ORF_ID e_value Gene_name EC_number CAZy COGs Description
APFKJBBA_00001 1.4e-158 lysR5 K LysR substrate binding domain
APFKJBBA_00002 0.0 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
APFKJBBA_00003 3e-251 G Major Facilitator
APFKJBBA_00004 1.6e-96 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
APFKJBBA_00005 9.4e-191 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
APFKJBBA_00006 9.2e-286 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
APFKJBBA_00007 1.1e-278 yjeM E Amino Acid
APFKJBBA_00008 1.3e-96 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
APFKJBBA_00009 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
APFKJBBA_00010 9.3e-124 srtA 3.4.22.70 M sortase family
APFKJBBA_00011 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
APFKJBBA_00012 4.5e-171 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
APFKJBBA_00013 0.0 dnaK O Heat shock 70 kDa protein
APFKJBBA_00014 8.5e-78 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
APFKJBBA_00015 2.9e-193 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
APFKJBBA_00016 6.7e-121 S GyrI-like small molecule binding domain
APFKJBBA_00017 1.6e-282 lsa S ABC transporter
APFKJBBA_00018 7.6e-177 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
APFKJBBA_00019 1.4e-167 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
APFKJBBA_00020 7.9e-61 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
APFKJBBA_00021 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
APFKJBBA_00022 6e-46 rplGA J ribosomal protein
APFKJBBA_00023 2e-46 ylxR K Protein of unknown function (DUF448)
APFKJBBA_00024 3.3e-217 nusA K Participates in both transcription termination and antitermination
APFKJBBA_00025 4.7e-82 rimP J Required for maturation of 30S ribosomal subunits
APFKJBBA_00026 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
APFKJBBA_00027 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
APFKJBBA_00028 1.2e-230 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
APFKJBBA_00029 1.1e-136 cdsA 2.7.7.41 S Belongs to the CDS family
APFKJBBA_00030 5.5e-135 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
APFKJBBA_00031 3.4e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
APFKJBBA_00032 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
APFKJBBA_00033 1.7e-182 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
APFKJBBA_00034 2.8e-140 rpsB J Belongs to the universal ribosomal protein uS2 family
APFKJBBA_00035 3e-195 yabB 2.1.1.223 L Methyltransferase small domain
APFKJBBA_00036 9.8e-117 plsC 2.3.1.51 I Acyltransferase
APFKJBBA_00037 8.6e-201 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
APFKJBBA_00038 6.1e-300 mdlB V ABC transporter
APFKJBBA_00039 0.0 mdlA V ABC transporter
APFKJBBA_00040 1.5e-30 yneF S Uncharacterised protein family (UPF0154)
APFKJBBA_00041 1.5e-34 ynzC S UPF0291 protein
APFKJBBA_00042 7.9e-114 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
APFKJBBA_00043 1.1e-115 ung2 3.2.2.27 L Uracil-DNA glycosylase
APFKJBBA_00044 6.5e-75 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
APFKJBBA_00045 2.7e-117 lepB 3.4.21.89 U Belongs to the peptidase S26 family
APFKJBBA_00046 1e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
APFKJBBA_00047 2.2e-136 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
APFKJBBA_00048 7.4e-97 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
APFKJBBA_00049 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
APFKJBBA_00050 3.2e-227 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
APFKJBBA_00051 4.9e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
APFKJBBA_00052 1.6e-287 pipD E Dipeptidase
APFKJBBA_00053 7.8e-167 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
APFKJBBA_00054 0.0 smc D Required for chromosome condensation and partitioning
APFKJBBA_00055 1.6e-123 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
APFKJBBA_00056 0.0 oppA E ABC transporter substrate-binding protein
APFKJBBA_00057 2.8e-298 oppA E ABC transporter substrate-binding protein
APFKJBBA_00058 3.2e-30 oppA E ABC transporter substrate-binding protein
APFKJBBA_00059 2.1e-163 oppC P Binding-protein-dependent transport system inner membrane component
APFKJBBA_00060 7.5e-180 oppB P ABC transporter permease
APFKJBBA_00061 4.4e-180 oppF P Belongs to the ABC transporter superfamily
APFKJBBA_00062 1.1e-192 oppD P Belongs to the ABC transporter superfamily
APFKJBBA_00063 2.6e-36 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
APFKJBBA_00064 5.8e-183 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
APFKJBBA_00065 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
APFKJBBA_00066 9.6e-308 yloV S DAK2 domain fusion protein YloV
APFKJBBA_00067 1.4e-57 asp S Asp23 family, cell envelope-related function
APFKJBBA_00068 1.6e-25 rpmB J Belongs to the bacterial ribosomal protein bL28 family
APFKJBBA_00069 1e-122 thiN 2.7.6.2 H thiamine pyrophosphokinase
APFKJBBA_00070 3.1e-121 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
APFKJBBA_00071 1.4e-164 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
APFKJBBA_00072 0.0 KLT serine threonine protein kinase
APFKJBBA_00073 4.5e-140 stp 3.1.3.16 T phosphatase
APFKJBBA_00074 1.2e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
APFKJBBA_00075 7.1e-175 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
APFKJBBA_00076 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
APFKJBBA_00077 1.7e-31 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
APFKJBBA_00078 4.7e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
APFKJBBA_00079 4.6e-48
APFKJBBA_00080 1.7e-264 recN L May be involved in recombinational repair of damaged DNA
APFKJBBA_00081 3.7e-156 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
APFKJBBA_00082 2.3e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
APFKJBBA_00083 3.8e-35 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
APFKJBBA_00084 3.6e-252 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
APFKJBBA_00085 8.1e-154 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
APFKJBBA_00086 8e-67 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
APFKJBBA_00087 2.2e-73 yqhY S Asp23 family, cell envelope-related function
APFKJBBA_00088 8.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
APFKJBBA_00089 2.8e-194 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
APFKJBBA_00090 2.8e-48 rpmA J Belongs to the bacterial ribosomal protein bL27 family
APFKJBBA_00091 2e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
APFKJBBA_00092 7.3e-64 arsC 1.20.4.1 P Belongs to the ArsC family
APFKJBBA_00093 1.2e-149 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
APFKJBBA_00094 6.3e-246 S Uncharacterized protein conserved in bacteria (DUF2325)
APFKJBBA_00095 1.2e-12
APFKJBBA_00096 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
APFKJBBA_00097 1.2e-92 S ECF-type riboflavin transporter, S component
APFKJBBA_00098 1.7e-151 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
APFKJBBA_00099 1.4e-59
APFKJBBA_00100 5.2e-56 K Acetyltransferase (GNAT) domain
APFKJBBA_00101 4.7e-305 S Predicted membrane protein (DUF2207)
APFKJBBA_00102 1.2e-187 yhjX P Major Facilitator Superfamily
APFKJBBA_00103 6.9e-83 I Carboxylesterase family
APFKJBBA_00104 2.7e-63 I Carboxylesterase family
APFKJBBA_00105 7e-161 rhaS6 K helix_turn_helix, arabinose operon control protein
APFKJBBA_00106 2.1e-168 2.7.1.2 GK ROK family
APFKJBBA_00107 4.7e-257 pepC 3.4.22.40 E Peptidase C1-like family
APFKJBBA_00108 8.6e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
APFKJBBA_00109 0.0 oppA E ABC transporter substrate-binding protein
APFKJBBA_00110 1.2e-76 K MerR HTH family regulatory protein
APFKJBBA_00111 1.8e-265 lmrB EGP Major facilitator Superfamily
APFKJBBA_00112 7.1e-98 S Domain of unknown function (DUF4811)
APFKJBBA_00113 3.5e-128 pnb C nitroreductase
APFKJBBA_00114 2.6e-224 I transferase activity, transferring acyl groups other than amino-acyl groups
APFKJBBA_00115 2.1e-108 fic D Fic/DOC family
APFKJBBA_00116 6.6e-72
APFKJBBA_00117 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
APFKJBBA_00119 5.2e-122 S CAAX protease self-immunity
APFKJBBA_00120 2.5e-141 S haloacid dehalogenase-like hydrolase
APFKJBBA_00121 0.0 pepN 3.4.11.2 E aminopeptidase
APFKJBBA_00122 4.2e-50
APFKJBBA_00123 1e-19
APFKJBBA_00124 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
APFKJBBA_00125 1.6e-233 sptS 2.7.13.3 T Histidine kinase
APFKJBBA_00126 5.3e-116 K response regulator
APFKJBBA_00127 1.9e-112 2.7.6.5 T Region found in RelA / SpoT proteins
APFKJBBA_00128 8.3e-21 ltrA S Bacterial low temperature requirement A protein (LtrA)
APFKJBBA_00129 6.9e-66 O OsmC-like protein
APFKJBBA_00130 1.6e-288 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
APFKJBBA_00131 4.4e-180 E ABC transporter, ATP-binding protein
APFKJBBA_00132 2.3e-93 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
APFKJBBA_00133 1.6e-127 terC P Integral membrane protein TerC family
APFKJBBA_00134 1.5e-64 yeaO S Protein of unknown function, DUF488
APFKJBBA_00135 1.2e-106 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
APFKJBBA_00136 8.2e-280 glnP P ABC transporter permease
APFKJBBA_00137 9.6e-138 glnQ E ABC transporter, ATP-binding protein
APFKJBBA_00138 3.7e-162 L HNH nucleases
APFKJBBA_00139 4.5e-120 yfbR S HD containing hydrolase-like enzyme
APFKJBBA_00140 7.1e-214 G Glycosyl hydrolases family 8
APFKJBBA_00141 4.3e-247 ydaM M Glycosyl transferase
APFKJBBA_00143 1.7e-154
APFKJBBA_00144 1.7e-16
APFKJBBA_00145 1.3e-69 S Iron-sulphur cluster biosynthesis
APFKJBBA_00146 8.3e-183 ybiR P Citrate transporter
APFKJBBA_00147 9.9e-92 lemA S LemA family
APFKJBBA_00148 2e-147 htpX O Belongs to the peptidase M48B family
APFKJBBA_00149 2.3e-170 K helix_turn_helix, arabinose operon control protein
APFKJBBA_00150 4.8e-94 S ABC-type cobalt transport system, permease component
APFKJBBA_00151 4.3e-250 cbiO1 S ABC transporter, ATP-binding protein
APFKJBBA_00152 2.1e-109 P Cobalt transport protein
APFKJBBA_00153 9.5e-83 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
APFKJBBA_00154 3.5e-182 htrA 3.4.21.107 O serine protease
APFKJBBA_00155 3.3e-149 vicX 3.1.26.11 S domain protein
APFKJBBA_00156 1.4e-142 yycI S YycH protein
APFKJBBA_00157 3.5e-252 yycH S YycH protein
APFKJBBA_00158 0.0 vicK 2.7.13.3 T Histidine kinase
APFKJBBA_00159 1.2e-129 K response regulator
APFKJBBA_00162 3.6e-148 arbV 2.3.1.51 I Acyl-transferase
APFKJBBA_00163 3.2e-155 arbx M Glycosyl transferase family 8
APFKJBBA_00164 9.4e-183 arbY M Glycosyl transferase family 8
APFKJBBA_00165 2.5e-183 arbY M Glycosyl transferase family 8
APFKJBBA_00166 3.3e-163 arbZ I Phosphate acyltransferases
APFKJBBA_00167 4.6e-236 yhjX_2 P Major Facilitator Superfamily
APFKJBBA_00168 1.7e-249 yhjX_2 P Major Facilitator Superfamily
APFKJBBA_00169 2.4e-186 cbh 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
APFKJBBA_00170 3.2e-88 S Peptidase propeptide and YPEB domain
APFKJBBA_00171 3.9e-178 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
APFKJBBA_00172 2.5e-132 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
APFKJBBA_00173 4.4e-242 brnQ U Component of the transport system for branched-chain amino acids
APFKJBBA_00174 0.0 1.3.5.4 C FAD binding domain
APFKJBBA_00175 1.6e-171 K LysR substrate binding domain
APFKJBBA_00176 1.6e-266 E amino acid
APFKJBBA_00177 0.0 3.1.31.1 M domain protein
APFKJBBA_00178 0.0 infB UW LPXTG-motif cell wall anchor domain protein
APFKJBBA_00179 2.2e-179 K Transcriptional regulator
APFKJBBA_00180 2.8e-171 ppaC 3.6.1.1 C inorganic pyrophosphatase
APFKJBBA_00181 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
