ORF_ID e_value Gene_name EC_number CAZy COGs Description
IINDBAKN_00001 5.2e-248 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
IINDBAKN_00002 3.6e-205 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
IINDBAKN_00003 1.7e-34 yaaA S S4 domain protein YaaA
IINDBAKN_00004 1.5e-203 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
IINDBAKN_00005 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
IINDBAKN_00006 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
IINDBAKN_00007 3.6e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
IINDBAKN_00008 6.4e-91 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
IINDBAKN_00009 2.1e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
IINDBAKN_00010 1.9e-165 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
IINDBAKN_00011 1.3e-193 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
IINDBAKN_00012 1.2e-74 rplI J Binds to the 23S rRNA
IINDBAKN_00013 1.8e-243 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
IINDBAKN_00014 5.2e-207 lmrP E Major Facilitator Superfamily
IINDBAKN_00015 6.3e-50
IINDBAKN_00016 9.5e-247 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
IINDBAKN_00019 6.8e-130 K response regulator
IINDBAKN_00020 0.0 vicK 2.7.13.3 T Histidine kinase
IINDBAKN_00021 2.2e-97 yycH S YycH protein
IINDBAKN_00022 1.4e-124 yycH S YycH protein
IINDBAKN_00023 9.4e-144 yycI S YycH protein
IINDBAKN_00024 6e-154 vicX 3.1.26.11 S domain protein
IINDBAKN_00025 8.6e-208 htrA 3.4.21.107 O serine protease
IINDBAKN_00026 3e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
IINDBAKN_00027 5.7e-71 K Transcriptional regulator
IINDBAKN_00028 3.2e-175 malR K Transcriptional regulator, LacI family
IINDBAKN_00029 1.1e-250 malT G Major Facilitator
IINDBAKN_00030 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
IINDBAKN_00031 1.4e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
IINDBAKN_00032 1.1e-110 ysdA CP transmembrane transport
IINDBAKN_00033 9e-189 pacA 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
IINDBAKN_00034 4.1e-183 D Alpha beta
IINDBAKN_00035 3.9e-84 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IINDBAKN_00036 3.5e-80 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IINDBAKN_00037 2.5e-217 patA 2.6.1.1 E Aminotransferase
IINDBAKN_00038 2.7e-35
IINDBAKN_00039 0.0 clpL O associated with various cellular activities
IINDBAKN_00040 1.8e-278 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IINDBAKN_00041 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
IINDBAKN_00042 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
IINDBAKN_00043 2.6e-163 yvgN C Aldo keto reductase
IINDBAKN_00044 4.7e-291 glpQ 3.1.4.46 C phosphodiesterase
IINDBAKN_00045 1.7e-65 arsC 1.20.4.1 P Belongs to the ArsC family
IINDBAKN_00046 1.3e-188 ybhR V ABC transporter
IINDBAKN_00047 1.5e-127 ybhF_2 V AAA domain, putative AbiEii toxin, Type IV TA system
IINDBAKN_00048 1.1e-90 K transcriptional regulator
IINDBAKN_00049 7.4e-167 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
IINDBAKN_00050 1.2e-249 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
IINDBAKN_00051 4.4e-258 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
IINDBAKN_00052 1.9e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
IINDBAKN_00053 1.4e-130 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
IINDBAKN_00054 8.5e-116 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
IINDBAKN_00055 2.7e-238 L transposase, IS605 OrfB family
IINDBAKN_00056 1.3e-81 tlpA2 L Transposase IS200 like
IINDBAKN_00057 2.3e-28 gntT EG gluconate transmembrane transporter activity
IINDBAKN_00058 4e-47
IINDBAKN_00059 3.2e-273 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
IINDBAKN_00060 1.6e-261 tagE2 2.4.1.52 GT4 M Poly(Glycerol-phosphate) alpha-glucosyltransferase
IINDBAKN_00061 3.9e-148 metQ1 P Belongs to the nlpA lipoprotein family
IINDBAKN_00062 4.2e-192 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
IINDBAKN_00063 6.8e-18 metI P ABC transporter permease
IINDBAKN_00064 7e-69 metI P ABC transporter permease
IINDBAKN_00065 1.8e-220 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
IINDBAKN_00066 2.2e-244 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
IINDBAKN_00067 9.7e-197 brnQ U Component of the transport system for branched-chain amino acids
IINDBAKN_00068 1.1e-122 iolS C Aldo keto reductase
IINDBAKN_00069 4.6e-249 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
IINDBAKN_00070 1.2e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
IINDBAKN_00071 7e-239 dltB M MBOAT, membrane-bound O-acyltransferase family
IINDBAKN_00072 1.4e-297 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
IINDBAKN_00074 4.2e-155 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
IINDBAKN_00075 0.0 sbcC L Putative exonuclease SbcCD, C subunit
IINDBAKN_00076 4.1e-229 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
IINDBAKN_00078 1.4e-189 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
IINDBAKN_00080 2.1e-226 glnP P ABC transporter
IINDBAKN_00081 3e-136 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
IINDBAKN_00082 5.8e-250 cycA E Amino acid permease
IINDBAKN_00083 4.9e-213 nupG F Nucleoside transporter
IINDBAKN_00084 2.2e-144 rihC 3.2.2.1 F Nucleoside
IINDBAKN_00085 2e-132 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
IINDBAKN_00086 3.5e-158 noc K Belongs to the ParB family
IINDBAKN_00087 7.3e-147 spo0J K Belongs to the ParB family
IINDBAKN_00088 1.2e-31 yyzM S Bacterial protein of unknown function (DUF951)
IINDBAKN_00089 9.7e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
IINDBAKN_00090 1.2e-135 XK27_01040 S Protein of unknown function (DUF1129)
IINDBAKN_00091 3.5e-208 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
IINDBAKN_00092 2e-167 brpA K Cell envelope-like function transcriptional attenuator common domain protein
IINDBAKN_00093 5e-126 epsB M biosynthesis protein
IINDBAKN_00094 5.2e-112 ywqD 2.7.10.1 D Capsular exopolysaccharide family
IINDBAKN_00095 2.7e-140 ywqE 3.1.3.48 GM PHP domain protein
IINDBAKN_00096 1.1e-132 cps2D 5.1.3.2 M RmlD substrate binding domain
IINDBAKN_00097 1.4e-90 tuaA M Bacterial sugar transferase
IINDBAKN_00098 6.6e-27 S Glycosyl transferase family 2
IINDBAKN_00099 2.1e-98 lsgF M Glycosyltransferase, group 2 family protein
IINDBAKN_00100 1.3e-114 M Glycosyl transferases group 1
IINDBAKN_00101 1.9e-34 cpsJ S Glycosyltransferase like family 2
IINDBAKN_00102 3.3e-32 M Glycosyltransferase group 2 family protein
IINDBAKN_00104 2.5e-08 tagF 2.7.8.12 M Glycosyltransferase like family 2
IINDBAKN_00105 3.5e-101 S polysaccharide biosynthetic process
IINDBAKN_00106 3.6e-51 L Transposase
IINDBAKN_00107 8.7e-156 L Transposase
IINDBAKN_00108 9e-92 S Cupin superfamily (DUF985)
IINDBAKN_00109 9.4e-124 K response regulator
IINDBAKN_00110 1.1e-206 hpk31 2.7.13.3 T Histidine kinase
IINDBAKN_00111 1.2e-204 dacA 3.4.16.4 M Belongs to the peptidase S11 family
IINDBAKN_00112 8.8e-148 azlC E AzlC protein
IINDBAKN_00113 8.9e-61 azlD S branched-chain amino acid
IINDBAKN_00114 2.9e-81 tlpA2 L Transposase IS200 like
IINDBAKN_00115 3.3e-236 L transposase, IS605 OrfB family
IINDBAKN_00116 4.5e-230 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
IINDBAKN_00117 6.2e-11 K transcriptional regulator
IINDBAKN_00118 1.9e-165 K AI-2E family transporter
IINDBAKN_00119 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
IINDBAKN_00120 8.1e-82 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
IINDBAKN_00121 5e-215 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
IINDBAKN_00122 3.3e-255 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
IINDBAKN_00123 1e-171 hrpQ 4.6.1.1 T histone H2A K63-linked ubiquitination
IINDBAKN_00124 1.8e-244 S response to antibiotic
IINDBAKN_00125 1.7e-95 nagZ 3.2.1.52 G Glycosyl hydrolase family 3 N terminal domain
IINDBAKN_00126 1.5e-66 IQ Dehydrogenase
IINDBAKN_00127 3e-19 K HxlR-like helix-turn-helix
IINDBAKN_00128 2.5e-135 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
IINDBAKN_00129 3e-37 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
IINDBAKN_00130 1.6e-128 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
IINDBAKN_00131 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
IINDBAKN_00132 2e-280 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
IINDBAKN_00133 1.2e-196 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
IINDBAKN_00134 6e-108 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
IINDBAKN_00135 7.8e-296 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
IINDBAKN_00136 2e-241 purD 6.3.4.13 F Belongs to the GARS family
IINDBAKN_00137 1.7e-81 tlpA2 L Transposase IS200 like
IINDBAKN_00138 2.6e-233 L transposase, IS605 OrfB family
IINDBAKN_00139 1.6e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
IINDBAKN_00140 1.5e-222 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
IINDBAKN_00141 1.4e-176
IINDBAKN_00142 1.9e-46 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
IINDBAKN_00143 3.3e-52 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
IINDBAKN_00144 0.0 copA 3.6.3.54 P P-type ATPase
IINDBAKN_00145 3.4e-18 EGP Major facilitator Superfamily
IINDBAKN_00146 4.7e-90 2.4.2.6 F nucleoside 2-deoxyribosyltransferase
IINDBAKN_00147 9.8e-77
IINDBAKN_00150 1.4e-28 S Domain of unknown function (DUF4767)
IINDBAKN_00151 6e-43 S Tautomerase enzyme
IINDBAKN_00152 2.6e-09 S Tautomerase enzyme
IINDBAKN_00153 2e-120 pnb C nitroreductase
IINDBAKN_00154 1.4e-101 S Alpha/beta hydrolase family
IINDBAKN_00156 6.2e-44 K Bacterial regulatory helix-turn-helix protein, lysR family
IINDBAKN_00157 4.3e-10 K Bacterial regulatory helix-turn-helix protein, lysR family
IINDBAKN_00158 2.1e-40 C Aldo keto reductase
IINDBAKN_00159 1.1e-15 C Aldo keto reductase
IINDBAKN_00162 1.2e-29 C Aldo/keto reductase family
IINDBAKN_00163 1.5e-90 P Cadmium resistance transporter
IINDBAKN_00164 3.4e-140 L PFAM Integrase catalytic region
IINDBAKN_00165 1.2e-32 ydzE EG spore germination
IINDBAKN_00166 2.9e-54 4.1.1.44 O Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
IINDBAKN_00167 2.9e-51
IINDBAKN_00168 1.3e-281 isdH M Iron Transport-associated domain
IINDBAKN_00169 2.3e-94 M Iron Transport-associated domain
IINDBAKN_00170 2.8e-149 isdE P Periplasmic binding protein
IINDBAKN_00171 7.5e-153 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IINDBAKN_00172 4.2e-141 fhuC 3.6.3.34 HP ABC transporter, ATP-binding protein
IINDBAKN_00173 7.7e-236 kgtP EGP Sugar (and other) transporter
IINDBAKN_00174 1.5e-17 M domain protein
IINDBAKN_00175 2.2e-57
IINDBAKN_00176 1.1e-158 xth 3.1.11.2 L exodeoxyribonuclease III
IINDBAKN_00177 9.8e-77
IINDBAKN_00178 9.9e-180 1.1.1.26 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IINDBAKN_00179 8.9e-27 pucG 2.6.1.112, 2.6.1.44, 2.6.1.45, 2.6.1.51 E Aminotransferase class-V
IINDBAKN_00180 2.1e-26 pucG 2.6.1.112, 2.6.1.44, 2.6.1.45, 2.6.1.51 E Aminotransferase class-V
IINDBAKN_00181 8.3e-68 pucG 2.6.1.112, 2.6.1.44, 2.6.1.45, 2.6.1.51 E Aminotransferase class-V
IINDBAKN_00182 4.3e-41 sucD 6.2.1.5 C Protein of unknown function (DUF1116)
IINDBAKN_00185 9.4e-119 arcC 2.7.2.2 E Amino acid kinase family
IINDBAKN_00186 1.2e-177 rihA 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
IINDBAKN_00187 3e-124 C nitroreductase
IINDBAKN_00188 4.6e-137 E GDSL-like Lipase/Acylhydrolase family
IINDBAKN_00189 6.5e-81 tlpA2 L Transposase IS200 like
IINDBAKN_00190 2.7e-238 L transposase, IS605 OrfB family
IINDBAKN_00191 2.4e-48 S Mazg nucleotide pyrophosphohydrolase
IINDBAKN_00192 5.6e-197 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
IINDBAKN_00193 0.0 pepN 3.4.11.2 E aminopeptidase
IINDBAKN_00194 1.5e-89 K Transcriptional regulator
IINDBAKN_00195 1e-24 phaG GT1 I carboxylic ester hydrolase activity
IINDBAKN_00196 2.1e-140 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
IINDBAKN_00198 1.6e-154 metQ_4 P Belongs to the nlpA lipoprotein family
IINDBAKN_00199 4e-204 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
IINDBAKN_00200 0.0 helD 3.6.4.12 L DNA helicase
IINDBAKN_00201 6.6e-173 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
IINDBAKN_00202 2.6e-220 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
IINDBAKN_00203 2.2e-187
IINDBAKN_00204 2.2e-128 cobB K SIR2 family
IINDBAKN_00205 1.5e-211 norA EGP Major facilitator Superfamily
IINDBAKN_00206 1.2e-162 yunF F Protein of unknown function DUF72
IINDBAKN_00207 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
IINDBAKN_00208 1.8e-147 tatD L hydrolase, TatD family
IINDBAKN_00209 5.6e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
IINDBAKN_00210 2.5e-161 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
IINDBAKN_00211 1.3e-159 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
IINDBAKN_00212 4e-167 znuA P Belongs to the bacterial solute-binding protein 9 family
IINDBAKN_00213 5.4e-95 fhuC P ABC transporter
IINDBAKN_00214 3.2e-128 znuB U ABC 3 transport family
IINDBAKN_00215 7.5e-152 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
IINDBAKN_00216 7.3e-205 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
IINDBAKN_00217 1.4e-176 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
IINDBAKN_00218 3e-32
IINDBAKN_00219 4.8e-143 yxeH S hydrolase
IINDBAKN_00220 5.7e-266 ywfO S HD domain protein
IINDBAKN_00221 3.2e-74 ywiB S Domain of unknown function (DUF1934)
IINDBAKN_00222 1.6e-47 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
IINDBAKN_00223 2e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
IINDBAKN_00224 7.5e-236 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
IINDBAKN_00225 6e-41 rpmE2 J Ribosomal protein L31
IINDBAKN_00226 1.1e-51 mdtG EGP Major facilitator Superfamily
IINDBAKN_00227 1.4e-77 mdtG EGP Major facilitator Superfamily
IINDBAKN_00228 8.4e-81 tlpA2 L Transposase IS200 like
IINDBAKN_00229 5.7e-233 L transposase, IS605 OrfB family
IINDBAKN_00230 1.4e-122 srtA 3.4.22.70 M sortase family
IINDBAKN_00231 4.8e-47 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
IINDBAKN_00232 8.7e-88 lemA S LemA family
IINDBAKN_00233 2.9e-157 htpX O Belongs to the peptidase M48B family
IINDBAKN_00234 2.1e-260 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
IINDBAKN_00235 1.7e-252 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
IINDBAKN_00236 2.9e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
IINDBAKN_00237 9.6e-211 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
IINDBAKN_00238 5e-57 L Toxic component of a toxin-antitoxin (TA) module
IINDBAKN_00239 8.1e-114 S (CBS) domain
IINDBAKN_00240 9.6e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
IINDBAKN_00241 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
IINDBAKN_00242 1.6e-39 yabO J S4 domain protein
IINDBAKN_00243 1.5e-56 divIC D Septum formation initiator
IINDBAKN_00244 3e-87 yabR J RNA binding
IINDBAKN_00245 2.8e-257 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
IINDBAKN_00246 4.1e-98 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
IINDBAKN_00247 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
IINDBAKN_00248 1.3e-162 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
IINDBAKN_00249 1.9e-189 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
IINDBAKN_00250 1.2e-290 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
