ORF_ID e_value Gene_name EC_number CAZy COGs Description
INCMDMJA_00003 3.4e-17 CO COG0526, thiol-disulfide isomerase and thioredoxins
INCMDMJA_00006 1.2e-32 M Peptidase family M23
INCMDMJA_00007 1.8e-159 trsE S COG0433 Predicted ATPase
INCMDMJA_00008 8.4e-15
INCMDMJA_00010 3.9e-32 I mechanosensitive ion channel activity
INCMDMJA_00011 2.3e-86 U TraM recognition site of TraD and TraG
INCMDMJA_00012 3.2e-19
INCMDMJA_00014 3.2e-182 M Glycosyl hydrolases family 25
INCMDMJA_00015 8e-27
INCMDMJA_00016 7e-16
INCMDMJA_00018 1.7e-16
INCMDMJA_00020 1.2e-10
INCMDMJA_00025 6.4e-70
INCMDMJA_00026 3.4e-35
INCMDMJA_00027 1.4e-09
INCMDMJA_00028 7.4e-113 Z012_12235 S Baseplate J-like protein
INCMDMJA_00029 7.4e-29
INCMDMJA_00030 3.9e-36
INCMDMJA_00031 1.9e-102
INCMDMJA_00032 2.7e-46
INCMDMJA_00033 3.8e-59 M LysM domain
INCMDMJA_00034 1e-220 3.4.14.13 M Phage tail tape measure protein TP901
INCMDMJA_00036 2.9e-09
INCMDMJA_00037 9.3e-29
INCMDMJA_00038 3.5e-103 Z012_02110 S Protein of unknown function (DUF3383)
INCMDMJA_00039 3.3e-31
INCMDMJA_00040 1.6e-25
INCMDMJA_00041 1.1e-28
INCMDMJA_00042 1.6e-19 S Protein of unknown function (DUF4054)
INCMDMJA_00043 2.4e-93 Z012_11565 S Uncharacterized protein conserved in bacteria (DUF2184)
INCMDMJA_00044 4.1e-34
INCMDMJA_00045 1.6e-57 S Uncharacterized protein conserved in bacteria (DUF2213)
INCMDMJA_00046 5e-12 S Lysin motif
INCMDMJA_00047 1.3e-47 S Phage Mu protein F like protein
INCMDMJA_00048 6.2e-135 S Protein of unknown function (DUF1073)
INCMDMJA_00049 1.1e-201 S Terminase-like family
INCMDMJA_00050 3e-19 ps333 L Terminase small subunit
INCMDMJA_00053 3.3e-09 arpU S Phage transcriptional regulator, ArpU family
INCMDMJA_00056 3.8e-219 XK27_11280 S Psort location CytoplasmicMembrane, score
INCMDMJA_00064 1.2e-100 L Helix-turn-helix domain
INCMDMJA_00065 5.3e-131 S ERF superfamily
INCMDMJA_00066 3.9e-127 S Protein of unknown function (DUF1351)
INCMDMJA_00067 4.6e-45
INCMDMJA_00069 5.5e-18
INCMDMJA_00070 1.8e-31 S Helix-turn-helix domain
INCMDMJA_00076 4.9e-94 S DNA binding
INCMDMJA_00077 1.4e-17 K Helix-turn-helix XRE-family like proteins
INCMDMJA_00078 8.8e-22 K Helix-turn-helix XRE-family like proteins
INCMDMJA_00079 2.4e-07 S Pfam:DUF955
INCMDMJA_00080 5.6e-08 M Host cell surface-exposed lipoprotein
INCMDMJA_00081 6.2e-12
INCMDMJA_00082 3.7e-93 sip L Belongs to the 'phage' integrase family
INCMDMJA_00083 5.7e-48 U TraM recognition site of TraD and TraG
INCMDMJA_00085 2.9e-69 S Iron-sulphur cluster biosynthesis
INCMDMJA_00087 2.3e-30
INCMDMJA_00088 2.6e-171 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
INCMDMJA_00089 6.2e-12
INCMDMJA_00090 1.5e-16 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
INCMDMJA_00091 4.1e-78 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
INCMDMJA_00092 2.8e-86 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
INCMDMJA_00093 5.8e-78 M LysM domain protein
INCMDMJA_00094 4.7e-159 D nuclear chromosome segregation
INCMDMJA_00095 1.2e-105 G Phosphoglycerate mutase family
INCMDMJA_00096 2.6e-89 G Histidine phosphatase superfamily (branch 1)
INCMDMJA_00097 6.6e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
INCMDMJA_00098 1.2e-115 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
INCMDMJA_00100 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
INCMDMJA_00102 6.5e-210 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
INCMDMJA_00103 2.7e-185 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
INCMDMJA_00104 8.1e-120 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
INCMDMJA_00105 4.4e-144 K SIS domain
INCMDMJA_00106 4.8e-44 slpX S SLAP domain
INCMDMJA_00107 5.3e-167 slpX S SLAP domain
INCMDMJA_00108 1.3e-22 3.6.4.12 S transposase or invertase
INCMDMJA_00109 6.6e-11
INCMDMJA_00110 9.2e-240 npr 1.11.1.1 C NADH oxidase
INCMDMJA_00113 4.4e-239 oppA2 E ABC transporter, substratebinding protein
INCMDMJA_00114 3.4e-45 oppA2 E ABC transporter, substratebinding protein
INCMDMJA_00115 3.3e-179
INCMDMJA_00116 4.6e-123 gntR1 K UTRA
INCMDMJA_00117 5.1e-71 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
INCMDMJA_00118 2.1e-134 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
INCMDMJA_00119 1.7e-204 csaB M Glycosyl transferases group 1
INCMDMJA_00120 2.4e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
INCMDMJA_00121 1.2e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
INCMDMJA_00122 1.4e-204 tnpB L Putative transposase DNA-binding domain
INCMDMJA_00123 0.0 pacL 3.6.3.8 P P-type ATPase
INCMDMJA_00124 7e-225 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
INCMDMJA_00125 6e-258 epsU S Polysaccharide biosynthesis protein
INCMDMJA_00126 7.7e-134 M Glycosyltransferase sugar-binding region containing DXD motif
INCMDMJA_00127 4.1e-83 ydcK S Belongs to the SprT family
INCMDMJA_00129 5.2e-84 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
INCMDMJA_00130 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
INCMDMJA_00131 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
INCMDMJA_00132 5.8e-203 camS S sex pheromone
INCMDMJA_00133 1.5e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
INCMDMJA_00134 2.9e-268 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
INCMDMJA_00135 2.7e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
INCMDMJA_00136 2.7e-171 yegS 2.7.1.107 G Lipid kinase
INCMDMJA_00137 4.3e-108 ybhL S Belongs to the BI1 family
INCMDMJA_00138 2.6e-57
INCMDMJA_00139 1.4e-147 I transferase activity, transferring acyl groups other than amino-acyl groups
INCMDMJA_00140 2.8e-244 nhaC C Na H antiporter NhaC
INCMDMJA_00141 6.3e-201 pbpX V Beta-lactamase
INCMDMJA_00142 4.9e-254 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
INCMDMJA_00143 1.1e-94 MA20_25245 K Acetyltransferase (GNAT) domain
INCMDMJA_00148 1.9e-259 emrY EGP Major facilitator Superfamily
INCMDMJA_00149 2e-91 yxdD K Bacterial regulatory proteins, tetR family
INCMDMJA_00150 0.0 4.2.1.53 S Myosin-crossreactive antigen
INCMDMJA_00151 6.5e-57 S Protein of unknown function (DUF1071)
INCMDMJA_00156 1.8e-07 K Helix-turn-helix XRE-family like proteins
INCMDMJA_00157 7.2e-10
INCMDMJA_00161 4.3e-98 S AntA/AntB antirepressor
INCMDMJA_00162 2.9e-12
INCMDMJA_00167 1.3e-81 S DNA binding
INCMDMJA_00168 9.5e-12 K Helix-turn-helix XRE-family like proteins
INCMDMJA_00169 6.5e-23 K Cro/C1-type HTH DNA-binding domain
INCMDMJA_00170 3.3e-18 S Pfam:Peptidase_M78
INCMDMJA_00175 1.6e-20 S YjcQ protein
INCMDMJA_00176 4.2e-180 sip L Belongs to the 'phage' integrase family
INCMDMJA_00177 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
INCMDMJA_00178 2.2e-202 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
INCMDMJA_00179 0.0 dnaK O Heat shock 70 kDa protein
INCMDMJA_00180 8e-68 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
INCMDMJA_00181 4.9e-193 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
INCMDMJA_00182 3.2e-175 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
INCMDMJA_00183 1.6e-155 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
INCMDMJA_00184 1.1e-59 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
INCMDMJA_00185 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
INCMDMJA_00186 3.2e-47 rplGA J ribosomal protein
INCMDMJA_00187 8.8e-47 ylxR K Protein of unknown function (DUF448)
INCMDMJA_00188 1.4e-196 nusA K Participates in both transcription termination and antitermination
INCMDMJA_00189 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
INCMDMJA_00190 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
INCMDMJA_00191 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
INCMDMJA_00192 5.7e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
INCMDMJA_00193 8.4e-140 cdsA 2.7.7.41 I Belongs to the CDS family
INCMDMJA_00194 5.4e-138 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
INCMDMJA_00195 5.3e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
INCMDMJA_00196 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
INCMDMJA_00197 3.1e-184 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
INCMDMJA_00198 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
INCMDMJA_00199 3e-195 yabB 2.1.1.223 L Methyltransferase small domain
INCMDMJA_00200 2.9e-116 plsC 2.3.1.51 I Acyltransferase
INCMDMJA_00201 3.9e-223 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
INCMDMJA_00202 0.0 pepO 3.4.24.71 O Peptidase family M13
INCMDMJA_00203 0.0 mdlB V ABC transporter
INCMDMJA_00204 0.0 mdlA V ABC transporter
INCMDMJA_00205 5.5e-30 yneF S Uncharacterised protein family (UPF0154)
INCMDMJA_00206 3e-38 ynzC S UPF0291 protein
INCMDMJA_00207 2e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
INCMDMJA_00208 9.8e-146 E GDSL-like Lipase/Acylhydrolase family
INCMDMJA_00209 5.4e-121 ung2 3.2.2.27 L Uracil-DNA glycosylase
INCMDMJA_00210 4.6e-213 S SLAP domain
INCMDMJA_00215 3.3e-37 S VRR_NUC
INCMDMJA_00217 3.4e-18
INCMDMJA_00218 5.2e-31 S HNH endonuclease
INCMDMJA_00219 1.6e-55 L Phage terminase, small subunit
INCMDMJA_00220 3.4e-18 N HicA toxin of bacterial toxin-antitoxin,
INCMDMJA_00221 9e-47 S HicB_like antitoxin of bacterial toxin-antitoxin system
INCMDMJA_00222 1.8e-209 S Phage Terminase
INCMDMJA_00224 4.1e-135 S Phage portal protein
INCMDMJA_00225 5.5e-87 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
INCMDMJA_00226 9.1e-56 S Phage capsid family
INCMDMJA_00227 5.2e-17 S Phage gp6-like head-tail connector protein
INCMDMJA_00229 2.3e-14 S Bacteriophage HK97-gp10, putative tail-component
INCMDMJA_00231 1.2e-12 S Pfam:Phage_TTP_1
INCMDMJA_00234 3.4e-127 M Phage tail tape measure protein TP901
INCMDMJA_00235 4.5e-34 S phage tail
INCMDMJA_00236 6e-136 S Phage minor structural protein
INCMDMJA_00245 3.4e-37 S Bacteriophage holin of superfamily 6 (Holin_LLH)
INCMDMJA_00246 1.1e-100 M hydrolase, family 25
INCMDMJA_00248 1.5e-09
INCMDMJA_00249 2.8e-309 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
INCMDMJA_00250 2.3e-23 S Protein of unknown function (DUF2929)
INCMDMJA_00251 0.0 dnaE 2.7.7.7 L DNA polymerase
INCMDMJA_00252 3.3e-183 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
INCMDMJA_00253 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
INCMDMJA_00254 1e-167 cvfB S S1 domain
INCMDMJA_00255 2.9e-165 xerD D recombinase XerD
INCMDMJA_00256 2.6e-61 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
INCMDMJA_00257 7.6e-132 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
INCMDMJA_00258 4.1e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
INCMDMJA_00259 3.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
INCMDMJA_00260 2.2e-112 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
INCMDMJA_00261 2.7e-18 M Lysin motif
INCMDMJA_00262 2.2e-114 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
INCMDMJA_00263 5.5e-212 rpsA 1.17.7.4 J Ribosomal protein S1
INCMDMJA_00264 2.2e-246 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
INCMDMJA_00265 2.3e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
INCMDMJA_00266 3.9e-229 S Tetratricopeptide repeat protein
INCMDMJA_00267 1.3e-237 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
INCMDMJA_00268 5.6e-132 oppC P Binding-protein-dependent transport system inner membrane component
INCMDMJA_00269 2.6e-172 oppB P ABC transporter permease
INCMDMJA_00270 1.5e-170 oppF P Belongs to the ABC transporter superfamily
INCMDMJA_00271 1.1e-192 oppD P Belongs to the ABC transporter superfamily
INCMDMJA_00272 4.9e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
INCMDMJA_00273 3.7e-182 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
INCMDMJA_00274 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
INCMDMJA_00275 7.6e-305 yloV S DAK2 domain fusion protein YloV
INCMDMJA_00276 4e-57 asp S Asp23 family, cell envelope-related function
INCMDMJA_00277 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
INCMDMJA_00278 1.4e-30
INCMDMJA_00279 4.1e-124 thiN 2.7.6.2 H thiamine pyrophosphokinase
INCMDMJA_00280 2.9e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
INCMDMJA_00281 4.5e-163 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
INCMDMJA_00282 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
INCMDMJA_00283 1.1e-138 stp 3.1.3.16 T phosphatase
INCMDMJA_00284 1.6e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
INCMDMJA_00285 5.7e-172 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
INCMDMJA_00286 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
INCMDMJA_00287 1.1e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
INCMDMJA_00288 2.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
INCMDMJA_00289 1.1e-77 6.3.3.2 S ASCH
INCMDMJA_00290 2.6e-300 recN L May be involved in recombinational repair of damaged DNA
INCMDMJA_00291 2.3e-153 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
INCMDMJA_00292 1e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
INCMDMJA_00293 3.7e-35 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
INCMDMJA_00294 2.9e-193 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
INCMDMJA_00295 6.7e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
INCMDMJA_00296 1.1e-63 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
INCMDMJA_00297 3.4e-71 yqhY S Asp23 family, cell envelope-related function
INCMDMJA_00298 4.9e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
INCMDMJA_00299 1e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
INCMDMJA_00300 1.3e-47 rpmA J Belongs to the bacterial ribosomal protein bL27 family
INCMDMJA_00301 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
INCMDMJA_00302 3.7e-151 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
INCMDMJA_00303 7.8e-255 S Uncharacterized protein conserved in bacteria (DUF2325)
INCMDMJA_00305 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
INCMDMJA_00306 4.3e-298 S Predicted membrane protein (DUF2207)
INCMDMJA_00307 1.2e-155 cinI S Serine hydrolase (FSH1)
INCMDMJA_00308 1e-205 M Glycosyl hydrolases family 25
INCMDMJA_00310 8.5e-178 I Carboxylesterase family
INCMDMJA_00311 1.5e-64 arsC 1.20.4.1 P Belongs to the ArsC family
INCMDMJA_00312 2.9e-277 V ABC-type multidrug transport system, ATPase and permease components
INCMDMJA_00313 4.5e-291 V ABC-type multidrug transport system, ATPase and permease components
INCMDMJA_00314 1.7e-148 S haloacid dehalogenase-like hydrolase
INCMDMJA_00315 7e-50
INCMDMJA_00316 1.9e-37
INCMDMJA_00317 1.2e-63 S Alpha beta hydrolase
INCMDMJA_00318 1e-23 S Alpha beta hydrolase
INCMDMJA_00319 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
INCMDMJA_00320 2.8e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
INCMDMJA_00321 7.1e-46
INCMDMJA_00322 2.4e-92 V ABC transporter, ATP-binding protein
INCMDMJA_00323 4.7e-60 S ABC-2 family transporter protein
INCMDMJA_00324 2.1e-76 S ABC-2 family transporter protein
INCMDMJA_00325 8.2e-230 pbuG S permease
INCMDMJA_00326 8.2e-140 cof S haloacid dehalogenase-like hydrolase
INCMDMJA_00327 9.4e-72
INCMDMJA_00328 9.3e-124 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
INCMDMJA_00329 8.5e-119 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
INCMDMJA_00330 2.1e-134 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
INCMDMJA_00331 3.7e-159 yeaE S Aldo/keto reductase family
INCMDMJA_00332 2.2e-171 yufQ S Belongs to the binding-protein-dependent transport system permease family
INCMDMJA_00333 1.9e-198 yufP S Belongs to the binding-protein-dependent transport system permease family