APFKJBBA_00182 7.7e-111 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
APFKJBBA_00183 7.2e-124 yoaK S Protein of unknown function (DUF1275)
APFKJBBA_00184 1.8e-203 xerS L Belongs to the 'phage' integrase family
APFKJBBA_00185 6.7e-167 K Transcriptional regulator
APFKJBBA_00186 3.7e-151
APFKJBBA_00187 3.8e-162 degV S EDD domain protein, DegV family
APFKJBBA_00188 3.8e-64
APFKJBBA_00189 0.0 FbpA K Fibronectin-binding protein
APFKJBBA_00190 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
APFKJBBA_00191 2.8e-196 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
APFKJBBA_00192 1.3e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
APFKJBBA_00193 2.3e-78 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
APFKJBBA_00194 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
APFKJBBA_00195 9.9e-58
APFKJBBA_00196 1e-47 degV S DegV family
APFKJBBA_00197 1.2e-88 degV S DegV family
APFKJBBA_00198 6.3e-240 cpdA S Calcineurin-like phosphoesterase
APFKJBBA_00199 2.4e-217 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
APFKJBBA_00200 2e-71 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
APFKJBBA_00201 4.2e-106 ypsA S Belongs to the UPF0398 family
APFKJBBA_00202 1.6e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
APFKJBBA_00203 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
APFKJBBA_00204 1.2e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
APFKJBBA_00205 6.7e-116 dnaD L DnaD domain protein
APFKJBBA_00206 2.9e-259 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
APFKJBBA_00207 4.8e-90 ypmB S Protein conserved in bacteria
APFKJBBA_00208 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
APFKJBBA_00209 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
APFKJBBA_00210 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
APFKJBBA_00211 4.4e-169 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
APFKJBBA_00212 4.3e-175 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
APFKJBBA_00213 4.1e-203 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
APFKJBBA_00214 5.2e-187 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
APFKJBBA_00215 1.6e-272 V ABC-type multidrug transport system, ATPase and permease components
APFKJBBA_00216 1.1e-289 V ABC-type multidrug transport system, ATPase and permease components
APFKJBBA_00217 1.6e-159 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
APFKJBBA_00218 6.1e-160 rbsU U ribose uptake protein RbsU
APFKJBBA_00219 3.9e-66 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
APFKJBBA_00220 3.1e-83 6.3.3.2 S ASCH
APFKJBBA_00221 3.7e-137 2.4.2.3 F Phosphorylase superfamily
APFKJBBA_00222 1.5e-88 2.3.1.57 K Acetyltransferase (GNAT) family
APFKJBBA_00223 1.4e-98 rimL J Acetyltransferase (GNAT) domain
APFKJBBA_00224 1.2e-100 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
APFKJBBA_00225 0.0 typA T GTP-binding protein TypA
APFKJBBA_00226 5.6e-209 ftsW D Belongs to the SEDS family
APFKJBBA_00227 6.1e-52 ylbG S UPF0298 protein
APFKJBBA_00228 1.6e-94 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
APFKJBBA_00229 1.5e-86 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
APFKJBBA_00230 2.5e-186 ylbL T Belongs to the peptidase S16 family
APFKJBBA_00231 2.4e-79 comEA L Competence protein ComEA
APFKJBBA_00232 0.0 comEC S Competence protein ComEC
APFKJBBA_00233 1.2e-177 holA 2.7.7.7 L DNA polymerase III delta subunit
APFKJBBA_00234 7.5e-34 rpsT J Binds directly to 16S ribosomal RNA
APFKJBBA_00235 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
APFKJBBA_00236 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
APFKJBBA_00237 7.7e-160
APFKJBBA_00238 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
APFKJBBA_00239 9.5e-205 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
APFKJBBA_00240 3.5e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
APFKJBBA_00241 2e-103 engB D Necessary for normal cell division and for the maintenance of normal septation
APFKJBBA_00242 6.7e-89 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
APFKJBBA_00243 1.5e-81
APFKJBBA_00244 1.2e-70 S Domain of unknown function (DUF4767)
APFKJBBA_00245 7.7e-225
APFKJBBA_00246 3.7e-161 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
APFKJBBA_00248 4.5e-76 S HIRAN
APFKJBBA_00250 7.2e-164 htpX O Peptidase family M48
APFKJBBA_00251 7e-32
APFKJBBA_00252 4e-223 patA 2.6.1.1 E Aminotransferase
APFKJBBA_00253 6.1e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
APFKJBBA_00254 4.8e-125 E GDSL-like Lipase/Acylhydrolase family
APFKJBBA_00255 1.5e-08 E GDSL-like Lipase/Acylhydrolase family
APFKJBBA_00256 1.4e-106 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
APFKJBBA_00257 1.3e-159 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
APFKJBBA_00258 1e-156 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
APFKJBBA_00259 1.5e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
APFKJBBA_00260 2e-47 yqeY S YqeY-like protein
APFKJBBA_00261 4.7e-174 phoH T phosphate starvation-inducible protein PhoH
APFKJBBA_00262 1.2e-91 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
APFKJBBA_00263 3.3e-169 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
APFKJBBA_00264 1.6e-137 recO L Involved in DNA repair and RecF pathway recombination
APFKJBBA_00265 3.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
APFKJBBA_00266 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
APFKJBBA_00267 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
APFKJBBA_00268 2.9e-199 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
APFKJBBA_00269 2.5e-121 trmK 2.1.1.217 S SAM-dependent methyltransferase
APFKJBBA_00270 3.2e-152 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
APFKJBBA_00271 1.2e-246 pepT 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
APFKJBBA_00272 9.6e-59 yvoA_1 K Transcriptional regulator, GntR family
APFKJBBA_00273 3.3e-124 skfE V ATPases associated with a variety of cellular activities
APFKJBBA_00274 2.1e-138
APFKJBBA_00275 2.3e-108
APFKJBBA_00276 8.1e-22
APFKJBBA_00277 1e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
APFKJBBA_00278 4e-133
APFKJBBA_00279 2.5e-167
APFKJBBA_00280 2e-229 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
APFKJBBA_00281 3.5e-52 ybjQ S Belongs to the UPF0145 family
APFKJBBA_00282 8.3e-161 XK27_05540 S DUF218 domain
APFKJBBA_00283 1.4e-87 yxeH S hydrolase
APFKJBBA_00284 2.5e-52 yxeH S hydrolase
APFKJBBA_00285 1.8e-110 yihX 3.1.3.10, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
APFKJBBA_00286 3.9e-113 3.6.1.55 F NUDIX domain
APFKJBBA_00287 5.8e-63 S Putative adhesin
APFKJBBA_00288 4.6e-247 brnQ U Component of the transport system for branched-chain amino acids
APFKJBBA_00289 1.4e-11 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
APFKJBBA_00290 2.7e-32 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
APFKJBBA_00291 4.5e-17 L Plasmid pRiA4b ORF-3-like protein
APFKJBBA_00292 5.2e-68 K HxlR family
APFKJBBA_00293 2.7e-48
APFKJBBA_00294 5.1e-231 4.2.1.6, 5.1.2.2 M Mandelate racemase muconate lactonizing enzyme
APFKJBBA_00295 2.5e-11 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
APFKJBBA_00296 1.9e-75 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
APFKJBBA_00297 3.2e-292 P ABC transporter
APFKJBBA_00298 8.6e-290 V ABC-type multidrug transport system, ATPase and permease components
APFKJBBA_00299 1.2e-41 yphH S Cupin domain
APFKJBBA_00300 1.4e-189 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
APFKJBBA_00301 4.4e-35 uidA 3.2.1.31 G Belongs to the glycosyl hydrolase 2 family
APFKJBBA_00302 1.7e-32 mta K helix_turn_helix, mercury resistance
APFKJBBA_00303 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
APFKJBBA_00304 3.9e-126 lmrA 3.6.3.44 V ABC transporter
APFKJBBA_00305 4.9e-156 C Aldo keto reductase
APFKJBBA_00307 9.2e-101 K Transcriptional regulator C-terminal region
APFKJBBA_00308 1.7e-231 E Alpha/beta hydrolase of unknown function (DUF1100)
APFKJBBA_00309 2.1e-117 GM NAD(P)H-binding
APFKJBBA_00310 7.2e-88 mdt(A) EGP Major facilitator Superfamily
APFKJBBA_00311 1.2e-89 mdt(A) EGP Major facilitator Superfamily
APFKJBBA_00312 4.9e-61 S Sulfite exporter TauE/SafE
APFKJBBA_00313 1.9e-32 G Major facilitator Superfamily
APFKJBBA_00314 4.1e-264 npr 1.11.1.1 C NADH oxidase
APFKJBBA_00315 2.3e-63 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
APFKJBBA_00316 4.1e-30 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
APFKJBBA_00317 1.3e-70 yobV1 K WYL domain
APFKJBBA_00318 3.1e-77 yobV1 K WYL domain
APFKJBBA_00319 2.4e-68 S pyridoxamine 5-phosphate
APFKJBBA_00320 1.3e-21 cylB V ABC-2 type transporter
APFKJBBA_00321 5.5e-50 K LytTr DNA-binding domain
APFKJBBA_00322 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
APFKJBBA_00323 4.6e-35 copZ C Heavy-metal-associated domain
APFKJBBA_00324 3.1e-93 dps P Belongs to the Dps family
APFKJBBA_00325 1.5e-112 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
APFKJBBA_00326 4e-95 K Acetyltransferase (GNAT) family
APFKJBBA_00327 6.9e-80 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
APFKJBBA_00328 5.2e-08 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
APFKJBBA_00329 6.2e-76 K Transcriptional regulator
APFKJBBA_00330 7.9e-69 ogt 2.1.1.63 L methylated-DNA-[protein]-cysteine S-methyltransferase activity
APFKJBBA_00331 2.5e-86 XK27_09675 K Acetyltransferase (GNAT) domain
APFKJBBA_00332 1.3e-53 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
APFKJBBA_00333 7.3e-58 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
APFKJBBA_00334 5.7e-244 yrvN L AAA C-terminal domain
APFKJBBA_00335 1.5e-33 4.1.1.45 S Amidohydrolase
APFKJBBA_00336 2.3e-105 4.1.1.45 S Amidohydrolase
APFKJBBA_00337 9e-122 ybhL S Belongs to the BI1 family
APFKJBBA_00338 2.9e-14 C Aldo/keto reductase family
APFKJBBA_00339 1.9e-54 C Aldo/keto reductase family
APFKJBBA_00340 3.3e-166 akr5f 1.1.1.346 S reductase
APFKJBBA_00341 1.8e-124 magIII L Base excision DNA repair protein, HhH-GPD family
APFKJBBA_00342 2.6e-109 lacA 2.3.1.79 S Transferase hexapeptide repeat
APFKJBBA_00343 8.9e-116 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
APFKJBBA_00344 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
APFKJBBA_00345 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
APFKJBBA_00346 1.1e-36 comGC U Required for transformation and DNA binding
APFKJBBA_00347 4.7e-177 comGB NU type II secretion system
APFKJBBA_00348 5.8e-180 comGA NU Type II IV secretion system protein
APFKJBBA_00349 1.5e-132 yebC K Transcriptional regulatory protein
APFKJBBA_00350 7.3e-97 S VanZ like family
APFKJBBA_00351 4.3e-217 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
APFKJBBA_00352 4.5e-163 znuA P Belongs to the bacterial solute-binding protein 9 family
APFKJBBA_00353 8.5e-150 yisY 1.11.1.10 S Alpha/beta hydrolase family
APFKJBBA_00354 4.8e-115
APFKJBBA_00355 8e-179 S Putative adhesin
APFKJBBA_00356 5.3e-62 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
APFKJBBA_00357 8.6e-66 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
APFKJBBA_00358 4.4e-149 S Sucrose-6F-phosphate phosphohydrolase
APFKJBBA_00359 2.5e-253 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
APFKJBBA_00360 8.1e-174 ybbR S YbbR-like protein
APFKJBBA_00361 3.4e-152 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
APFKJBBA_00362 1.3e-209 potD P ABC transporter
APFKJBBA_00363 8.5e-137 potC P ABC transporter permease
APFKJBBA_00364 2.7e-130 potB P ABC transporter permease
APFKJBBA_00365 5.9e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
APFKJBBA_00366 4.4e-166 murB 1.3.1.98 M Cell wall formation
APFKJBBA_00367 1e-98 dnaQ 2.7.7.7 L DNA polymerase III
