacY K transcriptional antiterminator
LNIPHOMF_03697 5.2e-243 scrA 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
LNIPHOMF_03698 1.6e-277 epr 3.4.21.62 O Belongs to the peptidase S8 family
LNIPHOMF_03699 5.8e-247 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LNIPHOMF_03700 5.9e-238
LNIPHOMF_03702 4e-17
LNIPHOMF_03703 5.7e-55 bldD K domain, Protein
LNIPHOMF_03706 0.0
LNIPHOMF_03707 1.8e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
LNIPHOMF_03709 2.6e-230
LNIPHOMF_03711 1.7e-107 yyaP 1.5.1.3 H RibD C-terminal domain
LNIPHOMF_03712 5.4e-67 yyaQ S YjbR
LNIPHOMF_03713 5.4e-100 yyaR K Acetyltransferase (GNAT) domain
LNIPHOMF_03714 1.5e-101 yyaS S Membrane
LNIPHOMF_03715 5.9e-79 yjcF S Acetyltransferase (GNAT) domain
LNIPHOMF_03716 5.6e-77 yybA 2.3.1.57 K transcriptional
LNIPHOMF_03717 3e-127 S Metallo-beta-lactamase superfamily
LNIPHOMF_03718 2.7e-77 yybC
LNIPHOMF_03719 2e-79 yjcF S Acetyltransferase (GNAT) domain
LNIPHOMF_03720 2.1e-165 yybE K Transcriptional regulator
LNIPHOMF_03721 3.2e-220 ynfM EGP Major facilitator Superfamily
LNIPHOMF_03722 3e-124 yybG S Pentapeptide repeat-containing protein
LNIPHOMF_03723 5.9e-67 yybH S SnoaL-like domain
LNIPHOMF_03724 6.2e-132
LNIPHOMF_03725 2.6e-115 V ATPases associated with a variety of cellular activities
LNIPHOMF_03726 9.2e-161 spoIVFB S Stage IV sporulation protein
LNIPHOMF_03727 3.8e-145 spoIVFA M COG0739 Membrane proteins related to metalloendopeptidases
LNIPHOMF_03728 2.5e-144 minD D Belongs to the ParA family
LNIPHOMF_03729 1.4e-108 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
LNIPHOMF_03730 1.4e-84 mreD M shape-determining protein
LNIPHOMF_03731 2.8e-157 mreC M Involved in formation and maintenance of cell shape
LNIPHOMF_03732 1.8e-184 mreB D Rod shape-determining protein MreB
LNIPHOMF_03733 5.9e-126 radC E Belongs to the UPF0758 family
LNIPHOMF_03734 2.8e-102 maf D septum formation protein Maf
LNIPHOMF_03735 1.1e-168 spoIIB S Sporulation related domain
LNIPHOMF_03736 6.6e-85 comC 3.4.23.43 NOU COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases
LNIPHOMF_03737 4.3e-247 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
LNIPHOMF_03738 3.9e-34 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
LNIPHOMF_03739 2.9e-47 ydeH
LNIPHOMF_03740 3.4e-220 ydeG EGP Major facilitator superfamily
LNIPHOMF_03741 2.2e-265 K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
LNIPHOMF_03742 2.5e-166 ydeE K AraC family transcriptional regulator
LNIPHOMF_03743 2.3e-173 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
LNIPHOMF_03744 1.1e-166 rhaS5 K AraC-like ligand binding domain
LNIPHOMF_03745 4.6e-35 ydzE EG spore germination
LNIPHOMF_03746 6.1e-79 carD K Transcription factor
LNIPHOMF_03747 8.7e-30 cspL K Cold shock
LNIPHOMF_03748 1.4e-112 ydeA 1.11.1.6, 3.5.1.124 S DJ-1/PfpI family
LNIPHOMF_03750 8.8e-44 abrB K COG2002 Regulators of stationary sporulation gene expression
LNIPHOMF_03751 4.3e-158 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LNIPHOMF_03752 1.5e-49 yazA L endonuclease containing a URI domain
LNIPHOMF_03753 2.5e-138 yabB 2.1.1.223 S Conserved hypothetical protein 95
LNIPHOMF_03754 4.8e-31 yabA L Involved in initiation control of chromosome replication
LNIPHOMF_03755 2.1e-146 yaaT S stage 0 sporulation protein
LNIPHOMF_03756 2.2e-182 holB 2.7.7.7 L DNA polymerase III
LNIPHOMF_03757 1.5e-71 yaaR S protein conserved in bacteria
LNIPHOMF_03758 2.2e-54 yaaQ S protein conserved in bacteria
LNIPHOMF_03759 3.6e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LNIPHOMF_03760 1.1e-275 adiA 4.1.1.17, 4.1.1.18, 4.1.1.19 E Orn Lys Arg decarboxylase
LNIPHOMF_03761 4.5e-203 yaaN P Belongs to the TelA family
LNIPHOMF_03762 4.7e-103 xpaC S 5-bromo-4-chloroindolyl phosphate hydrolysis protein
LNIPHOMF_03763 3.4e-31 csfB S Inhibitor of sigma-G Gin
LNIPHOMF_03764 3e-173 hemC 2.1.1.107, 2.5.1.61, 4.2.1.75 H Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps
LNIPHOMF_03765 3.6e-146 hemX O cytochrome C
LNIPHOMF_03766 3.5e-247 hemA 1.2.1.70 H Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
LNIPHOMF_03767 1.4e-89 ysxD