INCMDMJA_00334 1.3e-282 xylG 3.6.3.17 S ABC transporter
INCMDMJA_00335 6.9e-181 tcsA S ABC transporter substrate-binding protein PnrA-like
INCMDMJA_00336 3.9e-201 tcsA S ABC transporter substrate-binding protein PnrA-like
INCMDMJA_00337 2.8e-100 S ECF transporter, substrate-specific component
INCMDMJA_00338 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
INCMDMJA_00339 0.0 macB_3 V ABC transporter, ATP-binding protein
INCMDMJA_00340 1.6e-194 S DUF218 domain
INCMDMJA_00341 2.7e-120 S CAAX protease self-immunity
INCMDMJA_00342 3e-111 ropB K Transcriptional regulator
INCMDMJA_00343 4.2e-154 EGP Major facilitator Superfamily
INCMDMJA_00344 5.4e-51
INCMDMJA_00345 2.6e-155 mutR K Helix-turn-helix XRE-family like proteins
INCMDMJA_00346 4.1e-276 V ABC transporter transmembrane region
INCMDMJA_00347 2.3e-41 S YoeB-like toxin of bacterial type II toxin-antitoxin system
INCMDMJA_00348 1.9e-47 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
INCMDMJA_00349 2.8e-205 napA P Sodium/hydrogen exchanger family
INCMDMJA_00350 0.0 cadA P P-type ATPase
INCMDMJA_00351 1.5e-80 ykuL S (CBS) domain
INCMDMJA_00352 1e-207 ywhK S Membrane
INCMDMJA_00353 4.1e-44
INCMDMJA_00354 1.2e-18 S D-Ala-teichoic acid biosynthesis protein
INCMDMJA_00355 2.1e-285 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
INCMDMJA_00356 7.3e-236 dltB M MBOAT, membrane-bound O-acyltransferase family
INCMDMJA_00357 1.7e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
INCMDMJA_00358 7.3e-247 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
INCMDMJA_00359 7.6e-177 pbpX2 V Beta-lactamase
INCMDMJA_00360 2.3e-133 S Protein of unknown function (DUF975)
INCMDMJA_00361 2.7e-137 lysA2 M Glycosyl hydrolases family 25
INCMDMJA_00362 7.9e-291 ytgP S Polysaccharide biosynthesis protein
INCMDMJA_00363 1.9e-36
INCMDMJA_00364 0.0 XK27_06780 V ABC transporter permease
INCMDMJA_00365 5.1e-125 XK27_06785 V ABC transporter, ATP-binding protein
INCMDMJA_00367 9.3e-51 dnaC L IstB-like ATP binding protein
INCMDMJA_00373 1.2e-40 rusA 3.1.22.4 L Endodeoxyribonuclease RusA
INCMDMJA_00374 2.1e-14
INCMDMJA_00382 2.7e-35 S HicB_like antitoxin of bacterial toxin-antitoxin system
INCMDMJA_00383 5.2e-10 hicA N HicA toxin of bacterial toxin-antitoxin,
INCMDMJA_00384 1.5e-28 L Terminase small subunit
INCMDMJA_00385 1.8e-230 S Terminase-like family
INCMDMJA_00386 7e-142 S Protein of unknown function (DUF1073)
INCMDMJA_00387 1e-97 S Phage Mu protein F like protein
INCMDMJA_00388 1.1e-07 S Lysin motif
INCMDMJA_00389 3.9e-87 S Uncharacterized protein conserved in bacteria (DUF2213)
INCMDMJA_00390 1.6e-58
INCMDMJA_00391 3.5e-142 Z012_11565 S Uncharacterized protein conserved in bacteria (DUF2184)
INCMDMJA_00392 2.1e-30 S Protein of unknown function (DUF4054)
INCMDMJA_00393 1.5e-75
INCMDMJA_00394 2.9e-45
INCMDMJA_00395 8e-57
INCMDMJA_00396 9.7e-153 Z012_02110 S Protein of unknown function (DUF3383)
INCMDMJA_00397 4e-56
INCMDMJA_00398 9e-27
INCMDMJA_00400 0.0 3.4.14.13 M Phage tail tape measure protein TP901
INCMDMJA_00401 1.2e-58 M LysM domain
INCMDMJA_00402 2.1e-46
INCMDMJA_00403 5.7e-104
INCMDMJA_00404 1.2e-48
INCMDMJA_00405 9.5e-33
INCMDMJA_00406 1.7e-125 Z012_12235 S Baseplate J-like protein
INCMDMJA_00407 1.1e-08
INCMDMJA_00408 1.6e-36
INCMDMJA_00414 7.1e-38
INCMDMJA_00415 2.2e-19 S Phage uncharacterised protein (Phage_XkdX)
INCMDMJA_00416 1.1e-07
INCMDMJA_00418 7.9e-19
INCMDMJA_00419 5e-29
INCMDMJA_00420 2.1e-173 M Glycosyl hydrolases family 25
INCMDMJA_00421 5.9e-24
INCMDMJA_00422 2.5e-35 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
INCMDMJA_00423 1.5e-102 srtA 3.4.22.70 M sortase family
INCMDMJA_00424 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
INCMDMJA_00425 1.2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
INCMDMJA_00426 2.7e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
INCMDMJA_00427 1.3e-114 dnaD L DnaD domain protein
INCMDMJA_00428 5.8e-260 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
INCMDMJA_00429 2.4e-89 ypmB S Protein conserved in bacteria
INCMDMJA_00430 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
INCMDMJA_00431 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
INCMDMJA_00432 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
INCMDMJA_00433 4.8e-136 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
INCMDMJA_00434 1.4e-178 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
INCMDMJA_00435 2.1e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
INCMDMJA_00436 6.9e-184 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
INCMDMJA_00437 1.3e-116 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
INCMDMJA_00438 8.3e-265 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
INCMDMJA_00439 9.7e-169
INCMDMJA_00440 7.5e-143
INCMDMJA_00441 3.9e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
INCMDMJA_00442 1.4e-26
INCMDMJA_00443 6.7e-145
INCMDMJA_00444 5.1e-137
INCMDMJA_00445 4.5e-141
INCMDMJA_00446 9.6e-124 skfE V ATPases associated with a variety of cellular activities
INCMDMJA_00447 1.4e-60 yvoA_1 K Transcriptional regulator, GntR family
INCMDMJA_00448 1.7e-240 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
INCMDMJA_00449 1.4e-152 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
INCMDMJA_00450 3.5e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
INCMDMJA_00451 4.8e-81 mutT 3.6.1.55 F NUDIX domain
INCMDMJA_00452 1.4e-127 S Peptidase family M23
INCMDMJA_00453 9.9e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
INCMDMJA_00454 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
INCMDMJA_00455 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
INCMDMJA_00456 4.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
INCMDMJA_00457 4.4e-135 recO L Involved in DNA repair and RecF pathway recombination
INCMDMJA_00458 2.1e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
INCMDMJA_00459 2.2e-93 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
INCMDMJA_00460 1.1e-175 phoH T phosphate starvation-inducible protein PhoH
INCMDMJA_00461 3.5e-71 yqeY S YqeY-like protein
INCMDMJA_00462 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
INCMDMJA_00463 1.2e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
INCMDMJA_00464 8.4e-262 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
INCMDMJA_00465 1.7e-113 tdk 2.7.1.21 F thymidine kinase
INCMDMJA_00466 3.1e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
INCMDMJA_00467 7.3e-155 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
INCMDMJA_00468 1.9e-189 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
INCMDMJA_00469 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
INCMDMJA_00470 1e-128 atpB C it plays a direct role in the translocation of protons across the membrane
INCMDMJA_00471 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
INCMDMJA_00472 4.4e-46 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
INCMDMJA_00473 1.3e-91 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
INCMDMJA_00474 2.5e-283 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
INCMDMJA_00475 8.9e-173 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
INCMDMJA_00476 3.3e-240 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
INCMDMJA_00477 9e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
INCMDMJA_00478 2e-30 ywzB S Protein of unknown function (DUF1146)
INCMDMJA_00479 1.2e-177 mbl D Cell shape determining protein MreB Mrl
INCMDMJA_00480 1e-50 yidD S Could be involved in insertion of integral membrane proteins into the membrane
INCMDMJA_00481 3.3e-33 S Protein of unknown function (DUF2969)
INCMDMJA_00482 4.7e-216 rodA D Belongs to the SEDS family
INCMDMJA_00483 1.8e-78 usp6 T universal stress protein
INCMDMJA_00484 8.4e-39
INCMDMJA_00485 6.3e-238 rarA L recombination factor protein RarA
INCMDMJA_00486 1.3e-84 yueI S Protein of unknown function (DUF1694)
INCMDMJA_00487 1.4e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
INCMDMJA_00488 4e-293 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
INCMDMJA_00489 6.2e-213 iscS2 2.8.1.7 E Aminotransferase class V
INCMDMJA_00490 2e-225 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
INCMDMJA_00491 1.7e-184 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
INCMDMJA_00492 3.2e-119 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
INCMDMJA_00493 5.5e-44 3.6.4.12 S PD-(D/E)XK nuclease family transposase
INCMDMJA_00494 2.1e-65 2.4.1.83 GT2 S GtrA-like protein
INCMDMJA_00495 5.2e-170 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
INCMDMJA_00496 1.5e-94 S Protein of unknown function (DUF3990)
INCMDMJA_00497 6.5e-44
INCMDMJA_00499 0.0 3.6.3.8 P P-type ATPase
INCMDMJA_00500 1.1e-132 S AAA domain, putative AbiEii toxin, Type IV TA system
INCMDMJA_00501 2.5e-52
INCMDMJA_00502 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
INCMDMJA_00503 1.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
INCMDMJA_00504 5.7e-126 S Haloacid dehalogenase-like hydrolase
INCMDMJA_00505 2.3e-108 radC L DNA repair protein
INCMDMJA_00506 2.4e-176 mreB D cell shape determining protein MreB
INCMDMJA_00507 2e-147 mreC M Involved in formation and maintenance of cell shape
INCMDMJA_00508 2.7e-94 mreD
INCMDMJA_00509 2.5e-130 ybbM S Uncharacterised protein family (UPF0014)
INCMDMJA_00510 4.9e-111 ybbL S ABC transporter, ATP-binding protein
INCMDMJA_00511 0.0 S SH3-like domain
INCMDMJA_00512 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
INCMDMJA_00513 2.1e-171 whiA K May be required for sporulation
INCMDMJA_00514 4e-195 ybhK S Required for morphogenesis under gluconeogenic growth conditions
INCMDMJA_00515 6.2e-165 rapZ S Displays ATPase and GTPase activities
INCMDMJA_00516 4.1e-90 S Short repeat of unknown function (DUF308)
INCMDMJA_00517 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
INCMDMJA_00518 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
INCMDMJA_00519 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
INCMDMJA_00520 3.9e-181 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
INCMDMJA_00521 1.1e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
INCMDMJA_00522 9.2e-158 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
INCMDMJA_00523 5.8e-180 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
INCMDMJA_00524 5.1e-17
INCMDMJA_00525 1e-187 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
INCMDMJA_00526 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
INCMDMJA_00527 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
INCMDMJA_00528 9.4e-132 comFC S Competence protein
INCMDMJA_00529 4.7e-246 comFA L Helicase C-terminal domain protein
INCMDMJA_00530 5.1e-119 yvyE 3.4.13.9 S YigZ family
INCMDMJA_00531 1.3e-210 tagO 2.7.8.33, 2.7.8.35 M transferase
INCMDMJA_00532 7.4e-220 rny S Endoribonuclease that initiates mRNA decay
INCMDMJA_00533 4.2e-195 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
INCMDMJA_00534 1.1e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
INCMDMJA_00535 5.2e-97 ymfM S Helix-turn-helix domain
INCMDMJA_00536 2.3e-133 IQ Enoyl-(Acyl carrier protein) reductase
INCMDMJA_00537 1.9e-236 S Peptidase M16
INCMDMJA_00538 9e-223 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
INCMDMJA_00539 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
INCMDMJA_00540 1.7e-69 WQ51_03320 S Protein of unknown function (DUF1149)
INCMDMJA_00541 4.2e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
INCMDMJA_00542 2.6e-214 yubA S AI-2E family transporter
INCMDMJA_00543 2.2e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
INCMDMJA_00544 1.8e-200 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
INCMDMJA_00546 9.8e-42 M domain protein
INCMDMJA_00547 1.6e-42 M domain protein
INCMDMJA_00549 1.4e-24 srtA 3.4.22.70 M sortase family
INCMDMJA_00550 1.2e-22 S SLAP domain
INCMDMJA_00556 3.3e-11 S Single-strand binding protein family
INCMDMJA_00557 1.6e-10
INCMDMJA_00565 1.5e-26 S Domain of unknown function (DUF771)
INCMDMJA_00566 4e-21 K Conserved phage C-terminus (Phg_2220_C)
INCMDMJA_00568 4.1e-09 S Arc-like DNA binding domain
INCMDMJA_00570 9.8e-26 K Helix-turn-helix domain
INCMDMJA_00571 2.6e-21 2.3.1.19 K Helix-turn-helix XRE-family like proteins
INCMDMJA_00572 1.1e-17 K Helix-turn-helix XRE-family like proteins
INCMDMJA_00573 2.6e-09 S Pfam:DUF955
INCMDMJA_00574 3e-148 L Belongs to the 'phage' integrase family
INCMDMJA_00576 6.3e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
INCMDMJA_00577 1.9e-186 ytxK 2.1.1.72 L N-6 DNA Methylase
INCMDMJA_00578 1.6e-21
INCMDMJA_00579 3.8e-77 comGF U Putative Competence protein ComGF
INCMDMJA_00580 2.3e-41
INCMDMJA_00581 1.8e-69
INCMDMJA_00582 3.1e-43 comGC U competence protein ComGC
INCMDMJA_00583 1.7e-171 comGB NU type II secretion system
INCMDMJA_00584 1.7e-179 comGA NU Type II IV secretion system protein
INCMDMJA_00585 8.9e-133 yebC K Transcriptional regulatory protein
INCMDMJA_00586 7.6e-94 S VanZ like family
INCMDMJA_00587 3.5e-101 ylbE GM NAD(P)H-binding
INCMDMJA_00588 3.7e-27 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
INCMDMJA_00590 1.3e-160 L hmm pf00665
INCMDMJA_00591 5.8e-100 L Helix-turn-helix domain
INCMDMJA_00592 2e-310 E Amino acid permease
INCMDMJA_00594 1.8e-82 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
INCMDMJA_00595 2.2e-90 2.7.7.65 T GGDEF domain
INCMDMJA_00596 8.2e-36
INCMDMJA_00597 5.2e-112 ica2 GT2 M Glycosyl transferase family group 2
INCMDMJA_00598 3.7e-26 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
INCMDMJA_00599 1.9e-47 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
INCMDMJA_00600 1e-149 D Alpha beta
INCMDMJA_00601 1e-297 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
INCMDMJA_00602 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
INCMDMJA_00603 8.3e-143 licT K CAT RNA binding domain
INCMDMJA_00604 3.8e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
INCMDMJA_00605 7.4e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
INCMDMJA_00606 1.6e-118
INCMDMJA_00607 1.8e-75 K Penicillinase repressor
INCMDMJA_00608 1.4e-147 S hydrolase
INCMDMJA_00609 3.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
INCMDMJA_00610 2e-172 ybbR S YbbR-like protein
INCMDMJA_00611 6.4e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
INCMDMJA_00612 7.3e-208 potD P ABC transporter
INCMDMJA_00613 4.8e-127 potC P ABC transporter permease
INCMDMJA_00614 1.3e-129 potB P ABC transporter permease
INCMDMJA_00615 1.8e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
INCMDMJA_00616 2e-163 murB 1.3.1.98 M Cell wall formation
INCMDMJA_00617 4e-98 dnaQ 2.7.7.7 L DNA polymerase III
INCMDMJA_00618 7e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
INCMDMJA_00619 1.2e-180 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
INCMDMJA_00620 9.7e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
INCMDMJA_00621 3.4e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
INCMDMJA_00622 1.2e-94
INCMDMJA_00623 6e-199 L COG2826 Transposase and inactivated derivatives, IS30 family
INCMDMJA_00624 1.7e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
INCMDMJA_00625 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
INCMDMJA_00626 6.5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
INCMDMJA_00627 3.3e-189 cggR K Putative sugar-binding domain
INCMDMJA_00629 2.8e-290
INCMDMJA_00630 2.8e-216 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
INCMDMJA_00631 4.8e-34 S reductase