APFKJBBA_00368 1.3e-84 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
APFKJBBA_00369 2.5e-178 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
APFKJBBA_00370 3.1e-135 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
APFKJBBA_00371 8e-157 ycsE S Sucrose-6F-phosphate phosphohydrolase
APFKJBBA_00372 2.9e-93
APFKJBBA_00373 6.6e-91
APFKJBBA_00375 1e-107 3.2.2.20 K acetyltransferase
APFKJBBA_00376 2.3e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
APFKJBBA_00377 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
APFKJBBA_00378 2.5e-28 secG U Preprotein translocase
APFKJBBA_00379 1.2e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
APFKJBBA_00380 1.9e-141 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
APFKJBBA_00381 1.3e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
APFKJBBA_00382 1.6e-188 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
APFKJBBA_00383 2.3e-187 cggR K Putative sugar-binding domain
APFKJBBA_00385 1.2e-277 ycaM E amino acid
APFKJBBA_00386 2.1e-100 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
APFKJBBA_00387 6.2e-171 whiA K May be required for sporulation
APFKJBBA_00388 4.9e-193 ybhK S Required for morphogenesis under gluconeogenic growth conditions
APFKJBBA_00389 6e-160 rapZ S Displays ATPase and GTPase activities
APFKJBBA_00390 1.1e-90 S Short repeat of unknown function (DUF308)
APFKJBBA_00391 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
APFKJBBA_00392 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
APFKJBBA_00393 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
APFKJBBA_00394 1.6e-193 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
APFKJBBA_00395 5.2e-289 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
APFKJBBA_00396 1.4e-225 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
APFKJBBA_00397 9.2e-181 lacR K Transcriptional regulator
APFKJBBA_00399 1.3e-99
APFKJBBA_00400 1.3e-28
APFKJBBA_00401 2.1e-63
APFKJBBA_00402 1.6e-48 S MazG-like family
APFKJBBA_00403 1.9e-152 S Protein of unknown function (DUF2785)
APFKJBBA_00404 1.2e-22 K Acetyltransferase (GNAT) domain
APFKJBBA_00405 4.5e-36 K Acetyltransferase (GNAT) domain
APFKJBBA_00406 1.1e-48
APFKJBBA_00407 5e-282 V ABC transporter transmembrane region
APFKJBBA_00408 1.7e-84 C nitroreductase
APFKJBBA_00409 2e-294 V ABC-type multidrug transport system, ATPase and permease components
APFKJBBA_00410 2e-149 ropB K Helix-turn-helix domain
APFKJBBA_00411 1e-127 qmcA O prohibitin homologues
APFKJBBA_00412 1.2e-141 S Protein of unknown function (DUF975)
APFKJBBA_00413 1.3e-54 K sequence-specific DNA binding
APFKJBBA_00414 1e-09 K sequence-specific DNA binding
APFKJBBA_00415 2e-105 speG J Acetyltransferase (GNAT) domain
APFKJBBA_00416 2.2e-139
APFKJBBA_00417 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
APFKJBBA_00418 2e-42 rpiB 5.3.1.26, 5.3.1.6 G Ribose/Galactose Isomerase
APFKJBBA_00419 8.4e-50
APFKJBBA_00420 2.8e-28
APFKJBBA_00421 8.4e-119 drgA C nitroreductase
APFKJBBA_00422 0.0 1.3.5.4 C FMN_bind
APFKJBBA_00423 4.2e-161 lysR7 K LysR substrate binding domain
APFKJBBA_00424 3.3e-158 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
APFKJBBA_00425 5.3e-231 hom1 1.1.1.3 E homoserine dehydrogenase
APFKJBBA_00426 3.3e-283 thrC 4.2.3.1 E Threonine synthase
APFKJBBA_00427 5.7e-197 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
APFKJBBA_00428 4.8e-257 lysC 2.7.2.4 E Belongs to the aspartokinase family
APFKJBBA_00429 0.0 pepO 3.4.24.71 O Peptidase family M13
APFKJBBA_00430 0.0 XK27_06780 V ABC transporter permease
APFKJBBA_00431 2.9e-128 XK27_06785 V ABC transporter, ATP-binding protein
APFKJBBA_00432 5.7e-126 alkD L DNA alkylation repair enzyme
APFKJBBA_00433 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
APFKJBBA_00434 3.6e-27 pncA Q Isochorismatase family
APFKJBBA_00435 1.9e-65 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
APFKJBBA_00436 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
APFKJBBA_00437 1.2e-210 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
APFKJBBA_00438 3.1e-242 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
APFKJBBA_00439 4.1e-181 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
APFKJBBA_00440 2.1e-94 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
APFKJBBA_00441 6.8e-170 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
APFKJBBA_00442 1.4e-127 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
APFKJBBA_00443 5.4e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
APFKJBBA_00444 1.1e-298 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
APFKJBBA_00445 7.8e-216 iscS2 2.8.1.7 E Aminotransferase class V
APFKJBBA_00446 5e-229 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
APFKJBBA_00447 2.9e-125 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
APFKJBBA_00448 4.2e-211 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
APFKJBBA_00449 5.8e-55 3.6.3.8 P P-type ATPase
APFKJBBA_00450 0.0 3.6.3.8 P P-type ATPase
APFKJBBA_00451 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
APFKJBBA_00452 2.8e-235 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
APFKJBBA_00453 9.2e-124 S Haloacid dehalogenase-like hydrolase
APFKJBBA_00454 3.6e-111 radC L DNA repair protein
APFKJBBA_00455 6.4e-166 mreB D cell shape determining protein MreB
APFKJBBA_00456 1e-143 mreC M Involved in formation and maintenance of cell shape
APFKJBBA_00457 5.4e-95 mreD
APFKJBBA_00458 3.6e-13 S Protein of unknown function (DUF4044)
APFKJBBA_00459 3.9e-51 S Protein of unknown function (DUF3397)
APFKJBBA_00460 4.1e-77 mraZ K Belongs to the MraZ family
APFKJBBA_00461 1.3e-176 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
APFKJBBA_00462 6.3e-55 ftsL D Cell division protein FtsL
APFKJBBA_00463 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
APFKJBBA_00464 1.6e-177 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
APFKJBBA_00465 2.5e-261 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
APFKJBBA_00466 1.2e-210 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
APFKJBBA_00467 6.3e-154 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
APFKJBBA_00468 4.1e-240 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
APFKJBBA_00469 3.7e-233 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
APFKJBBA_00470 3.6e-73 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
APFKJBBA_00471 2e-27 yggT S YGGT family
APFKJBBA_00472 4.8e-148 ylmH S S4 domain protein
APFKJBBA_00473 2.1e-119 gpsB D DivIVA domain protein
APFKJBBA_00474 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
APFKJBBA_00475 2e-32 cspA K 'Cold-shock' DNA-binding domain
APFKJBBA_00476 9.7e-103 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
APFKJBBA_00478 1.6e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
APFKJBBA_00479 3.3e-214 iscS 2.8.1.7 E Aminotransferase class V
APFKJBBA_00480 1.6e-57 XK27_04120 S Putative amino acid metabolism
APFKJBBA_00481 2.3e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
APFKJBBA_00482 2e-123 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
APFKJBBA_00483 5.1e-116 S Repeat protein
APFKJBBA_00484 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
APFKJBBA_00485 9.9e-177 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
APFKJBBA_00486 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
APFKJBBA_00487 3e-34 ykzG S Belongs to the UPF0356 family
APFKJBBA_00488 0.0 hsdR 3.1.21.3 V EcoEI R protein C-terminal
APFKJBBA_00489 1.3e-209 3.1.21.3 V Type I restriction modification DNA specificity domain
APFKJBBA_00490 2.4e-178 L Belongs to the 'phage' integrase family
APFKJBBA_00491 1.6e-224 3.1.21.3 V Type I restriction modification DNA specificity domain
APFKJBBA_00492 1.8e-292 hsdM 2.1.1.72 V type I restriction-modification system
APFKJBBA_00493 2.6e-134
APFKJBBA_00494 0.0 KL domain protein
APFKJBBA_00495 1.1e-231 S Tetratricopeptide repeat protein
APFKJBBA_00496 2e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
APFKJBBA_00497 9.4e-242 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
APFKJBBA_00498 2.3e-218 rpsA 1.17.7.4 J Ribosomal protein S1
APFKJBBA_00499 2e-115 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
APFKJBBA_00500 4.4e-98 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
APFKJBBA_00501 1.9e-58 M Lysin motif
APFKJBBA_00502 1.8e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
APFKJBBA_00503 2.9e-105 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
APFKJBBA_00504 1.1e-135 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
APFKJBBA_00505 3.2e-62 ribT K acetyltransferase
APFKJBBA_00506 2.5e-169 xerD D recombinase XerD
APFKJBBA_00507 1.5e-166 cvfB S S1 domain
APFKJBBA_00508 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
APFKJBBA_00509 2.7e-182 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
APFKJBBA_00511 0.0 dnaE 2.7.7.7 L DNA polymerase
APFKJBBA_00512 2.1e-28 S Protein of unknown function (DUF2929)
APFKJBBA_00513 8.1e-309 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
APFKJBBA_00514 1.3e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
APFKJBBA_00515 7.5e-47 yrvD S Lipopolysaccharide assembly protein A domain
APFKJBBA_00516 9.3e-144 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
APFKJBBA_00517 1.4e-178 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
APFKJBBA_00518 0.0 oatA I Acyltransferase
APFKJBBA_00519 3.9e-240 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
APFKJBBA_00520 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
APFKJBBA_00521 1.8e-175 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
APFKJBBA_00522 2.8e-87 dedA 3.1.3.1 S SNARE associated Golgi protein
APFKJBBA_00523 1.5e-115 GM NmrA-like family
APFKJBBA_00524 7.7e-247 yagE E amino acid
APFKJBBA_00525 3.1e-77 S Rib/alpha-like repeat
APFKJBBA_00526 4.6e-64 S Domain of unknown function DUF1828
APFKJBBA_00527 7.2e-68
APFKJBBA_00528 1.3e-18 S PD-(D/E)XK nuclease family transposase
APFKJBBA_00529 9.3e-68 2.7.1.191 G PTS system fructose IIA component
APFKJBBA_00530 5.5e-147 manZ_1 G PTS system mannose/fructose/sorbose family IID component
APFKJBBA_00531 2.9e-141 XK27_08455 G PTS system sorbose-specific iic component
APFKJBBA_00532 3.3e-83 2.7.1.191 G PTS system sorbose subfamily IIB component
APFKJBBA_00533 1.8e-228 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
APFKJBBA_00534 2.4e-217 agaS G SIS domain
APFKJBBA_00535 5.3e-130 XK27_08435 K UTRA
APFKJBBA_00536 0.0 G Belongs to the glycosyl hydrolase 31 family
APFKJBBA_00537 7.6e-157 I alpha/beta hydrolase fold
APFKJBBA_00538 4.9e-118 yibF S overlaps another CDS with the same product name
APFKJBBA_00539 1.4e-187 yibE S overlaps another CDS with the same product name
APFKJBBA_00540 1.3e-141 yjcE P Sodium proton antiporter
APFKJBBA_00541 6.5e-117 yjcE P Sodium proton antiporter
APFKJBBA_00542 3.3e-95
APFKJBBA_00543 2.8e-207 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
APFKJBBA_00544 7.2e-286 S Cysteine-rich secretory protein family
APFKJBBA_00545 1.1e-139
APFKJBBA_00546 6.4e-114 luxT K Bacterial regulatory proteins, tetR family
APFKJBBA_00547 2.8e-241 cycA E Amino acid permease
APFKJBBA_00548 2.4e-220 S CAAX protease self-immunity
APFKJBBA_00549 4.1e-181 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
APFKJBBA_00550 1.4e-62
APFKJBBA_00551 6.9e-124 S Alpha/beta hydrolase family
APFKJBBA_00552 2.2e-143 2.4.1.293 GT2 M Glycosyltransferase like family 2
APFKJBBA_00553 2.4e-162 ypuA S Protein of unknown function (DUF1002)
APFKJBBA_00554 6.2e-145 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
APFKJBBA_00555 6.3e-176 S Alpha/beta hydrolase of unknown function (DUF915)
APFKJBBA_00556 1.8e-122 yugP S Putative neutral zinc metallopeptidase