LNIPHOMF_03768 1.2e-106 engB D Necessary for normal cell division and for the maintenance of normal septation
LNIPHOMF_03769 0.0 lon 3.4.21.53 O ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
LNIPHOMF_03770 2.3e-311 lonB 2.7.7.7, 3.4.21.53 LO Belongs to the peptidase S16 family
LNIPHOMF_03771 3.4e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LNIPHOMF_03772 8.3e-227 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
LNIPHOMF_03773 2.3e-187 ysoA H Tetratricopeptide repeat
LNIPHOMF_03774 8.1e-116 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LNIPHOMF_03775 1.7e-276 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LNIPHOMF_03776 3.3e-200 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
LNIPHOMF_03777 4e-292 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LNIPHOMF_03778 3.1e-192 ilvC 1.1.1.86 EH Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LNIPHOMF_03779 3.2e-84 ilvN 2.2.1.6 E Acetolactate synthase
LNIPHOMF_03780 0.0 ilvB 2.2.1.6 E Acetolactate synthase
LNIPHOMF_03782 7.6e-82 ysnE K acetyltransferase
LNIPHOMF_03783 9.1e-134 ysnF S protein conserved in bacteria
LNIPHOMF_03785 1.4e-92 ysnB S Phosphoesterase
LNIPHOMF_03786 4.5e-103 rdgB 3.6.1.66 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LNIPHOMF_03787 1.8e-133 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
LNIPHOMF_03788 2.9e-196 gerM S COG5401 Spore germination protein
LNIPHOMF_03789 2.1e-154 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
LNIPHOMF_03790 2.3e-75 ysmB 2.4.2.28 K helix_turn_helix multiple antibiotic resistance protein
LNIPHOMF_03791 3.3e-30 gerE K Transcriptional regulator
LNIPHOMF_03792 7.7e-79 ybgC 3.1.2.23, 3.1.2.28 S thioesterase
LNIPHOMF_03793 4.6e-148 sdhB 1.3.5.1, 1.3.5.4 C succinate dehydrogenase
LNIPHOMF_03794 0.0 sdhA 1.3.5.1, 1.3.5.4 C succinate dehydrogenase
LNIPHOMF_03795 2.4e-107 sdhC C succinate dehydrogenase
LNIPHOMF_03796 1.2e-79 yslB S Protein of unknown function (DUF2507)
LNIPHOMF_03797 1.3e-216 lysC 1.1.1.3, 2.7.2.4 E Belongs to the aspartokinase family
LNIPHOMF_03798 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
LNIPHOMF_03799 2e-52 trxA O Belongs to the thioredoxin family
LNIPHOMF_03800 4e-305 xsa 3.2.1.55 GH51 G Alpha-L-arabinofuranosidase C-terminus
LNIPHOMF_03802 4.2e-178 etfA C Electron transfer flavoprotein
LNIPHOMF_03803 1.2e-135 etfB C Electron transfer flavoprotein
LNIPHOMF_03804 3.1e-136 fadB 4.2.1.17 I Belongs to the enoyl-CoA hydratase isomerase family
LNIPHOMF_03805 2.7e-100 fadR K Transcriptional regulator
LNIPHOMF_03806 0.0 lcfA 6.2.1.3 IQ COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
LNIPHOMF_03807 7.3e-68 yshE S membrane
LNIPHOMF_03808 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
LNIPHOMF_03809 0.0 polX L COG1796 DNA polymerase IV (family X)
LNIPHOMF_03810 1.3e-85 cvpA S membrane protein, required for colicin V production
LNIPHOMF_03811 2.4e-40 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
LNIPHOMF_03812 4e-170 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LNIPHOMF_03813 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LNIPHOMF_03814 2.8e-196 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LNIPHOMF_03815 3.1e-133 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LNIPHOMF_03816 2.6e-32 sspI S Belongs to the SspI family
LNIPHOMF_03817 4.4e-208 ysfB KT regulator
LNIPHOMF_03818 7.2e-264 glcD 1.1.3.15 C Glycolate oxidase subunit
LNIPHOMF_03819 5.6e-258 glcF C Glycolate oxidase
LNIPHOMF_03820 3.6e-38 ysfE 4.4.1.5 E lactoylglutathione lyase activity
LNIPHOMF_03822 0.0 cstA T Carbon starvation protein
LNIPHOMF_03823 4.6e-301 abfA 3.2.1.55 GH51 G alpha-L-arabinofuranosidase activity
LNIPHOMF_03824 3.4e-144 araQ G transport system permease
LNIPHOMF_03825 1.4e-167 araP G carbohydrate transport
LNIPHOMF_03826 2.8e-254 araN G carbohydrate transport
LNIPHOMF_03827 5e-226 egsA 1.1.1.261 I Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species
LNIPHOMF_03828 4.1e-147 araL 3.1.3.41 G Haloacid dehalogenase-like hydrolase
LNIPHOMF_03829 8.4e-133 araD 4.1.2.17, 4.2.1.109, 5.1.3.4 G COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