INCMDMJA_00632 4.4e-39 S reductase
INCMDMJA_00633 2.7e-32 S reductase
INCMDMJA_00634 1.3e-148 yxeH S hydrolase
INCMDMJA_00635 6.8e-181 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
INCMDMJA_00636 1.1e-243 yfnA E Amino Acid
INCMDMJA_00637 6.8e-110 dedA 3.1.3.1 S SNARE associated Golgi protein
INCMDMJA_00638 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
INCMDMJA_00639 5e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
INCMDMJA_00640 1.9e-291 I Acyltransferase
INCMDMJA_00641 5.4e-175 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
INCMDMJA_00642 5.1e-142 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
INCMDMJA_00643 1.5e-34 yrvD S Lipopolysaccharide assembly protein A domain
INCMDMJA_00644 1.3e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
INCMDMJA_00645 6.1e-131 sip L Belongs to the 'phage' integrase family
INCMDMJA_00648 1.6e-22 S Hypothetical protein (DUF2513)
INCMDMJA_00649 7.4e-20 S Pfam:Peptidase_M78
INCMDMJA_00650 2.8e-20 ps115 K sequence-specific DNA binding
INCMDMJA_00653 1.4e-16
INCMDMJA_00654 6.7e-75 ps308 K AntA/AntB antirepressor
INCMDMJA_00655 2.5e-14
INCMDMJA_00661 5e-30 S HNH endonuclease
INCMDMJA_00662 6.1e-70 S AAA domain
INCMDMJA_00664 2.1e-151 res L Helicase C-terminal domain protein
INCMDMJA_00666 4.2e-42 S Protein of unknown function (DUF669)
INCMDMJA_00667 1.4e-272 S Phage plasmid primase, P4
INCMDMJA_00675 6.4e-54 S Protein of unknown function (DUF3397)
INCMDMJA_00676 6.3e-78 mraZ K Belongs to the MraZ family
INCMDMJA_00677 7.2e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
INCMDMJA_00678 1.8e-54 ftsL D Cell division protein FtsL
INCMDMJA_00679 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
INCMDMJA_00680 1.5e-175 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
INCMDMJA_00681 5e-262 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
INCMDMJA_00682 3.7e-207 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
INCMDMJA_00683 4.5e-152 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
INCMDMJA_00684 1.3e-246 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
INCMDMJA_00685 1.7e-206 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
INCMDMJA_00686 7.3e-74 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
INCMDMJA_00687 1.7e-45 yggT S YGGT family
INCMDMJA_00688 5.7e-149 ylmH S S4 domain protein
INCMDMJA_00689 2.8e-74 gpsB D DivIVA domain protein
INCMDMJA_00690 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
INCMDMJA_00691 3.6e-31 cspA K 'Cold-shock' DNA-binding domain
INCMDMJA_00692 2.8e-102 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
INCMDMJA_00693 6.7e-37
INCMDMJA_00694 1.2e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
INCMDMJA_00695 3.2e-217 iscS 2.8.1.7 E Aminotransferase class V
INCMDMJA_00696 5.4e-56 XK27_04120 S Putative amino acid metabolism
INCMDMJA_00697 5.1e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
INCMDMJA_00698 3.9e-127 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
INCMDMJA_00699 8.3e-106 S Repeat protein
INCMDMJA_00700 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
INCMDMJA_00701 1.6e-294 L Nuclease-related domain
INCMDMJA_00702 2.3e-164 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
INCMDMJA_00703 9.9e-82 C Flavodoxin
INCMDMJA_00704 0.0 uvrA3 L excinuclease ABC, A subunit
INCMDMJA_00705 1.1e-189 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
INCMDMJA_00706 2.1e-114 3.6.1.27 I Acid phosphatase homologues
INCMDMJA_00707 7.4e-205 L COG2826 Transposase and inactivated derivatives, IS30 family
INCMDMJA_00708 1.9e-80 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
INCMDMJA_00709 1.4e-115 lacA 2.3.1.79 S Transferase hexapeptide repeat
INCMDMJA_00710 9.3e-204 pbpX1 V Beta-lactamase
INCMDMJA_00711 2.8e-98 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
INCMDMJA_00712 7.5e-95 S ECF-type riboflavin transporter, S component
INCMDMJA_00713 1.3e-229 S Putative peptidoglycan binding domain
INCMDMJA_00714 9e-83 K Acetyltransferase (GNAT) domain
INCMDMJA_00715 1.7e-251 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
INCMDMJA_00716 2.5e-191 yrvN L AAA C-terminal domain
INCMDMJA_00717 5.7e-65 spxA_2 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
INCMDMJA_00718 6.8e-153 treB G phosphotransferase system
INCMDMJA_00719 2.9e-110 treB G phosphotransferase system
INCMDMJA_00720 1.2e-100 treR K UTRA
INCMDMJA_00721 1e-288 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
INCMDMJA_00722 5.7e-18
INCMDMJA_00723 1.5e-239 G Bacterial extracellular solute-binding protein
INCMDMJA_00724 1e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
INCMDMJA_00725 1.1e-236 XK27_01810 S Calcineurin-like phosphoesterase
INCMDMJA_00727 0.0 S SLAP domain
INCMDMJA_00728 3.5e-54 trxA O Belongs to the thioredoxin family
INCMDMJA_00729 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
INCMDMJA_00730 1.1e-50 yrzB S Belongs to the UPF0473 family
INCMDMJA_00731 6.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
INCMDMJA_00732 2e-42 yrzL S Belongs to the UPF0297 family
INCMDMJA_00733 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
INCMDMJA_00734 2e-226 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
INCMDMJA_00735 1.4e-181 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
INCMDMJA_00736 6.2e-210 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
INCMDMJA_00737 9.6e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
INCMDMJA_00738 9.6e-41 yajC U Preprotein translocase
INCMDMJA_00739 1.5e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
INCMDMJA_00740 1.7e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
INCMDMJA_00741 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
INCMDMJA_00742 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
INCMDMJA_00743 5.9e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
INCMDMJA_00744 1.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
INCMDMJA_00745 3.5e-75
INCMDMJA_00746 2.3e-181 M CHAP domain
INCMDMJA_00747 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
INCMDMJA_00748 3.7e-295 scrB 3.2.1.26 GH32 G invertase
INCMDMJA_00749 1.1e-183 scrR K helix_turn _helix lactose operon repressor
INCMDMJA_00750 2.2e-125 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
INCMDMJA_00751 3.5e-166 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
INCMDMJA_00752 7.7e-162 2.7.7.12 C Domain of unknown function (DUF4931)
INCMDMJA_00753 1.3e-235 G Bacterial extracellular solute-binding protein
INCMDMJA_00754 6.3e-212 S Uncharacterized protein conserved in bacteria (DUF2325)
INCMDMJA_00755 5.6e-86
INCMDMJA_00756 1.1e-164 S Protein of unknown function (DUF2974)
INCMDMJA_00757 4.7e-109 glnP P ABC transporter permease
INCMDMJA_00758 3.7e-90 gluC P ABC transporter permease
INCMDMJA_00759 1.2e-146 glnH ET ABC transporter substrate-binding protein
INCMDMJA_00760 4.8e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
INCMDMJA_00761 3.8e-46 udk 2.7.1.48 F Zeta toxin
INCMDMJA_00762 9.8e-39 udk 2.7.1.48 F Zeta toxin
INCMDMJA_00763 1e-246 G MFS/sugar transport protein
INCMDMJA_00764 1.6e-100 S ABC-type cobalt transport system, permease component
INCMDMJA_00765 0.0 V ABC transporter transmembrane region
INCMDMJA_00766 6.9e-309 XK27_09600 V ABC transporter, ATP-binding protein
INCMDMJA_00767 1.4e-80 K Transcriptional regulator, MarR family
INCMDMJA_00768 1.9e-147 glnH ET ABC transporter
INCMDMJA_00769 1.9e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
INCMDMJA_00770 8.6e-243 steT E amino acid
INCMDMJA_00771 2.4e-26 steT E amino acid
INCMDMJA_00772 2.8e-202 steT E amino acid
INCMDMJA_00773 2.7e-138
INCMDMJA_00774 5.9e-174 S Aldo keto reductase
INCMDMJA_00775 1.1e-310 ybiT S ABC transporter, ATP-binding protein
INCMDMJA_00776 5.5e-149 pepA E M42 glutamyl aminopeptidase
INCMDMJA_00777 1.5e-205 cydA 1.10.3.14 C ubiquinol oxidase
INCMDMJA_00778 8.2e-177 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
INCMDMJA_00779 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
INCMDMJA_00780 2.4e-269 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
INCMDMJA_00781 2.2e-128 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
INCMDMJA_00782 5.5e-178 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
INCMDMJA_00783 1.1e-161 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
INCMDMJA_00784 2.4e-231 ndh 1.6.99.3 C NADH dehydrogenase
INCMDMJA_00785 6.2e-43 1.3.5.4 C FAD binding domain
INCMDMJA_00786 2.3e-84 3.6.4.12 S PD-(D/E)XK nuclease family transposase
INCMDMJA_00787 2.8e-168 K LysR substrate binding domain
INCMDMJA_00788 1.1e-121 3.6.1.27 I Acid phosphatase homologues
INCMDMJA_00789 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
INCMDMJA_00790 4.7e-275 ytgP S Polysaccharide biosynthesis protein
INCMDMJA_00791 6.3e-192 oppA E ABC transporter, substratebinding protein
INCMDMJA_00792 1.3e-30
INCMDMJA_00793 4.2e-145 pstS P Phosphate
INCMDMJA_00794 1.1e-159 pstC P probably responsible for the translocation of the substrate across the membrane
INCMDMJA_00795 1.2e-152 pstA P Phosphate transport system permease protein PstA
INCMDMJA_00796 1.3e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
INCMDMJA_00797 1.4e-105 phoU P Plays a role in the regulation of phosphate uptake
INCMDMJA_00798 4.3e-121 T Transcriptional regulatory protein, C terminal
INCMDMJA_00799 1.1e-282 phoR 2.7.13.3 T Histidine kinase
INCMDMJA_00800 2.2e-117 phoU P Plays a role in the regulation of phosphate uptake
INCMDMJA_00801 3.9e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
INCMDMJA_00802 5e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
INCMDMJA_00803 6.5e-154 pstA P Phosphate transport system permease protein PstA
INCMDMJA_00804 1.9e-162 pstC P probably responsible for the translocation of the substrate across the membrane
INCMDMJA_00805 2.8e-157 pstS P Phosphate
INCMDMJA_00806 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
INCMDMJA_00807 1.2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
INCMDMJA_00808 1.2e-100 nusG K Participates in transcription elongation, termination and antitermination
INCMDMJA_00809 3.6e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
INCMDMJA_00810 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
INCMDMJA_00811 8.4e-287 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
INCMDMJA_00812 1.7e-34
INCMDMJA_00813 1.2e-94 sigH K Belongs to the sigma-70 factor family
INCMDMJA_00814 1.7e-139 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
INCMDMJA_00815 5.1e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
INCMDMJA_00816 7.5e-277 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
INCMDMJA_00817 1.6e-290 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
INCMDMJA_00818 2.7e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
INCMDMJA_00819 1.8e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
INCMDMJA_00820 4.1e-52
INCMDMJA_00821 1e-267 pepC 3.4.22.40 E Peptidase C1-like family
INCMDMJA_00822 7.3e-44
INCMDMJA_00823 5.4e-183 S AAA domain
INCMDMJA_00824 2.6e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
INCMDMJA_00825 1.4e-23
INCMDMJA_00826 7.3e-161 czcD P cation diffusion facilitator family transporter
INCMDMJA_00827 3.7e-125 gpmB G Belongs to the phosphoglycerate mutase family
INCMDMJA_00828 6e-132 S membrane transporter protein
INCMDMJA_00829 3.3e-118 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
INCMDMJA_00830 6.3e-105 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
INCMDMJA_00831 9.6e-28 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
INCMDMJA_00832 0.0 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
INCMDMJA_00833 2e-116 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
INCMDMJA_00834 1.2e-232 oppA E ABC transporter substrate-binding protein
INCMDMJA_00835 2.1e-95 oppA E ABC transporter substrate-binding protein
INCMDMJA_00836 5.4e-176 K AI-2E family transporter
INCMDMJA_00837 2.6e-103 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
INCMDMJA_00838 4.1e-18
INCMDMJA_00839 4.1e-245 G Major Facilitator
INCMDMJA_00840 1.3e-79 E Zn peptidase
INCMDMJA_00841 1e-41 ps115 K Helix-turn-helix XRE-family like proteins
INCMDMJA_00842 5.6e-45
INCMDMJA_00843 4.5e-66 S Bacteriocin helveticin-J
INCMDMJA_00844 1.7e-66 S SLAP domain
INCMDMJA_00845 5.8e-45
INCMDMJA_00846 2.4e-136 XK27_08845 S ABC transporter, ATP-binding protein
INCMDMJA_00847 5.6e-121 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
INCMDMJA_00848 8.3e-174 ABC-SBP S ABC transporter
INCMDMJA_00849 5.6e-132 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
INCMDMJA_00850 2.8e-34 P CorA-like Mg2+ transporter protein
INCMDMJA_00851 5.2e-75 P CorA-like Mg2+ transporter protein
INCMDMJA_00852 3.5e-160 yvgN C Aldo keto reductase
INCMDMJA_00853 0.0 tetP J elongation factor G
INCMDMJA_00854 4e-150 3.1.3.102, 3.1.3.104 S haloacid dehalogenase-like hydrolase
INCMDMJA_00855 1.2e-134 EGP Major facilitator Superfamily
INCMDMJA_00857 1.7e-153 ydjP I Alpha/beta hydrolase family
INCMDMJA_00858 6.9e-195 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
INCMDMJA_00859 1.2e-43 citD C Covalent carrier of the coenzyme of citrate lyase
INCMDMJA_00860 2.4e-167 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
INCMDMJA_00861 2.1e-288 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
INCMDMJA_00862 9.3e-72 yeaL S Protein of unknown function (DUF441)
INCMDMJA_00863 3.5e-21
INCMDMJA_00864 3.6e-146 cbiQ P cobalt transport
INCMDMJA_00865 0.0 ykoD P ABC transporter, ATP-binding protein
INCMDMJA_00866 1.5e-95 S UPF0397 protein
INCMDMJA_00867 2.9e-66 S Domain of unknown function DUF1828
INCMDMJA_00868 5.5e-09
INCMDMJA_00869 1.5e-50
INCMDMJA_00870 2.6e-177 citR K Putative sugar-binding domain
INCMDMJA_00871 6.5e-249 yjjP S Putative threonine/serine exporter
INCMDMJA_00873 5.9e-37 M domain protein
INCMDMJA_00874 8.2e-85 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
INCMDMJA_00875 6.5e-176 prmA J Ribosomal protein L11 methyltransferase
INCMDMJA_00876 8.5e-60
INCMDMJA_00877 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
INCMDMJA_00878 6e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
INCMDMJA_00879 5.8e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
INCMDMJA_00880 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
INCMDMJA_00881 1.5e-222 patA 2.6.1.1 E Aminotransferase
INCMDMJA_00882 5.8e-112 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
INCMDMJA_00883 0.0 uup S ABC transporter, ATP-binding protein
INCMDMJA_00884 3.4e-284 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
INCMDMJA_00885 6.6e-182 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
INCMDMJA_00886 7e-43 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
INCMDMJA_00887 7.7e-22
INCMDMJA_00888 9.3e-64 L PFAM IS66 Orf2 family protein
INCMDMJA_00889 8.7e-34 S Transposase C of IS166 homeodomain
INCMDMJA_00890 1.9e-245 L Transposase IS66 family
INCMDMJA_00891 4.5e-194 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
INCMDMJA_00892 7.4e-97 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
INCMDMJA_00893 2.4e-133 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
INCMDMJA_00894 2.2e-85 S ECF transporter, substrate-specific component
INCMDMJA_00895 1.4e-130 fat 3.1.2.21 I Acyl-ACP thioesterase
INCMDMJA_00896 5.1e-156 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
