ORF_ID e_value Gene_name EC_number CAZy COGs Description
DILKNDFD_00009 5.3e-11
DILKNDFD_00015 1.3e-140 mreC M Involved in formation and maintenance of cell shape
DILKNDFD_00016 8.2e-88 mreD M Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
DILKNDFD_00017 2e-96 usp 3.5.1.28 CBM50 S CHAP domain
DILKNDFD_00018 4.3e-175 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DILKNDFD_00019 2.5e-26
DILKNDFD_00020 5.9e-219 araT 2.6.1.1 E Aminotransferase
DILKNDFD_00021 1.6e-143 recO L Involved in DNA repair and RecF pathway recombination
DILKNDFD_00022 1.3e-179 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
DILKNDFD_00023 4.2e-34 acpP1 IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
DILKNDFD_00024 5.2e-130 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
DILKNDFD_00025 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
DILKNDFD_00026 1.3e-276 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
DILKNDFD_00027 4.8e-185 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
DILKNDFD_00028 1.4e-101 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
DILKNDFD_00029 1.9e-294 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
DILKNDFD_00030 1e-90 L transposase activity
DILKNDFD_00031 3.5e-50 L transposition
DILKNDFD_00032 2e-32 L Integrase core domain protein
DILKNDFD_00033 2.3e-161 S CHAP domain
DILKNDFD_00034 1e-240 purD 6.3.4.13 F Belongs to the GARS family
DILKNDFD_00035 4.9e-76 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
DILKNDFD_00036 2.2e-204 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
DILKNDFD_00037 7e-141 1.1.1.169 H Ketopantoate reductase
DILKNDFD_00038 1e-23
DILKNDFD_00039 8.7e-248 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DILKNDFD_00040 0.0 argS 6.1.1.19 J Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
DILKNDFD_00041 2e-211 sip L Belongs to the 'phage' integrase family
DILKNDFD_00042 4.5e-15 K Cro/C1-type HTH DNA-binding domain
DILKNDFD_00043 1.2e-20 K TRANSCRIPTIONal
DILKNDFD_00047 1.2e-14
DILKNDFD_00048 3.1e-22
DILKNDFD_00049 1e-143 KL Phage plasmid primase P4 family
DILKNDFD_00050 2e-296 S DNA primase
DILKNDFD_00052 2.3e-12
DILKNDFD_00055 1.5e-52
DILKNDFD_00056 8.2e-70 argR K Regulates arginine biosynthesis genes
DILKNDFD_00057 1e-57 ymcA 3.6.3.21 S Belongs to the UPF0342 family
DILKNDFD_00058 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
DILKNDFD_00059 2.3e-78 S Protein of unknown function (DUF3021)
DILKNDFD_00060 5.4e-69 K LytTr DNA-binding domain
DILKNDFD_00062 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
DILKNDFD_00064 7.8e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
DILKNDFD_00065 6.4e-107 tag 3.2.2.20 L 3-methyladenine DNA glycosylase
DILKNDFD_00066 1e-232 cinA 3.5.1.42 S Belongs to the CinA family
DILKNDFD_00067 4.7e-205 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DILKNDFD_00068 2.3e-66 spxA_2 1.20.4.1 P Belongs to the ArsC family
DILKNDFD_00069 2.4e-200 ilvE 2.6.1.42 E Aminotransferase
DILKNDFD_00070 1.1e-15 S Protein of unknown function (DUF2969)
DILKNDFD_00073 8.4e-205 rpsA 1.17.7.4 J ribosomal protein S1
DILKNDFD_00076 1e-100 S Domain of Unknown Function with PDB structure (DUF3862)
DILKNDFD_00077 6.1e-70 M Pfam SNARE associated Golgi protein
DILKNDFD_00078 9.8e-233 murN 2.3.2.10, 2.3.2.16 V FemAB family
DILKNDFD_00079 3e-51 S oxidoreductase
DILKNDFD_00080 1.2e-65 S oxidoreductase
DILKNDFD_00081 3.7e-48 XK27_09445 S Domain of unknown function (DUF1827)
DILKNDFD_00082 1.8e-86 mutT 3.5.4.33, 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