LNIPHOMF_03830 0.0 araB 2.7.1.16 C Belongs to the ribulokinase family
LNIPHOMF_03831 1.9e-294 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
LNIPHOMF_03832 2.1e-190 abnA 3.2.1.99 GH43 G Belongs to the glycosyl hydrolase 43 family
LNIPHOMF_03833 4.5e-205 ysdC G COG1363 Cellulase M and related proteins
LNIPHOMF_03834 9.2e-68 ysdB S Sigma-w pathway protein YsdB
LNIPHOMF_03835 7.5e-45 ysdA S Membrane
LNIPHOMF_03836 3.6e-58 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LNIPHOMF_03837 9e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
LNIPHOMF_03838 3.3e-86 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LNIPHOMF_03840 2.4e-111 lrgB M Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgA, with the holin-like protein CidA. The LrgAB and CidA proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses
LNIPHOMF_03841 2.2e-49 lrgA S Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgB, with the holin-like protein CidA. The LrgAB and CidA proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses
LNIPHOMF_03842 6.3e-131 lytT T COG3279 Response regulator of the LytR AlgR family
LNIPHOMF_03843 0.0 lytS 2.7.13.3 T Histidine kinase
LNIPHOMF_03844 1.5e-149 ysaA S HAD-hyrolase-like
LNIPHOMF_03845 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LNIPHOMF_03846 3.8e-159 ytxC S YtxC-like family
LNIPHOMF_03847 4.9e-111 ytxB S SNARE associated Golgi protein
LNIPHOMF_03848 3e-173 dnaI L Primosomal protein DnaI
LNIPHOMF_03849 3.5e-266 dnaB L Membrane attachment protein
LNIPHOMF_03850 1.1e-80 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LNIPHOMF_03851 2e-67 speH 4.1.1.50 E Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
LNIPHOMF_03852 2.8e-193 gapB 1.2.1.12, 1.2.1.59 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
LNIPHOMF_03853 9.9e-67 ytcD K Transcriptional regulator
LNIPHOMF_03854 4.9e-205 ytbD EGP Major facilitator Superfamily
LNIPHOMF_03855 8.9e-161 ytbE S reductase
LNIPHOMF_03856 7.6e-98 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LNIPHOMF_03857 1.1e-107 ytaF P Probably functions as a manganese efflux pump
LNIPHOMF_03858 2e-157 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
LNIPHOMF_03859 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LNIPHOMF_03860 1.9e-203 phoR 2.7.13.3 T Signal transduction histidine kinase
LNIPHOMF_03861 4e-264 xylA 5.3.1.5 G Belongs to the xylose isomerase family
LNIPHOMF_03862 6e-293 xylB 2.7.1.12, 2.7.1.17, 2.7.1.5 G xylulose kinase
LNIPHOMF_03863 1.4e-113 yokF 3.1.31.1 L RNA catabolic process
LNIPHOMF_03864 3.5e-247 iolT EGP Major facilitator Superfamily
LNIPHOMF_03865 2.7e-219 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LNIPHOMF_03866 6.3e-84 yncE S Protein of unknown function (DUF2691)
LNIPHOMF_03867 4.9e-78 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F Deoxyuridine 5'-triphosphate
LNIPHOMF_03868 1.2e-14
LNIPHOMF_03869 2.7e-137 pksI I Belongs to the enoyl-CoA hydratase isomerase family
LNIPHOMF_03870 2.6e-143 pksH 4.2.1.18 I enoyl-CoA hydratase
LNIPHOMF_03871 1.3e-245 pksG 2.3.3.10 I synthase
LNIPHOMF_03872 2.7e-238 pksF 2.3.1.179, 2.3.1.41 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
LNIPHOMF_03873 1.4e-37 acpK IQ Phosphopantetheine attachment site
LNIPHOMF_03874 0.0 fabD 1.13.12.16, 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
LNIPHOMF_03875 1.6e-25
LNIPHOMF_03876 1.6e-199 ysxE S A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LNIPHOMF_03877 1.9e-226 spoVID M stage VI sporulation protein D
LNIPHOMF_03878 4.6e-249 hemL 5.4.3.8 H Glutamate-1-semialdehyde aminotransferase
LNIPHOMF_03879 5.6e-183 hemB 4.2.1.24 H Belongs to the ALAD family
LNIPHOMF_03880 3.3e-42 hemD 2.1.1.107, 4.2.1.75 H Uroporphyrinogen-III synthase
LNIPHOMF_03882 1.1e-22 yuzC
LNIPHOMF_03883 2.2e-232 yuxH 3.1.4.52 T signal transduction protein containing EAL and modified HD-GYP domains
LNIPHOMF_03884 3.6e-266 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LNIPHOMF_03885 2.9e-104 pncA Q COG1335 Amidases related to nicotinamidase
LNIPHOMF_03886 1.6e-67 yueI S Protein of unknown function (DUF1694)
LNIPHOMF_03887 7.4e-39 yueH S YueH-like protein