INCMDMJA_00897 1.8e-59 yabA L Involved in initiation control of chromosome replication
INCMDMJA_00898 1.5e-155 holB 2.7.7.7 L DNA polymerase III
INCMDMJA_00899 8.9e-53 yaaQ S Cyclic-di-AMP receptor
INCMDMJA_00900 1.6e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
INCMDMJA_00901 1.1e-34 S Protein of unknown function (DUF2508)
INCMDMJA_00902 1.6e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
INCMDMJA_00903 8.2e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
INCMDMJA_00904 1.2e-35 M lipopolysaccharide 3-alpha-galactosyltransferase activity
INCMDMJA_00905 5.7e-106 2.4.1.58 GT8 M family 8
INCMDMJA_00906 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
INCMDMJA_00907 2.2e-90 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
INCMDMJA_00908 9e-26
INCMDMJA_00909 1.3e-116 rsmC 2.1.1.172 J Methyltransferase
INCMDMJA_00910 8.7e-140 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
INCMDMJA_00911 1.8e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
INCMDMJA_00912 7e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
INCMDMJA_00913 1.5e-11 GT2,GT4 M family 8
INCMDMJA_00914 5.1e-292 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
INCMDMJA_00915 1.5e-144 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
INCMDMJA_00916 1.7e-184 G Transmembrane secretion effector
INCMDMJA_00917 6.1e-136 V ABC transporter transmembrane region
INCMDMJA_00918 2.9e-224 L transposase, IS605 OrfB family
INCMDMJA_00919 5.2e-75 V ABC transporter transmembrane region
INCMDMJA_00920 6.5e-64 L RelB antitoxin
INCMDMJA_00921 2.1e-131 cobQ S glutamine amidotransferase
INCMDMJA_00922 1.8e-81 M NlpC/P60 family
INCMDMJA_00925 2.6e-155
INCMDMJA_00926 7.8e-38
INCMDMJA_00927 2e-32
INCMDMJA_00928 6.2e-163 EG EamA-like transporter family
INCMDMJA_00929 5e-165 EG EamA-like transporter family
INCMDMJA_00930 1.2e-139 yicL EG EamA-like transporter family
INCMDMJA_00931 4.3e-107
INCMDMJA_00932 1.1e-110
INCMDMJA_00933 5.8e-186 XK27_05540 S DUF218 domain
INCMDMJA_00934 9.3e-264 yheS_2 S ATPases associated with a variety of cellular activities
INCMDMJA_00935 4.7e-85
INCMDMJA_00936 3.9e-57
INCMDMJA_00937 4.7e-25 S Protein conserved in bacteria
INCMDMJA_00938 1.3e-54 S protein encoded in hypervariable junctions of pilus gene clusters
INCMDMJA_00940 6.1e-48 E Pfam:DUF955
INCMDMJA_00941 2.8e-23 relB L Addiction module antitoxin, RelB DinJ family
INCMDMJA_00942 9.6e-18 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
INCMDMJA_00944 1.3e-133 topA2 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
INCMDMJA_00946 4.9e-24 S CAAX protease self-immunity
INCMDMJA_00948 4.1e-34
INCMDMJA_00949 1e-66 doc S Fic/DOC family
INCMDMJA_00951 9.4e-51 L An automated process has identified a potential problem with this gene model
INCMDMJA_00952 7.9e-16 L An automated process has identified a potential problem with this gene model
INCMDMJA_00954 1.2e-24 2.7.1.200, 2.7.1.202 G phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2
INCMDMJA_00955 8.2e-204 gatC G PTS system sugar-specific permease component
INCMDMJA_00956 6.5e-18 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
INCMDMJA_00957 3.5e-57 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
INCMDMJA_00958 8.3e-123 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
INCMDMJA_00959 2.4e-99 L An automated process has identified a potential problem with this gene model
INCMDMJA_00960 3.3e-241 V N-6 DNA Methylase
INCMDMJA_00961 6.5e-82 bcgIB 2.1.1.72, 3.1.21.3 V Type I restriction modification DNA specificity domain
INCMDMJA_00962 1.6e-35 S Bacterial toxin of type II toxin-antitoxin system, YafQ
INCMDMJA_00963 3.2e-15 relB L RelB antitoxin
INCMDMJA_00964 8e-12 relB L RelB antitoxin
INCMDMJA_00965 2.2e-89
INCMDMJA_00966 3e-09 isdH M Iron Transport-associated domain
INCMDMJA_00967 6.3e-123 M Iron Transport-associated domain
INCMDMJA_00968 8.7e-159 isdE P Periplasmic binding protein
INCMDMJA_00969 9.5e-148 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
INCMDMJA_00970 6.7e-139 fhuC 3.6.3.34 HP abc transporter atp-binding protein
INCMDMJA_00971 6.7e-44 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
INCMDMJA_00972 3.4e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
INCMDMJA_00973 1.3e-38 S RelB antitoxin
INCMDMJA_00974 5.2e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
INCMDMJA_00975 0.0 S membrane
INCMDMJA_00976 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
INCMDMJA_00977 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
INCMDMJA_00978 2.7e-97 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
INCMDMJA_00979 4e-119 gluP 3.4.21.105 S Rhomboid family
INCMDMJA_00980 9.7e-36 yqgQ S Bacterial protein of unknown function (DUF910)
INCMDMJA_00981 1.5e-65 yqhL P Rhodanese-like protein
INCMDMJA_00982 1.5e-167 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
INCMDMJA_00983 7.6e-225 ynbB 4.4.1.1 P aluminum resistance
INCMDMJA_00984 2e-263 glnA 6.3.1.2 E glutamine synthetase
INCMDMJA_00985 6.7e-170
INCMDMJA_00986 6e-148
INCMDMJA_00987 2.5e-186 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
INCMDMJA_00988 1.7e-129 manY G PTS system
INCMDMJA_00989 1e-173 manN G system, mannose fructose sorbose family IID component
INCMDMJA_00990 1.1e-62 manO S Domain of unknown function (DUF956)
INCMDMJA_00991 3.3e-158 K Transcriptional regulator
INCMDMJA_00992 1.3e-85 maa S transferase hexapeptide repeat
INCMDMJA_00993 6.8e-243 cycA E Amino acid permease
INCMDMJA_00994 7.6e-49 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
INCMDMJA_00995 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
INCMDMJA_00996 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
INCMDMJA_00997 0.0 mtlR K Mga helix-turn-helix domain
INCMDMJA_00998 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
INCMDMJA_00999 2.1e-79 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
INCMDMJA_01000 1e-218 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
INCMDMJA_01001 3.2e-28 4.1.1.44 S Carboxymuconolactone decarboxylase family
INCMDMJA_01002 2.3e-78 4.1.1.44 S Carboxymuconolactone decarboxylase family
INCMDMJA_01003 2.1e-32
INCMDMJA_01004 3.7e-59 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
INCMDMJA_01005 2.3e-156 K Helix-turn-helix XRE-family like proteins
INCMDMJA_01006 0.0 fhaB M Rib/alpha-like repeat
INCMDMJA_01007 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
INCMDMJA_01008 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
INCMDMJA_01009 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
INCMDMJA_01010 9e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
INCMDMJA_01011 6.8e-209 msmX P Belongs to the ABC transporter superfamily
INCMDMJA_01012 3.8e-213 malE G Bacterial extracellular solute-binding protein
INCMDMJA_01013 1.1e-250 malF P Binding-protein-dependent transport system inner membrane component
INCMDMJA_01014 3.3e-147 malG P ABC transporter permease
INCMDMJA_01015 4.3e-67 K Helix-turn-helix XRE-family like proteins
INCMDMJA_01018 4.8e-28
INCMDMJA_01019 6.2e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
INCMDMJA_01020 6.4e-251 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
INCMDMJA_01021 7.7e-188 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
INCMDMJA_01024 3.9e-206 4.2.1.126 S Bacterial protein of unknown function (DUF871)
INCMDMJA_01025 3.2e-189 asnA 6.3.1.1 F aspartate--ammonia ligase
INCMDMJA_01026 1.8e-230 steT_1 E amino acid
INCMDMJA_01027 2.2e-139 puuD S peptidase C26
INCMDMJA_01029 2.4e-172 V HNH endonuclease
INCMDMJA_01030 6.4e-135 S PFAM Archaeal ATPase
INCMDMJA_01031 9.2e-248 yifK E Amino acid permease
INCMDMJA_01032 9.7e-234 cycA E Amino acid permease
INCMDMJA_01033 4.3e-115 lepB 3.4.21.89 U Belongs to the peptidase S26 family
INCMDMJA_01034 0.0 clpE O AAA domain (Cdc48 subfamily)
INCMDMJA_01035 2.2e-165 S Alpha/beta hydrolase of unknown function (DUF915)
INCMDMJA_01036 2.2e-238 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
INCMDMJA_01037 0.0 1.3.5.4 C FAD binding domain
INCMDMJA_01038 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
INCMDMJA_01039 1.7e-249 yhdP S Transporter associated domain
INCMDMJA_01040 3.9e-119 C nitroreductase
INCMDMJA_01041 2.1e-39
INCMDMJA_01042 2.9e-87 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
INCMDMJA_01043 1.6e-80
INCMDMJA_01044 4.1e-147 glvR K Helix-turn-helix domain, rpiR family
INCMDMJA_01045 0.0 glvC 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
INCMDMJA_01046 5.4e-147 S hydrolase
INCMDMJA_01047 2e-160 rssA S Phospholipase, patatin family
INCMDMJA_01048 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
INCMDMJA_01049 3.1e-136 glcR K DeoR C terminal sensor domain
INCMDMJA_01050 2.5e-59 S Enterocin A Immunity
INCMDMJA_01051 1.2e-154 S hydrolase
INCMDMJA_01052 2.8e-134 ydhQ K UbiC transcription regulator-associated domain protein
INCMDMJA_01053 9.1e-175 rihB 3.2.2.1 F Nucleoside
INCMDMJA_01054 0.0 kup P Transport of potassium into the cell
INCMDMJA_01055 2.9e-15 M LysM domain protein
INCMDMJA_01056 3.8e-48 M LysM domain protein
INCMDMJA_01057 1.4e-86 C Aldo keto reductase
INCMDMJA_01058 4.8e-181 lacX 5.1.3.3 G Aldose 1-epimerase
INCMDMJA_01059 8.2e-236 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
INCMDMJA_01060 1.9e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
INCMDMJA_01061 5e-141 xerC D Phage integrase, N-terminal SAM-like domain
INCMDMJA_01062 1.4e-248 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
INCMDMJA_01063 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
INCMDMJA_01064 5.8e-152 dprA LU DNA protecting protein DprA
INCMDMJA_01065 4.6e-132 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
INCMDMJA_01066 2.8e-154 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
INCMDMJA_01067 1.9e-94 yjcE P Sodium proton antiporter
INCMDMJA_01068 1.5e-40 yjcE P Sodium proton antiporter
INCMDMJA_01069 1.1e-66 yjcE P NhaP-type Na H and K H
INCMDMJA_01070 7.1e-36 yozE S Belongs to the UPF0346 family
INCMDMJA_01071 5.7e-147 DegV S Uncharacterised protein, DegV family COG1307
INCMDMJA_01072 1.2e-107 hlyIII S protein, hemolysin III
INCMDMJA_01073 1.1e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
INCMDMJA_01074 8.8e-159 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
INCMDMJA_01075 4.3e-86 3.4.21.96 S SLAP domain
INCMDMJA_01076 6.4e-190 yagE E Amino acid permease
INCMDMJA_01077 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
INCMDMJA_01078 9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
INCMDMJA_01079 2.1e-106 rplD J Forms part of the polypeptide exit tunnel
INCMDMJA_01080 3.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
INCMDMJA_01081 3.6e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
INCMDMJA_01082 1.1e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
INCMDMJA_01083 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
INCMDMJA_01084 2.7e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
INCMDMJA_01085 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
INCMDMJA_01086 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
INCMDMJA_01087 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
INCMDMJA_01088 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
INCMDMJA_01089 3.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
INCMDMJA_01090 5.5e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
INCMDMJA_01091 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
INCMDMJA_01092 3.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
INCMDMJA_01093 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
INCMDMJA_01094 3.6e-55 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
INCMDMJA_01095 4.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
INCMDMJA_01096 2.3e-24 rpmD J Ribosomal protein L30
INCMDMJA_01097 1.3e-70 rplO J Binds to the 23S rRNA
INCMDMJA_01098 1.4e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
INCMDMJA_01099 3.5e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
INCMDMJA_01100 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
INCMDMJA_01101 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
INCMDMJA_01102 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
INCMDMJA_01103 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
INCMDMJA_01104 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
INCMDMJA_01105 1.4e-60 rplQ J Ribosomal protein L17
INCMDMJA_01106 1.4e-153 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
INCMDMJA_01107 3.5e-157 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
INCMDMJA_01108 8.5e-137 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
INCMDMJA_01109 4.8e-148 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
INCMDMJA_01110 5.9e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
INCMDMJA_01111 5.1e-66 rpsI J Belongs to the universal ribosomal protein uS9 family
INCMDMJA_01112 8.9e-133 L Phage integrase family
INCMDMJA_01113 3.1e-240 oppA E ABC transporter substrate-binding protein
INCMDMJA_01114 2.1e-308 oppA E ABC transporter substrate-binding protein
INCMDMJA_01115 1.9e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
INCMDMJA_01116 0.0 smc D Required for chromosome condensation and partitioning
INCMDMJA_01117 3.6e-161 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
INCMDMJA_01118 2.5e-288 pipD E Dipeptidase
INCMDMJA_01120 3.4e-23
INCMDMJA_01121 4.1e-133 cysA V ABC transporter, ATP-binding protein
INCMDMJA_01122 0.0 V FtsX-like permease family
INCMDMJA_01123 2.7e-258 yfnA E amino acid
INCMDMJA_01124 6e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
INCMDMJA_01125 4.9e-228 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
INCMDMJA_01126 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
INCMDMJA_01127 3.4e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
INCMDMJA_01128 3.2e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
INCMDMJA_01129 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
INCMDMJA_01130 1.1e-56 S Protein of unknown function (DUF3290)
INCMDMJA_01131 3e-116 yviA S Protein of unknown function (DUF421)
INCMDMJA_01132 9e-158 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
INCMDMJA_01133 8e-182 dnaQ 2.7.7.7 L EXOIII
INCMDMJA_01134 1.9e-158 endA F DNA RNA non-specific endonuclease
INCMDMJA_01135 1.3e-281 pipD E Dipeptidase
INCMDMJA_01136 1.9e-203 malK P ATPases associated with a variety of cellular activities
INCMDMJA_01137 1.6e-157 gtsB P ABC-type sugar transport systems, permease components
INCMDMJA_01138 1.8e-145 gtsC P Binding-protein-dependent transport system inner membrane component
INCMDMJA_01139 9.2e-258 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
INCMDMJA_01140 6.7e-240 G Bacterial extracellular solute-binding protein
INCMDMJA_01141 1.8e-154 corA P CorA-like Mg2+ transporter protein
INCMDMJA_01142 3.3e-148 3.5.2.6 V Beta-lactamase enzyme family
INCMDMJA_01143 6.6e-99 yobS K Bacterial regulatory proteins, tetR family
INCMDMJA_01144 0.0 ydgH S MMPL family
INCMDMJA_01146 7.8e-26 K Acetyltransferase (GNAT) domain
INCMDMJA_01147 1.8e-163
INCMDMJA_01148 9.9e-177 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
INCMDMJA_01149 5.5e-77 nrdI F NrdI Flavodoxin like
INCMDMJA_01150 4.7e-221 tnpB L Putative transposase DNA-binding domain
INCMDMJA_01151 3.3e-112
INCMDMJA_01152 2.9e-279 S O-antigen ligase like membrane protein
INCMDMJA_01153 3.9e-42
INCMDMJA_01154 2.2e-88 gmk2 2.7.4.8 F Guanylate kinase homologues.