IINDBAKN_00253 9.8e-77
IINDBAKN_00256 5e-58 L hmm pf00665
IINDBAKN_00257 4.1e-74 3.6.4.12 L DnaB-like helicase C terminal domain
IINDBAKN_00261 2.8e-161 D nuclear chromosome segregation
IINDBAKN_00262 9e-257 dtpT U amino acid peptide transporter
IINDBAKN_00263 1e-164 yjjH S Calcineurin-like phosphoesterase
IINDBAKN_00266 3.3e-115
IINDBAKN_00267 4.3e-132 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
IINDBAKN_00268 1.4e-127 gntR1 K UbiC transcription regulator-associated domain protein
IINDBAKN_00269 1.4e-283 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
IINDBAKN_00270 8.8e-153 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
IINDBAKN_00271 0.0 yhgF K Tex-like protein N-terminal domain protein
IINDBAKN_00272 1.6e-60 ydcK S Belongs to the SprT family
IINDBAKN_00274 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
IINDBAKN_00275 1.8e-189 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
IINDBAKN_00276 5e-168 mleP2 S Sodium Bile acid symporter family
IINDBAKN_00277 6.1e-128 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
IINDBAKN_00278 4.3e-166 I alpha/beta hydrolase fold
IINDBAKN_00279 4e-264 pepC 3.4.22.40 E Peptidase C1-like family
IINDBAKN_00280 5.4e-91 maa 2.3.1.18, 2.3.1.79 S Transferase hexapeptide repeat
IINDBAKN_00281 1.8e-122 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
IINDBAKN_00282 4.2e-55 HA62_12640 S GCN5-related N-acetyl-transferase
IINDBAKN_00283 1.5e-97 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
IINDBAKN_00284 1.2e-252 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
IINDBAKN_00285 1.2e-205 yacL S domain protein
IINDBAKN_00286 9.6e-291 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
IINDBAKN_00287 7.8e-100 ywlG S Belongs to the UPF0340 family
IINDBAKN_00288 9.4e-272 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
IINDBAKN_00289 5.5e-71 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
IINDBAKN_00290 2.6e-135 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IINDBAKN_00291 5.3e-104 sigH K Belongs to the sigma-70 factor family
IINDBAKN_00292 3.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
IINDBAKN_00293 2.4e-23 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
IINDBAKN_00294 4.5e-97 nusG K Participates in transcription elongation, termination and antitermination
IINDBAKN_00295 2.2e-51 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
IINDBAKN_00296 6.7e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
IINDBAKN_00297 1.7e-243 steT E amino acid
IINDBAKN_00298 8.4e-82 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
IINDBAKN_00299 4.6e-53 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
IINDBAKN_00300 9.5e-272 cydA 1.10.3.14 C ubiquinol oxidase
IINDBAKN_00301 7.7e-175 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
IINDBAKN_00302 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
IINDBAKN_00303 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
IINDBAKN_00304 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
IINDBAKN_00305 4.1e-248 brnQ U Component of the transport system for branched-chain amino acids
IINDBAKN_00306 8.6e-195 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IINDBAKN_00307 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IINDBAKN_00308 2e-35 nrdH O Glutaredoxin
IINDBAKN_00309 6.3e-80 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
IINDBAKN_00311 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
IINDBAKN_00312 4.9e-40 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
IINDBAKN_00313 3e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
IINDBAKN_00314 2.4e-21 S Protein of unknown function (DUF2508)
IINDBAKN_00315 6e-117 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
IINDBAKN_00316 1.2e-52 yaaQ S Cyclic-di-AMP receptor
IINDBAKN_00317 2.4e-192 holB 2.7.7.7 L DNA polymerase III
IINDBAKN_00318 1.5e-55 yabA L Involved in initiation control of chromosome replication
IINDBAKN_00319 2.7e-157 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
IINDBAKN_00320 9.5e-146 fat 3.1.2.21 I Acyl-ACP thioesterase
IINDBAKN_00321 4.3e-283 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
IINDBAKN_00322 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
IINDBAKN_00323 2.3e-173 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
IINDBAKN_00324 1e-192 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
IINDBAKN_00325 4.2e-150 KT YcbB domain
IINDBAKN_00326 6e-188 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
IINDBAKN_00327 1.4e-167 arcC 2.7.2.2 E Belongs to the carbamate kinase family
IINDBAKN_00328 8.2e-240 arcA 3.5.3.6 E Arginine
IINDBAKN_00329 2.4e-259 E Arginine ornithine antiporter
IINDBAKN_00330 2.7e-221 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
IINDBAKN_00331 9.9e-216 arcT 2.6.1.1 E Aminotransferase
IINDBAKN_00332 5.8e-132 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
IINDBAKN_00333 1.3e-110 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
IINDBAKN_00334 1.2e-194 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
IINDBAKN_00336 2.7e-76 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
IINDBAKN_00337 8.7e-75 marR K Transcriptional regulator, MarR family
IINDBAKN_00338 4.9e-171 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
IINDBAKN_00339 4.2e-34 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
IINDBAKN_00340 1.1e-172 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
IINDBAKN_00341 2.7e-129 IQ reductase
IINDBAKN_00342 6e-230 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
IINDBAKN_00343 1.6e-63 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
IINDBAKN_00344 1.3e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
IINDBAKN_00345 3e-262 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
IINDBAKN_00346 1.7e-159 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
IINDBAKN_00347 1e-139 accA 2.1.3.15, 6.4.1.2 I alpha subunit
IINDBAKN_00348 1.5e-135 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
IINDBAKN_00349 9.7e-92 bioY S BioY family
IINDBAKN_00350 5.6e-175 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
IINDBAKN_00351 0.0 uup S ABC transporter, ATP-binding protein
IINDBAKN_00352 4.4e-115 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
IINDBAKN_00353 2.1e-42 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
IINDBAKN_00354 5.7e-289 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
IINDBAKN_00355 0.0 ydaO E amino acid
IINDBAKN_00356 6.4e-38
IINDBAKN_00357 1.1e-113 yvyE 3.4.13.9 S YigZ family
IINDBAKN_00358 2.6e-252 comFA L Helicase C-terminal domain protein
IINDBAKN_00359 4.7e-128 comFC S Competence protein
IINDBAKN_00360 6.5e-96 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
IINDBAKN_00361 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
IINDBAKN_00362 2e-202 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
IINDBAKN_00363 4.1e-53 KT PspC domain protein
IINDBAKN_00364 5.1e-49 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
IINDBAKN_00365 2e-177 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
IINDBAKN_00366 5.6e-163 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
IINDBAKN_00367 5.3e-184 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
IINDBAKN_00368 2.1e-171 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
IINDBAKN_00369 2.3e-147 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
IINDBAKN_00370 1.7e-185 mtnE 2.6.1.83 E Aminotransferase
IINDBAKN_00371 7.8e-28 mtnE 2.6.1.83 E Aminotransferase
IINDBAKN_00372 5.8e-188 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
IINDBAKN_00373 1.6e-78 yphH S Cupin domain
IINDBAKN_00374 2.6e-132 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
IINDBAKN_00375 7.8e-154 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
IINDBAKN_00376 3.4e-169 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
IINDBAKN_00377 2.5e-197 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
IINDBAKN_00378 5.6e-172 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
IINDBAKN_00379 2e-138 cof S haloacid dehalogenase-like hydrolase
IINDBAKN_00380 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
IINDBAKN_00381 2e-112 yfbR S HD containing hydrolase-like enzyme
IINDBAKN_00383 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
IINDBAKN_00384 1.7e-282 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
IINDBAKN_00385 7.8e-263 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
IINDBAKN_00386 1.3e-204
IINDBAKN_00387 3.2e-161 rapZ S Displays ATPase and GTPase activities
IINDBAKN_00388 1.7e-187 ybhK S Required for morphogenesis under gluconeogenic growth conditions
IINDBAKN_00389 1.9e-167 whiA K May be required for sporulation
IINDBAKN_00390 6.5e-119 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
IINDBAKN_00391 1.7e-102 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
IINDBAKN_00395 2.1e-241 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
IINDBAKN_00396 1e-15
IINDBAKN_00397 4.5e-191 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
IINDBAKN_00398 6.6e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
IINDBAKN_00399 3.1e-144 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
IINDBAKN_00400 1e-248 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
IINDBAKN_00401 1.5e-253 yifK E Amino acid permease
IINDBAKN_00402 6.4e-290 clcA P chloride
IINDBAKN_00403 4.5e-33 secG U Preprotein translocase
IINDBAKN_00404 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
IINDBAKN_00405 2.9e-84 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
IINDBAKN_00406 3.2e-109 yxjI
IINDBAKN_00407 2.8e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
IINDBAKN_00408 2.4e-178 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
IINDBAKN_00409 2.9e-81 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
IINDBAKN_00410 3.3e-89 K Acetyltransferase (GNAT) domain
IINDBAKN_00411 1.3e-101 dnaQ 2.7.7.7 L DNA polymerase III
IINDBAKN_00412 2.2e-165 murB 1.3.1.98 M Cell wall formation
IINDBAKN_00413 7.8e-149 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
IINDBAKN_00414 2.7e-115 ybbR S YbbR-like protein
IINDBAKN_00415 3.2e-253 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
IINDBAKN_00416 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
IINDBAKN_00417 1.5e-52
IINDBAKN_00418 7.1e-211 oatA I Acyltransferase
IINDBAKN_00419 4e-150 XK27_02985 S Sucrose-6F-phosphate phosphohydrolase
IINDBAKN_00420 8.1e-76 lytE M Lysin motif
IINDBAKN_00421 9.2e-160 MA20_14895 S Conserved hypothetical protein 698
IINDBAKN_00422 8.1e-168 K LysR substrate binding domain
IINDBAKN_00423 1.7e-131 manA 5.3.1.8 G mannose-6-phosphate isomerase
IINDBAKN_00424 8.6e-148 yitS S EDD domain protein, DegV family
IINDBAKN_00425 6.5e-90 racA K Domain of unknown function (DUF1836)
IINDBAKN_00426 8.7e-181 yfeX P Peroxidase
IINDBAKN_00427 5.3e-181 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
IINDBAKN_00428 2.7e-122 manY G PTS system
IINDBAKN_00429 3e-170 manN G system, mannose fructose sorbose family IID component
IINDBAKN_00430 1.2e-57 S Domain of unknown function (DUF956)
IINDBAKN_00432 1.7e-131 K response regulator
IINDBAKN_00433 3.7e-250 yclK 2.7.13.3 T Histidine kinase
IINDBAKN_00434 1.7e-151 glcU U sugar transport
IINDBAKN_00435 2.3e-104 ahpC 1.11.1.15 O Peroxiredoxin
IINDBAKN_00436 0.0 trxB2 1.8.1.9 C Thioredoxin domain
IINDBAKN_00437 2.8e-257 pgi 5.3.1.9 G Belongs to the GPI family
IINDBAKN_00439 1.6e-85 K GNAT family
IINDBAKN_00440 1.8e-122 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
IINDBAKN_00441 4e-161 ytbE 1.1.1.346 S Aldo keto reductase
IINDBAKN_00442 1.7e-145 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
IINDBAKN_00443 6.6e-133 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
IINDBAKN_00445 2.3e-56
IINDBAKN_00448 1.5e-77 K Winged helix DNA-binding domain
IINDBAKN_00449 0.0 lmrA V ABC transporter, ATP-binding protein
IINDBAKN_00450 0.0 yfiC V ABC transporter
IINDBAKN_00451 9.7e-194 ampC V Beta-lactamase
IINDBAKN_00452 2.3e-133 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IINDBAKN_00453 2.5e-77 tlpA2 L Transposase IS200 like
IINDBAKN_00454 2.1e-238 L transposase, IS605 OrfB family
IINDBAKN_00455 1.5e-144 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IINDBAKN_00456 2.8e-48
IINDBAKN_00457 3.4e-140 cobQ S CobB/CobQ-like glutamine amidotransferase domain
IINDBAKN_00458 7.5e-263 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
IINDBAKN_00459 3.2e-109 tdk 2.7.1.21 F thymidine kinase
IINDBAKN_00460 2.5e-155 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
IINDBAKN_00461 7.1e-158 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
IINDBAKN_00462 3.4e-194 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
IINDBAKN_00463 1.7e-229 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
IINDBAKN_00464 1.2e-114 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
IINDBAKN_00465 3.3e-187 yibE S overlaps another CDS with the same product name
IINDBAKN_00466 1.5e-125 yibF S overlaps another CDS with the same product name
IINDBAKN_00467 1.6e-217 pyrP F Permease
IINDBAKN_00468 5.8e-129 atpB C it plays a direct role in the translocation of protons across the membrane
IINDBAKN_00469 1.2e-16 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
IINDBAKN_00470 3.7e-53 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
IINDBAKN_00471 7.4e-92 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
IINDBAKN_00472 2.1e-285 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
IINDBAKN_00473 2.3e-165 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
IINDBAKN_00474 4.4e-253 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
IINDBAKN_00475 6.4e-67 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
IINDBAKN_00476 2.8e-29 S Protein of unknown function (DUF1146)
IINDBAKN_00477 1.8e-218 murA 2.5.1.7 M EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
IINDBAKN_00478 2.6e-183 mbl D Cell shape determining protein MreB Mrl
IINDBAKN_00479 7.9e-32 S Protein of unknown function (DUF2969)
IINDBAKN_00480 2.2e-221 rodA D Belongs to the SEDS family
IINDBAKN_00482 5.3e-181 S Protein of unknown function (DUF2785)
IINDBAKN_00483 7.7e-216 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
IINDBAKN_00484 3.5e-149 2.3.1.19 K Helix-turn-helix XRE-family like proteins
IINDBAKN_00485 2.1e-241 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
IINDBAKN_00486 6.8e-81 usp6 T universal stress protein
IINDBAKN_00488 2e-236 rarA L recombination factor protein RarA
IINDBAKN_00489 3.2e-83 yueI S Protein of unknown function (DUF1694)
IINDBAKN_00490 3.3e-76 4.4.1.5 E Glyoxalase
IINDBAKN_00491 5.3e-133 S Membrane
IINDBAKN_00492 4.6e-149 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
IINDBAKN_00493 9.3e-80 tlpA2 L Transposase IS200 like
IINDBAKN_00494 6e-238 L transposase, IS605 OrfB family
IINDBAKN_00496 1.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
IINDBAKN_00497 2.2e-307 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
IINDBAKN_00498 2.9e-215 iscS2 2.8.1.7 E Aminotransferase class V
IINDBAKN_00499 3.9e-102 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
IINDBAKN_00500 6.3e-114 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
IINDBAKN_00501 2.9e-211 EG GntP family permease
IINDBAKN_00502 2.3e-204 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