LNIPHOMF_03888 2.1e-32 yueG S Spore germination protein gerPA/gerPF
LNIPHOMF_03889 1.9e-190 yueF S transporter activity
LNIPHOMF_03890 6.1e-72 S Protein of unknown function (DUF2283)
LNIPHOMF_03891 2.9e-24 S Protein of unknown function (DUF2642)
LNIPHOMF_03892 1.2e-260
LNIPHOMF_03893 5e-215 tagB 2.7.8.14, 2.7.8.44, 2.7.8.47 M glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
LNIPHOMF_03894 1.8e-144 tagA 2.4.1.187 GT26 M Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
LNIPHOMF_03895 5.7e-70 tagD 2.7.7.15, 2.7.7.39 IM Cytidylyltransferase
LNIPHOMF_03896 0.0 tagE 2.4.1.52 GT4 M Glycosyl transferase 1 domain A
LNIPHOMF_03897 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LNIPHOMF_03898 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LNIPHOMF_03899 1.8e-37 yaaB S Domain of unknown function (DUF370)
LNIPHOMF_03900 1.4e-206 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LNIPHOMF_03901 2.4e-33 yaaA S S4 domain
LNIPHOMF_03902 6.1e-205 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
LNIPHOMF_03903 1.1e-56 K sequence-specific DNA binding
LNIPHOMF_03904 6.5e-37 K Helix-turn-helix XRE-family like proteins
LNIPHOMF_03906 1.2e-103
LNIPHOMF_03910 1.5e-180 yqaJ L YqaJ-like viral recombinase domain
LNIPHOMF_03911 2.5e-155 recT L RecT family
LNIPHOMF_03912 4.7e-123 3.1.3.16 L DnaD domain protein
LNIPHOMF_03913 5.9e-168 xkdC L IstB-like ATP binding protein
LNIPHOMF_03915 7.2e-74 rusA L Endodeoxyribonuclease RusA
LNIPHOMF_03916 2.1e-31 yqaO S Phage-like element PBSX protein XtrA
LNIPHOMF_03917 1.4e-72
LNIPHOMF_03918 3.6e-140 opuCA 3.6.3.32 E COG1125 ABC-type proline glycine betaine transport systems, ATPase components
LNIPHOMF_03919 4.5e-112 opuCB P COG1174 ABC-type proline glycine betaine transport systems, permease component
LNIPHOMF_03920 2.5e-172 opuCC M COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
LNIPHOMF_03921 8.7e-114 opuCD P COG1174 ABC-type proline glycine betaine transport systems, permease component
LNIPHOMF_03922 4.5e-45 sdpR K transcriptional
LNIPHOMF_03923 3.3e-96 sdpI S Immunity protein that provides protection for the cell against the toxic effects of SDP, its own SdpC-derived killing factor, and that functions as a receptor signal transduction protein as well. Once SDP accumulates in the extracellular milieu, SdpI binds to SDP, causing sequestration of SdpR at the bacterial membrane
LNIPHOMF_03924 4.4e-08
LNIPHOMF_03925 7.6e-172
LNIPHOMF_03926 7.9e-13 S Sporulation delaying protein SdpA
LNIPHOMF_03927 8.7e-61 yvbF K Belongs to the GbsR family
LNIPHOMF_03928 2.3e-290 ybeC E amino acid
LNIPHOMF_03929 5.6e-166 glpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
LNIPHOMF_03930 7.3e-258 glpT G -transporter
LNIPHOMF_03931 2.9e-35 S Protein of unknown function (DUF2651)
LNIPHOMF_03932 1.6e-171 ybfA 3.4.15.5 K FR47-like protein
LNIPHOMF_03933 2.2e-224 ybfB G COG0477 Permeases of the major facilitator superfamily
LNIPHOMF_03934 7e-46 pucF 3.5.1.6, 3.5.1.87, 3.5.3.9 E COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases
LNIPHOMF_03935 1.9e-239 pucG 2.6.1.112, 2.6.1.44, 2.6.1.45, 2.6.1.51 E COG0075 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase
LNIPHOMF_03937 1.7e-190 pucA 1.17.1.4 O COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
LNIPHOMF_03938 3.6e-111 pucB 1.1.1.328, 1.17.1.4, 2.7.7.76 S MobA-like NTP transferase domain
LNIPHOMF_03939 3.4e-152 ygfM 1.17.1.4, 1.2.5.3 C COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM homologs
LNIPHOMF_03940 0.0 xdhA 1.17.1.4 C COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs
LNIPHOMF_03941 7.9e-99 1.17.1.4, 1.2.5.3, 1.3.99.16 C COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs
LNIPHOMF_03942 1.3e-298 gpmI 5.4.2.12 G Catalyzes the interconversion of 2-phosphoglycerate and
LNIPHOMF_03943 4.3e-138 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
LNIPHOMF_03944 1e-218 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
LNIPHOMF_03945 6.2e-185 gapA 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
LNIPHOMF_03946 6.3e-185 cggR K COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