APFKJBBA_00557 6.4e-273 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
APFKJBBA_00558 6.7e-81
APFKJBBA_00559 4.6e-134 cobB K SIR2 family
APFKJBBA_00560 2.8e-243 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
APFKJBBA_00562 3.7e-262 pepC 3.4.22.40 E aminopeptidase
APFKJBBA_00563 7.5e-123 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
APFKJBBA_00564 8.4e-173 pepC 3.4.22.40 E aminopeptidase
APFKJBBA_00565 8.1e-76 pepC 3.4.22.40 E aminopeptidase
APFKJBBA_00566 7.7e-43
APFKJBBA_00567 8.8e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
APFKJBBA_00568 2.1e-76 hsp O Belongs to the small heat shock protein (HSP20) family
APFKJBBA_00569 7.6e-293 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
APFKJBBA_00570 3.7e-82
APFKJBBA_00571 1.4e-248 celD 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
APFKJBBA_00572 4e-41 yydK K UTRA
APFKJBBA_00573 1.2e-42 yydK K UTRA
APFKJBBA_00574 1.4e-166 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
APFKJBBA_00575 4.7e-116 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
APFKJBBA_00576 3.4e-132 gmuR K UTRA
APFKJBBA_00577 8.5e-51 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
APFKJBBA_00578 1.3e-38
APFKJBBA_00579 3.4e-52 ptcB 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
APFKJBBA_00580 2.9e-268 pts23C 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
APFKJBBA_00581 4.4e-282 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
APFKJBBA_00582 5.2e-156 ypbG 2.7.1.2 GK ROK family
APFKJBBA_00583 1.1e-113
APFKJBBA_00585 8.6e-113 E Belongs to the SOS response-associated peptidase family
APFKJBBA_00586 5.7e-194 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
APFKJBBA_00587 4.3e-91 comEB 3.5.4.12 F MafB19-like deaminase
APFKJBBA_00588 5.2e-99 S TPM domain
APFKJBBA_00589 3e-91 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
APFKJBBA_00590 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
APFKJBBA_00591 2e-146 tatD L hydrolase, TatD family
APFKJBBA_00592 1.9e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
APFKJBBA_00593 1.2e-158 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
APFKJBBA_00594 7.4e-36 veg S Biofilm formation stimulator VEG
APFKJBBA_00595 2.6e-152 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
APFKJBBA_00596 6.9e-219 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
APFKJBBA_00597 4.8e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
APFKJBBA_00598 2.2e-176 yvdE K helix_turn _helix lactose operon repressor
APFKJBBA_00599 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
APFKJBBA_00600 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
APFKJBBA_00601 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
APFKJBBA_00602 2.4e-113 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
APFKJBBA_00603 3.6e-210 msmX P Belongs to the ABC transporter superfamily
APFKJBBA_00604 5e-229 malE G Bacterial extracellular solute-binding protein
APFKJBBA_00605 6.5e-254 malF P Binding-protein-dependent transport system inner membrane component
APFKJBBA_00606 9.7e-155 malG P ABC transporter permease
APFKJBBA_00607 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
APFKJBBA_00608 3.3e-266 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
APFKJBBA_00609 6e-73 S Domain of unknown function (DUF1934)
APFKJBBA_00610 2.9e-64 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
APFKJBBA_00611 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
APFKJBBA_00612 2.2e-240 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
APFKJBBA_00613 6e-236 pbuX F xanthine permease
APFKJBBA_00614 5.3e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
APFKJBBA_00615 6.6e-134 K DNA-binding helix-turn-helix protein
APFKJBBA_00616 1.6e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
APFKJBBA_00618 1.2e-132 K Helix-turn-helix
APFKJBBA_00619 4.1e-37
APFKJBBA_00620 2.4e-66 doc S Fic/DOC family
APFKJBBA_00621 6.5e-93 K Bacterial regulatory proteins, tetR family
APFKJBBA_00622 1.8e-112 1.6.5.2 S Flavodoxin-like fold
APFKJBBA_00623 5.7e-44 yjdF S Protein of unknown function (DUF2992)
APFKJBBA_00625 7.9e-51
APFKJBBA_00626 2.1e-50 S Domain of unknown function (DUF4160)
APFKJBBA_00627 3.1e-58 yjdF S Protein of unknown function (DUF2992)
APFKJBBA_00628 3.9e-98 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
APFKJBBA_00629 1.3e-93
APFKJBBA_00630 1.8e-272 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
APFKJBBA_00631 2.3e-278 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
APFKJBBA_00632 2.6e-43 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
APFKJBBA_00633 8.6e-186 yfdV S Membrane transport protein
APFKJBBA_00634 7.1e-40
APFKJBBA_00635 2.4e-22 eno2 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
APFKJBBA_00636 3.6e-78 eno2 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
APFKJBBA_00637 5e-79 eno2 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
APFKJBBA_00638 4.9e-67 S Putative adhesin
APFKJBBA_00639 6e-79
APFKJBBA_00640 9.3e-08
APFKJBBA_00641 6.3e-63 pipD E Dipeptidase
APFKJBBA_00642 6.3e-122 pipD E Dipeptidase
APFKJBBA_00643 2e-230 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
APFKJBBA_00644 0.0 rafA 3.2.1.22 G alpha-galactosidase
APFKJBBA_00645 1e-187 ABC-SBP S ABC transporter
APFKJBBA_00646 4.9e-141 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
APFKJBBA_00647 3.4e-135 XK27_08845 S ABC transporter, ATP-binding protein
APFKJBBA_00648 3.2e-284 ybeC E amino acid
APFKJBBA_00649 8e-41 rpmE2 J Ribosomal protein L31
APFKJBBA_00650 2.9e-262 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
APFKJBBA_00651 7.7e-261 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
APFKJBBA_00652 5.9e-61 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
APFKJBBA_00653 1.1e-217 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
APFKJBBA_00654 2.4e-124 S (CBS) domain
APFKJBBA_00655 8.1e-182 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
APFKJBBA_00656 3.9e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
APFKJBBA_00657 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
APFKJBBA_00658 1.8e-34 yabO J S4 domain protein
APFKJBBA_00659 2.3e-60 divIC D Septum formation initiator
APFKJBBA_00660 9.9e-61 yabR J S1 RNA binding domain
APFKJBBA_00661 2.4e-250 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
APFKJBBA_00662 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
APFKJBBA_00663 0.0 S membrane
APFKJBBA_00664 4.9e-162 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
APFKJBBA_00665 8.9e-192 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
APFKJBBA_00666 2.7e-296 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
APFKJBBA_00667 1e-76 M Protein of unknown function (DUF3737)
APFKJBBA_00668 1.8e-80 patB 4.4.1.8 E Aminotransferase, class I
APFKJBBA_00669 2.9e-192 manA 5.3.1.8 G mannose-6-phosphate isomerase
APFKJBBA_00670 9.2e-68 S SdpI/YhfL protein family
APFKJBBA_00671 9e-130 K Transcriptional regulatory protein, C terminal
APFKJBBA_00672 5.3e-270 T PhoQ Sensor
APFKJBBA_00673 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
APFKJBBA_00674 1.4e-107 vanZ V VanZ like family
APFKJBBA_00675 1.6e-260 pgi 5.3.1.9 G Belongs to the GPI family
APFKJBBA_00676 6.8e-206 EGP Major facilitator Superfamily
APFKJBBA_00677 1.4e-72
APFKJBBA_00680 7.2e-197 ampC V Beta-lactamase
APFKJBBA_00681 4.9e-262 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain
APFKJBBA_00682 5.5e-112 tdk 2.7.1.21 F thymidine kinase
APFKJBBA_00683 1e-196 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
APFKJBBA_00684 3e-156 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
APFKJBBA_00685 1.2e-188 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
APFKJBBA_00686 1.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
APFKJBBA_00687 1.6e-126 atpB C it plays a direct role in the translocation of protons across the membrane
APFKJBBA_00688 2.1e-26 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
APFKJBBA_00689 5.9e-51 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
APFKJBBA_00690 5.7e-92 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
APFKJBBA_00691 5.1e-284 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
APFKJBBA_00692 2.7e-169 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
APFKJBBA_00693 4.3e-248 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
APFKJBBA_00694 1.1e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
APFKJBBA_00695 2e-30 ywzB S Protein of unknown function (DUF1146)
APFKJBBA_00696 2.2e-179 mbl D Cell shape determining protein MreB Mrl
APFKJBBA_00697 2.5e-15 S DNA-directed RNA polymerase subunit beta
APFKJBBA_00698 2e-51 yidD S Could be involved in insertion of integral membrane proteins into the membrane
APFKJBBA_00699 1.3e-34 S Protein of unknown function (DUF2969)
APFKJBBA_00700 1.5e-222 rodA D Belongs to the SEDS family
APFKJBBA_00701 5.2e-81 usp6 T universal stress protein
APFKJBBA_00703 7.4e-239 rarA L recombination factor protein RarA
APFKJBBA_00704 1e-81 yueI S Protein of unknown function (DUF1694)
APFKJBBA_00705 1e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
APFKJBBA_00707 4.6e-35
APFKJBBA_00708 1.5e-82 mutT 3.6.1.55 F NUDIX domain
APFKJBBA_00709 3.1e-73
APFKJBBA_00710 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
APFKJBBA_00711 1.2e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
APFKJBBA_00712 7.3e-74 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
APFKJBBA_00713 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
APFKJBBA_00714 1.4e-65
APFKJBBA_00715 4.6e-174 prmA J Ribosomal protein L11 methyltransferase
APFKJBBA_00716 3e-87 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
APFKJBBA_00717 0.0 S Bacterial membrane protein, YfhO
APFKJBBA_00718 0.0 aha1 P E1-E2 ATPase
APFKJBBA_00719 2.5e-189 ansA 3.5.1.1 EJ L-asparaginase, type I
APFKJBBA_00720 2.9e-257 yjjP S Putative threonine/serine exporter
APFKJBBA_00721 2.6e-169 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
APFKJBBA_00722 2.1e-260 frdC 1.3.5.4 C FAD binding domain
APFKJBBA_00723 3.8e-265 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
APFKJBBA_00724 2.8e-67 metI P ABC transporter permease
APFKJBBA_00725 8.2e-188 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
APFKJBBA_00726 1.8e-156 metQ1 P Belongs to the nlpA lipoprotein family
APFKJBBA_00727 7.6e-60 L nuclease
APFKJBBA_00728 2.8e-146 F DNA/RNA non-specific endonuclease
APFKJBBA_00729 2.7e-41 K Helix-turn-helix domain
APFKJBBA_00730 1.1e-310 ybiT S ABC transporter, ATP-binding protein
APFKJBBA_00731 3.7e-18 S Sugar efflux transporter for intercellular exchange
APFKJBBA_00732 8.9e-245 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
APFKJBBA_00733 2.2e-102 3.6.1.27 I Acid phosphatase homologues
APFKJBBA_00735 3.5e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
APFKJBBA_00736 1e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
APFKJBBA_00737 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
APFKJBBA_00738 5.8e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
APFKJBBA_00739 2.2e-111 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
APFKJBBA_00740 2.3e-105 rplD J Forms part of the polypeptide exit tunnel
APFKJBBA_00741 2.2e-45 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
APFKJBBA_00742 5.6e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
APFKJBBA_00743 5e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
APFKJBBA_00744 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
APFKJBBA_00745 3.6e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
APFKJBBA_00746 6.6e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
APFKJBBA_00747 2.2e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