IINDBAKN_00503 2.1e-241 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
IINDBAKN_00506 1.6e-88 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
IINDBAKN_00507 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
IINDBAKN_00508 1.9e-250 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
IINDBAKN_00509 2.5e-115 radC L DNA repair protein
IINDBAKN_00510 1.9e-181 mreB D cell shape determining protein MreB
IINDBAKN_00511 3.7e-146 mreC M Involved in formation and maintenance of cell shape
IINDBAKN_00512 6.6e-93 mreD M rod shape-determining protein MreD
IINDBAKN_00513 1.4e-108 glnP P ABC transporter permease
IINDBAKN_00514 2.2e-114 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
IINDBAKN_00515 2.4e-161 aatB ET ABC transporter substrate-binding protein
IINDBAKN_00516 1.5e-231 ymfF S Peptidase M16 inactive domain protein
IINDBAKN_00517 1.7e-251 ymfH S Peptidase M16
IINDBAKN_00518 1.8e-96 ymfM S Helix-turn-helix domain
IINDBAKN_00519 8.5e-102 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
IINDBAKN_00520 1.6e-65 cinA 3.5.1.42 S Belongs to the CinA family
IINDBAKN_00521 2e-135 cinA 3.5.1.42 S Belongs to the CinA family
IINDBAKN_00522 1.1e-192 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
IINDBAKN_00523 8.4e-205 rny S Endoribonuclease that initiates mRNA decay
IINDBAKN_00524 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
IINDBAKN_00525 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
IINDBAKN_00526 3.2e-104 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
IINDBAKN_00527 2.9e-190 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
IINDBAKN_00528 7.5e-177 2.4.2.29 F queuine tRNA-ribosyltransferase activity
IINDBAKN_00529 5.5e-42 yajC U Preprotein translocase
IINDBAKN_00530 6.8e-181 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
IINDBAKN_00531 8.4e-233 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
IINDBAKN_00532 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
IINDBAKN_00533 1.2e-42 yrzL S Belongs to the UPF0297 family
IINDBAKN_00534 9.6e-74 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
IINDBAKN_00535 5.7e-33 yrzB S Belongs to the UPF0473 family
IINDBAKN_00536 1.6e-163 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
IINDBAKN_00537 4.7e-91 cvpA S Colicin V production protein
IINDBAKN_00538 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
IINDBAKN_00539 1e-53 trxA O Belongs to the thioredoxin family
IINDBAKN_00540 1.9e-223 clcA_2 P Chloride transporter, ClC family
IINDBAKN_00541 8.7e-93 yslB S Protein of unknown function (DUF2507)
IINDBAKN_00542 1.4e-147 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
IINDBAKN_00543 1.1e-107 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
IINDBAKN_00544 1.4e-95 S Phosphoesterase
IINDBAKN_00545 6.4e-151 3.1.3.102, 3.1.3.104, 3.1.3.23 S haloacid dehalogenase-like hydrolase
IINDBAKN_00546 6.2e-157 ykuT M mechanosensitive ion channel
IINDBAKN_00547 9.2e-26 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
IINDBAKN_00548 1.1e-69
IINDBAKN_00549 1.2e-213 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
IINDBAKN_00550 7.4e-186 ccpA K catabolite control protein A
IINDBAKN_00551 3.6e-85
IINDBAKN_00552 3.7e-134 yebC K Transcriptional regulatory protein
IINDBAKN_00553 4.9e-84 mltD CBM50 M PFAM NLP P60 protein
IINDBAKN_00554 2.4e-143 ykcB M Dolichyl-phosphate-mannose-protein mannosyltransferase
IINDBAKN_00555 4.6e-112 ykcB M Dolichyl-phosphate-mannose-protein mannosyltransferase
IINDBAKN_00556 1.7e-38 ykcB M Dolichyl-phosphate-mannose-protein mannosyltransferase
IINDBAKN_00557 2.7e-177 comGA NU Type II IV secretion system protein
IINDBAKN_00558 2.3e-158 comGB NU type II secretion system
IINDBAKN_00559 1.1e-47 comGC U competence protein ComGC
IINDBAKN_00560 1.6e-12 NU general secretion pathway protein
IINDBAKN_00561 1e-14
IINDBAKN_00563 3.3e-158 ytxK 2.1.1.72 L N-6 DNA Methylase
IINDBAKN_00564 9.5e-225 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
IINDBAKN_00565 2e-109 S Calcineurin-like phosphoesterase
IINDBAKN_00566 1.2e-97 yutD S Protein of unknown function (DUF1027)
IINDBAKN_00567 6.6e-142 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
IINDBAKN_00568 5.7e-25 S Protein of unknown function (DUF1461)
IINDBAKN_00569 2.9e-103 dedA S SNARE-like domain protein
IINDBAKN_00570 9.8e-77
IINDBAKN_00590 9.3e-17 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
IINDBAKN_00591 1.7e-69 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
IINDBAKN_00592 5.3e-114 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
IINDBAKN_00593 3.2e-205 coiA 3.6.4.12 S Competence protein
IINDBAKN_00594 1.8e-113 yjbH Q Thioredoxin
IINDBAKN_00595 6e-123 yjbM 2.7.6.5 S RelA SpoT domain protein
IINDBAKN_00596 1e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
IINDBAKN_00597 8.2e-173 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
IINDBAKN_00598 1.4e-195 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
IINDBAKN_00599 1.3e-162 rrmA 2.1.1.187 H Methyltransferase
IINDBAKN_00600 6.7e-95 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
IINDBAKN_00601 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
IINDBAKN_00602 1.2e-07 S Protein of unknown function (DUF4044)
IINDBAKN_00603 5.8e-58
IINDBAKN_00604 5.6e-79 mraZ K Belongs to the MraZ family
IINDBAKN_00605 1.1e-172 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
IINDBAKN_00606 7e-09 ftsL D Cell division protein FtsL
IINDBAKN_00607 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
IINDBAKN_00608 9.1e-178 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
IINDBAKN_00609 4.3e-261 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
IINDBAKN_00610 2.8e-202 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
IINDBAKN_00611 8.4e-151 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
IINDBAKN_00612 3.2e-224 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
IINDBAKN_00613 2.6e-220 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
IINDBAKN_00614 2.5e-75 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
IINDBAKN_00615 6.8e-41 yggT S YGGT family
IINDBAKN_00616 2.3e-64 ylmH S S4 domain protein
IINDBAKN_00617 2.8e-51 ylmH S S4 domain protein
IINDBAKN_00618 4.8e-112 divIVA D DivIVA domain protein
IINDBAKN_00620 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
IINDBAKN_00621 1.2e-32 cspB K Cold shock protein
IINDBAKN_00622 2.7e-97 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
IINDBAKN_00624 4.6e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
IINDBAKN_00625 3.4e-58 XK27_04120 S Putative amino acid metabolism
IINDBAKN_00626 1.1e-222 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
IINDBAKN_00627 4.5e-82 tlpA2 L Transposase IS200 like
IINDBAKN_00628 2e-233 L transposase, IS605 OrfB family
IINDBAKN_00629 3.9e-306 S amidohydrolase
IINDBAKN_00630 4e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
IINDBAKN_00631 1.2e-120 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
IINDBAKN_00632 7.1e-124 S Repeat protein
IINDBAKN_00633 0.0 recD 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
IINDBAKN_00634 2.5e-178 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
IINDBAKN_00635 4.2e-74 spx4 1.20.4.1 P ArsC family
IINDBAKN_00636 1.8e-189 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic
IINDBAKN_00637 2.2e-31 ykzG S Belongs to the UPF0356 family
IINDBAKN_00638 1.5e-74
IINDBAKN_00639 7.5e-103 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
IINDBAKN_00640 2.4e-49 yktA S Belongs to the UPF0223 family
IINDBAKN_00641 9e-136 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
IINDBAKN_00642 0.0 typA T GTP-binding protein TypA
IINDBAKN_00643 4.4e-214 ftsW D Belongs to the SEDS family
IINDBAKN_00644 1.4e-47 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
IINDBAKN_00645 1.3e-99 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
IINDBAKN_00646 9.6e-89 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
IINDBAKN_00647 6.7e-198 ylbL T Belongs to the peptidase S16 family
IINDBAKN_00648 1.3e-90 comEA L Competence protein ComEA
IINDBAKN_00649 3.4e-88 comEB 3.5.4.12 F ComE operon protein 2
IINDBAKN_00650 3.1e-176 comEC S Competence protein ComEC
IINDBAKN_00651 3.5e-238 comEC S Competence protein ComEC
IINDBAKN_00652 1.8e-184 holA 2.7.7.7 L DNA polymerase III delta subunit
IINDBAKN_00653 3.6e-246 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
IINDBAKN_00654 2.3e-35 rpsT J Binds directly to 16S ribosomal RNA
IINDBAKN_00655 4.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
IINDBAKN_00656 2.8e-44 L Transposase IS200 like
IINDBAKN_00657 9.3e-225 L transposase, IS605 OrfB family
IINDBAKN_00658 5.6e-36 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
IINDBAKN_00659 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
IINDBAKN_00660 4.6e-163 S Tetratricopeptide repeat
IINDBAKN_00661 1.9e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
IINDBAKN_00662 5.7e-215 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
IINDBAKN_00663 1.5e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
IINDBAKN_00664 2.3e-107 engB D Necessary for normal cell division and for the maintenance of normal septation
IINDBAKN_00665 8.3e-53 MA20_27270 S mazG nucleotide pyrophosphohydrolase
IINDBAKN_00667 1.7e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
IINDBAKN_00668 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
IINDBAKN_00669 6.7e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
IINDBAKN_00670 7e-175 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
IINDBAKN_00671 1.9e-155 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
IINDBAKN_00672 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
IINDBAKN_00673 2.4e-95 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
IINDBAKN_00674 9.5e-247 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
IINDBAKN_00675 8.6e-187 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IINDBAKN_00676 1.2e-151 tesE Q hydratase
IINDBAKN_00677 1.1e-80 tlpA2 L Transposase IS200 like
IINDBAKN_00678 3.9e-237 L transposase, IS605 OrfB family
IINDBAKN_00679 1.5e-97 ywrO S Flavodoxin-like fold
IINDBAKN_00680 5.1e-44 S Protein conserved in bacteria
IINDBAKN_00681 8.9e-56 1.14.99.57 S Antibiotic biosynthesis monooxygenase
IINDBAKN_00682 2.1e-51 S Sugar efflux transporter for intercellular exchange
IINDBAKN_00683 1e-16 xre K Helix-turn-helix domain
IINDBAKN_00684 9.7e-200 gldA 1.1.1.6 C dehydrogenase
IINDBAKN_00685 3.9e-119 IQ Enoyl-(Acyl carrier protein) reductase
IINDBAKN_00686 9.8e-82 S Bacterial transferase hexapeptide (six repeats)
IINDBAKN_00687 2.1e-227 tnp L MULE transposase domain
IINDBAKN_00690 1.5e-82 tlpA2 L Transposase IS200 like
IINDBAKN_00691 2.1e-191 L transposase, IS605 OrfB family
IINDBAKN_00692 7.9e-227 tnp L MULE transposase domain
IINDBAKN_00693 8.9e-185 EGP Major facilitator Superfamily
IINDBAKN_00695 0.0 asnB 6.3.5.4 E Aluminium induced protein
IINDBAKN_00696 3.8e-81 tlpA2 L Transposase IS200 like
IINDBAKN_00697 1.9e-236 L transposase, IS605 OrfB family
IINDBAKN_00698 1.1e-09 surA 2.4.1.129, 3.4.16.4 GT51 S Rib/alpha-like repeat
IINDBAKN_00700 2.4e-16 hbd2 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
IINDBAKN_00701 3e-14
IINDBAKN_00702 6.7e-184 scrR3 K Transcriptional regulator, LacI family
IINDBAKN_00703 1.3e-78 F Nucleoside 2-deoxyribosyltransferase
IINDBAKN_00704 8.8e-89
IINDBAKN_00706 5.1e-190 L Belongs to the 'phage' integrase family
IINDBAKN_00707 1.8e-53
IINDBAKN_00709 3.7e-129 S Domain of unknown function (DUF4393)
IINDBAKN_00710 9.6e-14
IINDBAKN_00712 1.2e-31 S Bacterial PH domain
IINDBAKN_00713 2.1e-67
IINDBAKN_00714 4.8e-51 3.4.21.88 K Helix-turn-helix domain
IINDBAKN_00715 5.4e-144 K Phage regulatory protein
IINDBAKN_00717 1.4e-60 S Hypothetical protein (DUF2513)
IINDBAKN_00718 1.4e-10 S Domain of unknown function (DUF771)
IINDBAKN_00720 3.5e-21
IINDBAKN_00724 1.6e-124 recT L RecT family
IINDBAKN_00725 1.9e-150 pi112 3.6.4.12 L PDDEXK-like domain of unknown function (DUF3799)
IINDBAKN_00726 4.5e-94 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
IINDBAKN_00727 9e-26 L Psort location Cytoplasmic, score
IINDBAKN_00731 1.7e-15
IINDBAKN_00732 2.6e-32
IINDBAKN_00734 4e-46 L HNH nucleases
IINDBAKN_00735 7.2e-56 L Phage terminase, small subunit
IINDBAKN_00736 4.4e-277 S overlaps another CDS with the same product name
IINDBAKN_00738 1.5e-142 S Phage portal protein
IINDBAKN_00739 2.4e-66 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
IINDBAKN_00740 2.5e-129 S Phage capsid family
IINDBAKN_00741 5.1e-30 S Phage gp6-like head-tail connector protein
IINDBAKN_00742 1.8e-30 S Phage head-tail joining protein
IINDBAKN_00743 2e-33 S Bacteriophage HK97-gp10, putative tail-component
IINDBAKN_00744 2.5e-41 S Protein of unknown function (DUF806)
IINDBAKN_00745 2.3e-61 S Phage tail tube protein
IINDBAKN_00747 9.6e-165 M Phage tail tape measure protein TP901
IINDBAKN_00748 6.3e-74 S Phage tail protein
IINDBAKN_00749 3.4e-154 spr M Prophage endopeptidase tail
IINDBAKN_00750 7e-73
IINDBAKN_00751 3.1e-33 S GDSL-like Lipase/Acylhydrolase
IINDBAKN_00752 2.1e-45
IINDBAKN_00756 3.4e-27 hol S COG5546 Small integral membrane protein
IINDBAKN_00757 1.1e-90 3.5.1.28 M Glycosyl hydrolases family 25
IINDBAKN_00758 9.2e-39
IINDBAKN_00760 2.3e-251 G Major Facilitator Superfamily
IINDBAKN_00761 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
IINDBAKN_00762 4.7e-224 L Transposase
IINDBAKN_00765 1.7e-64 sdaAB 4.3.1.17 E Serine dehydratase beta chain
IINDBAKN_00766 6e-91 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
IINDBAKN_00767 5.3e-26 yitW S Iron-sulfur cluster assembly protein
IINDBAKN_00768 2.9e-08 Q Signal peptide protein, YSIRK family
IINDBAKN_00769 2.5e-61 UW LPXTG-motif cell wall anchor domain protein
IINDBAKN_00770 6.9e-43 UW LPXTG-motif cell wall anchor domain protein
IINDBAKN_00771 9.7e-87 yrjD S LUD domain
IINDBAKN_00772 1.4e-244 lutB C 4Fe-4S dicluster domain
IINDBAKN_00773 5.6e-122 lutA C Cysteine-rich domain
IINDBAKN_00774 7.1e-217 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
IINDBAKN_00775 4.2e-115 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
IINDBAKN_00776 2.4e-37 ynzC S UPF0291 protein
IINDBAKN_00777 2.7e-27 yneF S Uncharacterised protein family (UPF0154)
IINDBAKN_00778 3.3e-115 plsC 2.3.1.51 I Acyltransferase
IINDBAKN_00779 8e-137 yabB 2.1.1.223 L Methyltransferase small domain
IINDBAKN_00780 2.3e-47 yazA L GIY-YIG catalytic domain protein
IINDBAKN_00781 5e-142 rpsB J Belongs to the universal ribosomal protein uS2 family
IINDBAKN_00782 3.2e-153 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
IINDBAKN_00783 2.2e-68 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
IINDBAKN_00784 3.5e-42 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
IINDBAKN_00785 1.4e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
IINDBAKN_00786 5.9e-143 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
IINDBAKN_00787 1.8e-134 cdsA 2.7.7.41 I Belongs to the CDS family
IINDBAKN_00788 2e-233 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
IINDBAKN_00789 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
IINDBAKN_00790 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
IINDBAKN_00791 3.5e-216 argD 2.6.1.11, 2.6.1.17 E acetylornithine