LNIPHOMF_03947 1.6e-252 araE EGP Major facilitator Superfamily
LNIPHOMF_03948 5.5e-203 araR K transcriptional
LNIPHOMF_03949 1.5e-191 yvbT C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LNIPHOMF_03950 3.9e-159 yvbU K Transcriptional regulator
LNIPHOMF_03951 8.5e-157 yvbV EG EamA-like transporter family
LNIPHOMF_03952 2.8e-241 yvbW E COG1113 Gamma-aminobutyrate permease and related permeases
LNIPHOMF_03953 4.3e-197 yvbX S Glycosyl hydrolase
LNIPHOMF_03954 2.3e-133 lutC S Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
LNIPHOMF_03955 1.2e-274 lutB C Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate
LNIPHOMF_03956 1.5e-137 lutA C Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
LNIPHOMF_03957 2.6e-106 desR T COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
LNIPHOMF_03958 8.9e-201 desK 2.7.13.3 T Histidine kinase
LNIPHOMF_03959 6.2e-134 yvfS V COG0842 ABC-type multidrug transport system, permease component
LNIPHOMF_03960 3e-162 yvfR V COG1131 ABC-type multidrug transport system, ATPase component
LNIPHOMF_03961 2.6e-157 rsbQ S Alpha/beta hydrolase family
LNIPHOMF_03962 1.4e-199 rsbU 3.1.3.3 T response regulator
LNIPHOMF_03963 2.6e-252 galA 3.2.1.89 G arabinogalactan
LNIPHOMF_03964 0.0 lacA 3.2.1.23 G beta-galactosidase
LNIPHOMF_03965 3.2e-150 ganQ P transport
LNIPHOMF_03966 1.3e-232 malC P COG1175 ABC-type sugar transport systems, permease components
LNIPHOMF_03967 2.9e-232 cycB G COG2182 Maltose-binding periplasmic proteins domains
LNIPHOMF_03968 1.8e-184 lacR K Transcriptional regulator
LNIPHOMF_03969 1e-112 yvfI K COG2186 Transcriptional regulators
LNIPHOMF_03970 1.4e-309 yvfH C L-lactate permease
LNIPHOMF_03971 6.5e-243 rpoN K COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog
LNIPHOMF_03972 1e-31 yvfG S YvfG protein
LNIPHOMF_03973 5.8e-188 yvfF GM Exopolysaccharide biosynthesis protein
LNIPHOMF_03974 1.2e-224 epsN 2.6.1.102 E Belongs to the DegT DnrJ EryC1 family
LNIPHOMF_03975 2.2e-58 epsM GM COG0110 Acetyltransferase (isoleucine patch superfamily)
LNIPHOMF_03976 2.6e-109 epsL M COG2148 Sugar transferases involved in lipopolysaccharide synthesis
LNIPHOMF_03977 8.9e-260 pglK S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
LNIPHOMF_03978 1.9e-197 epsJ GT2 S COG0463 Glycosyltransferases involved in cell wall biogenesis
LNIPHOMF_03979 3.6e-207 epsI GM pyruvyl transferase
LNIPHOMF_03980 3.6e-196 epsH GT2 S Glycosyltransferase like family 2
LNIPHOMF_03981 4.8e-207 epsG S EpsG family
LNIPHOMF_03982 5.3e-220 epsF GT4 M Glycosyl transferases group 1
LNIPHOMF_03983 4.1e-158 epsE GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
LNIPHOMF_03984 2e-224 epsD GT4 M Glycosyl transferase 4-like
LNIPHOMF_03985 0.0 pglF 4.2.1.115, 4.2.1.135, 4.2.1.46 GM Polysaccharide biosynthesis protein
LNIPHOMF_03986 1e-114 epsB 2.7.10.2 D COG0489 ATPases involved in chromosome partitioning
LNIPHOMF_03987 4e-122 ywqC M biosynthesis protein
LNIPHOMF_03988 5.7e-77 slr K transcriptional
LNIPHOMF_03989 4.8e-287 pnbA CE10 I Belongs to the type-B carboxylesterase lipase family
LNIPHOMF_03991 4.6e-93 padC Q Phenolic acid decarboxylase
LNIPHOMF_03992 1.3e-48 MA20_18690 S Protein of unknown function (DUF3237)
LNIPHOMF_03993 3.1e-127 racX 5.1.1.13 M Belongs to the aspartate glutamate racemases family
LNIPHOMF_03994 9.6e-266 pbpE V Beta-lactamase
LNIPHOMF_03995 1.2e-274 sacB 2.4.1.10 GH68 M levansucrase activity
LNIPHOMF_03996 0.0 levB 3.2.1.26, 3.2.1.64, 3.2.1.65, 3.2.1.80 GH32 G Belongs to the glycosyl hydrolase 32 family
LNIPHOMF_03997 1.8e-295 yveA E amino acid
LNIPHOMF_03998 2.6e-106 yvdT K Transcriptional regulator
LNIPHOMF_03999 6.7e-51 ykkC P Small Multidrug Resistance protein
LNIPHOMF_04000 4.1e-50 sugE P Small Multidrug Resistance protein
LNIPHOMF_04001 2.2e-93 yvdQ S Protein of unknown function (DUF3231)
LNIPHOMF_04002 8.4e-270 ygaK C COG0277 FAD FMN-containing dehydrogenases
LNIPHOMF_04003 1.5e-183 S Patatin-like phospholipase
LNIPHOMF_04005 1.2e-103 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LNIPHOMF_04006 1.3e-122 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S Haloacid dehalogenase-like hydrolase