APFKJBBA_00748 7.7e-42 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
APFKJBBA_00749 5.6e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
APFKJBBA_00750 1.4e-34 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
APFKJBBA_00751 4.2e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
APFKJBBA_00752 2.3e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
APFKJBBA_00753 2.7e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
APFKJBBA_00754 5e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
APFKJBBA_00755 1.9e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
APFKJBBA_00756 1.9e-76 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
APFKJBBA_00757 1.4e-23 rpmD J Ribosomal protein L30
APFKJBBA_00758 1.3e-70 rplO J Binds to the 23S rRNA
APFKJBBA_00759 1.3e-235 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
APFKJBBA_00760 2.7e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
APFKJBBA_00761 1.4e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
APFKJBBA_00762 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
APFKJBBA_00763 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
APFKJBBA_00764 2.6e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
APFKJBBA_00765 1.3e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
APFKJBBA_00766 1.3e-61 rplQ J Ribosomal protein L17
APFKJBBA_00767 5.1e-156 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
APFKJBBA_00768 2.2e-162 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
APFKJBBA_00769 1.1e-139 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
APFKJBBA_00770 4.2e-152 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
APFKJBBA_00771 4.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
APFKJBBA_00772 1.5e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
APFKJBBA_00773 1.2e-79
APFKJBBA_00774 1.2e-160 1.6.5.2 GM NmrA-like family
APFKJBBA_00775 3.8e-110 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
APFKJBBA_00776 1.3e-128 pgm3 G Belongs to the phosphoglycerate mutase family
APFKJBBA_00777 2.6e-52 K Transcriptional regulator, ArsR family
APFKJBBA_00778 3.4e-155 czcD P cation diffusion facilitator family transporter
APFKJBBA_00779 2e-42
APFKJBBA_00780 5.4e-26
APFKJBBA_00781 1.4e-127 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
APFKJBBA_00782 1.4e-216 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
APFKJBBA_00783 1.1e-101 J Acetyltransferase (GNAT) domain
APFKJBBA_00784 1.5e-106 yjbF S SNARE associated Golgi protein
APFKJBBA_00785 3.5e-151 I alpha/beta hydrolase fold
APFKJBBA_00786 5.8e-144 hipB K Helix-turn-helix
APFKJBBA_00787 7.2e-261 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
APFKJBBA_00788 6e-180
APFKJBBA_00789 2.1e-123 S SNARE associated Golgi protein
APFKJBBA_00790 3.4e-133 cof S haloacid dehalogenase-like hydrolase
APFKJBBA_00791 0.0 ydgH S MMPL family
APFKJBBA_00792 3e-90 yobS K Bacterial regulatory proteins, tetR family
APFKJBBA_00793 1.4e-167 3.5.2.6 V Beta-lactamase enzyme family
APFKJBBA_00794 5.4e-167 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
APFKJBBA_00795 1.4e-80 yjcF S Acetyltransferase (GNAT) domain
APFKJBBA_00796 6.6e-96 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
APFKJBBA_00797 1.1e-77 yybA 2.3.1.57 K Transcriptional regulator
APFKJBBA_00798 8.7e-52 ypaA S Protein of unknown function (DUF1304)
APFKJBBA_00799 3e-240 G Bacterial extracellular solute-binding protein
APFKJBBA_00800 7.9e-257 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
APFKJBBA_00801 5e-148 gtsC P Binding-protein-dependent transport system inner membrane component
APFKJBBA_00802 9.5e-158 gtsB P ABC-type sugar transport systems, permease components
APFKJBBA_00803 7.1e-203 malK P ATPases associated with a variety of cellular activities
APFKJBBA_00804 4.3e-280 pipD E Dipeptidase
APFKJBBA_00805 2.2e-122 endA F DNA RNA non-specific endonuclease
APFKJBBA_00806 2.9e-148 dkg S reductase
APFKJBBA_00807 1.8e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
APFKJBBA_00808 9.1e-12 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
APFKJBBA_00809 2e-100 nusG K Participates in transcription elongation, termination and antitermination
APFKJBBA_00810 5.3e-69 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
APFKJBBA_00811 1.6e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
APFKJBBA_00812 4.6e-109 glnP P ABC transporter permease
APFKJBBA_00813 8.8e-116 glnQ 3.6.3.21 E ABC transporter
APFKJBBA_00814 6.2e-148 aatB ET ABC transporter substrate-binding protein
APFKJBBA_00815 3.1e-96 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
APFKJBBA_00816 9.4e-51 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
APFKJBBA_00817 1.8e-148 kcsA P Ion transport protein
APFKJBBA_00818 1.6e-32
APFKJBBA_00819 3.9e-113 rsmC 2.1.1.172 J Methyltransferase
APFKJBBA_00820 1.9e-23
APFKJBBA_00821 8.4e-81 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
APFKJBBA_00822 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
APFKJBBA_00823 5.9e-52 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
APFKJBBA_00824 6.2e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
APFKJBBA_00825 6.9e-26 S Protein of unknown function (DUF2508)
APFKJBBA_00826 3.7e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
APFKJBBA_00827 4.5e-52 yaaQ S Cyclic-di-AMP receptor
APFKJBBA_00828 2.8e-154 holB 2.7.7.7 L DNA polymerase III
APFKJBBA_00829 1.3e-57 yabA L Involved in initiation control of chromosome replication
APFKJBBA_00830 1.8e-156 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
APFKJBBA_00831 8.1e-126 fat 3.1.2.21 I Acyl-ACP thioesterase
APFKJBBA_00832 9.8e-86 folT S ECF transporter, substrate-specific component
APFKJBBA_00833 1.5e-132 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
APFKJBBA_00834 2.4e-98 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
APFKJBBA_00835 2.1e-196 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
APFKJBBA_00836 4.3e-09 D nuclear chromosome segregation
APFKJBBA_00837 8.4e-10 D nuclear chromosome segregation
APFKJBBA_00838 3.8e-170
APFKJBBA_00839 2.7e-114
APFKJBBA_00840 6.7e-240 clcA P chloride
APFKJBBA_00841 4.5e-48
APFKJBBA_00842 2.1e-99 S Protein of unknown function (DUF3990)
APFKJBBA_00843 2e-158 ykuT M mechanosensitive ion channel
APFKJBBA_00844 5.9e-219 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
APFKJBBA_00845 2.2e-116 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
APFKJBBA_00846 6.5e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
APFKJBBA_00847 2.4e-68 yslB S Protein of unknown function (DUF2507)
APFKJBBA_00848 6.6e-53 trxA O Belongs to the thioredoxin family
APFKJBBA_00849 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
APFKJBBA_00850 1.6e-91 cvpA S Colicin V production protein
APFKJBBA_00851 1.8e-50 yrzB S Belongs to the UPF0473 family
APFKJBBA_00852 1.4e-72 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
APFKJBBA_00853 2.6e-42 yrzL S Belongs to the UPF0297 family
APFKJBBA_00854 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
APFKJBBA_00855 1.5e-229 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
APFKJBBA_00856 2.5e-183 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
APFKJBBA_00857 1.4e-209 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
APFKJBBA_00858 1.4e-283 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
APFKJBBA_00859 4.5e-31 yajC U Preprotein translocase
APFKJBBA_00860 1.4e-187 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
APFKJBBA_00861 1.6e-100 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
APFKJBBA_00862 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
APFKJBBA_00863 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
APFKJBBA_00864 0.0 nisT V ABC transporter
APFKJBBA_00865 5.1e-208 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
APFKJBBA_00866 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
APFKJBBA_00867 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
APFKJBBA_00868 9.4e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
APFKJBBA_00869 1.7e-82 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
APFKJBBA_00870 2.1e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
APFKJBBA_00871 1.6e-155 corA P CorA-like Mg2+ transporter protein
APFKJBBA_00872 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
APFKJBBA_00873 4.8e-76 rplI J Binds to the 23S rRNA
APFKJBBA_00874 1.1e-245 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
APFKJBBA_00875 2.2e-170 scrK 2.7.1.2, 2.7.1.4 GK ROK family
APFKJBBA_00876 1.6e-131 I Protein of unknown function (DUF2974)
APFKJBBA_00877 4.5e-70 I Protein of unknown function (DUF2974)
APFKJBBA_00878 0.0
APFKJBBA_00879 3.9e-117 yhiD S MgtC family
APFKJBBA_00881 7.9e-114 gph 3.1.3.18 S HAD hydrolase, family IA, variant
APFKJBBA_00882 1.2e-20 WQ51_00220 K Helix-turn-helix XRE-family like proteins
APFKJBBA_00883 1.3e-85 S Protein of unknown function (DUF3278)
APFKJBBA_00884 4.9e-201 S Aldo keto reductase
APFKJBBA_00886 4.6e-224 S Sterol carrier protein domain
APFKJBBA_00887 3e-116 ywnB S NAD(P)H-binding
APFKJBBA_00888 1.6e-185 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
APFKJBBA_00889 0.0 L AAA domain
APFKJBBA_00890 1.6e-230 yhaO L Ser Thr phosphatase family protein
APFKJBBA_00891 3.3e-56 yheA S Belongs to the UPF0342 family
APFKJBBA_00892 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
APFKJBBA_00893 3.6e-162 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
APFKJBBA_00895 1.3e-259 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
APFKJBBA_00896 1.3e-66
APFKJBBA_00897 2e-94 3.6.1.55 L NUDIX domain
APFKJBBA_00898 1.4e-152 neo 2.7.1.87, 2.7.1.95 F Belongs to the aminoglycoside phosphotransferase family
APFKJBBA_00899 3.9e-198 V Beta-lactamase
APFKJBBA_00900 8.4e-63
APFKJBBA_00901 0.0 L helicase activity
APFKJBBA_00902 6.4e-227 K DNA binding
APFKJBBA_00903 0.0 res 2.1.1.72, 3.1.21.5 L Type III restriction enzyme, res subunit
APFKJBBA_00904 2.2e-247 mod 2.1.1.72, 3.1.21.5 L DNA methylase
APFKJBBA_00905 7.4e-39 K Cro/C1-type HTH DNA-binding domain
APFKJBBA_00906 1.1e-77
APFKJBBA_00907 2.5e-114
APFKJBBA_00908 2.6e-61
APFKJBBA_00909 3.2e-36
APFKJBBA_00910 1.3e-232
APFKJBBA_00912 2.7e-23
APFKJBBA_00913 4.9e-51
APFKJBBA_00914 6.1e-221 L Protein of unknown function (DUF2800)
APFKJBBA_00915 1.7e-99 S Protein of unknown function (DUF2815)
APFKJBBA_00916 0.0 polA_2 2.7.7.7 L DNA polymerase
APFKJBBA_00917 2.8e-69 S Psort location Cytoplasmic, score
APFKJBBA_00918 0.0 S Phage plasmid primase, P4
APFKJBBA_00919 2.4e-46 S VRR_NUC
APFKJBBA_00920 4.3e-258 L SNF2 family N-terminal domain
APFKJBBA_00921 2.8e-87
APFKJBBA_00922 1.4e-36
APFKJBBA_00923 2.2e-245 2.1.1.72 KL DNA methylase
APFKJBBA_00924 3.5e-52 S Psort location Cytoplasmic, score
APFKJBBA_00925 6.2e-31 S Domain of unknown function (DUF5049)
APFKJBBA_00926 2.6e-302 S overlaps another CDS with the same product name
APFKJBBA_00927 2.5e-247 S Phage portal protein
APFKJBBA_00928 2.9e-122 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
APFKJBBA_00929 4.1e-220 S Phage capsid family
APFKJBBA_00930 4.3e-43 S Phage gp6-like head-tail connector protein
APFKJBBA_00931 9e-68 S Phage head-tail joining protein
APFKJBBA_00932 3e-69 S Bacteriophage holin family
APFKJBBA_00933 2.5e-145 M Glycosyl hydrolases family 25
APFKJBBA_00934 4.3e-36
APFKJBBA_00935 3.1e-164 L Recombinase zinc beta ribbon domain
APFKJBBA_00936 9.1e-101 L Recombinase zinc beta ribbon domain
APFKJBBA_00937 1.2e-288 L Recombinase
APFKJBBA_00938 2.7e-227
APFKJBBA_00939 8.7e-259 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
APFKJBBA_00940 9.6e-121 spaE S ABC-2 family transporter protein