IINDBAKN_00792 2.7e-137 argB 2.7.2.8 F Belongs to the acetylglutamate kinase family. ArgB subfamily
IINDBAKN_00793 3.7e-208 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
IINDBAKN_00794 4.2e-197 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
IINDBAKN_00795 4.7e-207 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
IINDBAKN_00796 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
IINDBAKN_00797 3.3e-83 rimP J Required for maturation of 30S ribosomal subunits
IINDBAKN_00798 1.1e-223 nusA K Participates in both transcription termination and antitermination
IINDBAKN_00799 1.4e-47 ylxR K Protein of unknown function (DUF448)
IINDBAKN_00800 3.2e-50 ylxQ J ribosomal protein
IINDBAKN_00801 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
IINDBAKN_00802 4.2e-59 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
IINDBAKN_00803 1.2e-166 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
IINDBAKN_00804 8.6e-184 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
IINDBAKN_00805 3e-246 EGP Major facilitator Superfamily
IINDBAKN_00806 2.4e-58 L Helix-turn-helix domain
IINDBAKN_00807 1.6e-149 L hmm pf00665
IINDBAKN_00808 9.3e-239 L transposase, IS605 OrfB family
IINDBAKN_00809 2.9e-81 tlpA2 L Transposase IS200 like
IINDBAKN_00810 1.1e-253 G Major Facilitator
IINDBAKN_00811 0.0 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
IINDBAKN_00812 3.2e-178 K Transcriptional regulator, LacI family
IINDBAKN_00813 3.7e-158 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
IINDBAKN_00814 4.6e-09
IINDBAKN_00815 2.7e-224 dhaT 1.1.1.1, 1.1.1.202 C Dehydrogenase
IINDBAKN_00816 1.3e-171 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
IINDBAKN_00817 8.8e-189 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
IINDBAKN_00818 1.5e-82 tlpA2 L Transposase IS200 like
IINDBAKN_00819 4.2e-236 L transposase, IS605 OrfB family
IINDBAKN_00820 5.4e-62
IINDBAKN_00821 6.4e-193 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
IINDBAKN_00822 5.6e-61 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
IINDBAKN_00823 0.0 dnaK O Heat shock 70 kDa protein
IINDBAKN_00824 4.2e-177 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
IINDBAKN_00825 1.2e-94 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
IINDBAKN_00826 1.6e-08 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
IINDBAKN_00827 1.6e-63 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
IINDBAKN_00828 2.9e-56 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
IINDBAKN_00829 1.1e-50 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
IINDBAKN_00830 1.9e-200 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
IINDBAKN_00831 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
IINDBAKN_00832 3.3e-09
IINDBAKN_00833 5.7e-112 3.1.3.73 G phosphoglycerate mutase
IINDBAKN_00834 3.9e-86 C aldo keto reductase
IINDBAKN_00835 8.3e-13 C aldo keto reductase
IINDBAKN_00836 8.3e-204 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
IINDBAKN_00837 4.8e-221 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IINDBAKN_00838 1.7e-267 K COG COG0846 NAD-dependent protein deacetylases, SIR2 family
IINDBAKN_00839 9.3e-80 K 2 iron, 2 sulfur cluster binding
IINDBAKN_00840 1.9e-80 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
IINDBAKN_00841 2e-227 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
IINDBAKN_00842 4.1e-107 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
IINDBAKN_00843 1e-201 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
IINDBAKN_00844 8.9e-62 T His Kinase A (phosphoacceptor) domain
IINDBAKN_00845 2e-52 T Transcriptional regulatory protein, C terminal
IINDBAKN_00846 3.8e-25 S ABC-type transport system involved in multi-copper enzyme maturation permease component
IINDBAKN_00847 4.8e-190 L Helix-turn-helix domain
IINDBAKN_00848 3.1e-220 iscS 2.8.1.7 E Aminotransferase class V
IINDBAKN_00850 1.4e-217 L transposase, IS605 OrfB family
IINDBAKN_00851 1.1e-80 tlpA2 L Transposase IS200 like
IINDBAKN_00852 1.1e-236 L transposase, IS605 OrfB family
IINDBAKN_00853 8.5e-201 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
IINDBAKN_00854 8.8e-102 P Cadmium resistance transporter
IINDBAKN_00855 3.2e-116 S Protein of unknown function (DUF554)
IINDBAKN_00856 5.4e-103 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
IINDBAKN_00857 7.2e-145 P Belongs to the nlpA lipoprotein family
IINDBAKN_00858 1.5e-97 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
IINDBAKN_00859 2.5e-37 V CAAX protease self-immunity
IINDBAKN_00860 6.6e-67 psiE S Phosphate-starvation-inducible E
IINDBAKN_00861 3.4e-149 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
IINDBAKN_00862 1.5e-112 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
IINDBAKN_00863 2.5e-144 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
IINDBAKN_00864 1.8e-139 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
IINDBAKN_00865 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
IINDBAKN_00866 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
IINDBAKN_00867 2.3e-93 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
IINDBAKN_00868 8.4e-35 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
IINDBAKN_00869 4.9e-37 S CRISPR-associated protein (Cas_Csn2)
IINDBAKN_00871 4e-12 aes I Hydrolase, alpha beta domain protein
IINDBAKN_00872 6e-35 aes I Carboxylesterase family
IINDBAKN_00874 5.4e-194 cscB G Major facilitator superfamily
IINDBAKN_00875 9.9e-173 cscA 3.2.1.26 GH32 G invertase
IINDBAKN_00876 7.4e-90 fruR3 K Transcriptional regulator, LacI family
IINDBAKN_00877 2.4e-79 arcD E Amino acid permease
IINDBAKN_00878 3.5e-33 arcD E Amino acid permease
IINDBAKN_00879 1.2e-25 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
IINDBAKN_00880 1.4e-95 S integral membrane protein
IINDBAKN_00881 1.5e-172 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
IINDBAKN_00883 1.7e-81 tlpA2 L Transposase IS200 like
IINDBAKN_00884 3.1e-86 L transposase, IS605 OrfB family
IINDBAKN_00885 2.4e-127 L transposase, IS605 OrfB family
IINDBAKN_00886 1.2e-54
IINDBAKN_00887 7.6e-177 prmA J Ribosomal protein L11 methyltransferase
IINDBAKN_00888 2.6e-135 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
IINDBAKN_00889 4.4e-58
IINDBAKN_00890 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
IINDBAKN_00891 2.4e-77 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
IINDBAKN_00892 2.6e-80 slyA K Transcriptional regulator
IINDBAKN_00893 2.1e-219 metC1 2.5.1.48, 4.4.1.8 E cystathionine
IINDBAKN_00894 3.3e-211 metB 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
IINDBAKN_00896 3.1e-67 yxeM ET Bacterial periplasmic substrate-binding proteins
IINDBAKN_00897 9.2e-47 yxeL K acetyltransferase
IINDBAKN_00898 2.2e-70 yxeN U ABC transporter, permease protein
IINDBAKN_00899 1.2e-78 yxeO 3.6.3.21 E ATPases associated with a variety of cellular activities
IINDBAKN_00900 1.7e-146 3.5.1.47 E Peptidase dimerisation domain
IINDBAKN_00901 6.5e-172 pcaB 4.3.2.2 F Adenylosuccinate lyase C-terminus
IINDBAKN_00902 1.5e-90 yxeQ S MmgE/PrpD family
IINDBAKN_00904 1.2e-112 papP P ABC transporter, permease protein
IINDBAKN_00905 5.7e-94 P ABC transporter permease
IINDBAKN_00906 3.9e-136 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
IINDBAKN_00907 3.1e-153 cjaA ET ABC transporter substrate-binding protein
IINDBAKN_00908 6.1e-137 IQ KR domain
IINDBAKN_00909 3.1e-212 hom1 1.1.1.3 E Homoserine dehydrogenase
IINDBAKN_00910 2.2e-159 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
IINDBAKN_00911 5.2e-246 mmuP E amino acid
IINDBAKN_00912 1.9e-172 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
IINDBAKN_00913 1.7e-167 yniA G Phosphotransferase enzyme family
IINDBAKN_00914 3.4e-172 lytH 3.5.1.28 M Ami_3
IINDBAKN_00915 4.7e-196 6.3.1.20 H Lipoate-protein ligase
IINDBAKN_00916 1e-248 hisS 6.1.1.21 J histidyl-tRNA synthetase
IINDBAKN_00917 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
IINDBAKN_00918 1.9e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
IINDBAKN_00919 9.7e-23 rpsU J Belongs to the bacterial ribosomal protein bS21 family
IINDBAKN_00920 2.1e-71 yqeY S YqeY-like protein
IINDBAKN_00921 1.4e-81 phoH T phosphate starvation-inducible protein PhoH
IINDBAKN_00922 1.8e-87 phoH T phosphate starvation-inducible protein PhoH
IINDBAKN_00923 1.1e-80 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
IINDBAKN_00924 1e-66 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
IINDBAKN_00925 8.7e-170 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
IINDBAKN_00926 2.3e-153 recO L Involved in DNA repair and RecF pathway recombination
IINDBAKN_00927 1.1e-186 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
IINDBAKN_00928 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
IINDBAKN_00929 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
IINDBAKN_00930 3.8e-207 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
IINDBAKN_00931 2e-98 IQ Enoyl-(Acyl carrier protein) reductase
IINDBAKN_00932 1.4e-128 EGP Major facilitator Superfamily
IINDBAKN_00933 1.1e-169 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
IINDBAKN_00934 5.1e-179 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
IINDBAKN_00935 7.7e-263 lysC 2.7.2.4 E Belongs to the aspartokinase family
IINDBAKN_00936 2.4e-253 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
IINDBAKN_00937 2.9e-72 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
IINDBAKN_00938 4.7e-221 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
IINDBAKN_00939 6.5e-112 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IINDBAKN_00940 1.7e-44 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IINDBAKN_00941 5.6e-141 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
IINDBAKN_00942 3.5e-219 patA 2.6.1.1 E Aminotransferase
IINDBAKN_00943 1.5e-197 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
IINDBAKN_00944 3.9e-227 ktrB P Potassium uptake protein
IINDBAKN_00945 1.5e-118 ktrA P domain protein
IINDBAKN_00946 1.7e-125 trmK 2.1.1.217 S SAM-dependent methyltransferase
IINDBAKN_00947 6.5e-156 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
IINDBAKN_00948 5.6e-236 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
IINDBAKN_00949 2.1e-241 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
IINDBAKN_00951 0.0 dnaE 2.7.7.7 L DNA polymerase
IINDBAKN_00952 8.3e-268 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
IINDBAKN_00953 1.6e-168 cvfB S S1 domain
IINDBAKN_00954 6e-160 xerD D recombinase XerD
IINDBAKN_00955 5.3e-68 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
IINDBAKN_00956 3.9e-142 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
IINDBAKN_00957 5e-102 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
IINDBAKN_00958 2.8e-131 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
IINDBAKN_00959 3.7e-81 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
IINDBAKN_00960 6e-199 ypbB 5.1.3.1 S Helix-turn-helix domain
IINDBAKN_00961 3.1e-278 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
IINDBAKN_00962 4.8e-30 M Lysin motif
IINDBAKN_00963 5.8e-118 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
IINDBAKN_00964 5.8e-209 rpsA 1.17.7.4 J Ribosomal protein S1
IINDBAKN_00965 2.8e-246 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
IINDBAKN_00966 4.4e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
IINDBAKN_00967 6.9e-234 S Tetratricopeptide repeat protein
IINDBAKN_00968 1.8e-164 xerD L Phage integrase, N-terminal SAM-like domain
IINDBAKN_00969 2.4e-223 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
IINDBAKN_00970 0.0 yfmR S ABC transporter, ATP-binding protein
IINDBAKN_00971 2.1e-190 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
IINDBAKN_00972 8.7e-95 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
IINDBAKN_00973 1.2e-109 hlyIII S protein, hemolysin III
IINDBAKN_00974 7.6e-152 DegV S EDD domain protein, DegV family
IINDBAKN_00975 9.4e-217 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase
IINDBAKN_00976 8.5e-108 cat S Bacterial transferase hexapeptide (six repeats)
IINDBAKN_00977 3.1e-167 ypmR E lipolytic protein G-D-S-L family
IINDBAKN_00978 7.1e-104 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
IINDBAKN_00979 3.1e-36 yozE S Belongs to the UPF0346 family
IINDBAKN_00980 1.1e-161 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
IINDBAKN_00981 1.2e-140 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
IINDBAKN_00982 3.6e-165 dprA LU DNA protecting protein DprA
IINDBAKN_00983 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
IINDBAKN_00984 2.5e-155 D DNA integration
IINDBAKN_00985 4e-172 lacX 5.1.3.3 G Aldose 1-epimerase
IINDBAKN_00986 2.8e-103 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
IINDBAKN_00987 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
IINDBAKN_00988 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
IINDBAKN_00989 5.2e-95 S Protein of unknown function (DUF1440)
IINDBAKN_00990 9.5e-172 ppaC 3.6.1.1 C inorganic pyrophosphatase
IINDBAKN_00991 2.3e-71 yqkB S Belongs to the HesB IscA family
IINDBAKN_00992 3.4e-76 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
IINDBAKN_00993 3.7e-93 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
IINDBAKN_00994 1.3e-81 yebR 1.8.4.14 T GAF domain-containing protein
IINDBAKN_00995 1.2e-244 U Belongs to the purine-cytosine permease (2.A.39) family
IINDBAKN_00996 8e-243 codA 3.5.4.1 F cytosine deaminase
IINDBAKN_00997 0.0 oppD EP Psort location Cytoplasmic, score
IINDBAKN_00999 1.2e-255 rarA L recombination factor protein RarA
IINDBAKN_01000 1.5e-118 S Protein of unknown function (DUF554)
IINDBAKN_01001 1.3e-61 yhjX P Major Facilitator Superfamily
IINDBAKN_01002 3.7e-171 yhjX P Major Facilitator Superfamily
IINDBAKN_01004 5e-18 lmrB EGP Major facilitator Superfamily
IINDBAKN_01005 2e-21 clcA P chloride
IINDBAKN_01006 1.7e-94 clcA P chloride
IINDBAKN_01007 1.8e-157 odh 1.5.1.28 C NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain
IINDBAKN_01008 1.2e-119 5.1.1.13 M racemase activity, acting on amino acids and derivatives
IINDBAKN_01009 4.1e-262 arcD E Amino acid permease
IINDBAKN_01010 4.5e-199 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
IINDBAKN_01011 4.6e-97 apt 2.4.2.22, 2.4.2.7 F Phosphoribosyl transferase domain
IINDBAKN_01012 1.4e-221 EGP Sugar (and other) transporter
IINDBAKN_01013 1.8e-145 1.4.1.1, 4.3.1.12 E Ornithine cyclodeaminase/mu-crystallin family
IINDBAKN_01014 3.8e-145 2.6.1.1 E Aminotransferase
IINDBAKN_01015 1.1e-55 2.6.1.1 E Aminotransferase
IINDBAKN_01018 8.9e-35 S Phage minor capsid protein 2
IINDBAKN_01019 5.7e-72 S Phage minor capsid protein 2
IINDBAKN_01020 1.3e-164 I alpha/beta hydrolase fold
IINDBAKN_01021 1.3e-96 K Acetyltransferase (GNAT) domain
IINDBAKN_01023 5.4e-159 S DUF218 domain
IINDBAKN_01024 2.8e-165 1.1.1.346 C Aldo keto reductase
IINDBAKN_01025 7.9e-77 hmpT S ECF-type riboflavin transporter, S component
IINDBAKN_01026 1.7e-151 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
IINDBAKN_01027 4.1e-37 icd 1.1.1.42 C Isocitrate/isopropylmalate dehydrogenase
IINDBAKN_01028 2.6e-83 icd 1.1.1.42 C Isocitrate/isopropylmalate dehydrogenase
IINDBAKN_01029 5.9e-88 icd 1.1.1.42 C Isocitrate/isopropylmalate dehydrogenase
IINDBAKN_01030 1.9e-81 ywkB S Membrane transport protein