INCMDMJA_01155 5e-88 M NlpC/P60 family
INCMDMJA_01156 6.3e-134 M NlpC P60 family protein
INCMDMJA_01157 2.6e-118 M NlpC/P60 family
INCMDMJA_01158 1.6e-41
INCMDMJA_01159 3.5e-175 S Cysteine-rich secretory protein family
INCMDMJA_01160 3.8e-216 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
INCMDMJA_01162 1.9e-176 brpA K Cell envelope-like function transcriptional attenuator common domain protein
INCMDMJA_01163 6.5e-146 epsB M biosynthesis protein
INCMDMJA_01164 1.3e-121 ywqD 2.7.10.1 D Capsular exopolysaccharide family
INCMDMJA_01165 1.4e-144 ywqE 3.1.3.48 GM PHP domain protein
INCMDMJA_01166 6.7e-110 rfbP M Bacterial sugar transferase
INCMDMJA_01167 1.9e-117 cps1D M Domain of unknown function (DUF4422)
INCMDMJA_01168 2.2e-113 S SLAP domain
INCMDMJA_01169 2.6e-51 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
INCMDMJA_01170 5.7e-46 S An automated process has identified a potential problem with this gene model
INCMDMJA_01171 3e-137 S Protein of unknown function (DUF3100)
INCMDMJA_01172 4e-245 3.5.1.47 S Peptidase dimerisation domain
INCMDMJA_01173 5.8e-230 Q Imidazolonepropionase and related amidohydrolases
INCMDMJA_01174 0.0 oppA E ABC transporter
INCMDMJA_01175 1.2e-151 S Sucrose-6F-phosphate phosphohydrolase
INCMDMJA_01176 0.0 mco Q Multicopper oxidase
INCMDMJA_01177 1.9e-25
INCMDMJA_01178 1.9e-158 metQ1 P Belongs to the nlpA lipoprotein family
INCMDMJA_01179 4.3e-169 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
INCMDMJA_01180 2.4e-62 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
INCMDMJA_01181 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
INCMDMJA_01182 7.1e-200 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
INCMDMJA_01183 1.9e-89 ydiM G Major facilitator superfamily
INCMDMJA_01184 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
INCMDMJA_01185 1.3e-148
INCMDMJA_01186 3e-310 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
INCMDMJA_01187 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
INCMDMJA_01188 2.6e-34 rpsT J Binds directly to 16S ribosomal RNA
INCMDMJA_01189 9.7e-175 holA 2.7.7.7 L DNA polymerase III delta subunit
INCMDMJA_01190 0.0 comEC S Competence protein ComEC
INCMDMJA_01191 3.1e-79 comEA L Competence protein ComEA
INCMDMJA_01192 1.2e-186 ylbL T Belongs to the peptidase S16 family
INCMDMJA_01193 3.6e-82 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
INCMDMJA_01194 4.5e-97 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
INCMDMJA_01195 5.1e-54 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
INCMDMJA_01196 5.9e-211 ftsW D Belongs to the SEDS family
INCMDMJA_01197 0.0 typA T GTP-binding protein TypA
INCMDMJA_01198 8.9e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
INCMDMJA_01199 3.5e-32 ykzG S Belongs to the UPF0356 family
INCMDMJA_01200 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
INCMDMJA_01201 6e-112
INCMDMJA_01203 1.7e-110 E Belongs to the SOS response-associated peptidase family
INCMDMJA_01204 3.7e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
INCMDMJA_01205 4e-89 comEB 3.5.4.12 F MafB19-like deaminase
INCMDMJA_01206 2e-103 S TPM domain
INCMDMJA_01207 2.4e-132 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
INCMDMJA_01208 2.5e-311 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
INCMDMJA_01209 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
INCMDMJA_01210 1e-147 tatD L hydrolase, TatD family
INCMDMJA_01211 1e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
INCMDMJA_01212 6.7e-151 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
INCMDMJA_01213 4.5e-39 veg S Biofilm formation stimulator VEG
INCMDMJA_01214 3.2e-147 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
INCMDMJA_01215 2.6e-173 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
INCMDMJA_01216 4e-80
INCMDMJA_01217 7.8e-292 S SLAP domain
INCMDMJA_01218 6e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
INCMDMJA_01219 3.7e-263 V ABC-type multidrug transport system, ATPase and permease components
INCMDMJA_01220 1.2e-250 yifK E Amino acid permease
INCMDMJA_01221 1.3e-179 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
INCMDMJA_01222 1.5e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
INCMDMJA_01223 0.0 aha1 P E1-E2 ATPase
INCMDMJA_01224 2.4e-175 F DNA/RNA non-specific endonuclease
INCMDMJA_01225 5.9e-160 metQ2 P Belongs to the nlpA lipoprotein family
INCMDMJA_01226 2.6e-189 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
INCMDMJA_01227 3.4e-73 metI P ABC transporter permease
INCMDMJA_01228 9e-267 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
INCMDMJA_01229 9.5e-261 frdC 1.3.5.4 C FAD binding domain
INCMDMJA_01230 3.1e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
INCMDMJA_01231 3.5e-252 pepC 3.4.22.40 E Peptidase C1-like family
INCMDMJA_01232 5.6e-36
INCMDMJA_01233 3.3e-183 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
INCMDMJA_01234 8.4e-125 luxT K Bacterial regulatory proteins, tetR family
INCMDMJA_01235 2.8e-135
INCMDMJA_01236 1.3e-258 glnPH2 P ABC transporter permease
INCMDMJA_01237 2.6e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
INCMDMJA_01238 6.4e-224 S Cysteine-rich secretory protein family
INCMDMJA_01239 1.2e-205 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
INCMDMJA_01240 1.4e-112
INCMDMJA_01241 6.3e-202 yibE S overlaps another CDS with the same product name
INCMDMJA_01242 4.9e-129 yibF S overlaps another CDS with the same product name
INCMDMJA_01243 2.5e-144 I alpha/beta hydrolase fold
INCMDMJA_01244 0.0 G Belongs to the glycosyl hydrolase 31 family
INCMDMJA_01245 4.1e-217 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
INCMDMJA_01246 1.3e-159 degV S EDD domain protein, DegV family
INCMDMJA_01247 1.1e-66
INCMDMJA_01248 0.0 FbpA K Fibronectin-binding protein
INCMDMJA_01249 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
INCMDMJA_01250 1e-198 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
INCMDMJA_01251 9.6e-169 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
INCMDMJA_01252 8e-79 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
INCMDMJA_01253 6.7e-285 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
INCMDMJA_01254 5.5e-53
INCMDMJA_01256 2.7e-34 S YSIRK type signal peptide
INCMDMJA_01257 1.9e-110 F DNA/RNA non-specific endonuclease
INCMDMJA_01258 9.8e-75 S cog cog0433
INCMDMJA_01259 4.9e-99 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
INCMDMJA_01261 7.8e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
INCMDMJA_01262 2.4e-43 K Helix-turn-helix
INCMDMJA_01263 9e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
INCMDMJA_01264 1.5e-223 pbuX F xanthine permease
INCMDMJA_01265 3.7e-156 msmR K AraC-like ligand binding domain
INCMDMJA_01266 5.7e-285 pipD E Dipeptidase
INCMDMJA_01267 1.8e-74 K acetyltransferase
INCMDMJA_01268 9.6e-247 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
INCMDMJA_01269 6.7e-311 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
INCMDMJA_01270 1.5e-46 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
INCMDMJA_01271 6.9e-69 S Domain of unknown function (DUF1934)
INCMDMJA_01272 3.6e-268 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
INCMDMJA_01273 5.6e-43
INCMDMJA_01274 4.2e-172 2.7.1.2 GK ROK family
INCMDMJA_01275 1.2e-16
INCMDMJA_01276 2.1e-255 S Archaea bacterial proteins of unknown function
INCMDMJA_01277 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
INCMDMJA_01278 3e-270 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
INCMDMJA_01279 1e-24
INCMDMJA_01280 9.5e-26
INCMDMJA_01281 2.5e-33
INCMDMJA_01282 1.4e-53 S Enterocin A Immunity
INCMDMJA_01283 8e-145 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
INCMDMJA_01284 5.5e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
INCMDMJA_01285 6.6e-207 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
INCMDMJA_01286 9.6e-121 K response regulator
INCMDMJA_01288 0.0 V ABC transporter
INCMDMJA_01289 4.2e-144 V ABC transporter, ATP-binding protein
INCMDMJA_01290 1.2e-145 V ABC transporter, ATP-binding protein
INCMDMJA_01291 1.9e-15 S Domain of unknown function DUF1829
INCMDMJA_01292 1.1e-265
INCMDMJA_01293 1.9e-72 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
INCMDMJA_01294 4.3e-153 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
INCMDMJA_01295 3.9e-25
INCMDMJA_01296 8.3e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
INCMDMJA_01297 5.7e-135 ecsA V ABC transporter, ATP-binding protein
INCMDMJA_01298 6.5e-221 ecsB U ABC transporter
INCMDMJA_01299 3.3e-126 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
INCMDMJA_01301 2.8e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
INCMDMJA_01302 1.8e-121 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
INCMDMJA_01303 9.7e-247 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
INCMDMJA_01304 6.9e-218 mepA V MATE efflux family protein
INCMDMJA_01305 1.8e-176 S SLAP domain
INCMDMJA_01306 4.4e-283 M Peptidase family M1 domain
INCMDMJA_01307 4.5e-188 S Bacteriocin helveticin-J
INCMDMJA_01309 1.6e-08
INCMDMJA_01310 1.6e-08
INCMDMJA_01311 1.4e-83 K FR47-like protein
INCMDMJA_01312 1.1e-297 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
INCMDMJA_01313 2e-194 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
INCMDMJA_01314 9.7e-166 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
INCMDMJA_01315 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
INCMDMJA_01316 2.6e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
INCMDMJA_01317 1.8e-62 yabR J S1 RNA binding domain
INCMDMJA_01318 6.8e-60 divIC D Septum formation initiator
INCMDMJA_01319 1.6e-33 yabO J S4 domain protein
INCMDMJA_01320 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
INCMDMJA_01321 5.1e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
INCMDMJA_01322 1.5e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
INCMDMJA_01323 3.4e-129 S (CBS) domain
INCMDMJA_01324 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
INCMDMJA_01325 2.1e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
INCMDMJA_01326 1.2e-144 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
INCMDMJA_01327 2.7e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
INCMDMJA_01328 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
INCMDMJA_01329 1.6e-244 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
INCMDMJA_01330 4.2e-182 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
INCMDMJA_01331 2.6e-35 yaaA S S4 domain protein YaaA
INCMDMJA_01332 1.1e-209 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
INCMDMJA_01333 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
INCMDMJA_01334 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
INCMDMJA_01335 9.4e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
INCMDMJA_01336 4.5e-78 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
INCMDMJA_01337 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
INCMDMJA_01338 2e-10 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
INCMDMJA_01339 9.5e-82 XK27_04435 3.5.4.5 J FR47-like protein
INCMDMJA_01340 1.4e-36 S Cytochrome B5
INCMDMJA_01341 6e-168 arbZ I Phosphate acyltransferases
INCMDMJA_01342 1.6e-182 arbY M Glycosyl transferase family 8
INCMDMJA_01343 5e-184 arbY M Glycosyl transferase family 8
INCMDMJA_01344 5e-156 arbx M Glycosyl transferase family 8
INCMDMJA_01345 1.6e-148 arbV 2.3.1.51 I Acyl-transferase
INCMDMJA_01347 4.9e-34
INCMDMJA_01349 4.8e-131 K response regulator
INCMDMJA_01350 2.2e-305 vicK 2.7.13.3 T Histidine kinase
INCMDMJA_01351 1.6e-257 yycH S YycH protein
INCMDMJA_01352 3.4e-149 yycI S YycH protein
INCMDMJA_01353 4.1e-147 vicX 3.1.26.11 S domain protein
INCMDMJA_01354 1.6e-161 htrA 3.4.21.107 O serine protease
INCMDMJA_01355 1e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
INCMDMJA_01356 1.9e-175 oppF P Belongs to the ABC transporter superfamily
INCMDMJA_01357 2.7e-199 oppD P Belongs to the ABC transporter superfamily
INCMDMJA_01358 8e-188 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
INCMDMJA_01359 1.1e-146 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
INCMDMJA_01360 3.1e-209 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
INCMDMJA_01361 1.3e-309 oppA E ABC transporter, substratebinding protein
INCMDMJA_01362 1.7e-301 oppA E ABC transporter, substratebinding protein
INCMDMJA_01363 1.3e-122 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
INCMDMJA_01364 4.6e-257 pepC 3.4.22.40 E aminopeptidase
INCMDMJA_01366 3.4e-53
INCMDMJA_01367 4.5e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
INCMDMJA_01368 8.4e-265 S Fibronectin type III domain
INCMDMJA_01370 5.4e-215 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
INCMDMJA_01371 6.5e-180 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
INCMDMJA_01372 0.0 yjbQ P TrkA C-terminal domain protein
INCMDMJA_01373 1.7e-106 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
INCMDMJA_01374 2.1e-161 S Oxidoreductase family, NAD-binding Rossmann fold
INCMDMJA_01375 2.1e-130
INCMDMJA_01376 2.1e-116
INCMDMJA_01377 5e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
INCMDMJA_01378 1.4e-98 G Aldose 1-epimerase
INCMDMJA_01379 2.6e-200 brpA K Cell envelope-like function transcriptional attenuator common domain protein
INCMDMJA_01380 1.6e-111 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
INCMDMJA_01381 0.0 XK27_08315 M Sulfatase
INCMDMJA_01382 2.3e-48 S SLAP domain
INCMDMJA_01383 3.5e-136 S SLAP domain
INCMDMJA_01384 2.8e-210
INCMDMJA_01385 1.2e-18
INCMDMJA_01386 7e-248 EGP Sugar (and other) transporter
INCMDMJA_01387 1.2e-105
INCMDMJA_01388 8.2e-114 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
INCMDMJA_01389 0.0 copA 3.6.3.54 P P-type ATPase
INCMDMJA_01390 1.8e-44 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
INCMDMJA_01391 9.2e-57 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
INCMDMJA_01392 2.4e-36
INCMDMJA_01395 1.8e-31
INCMDMJA_01396 4.6e-138
INCMDMJA_01397 2.6e-151 V ABC transporter transmembrane region
INCMDMJA_01398 1.4e-37 S Putative adhesin
INCMDMJA_01399 3.6e-88 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
INCMDMJA_01400 7.7e-10 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
INCMDMJA_01401 2.9e-109 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