APFKJBBA_00941 1.6e-108 mutF V ABC transporter, ATP-binding protein
APFKJBBA_00942 1.3e-241 nhaC C Na H antiporter NhaC
APFKJBBA_00943 6.2e-162 salL 2.5.1.63, 2.5.1.94 K S-adenosyl-l-methionine hydroxide adenosyltransferase
APFKJBBA_00944 3.3e-95 S UPF0397 protein
APFKJBBA_00945 0.0 ykoD P ABC transporter, ATP-binding protein
APFKJBBA_00946 3.1e-142 cbiQ P cobalt transport
APFKJBBA_00947 2.7e-118 ybhL S Belongs to the BI1 family
APFKJBBA_00948 0.0 rtpR 1.1.98.6, 1.17.4.1, 1.17.4.2 F ribonucleoside-triphosphate reductase activity
APFKJBBA_00949 4.7e-64 S Domain of unknown function (DUF4430)
APFKJBBA_00950 8.1e-88 S ECF transporter, substrate-specific component
APFKJBBA_00951 2.1e-94 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S cob(I)alamin adenosyltransferase
APFKJBBA_00952 1.7e-128 L Helix-turn-helix domain
APFKJBBA_00953 2.3e-23 L hmm pf00665
APFKJBBA_00954 1.2e-39 L hmm pf00665
APFKJBBA_00955 9.6e-152 S hydrolase
APFKJBBA_00957 7.3e-169 yegS 2.7.1.107 G Lipid kinase
APFKJBBA_00958 1.5e-272 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
APFKJBBA_00959 1.5e-269 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
APFKJBBA_00960 4.3e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
APFKJBBA_00961 1.7e-207 camS S sex pheromone
APFKJBBA_00962 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
APFKJBBA_00963 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
APFKJBBA_00964 2.7e-114 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
APFKJBBA_00965 1.3e-100 S ECF transporter, substrate-specific component
APFKJBBA_00967 7.4e-85 ydcK S Belongs to the SprT family
APFKJBBA_00968 7e-135 M Glycosyltransferase sugar-binding region containing DXD motif
APFKJBBA_00969 1.9e-256 epsU S Polysaccharide biosynthesis protein
APFKJBBA_00970 4.7e-229 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
APFKJBBA_00971 7e-147
APFKJBBA_00972 4.8e-102 V ABC transporter transmembrane region
APFKJBBA_00973 4.9e-148 V ABC transporter transmembrane region
APFKJBBA_00974 0.0 pacL 3.6.3.8 P P-type ATPase
APFKJBBA_00975 3.6e-154 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
APFKJBBA_00976 2.9e-284 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
APFKJBBA_00977 0.0 tuaG GT2 M Glycosyltransferase like family 2
APFKJBBA_00978 2.9e-204 csaB M Glycosyl transferases group 1
APFKJBBA_00979 4.2e-141 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
APFKJBBA_00980 1.5e-67 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
APFKJBBA_00981 4.7e-123 gntR1 K UTRA
APFKJBBA_00982 9.3e-190
APFKJBBA_00983 1.4e-52 P Rhodanese Homology Domain
APFKJBBA_00986 9.9e-166 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
APFKJBBA_00987 1.8e-145 K SIS domain
APFKJBBA_00988 4.2e-08 atl 3.2.1.96, 3.5.1.28 GH73 UW LPXTG-motif cell wall anchor domain protein
APFKJBBA_00989 7e-295 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
APFKJBBA_00990 9.7e-43 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
APFKJBBA_00991 1.7e-123 liaI S membrane
APFKJBBA_00992 1e-78 XK27_02470 K LytTr DNA-binding domain
APFKJBBA_00993 3e-104 yvdD 3.2.2.10 S Belongs to the LOG family
APFKJBBA_00994 8.7e-116 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
APFKJBBA_00995 0.0 uup S ABC transporter, ATP-binding protein
APFKJBBA_00996 8.3e-68
APFKJBBA_00997 9.3e-155 K Helix-turn-helix XRE-family like proteins
APFKJBBA_00998 7.6e-249 scrB 2.7.1.211, 3.2.1.26 GH32 G Glycosyl hydrolases family 32
APFKJBBA_00999 2.9e-40 scrB 2.7.1.211, 3.2.1.26 GH32 G Glycosyl hydrolases family 32
APFKJBBA_01000 0.0 scrA 2.7.1.211 G phosphotransferase system
APFKJBBA_01001 2.7e-188 bglX 3.2.1.21 GH3 G hydrolase, family 3
APFKJBBA_01002 1.1e-228 bglX 3.2.1.21 GH3 G hydrolase, family 3
APFKJBBA_01003 2.6e-185 S AAA domain
APFKJBBA_01004 2.1e-257 pepC 3.4.22.40 E Peptidase C1-like family
APFKJBBA_01005 1.8e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
APFKJBBA_01006 1.1e-256 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
APFKJBBA_01007 3.1e-289 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
APFKJBBA_01008 3.4e-274 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
APFKJBBA_01009 1.7e-78 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
APFKJBBA_01010 1.2e-140 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
APFKJBBA_01011 2e-152 lacT K PRD domain
APFKJBBA_01012 1.9e-56 lacF 2.7.1.196, 2.7.1.205, 2.7.1.207 G PTS system, Lactose/Cellobiose specific IIA subunit
APFKJBBA_01013 8.3e-291 celB 2.7.1.196, 2.7.1.205, 2.7.1.207 G Phosphotransferase system, EIIC
APFKJBBA_01014 5.3e-291 lacG 3.2.1.85 G Belongs to the glycosyl hydrolase 1 family
APFKJBBA_01015 4.2e-98 yvrI K sigma factor activity
APFKJBBA_01016 1.7e-34
APFKJBBA_01017 1.1e-289 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
APFKJBBA_01018 1.7e-210 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
APFKJBBA_01019 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
APFKJBBA_01020 3.3e-228 G Major Facilitator Superfamily
APFKJBBA_01021 6.3e-193 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
APFKJBBA_01022 1.7e-165 S Protein of unknown function DUF262
APFKJBBA_01023 0.0 1.3.5.4 C FMN_bind
APFKJBBA_01024 7.2e-92
APFKJBBA_01025 9.2e-109
APFKJBBA_01026 3.8e-162 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
APFKJBBA_01027 6e-227 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
APFKJBBA_01028 7.6e-115 hlyIII S protein, hemolysin III
APFKJBBA_01029 3.8e-151 DegV S Uncharacterised protein, DegV family COG1307
APFKJBBA_01030 2e-35 yozE S Belongs to the UPF0346 family
APFKJBBA_01031 1.1e-264 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
APFKJBBA_01032 3.2e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
APFKJBBA_01033 9.8e-135 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
APFKJBBA_01034 2.6e-152 dprA LU DNA protecting protein DprA
APFKJBBA_01035 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
APFKJBBA_01036 2.7e-244 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
APFKJBBA_01037 2e-169 xerC D Phage integrase, N-terminal SAM-like domain
APFKJBBA_01038 9.7e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
APFKJBBA_01039 8.2e-252 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
APFKJBBA_01040 4.2e-177 lacX 5.1.3.3 G Aldose 1-epimerase
APFKJBBA_01041 2.6e-98 K LysR substrate binding domain
APFKJBBA_01042 2.3e-207 S zinc-ribbon domain
APFKJBBA_01043 1.4e-189
APFKJBBA_01044 7.4e-88 ntd 2.4.2.6 F Nucleoside
APFKJBBA_01045 4.9e-99 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
APFKJBBA_01046 4.4e-132 XK27_08440 K UTRA domain
APFKJBBA_01047 2e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
APFKJBBA_01048 3.8e-87 uspA T universal stress protein
APFKJBBA_01050 9.8e-169 phnD P Phosphonate ABC transporter
APFKJBBA_01051 4.3e-141 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
APFKJBBA_01052 1.6e-130 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
APFKJBBA_01053 5.4e-147 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
APFKJBBA_01054 7.3e-83
APFKJBBA_01055 1.8e-275 S Calcineurin-like phosphoesterase
APFKJBBA_01056 0.0 asnB 6.3.5.4 E Asparagine synthase
APFKJBBA_01057 7.3e-266 yxbA 6.3.1.12 S ATP-grasp enzyme
APFKJBBA_01058 1.2e-64
APFKJBBA_01059 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
APFKJBBA_01060 5.3e-138 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
APFKJBBA_01061 6.4e-105 S Iron-sulfur cluster assembly protein
APFKJBBA_01062 2.2e-229 XK27_04775 S PAS domain
APFKJBBA_01064 1.1e-149 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
APFKJBBA_01065 1.7e-59 yjgN S Bacterial protein of unknown function (DUF898)
APFKJBBA_01067 3.9e-93 M LysM domain protein
APFKJBBA_01068 3.9e-110 M LysM domain protein
APFKJBBA_01069 2.3e-133 S Putative ABC-transporter type IV
APFKJBBA_01070 5.8e-49 psiE S Phosphate-starvation-inducible E
APFKJBBA_01071 7.9e-75 K acetyltransferase
APFKJBBA_01072 2.2e-180 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
APFKJBBA_01073 2.5e-195 G Psort location CytoplasmicMembrane, score 10.00
APFKJBBA_01074 1.4e-36 licT K CAT RNA binding domain
APFKJBBA_01075 1e-19 licT K transcriptional antiterminator
APFKJBBA_01076 4.8e-131 3.6.4.12 S PD-(D/E)XK nuclease family transposase
APFKJBBA_01077 7.3e-217 L Belongs to the 'phage' integrase family
APFKJBBA_01078 7.7e-15
APFKJBBA_01079 9.5e-91 repB EP Plasmid replication protein
APFKJBBA_01081 1.7e-132 D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
APFKJBBA_01082 1.3e-24
APFKJBBA_01083 2.2e-18 K Helix-turn-helix XRE-family like proteins
APFKJBBA_01085 5.1e-164 yvgN C Aldo keto reductase
APFKJBBA_01086 6.8e-248 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
APFKJBBA_01087 6e-174 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
APFKJBBA_01088 1.1e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
APFKJBBA_01089 4.1e-158 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
APFKJBBA_01090 3.8e-176 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
APFKJBBA_01091 2.5e-35
APFKJBBA_01092 6.2e-185 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
APFKJBBA_01093 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
APFKJBBA_01094 4.5e-97 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
APFKJBBA_01095 5.7e-126 comFC S Competence protein
APFKJBBA_01096 1.1e-242 comFA L Helicase C-terminal domain protein
APFKJBBA_01097 2.5e-118 yvyE 3.4.13.9 S YigZ family
APFKJBBA_01098 2.7e-192 tagO 2.7.8.33, 2.7.8.35 M transferase
APFKJBBA_01099 1.2e-209 rny S Endoribonuclease that initiates mRNA decay
APFKJBBA_01100 1.9e-195 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
APFKJBBA_01101 1.4e-96 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
APFKJBBA_01102 4.3e-125 ymfM S Helix-turn-helix domain
APFKJBBA_01103 1.6e-129 IQ Enoyl-(Acyl carrier protein) reductase
APFKJBBA_01104 2.9e-232 S Peptidase M16
APFKJBBA_01105 1.5e-83 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
APFKJBBA_01106 1.5e-115 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
APFKJBBA_01110 4.8e-216 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
APFKJBBA_01111 3.2e-259 qacA EGP Major facilitator Superfamily
APFKJBBA_01112 5.9e-82 3.6.1.27 I Acid phosphatase homologues
APFKJBBA_01113 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
APFKJBBA_01114 3.9e-301 ytgP S Polysaccharide biosynthesis protein
APFKJBBA_01115 1.4e-214 I Protein of unknown function (DUF2974)
APFKJBBA_01116 7.5e-119
APFKJBBA_01117 4.3e-147 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
APFKJBBA_01118 2.4e-124 M ErfK YbiS YcfS YnhG
APFKJBBA_01119 6.1e-171 dacA 3.4.16.4 M Belongs to the peptidase S11 family
APFKJBBA_01120 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
APFKJBBA_01121 6.5e-173 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
APFKJBBA_01122 2.4e-50
APFKJBBA_01123 9e-77 yjaB 2.3.1.181 K Acetyltransferase (GNAT) domain
APFKJBBA_01124 5.8e-55 1.14.99.57 S Antibiotic biosynthesis monooxygenase
APFKJBBA_01126 3.2e-95 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
APFKJBBA_01127 6e-128 yfeJ 6.3.5.2 F Glutamine amidotransferase class-I
APFKJBBA_01128 1.1e-107 ylbE GM NAD(P)H-binding
APFKJBBA_01129 6.9e-83 yebR 1.8.4.14 T GAF domain-containing protein
APFKJBBA_01130 6.1e-154 3.6.4.12 S PD-(D/E)XK nuclease family transposase
APFKJBBA_01131 8.7e-170 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
APFKJBBA_01132 1.6e-166 yihY S Belongs to the UPF0761 family
APFKJBBA_01133 6.7e-161 map 3.4.11.18 E Methionine Aminopeptidase
APFKJBBA_01134 4.2e-77 fld C Flavodoxin
APFKJBBA_01135 2e-86 gtcA S Teichoic acid glycosylation protein