IINDBAKN_01031 2.1e-202 xerS L Belongs to the 'phage' integrase family
IINDBAKN_01032 9.4e-180 pva3 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
IINDBAKN_01033 1.2e-196 4.4.1.8 E Aminotransferase, class I
IINDBAKN_01034 9.7e-205 L transposase, IS605 OrfB family
IINDBAKN_01035 6.3e-196 bdhA 1.1.1.303, 1.1.1.4 C Zinc-binding dehydrogenase
IINDBAKN_01036 2e-180 C Zinc-binding dehydrogenase
IINDBAKN_01037 3.1e-102 proW P ABC transporter, permease protein
IINDBAKN_01038 1.9e-141 proV E ABC transporter, ATP-binding protein
IINDBAKN_01039 3e-108 proWZ P ABC transporter permease
IINDBAKN_01040 1.7e-162 proX M ABC transporter, substrate-binding protein, QAT family
IINDBAKN_01041 2.8e-76 K Transcriptional regulator
IINDBAKN_01042 4.2e-74 O OsmC-like protein
IINDBAKN_01043 3.4e-46 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
IINDBAKN_01044 2.2e-25 C Flavodoxin
IINDBAKN_01045 6.5e-83 GM NmrA-like family
IINDBAKN_01046 3.3e-45 K transcriptional regulator
IINDBAKN_01047 7.9e-108 L Integrase
IINDBAKN_01048 2.7e-71 ydjP I Alpha/beta hydrolase family
IINDBAKN_01049 2.7e-78 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
IINDBAKN_01050 1.4e-35 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
IINDBAKN_01051 2.3e-239 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
IINDBAKN_01052 3.9e-146 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
IINDBAKN_01053 4.5e-35 citD C Covalent carrier of the coenzyme of citrate lyase
IINDBAKN_01054 3e-89 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
IINDBAKN_01055 4.5e-79 S Membrane transport protein
IINDBAKN_01056 6.7e-43 citR K sugar-binding domain protein
IINDBAKN_01057 1.1e-185 adhC 1.1.1.90 C Zn-dependent alcohol dehydrogenases, class III
IINDBAKN_01058 8.6e-10 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
IINDBAKN_01059 4.4e-32 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
IINDBAKN_01060 3e-147 sua5 2.7.7.87 J Telomere recombination
IINDBAKN_01061 1.1e-106 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
IINDBAKN_01062 7.1e-280 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
IINDBAKN_01063 4.8e-196 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
IINDBAKN_01064 9e-240 ydjE EGP Major facilitator Superfamily
IINDBAKN_01065 2e-127 yocS S Transporter
IINDBAKN_01066 4.7e-28 XK27_02560 S Pfam:DUF59
IINDBAKN_01067 2.6e-260 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
IINDBAKN_01068 7.5e-32 L Transposase and inactivated derivatives IS30 family
IINDBAKN_01069 1.9e-30 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
IINDBAKN_01071 8.5e-46 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
IINDBAKN_01072 2.2e-33 ydjP I Alpha/beta hydrolase family
IINDBAKN_01073 1e-24 ydjP I Alpha/beta hydrolase family
IINDBAKN_01074 4e-26 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
IINDBAKN_01076 2e-16 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
IINDBAKN_01077 5.4e-36 citG 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
IINDBAKN_01078 5.1e-63 ydiI Q Thioesterase superfamily
IINDBAKN_01079 5.3e-158 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
IINDBAKN_01080 3.4e-277 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
IINDBAKN_01081 8.6e-218 G Transporter, major facilitator family protein
IINDBAKN_01082 4.7e-207 adh 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
IINDBAKN_01083 1.1e-71 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
IINDBAKN_01084 9.1e-114 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
IINDBAKN_01085 1.3e-168 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
IINDBAKN_01086 2.5e-40 gcvR T Belongs to the UPF0237 family
IINDBAKN_01087 1e-243 XK27_08635 S UPF0210 protein
IINDBAKN_01088 8e-179 yobV1 K WYL domain
IINDBAKN_01089 5.4e-68 S pyridoxamine 5-phosphate
IINDBAKN_01090 4.1e-33
IINDBAKN_01092 3.7e-63
IINDBAKN_01093 6.8e-114 yicL EG EamA-like transporter family
IINDBAKN_01094 4.9e-65 S Domain of unknown function (DUF4352)
IINDBAKN_01095 0.0 1.3.5.4 C FAD binding domain
IINDBAKN_01096 8.6e-165 K LysR substrate binding domain
IINDBAKN_01097 9.1e-161 rssA S Phospholipase, patatin family
IINDBAKN_01098 1.9e-214 phbA 2.3.1.9 I Belongs to the thiolase family
IINDBAKN_01099 1.9e-179 S AI-2E family transporter
IINDBAKN_01100 4.5e-124 S membrane transporter protein
IINDBAKN_01101 3.2e-89 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
IINDBAKN_01102 2.9e-193 V Beta-lactamase
IINDBAKN_01103 1e-226
IINDBAKN_01105 7e-153 S Alpha/beta hydrolase of unknown function (DUF915)
IINDBAKN_01106 0.0 I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
IINDBAKN_01107 2.2e-165 fadB4 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
IINDBAKN_01108 1.2e-163 endA F DNA RNA non-specific endonuclease
IINDBAKN_01109 2.3e-267 pipD E Dipeptidase
IINDBAKN_01111 3e-254 yifK E Amino acid permease
IINDBAKN_01113 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
IINDBAKN_01114 9.2e-239 N Uncharacterized conserved protein (DUF2075)
IINDBAKN_01115 6.2e-154 L hmm pf00665
IINDBAKN_01116 6.2e-59 L Helix-turn-helix domain
IINDBAKN_01118 4.5e-79 ndk 2.7.4.6 F Belongs to the NDK family
IINDBAKN_01119 1.8e-98 padR K Virulence activator alpha C-term
IINDBAKN_01120 7.2e-228 tnp L MULE transposase domain
IINDBAKN_01121 9.7e-218 dapE 3.5.1.18 E Peptidase dimerisation domain
IINDBAKN_01122 3.4e-190 Q Imidazolonepropionase and related amidohydrolases
IINDBAKN_01123 4.5e-221 dap2 3.4.19.1 E Prolyl oligopeptidase family
IINDBAKN_01124 1.2e-227 tnp L MULE transposase domain
IINDBAKN_01125 8.6e-131 Q Imidazolonepropionase and related amidohydrolases
IINDBAKN_01126 3.2e-137 P Belongs to the ABC transporter superfamily
IINDBAKN_01127 1.4e-166 oppD P Belongs to the ABC transporter superfamily
IINDBAKN_01128 6.4e-131 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
IINDBAKN_01129 2e-145 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
IINDBAKN_01130 8.8e-274 E ABC transporter, substratebinding protein
IINDBAKN_01131 5.9e-194 tra L Transposase and inactivated derivatives, IS30 family
IINDBAKN_01132 1.5e-222 L Transposase
IINDBAKN_01133 6.6e-53 padC Q Phenolic acid decarboxylase
IINDBAKN_01135 5.6e-219 I transferase activity, transferring acyl groups other than amino-acyl groups
IINDBAKN_01137 6.3e-143 ET Bacterial periplasmic substrate-binding proteins
IINDBAKN_01138 1.8e-158 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
IINDBAKN_01139 7.2e-225 aadAT EK Aminotransferase, class I
IINDBAKN_01140 1.2e-16
IINDBAKN_01142 1e-31 higA K Helix-turn-helix XRE-family like proteins
IINDBAKN_01143 1.1e-30 S Sugar efflux transporter for intercellular exchange
IINDBAKN_01144 1.2e-36 tdh 1.1.1.14 E Alcohol dehydrogenase GroES-like domain
IINDBAKN_01145 3.3e-23 tdh 1.1.1.14 C Zinc-binding dehydrogenase
IINDBAKN_01146 6.5e-38 tdh 1.1.1.14 C Zinc-binding dehydrogenase
IINDBAKN_01147 2.7e-260 guaD 3.5.4.3 F Amidohydrolase family
IINDBAKN_01148 2.7e-216 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
IINDBAKN_01151 3e-237 L transposase, IS605 OrfB family
IINDBAKN_01152 3.8e-81 tlpA2 L Transposase IS200 like
IINDBAKN_01153 3e-44 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
IINDBAKN_01154 3.1e-11 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
IINDBAKN_01155 6.8e-48 yrfB C NADH:flavin oxidoreductase / NADH oxidase family
IINDBAKN_01156 2.7e-88 rmeB K transcriptional regulator, MerR family
IINDBAKN_01157 1.2e-132 ybbM S Uncharacterised protein family (UPF0014)
IINDBAKN_01158 2.2e-111 ybbL S ABC transporter, ATP-binding protein
IINDBAKN_01159 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
IINDBAKN_01160 4.5e-33 S Protein of unknown function (DUF4256)
IINDBAKN_01163 9e-101 K DNA-templated transcription, initiation
IINDBAKN_01164 6e-20 L Transposase
IINDBAKN_01165 4.5e-177 L Transposase
IINDBAKN_01166 7.1e-88 L AlwI restriction endonuclease
IINDBAKN_01167 4.6e-226 dam 2.1.1.72 L D12 class N6 adenine-specific DNA methyltransferase
IINDBAKN_01169 1.1e-78 L Lactococcus lactis RepB C-terminus
IINDBAKN_01170 6.4e-45 L hmm pf00665
IINDBAKN_01171 1.8e-31 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
IINDBAKN_01172 8.3e-55 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
IINDBAKN_01173 4.9e-69 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
IINDBAKN_01174 7.3e-103 wecD3 K Acetyltransferase (GNAT) family
IINDBAKN_01175 0.0 ubiB S ABC1 family
IINDBAKN_01176 2.3e-130 1.14.12.17 C Oxidoreductase NAD-binding domain
IINDBAKN_01178 3.3e-169 GK ROK family
IINDBAKN_01179 3.9e-41
IINDBAKN_01180 4.2e-80 copY K Copper transport repressor CopY TcrY
IINDBAKN_01182 2.5e-147 XK26_04895
IINDBAKN_01183 9e-144 L 4.5 Transposon and IS
IINDBAKN_01184 1.6e-39 L Transposase
IINDBAKN_01185 3.7e-159 1.1.1.90 C Zn-dependent alcohol dehydrogenases, class III
IINDBAKN_01186 4.1e-60 L hmm pf00665
IINDBAKN_01187 1.6e-76 3.6.3.6 P ATPase, P-type transporting, HAD superfamily, subfamily IC
IINDBAKN_01188 1.5e-53 mutR K Transcriptional activator, Rgg GadR MutR family
IINDBAKN_01189 3.4e-106 mutR K Transcriptional activator, Rgg GadR MutR family
IINDBAKN_01190 2e-288 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
IINDBAKN_01191 3.2e-229 gntT EG Gluconate
IINDBAKN_01192 5.4e-181 K Transcriptional regulator, LacI family
IINDBAKN_01193 2.5e-61 yneR
IINDBAKN_01194 4.4e-222 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
IINDBAKN_01195 2.2e-96 V VanZ like family
IINDBAKN_01196 3.4e-09 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
IINDBAKN_01197 3.3e-55 tlpA2 L Transposase IS200 like
IINDBAKN_01198 5.4e-239 L transposase, IS605 OrfB family
IINDBAKN_01199 4.1e-64 yjcE P Sodium proton antiporter
IINDBAKN_01200 1.3e-75
IINDBAKN_01201 8.6e-184
IINDBAKN_01202 8.7e-130 narI 1.7.5.1 C Nitrate reductase
IINDBAKN_01203 4.1e-102 narJ C Nitrate reductase delta subunit
IINDBAKN_01204 0.0 narH 1.7.5.1 C Respiratory nitrate reductase beta C-terminal
IINDBAKN_01205 0.0 narG 1.7.5.1 C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
IINDBAKN_01206 1.4e-189 moeB 2.7.7.73, 2.7.7.80 H ThiF family
IINDBAKN_01207 2.5e-86 moaB 2.7.7.75 H May be involved in the biosynthesis of molybdopterin
IINDBAKN_01208 1.6e-22 moeA 2.10.1.1 H MoeA N-terminal region (domain I and II)
IINDBAKN_01209 1.8e-184 moeA 2.10.1.1 H MoeA N-terminal region (domain I and II)
IINDBAKN_01210 4.6e-84 moaC 4.6.1.17 H Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
IINDBAKN_01211 1.1e-98 mobA 2.7.7.77 H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
IINDBAKN_01212 4.2e-40
IINDBAKN_01213 5.4e-77 nreA T GAF domain
IINDBAKN_01214 1.6e-183 comP 2.7.13.3 F Sensor histidine kinase
IINDBAKN_01215 3e-116 nreC K PFAM regulatory protein LuxR
IINDBAKN_01216 1.2e-39
IINDBAKN_01217 3.3e-183
IINDBAKN_01218 2e-169 hepT 2.5.1.30, 2.5.1.90 H geranyltranstransferase activity
IINDBAKN_01220 4.6e-134 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
IINDBAKN_01221 2.9e-162 hipB K Helix-turn-helix
IINDBAKN_01222 1.5e-58 yitW S Iron-sulfur cluster assembly protein
IINDBAKN_01223 3.6e-216 narK P Major Facilitator Superfamily
IINDBAKN_01224 3.5e-196 moaA 4.1.99.22 H Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
IINDBAKN_01225 6.4e-35 moaD 2.8.1.12 H ThiS family
IINDBAKN_01226 2.2e-72 moaE 2.8.1.12 H MoaE protein
IINDBAKN_01227 1.5e-170 fecD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
IINDBAKN_01228 2.2e-142 fecE 3.6.3.34 HP AAA domain, putative AbiEii toxin, Type IV TA system
IINDBAKN_01229 1.5e-228 ndh 1.6.99.3 C NADH dehydrogenase
IINDBAKN_01230 8e-54 yitW S Iron-sulfur cluster assembly protein
IINDBAKN_01231 6.1e-19 M1-755 S Domain of unknown function (DUF1858)
IINDBAKN_01232 9.5e-258 XK27_04775 S PAS domain
IINDBAKN_01233 1.6e-141 EG EamA-like transporter family
IINDBAKN_01234 6.1e-183 fecB P Periplasmic binding protein
IINDBAKN_01235 1.1e-272 sufB O assembly protein SufB
IINDBAKN_01236 6.4e-84 nifU C SUF system FeS assembly protein, NifU family
IINDBAKN_01237 6.8e-234 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
IINDBAKN_01238 4.5e-244 sufD O FeS assembly protein SufD
IINDBAKN_01239 8.5e-145 sufC O FeS assembly ATPase SufC
IINDBAKN_01240 1.4e-33 feoA P FeoA domain
IINDBAKN_01241 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
IINDBAKN_01242 6.7e-23 S Virus attachment protein p12 family
IINDBAKN_01243 1.2e-155 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
IINDBAKN_01244 1.6e-177 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
IINDBAKN_01245 4.3e-183 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IINDBAKN_01246 7.1e-217 aspB E DegT/DnrJ/EryC1/StrS aminotransferase family
IINDBAKN_01247 8.7e-90 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
IINDBAKN_01248 6.9e-198 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
IINDBAKN_01249 1.5e-236 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
IINDBAKN_01250 1.1e-103
IINDBAKN_01251 6.7e-215 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
IINDBAKN_01252 7.6e-13 pheA 1.3.1.12, 2.3.1.79, 4.2.1.51, 5.4.99.5 E Chorismate mutase type II
IINDBAKN_01253 4.1e-212 ydiN G Major Facilitator Superfamily
IINDBAKN_01254 1.2e-79 dtpT U amino acid peptide transporter
IINDBAKN_01255 3.2e-144 dtpT U amino acid peptide transporter
IINDBAKN_01258 6.6e-153 S Sucrose-6F-phosphate phosphohydrolase
IINDBAKN_01259 4.6e-69 1.6.5.2 GM NAD(P)H-binding
IINDBAKN_01260 2.1e-241 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
IINDBAKN_01261 1.6e-157 S Alpha beta hydrolase
IINDBAKN_01262 7.7e-237 lmrB EGP Major facilitator Superfamily
IINDBAKN_01264 0.0 S Bacterial membrane protein YfhO
IINDBAKN_01265 1.9e-11
IINDBAKN_01266 5.1e-49
IINDBAKN_01267 0.0 kup P Transport of potassium into the cell
IINDBAKN_01269 1.7e-282 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
IINDBAKN_01270 5.4e-26 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
IINDBAKN_01271 0.0 yjbQ P TrkA C-terminal domain protein
IINDBAKN_01272 4.8e-276 pipD E Dipeptidase
IINDBAKN_01273 3.9e-162 S Alpha/beta hydrolase of unknown function (DUF915)
IINDBAKN_01274 1.8e-240 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
IINDBAKN_01275 5.4e-43 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
IINDBAKN_01276 4.5e-168 T Calcineurin-like phosphoesterase superfamily domain
IINDBAKN_01277 4.3e-160 EGP Major facilitator Superfamily
IINDBAKN_01278 1.3e-200 mdtG EGP Major facilitator Superfamily
IINDBAKN_01279 5.3e-251 yhdP S Transporter associated domain
IINDBAKN_01280 5.2e-73 naiP EGP Major facilitator Superfamily
IINDBAKN_01281 2.3e-128 naiP EGP Major facilitator Superfamily
IINDBAKN_01282 6.2e-98 K LysR substrate binding domain protein
IINDBAKN_01283 9.3e-214 E GDSL-like Lipase/Acylhydrolase family
IINDBAKN_01284 2.3e-195 lplA 6.3.1.20 H Lipoate-protein ligase
IINDBAKN_01285 6.9e-259 lpdA 1.8.1.4 C Dehydrogenase
IINDBAKN_01286 1e-203 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
IINDBAKN_01287 5.8e-180 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
IINDBAKN_01288 4.8e-183 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
IINDBAKN_01289 7.3e-55 yphJ 4.1.1.44 S decarboxylase
IINDBAKN_01290 2.8e-54 azlD E Branched-chain amino acid transport
IINDBAKN_01291 5.4e-119 azlC E azaleucine resistance protein AzlC
IINDBAKN_01292 1.2e-285 thrC 4.2.3.1 E Threonine synthase