INCMDMJA_01402 1.7e-36 axe1 3.1.1.41 Q Acetyl xylan esterase (AXE1)
INCMDMJA_01403 1.1e-59 axe1 3.1.1.41 Q Acetyl xylan esterase (AXE1)
INCMDMJA_01404 1e-220 nanT E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
INCMDMJA_01405 1.9e-121 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
INCMDMJA_01406 2.3e-56 G Xylose isomerase domain protein TIM barrel
INCMDMJA_01407 8.4e-90 nanK GK ROK family
INCMDMJA_01408 2.9e-122 nanA 4.1.3.3, 4.3.3.7 EM Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
INCMDMJA_01409 3.7e-66 K Helix-turn-helix domain, rpiR family
INCMDMJA_01410 7.1e-263 E ABC transporter, substratebinding protein
INCMDMJA_01411 9.1e-10 K peptidyl-tyrosine sulfation
INCMDMJA_01413 1.2e-128 S interspecies interaction between organisms
INCMDMJA_01414 2.7e-34
INCMDMJA_01417 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
INCMDMJA_01418 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
INCMDMJA_01419 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
INCMDMJA_01420 3.6e-120 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
INCMDMJA_01421 7.8e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
INCMDMJA_01422 2.7e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
INCMDMJA_01423 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
INCMDMJA_01426 1.7e-195 ampC V Beta-lactamase
INCMDMJA_01427 4.9e-217 EGP Major facilitator Superfamily
INCMDMJA_01428 3.2e-253 pgi 5.3.1.9 G Belongs to the GPI family
INCMDMJA_01429 1.1e-104 vanZ V VanZ like family
INCMDMJA_01430 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
INCMDMJA_01431 7.2e-267 yclK 2.7.13.3, 4.6.1.1 T Histidine kinase
INCMDMJA_01432 4.4e-129 K Transcriptional regulatory protein, C terminal
INCMDMJA_01433 7.7e-67 S SdpI/YhfL protein family
INCMDMJA_01434 7.2e-191 manA 5.3.1.8 G mannose-6-phosphate isomerase
INCMDMJA_01435 9.9e-227 patB 4.4.1.8 E Aminotransferase, class I
INCMDMJA_01436 2.5e-89 M Protein of unknown function (DUF3737)
INCMDMJA_01438 1e-15 S Domain of Unknown Function with PDB structure (DUF3850)
INCMDMJA_01441 1.2e-191 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
INCMDMJA_01442 3e-80 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
INCMDMJA_01443 1.9e-122 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
INCMDMJA_01444 1.1e-128 accA 2.1.3.15, 6.4.1.2 I alpha subunit
INCMDMJA_01445 3.3e-139 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
INCMDMJA_01446 9.6e-237 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
INCMDMJA_01447 9.2e-61 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
INCMDMJA_01448 2.2e-49 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
INCMDMJA_01449 4e-210 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
INCMDMJA_01450 2.9e-107 IQ reductase
INCMDMJA_01451 1.7e-139 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
INCMDMJA_01452 2.1e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
INCMDMJA_01453 2.9e-38 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
INCMDMJA_01454 1.1e-86 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
INCMDMJA_01455 1.3e-48 4.2.1.59 I 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
INCMDMJA_01456 1.6e-73 marR K Transcriptional regulator, MarR family
INCMDMJA_01457 1.5e-80
INCMDMJA_01458 7.8e-39 yjeM E Amino Acid
INCMDMJA_01459 3.4e-175 yjeM E Amino Acid
INCMDMJA_01460 2.3e-192 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
INCMDMJA_01461 1.3e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
INCMDMJA_01462 1.3e-246 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
INCMDMJA_01463 2.8e-75 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
INCMDMJA_01464 2e-219 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
INCMDMJA_01465 9.8e-177 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
INCMDMJA_01466 7e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
INCMDMJA_01467 2.7e-216 aspC 2.6.1.1 E Aminotransferase
INCMDMJA_01468 8.6e-137 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
INCMDMJA_01469 2.7e-51 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
INCMDMJA_01470 2.1e-194 pbpX1 V Beta-lactamase
INCMDMJA_01471 2.1e-166 I Protein of unknown function (DUF2974)
INCMDMJA_01472 1e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
INCMDMJA_01473 1.7e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
INCMDMJA_01474 4e-249 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
INCMDMJA_01475 1.2e-258 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
INCMDMJA_01476 2.5e-39 rpmE2 J Ribosomal protein L31
INCMDMJA_01477 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
INCMDMJA_01478 2.6e-157 S Sucrose-6F-phosphate phosphohydrolase
INCMDMJA_01479 9.5e-297 ybeC E amino acid
INCMDMJA_01480 6.4e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
INCMDMJA_01481 2.1e-42
INCMDMJA_01482 1.4e-51
INCMDMJA_01483 1.4e-184 5.3.3.2 C FMN-dependent dehydrogenase
INCMDMJA_01484 1.3e-141 yfeO P Voltage gated chloride channel
INCMDMJA_01485 3.1e-148 glcU U sugar transport
INCMDMJA_01486 1.4e-249 lctP C L-lactate permease
INCMDMJA_01487 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
INCMDMJA_01488 6.4e-212 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
INCMDMJA_01489 8.8e-245 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
INCMDMJA_01490 3.6e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
INCMDMJA_01491 7.2e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
INCMDMJA_01492 9.1e-167 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
INCMDMJA_01493 1.6e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
INCMDMJA_01494 1.9e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
INCMDMJA_01495 1.5e-102 GM NmrA-like family
INCMDMJA_01496 5.6e-191 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
INCMDMJA_01498 2e-178 MA20_14895 S Conserved hypothetical protein 698
INCMDMJA_01499 1.1e-83 dps P Belongs to the Dps family
INCMDMJA_01500 3.8e-20 1.3.5.4 C FAD dependent oxidoreductase
INCMDMJA_01501 5.6e-101 yihX 3.1.3.10, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
INCMDMJA_01502 1.8e-58 S Putative adhesin
INCMDMJA_01503 3.5e-71 yjaB 2.3.1.181 K Acetyltransferase (GNAT) domain
INCMDMJA_01504 2e-234 mepA V MATE efflux family protein
INCMDMJA_01505 7.8e-10 3.6.3.2, 3.6.3.6 P cation transport ATPase
INCMDMJA_01506 4.4e-35 3.6.3.2, 3.6.3.6 P cation transport ATPase
INCMDMJA_01507 2.5e-264 3.6.3.6 P Cation transporter/ATPase, N-terminus
INCMDMJA_01508 1.9e-19
INCMDMJA_01509 4e-98 rihB 3.2.2.1 F Nucleoside
INCMDMJA_01510 3.2e-72 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
INCMDMJA_01511 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
INCMDMJA_01512 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
INCMDMJA_01513 6.9e-152 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
INCMDMJA_01514 9.2e-201 tnpB L Putative transposase DNA-binding domain
INCMDMJA_01515 4.2e-84 yqeG S HAD phosphatase, family IIIA
INCMDMJA_01516 4.4e-200 yqeH S Ribosome biogenesis GTPase YqeH
INCMDMJA_01517 4.4e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
INCMDMJA_01518 4.3e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
INCMDMJA_01519 5.3e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
INCMDMJA_01520 1.7e-215 ylbM S Belongs to the UPF0348 family
INCMDMJA_01521 4.7e-97 yceD S Uncharacterized ACR, COG1399
INCMDMJA_01522 1.2e-126 K response regulator
INCMDMJA_01523 1.3e-277 arlS 2.7.13.3 T Histidine kinase
INCMDMJA_01524 4e-210 yttB EGP Major facilitator Superfamily
INCMDMJA_01525 1.5e-230 XK27_04775 S PAS domain
INCMDMJA_01526 4.5e-103 S Iron-sulfur cluster assembly protein
INCMDMJA_01527 8.7e-141 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
INCMDMJA_01528 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
INCMDMJA_01529 5.6e-255 yxbA 6.3.1.12 S ATP-grasp enzyme
INCMDMJA_01530 0.0 asnB 6.3.5.4 E Asparagine synthase
INCMDMJA_01531 1.7e-273 S Calcineurin-like phosphoesterase
INCMDMJA_01532 3.9e-84
INCMDMJA_01533 1.6e-105 tag 3.2.2.20 L glycosylase
INCMDMJA_01534 4.1e-172 L COG3385 FOG Transposase and inactivated derivatives
INCMDMJA_01535 0.0 snf 2.7.11.1 KL domain protein
INCMDMJA_01536 3.5e-109 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
INCMDMJA_01537 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
INCMDMJA_01538 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
INCMDMJA_01539 2.8e-182 K Transcriptional regulator
INCMDMJA_01540 4.4e-169 ppaC 3.6.1.1 C inorganic pyrophosphatase
INCMDMJA_01542 1.4e-59 XK27_01125 L IS66 Orf2 like protein
INCMDMJA_01543 1.2e-11 S Transposase C of IS166 homeodomain
INCMDMJA_01544 1.3e-12 L TIGRFAM transposase, IS605 OrfB family
INCMDMJA_01545 1.3e-29 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
INCMDMJA_01547 1.6e-25 K Helix-turn-helix XRE-family like proteins
INCMDMJA_01548 1.2e-11
INCMDMJA_01549 1.5e-216 2.1.1.14 E methionine synthase, vitamin-B12 independent
INCMDMJA_01550 6.7e-89 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
INCMDMJA_01551 2e-264 lctP C L-lactate permease
INCMDMJA_01552 5e-129 znuB U ABC 3 transport family
INCMDMJA_01553 1.6e-117 fhuC P ABC transporter
INCMDMJA_01554 1.6e-147 psaA P Belongs to the bacterial solute-binding protein 9 family
INCMDMJA_01555 5.4e-41 K helix_turn_helix, Arsenical Resistance Operon Repressor
INCMDMJA_01556 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
INCMDMJA_01557 2.2e-168 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
INCMDMJA_01558 1.8e-136 fruR K DeoR C terminal sensor domain
INCMDMJA_01559 2.5e-68
INCMDMJA_01560 9.1e-112 yvpB S Peptidase_C39 like family
INCMDMJA_01561 1.1e-83 S Threonine/Serine exporter, ThrE
INCMDMJA_01562 2.4e-136 thrE S Putative threonine/serine exporter
INCMDMJA_01563 8.9e-292 S ABC transporter
INCMDMJA_01564 8.3e-58
INCMDMJA_01565 5e-72 rimL J Acetyltransferase (GNAT) domain
INCMDMJA_01566 1.4e-34
INCMDMJA_01567 1.2e-30
INCMDMJA_01568 1.8e-111 S Protein of unknown function (DUF554)
INCMDMJA_01569 8.7e-197 brpA K Cell envelope-like function transcriptional attenuator common domain protein
INCMDMJA_01570 0.0 pepF E oligoendopeptidase F
INCMDMJA_01571 2.9e-31
INCMDMJA_01572 1.3e-69 doc S Prophage maintenance system killer protein
INCMDMJA_01575 4.6e-27 S Enterocin A Immunity
INCMDMJA_01576 1.7e-22 blpT
INCMDMJA_01577 9e-121
INCMDMJA_01578 1.9e-157 2.7.7.12 C Domain of unknown function (DUF4931)
INCMDMJA_01579 3.9e-186 S Putative peptidoglycan binding domain
INCMDMJA_01580 4e-16
INCMDMJA_01581 2.1e-92 liaI S membrane
INCMDMJA_01582 6.6e-70 XK27_02470 K LytTr DNA-binding domain
INCMDMJA_01583 1.2e-18 S Sugar efflux transporter for intercellular exchange
INCMDMJA_01584 1.3e-250 dtpT U amino acid peptide transporter
INCMDMJA_01585 0.0 pepN 3.4.11.2 E aminopeptidase
INCMDMJA_01586 2.8e-47 lysM M LysM domain
INCMDMJA_01587 1.3e-174
INCMDMJA_01588 1.7e-152 mdtG EGP Major facilitator Superfamily
INCMDMJA_01589 6.9e-47 mdtG EGP Major facilitator Superfamily
INCMDMJA_01590 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
INCMDMJA_01591 2.3e-245 ynbB 4.4.1.1 P aluminum resistance
INCMDMJA_01592 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
INCMDMJA_01593 1.6e-282 E Amino acid permease
INCMDMJA_01594 6.3e-93 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
INCMDMJA_01595 1.4e-272 pepV 3.5.1.18 E dipeptidase PepV
INCMDMJA_01596 1.4e-115 mmuP E amino acid
INCMDMJA_01597 5e-13 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
INCMDMJA_01598 1e-63 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
INCMDMJA_01599 3e-66 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
INCMDMJA_01600 3.1e-150 xerD L Phage integrase, N-terminal SAM-like domain
INCMDMJA_01601 1.9e-19 L Replication initiation factor
INCMDMJA_01602 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
INCMDMJA_01603 9.3e-74 nrdI F NrdI Flavodoxin like
INCMDMJA_01604 3.6e-193 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
INCMDMJA_01605 1.1e-109 tnpR1 L Resolvase, N terminal domain
INCMDMJA_01606 4.7e-70 L IS1381, transposase OrfA
INCMDMJA_01607 1.1e-76 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
INCMDMJA_01608 1.3e-28
INCMDMJA_01609 1.7e-142 soj D AAA domain
INCMDMJA_01610 1.9e-166 repA S Replication initiator protein A
INCMDMJA_01611 1.2e-17
INCMDMJA_01612 1.9e-309 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
INCMDMJA_01613 2e-70 S Iron-sulphur cluster biosynthesis
INCMDMJA_01614 7.5e-192 ybiR P Citrate transporter
INCMDMJA_01615 5.1e-96 lemA S LemA family
INCMDMJA_01616 8.3e-157 htpX O Belongs to the peptidase M48B family
INCMDMJA_01617 7.9e-174 K helix_turn_helix, arabinose operon control protein
INCMDMJA_01618 4.8e-249 cbiO1 S ABC transporter, ATP-binding protein
INCMDMJA_01619 2.8e-77 P Cobalt transport protein
INCMDMJA_01620 1.8e-175 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
INCMDMJA_01621 6.5e-91 G Peptidase_C39 like family
INCMDMJA_01622 2.8e-162 M NlpC/P60 family
INCMDMJA_01623 6.4e-25 G Peptidase_C39 like family
INCMDMJA_01624 6.6e-41 sagD S YcaO cyclodehydratase, ATP-ad Mg2+-binding
INCMDMJA_01625 5.1e-56
INCMDMJA_01626 1.1e-68 sagB C Nitroreductase family
INCMDMJA_01627 3.4e-09
INCMDMJA_01628 2.9e-46 V Transport permease protein
INCMDMJA_01629 2.5e-62 yfiL V ABC transporter
INCMDMJA_01631 9.5e-220 L Belongs to the 'phage' integrase family
INCMDMJA_01632 2.3e-26
INCMDMJA_01633 3.9e-55
INCMDMJA_01634 2.2e-140 S Replication initiation factor
INCMDMJA_01635 1.4e-134 D Ftsk spoiiie family protein
INCMDMJA_01636 2.6e-84
INCMDMJA_01637 6.9e-64
INCMDMJA_01638 1.4e-18 K Helix-turn-helix XRE-family like proteins
INCMDMJA_01640 1.9e-116 yhiD S MgtC family
INCMDMJA_01641 4.2e-92 S SNARE associated Golgi protein
INCMDMJA_01642 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
INCMDMJA_01643 6.4e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
INCMDMJA_01644 3.8e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
INCMDMJA_01645 1.2e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
INCMDMJA_01646 6.8e-110 yjbK S CYTH
INCMDMJA_01647 4.6e-114 yjbH Q Thioredoxin
INCMDMJA_01648 1.4e-158 coiA 3.6.4.12 S Competence protein
INCMDMJA_01649 8.5e-139 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