APFKJBBA_01136 6.5e-215 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
APFKJBBA_01139 2.1e-249 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
APFKJBBA_01140 4.1e-207 yfmL 3.6.4.13 L DEAD DEAH box helicase
APFKJBBA_01141 2.6e-137 M Glycosyl hydrolases family 25
APFKJBBA_01142 1.9e-234 potE E amino acid
APFKJBBA_01143 6.3e-102 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
APFKJBBA_01144 3.6e-252 yhdP S Transporter associated domain
APFKJBBA_01145 1.1e-132
APFKJBBA_01146 1.6e-120 C nitroreductase
APFKJBBA_01147 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
APFKJBBA_01148 8.9e-139 glcR K DeoR C terminal sensor domain
APFKJBBA_01149 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
APFKJBBA_01150 4.6e-76 WQ51_03320 S Protein of unknown function (DUF1149)
APFKJBBA_01151 1.7e-104 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
APFKJBBA_01152 5.4e-212 yubA S AI-2E family transporter
APFKJBBA_01153 9.9e-67 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
APFKJBBA_01154 4.8e-201 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
APFKJBBA_01155 3.9e-234 N Uncharacterized conserved protein (DUF2075)
APFKJBBA_01156 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
APFKJBBA_01157 3.7e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
APFKJBBA_01158 5.2e-150 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
APFKJBBA_01159 6.7e-113 yjbM 2.7.6.5 S RelA SpoT domain protein
APFKJBBA_01160 3.3e-112 yjbK S CYTH
APFKJBBA_01161 7e-107 yjbH Q Thioredoxin
APFKJBBA_01162 1.7e-162 coiA 3.6.4.12 S Competence protein
APFKJBBA_01163 5.5e-118 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
APFKJBBA_01164 4.7e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
APFKJBBA_01165 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
APFKJBBA_01166 1.2e-39 ptsH G phosphocarrier protein HPR
APFKJBBA_01167 2.8e-113 S domain, Protein
APFKJBBA_01168 0.0 S domain, Protein
APFKJBBA_01169 5.3e-192 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
APFKJBBA_01170 5.2e-104 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
APFKJBBA_01171 6.2e-213 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
APFKJBBA_01172 1e-251 gor 1.8.1.7 C pyridine nucleotide-disulfide oxidoreductase
APFKJBBA_01173 3e-166 K AI-2E family transporter
APFKJBBA_01174 1.8e-40
APFKJBBA_01175 2.2e-165 S Alpha beta hydrolase
APFKJBBA_01176 0.0 L Helicase C-terminal domain protein
APFKJBBA_01177 5.7e-160 xth 3.1.11.2 L exodeoxyribonuclease III
APFKJBBA_01178 2.5e-40 S Transglycosylase associated protein
APFKJBBA_01180 1.2e-70 P CorA-like Mg2+ transporter protein
APFKJBBA_01181 8.7e-63 P CorA-like Mg2+ transporter protein
APFKJBBA_01182 0.0 tetP J elongation factor G
APFKJBBA_01183 6e-61 yugI 5.3.1.9 J general stress protein
APFKJBBA_01184 4.8e-179 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
APFKJBBA_01185 2.7e-117 dedA S SNARE-like domain protein
APFKJBBA_01186 8.6e-105 S Protein of unknown function (DUF1461)
APFKJBBA_01187 3.6e-148 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
APFKJBBA_01188 9.1e-98 yutD S Protein of unknown function (DUF1027)
APFKJBBA_01189 3.6e-268 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
APFKJBBA_01190 2e-55
APFKJBBA_01191 8e-268 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
APFKJBBA_01192 2.4e-275 pepV 3.5.1.18 E dipeptidase PepV
APFKJBBA_01193 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M Penicillin binding protein transpeptidase domain
APFKJBBA_01194 9.5e-178 ccpA K catabolite control protein A
APFKJBBA_01195 5.9e-213 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
APFKJBBA_01196 4e-51
APFKJBBA_01198 4.1e-147 S hydrolase
APFKJBBA_01199 3.2e-103 yagU S Protein of unknown function (DUF1440)
APFKJBBA_01200 5.4e-144 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
APFKJBBA_01201 1.5e-76 2.3.1.128 K acetyltransferase
APFKJBBA_01202 0.0 4.2.1.53 S Myosin-crossreactive antigen
APFKJBBA_01203 4.9e-69 yxdD K Bacterial regulatory proteins, tetR family
APFKJBBA_01204 4.5e-261 emrY EGP Major facilitator Superfamily
APFKJBBA_01205 6.4e-255 emrY EGP Major facilitator Superfamily
APFKJBBA_01206 1.4e-144 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
APFKJBBA_01207 2.3e-134 S CAAX amino terminal protease
APFKJBBA_01208 6.9e-162 mleP3 S Membrane transport protein
APFKJBBA_01209 2.1e-105 tag 3.2.2.20 L glycosylase
APFKJBBA_01210 4.2e-194 S Bacteriocin helveticin-J
APFKJBBA_01211 0.0 S domain, Protein
APFKJBBA_01213 3.9e-23 bamA UW LPXTG-motif cell wall anchor domain protein
APFKJBBA_01214 0.0 bamA UW LPXTG-motif cell wall anchor domain protein
APFKJBBA_01215 0.0 M domain protein
APFKJBBA_01216 0.0 lhr L DEAD DEAH box helicase
APFKJBBA_01217 5.4e-253 P P-loop Domain of unknown function (DUF2791)
APFKJBBA_01218 0.0 S TerB-C domain
APFKJBBA_01219 1.3e-99 4.1.1.44 S decarboxylase
APFKJBBA_01220 5.1e-72
APFKJBBA_01221 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
APFKJBBA_01222 4.9e-233 cycA E Amino acid permease
APFKJBBA_01223 2.4e-108 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
APFKJBBA_01224 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
APFKJBBA_01225 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
APFKJBBA_01226 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
APFKJBBA_01228 1.6e-08
APFKJBBA_01229 6.2e-104 S Protein of unknown function (DUF1211)
APFKJBBA_01230 8.7e-75 K LytTr DNA-binding domain
APFKJBBA_01231 1.4e-50 S Protein of unknown function (DUF3021)
APFKJBBA_01232 9.6e-97 K Acetyltransferase (GNAT) domain
APFKJBBA_01233 2.1e-129 ybbM S Uncharacterised protein family (UPF0014)
APFKJBBA_01234 2.1e-109 ybbL S ABC transporter, ATP-binding protein
APFKJBBA_01236 2e-74 3.6.4.12 S PD-(D/E)XK nuclease family transposase
APFKJBBA_01237 1.7e-35 3.6.4.12 S PD-(D/E)XK nuclease family transposase
APFKJBBA_01238 1.8e-41 K peptidyl-tyrosine sulfation
APFKJBBA_01239 2.6e-42
APFKJBBA_01240 5.4e-47
APFKJBBA_01241 5.9e-70 K Transcriptional regulator
APFKJBBA_01242 8.9e-179 MA20_14895 S Conserved hypothetical protein 698
APFKJBBA_01243 1.2e-63
APFKJBBA_01244 6.7e-153 K helix_turn_helix, arabinose operon control protein
APFKJBBA_01245 5e-234 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
APFKJBBA_01246 1.7e-53 S Bacterial toxin of type II toxin-antitoxin system, YafQ
APFKJBBA_01247 1.2e-48 L bacterial-type proximal promoter sequence-specific DNA binding
APFKJBBA_01248 2.3e-78 apfA 2.7.7.72, 3.6.1.61 F NUDIX domain
APFKJBBA_01249 1.3e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
APFKJBBA_01250 4.1e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
APFKJBBA_01251 1.4e-189 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
APFKJBBA_01252 4.3e-153 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
APFKJBBA_01253 4.4e-37 S YtxH-like protein
APFKJBBA_01254 2e-64
APFKJBBA_01255 2.4e-77 hit FG Scavenger mRNA decapping enzyme C-term binding
APFKJBBA_01256 2.4e-133 ecsA V ABC transporter, ATP-binding protein
APFKJBBA_01257 3.9e-226 ecsB U ABC transporter
APFKJBBA_01258 1.7e-122 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
APFKJBBA_01259 3.4e-42 3.6.4.12 S PD-(D/E)XK nuclease family transposase
APFKJBBA_01260 1e-16 3.6.4.12 S PD-(D/E)XK nuclease family transposase
APFKJBBA_01261 5.9e-40
APFKJBBA_01262 5.9e-19
APFKJBBA_01263 1.9e-83 ykuL S (CBS) domain
APFKJBBA_01264 0.0 cadA P P-type ATPase
APFKJBBA_01265 3.5e-200 napA P Sodium/hydrogen exchanger family
APFKJBBA_01267 2.7e-280 V ABC transporter transmembrane region
APFKJBBA_01268 8.5e-159 mutR K Helix-turn-helix XRE-family like proteins
APFKJBBA_01269 6.2e-28
APFKJBBA_01270 4.1e-31
APFKJBBA_01271 2.1e-30
APFKJBBA_01272 4.5e-120 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
APFKJBBA_01273 3.8e-157 S Protein of unknown function (DUF979)
APFKJBBA_01274 2.3e-114 S Protein of unknown function (DUF969)
APFKJBBA_01275 2.7e-234 G PTS system sugar-specific permease component
APFKJBBA_01276 4.5e-269 G PTS system Galactitol-specific IIC component
APFKJBBA_01277 2.2e-93 S Protein of unknown function (DUF1440)
APFKJBBA_01278 6.5e-103 S CAAX protease self-immunity
APFKJBBA_01279 1.5e-195 S DUF218 domain
APFKJBBA_01280 0.0 macB_3 V ABC transporter, ATP-binding protein
APFKJBBA_01281 8.7e-270 cydA 1.10.3.14 C ubiquinol oxidase
APFKJBBA_01282 2.2e-182 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
APFKJBBA_01283 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
APFKJBBA_01284 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
APFKJBBA_01285 1.1e-172 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
APFKJBBA_01286 1.2e-166 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
APFKJBBA_01287 7.1e-195 tcsA S ABC transporter substrate-binding protein PnrA-like
APFKJBBA_01288 4.8e-173 fpaP 3.4.11.5 I Releases the N-terminal proline from various substrates
APFKJBBA_01289 7e-177 nagZ 3.2.1.52 G Glycosyl hydrolase family 3 N terminal domain
APFKJBBA_01290 2e-99 G PTS system sorbose-specific iic component
APFKJBBA_01291 1e-119 G PTS system mannose/fructose/sorbose family IID component
APFKJBBA_01292 1.3e-52 2.7.1.191 G PTS system sorbose subfamily IIB component
APFKJBBA_01293 3.2e-88 blaA6 V Beta-lactamase
APFKJBBA_01294 5.7e-189 ykfB 5.1.1.20 M Belongs to the mandelate racemase muconate lactonizing enzyme family
APFKJBBA_01295 4.1e-130 3.5.2.6 V Beta-lactamase enzyme family
APFKJBBA_01296 2e-150 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
APFKJBBA_01297 1.2e-132 S membrane transporter protein
APFKJBBA_01298 2.2e-27 G PTS system fructose IIA component
APFKJBBA_01299 1e-121 G PTS system mannose/fructose/sorbose family IID component
APFKJBBA_01300 1.1e-91 agaC G PTS system sorbose-specific iic component
APFKJBBA_01301 4.6e-150 agaB 2.7.1.191 K PTS system sorbose subfamily IIB component
APFKJBBA_01303 3.6e-19 S PD-(D/E)XK nuclease family transposase
APFKJBBA_01304 9.8e-160 yeaE S Aldo/keto reductase family
APFKJBBA_01305 1e-133 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
APFKJBBA_01306 7.7e-120 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
APFKJBBA_01307 8.2e-125 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
APFKJBBA_01308 6e-238 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
APFKJBBA_01309 3e-232 pbuG S permease
APFKJBBA_01311 3.7e-110 K helix_turn_helix, mercury resistance
APFKJBBA_01312 2.3e-232 pbuG S permease
APFKJBBA_01313 3.4e-46 I bis(5'-adenosyl)-triphosphatase activity
APFKJBBA_01314 1.1e-226 pbuG S permease
APFKJBBA_01315 3e-69 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
APFKJBBA_01316 4.1e-90
APFKJBBA_01317 5.5e-90
APFKJBBA_01318 1.4e-77 atkY K Penicillinase repressor
APFKJBBA_01319 6.3e-66 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
APFKJBBA_01320 1.1e-49 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
APFKJBBA_01321 0.0 copA 3.6.3.54 P P-type ATPase
APFKJBBA_01322 4.4e-155 ropB K Helix-turn-helix XRE-family like proteins
APFKJBBA_01323 0.0 pepO 3.4.24.71 O Peptidase family M13
APFKJBBA_01324 4.1e-286 E Amino acid permease
APFKJBBA_01325 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
APFKJBBA_01326 1e-248 ynbB 4.4.1.1 P aluminum resistance
APFKJBBA_01327 2.3e-75 K Acetyltransferase (GNAT) domain
APFKJBBA_01328 2.3e-232 EGP Sugar (and other) transporter
APFKJBBA_01329 6.5e-69 S Iron-sulphur cluster biosynthesis
APFKJBBA_01330 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
APFKJBBA_01331 1.5e-115 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
APFKJBBA_01332 2.2e-107
APFKJBBA_01333 1.7e-151 ropB K Transcriptional regulator
APFKJBBA_01334 1.2e-201 EGP Major facilitator Superfamily
APFKJBBA_01335 5.8e-291 clcA P chloride