LNIPHOMF_04007 0.0 malL 3.2.1.10 GH13 G COG0366 Glycosidases
LNIPHOMF_04008 0.0 yvdK 2.4.1.8 GH65 G Glycoside hydrolase, family 65
LNIPHOMF_04009 1.2e-158 malA S Protein of unknown function (DUF1189)
LNIPHOMF_04010 7.8e-149 malD P transport
LNIPHOMF_04011 5.3e-245 malC P COG1175 ABC-type sugar transport systems, permease components
LNIPHOMF_04012 1.3e-235 mdxE G COG2182 Maltose-binding periplasmic proteins domains
LNIPHOMF_04013 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Alpha amylase, N-terminal ig-like domain
LNIPHOMF_04014 3.6e-174 yvdE K Transcriptional regulator
LNIPHOMF_04015 3.3e-106 yvdD 3.2.2.10 S Belongs to the LOG family
LNIPHOMF_04016 6.8e-53 yvdC S MazG nucleotide pyrophosphohydrolase domain
LNIPHOMF_04017 2.1e-288 sulP P COG0659 Sulfate permease and related transporters (MFS superfamily)
LNIPHOMF_04018 5.7e-106 ytiB 4.2.1.1 P Reversible hydration of carbon dioxide
LNIPHOMF_04019 1.3e-184 ghrB 1.1.1.215, 1.1.1.26, 1.1.1.43, 1.1.1.79, 1.1.1.81 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LNIPHOMF_04020 0.0 yxdM V ABC transporter (permease)
LNIPHOMF_04021 5.6e-141 yvcR V ABC transporter, ATP-binding protein
LNIPHOMF_04022 2.3e-198 yvcQ 2.7.13.3 T His Kinase A (phosphoacceptor) domain
LNIPHOMF_04023 3.9e-133 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LNIPHOMF_04024 1.8e-33
LNIPHOMF_04025 8.6e-147 nhoA 2.3.1.118 Q Belongs to the arylamine N-acetyltransferase family
LNIPHOMF_04026 1.6e-36 crh G Phosphocarrier protein Chr
LNIPHOMF_04027 1.4e-170 whiA K May be required for sporulation
LNIPHOMF_04028 7.3e-178 ybhK S Required for morphogenesis under gluconeogenic growth conditions
LNIPHOMF_04029 5.7e-166 rapZ S Displays ATPase and GTPase activities
LNIPHOMF_04030 1.8e-89 yvcI 3.6.1.55 F COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
LNIPHOMF_04031 1.4e-175 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
LNIPHOMF_04032 1.4e-102 usp CBM50 M protein conserved in bacteria
LNIPHOMF_04034 8e-81 ppiB 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LNIPHOMF_04035 1.3e-149 ypuA S Secreted protein
LNIPHOMF_04036 5.2e-256 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
LNIPHOMF_04037 1.4e-273 spoVAF EG Stage V sporulation protein AF
LNIPHOMF_04038 1.4e-110 spoVAEA S stage V sporulation protein
LNIPHOMF_04039 2.2e-57 spoVAEB S stage V sporulation protein
LNIPHOMF_04040 6.3e-72 spoVAD I Stage V sporulation protein AD
LNIPHOMF_04041 1.4e-98 yvbF K Belongs to the GbsR family
LNIPHOMF_04042 6.4e-103 yvbG U UPF0056 membrane protein
LNIPHOMF_04043 8.6e-113 yvbH S YvbH-like oligomerisation region
LNIPHOMF_04044 4.2e-124 exoY M Membrane
LNIPHOMF_04045 0.0 tcaA S response to antibiotic
LNIPHOMF_04046 7.7e-82 yvbK 3.1.3.25 K acetyltransferase
LNIPHOMF_04047 8.5e-176 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
LNIPHOMF_04048 3.5e-65 S Family of unknown function (DUF5391)
LNIPHOMF_04049 6.8e-93 S PQQ-like domain
LNIPHOMF_04050 7.6e-214 yxaM U MFS_1 like family
LNIPHOMF_04051 0.0 asnB 6.3.5.4 E Asparagine synthase
LNIPHOMF_04052 1.1e-86 yxnB
LNIPHOMF_04053 4.9e-44 S Coenzyme PQQ synthesis protein D (PqqD)
LNIPHOMF_04054 3.3e-127 yxbB Q Met-10+ like-protein
LNIPHOMF_04055 1.8e-226 pucR QT COG2508 Regulator of polyketide synthase expression
LNIPHOMF_04056 2.1e-236 pbuX F Permease family
LNIPHOMF_04057 1.3e-224 pbuX F xanthine
LNIPHOMF_04058 6.6e-284 uraD 1.7.3.3, 3.5.1.41, 4.1.1.97 Q Catalyzes the oxidation of uric acid to 5- hydroxyisourate, which is further processed to form (S)-allantoin
LNIPHOMF_04059 7.3e-61 uraH 3.5.2.17, 4.1.1.97 S Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily
LNIPHOMF_04060 4.7e-64 rpsI J Belongs to the universal ribosomal protein uS9 family
LNIPHOMF_04061 6.4e-78 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LNIPHOMF_04062 2.8e-142 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
LNIPHOMF_04063 4.7e-119 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LNIPHOMF_04064 8.8e-153 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LNIPHOMF_04065 5.1e-156 cbiO P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LNIPHOMF_04066 3.6e-58 rplQ J Ribosomal protein L17