INCMDMJA_01650 3.9e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
INCMDMJA_01651 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
INCMDMJA_01652 8.5e-41 ptsH G phosphocarrier protein HPR
INCMDMJA_01653 5.3e-26
INCMDMJA_01654 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
INCMDMJA_01655 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
INCMDMJA_01656 1.7e-29 secG U Preprotein translocase
INCMDMJA_01657 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
INCMDMJA_01658 1.4e-176 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
INCMDMJA_01659 7.6e-202 cpoA GT4 M Glycosyltransferase, group 1 family protein
INCMDMJA_01660 7.9e-224 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
INCMDMJA_01674 3e-37
INCMDMJA_01675 2.4e-110 K WHG domain
INCMDMJA_01676 1.9e-95 nqr 1.5.1.36 S NADPH-dependent FMN reductase
INCMDMJA_01677 2e-97 azr 1.5.1.36 S NADPH-dependent FMN reductase
INCMDMJA_01678 6e-151 3.1.3.48 T Tyrosine phosphatase family
INCMDMJA_01679 2.5e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
INCMDMJA_01681 3e-53 cvpA S Colicin V production protein
INCMDMJA_01682 1.2e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
INCMDMJA_01683 1.5e-147 noc K Belongs to the ParB family
INCMDMJA_01684 3.4e-138 soj D Sporulation initiation inhibitor
INCMDMJA_01685 8.5e-154 spo0J K Belongs to the ParB family
INCMDMJA_01686 9.6e-45 yyzM S Bacterial protein of unknown function (DUF951)
INCMDMJA_01687 3.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
INCMDMJA_01688 3.8e-137 XK27_01040 S Protein of unknown function (DUF1129)
INCMDMJA_01689 8e-51 L RelB antitoxin
INCMDMJA_01690 7.4e-105 qmcA O prohibitin homologues
INCMDMJA_01691 3.5e-25 qmcA O prohibitin homologues
INCMDMJA_01692 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
INCMDMJA_01693 4.2e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
INCMDMJA_01694 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
INCMDMJA_01695 3.5e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
INCMDMJA_01696 5.1e-251 dnaB L Replication initiation and membrane attachment
INCMDMJA_01697 1.3e-168 dnaI L Primosomal protein DnaI
INCMDMJA_01698 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
INCMDMJA_01699 1e-48 S Metal binding domain of Ada
INCMDMJA_01700 0.0 mgtA 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
INCMDMJA_01701 9e-137 lysR5 K LysR substrate binding domain
INCMDMJA_01702 5.7e-233 arcA 3.5.3.6 E Arginine
INCMDMJA_01703 4.3e-66 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
INCMDMJA_01704 2e-105 argF 2.1.3.3, 2.7.2.2 E Belongs to the carbamate kinase family
INCMDMJA_01705 9.2e-95 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
INCMDMJA_01706 2.3e-215 S Sterol carrier protein domain
INCMDMJA_01707 1e-20
INCMDMJA_01708 4.9e-108 K LysR substrate binding domain
INCMDMJA_01709 9e-98
INCMDMJA_01710 3e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
INCMDMJA_01711 0.0 clpE O Belongs to the ClpA ClpB family
INCMDMJA_01712 2.3e-44 XK27_09445 S Domain of unknown function (DUF1827)
INCMDMJA_01713 9.4e-305 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
INCMDMJA_01714 1.4e-140 hlyX S Transporter associated domain
INCMDMJA_01715 2.7e-74
INCMDMJA_01716 1.6e-85
INCMDMJA_01717 1.5e-144 recX 2.4.1.337 GT4 S Regulatory protein RecX
INCMDMJA_01718 3e-262 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
INCMDMJA_01719 1.4e-118 D Alpha beta
INCMDMJA_01720 1.8e-38 D Alpha beta
INCMDMJA_01721 9.4e-46
INCMDMJA_01722 9.6e-103 pgm3 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
INCMDMJA_01723 4.4e-258 lysC 2.7.2.4 E Belongs to the aspartokinase family
INCMDMJA_01724 2.6e-280 thrC 4.2.3.1 E Threonine synthase
INCMDMJA_01725 6.6e-221 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
INCMDMJA_01726 2.8e-157 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
INCMDMJA_01727 9.4e-118
INCMDMJA_01728 4.6e-160 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
INCMDMJA_01730 1.8e-104 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
INCMDMJA_01731 1.3e-116 S Peptidase family M23
INCMDMJA_01732 6.4e-71 scrR K Periplasmic binding protein domain
INCMDMJA_01733 5.5e-36
INCMDMJA_01734 2e-196 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
INCMDMJA_01735 1.1e-288 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
INCMDMJA_01736 1.1e-220 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
INCMDMJA_01737 3.8e-115 lacZ 3.2.1.23 G -beta-galactosidase
INCMDMJA_01738 1.3e-205 lacZ 3.2.1.23 G -beta-galactosidase
INCMDMJA_01739 0.0 lacS G Transporter
INCMDMJA_01740 3.2e-165 lacR K Transcriptional regulator
INCMDMJA_01741 1.1e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
INCMDMJA_01742 3.3e-275 yjeM E Amino Acid
INCMDMJA_01743 5.8e-83 S Fic/DOC family
INCMDMJA_01744 2.7e-285
INCMDMJA_01745 3.2e-77
INCMDMJA_01746 2.3e-87 S Protein of unknown function (DUF805)
INCMDMJA_01747 2.8e-67 O OsmC-like protein
INCMDMJA_01748 9.4e-209 EGP Major facilitator Superfamily
INCMDMJA_01749 2.5e-215 sptS 2.7.13.3 T Histidine kinase
INCMDMJA_01750 1.2e-241 S response to antibiotic
INCMDMJA_01751 4.9e-125
INCMDMJA_01752 0.0 3.6.3.8 P P-type ATPase
INCMDMJA_01753 1.8e-50 3.6.3.8 P P-type ATPase
INCMDMJA_01754 8.7e-66 2.7.1.191 G PTS system fructose IIA component
INCMDMJA_01755 4.4e-43
INCMDMJA_01756 5.9e-09
INCMDMJA_01757 9.4e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
INCMDMJA_01758 5.3e-136 glvR K Helix-turn-helix domain, rpiR family
INCMDMJA_01759 2.7e-268 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
INCMDMJA_01760 1.4e-126 pgm3 G Phosphoglycerate mutase family
INCMDMJA_01761 5.6e-118 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
INCMDMJA_01762 0.0 helD 3.6.4.12 L DNA helicase
INCMDMJA_01763 1.5e-107 glnP P ABC transporter permease
INCMDMJA_01764 1e-105 glnQ 3.6.3.21 E ABC transporter
INCMDMJA_01765 1.6e-143 aatB ET ABC transporter substrate-binding protein
INCMDMJA_01766 7.5e-74 yjcF S Acetyltransferase (GNAT) domain
INCMDMJA_01767 7.1e-98 E GDSL-like Lipase/Acylhydrolase
INCMDMJA_01768 2.5e-169 coaA 2.7.1.33 F Pantothenic acid kinase
INCMDMJA_01769 1.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
INCMDMJA_01770 8.8e-58 S Peptidase propeptide and YPEB domain
INCMDMJA_01771 7.5e-183 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
INCMDMJA_01772 6.8e-116 dedA S SNARE-like domain protein
INCMDMJA_01773 3.7e-100 S Protein of unknown function (DUF1461)
INCMDMJA_01774 3.4e-143 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
INCMDMJA_01775 2.1e-92 yutD S Protein of unknown function (DUF1027)
INCMDMJA_01776 5.8e-274 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
INCMDMJA_01777 4.3e-55
INCMDMJA_01778 2.3e-267 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
INCMDMJA_01779 3.2e-181 ccpA K catabolite control protein A
INCMDMJA_01780 7e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
INCMDMJA_01781 2.9e-23
INCMDMJA_01782 1.9e-186 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
INCMDMJA_01783 0.0 L AAA domain
INCMDMJA_01784 1e-226 yhaO L Ser Thr phosphatase family protein
INCMDMJA_01785 7.2e-56 yheA S Belongs to the UPF0342 family
INCMDMJA_01786 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
INCMDMJA_01787 4.2e-150 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
INCMDMJA_01788 8.8e-29
INCMDMJA_01791 4.9e-111 K Helix-turn-helix XRE-family like proteins
INCMDMJA_01792 2.5e-75 K Helix-turn-helix domain
INCMDMJA_01793 1.5e-25 S CAAX protease self-immunity
INCMDMJA_01794 1.4e-22 S CAAX protease self-immunity
INCMDMJA_01795 7.6e-26 WQ51_00220 K Helix-turn-helix XRE-family like proteins
INCMDMJA_01797 1.6e-96 ybaT E Amino acid permease
INCMDMJA_01798 1.7e-07 S LPXTG cell wall anchor motif
INCMDMJA_01799 4.4e-146 S Putative ABC-transporter type IV
INCMDMJA_01800 6.5e-277 V ABC transporter transmembrane region
INCMDMJA_01801 2.1e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
INCMDMJA_01802 3.1e-130 T Transcriptional regulatory protein, C terminal
INCMDMJA_01803 5.2e-187 T GHKL domain
INCMDMJA_01804 3.4e-76 S Peptidase propeptide and YPEB domain
INCMDMJA_01805 2.5e-72 S Peptidase propeptide and YPEB domain
INCMDMJA_01806 4.7e-83 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
INCMDMJA_01807 3.8e-65 yybA 2.3.1.57 K Transcriptional regulator
INCMDMJA_01808 7e-68 V ABC transporter transmembrane region
INCMDMJA_01809 9e-161 V ABC transporter transmembrane region
INCMDMJA_01810 4.6e-171 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
INCMDMJA_01811 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
INCMDMJA_01812 6.7e-98 M ErfK YbiS YcfS YnhG
INCMDMJA_01813 2.8e-154 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
INCMDMJA_01814 1.3e-240 dacA 3.4.16.4 M Belongs to the peptidase S11 family
INCMDMJA_01816 4.7e-46 pspC KT PspC domain
INCMDMJA_01817 2.1e-135 UW LPXTG-motif cell wall anchor domain protein
INCMDMJA_01818 1.3e-161 UW LPXTG-motif cell wall anchor domain protein
INCMDMJA_01819 3.3e-45 UW LPXTG-motif cell wall anchor domain protein
INCMDMJA_01820 9.1e-10 UW LPXTG-motif cell wall anchor domain protein
INCMDMJA_01821 1.3e-248 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
INCMDMJA_01822 7.5e-100 J Acetyltransferase (GNAT) domain
INCMDMJA_01823 1.4e-110 yjbF S SNARE associated Golgi protein
INCMDMJA_01824 6e-151 I alpha/beta hydrolase fold
INCMDMJA_01825 7e-87 gtcA S Teichoic acid glycosylation protein
INCMDMJA_01826 4.1e-80 fld C Flavodoxin
INCMDMJA_01827 1.4e-163 map 3.4.11.18 E Methionine Aminopeptidase
INCMDMJA_01828 3.6e-163 yihY S Belongs to the UPF0761 family
INCMDMJA_01829 2.1e-168 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
INCMDMJA_01830 5.6e-214 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
INCMDMJA_01831 3.6e-215 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
INCMDMJA_01832 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
INCMDMJA_01833 4.5e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
INCMDMJA_01834 1e-107 ypsA S Belongs to the UPF0398 family
INCMDMJA_01835 1.1e-68 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
INCMDMJA_01836 3.6e-218 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
INCMDMJA_01837 1e-242 cpdA S Calcineurin-like phosphoesterase
INCMDMJA_01838 3.4e-79
INCMDMJA_01839 2.8e-140 sufC O FeS assembly ATPase SufC
INCMDMJA_01840 3.5e-174 sufD O FeS assembly protein SufD
INCMDMJA_01841 5.3e-178 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
INCMDMJA_01842 2.4e-59 nifU C SUF system FeS assembly protein, NifU family
INCMDMJA_01843 2e-266 sufB O assembly protein SufB
INCMDMJA_01844 5.3e-45 yitW S Iron-sulfur cluster assembly protein
INCMDMJA_01845 2.9e-247 mntH P H( )-stimulated, divalent metal cation uptake system
INCMDMJA_01846 5.2e-08
INCMDMJA_01847 3e-89 ntd 2.4.2.6 F Nucleoside
INCMDMJA_01848 2.5e-86 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
INCMDMJA_01849 7.5e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
INCMDMJA_01850 1.8e-81 uspA T universal stress protein
INCMDMJA_01852 1.2e-161 phnD P Phosphonate ABC transporter
INCMDMJA_01853 3e-139 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
INCMDMJA_01854 1.4e-120 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
INCMDMJA_01855 1.3e-148 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
INCMDMJA_01856 0.0 hsdR 3.1.21.3 L DEAD/DEAH box helicase
INCMDMJA_01857 1.2e-164 S AAA domain, putative AbiEii toxin, Type IV TA system
INCMDMJA_01858 3.4e-42 S RloB-like protein
INCMDMJA_01859 1.9e-259 hsdM 2.1.1.72 V type I restriction-modification system
INCMDMJA_01862 1.7e-67 L Resolvase, N terminal domain
INCMDMJA_01863 1.9e-81 dnaQ 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
INCMDMJA_01865 8.8e-37 D Antitoxin component of a toxin-antitoxin (TA) module
INCMDMJA_01866 3.9e-54 S ParE toxin of type II toxin-antitoxin system, parDE
INCMDMJA_01867 5.8e-73 S domain protein
INCMDMJA_01869 4.9e-251 ade 3.5.4.2 F Adenine deaminase C-terminal domain
INCMDMJA_01870 3e-145 potD2 P ABC transporter
INCMDMJA_01871 1.6e-135 potA11 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
INCMDMJA_01872 2.2e-108 potC3 E Binding-protein-dependent transport system inner membrane component
INCMDMJA_01873 7.4e-93 fabK 1.3.1.9 S Nitronate monooxygenase
INCMDMJA_01874 1.6e-82 2.8.3.1 I Coenzyme A transferase
INCMDMJA_01875 5.8e-151 2.8.3.1 I Coenzyme A transferase
INCMDMJA_01876 3.7e-144 gltC_1 3.1.3.48 K LysR substrate binding domain
INCMDMJA_01877 1.5e-54 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
INCMDMJA_01878 3.2e-75 S ECF transporter, substrate-specific component
INCMDMJA_01879 3.8e-80 coaA 2.7.1.33 F Pantothenic acid kinase
INCMDMJA_01880 1.4e-31 O OsmC-like protein
INCMDMJA_01882 6.2e-288 P ABC transporter
INCMDMJA_01883 4.3e-36
INCMDMJA_01885 1.4e-124 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
INCMDMJA_01886 2.5e-86 K GNAT family
INCMDMJA_01887 2.7e-202 XK27_00915 C Luciferase-like monooxygenase
INCMDMJA_01888 2.9e-122 rbtT P Major Facilitator Superfamily
INCMDMJA_01889 4.2e-63 lmrB EGP Major facilitator Superfamily
INCMDMJA_01890 3.9e-128 S CAAX protease self-immunity
INCMDMJA_01891 8e-224 S SLAP domain
INCMDMJA_01892 1.2e-54 S Abi-like protein
INCMDMJA_01893 1.5e-72 S Aminoacyl-tRNA editing domain
INCMDMJA_01894 2.2e-163 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
INCMDMJA_01895 2.9e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
INCMDMJA_01896 5e-134 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
INCMDMJA_01897 8.8e-62 yodB K Transcriptional regulator, HxlR family
INCMDMJA_01899 1.4e-109 yniG EGP Major facilitator Superfamily
INCMDMJA_01900 5.4e-237 L transposase, IS605 OrfB family
INCMDMJA_01901 4.5e-76 yniG EGP Major facilitator Superfamily
INCMDMJA_01902 4.9e-35
INCMDMJA_01904 1.3e-42
INCMDMJA_01905 1.9e-75 M LysM domain
INCMDMJA_01906 2.5e-40 relB L Addiction module antitoxin, RelB DinJ family
INCMDMJA_01907 3.1e-16 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
INCMDMJA_01908 1.8e-48 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
INCMDMJA_01910 1.9e-83 K Transcriptional regulator
INCMDMJA_01911 6.1e-61 K Transcriptional regulator
INCMDMJA_01912 2e-225 S cog cog1373