IINDBAKN_01293 3.5e-233 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
IINDBAKN_01294 8e-157 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
IINDBAKN_01295 3.5e-99 K Acetyltransferase (GNAT) domain
IINDBAKN_01296 5.3e-113 ylbE GM NAD(P)H-binding
IINDBAKN_01297 1.5e-118 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
IINDBAKN_01298 3.1e-133 S Belongs to the UPF0246 family
IINDBAKN_01299 1.9e-86
IINDBAKN_01300 3.2e-161 degV S EDD domain protein, DegV family
IINDBAKN_01301 0.0 FbpA K Fibronectin-binding protein
IINDBAKN_01302 6.1e-111 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
IINDBAKN_01303 3e-226 tnp L MULE transposase domain
IINDBAKN_01304 1.7e-185 arsB 1.20.4.1 P Sodium Bile acid symporter family
IINDBAKN_01305 3.8e-56 arsR K helix_turn_helix, Arsenical Resistance Operon Repressor
IINDBAKN_01306 1e-215 tra L Transposase and inactivated derivatives, IS30 family
IINDBAKN_01307 3.4e-23 S Enoyl-(Acyl carrier protein) reductase
IINDBAKN_01308 6.4e-173 K Bacterial regulatory helix-turn-helix protein, lysR family
IINDBAKN_01309 4.4e-120 cah 4.2.1.1 P Eukaryotic-type carbonic anhydrase
IINDBAKN_01310 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
IINDBAKN_01311 3.6e-207 carA 6.3.5.5 F Belongs to the CarA family
IINDBAKN_01312 9e-175 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
IINDBAKN_01313 3e-75 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
IINDBAKN_01314 1.7e-70 esbA S Family of unknown function (DUF5322)
IINDBAKN_01315 3.1e-71 rnhA 3.1.26.4 L Ribonuclease HI
IINDBAKN_01316 2.8e-108 XK27_02070 S Nitroreductase family
IINDBAKN_01317 4e-156 yckB ET Belongs to the bacterial solute-binding protein 3 family
IINDBAKN_01318 8.5e-215 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
IINDBAKN_01319 6.3e-72 F Hydrolase, NUDIX family
IINDBAKN_01320 8.9e-212 S Type IV secretion-system coupling protein DNA-binding domain
IINDBAKN_01321 3.1e-297 tetP J elongation factor G
IINDBAKN_01322 6.9e-69 tetP J elongation factor G
IINDBAKN_01323 4.6e-58 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
IINDBAKN_01324 6e-111 ypsA S Belongs to the UPF0398 family
IINDBAKN_01325 1.6e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
IINDBAKN_01326 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
IINDBAKN_01327 1.1e-159 EG EamA-like transporter family
IINDBAKN_01328 3.7e-193 C Aldo keto reductase family protein
IINDBAKN_01329 1.3e-121 ypuA S Protein of unknown function (DUF1002)
IINDBAKN_01330 4.7e-134 dnaD L DnaD domain protein
IINDBAKN_01331 2.1e-257 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
IINDBAKN_01332 1.6e-88 ypmB S Protein conserved in bacteria
IINDBAKN_01333 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
IINDBAKN_01334 9.9e-169 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
IINDBAKN_01335 4.8e-182 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
IINDBAKN_01336 9.5e-211 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
IINDBAKN_01337 4.5e-205 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
IINDBAKN_01338 4.8e-210 pstB 3.6.3.27 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
IINDBAKN_01339 1.4e-223 L Transposase
IINDBAKN_01340 4.8e-273 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
IINDBAKN_01341 1e-153 yitU 3.1.3.104 S hydrolase
IINDBAKN_01342 1.4e-167 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
IINDBAKN_01343 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
IINDBAKN_01344 8.7e-209 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
IINDBAKN_01345 4.7e-246 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
IINDBAKN_01346 1.2e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
IINDBAKN_01347 1.3e-56 ycsI S Protein of unknown function (DUF1445)
IINDBAKN_01348 0.0 gtfC 2.4.1.5 GH13 G Glycosyl hydrolase family 70
IINDBAKN_01350 2.1e-58 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
IINDBAKN_01351 2.2e-260 yfnA E Amino Acid
IINDBAKN_01352 2.9e-142 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
IINDBAKN_01353 2.1e-76 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
IINDBAKN_01354 5e-38 ylqC S Belongs to the UPF0109 family
IINDBAKN_01355 2.9e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
IINDBAKN_01356 1.1e-122 phoU P Plays a role in the regulation of phosphate uptake
IINDBAKN_01357 2e-135 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
IINDBAKN_01358 5.5e-153 pstA P Phosphate transport system permease protein PstA
IINDBAKN_01359 8.1e-152 pstC P probably responsible for the translocation of the substrate across the membrane
IINDBAKN_01360 5.1e-159 pstS P Phosphate
IINDBAKN_01361 9.8e-129 K Transcriptional regulatory protein, C-terminal domain protein
IINDBAKN_01362 2.7e-21
IINDBAKN_01363 2.1e-235 L transposase, IS605 OrfB family
IINDBAKN_01364 1.3e-81 tlpA2 L Transposase IS200 like
IINDBAKN_01365 7.7e-61
IINDBAKN_01367 2.6e-245 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
IINDBAKN_01368 1.1e-56 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
IINDBAKN_01369 2.5e-180 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
IINDBAKN_01370 0.0 smc D Required for chromosome condensation and partitioning
IINDBAKN_01371 4e-130 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
IINDBAKN_01372 4.5e-36 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
IINDBAKN_01373 2.8e-164 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
IINDBAKN_01374 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
IINDBAKN_01375 1.7e-304 yloV S DAK2 domain fusion protein YloV
IINDBAKN_01376 3.6e-58 asp S Asp23 family, cell envelope-related function
IINDBAKN_01377 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
IINDBAKN_01378 5.5e-58 thiN 2.7.6.2 H thiamine pyrophosphokinase
IINDBAKN_01379 1e-35 thiN 2.7.6.2 H thiamine pyrophosphokinase
IINDBAKN_01380 1.1e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
IINDBAKN_01381 3.1e-164 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
IINDBAKN_01382 0.0 KLT serine threonine protein kinase
IINDBAKN_01383 2.2e-131 stp 3.1.3.16 T phosphatase
IINDBAKN_01384 2e-247 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
IINDBAKN_01385 2.7e-174 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
IINDBAKN_01386 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
IINDBAKN_01387 6.6e-221 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
IINDBAKN_01388 3.2e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
IINDBAKN_01389 3.9e-113 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
IINDBAKN_01390 1.9e-15
IINDBAKN_01391 6.9e-189 L Helix-turn-helix domain
IINDBAKN_01392 8.3e-307 recN L May be involved in recombinational repair of damaged DNA
IINDBAKN_01393 6.2e-76 argR K Regulates arginine biosynthesis genes
IINDBAKN_01394 1.2e-100 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
IINDBAKN_01395 2.1e-28 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
IINDBAKN_01396 3.6e-157 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
IINDBAKN_01397 1e-18 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
IINDBAKN_01398 5.1e-257 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
IINDBAKN_01399 2.6e-160 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
IINDBAKN_01400 7.5e-68 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
IINDBAKN_01401 4.1e-72 yqhY S Asp23 family, cell envelope-related function
IINDBAKN_01402 2e-205 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
IINDBAKN_01403 7.1e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
IINDBAKN_01404 9e-53 ysxB J Cysteine protease Prp
IINDBAKN_01405 5.2e-50 rplU J This protein binds to 23S rRNA in the presence of protein L20
IINDBAKN_01406 9.6e-115 K Transcriptional regulator
IINDBAKN_01408 5.6e-92 dut S Protein conserved in bacteria
IINDBAKN_01409 5.4e-178
IINDBAKN_01410 2.2e-149
IINDBAKN_01411 4.7e-13
IINDBAKN_01412 7.1e-261 glnA 6.3.1.2 E glutamine synthetase
IINDBAKN_01413 8.5e-173 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
IINDBAKN_01414 4.8e-24 WQ51_02665 S Protein of unknown function (DUF3042)
IINDBAKN_01415 1.5e-71 yqhL P Rhodanese-like protein
IINDBAKN_01416 7e-178 glk 2.7.1.2 G Glucokinase
IINDBAKN_01417 9.6e-36 yqgQ S Bacterial protein of unknown function (DUF910)
IINDBAKN_01418 1.5e-104 gluP 3.4.21.105 S Peptidase, S54 family
IINDBAKN_01419 9.2e-98 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
IINDBAKN_01420 3.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
IINDBAKN_01421 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
IINDBAKN_01422 0.0 S membrane
IINDBAKN_01423 2.2e-79 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
IINDBAKN_01424 1.4e-116 udk 2.7.1.48 F Cytidine monophosphokinase
IINDBAKN_01425 2.3e-167 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
IINDBAKN_01426 2.5e-283 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
IINDBAKN_01427 5.1e-198 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
IINDBAKN_01428 7.8e-60 yodB K Transcriptional regulator, HxlR family
IINDBAKN_01429 7.6e-91 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
IINDBAKN_01430 1.2e-141 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
IINDBAKN_01431 2e-45 acyP 3.6.1.7 C Belongs to the acylphosphatase family
IINDBAKN_01432 1e-141 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
IINDBAKN_01433 1.1e-68 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
IINDBAKN_01434 4.7e-233 V MatE
IINDBAKN_01435 9e-281 arlS 2.7.13.3 T Histidine kinase
IINDBAKN_01436 5.6e-121 K response regulator
IINDBAKN_01437 7.2e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
IINDBAKN_01438 1.2e-97 yceD S Uncharacterized ACR, COG1399
IINDBAKN_01439 1.7e-215 ylbM S Belongs to the UPF0348 family
IINDBAKN_01440 8.3e-142 yqeM Q Methyltransferase
IINDBAKN_01441 1.6e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
IINDBAKN_01442 1.2e-111 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
IINDBAKN_01443 7.1e-94 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
IINDBAKN_01444 2.6e-49 yhbY J RNA-binding protein
IINDBAKN_01445 3.3e-152 yqeH S Ribosome biogenesis GTPase YqeH
IINDBAKN_01446 7.6e-97 yqeG S HAD phosphatase, family IIIA
IINDBAKN_01447 1.6e-25 yoaK S Protein of unknown function (DUF1275)
IINDBAKN_01448 1.9e-19 yoaK S Protein of unknown function (DUF1275)
IINDBAKN_01449 6.6e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
IINDBAKN_01450 1.5e-26 rpmI J Belongs to the bacterial ribosomal protein bL35 family
IINDBAKN_01451 1.7e-85 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
IINDBAKN_01452 5.7e-172 dnaI L Primosomal protein DnaI
IINDBAKN_01453 3e-251 dnaB L replication initiation and membrane attachment
IINDBAKN_01454 8.5e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
IINDBAKN_01455 3.5e-106 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
IINDBAKN_01456 1.1e-161 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
IINDBAKN_01457 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
IINDBAKN_01458 6.5e-139 aroD S Serine hydrolase (FSH1)
IINDBAKN_01459 1.8e-114 ybhL S Belongs to the BI1 family
IINDBAKN_01460 1.4e-250 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
IINDBAKN_01461 2e-117 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
IINDBAKN_01462 6.5e-56 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
IINDBAKN_01463 5.1e-59 ytzB S Small secreted protein
IINDBAKN_01464 1.8e-124 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
IINDBAKN_01465 8.6e-210 ecsB U ABC transporter
IINDBAKN_01466 2e-132 ecsA V ABC transporter, ATP-binding protein
IINDBAKN_01468 3.9e-28 yvaO K Helix-turn-helix XRE-family like proteins
IINDBAKN_01469 3.6e-13 E IrrE N-terminal-like domain
IINDBAKN_01470 9.2e-42 2.7.11.1 NU Domain of unknown function (DUF5067)
IINDBAKN_01471 1.2e-222 L Transposase
IINDBAKN_01472 9e-74 L Phage integrase family
IINDBAKN_01473 9.1e-77 hit FG histidine triad
IINDBAKN_01475 3.1e-149 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
IINDBAKN_01476 3.3e-180 yhaM S Metal dependent phosphohydrolases with conserved 'HD' motif.
IINDBAKN_01477 9.8e-56 yheA S Belongs to the UPF0342 family
IINDBAKN_01478 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
IINDBAKN_01479 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
IINDBAKN_01481 1.7e-36
IINDBAKN_01483 7e-201 folP 2.5.1.15 H dihydropteroate synthase
IINDBAKN_01484 1.2e-106 xtp 2.5.1.15, 3.6.1.66 F Ham1 family
IINDBAKN_01485 9.8e-244 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
IINDBAKN_01486 3.1e-104 folE 2.7.6.3, 3.5.4.16 F GTP cyclohydrolase 1
IINDBAKN_01487 8.4e-93 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
IINDBAKN_01488 8.4e-63 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
IINDBAKN_01489 4e-119 S CAAX protease self-immunity
IINDBAKN_01490 3.2e-142 rbsR K Periplasmic binding proteins and sugar binding domain of LacI family
IINDBAKN_01491 2.3e-110
IINDBAKN_01492 8.6e-116 dck 2.7.1.74 F deoxynucleoside kinase
IINDBAKN_01493 1.1e-158 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
IINDBAKN_01494 4.2e-256 S Putative peptidoglycan binding domain
IINDBAKN_01495 5.1e-87 uspA T Belongs to the universal stress protein A family
IINDBAKN_01496 1.3e-273 pepV 3.5.1.18 E dipeptidase PepV
IINDBAKN_01497 3.2e-153 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
IINDBAKN_01498 1.8e-60 3.2.1.23 S Domain of unknown function DUF302
IINDBAKN_01499 3.6e-299 ytgP S Polysaccharide biosynthesis protein
IINDBAKN_01500 2.6e-42
IINDBAKN_01501 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
IINDBAKN_01502 5.4e-127 3.1.3.2, 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I Acid phosphatase homologues
IINDBAKN_01503 8.4e-224 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
IINDBAKN_01504 3.7e-140 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
IINDBAKN_01505 3e-210 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
IINDBAKN_01506 8.5e-51
IINDBAKN_01507 3.8e-96 tag 3.2.2.20 L glycosylase
IINDBAKN_01508 2.9e-244 EGP Major facilitator Superfamily
IINDBAKN_01509 1.6e-84 perR P Belongs to the Fur family
IINDBAKN_01510 2e-247 cycA E Amino acid permease
IINDBAKN_01511 4e-22
IINDBAKN_01514 3.5e-238 L transposase, IS605 OrfB family
IINDBAKN_01515 2.9e-81 tlpA2 L Transposase IS200 like
IINDBAKN_01516 2e-94 K Transcriptional regulator, TetR family
IINDBAKN_01517 3.7e-78 hsp O Belongs to the small heat shock protein (HSP20) family
IINDBAKN_01518 1.6e-85 ykhA 3.1.2.20 I Thioesterase superfamily
IINDBAKN_01519 8.6e-63 lytE M LysM domain protein
IINDBAKN_01520 2.7e-199 adh 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
IINDBAKN_01521 4.6e-236 F Permease
IINDBAKN_01522 2.7e-160 sufD O Uncharacterized protein family (UPF0051)
IINDBAKN_01523 5.3e-112 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
IINDBAKN_01524 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
IINDBAKN_01525 1.3e-109 XK27_05795 P ABC transporter permease
IINDBAKN_01526 2.4e-142 ET Bacterial periplasmic substrate-binding proteins
IINDBAKN_01538 9.8e-77
IINDBAKN_01541 9.7e-39 ykuJ S Protein of unknown function (DUF1797)
IINDBAKN_01542 1.1e-151 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
IINDBAKN_01543 1.5e-199 cpoA GT4 M Glycosyltransferase, group 1 family protein