LNIPHOMF_04067 3.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LNIPHOMF_04068 7e-103 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LNIPHOMF_04069 1.4e-80 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
LNIPHOMF_04070 1.4e-96 4.2.1.115 GM Polysaccharide biosynthesis protein
LNIPHOMF_04071 2.7e-307 yokA L Recombinase
LNIPHOMF_04072 1.6e-107
LNIPHOMF_04073 8.9e-95
LNIPHOMF_04076 8.4e-156 aacC 2.3.1.81 V aminoglycoside
LNIPHOMF_04077 8.2e-145 ybaJ Q Methyltransferase domain
LNIPHOMF_04078 9.7e-66 ybaK S Protein of unknown function (DUF2521)
LNIPHOMF_04079 1.1e-132 cwlD 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
LNIPHOMF_04080 1.4e-198 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
LNIPHOMF_04081 1.2e-84 gerD
LNIPHOMF_04082 1.3e-102 kbaA 2.7.8.43 S Involved in the activation of the KinB signaling pathway of sporulation
LNIPHOMF_04083 1.2e-140 pdaB 3.5.1.104 G Polysaccharide deacetylase
LNIPHOMF_04084 1.1e-86 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LNIPHOMF_04085 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
LNIPHOMF_04086 2.3e-70 S Regulatory protein YrvL
LNIPHOMF_04088 1.2e-97 ymcC S Membrane
LNIPHOMF_04089 4.4e-109 pksA K Transcriptional regulator
LNIPHOMF_04090 2.5e-129 pksB 3.1.2.6 S Polyketide biosynthesis
LNIPHOMF_04091 1.9e-148 czcD P COG1230 Co Zn Cd efflux system component
LNIPHOMF_04092 2e-199 trkA P Oxidoreductase
LNIPHOMF_04093 5.9e-160 yrdQ K Transcriptional regulator
LNIPHOMF_04094 1.7e-171 yrdR EG EamA-like transporter family
LNIPHOMF_04095 2.1e-17 S YrzO-like protein
LNIPHOMF_04096 6e-263 S DNA-sulfur modification-associated
LNIPHOMF_04097 6.8e-198 L Belongs to the 'phage' integrase family
LNIPHOMF_04102 6.6e-106
LNIPHOMF_04104 1.8e-141 yhfI S COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III
LNIPHOMF_04105 2e-191 lplJ 6.3.1.20 H Lipoate-protein ligase
LNIPHOMF_04106 2.6e-112 yhfK GM NmrA-like family
LNIPHOMF_04107 7.3e-302 fadD 6.2.1.3 IQ AMP-binding enzyme C-terminal domain
LNIPHOMF_04108 1.9e-65 yhfM
LNIPHOMF_04109 5.4e-242 yhfN 3.4.24.84 O Peptidase M48
LNIPHOMF_04110 2.3e-204 aprE 3.4.21.62 O Belongs to the peptidase S8 family
LNIPHOMF_04111 9.2e-80 VY92_01935 K acetyltransferase
LNIPHOMF_04112 8.3e-182 yhfP 1.1.1.1 C Quinone oxidoreductase
LNIPHOMF_04113 4.3e-159 yfmC M Periplasmic binding protein
LNIPHOMF_04114 1.9e-109 yhfR 3.1.3.73 G Belongs to the phosphoglycerate mutase family
LNIPHOMF_04115 2.3e-201 vraB 2.3.1.9 I Belongs to the thiolase family
LNIPHOMF_04116 1e-281 yhfT 6.2.1.3 IQ AMP-binding enzyme C-terminal domain
LNIPHOMF_04117 5e-91 bioY S BioY family
LNIPHOMF_04118 6.6e-171 hemAT NT chemotaxis protein
LNIPHOMF_04119 1.1e-302 yhfW CE COG0665 Glycine D-amino acid oxidases (deaminating)
LNIPHOMF_04120 1.6e-157 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
LNIPHOMF_04121 1.3e-32 yhzC S IDEAL
LNIPHOMF_04122 4.2e-109 comK K Competence transcription factor
LNIPHOMF_04123 2.1e-168 IQ Enoyl-(Acyl carrier protein) reductase
LNIPHOMF_04124 7.8e-42 yhjA S Excalibur calcium-binding domain
LNIPHOMF_04125 6.1e-266 yhjB E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LNIPHOMF_04126 6.9e-27 yhjC S Protein of unknown function (DUF3311)
LNIPHOMF_04127 5e-60 yhjD
LNIPHOMF_04128 9.1e-110 yhjE S SNARE associated Golgi protein
LNIPHOMF_04129 1.2e-91 sipV 3.4.21.89 U Belongs to the peptidase S26 family
LNIPHOMF_04130 1.1e-286 yhjG CH FAD binding domain
LNIPHOMF_04131 1.2e-94 yhjH K helix_turn_helix multiple antibiotic resistance protein
LNIPHOMF_04132 6.9e-215 glcP G Major Facilitator Superfamily
LNIPHOMF_04133 1.1e-200 thuB 1.1.1.361 S Oxidoreductase family, C-terminal alpha/beta domain
LNIPHOMF_04134 1.8e-161 ntdB 3.1.3.92 S Sucrose-6F-phosphate phosphohydrolase
LNIPHOMF_04135 4.4e-255 ntdA 2.6.1.104 E Belongs to the DegT DnrJ EryC1 family
LNIPHOMF_04136 7e-189 yhjM 5.1.1.1 K Transcriptional regulator
LNIPHOMF_04137 3.8e-202 abrB S membrane
LNIPHOMF_04138 3.1e-215 EGP Transmembrane secretion effector
LNIPHOMF_04139 0.0 S Sugar transport-related sRNA regulator N-term