INCMDMJA_01913 9.7e-146 S haloacid dehalogenase-like hydrolase
INCMDMJA_01914 2.5e-226 pbuG S permease
INCMDMJA_01915 1.5e-304 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
INCMDMJA_01916 5.4e-203 xerS L Belongs to the 'phage' integrase family
INCMDMJA_01917 4.1e-67
INCMDMJA_01918 8e-111 XK27_00160 S Domain of unknown function (DUF5052)
INCMDMJA_01919 5.8e-211 M Glycosyl hydrolases family 25
INCMDMJA_01920 1.8e-158 xth 3.1.11.2 L exodeoxyribonuclease III
INCMDMJA_01921 1.3e-273 E amino acid
INCMDMJA_01922 0.0 L Helicase C-terminal domain protein
INCMDMJA_01923 1.1e-65 pbpX1 V Beta-lactamase
INCMDMJA_01924 9.3e-86
INCMDMJA_01925 2.5e-283 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
INCMDMJA_01926 7.7e-182 S Alpha/beta hydrolase of unknown function (DUF915)
INCMDMJA_01927 3e-147 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
INCMDMJA_01928 4.4e-140 ypuA S Protein of unknown function (DUF1002)
INCMDMJA_01929 3.7e-156 epsV 2.7.8.12 S glycosyl transferase family 2
INCMDMJA_01930 2.7e-117 S Alpha/beta hydrolase family
INCMDMJA_01931 1.3e-273 pipD E Dipeptidase
INCMDMJA_01932 1.5e-102 devA 3.6.3.25 V ABC transporter, ATP-binding protein
INCMDMJA_01933 3.3e-176 hrtB V ABC transporter permease
INCMDMJA_01934 3.2e-92 ygfC K Bacterial regulatory proteins, tetR family
INCMDMJA_01935 3.5e-111 G phosphoglycerate mutase
INCMDMJA_01936 4.1e-141 aroD S Alpha/beta hydrolase family
INCMDMJA_01937 2.2e-142 S Belongs to the UPF0246 family
INCMDMJA_01938 4.3e-228 amtB P ammonium transporter
INCMDMJA_01939 1.4e-60
INCMDMJA_01940 0.0 lhr L DEAD DEAH box helicase
INCMDMJA_01941 1.4e-245 P P-loop Domain of unknown function (DUF2791)
INCMDMJA_01942 2.6e-138 S TerB-C domain
INCMDMJA_01943 4.7e-72 S SLAP domain
INCMDMJA_01944 6.7e-19 3.6.4.12 S PD-(D/E)XK nuclease family transposase
INCMDMJA_01945 2.1e-144 3.6.4.12 S PD-(D/E)XK nuclease family transposase
INCMDMJA_01946 1.1e-25
INCMDMJA_01947 1.4e-76 K DNA-templated transcription, initiation
INCMDMJA_01948 5.3e-41
INCMDMJA_01949 0.0 L Plasmid pRiA4b ORF-3-like protein
INCMDMJA_01950 3.9e-246 brnQ U Component of the transport system for branched-chain amino acids
INCMDMJA_01951 2.8e-119 3.6.1.55 F NUDIX domain
INCMDMJA_01952 3.1e-113 ltrA S Bacterial low temperature requirement A protein (LtrA)
INCMDMJA_01953 3.4e-135 glnQ E ABC transporter, ATP-binding protein
INCMDMJA_01954 6.7e-290 glnP P ABC transporter permease
INCMDMJA_01955 4e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
INCMDMJA_01956 5.8e-64 yeaO S Protein of unknown function, DUF488
INCMDMJA_01957 1.3e-124 terC P Integral membrane protein TerC family
INCMDMJA_01958 9.2e-92 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
INCMDMJA_01959 8.5e-133 cobB K SIR2 family
INCMDMJA_01960 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
INCMDMJA_01961 3.5e-145 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
INCMDMJA_01962 5.3e-189 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
INCMDMJA_01963 7.6e-163 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
INCMDMJA_01964 2e-106 K Transcriptional regulator, AbiEi antitoxin
INCMDMJA_01965 3.9e-23 S domain protein
INCMDMJA_01966 1.7e-168 V ABC transporter
INCMDMJA_01967 7.7e-39 S Protein of unknown function (DUF3021)
INCMDMJA_01968 4.2e-53 K LytTr DNA-binding domain
INCMDMJA_01971 3e-107 L Transposase
INCMDMJA_01972 7.4e-95 L Transposase
INCMDMJA_01973 2.6e-180 S Domain of unknown function (DUF389)
INCMDMJA_01974 3.6e-39 C FMN_bind
INCMDMJA_01975 1.5e-81
INCMDMJA_01976 1.3e-176 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
INCMDMJA_01977 2e-85 alkD L DNA alkylation repair enzyme
INCMDMJA_01978 9.9e-293 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
INCMDMJA_01979 6.4e-128 K UTRA domain
INCMDMJA_01980 1e-54 celA1 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
INCMDMJA_01983 1.8e-79
INCMDMJA_01984 2.1e-78 2.7.13.3 T GHKL domain
INCMDMJA_01985 2.9e-79 K LytTr DNA-binding domain
INCMDMJA_01986 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
INCMDMJA_01987 5.7e-43 2.4.1.33 V HlyD family secretion protein
INCMDMJA_01989 1e-20 S Enterocin A Immunity
INCMDMJA_01990 1.3e-36
INCMDMJA_01991 9.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
INCMDMJA_01992 3.7e-146 ykuT M mechanosensitive ion channel
INCMDMJA_01993 6.9e-100 V ATPases associated with a variety of cellular activities
INCMDMJA_01994 1.7e-139
INCMDMJA_01995 5.4e-113
INCMDMJA_01996 0.0 kup P Transport of potassium into the cell
INCMDMJA_01997 7.3e-74
INCMDMJA_01998 2.1e-45 S PFAM Archaeal ATPase
INCMDMJA_02000 3.7e-58 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
INCMDMJA_02001 5.9e-45
INCMDMJA_02002 8.2e-85 scrR K Periplasmic binding protein domain
INCMDMJA_02003 0.0 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
INCMDMJA_02004 6.3e-54 S COG0790 FOG TPR repeat, SEL1 subfamily
INCMDMJA_02005 5.5e-38 L Protein of unknown function (DUF3991)
INCMDMJA_02006 2.1e-111 S Fic/DOC family
INCMDMJA_02007 2.6e-61 M Glycosyl hydrolases family 25
INCMDMJA_02008 1.3e-61 M Glycosyl hydrolases family 25
INCMDMJA_02009 2.8e-211 yfmL 3.6.4.13 L DEAD DEAH box helicase
INCMDMJA_02010 4.7e-249 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
INCMDMJA_02012 2e-216 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
INCMDMJA_02013 1.1e-106 S Bacteriocin helveticin-J
INCMDMJA_02014 1.2e-44
INCMDMJA_02015 3.7e-58 ps115 K Helix-turn-helix XRE-family like proteins
INCMDMJA_02016 4e-32 E Zn peptidase
INCMDMJA_02017 3.9e-287 clcA P chloride
INCMDMJA_02018 3.7e-243 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
INCMDMJA_02019 5e-48 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
INCMDMJA_02020 6.9e-116 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
INCMDMJA_02021 9.7e-52 S Iron-sulfur cluster assembly protein
INCMDMJA_02022 3.8e-154 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
INCMDMJA_02023 1.3e-122 sdaAB 4.3.1.17 E Serine dehydratase beta chain
INCMDMJA_02024 1e-105 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
INCMDMJA_02025 1.4e-107 M Transport protein ComB
INCMDMJA_02026 2.2e-129 blpT
INCMDMJA_02030 3e-21
INCMDMJA_02031 0.0 L PLD-like domain
INCMDMJA_02032 4.8e-42 S SnoaL-like domain
INCMDMJA_02033 5.4e-53 hipB K sequence-specific DNA binding
INCMDMJA_02034 8e-22 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
INCMDMJA_02035 2.2e-120 lsa S ABC transporter
INCMDMJA_02036 1.7e-201 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
INCMDMJA_02037 3.1e-107 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
INCMDMJA_02038 7.7e-227 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
INCMDMJA_02039 4.1e-214 2.7.1.208, 2.7.1.211 G phosphotransferase system
INCMDMJA_02040 1.8e-119 S Putative esterase
INCMDMJA_02041 3.6e-120 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
INCMDMJA_02042 1.3e-79 ybbH_2 K Helix-turn-helix domain, rpiR family
INCMDMJA_02043 7.1e-237 L transposase, IS605 OrfB family
INCMDMJA_02044 2.1e-28 S Peptidase propeptide and YPEB domain
INCMDMJA_02045 2.4e-60 ypaA S Protein of unknown function (DUF1304)
INCMDMJA_02046 2.3e-309 oppA3 E ABC transporter, substratebinding protein
INCMDMJA_02047 4.1e-156 crtI 1.3.99.23, 5.2.1.13 Q HI0933-like protein
INCMDMJA_02048 4.3e-52 K helix_turn_helix gluconate operon transcriptional repressor
INCMDMJA_02049 3.6e-140 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
INCMDMJA_02051 6.2e-165 psaA P Belongs to the bacterial solute-binding protein 9 family
INCMDMJA_02054 1.7e-221 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
INCMDMJA_02055 8.5e-260 qacA EGP Major facilitator Superfamily
INCMDMJA_02056 4.3e-24 S SLAP domain
INCMDMJA_02057 7.6e-25 S SLAP domain
INCMDMJA_02059 4.5e-77 sagD S YcaO cyclodehydratase, ATP-ad Mg2+-binding
INCMDMJA_02060 7.6e-239 pyrP F Permease
INCMDMJA_02061 8.8e-90 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
INCMDMJA_02062 9.2e-262 emrY EGP Major facilitator Superfamily
INCMDMJA_02063 1.8e-275 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
INCMDMJA_02064 9.5e-31
INCMDMJA_02065 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
INCMDMJA_02066 1.4e-34
INCMDMJA_02067 3.6e-63
INCMDMJA_02070 4.9e-118
INCMDMJA_02071 3.8e-104 pncA Q Isochorismatase family
INCMDMJA_02073 2e-35
INCMDMJA_02074 1.9e-253 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
INCMDMJA_02075 5.7e-69 rplI J Binds to the 23S rRNA
INCMDMJA_02076 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
INCMDMJA_02077 4.5e-189 ydaM M Glycosyl transferase
INCMDMJA_02078 4e-177 G Glycosyl hydrolases family 8
INCMDMJA_02079 1e-119 yfbR S HD containing hydrolase-like enzyme
INCMDMJA_02080 6.4e-159 L HNH nucleases
INCMDMJA_02081 3.3e-164 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
INCMDMJA_02082 5.2e-170 degV S DegV family
INCMDMJA_02083 1.1e-135 V ABC transporter transmembrane region
INCMDMJA_02084 6.3e-77 S cog cog1373
INCMDMJA_02085 5.6e-179 S PFAM Archaeal ATPase
INCMDMJA_02086 4.5e-192 I transferase activity, transferring acyl groups other than amino-acyl groups
INCMDMJA_02087 7.4e-128 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
INCMDMJA_02088 1.8e-218 natB CP ABC-2 family transporter protein
INCMDMJA_02089 1.1e-164 natA S ABC transporter, ATP-binding protein
INCMDMJA_02090 1.7e-67
INCMDMJA_02091 2e-23
INCMDMJA_02092 8.2e-31 yozG K Transcriptional regulator
INCMDMJA_02093 9.5e-72
INCMDMJA_02094 4.4e-42 S Fic/DOC family
INCMDMJA_02095 5.4e-60 L Resolvase, N-terminal
INCMDMJA_02096 1.1e-165 L Putative transposase DNA-binding domain
INCMDMJA_02097 1e-190 L Transposase and inactivated derivatives, IS30 family
INCMDMJA_02098 1.6e-132 2.7.13.3 T GHKL domain
INCMDMJA_02099 1.2e-127 K LytTr DNA-binding domain
INCMDMJA_02100 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
INCMDMJA_02101 3.7e-102 V ABC transporter transmembrane region
INCMDMJA_02102 5.3e-76 M Glycosyltransferase, group 1 family protein
INCMDMJA_02103 1.2e-80 glfT1 1.1.1.133 S Glycosyltransferase, group 2 family protein
INCMDMJA_02104 8.2e-44 S O-antigen ligase like membrane protein
INCMDMJA_02105 1.8e-228 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
INCMDMJA_02106 8.7e-86 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
INCMDMJA_02107 3.2e-139 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
INCMDMJA_02109 1.8e-81 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
INCMDMJA_02110 3.7e-92 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
INCMDMJA_02111 3e-130 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
INCMDMJA_02112 1.1e-39 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
INCMDMJA_02113 4e-08
INCMDMJA_02114 6.6e-56
INCMDMJA_02115 2.7e-57
INCMDMJA_02116 1.6e-11
INCMDMJA_02117 8.1e-126 S PAS domain
INCMDMJA_02118 6.3e-33 S Domain of unknown function (DUF4767)
INCMDMJA_02119 5.8e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
INCMDMJA_02120 2.5e-147 yitS S Uncharacterised protein, DegV family COG1307
INCMDMJA_02121 3.2e-101 3.6.1.27 I Acid phosphatase homologues
INCMDMJA_02122 1.4e-262 lmrB EGP Major facilitator Superfamily
INCMDMJA_02123 4.2e-77 K MerR HTH family regulatory protein
INCMDMJA_02124 3.1e-139 S Cysteine-rich secretory protein family
INCMDMJA_02125 9.7e-59 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
INCMDMJA_02126 1.1e-71 yslB S Protein of unknown function (DUF2507)
INCMDMJA_02127 6.6e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
INCMDMJA_02128 1.1e-110 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
INCMDMJA_02129 7.5e-231 pbuG S permease
INCMDMJA_02130 2.5e-119 K helix_turn_helix, mercury resistance
INCMDMJA_02131 3.3e-37
INCMDMJA_02132 9.6e-110 papP P ABC transporter, permease protein
INCMDMJA_02133 2e-110 P ABC transporter permease
INCMDMJA_02134 1.8e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
INCMDMJA_02135 3e-53 cjaA ET ABC transporter substrate-binding protein
INCMDMJA_02136 3.4e-126 1.3.5.4 C FAD binding domain
INCMDMJA_02137 1.7e-213 1.3.5.4 C FAD binding domain
INCMDMJA_02138 1.2e-49 L PFAM transposase, IS4 family protein
INCMDMJA_02139 5.7e-272 P Sodium:sulfate symporter transmembrane region
INCMDMJA_02140 1.3e-133 hxlA 6.2.1.3 H Aldolase/RraA
INCMDMJA_02141 2.5e-225 N Uncharacterized conserved protein (DUF2075)
INCMDMJA_02142 1.4e-69 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
INCMDMJA_02143 3.3e-261 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
INCMDMJA_02144 7.6e-91 F Nucleoside 2-deoxyribosyltransferase
INCMDMJA_02145 1e-30 S cog cog1373
INCMDMJA_02146 4e-60 L Resolvase, N terminal domain
INCMDMJA_02147 2.3e-25 dnaQ 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
INCMDMJA_02148 2.3e-101 L An automated process has identified a potential problem with this gene model
INCMDMJA_02149 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
INCMDMJA_02150 3.9e-72 hsp O Belongs to the small heat shock protein (HSP20) family
INCMDMJA_02151 1.4e-256 pepC 3.4.22.40 E aminopeptidase
INCMDMJA_02152 1.8e-195 S Bacterial protein of unknown function (DUF871)
INCMDMJA_02153 3.7e-130 ybbH_2 K rpiR family
INCMDMJA_02154 4.3e-37 UW LPXTG-motif cell wall anchor domain protein
INCMDMJA_02155 1e-78 S helix_turn_helix, Deoxyribose operon repressor
INCMDMJA_02156 3.3e-140 repB EP Plasmid replication protein
INCMDMJA_02157 2.2e-85 S PFAM Archaeal ATPase
INCMDMJA_02158 5.7e-84 S PFAM Archaeal ATPase
INCMDMJA_02159 7.7e-26
INCMDMJA_02160 6.5e-113 yncA 2.3.1.79 S Maltose acetyltransferase
INCMDMJA_02161 6.6e-61 psiE S Phosphate-starvation-inducible E
INCMDMJA_02163 4.4e-135 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
INCMDMJA_02164 8.3e-45 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
INCMDMJA_02165 1.2e-63 S SIR2-like domain
INCMDMJA_02167 2e-57 clcA P chloride
INCMDMJA_02168 3.9e-113 L PFAM Integrase catalytic
INCMDMJA_02169 0.0 pepO 3.4.24.71 O Peptidase family M13
INCMDMJA_02170 9.3e-35
INCMDMJA_02171 2e-157 S reductase
INCMDMJA_02172 5.8e-85 2.3.1.128 K Acetyltransferase (GNAT) domain
INCMDMJA_02173 2e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
INCMDMJA_02174 1.4e-104 engB D Necessary for normal cell division and for the maintenance of normal septation

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)