IINDBAKN_01544 1.3e-229 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
IINDBAKN_01545 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
IINDBAKN_01546 1.4e-38 ptsH G phosphocarrier protein HPR
IINDBAKN_01548 0.0 clpE O Belongs to the ClpA ClpB family
IINDBAKN_01549 1.7e-128 3.6.1.13, 3.6.1.55 F NUDIX domain
IINDBAKN_01550 6.4e-110 pncA Q Isochorismatase family
IINDBAKN_01551 2e-266 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
IINDBAKN_01552 1.7e-97 S Pfam:DUF3816
IINDBAKN_01553 3e-141 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G MucBP domain
IINDBAKN_01554 7.1e-136 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
IINDBAKN_01555 1.4e-161 EG EamA-like transporter family
IINDBAKN_01556 1.2e-246 yxbA 6.3.1.12 S ATP-grasp enzyme
IINDBAKN_01558 1.2e-14
IINDBAKN_01559 1.6e-157 V ABC transporter, ATP-binding protein
IINDBAKN_01560 7.8e-64 gntR1 K Transcriptional regulator, GntR family
IINDBAKN_01561 8.9e-170 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
IINDBAKN_01562 1.2e-87 S Bacterial membrane protein, YfhO
IINDBAKN_01563 7e-103 glfT1 1.1.1.133 S Glycosyltransferase like family 2
IINDBAKN_01564 1.3e-95 M transferase activity, transferring glycosyl groups
IINDBAKN_01565 7.7e-307 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
IINDBAKN_01566 2e-164 ykoT GT2 M Glycosyl transferase family 2
IINDBAKN_01567 3.6e-141 yueF S AI-2E family transporter
IINDBAKN_01568 2.9e-160 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
IINDBAKN_01569 2.1e-09
IINDBAKN_01570 1.5e-63 M repeat protein
IINDBAKN_01571 2e-31 3.2.1.96, 3.5.1.28 GH73 M repeat protein
IINDBAKN_01573 1.2e-58 acmD M repeat protein
IINDBAKN_01574 1.2e-227 tnp L MULE transposase domain
IINDBAKN_01576 2.2e-71 S enterobacterial common antigen metabolic process
IINDBAKN_01577 6.4e-204 rfbX S Membrane protein involved in the export of O-antigen and teichoic acid
IINDBAKN_01578 2.5e-219 glf 5.4.99.9 M UDP-galactopyranose mutase
IINDBAKN_01579 4.5e-45 M biosynthesis protein
IINDBAKN_01580 5.5e-95 cps3F
IINDBAKN_01581 4.6e-148 cps1D M Domain of unknown function (DUF4422)
IINDBAKN_01582 1.1e-118 rfbP M Bacterial sugar transferase
IINDBAKN_01583 1.4e-147 recX 2.4.1.337 GT4 S Regulatory protein RecX
IINDBAKN_01584 1.3e-07
IINDBAKN_01585 3.8e-31 S Protein of unknown function (DUF2922)
IINDBAKN_01586 9.2e-140 yihY S Belongs to the UPF0761 family
IINDBAKN_01587 0.0 XK27_08315 M Sulfatase
IINDBAKN_01588 5.9e-168 map 3.4.11.18 E Methionine Aminopeptidase
IINDBAKN_01589 8.5e-78 fld C Flavodoxin
IINDBAKN_01590 3e-75 gtcA S Teichoic acid glycosylation protein
IINDBAKN_01592 8.9e-232 yfmL 3.6.4.13 L DEAD DEAH box helicase
IINDBAKN_01593 1.3e-190 mocA S Oxidoreductase
IINDBAKN_01594 1.9e-62 S Domain of unknown function (DUF4828)
IINDBAKN_01595 5.7e-103 yvdD 3.2.2.10 S Belongs to the LOG family
IINDBAKN_01596 5.6e-161 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
IINDBAKN_01597 6.5e-287 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
IINDBAKN_01598 8e-140 S NADPH-dependent FMN reductase
IINDBAKN_01599 2.3e-33 yneR S Belongs to the HesB IscA family
IINDBAKN_01600 2.8e-304 ybiT S ABC transporter, ATP-binding protein
IINDBAKN_01601 2e-85 dps P Belongs to the Dps family
IINDBAKN_01602 1.3e-104
IINDBAKN_01603 1e-152 brpA K Cell envelope-like function transcriptional attenuator common domain protein
IINDBAKN_01605 1.4e-101 K helix_turn_helix multiple antibiotic resistance protein
IINDBAKN_01606 1.9e-63 fsr EGP Major Facilitator Superfamily
IINDBAKN_01607 6.2e-47 fsr EGP Major Facilitator Superfamily
IINDBAKN_01608 2.3e-98 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
IINDBAKN_01609 3.3e-101 S CAAX protease self-immunity
IINDBAKN_01611 8.2e-120 Q Methyltransferase domain
IINDBAKN_01612 8.6e-91 1.5.1.40 S NADP oxidoreductase coenzyme F420-dependent
IINDBAKN_01613 2.8e-51 K 2 iron, 2 sulfur cluster binding
IINDBAKN_01614 0.0 mco Q Multicopper oxidase
IINDBAKN_01615 1.4e-89 S Aminoacyl-tRNA editing domain
IINDBAKN_01616 5.3e-75 ddaH 3.5.3.18 E Amidinotransferase
IINDBAKN_01618 7.8e-194 nhaC C Na H antiporter NhaC
IINDBAKN_01619 7.9e-143 S Oxidoreductase family, NAD-binding Rossmann fold
IINDBAKN_01622 8.2e-186 S Phosphotransferase system, EIIC
IINDBAKN_01623 8.4e-159 L hmm pf00665
IINDBAKN_01624 1.2e-263 npr 1.11.1.1 C NADH oxidase
IINDBAKN_01625 1.6e-39 L Transposase
IINDBAKN_01626 9e-144 L 4.5 Transposon and IS
IINDBAKN_01627 2.9e-19 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
IINDBAKN_01628 1.9e-46 L Transposase
IINDBAKN_01629 3.4e-171 L Integrase core domain
IINDBAKN_01630 6.4e-90 L Transposase
IINDBAKN_01631 1.8e-113 flp 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
IINDBAKN_01632 5.4e-46 D Di-iron-containing protein involved in the repair of iron-sulfur clusters
IINDBAKN_01633 5.6e-33 copZ P Heavy-metal-associated domain
IINDBAKN_01634 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
IINDBAKN_01635 1.2e-42
IINDBAKN_01636 5.2e-212 tra L Transposase and inactivated derivatives, IS30 family
IINDBAKN_01637 1.1e-49 K TRANSCRIPTIONal
IINDBAKN_01638 2.4e-264 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
IINDBAKN_01639 1.8e-187 yegS 2.7.1.107 G Lipid kinase
IINDBAKN_01640 1e-273 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
IINDBAKN_01641 3.6e-274 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
IINDBAKN_01642 2.1e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
IINDBAKN_01643 5.8e-168 camS S sex pheromone
IINDBAKN_01644 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
IINDBAKN_01645 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
IINDBAKN_01646 2e-219 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
IINDBAKN_01647 1.1e-101 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
IINDBAKN_01648 2.2e-108 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
IINDBAKN_01649 1.2e-138 IQ reductase
IINDBAKN_01650 3.5e-189 S interspecies interaction between organisms
IINDBAKN_01651 1.5e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
IINDBAKN_01652 2.6e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
IINDBAKN_01653 2.2e-145 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
IINDBAKN_01654 1.4e-139 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
IINDBAKN_01655 2e-155 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
IINDBAKN_01656 4.6e-149 cbiO P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
IINDBAKN_01657 2.8e-61 rplQ J Ribosomal protein L17
IINDBAKN_01658 2e-169 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
IINDBAKN_01659 1e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
IINDBAKN_01660 9.5e-59 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
IINDBAKN_01661 1.1e-13 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
IINDBAKN_01662 2e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
IINDBAKN_01663 2.4e-121 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
IINDBAKN_01664 2.6e-236 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
IINDBAKN_01665 5.6e-66 rplO J Binds to the 23S rRNA
IINDBAKN_01666 8.5e-24 rpmD J Ribosomal protein L30
IINDBAKN_01667 2.6e-86 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
IINDBAKN_01668 3.9e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
IINDBAKN_01669 3e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
IINDBAKN_01670 1e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
IINDBAKN_01671 5.2e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
IINDBAKN_01672 4.2e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
IINDBAKN_01673 5.2e-50 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
IINDBAKN_01674 6.6e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
IINDBAKN_01675 6.5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
IINDBAKN_01676 4.2e-27 rpmC J Belongs to the universal ribosomal protein uL29 family
IINDBAKN_01677 6e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
IINDBAKN_01678 6.2e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
IINDBAKN_01679 2.2e-52 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
IINDBAKN_01680 8.4e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
IINDBAKN_01681 9.3e-150 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
IINDBAKN_01682 4.8e-45 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
IINDBAKN_01683 2.7e-106 rplD J Forms part of the polypeptide exit tunnel
IINDBAKN_01684 8.7e-119 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
IINDBAKN_01685 7.5e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
IINDBAKN_01686 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
IINDBAKN_01687 7.1e-83 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
IINDBAKN_01688 3.2e-71 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
IINDBAKN_01690 2.2e-09 pilD 3.4.23.43 NOU aspartic-type endopeptidase activity
IINDBAKN_01691 2.2e-213 ykiI
IINDBAKN_01692 5.6e-135 puuD S peptidase C26
IINDBAKN_01693 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
IINDBAKN_01694 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
IINDBAKN_01695 5.8e-106 K Bacterial regulatory proteins, tetR family
IINDBAKN_01696 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
IINDBAKN_01697 5.2e-67 ctsR K Belongs to the CtsR family
IINDBAKN_01698 2.3e-215 L transposase, IS605 OrfB family
IINDBAKN_01699 9.7e-194 adhP 1.1.1.1 C alcohol dehydrogenase
IINDBAKN_01700 4.3e-132 XK27_07210 6.1.1.6 S B3 4 domain
IINDBAKN_01701 2.7e-120 J 2'-5' RNA ligase superfamily
IINDBAKN_01703 4e-41 S ABC-type cobalt transport system, permease component
IINDBAKN_01704 1.1e-147 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
IINDBAKN_01705 1.3e-45 IQ reductase
IINDBAKN_01706 7.7e-11 IQ Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
IINDBAKN_01712 7.9e-117 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
IINDBAKN_01713 2.8e-266 lysP E amino acid
IINDBAKN_01715 1.3e-156 I alpha/beta hydrolase fold
IINDBAKN_01716 2.6e-115 lssY 3.6.1.27 I phosphatase
IINDBAKN_01717 2.8e-82 S Threonine/Serine exporter, ThrE
IINDBAKN_01718 3.2e-125 thrE S Putative threonine/serine exporter
IINDBAKN_01719 1.3e-30 cspA K Cold shock protein
IINDBAKN_01720 1.2e-123 sirR K iron dependent repressor
IINDBAKN_01721 2.7e-163 czcD P cation diffusion facilitator family transporter
IINDBAKN_01722 2.5e-116 S membrane
IINDBAKN_01723 2.4e-111 S VIT family
IINDBAKN_01724 4.5e-85 usp1 T Belongs to the universal stress protein A family
IINDBAKN_01725 8.1e-33 elaA S GNAT family
IINDBAKN_01726 8.2e-216 S CAAX protease self-immunity
IINDBAKN_01727 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
IINDBAKN_01728 2e-58
IINDBAKN_01729 1.9e-74 merR K MerR HTH family regulatory protein
IINDBAKN_01730 6.6e-268 lmrB EGP Major facilitator Superfamily
IINDBAKN_01731 6.8e-114 S Domain of unknown function (DUF4811)
IINDBAKN_01732 3.4e-285 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
IINDBAKN_01733 3.1e-248 araP U Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
IINDBAKN_01734 1.7e-204 araR K Transcriptional regulator
IINDBAKN_01735 1.4e-138 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
IINDBAKN_01736 2e-310 araB 2.7.1.12, 2.7.1.16, 2.7.1.17 G carbohydrate kinase FGGY
IINDBAKN_01737 1.1e-169 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
IINDBAKN_01739 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
IINDBAKN_01740 2.7e-108 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
IINDBAKN_01741 2.4e-189 I Alpha beta
IINDBAKN_01742 5.5e-121 ung2 3.2.2.27 L Uracil-DNA glycosylase
IINDBAKN_01743 3.2e-253 yjjP S Putative threonine/serine exporter
IINDBAKN_01744 4.5e-163 mleR K LysR family transcriptional regulator
IINDBAKN_01745 1.9e-224 yflS P Sodium:sulfate symporter transmembrane region
IINDBAKN_01746 1.3e-203 frdC 1.3.5.4 C FAD binding domain
IINDBAKN_01747 6.1e-223 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
IINDBAKN_01748 1.9e-91 XK27_09620 S NADPH-dependent FMN reductase
IINDBAKN_01749 2.1e-183 XK27_09615 S reductase
IINDBAKN_01750 3.6e-230 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
IINDBAKN_01751 5.3e-79 mleR K LysR family
IINDBAKN_01752 6.2e-59 L Helix-turn-helix domain
IINDBAKN_01753 5.5e-19 L hmm pf00665
IINDBAKN_01754 7.2e-121 L hmm pf00665
IINDBAKN_01755 3.6e-108 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
IINDBAKN_01756 0.0 scrA 2.7.1.211, 5.3.1.1 G phosphotransferase system
IINDBAKN_01757 2.5e-197 adhA 1.1.1.1 C Zinc-binding alcohol dehydrogenase family protein
IINDBAKN_01758 4.5e-301 scrB 3.2.1.26 GH32 G invertase
IINDBAKN_01759 3.9e-262 S Uncharacterized protein conserved in bacteria (DUF2252)
IINDBAKN_01760 3.2e-164 K LysR substrate binding domain
IINDBAKN_01761 6.8e-164 S Polyphosphate nucleotide phosphotransferase, PPK2 family
IINDBAKN_01762 5.5e-112
IINDBAKN_01763 1.4e-265 yjeM E Amino Acid
IINDBAKN_01764 3.7e-168 ponA V Beta-lactamase enzyme family
IINDBAKN_01765 3.4e-225 dacA 3.4.16.4 M Belongs to the peptidase S11 family
IINDBAKN_01766 2e-97
IINDBAKN_01767 1e-198 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
IINDBAKN_01768 2.3e-107 lssY 3.6.1.27 I Acid phosphatase homologues
IINDBAKN_01769 3.5e-54 S MazG-like family
IINDBAKN_01770 0.0 L Helicase C-terminal domain protein
IINDBAKN_01771 2.1e-70 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
IINDBAKN_01772 5e-96 K transcriptional regulator
IINDBAKN_01773 2.6e-253 lmrB EGP Major facilitator Superfamily
IINDBAKN_01774 2.1e-15 S Domain of unknown function (DUF4811)
IINDBAKN_01777 3.5e-38 S Cytochrome B5
IINDBAKN_01778 3e-89 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
IINDBAKN_01779 5.4e-214 2.1.1.14 E methionine synthase, vitamin-B12 independent
IINDBAKN_01780 1.1e-20 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S HAD-hyrolase-like
IINDBAKN_01781 5.1e-195 asnA 6.3.1.1 F aspartate--ammonia ligase
IINDBAKN_01782 7.1e-104 3.2.1.17 NU mannosyl-glycoprotein
IINDBAKN_01783 2.4e-95 wecD K Acetyltransferase (GNAT) family
IINDBAKN_01784 2.6e-288 dinB 2.7.7.7 L impB/mucB/samB family C-terminal domain
IINDBAKN_01785 5.9e-82 S Psort location Cytoplasmic, score
IINDBAKN_01786 3.8e-226 L transposase, IS605 OrfB family
IINDBAKN_01787 2.4e-43 L Transposase IS200 like
IINDBAKN_01788 4.3e-71 K helix_turn_helix, mercury resistance
IINDBAKN_01789 2.3e-133 ybgJ 3.5.1.54 E Allophanate hydrolase subunit 1
IINDBAKN_01790 2.9e-190 kipA 6.3.4.6 E Allophanate hydrolase subunit 2
IINDBAKN_01791 4.8e-54 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
IINDBAKN_01792 6.4e-257 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
IINDBAKN_01793 2.7e-124 ycsF S LamB/YcsF family
IINDBAKN_01794 6.3e-208 ycsG P Natural resistance-associated macrophage protein
IINDBAKN_01795 1.6e-208 EGP Major facilitator Superfamily
IINDBAKN_01796 4.9e-254 gor 1.8.1.7 C pyridine nucleotide-disulfide oxidoreductase
IINDBAKN_01797 1.1e-52 trxA O Belongs to the thioredoxin family
IINDBAKN_01798 7.5e-153 mleP3 S Membrane transport protein
IINDBAKN_01800 1.4e-225 L transposase, IS605 OrfB family
IINDBAKN_01801 4.4e-45 L Transposase IS200 like
IINDBAKN_01802 6.7e-243 gabT 2.6.1.19 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
IINDBAKN_01803 2.6e-240 yfnA E amino acid
IINDBAKN_01804 7.8e-61 S NADPH-dependent FMN reductase
IINDBAKN_01805 1.7e-10 S NADPH-dependent FMN reductase