LNIPHOMF_04140 2e-36 yhjQ C COG1145 Ferredoxin
LNIPHOMF_04141 2.2e-78 yhjR S Rubrerythrin
LNIPHOMF_04142 0.0 addB 3.1.21.3, 3.6.4.12 L ATP-dependent helicase deoxyribonuclease subunit B
LNIPHOMF_04143 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
LNIPHOMF_04144 1.7e-221 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
LNIPHOMF_04145 0.0 sbcC L COG0419 ATPase involved in DNA repair
LNIPHOMF_04146 6e-51 yisB V COG1403 Restriction endonuclease
LNIPHOMF_04147 4.5e-32 gerPF S Spore germination protein gerPA/gerPF
LNIPHOMF_04148 3e-66 gerPE S Spore germination protein GerPE
LNIPHOMF_04149 6.3e-24 gerPD S Spore germination protein
LNIPHOMF_04150 1.8e-54 gerPC S Spore germination protein
LNIPHOMF_04151 4e-34 gerPB S cell differentiation
LNIPHOMF_04152 1.9e-33 gerPA S Spore germination protein
LNIPHOMF_04153 1.5e-22 yisI S Spo0E like sporulation regulatory protein
LNIPHOMF_04154 1.7e-176 cotH M Spore Coat
LNIPHOMF_04155 3.2e-172 yisK Q COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
LNIPHOMF_04156 3e-57 yisL S UPF0344 protein
LNIPHOMF_04157 0.0 wprA O Belongs to the peptidase S8 family
LNIPHOMF_04158 7.2e-106 yisN S Protein of unknown function (DUF2777)
LNIPHOMF_04159 0.0 asnO 6.3.5.4 E Asparagine synthase
LNIPHOMF_04160 2.1e-88 yizA S Damage-inducible protein DinB
LNIPHOMF_04161 6.8e-150 crtB 2.5.1.21, 2.5.1.32, 2.5.1.99 I phytoene
LNIPHOMF_04162 4e-243 yisQ V Mate efflux family protein
LNIPHOMF_04163 1.2e-160 yisR K Transcriptional regulator
LNIPHOMF_04164 2.4e-184 purR K helix_turn _helix lactose operon repressor
LNIPHOMF_04165 4.5e-199 yisS 1.1.1.370 S Oxidoreductase family, C-terminal alpha/beta domain
LNIPHOMF_04166 1.3e-93 yisT S DinB family
LNIPHOMF_04167 6.4e-108 argO S Lysine exporter protein LysE YggA
LNIPHOMF_04168 1.7e-281 yisV K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
LNIPHOMF_04169 4e-36 mcbG S Pentapeptide repeats (9 copies)
LNIPHOMF_04170 3.1e-155 yisY I hydrolases or acyltransferases (alpha beta hydrolase superfamily)
LNIPHOMF_04171 4.9e-113 cysC 1.8.4.10, 1.8.4.8, 2.7.1.25, 2.7.7.4 P Catalyzes the synthesis of activated sulfate
LNIPHOMF_04172 3.2e-233 sat 2.7.7.4 P Belongs to the sulfate adenylyltransferase family
LNIPHOMF_04173 9.2e-143 cysH 1.8.4.10, 1.8.4.8, 2.7.1.25 EH Belongs to the PAPS reductase family. CysH subfamily
LNIPHOMF_04174 4.9e-125 comB 3.1.3.71 H Belongs to the ComB family
LNIPHOMF_04175 1.9e-141 yitD 4.4.1.19 S synthase
LNIPHOMF_04176 7.2e-113 yitE S Uncharacterised 5xTM membrane BCR, YitT family COG1284
LNIPHOMF_04177 5.4e-222 yitF 5.5.1.27 M Belongs to the mandelate racemase muconate lactonizing enzyme family
LNIPHOMF_04178 4e-229 yitG EGP Major facilitator Superfamily
LNIPHOMF_04179 1.8e-161 yitH K Acetyltransferase (GNAT) domain
LNIPHOMF_04180 2e-82 yjcF S Acetyltransferase (GNAT) domain
LNIPHOMF_04181 0.0 yitJ 1.5.1.20, 2.1.1.10, 2.1.1.13 E Catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
LNIPHOMF_04182 8.6e-55 yajQ S Belongs to the UPF0234 family
LNIPHOMF_04183 4e-161 cvfB S protein conserved in bacteria
LNIPHOMF_04184 8.5e-94
LNIPHOMF_04185 2.8e-171
LNIPHOMF_04186 1.5e-97 S Sporulation delaying protein SdpA
LNIPHOMF_04187 1.5e-58 K Transcriptional regulator PadR-like family
LNIPHOMF_04188 2e-95
LNIPHOMF_04189 1.4e-44 yitR S Domain of unknown function (DUF3784)
LNIPHOMF_04190 2.2e-311 nprB 3.4.24.28 E Peptidase M4
LNIPHOMF_04191 8.4e-159 yitS S protein conserved in bacteria
LNIPHOMF_04192 6.6e-148 yitT S Uncharacterized protein conserved in bacteria (DUF2179)
LNIPHOMF_04193 1.9e-72 ipi S Intracellular proteinase inhibitor
LNIPHOMF_04194 1.2e-17 S Protein of unknown function (DUF3813)
LNIPHOMF_04195 1.9e-155 yitU 3.1.3.104 S hydrolases of the HAD superfamily
LNIPHOMF_04196 4.5e-143 yjfP S COG1073 Hydrolases of the alpha beta superfamily
LNIPHOMF_04197 4.7e-51 yitW S metal-sulfur cluster biosynthetic enzyme
LNIPHOMF_04198 1.5e-22 pilT S Proteolipid membrane potential modulator
LNIPHOMF_04199 4.3e-272 yitY C D-arabinono-1,4-lactone oxidase
LNIPHOMF_04200 1.7e-88 norB G Major Facilitator Superfamily

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)