APFKJBBA_01336 6.6e-270 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
APFKJBBA_01337 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
APFKJBBA_01338 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
APFKJBBA_01339 2.8e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
APFKJBBA_01340 3.7e-149 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
APFKJBBA_01341 6.6e-60 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
APFKJBBA_01342 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
APFKJBBA_01343 7e-256 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
APFKJBBA_01344 3.2e-206 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
APFKJBBA_01346 4.7e-88 comGF U Putative Competence protein ComGF
APFKJBBA_01347 1.5e-186 ytxK 2.1.1.72 L N-6 DNA Methylase
APFKJBBA_01348 7.3e-225 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
APFKJBBA_01351 6.7e-225 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
APFKJBBA_01352 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
APFKJBBA_01353 4.5e-183 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
APFKJBBA_01354 3.5e-199 cpoA GT4 M Glycosyltransferase, group 1 family protein
APFKJBBA_01355 4.2e-217 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
APFKJBBA_01362 0.0 3.6.3.8 P ATPase, P-type (transporting), HAD superfamily, subfamily IC
APFKJBBA_01364 6.2e-80 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
APFKJBBA_01365 2.2e-19
APFKJBBA_01366 5.2e-153 yitS S EDD domain protein, DegV family
APFKJBBA_01367 3.4e-137 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
APFKJBBA_01368 7.1e-132 S Protein of unknown function (DUF975)
APFKJBBA_01369 2e-52 S Enterocin A Immunity
APFKJBBA_01370 4e-133 gntR K UbiC transcription regulator-associated domain protein
APFKJBBA_01371 4.1e-175 rihB 3.2.2.1 F Nucleoside
APFKJBBA_01372 4.8e-128 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
APFKJBBA_01373 3.2e-164 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
APFKJBBA_01375 1.7e-84 dps P Belongs to the Dps family
APFKJBBA_01376 2.2e-282 S C4-dicarboxylate anaerobic carrier
APFKJBBA_01377 2.6e-118 phoU P Plays a role in the regulation of phosphate uptake
APFKJBBA_01378 2.7e-140 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
APFKJBBA_01379 1.1e-147 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
APFKJBBA_01380 5.4e-156 pstA P Phosphate transport system permease protein PstA
APFKJBBA_01381 2.1e-161 pstC P probably responsible for the translocation of the substrate across the membrane
APFKJBBA_01382 1.3e-159 pstS P Phosphate
APFKJBBA_01383 6.2e-96 K Acetyltransferase (GNAT) domain
APFKJBBA_01384 3.8e-131 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
APFKJBBA_01385 4.1e-257 glnPH2 P ABC transporter permease
APFKJBBA_01386 4.8e-159 rssA S Phospholipase, patatin family
APFKJBBA_01387 0.0 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
APFKJBBA_01388 6.8e-56 S Enterocin A Immunity
APFKJBBA_01390 1.9e-205 EGP Major facilitator superfamily
APFKJBBA_01391 5.2e-113 udk 2.7.1.48 F Cytidine monophosphokinase
APFKJBBA_01392 8.3e-84 S Putative adhesin
APFKJBBA_01393 0.0 treB 2.7.1.211 G phosphotransferase system
APFKJBBA_01394 1.1e-130 treR K UTRA
APFKJBBA_01395 0.0 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
APFKJBBA_01396 4.8e-151 3.6.4.12 S PD-(D/E)XK nuclease family transposase
APFKJBBA_01397 2e-107 glnP P ABC transporter permease
APFKJBBA_01398 3.2e-110 gluC P ABC transporter permease
APFKJBBA_01399 9.1e-150 glnH ET ABC transporter
APFKJBBA_01400 2.7e-137 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
APFKJBBA_01401 1.3e-148 glnH ET ABC transporter
APFKJBBA_01402 0.0 V ABC transporter transmembrane region
APFKJBBA_01403 0.0 XK27_09600 V ABC transporter, ATP-binding protein
APFKJBBA_01404 1.9e-59 K Transcriptional regulator, MarR family
APFKJBBA_01405 7.9e-152 S Alpha beta hydrolase
APFKJBBA_01406 2.9e-208 naiP EGP Major facilitator Superfamily
APFKJBBA_01407 1.6e-266 dtpT U amino acid peptide transporter
APFKJBBA_01408 0.0 3.2.1.177 GH31 G Glycosyl hydrolases family 31
APFKJBBA_01409 8.2e-182 lacI3 K helix_turn _helix lactose operon repressor
APFKJBBA_01410 0.0 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
APFKJBBA_01411 6.8e-72 2.7.1.191 G PTS system fructose IIA component
APFKJBBA_01412 3.4e-152 G PTS system mannose/fructose/sorbose family IID component
APFKJBBA_01413 4.7e-103 G PTS system sorbose-specific iic component
APFKJBBA_01414 5.9e-88 2.7.1.191 G PTS system sorbose subfamily IIB component
APFKJBBA_01416 2.7e-210 pepA E M42 glutamyl aminopeptidase
APFKJBBA_01417 5.8e-82
APFKJBBA_01418 6.1e-73 K helix_turn_helix multiple antibiotic resistance protein
APFKJBBA_01419 1.5e-32
APFKJBBA_01420 1.9e-217 mdtG EGP Major facilitator Superfamily
APFKJBBA_01421 3.3e-112 3.6.1.27 I Acid phosphatase homologues
APFKJBBA_01422 2.1e-67 glsA 3.5.1.2 E Belongs to the glutaminase family
APFKJBBA_01423 1.2e-83 glsA 3.5.1.2 E Belongs to the glutaminase family
APFKJBBA_01424 3.7e-260 P Sodium:sulfate symporter transmembrane region
APFKJBBA_01425 0.0 1.3.5.4 C FMN_bind
APFKJBBA_01426 8.2e-165 K LysR family
APFKJBBA_01427 3e-201 S PFAM Archaeal ATPase
APFKJBBA_01428 2.7e-99 lacG 3.2.1.85 G Belongs to the glycosyl hydrolase 1 family
APFKJBBA_01429 3.2e-177 lacG 3.2.1.85 G Belongs to the glycosyl hydrolase 1 family
APFKJBBA_01430 0.0 celB 2.7.1.196, 2.7.1.205, 2.7.1.207 G Phosphotransferase system, EIIC
APFKJBBA_01431 8.7e-57 lacF 2.7.1.196, 2.7.1.205, 2.7.1.207 G PTS system, Lactose/Cellobiose specific IIA subunit
APFKJBBA_01432 2.1e-149 lacT K CAT RNA binding domain
APFKJBBA_01433 1.3e-38
APFKJBBA_01434 1.4e-267 gatC G PTS system sugar-specific permease component
APFKJBBA_01435 6.3e-51 2.7.1.200, 2.7.1.204 G PTS system, Lactose/Cellobiose specific IIB subunit
APFKJBBA_01436 7.2e-86 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
APFKJBBA_01437 1.6e-128 S Domain of unknown function (DUF4867)
APFKJBBA_01438 1.9e-106 rpiB 2.1.1.222, 2.1.1.64, 5.3.1.26, 5.3.1.6 G Ribose/Galactose Isomerase
APFKJBBA_01439 9.4e-74 lacA 5.3.1.26 G Ribose/Galactose Isomerase
APFKJBBA_01440 1.3e-137 lacR K DeoR C terminal sensor domain
APFKJBBA_01441 2.1e-241 pyrP F Permease
APFKJBBA_01442 5.2e-25 S PFAM Archaeal ATPase
APFKJBBA_01444 1.5e-21 K DNA-binding transcription factor activity
APFKJBBA_01445 4.4e-139 G Pts system
APFKJBBA_01446 1e-182 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
APFKJBBA_01448 9.3e-54 K Transcriptional regulator
APFKJBBA_01449 1.5e-189 L COG2963 Transposase and inactivated derivatives
APFKJBBA_01451 5e-60
APFKJBBA_01455 2.8e-31 I Protein of unknown function (DUF2974)
APFKJBBA_01467 5.6e-149 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
APFKJBBA_01468 6.2e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
APFKJBBA_01469 4.8e-122 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
APFKJBBA_01470 2.7e-129 ymfC K UTRA
APFKJBBA_01471 8.2e-254 3.5.1.18 E Peptidase family M20/M25/M40
APFKJBBA_01472 3.3e-180 aspG 3.4.19.5, 3.5.1.1, 3.5.1.26 E Asparaginase
APFKJBBA_01473 2.9e-93 S Glycine/sarcosine/betaine reductase selenoprotein B (GRDB)
APFKJBBA_01474 5.6e-55 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
APFKJBBA_01475 4.1e-150 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
APFKJBBA_01476 1.2e-117 cutC P Participates in the control of copper homeostasis
APFKJBBA_01477 2.8e-254 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
APFKJBBA_01478 1.4e-75 K UTRA
APFKJBBA_01479 5.9e-12
APFKJBBA_01480 4e-69 rmaI K Transcriptional regulator
APFKJBBA_01481 1.4e-211 EGP Major facilitator Superfamily
APFKJBBA_01482 5.7e-230 ygeX 4.3.1.15, 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
APFKJBBA_01483 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
APFKJBBA_01484 1.1e-160 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
APFKJBBA_01485 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
APFKJBBA_01486 1e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
APFKJBBA_01487 2.5e-250 dnaB L Replication initiation and membrane attachment
APFKJBBA_01488 2.7e-163 dnaI L Primosomal protein DnaI
APFKJBBA_01489 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
APFKJBBA_01490 1.4e-72 K LytTr DNA-binding domain
APFKJBBA_01491 1.9e-74 S Protein of unknown function (DUF3021)
APFKJBBA_01492 4.8e-171 V ABC transporter
APFKJBBA_01493 1.3e-131 S domain protein
APFKJBBA_01494 4e-87 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
APFKJBBA_01495 2.4e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
APFKJBBA_01496 6.6e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
APFKJBBA_01497 9.8e-191 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
APFKJBBA_01498 3.5e-91 yqeG S HAD phosphatase, family IIIA
APFKJBBA_01499 4.7e-210 yqeH S Ribosome biogenesis GTPase YqeH
APFKJBBA_01500 4.4e-120 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
APFKJBBA_01501 1.7e-110 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
APFKJBBA_01502 8.2e-60 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
APFKJBBA_01503 2.2e-218 ylbM S Belongs to the UPF0348 family
APFKJBBA_01504 2.9e-96 yceD S Uncharacterized ACR, COG1399
APFKJBBA_01505 1.1e-130 K response regulator
APFKJBBA_01506 1.9e-281 arlS 2.7.13.3 T Histidine kinase
APFKJBBA_01507 1.1e-170 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
APFKJBBA_01508 3.8e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
APFKJBBA_01509 9.6e-138 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
APFKJBBA_01510 7.3e-64 yodB K Transcriptional regulator, HxlR family
APFKJBBA_01511 8.1e-204 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
APFKJBBA_01512 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
APFKJBBA_01513 2.9e-204 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
APFKJBBA_01514 4e-65 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
APFKJBBA_01515 0.0 S membrane
APFKJBBA_01516 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
APFKJBBA_01517 7.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
APFKJBBA_01518 5.6e-87 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
APFKJBBA_01519 4.5e-118 gluP 3.4.21.105 S Rhomboid family
APFKJBBA_01520 6e-35 yqgQ S Bacterial protein of unknown function (DUF910)
APFKJBBA_01521 1.5e-57 yqhL P Rhodanese-like protein
APFKJBBA_01522 1.1e-18 S Protein of unknown function (DUF3042)
APFKJBBA_01523 9.7e-169 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
APFKJBBA_01524 1.1e-261 glnA 6.3.1.2 E glutamine synthetase
APFKJBBA_01525 2.8e-205 EGP Major facilitator Superfamily
APFKJBBA_01526 4.3e-152 S haloacid dehalogenase-like hydrolase
APFKJBBA_01527 2.4e-07
APFKJBBA_01528 8.1e-179 D Alpha beta
APFKJBBA_01529 6e-216 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
APFKJBBA_01530 3.9e-221 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
APFKJBBA_01531 2.9e-218 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
APFKJBBA_01532 9.2e-264 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
APFKJBBA_01533 7.8e-146 recX 2.4.1.337 GT4 S Regulatory protein RecX
APFKJBBA_01534 2.4e-112 ygaC J Belongs to the UPF0374 family
APFKJBBA_01535 4.9e-90
APFKJBBA_01536 3e-78
APFKJBBA_01537 4.7e-157 hlyX S Transporter associated domain
APFKJBBA_01538 7.9e-304 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
APFKJBBA_01539 4.3e-43 XK27_09445 S Domain of unknown function (DUF1827)
APFKJBBA_01540 0.0 clpE O Belongs to the ClpA ClpB family
APFKJBBA_01541 6.9e-26
APFKJBBA_01542 1.4e-66 fhaB 4.3.1.7 UW LPXTG-motif cell wall anchor domain protein

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)