IINDBAKN_01806 2.6e-157 L Thioesterase-like superfamily
IINDBAKN_01807 2.2e-20 lacA S transferase hexapeptide repeat
IINDBAKN_01808 4.7e-260 argH 4.3.2.1 E argininosuccinate lyase
IINDBAKN_01809 6.2e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
IINDBAKN_01810 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
IINDBAKN_01811 8.3e-102 K Transcriptional regulator
IINDBAKN_01812 1.7e-96 XK27_06785 V ABC transporter, ATP-binding protein
IINDBAKN_01813 2e-232 XK27_06780 V ABC transporter permease
IINDBAKN_01814 1.3e-09 fhaB 2.1.1.77, 2.7.7.7 M translation initiation factor activity
IINDBAKN_01815 3.8e-34 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
IINDBAKN_01816 2.7e-35 S FMN_bind
IINDBAKN_01817 0.0 yhcA V ABC transporter, ATP-binding protein
IINDBAKN_01818 1.8e-96 bm3R1 K Bacterial regulatory proteins, tetR family
IINDBAKN_01819 1.5e-126 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
IINDBAKN_01820 4.2e-236 L transposase, IS605 OrfB family
IINDBAKN_01821 1.6e-55 tlpA2 L Transposase IS200 like
IINDBAKN_01822 1.4e-50 ybjQ S Belongs to the UPF0145 family
IINDBAKN_01823 2.3e-74 rocF 3.5.3.1, 3.5.3.11 E Arginase family
IINDBAKN_01825 8.8e-173 1.3.1.9 S Nitronate monooxygenase
IINDBAKN_01826 4.7e-54 K Helix-turn-helix domain
IINDBAKN_01827 1.2e-105 S Domain of unknown function (DUF4767)
IINDBAKN_01828 1.3e-80
IINDBAKN_01829 0.0 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
IINDBAKN_01830 0.0 norZ 1.7.2.5 P Cytochrome C and Quinol oxidase polypeptide I
IINDBAKN_01831 5.7e-270 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
IINDBAKN_01832 2e-114 2.7.6.5 T Region found in RelA / SpoT proteins
IINDBAKN_01833 8e-80 K response regulator
IINDBAKN_01834 3.8e-131 sptS 2.7.13.3 T Histidine kinase
IINDBAKN_01835 5.3e-175 coaA 2.7.1.33 F Pantothenic acid kinase
IINDBAKN_01836 4.3e-103 2.3.1.128 K acetyltransferase
IINDBAKN_01837 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
IINDBAKN_01838 6.2e-160 EG EamA-like transporter family
IINDBAKN_01839 0.0 helD 3.6.4.12 L DNA helicase
IINDBAKN_01840 4.3e-118 dedA S SNARE associated Golgi protein
IINDBAKN_01841 4e-121 pgm7 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
IINDBAKN_01842 5e-232 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
IINDBAKN_01843 4e-209 menC 4.2.1.113 H Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)
IINDBAKN_01844 1.6e-134 pnuC H nicotinamide mononucleotide transporter
IINDBAKN_01845 1.5e-297 ybeC E amino acid
IINDBAKN_01846 2e-80 K FR47-like protein
IINDBAKN_01847 6.1e-48 V domain protein
IINDBAKN_01848 1.9e-147 V domain protein
IINDBAKN_01849 2.3e-93 K Transcriptional regulator (TetR family)
IINDBAKN_01850 3.6e-188 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
IINDBAKN_01851 6e-135
IINDBAKN_01853 4e-83 zur P Belongs to the Fur family
IINDBAKN_01854 1.7e-105 gmk2 2.7.4.8 F Guanylate kinase
IINDBAKN_01855 1.3e-72 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
IINDBAKN_01856 4.4e-205 yfnA E Amino Acid
IINDBAKN_01857 8.1e-235 L transposase, IS605 OrfB family
IINDBAKN_01858 2.9e-81 tlpA2 L Transposase IS200 like
IINDBAKN_01859 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
IINDBAKN_01860 3.1e-178 3.4.11.5 E Releases the N-terminal proline from various substrates
IINDBAKN_01861 2.3e-116 gph 3.1.3.18 S HAD hydrolase, family IA, variant
IINDBAKN_01862 1.7e-275 S Uncharacterized protein conserved in bacteria (DUF2325)
IINDBAKN_01863 1.2e-182 1.17.4.1 F Ribonucleotide reductase, small chain
IINDBAKN_01864 9.7e-169 nrdF 1.17.4.1 F Ribonucleotide reductase, small chain
IINDBAKN_01865 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
IINDBAKN_01866 1.4e-83 nrdI F NrdI Flavodoxin like
IINDBAKN_01867 5.1e-110 M ErfK YbiS YcfS YnhG
IINDBAKN_01869 5.2e-206 nrnB S DHHA1 domain
IINDBAKN_01870 3.4e-291 S ABC transporter, ATP-binding protein
IINDBAKN_01871 5.9e-180 ABC-SBP S ABC transporter
IINDBAKN_01872 1e-138 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
IINDBAKN_01873 1.6e-132 XK27_08845 S ABC transporter, ATP-binding protein
IINDBAKN_01875 3.3e-225 amtB P ammonium transporter
IINDBAKN_01876 7.3e-234 mepA V MATE efflux family protein
IINDBAKN_01877 3.2e-169 scrK 2.7.1.2, 2.7.1.4 GK ROK family
IINDBAKN_01878 4.8e-257 pgi 5.3.1.9 G Belongs to the GPI family
IINDBAKN_01879 8.8e-184 fruR3 K Transcriptional regulator, LacI family
IINDBAKN_01880 5e-162 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
IINDBAKN_01881 2.6e-166 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IINDBAKN_01882 1.2e-224 L transposase, IS605 OrfB family
IINDBAKN_01883 4.4e-45 L Transposase IS200 like
IINDBAKN_01884 1e-56 trxA1 O Belongs to the thioredoxin family
IINDBAKN_01885 2e-141 terC P membrane
IINDBAKN_01886 9.3e-169 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
IINDBAKN_01887 1.4e-170 corA P CorA-like Mg2+ transporter protein
IINDBAKN_01888 2.3e-147 pbuX F xanthine permease
IINDBAKN_01889 2.2e-61 pbuX F xanthine permease
IINDBAKN_01890 3.2e-150 qorB 1.6.5.2 GM NmrA-like family
IINDBAKN_01891 2.5e-126 pgm3 G phosphoglycerate mutase family
IINDBAKN_01892 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
IINDBAKN_01893 2e-85
IINDBAKN_01894 1.2e-109 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
IINDBAKN_01895 8.8e-101 dps P Belongs to the Dps family
IINDBAKN_01896 4.1e-31 copZ P Heavy-metal-associated domain
IINDBAKN_01897 0.0 cadA 3.6.3.3, 3.6.3.5 P P-type ATPase
IINDBAKN_01898 4.4e-183 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
IINDBAKN_01899 2e-180 iunH2 3.2.2.1 F nucleoside hydrolase
IINDBAKN_01900 5.9e-100 S ABC-type cobalt transport system, permease component
IINDBAKN_01901 3.2e-256 cbiO1 S ABC transporter, ATP-binding protein
IINDBAKN_01902 5.7e-115 P Cobalt transport protein
IINDBAKN_01903 2.6e-16 yvlA
IINDBAKN_01904 0.0 yjcE P Sodium proton antiporter
IINDBAKN_01905 5.4e-239 L transposase, IS605 OrfB family
IINDBAKN_01906 3.4e-82 tlpA2 L Transposase IS200 like
IINDBAKN_01907 3.8e-190 lplA2 6.3.1.20 H Bacterial lipoate protein ligase C-terminus
IINDBAKN_01908 1.6e-73 O OsmC-like protein
IINDBAKN_01909 1.8e-186 D Alpha beta
IINDBAKN_01910 8.4e-75 K Transcriptional regulator
IINDBAKN_01911 4.5e-160
IINDBAKN_01912 6.6e-20
IINDBAKN_01913 4.9e-16
IINDBAKN_01914 3.2e-33
IINDBAKN_01915 3.1e-75 uspA T universal stress protein
IINDBAKN_01917 9.7e-130 qmcA O prohibitin homologues
IINDBAKN_01918 9.5e-247 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
IINDBAKN_01919 2e-242 glpT G Major Facilitator Superfamily
IINDBAKN_01920 0.0 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
IINDBAKN_01921 6.7e-136 tal 2.2.1.2 H Transaldolase/Fructose-6-phosphate aldolase
IINDBAKN_01922 1.7e-125 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
IINDBAKN_01923 1.8e-40 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
IINDBAKN_01924 1.7e-70 tkt 2.2.1.1 H Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
IINDBAKN_01925 4e-181 L Transposase
IINDBAKN_01926 1.4e-170 hoxN U High-affinity nickel-transport protein
IINDBAKN_01927 1.7e-122 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
IINDBAKN_01928 6.2e-146 larE S NAD synthase
IINDBAKN_01929 7.3e-228 larC 4.99.1.12 S Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
IINDBAKN_01930 1.3e-131 cpmA S AIR carboxylase
IINDBAKN_01931 9.8e-236 larA 5.1.2.1 S Domain of unknown function (DUF2088)
IINDBAKN_01932 1.1e-121 K Crp-like helix-turn-helix domain
IINDBAKN_01933 2.6e-188 L Helix-turn-helix domain
IINDBAKN_01934 1.4e-72 L Transposase DDE domain group 1
IINDBAKN_01935 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
IINDBAKN_01936 6e-244 fucP G Major Facilitator Superfamily
IINDBAKN_01937 2.1e-67 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
IINDBAKN_01938 5.5e-164 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IINDBAKN_01939 1.4e-170 deoR K sugar-binding domain protein
IINDBAKN_01940 3.7e-114 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
IINDBAKN_01941 3.1e-200 S Domain of unknown function (DUF4432)
IINDBAKN_01942 7.2e-175 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
IINDBAKN_01943 1.3e-260 G PTS system Galactitol-specific IIC component
IINDBAKN_01944 1.7e-187 K helix_turn _helix lactose operon repressor
IINDBAKN_01945 2.4e-281 yjeM E Amino Acid
IINDBAKN_01947 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
IINDBAKN_01948 7.4e-149 ybjI 3.1.3.102, 3.1.3.104, 3.1.3.23 S haloacid dehalogenase-like hydrolase
IINDBAKN_01949 1e-128 gntR K UbiC transcription regulator-associated domain protein
IINDBAKN_01950 7.1e-89 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
IINDBAKN_01951 2.1e-129
IINDBAKN_01952 1.6e-266 pipD E Dipeptidase
IINDBAKN_01953 1.2e-157 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
IINDBAKN_01954 3.1e-87 M1-874 K Domain of unknown function (DUF1836)
IINDBAKN_01955 3e-90 GM epimerase
IINDBAKN_01956 3.3e-253 yhdP S Transporter associated domain
IINDBAKN_01957 2.4e-83 nrdI F Belongs to the NrdI family
IINDBAKN_01958 2.9e-75 S 3-demethylubiquinone-9 3-methyltransferase
IINDBAKN_01959 1.4e-207 yeaN P Transporter, major facilitator family protein
IINDBAKN_01960 2.6e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
IINDBAKN_01961 9.2e-275 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
IINDBAKN_01962 1e-81 uspA T universal stress protein
IINDBAKN_01963 3e-78 K AsnC family
IINDBAKN_01964 8.4e-142 IQ Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
IINDBAKN_01965 1.1e-178 K helix_turn _helix lactose operon repressor
IINDBAKN_01966 0.0 pepF E oligoendopeptidase F
IINDBAKN_01967 4.2e-234 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
IINDBAKN_01968 2.6e-123 S Membrane
IINDBAKN_01969 5.3e-144 L 4.5 Transposon and IS
IINDBAKN_01970 0.0 dld 1.1.5.12 C D-lactate dehydrogenase, membrane binding
IINDBAKN_01971 2.2e-22 L hmm pf00665
IINDBAKN_01972 9.2e-121 ribA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
IINDBAKN_01974 1.2e-227 tnp L MULE transposase domain
IINDBAKN_01975 1.6e-224 L Transposase
IINDBAKN_01976 4.1e-99 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
IINDBAKN_01977 3.8e-114 devA 3.6.3.25 V ABC transporter, ATP-binding protein
IINDBAKN_01978 1.7e-161 hrtB V ABC transporter permease
IINDBAKN_01979 1.4e-72 crtB 2.5.1.32, 2.5.1.99 I Squalene/phytoene synthase
IINDBAKN_01980 1.8e-58 L Helix-turn-helix domain
IINDBAKN_01981 4.7e-44 L hmm pf00665
IINDBAKN_01982 6e-277 lacS G Transporter
IINDBAKN_01983 0.0 rafA 3.2.1.22 G alpha-galactosidase
IINDBAKN_01984 1.6e-180 galR K Transcriptional regulator
IINDBAKN_01985 2.2e-284 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
IINDBAKN_01986 7.9e-224 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
IINDBAKN_01987 2.7e-182 celE 3.2.1.4 GH5,GH9 E GDSL-like Lipase/Acylhydrolase family
IINDBAKN_01988 2.3e-142 ptp3 3.1.3.48 T Tyrosine phosphatase family
IINDBAKN_01989 8e-96 yxkA S Phosphatidylethanolamine-binding protein
IINDBAKN_01990 6.9e-36
IINDBAKN_01991 6.6e-136 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
IINDBAKN_01992 5.3e-119 tcyB U Binding-protein-dependent transport system inner membrane component
IINDBAKN_01993 5.7e-141 tcyA ET Belongs to the bacterial solute-binding protein 3 family
IINDBAKN_01994 2e-52
IINDBAKN_01995 1.4e-170 MA20_03535 1.1.1.399, 1.1.1.95 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
IINDBAKN_01996 6.4e-79 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
IINDBAKN_01997 6.9e-147 pnuC H nicotinamide mononucleotide transporter
IINDBAKN_01998 4.1e-92 ymdB S Macro domain protein
IINDBAKN_01999 0.0 pepO 3.4.24.71 O Peptidase family M13
IINDBAKN_02000 1.8e-229 pbuG S permease
IINDBAKN_02001 2.5e-46
IINDBAKN_02002 2.6e-214 S Putative metallopeptidase domain
IINDBAKN_02003 1.9e-206 3.1.3.1 S associated with various cellular activities
IINDBAKN_02004 1.3e-116 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
IINDBAKN_02005 6.8e-65 yeaO S Protein of unknown function, DUF488
IINDBAKN_02007 1.4e-124 yrkL S Flavodoxin-like fold
IINDBAKN_02008 1.5e-55
IINDBAKN_02009 5.5e-107 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
IINDBAKN_02010 1e-96 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
IINDBAKN_02011 3.2e-102
IINDBAKN_02012 9.5e-26
IINDBAKN_02013 7.5e-107 scrR K Transcriptional regulator, LacI family
IINDBAKN_02014 1e-173 acm2 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
IINDBAKN_02015 2.6e-46 czrA K Transcriptional regulator, ArsR family
IINDBAKN_02016 1.8e-75 argR K Regulates arginine biosynthesis genes
IINDBAKN_02017 5.5e-124 devA 3.6.3.25 V ABC transporter, ATP-binding protein
IINDBAKN_02018 9.6e-154 hrtB V ABC transporter permease
IINDBAKN_02019 1.5e-106 ygfC K Bacterial regulatory proteins, tetR family
IINDBAKN_02020 2.4e-189 tdh 1.1.1.14 E Alcohol dehydrogenase GroES-like domain
IINDBAKN_02021 4.2e-281 mntH P H( )-stimulated, divalent metal cation uptake system
IINDBAKN_02022 2.2e-22
IINDBAKN_02023 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
IINDBAKN_02024 4.1e-70 L nuclease
IINDBAKN_02025 7.7e-163 F DNA/RNA non-specific endonuclease
IINDBAKN_02026 2.4e-127 L transposase, IS605 OrfB family
IINDBAKN_02027 3.1e-86 L transposase, IS605 OrfB family
IINDBAKN_02028 1.7e-81 tlpA2 L Transposase IS200 like
IINDBAKN_02029 6.6e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
IINDBAKN_02030 1.1e-292 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
IINDBAKN_02031 3e-292 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
IINDBAKN_02032 0.0 asnB 6.3.5.4 E Asparagine synthase
IINDBAKN_02033 6.6e-220 lysP E amino acid
IINDBAKN_02034 2.1e-48 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
IINDBAKN_02035 2.9e-81 tlpA2 L Transposase IS200 like
IINDBAKN_02036 4.3e-236 L transposase, IS605 OrfB family
IINDBAKN_02037 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
IINDBAKN_02038 1.1e-253 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
IINDBAKN_02039 1.1e-153 jag S R3H domain protein
IINDBAKN_02040 3.4e-144 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
IINDBAKN_02041 1.4e-56 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
IINDBAKN_02042 2.6e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
IINDBAKN_02043 2.2e-135 glcU G Sugar transport protein
IINDBAKN_02044 3e-184 L PFAM Integrase, catalytic core
IINDBAKN_02045 7.8e-63 tcmJ G COG0662 Mannose-6-phosphate isomerase
IINDBAKN_02046 9e-31 L Transposase and inactivated derivatives
IINDBAKN_02047 6.6e-53 tnp2PF3 L Putative transposase of IS4/5 family (DUF4096)
IINDBAKN_02048 1.9e-27 S Protein of unknown function, DUF536
IINDBAKN_02049 1.4e-178 tnp L MULE transposase domain
IINDBAKN_02050 1.8e-41
IINDBAKN_02051 3.9e-151 D CobQ CobB MinD ParA nucleotide binding domain protein
IINDBAKN_02052 9.7e-29 L integrase family
IINDBAKN_02053 2.7e-51 L hmm pf00665
IINDBAKN_02054 8.2e-52 L Resolvase, N terminal domain
IINDBAKN_02055 7.3e-71 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
IINDBAKN_02056 2.4e-256 ykgC 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
IINDBAKN_02057 1.2e-149 traA L MobA/MobL family
IINDBAKN_02058 4.2e-209 traA L MobA/MobL family
IINDBAKN_02060 5.1e-156 repA S Replication initiator protein A
IINDBAKN_02061 1.1e-245 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)