DILKNDFD_00083 0.0 clpE O Belongs to the ClpA ClpB family
DILKNDFD_00084 1.2e-180 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DILKNDFD_00085 1.3e-34 ykuJ S protein conserved in bacteria
DILKNDFD_00086 7.5e-118 WQ51_01820 P Binding-protein-dependent transport system inner membrane component
DILKNDFD_00087 2.2e-131 glnQ 3.6.3.21 E abc transporter atp-binding protein
DILKNDFD_00088 3.1e-78 feoA P FeoA domain protein
DILKNDFD_00089 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
DILKNDFD_00090 1.5e-07
DILKNDFD_00091 1.5e-35 yugF I carboxylic ester hydrolase activity
DILKNDFD_00092 7.5e-23 I Alpha/beta hydrolase family
DILKNDFD_00093 3.9e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
DILKNDFD_00094 7.8e-149 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DILKNDFD_00095 0.0 pbp2b 3.4.16.4 M penicillin-binding protein
DILKNDFD_00096 2.2e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
DILKNDFD_00097 1.7e-63 licT K transcriptional antiterminator
DILKNDFD_00098 6.8e-53 licT K transcriptional antiterminator
DILKNDFD_00099 5.9e-88 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
DILKNDFD_00100 1.1e-63 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
DILKNDFD_00101 1.3e-165 era M An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DILKNDFD_00102 1.9e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
DILKNDFD_00103 1.3e-105 coaE 2.7.1.24, 3.2.2.23, 4.2.99.18 GH23 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DILKNDFD_00104 2.9e-221 mdtG EGP Major facilitator Superfamily
DILKNDFD_00105 2e-33 secG U Preprotein translocase subunit SecG
DILKNDFD_00106 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
DILKNDFD_00107 1.1e-80 smpB O the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
DILKNDFD_00108 3.7e-276 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DILKNDFD_00109 1.7e-63 yugI 5.3.1.9 J RNA binding protein, contains ribosomal protein S1 domain
DILKNDFD_00110 4.2e-211 pepQ 3.4.13.9 E Belongs to the peptidase M24B family
DILKNDFD_00111 4.4e-183 ccpA K Catabolite control protein A
DILKNDFD_00112 2.8e-28 yyaQ S YjbR
DILKNDFD_00113 6.6e-101 yyaQ V Protein conserved in bacteria
DILKNDFD_00114 1.3e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
DILKNDFD_00115 1e-78 yueI S Protein of unknown function (DUF1694)
DILKNDFD_00116 9.6e-247 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
DILKNDFD_00117 2e-25 WQ51_00785
DILKNDFD_00118 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
DILKNDFD_00119 2e-219 ywbD 2.1.1.191 J Methyltransferase
DILKNDFD_00120 8.6e-122 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
DILKNDFD_00121 1.7e-162 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
DILKNDFD_00122 3.5e-202 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
DILKNDFD_00123 4.5e-219 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
DILKNDFD_00124 2.2e-207 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
DILKNDFD_00125 3.2e-53 yheA S Belongs to the UPF0342 family
DILKNDFD_00126 3e-173 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
DILKNDFD_00127 8.3e-235 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
DILKNDFD_00128 1.7e-87 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
DILKNDFD_00129 2.3e-153 pheA 4.2.1.51 E Prephenate dehydratase
DILKNDFD_00130 1.4e-238 msrR K Transcriptional regulator
DILKNDFD_00131 4.3e-156 ydiA P C4-dicarboxylate transporter malic acid transport protein
DILKNDFD_00132 2.4e-203 I acyl-CoA dehydrogenase
DILKNDFD_00133 4.5e-97 mip S hydroperoxide reductase activity
DILKNDFD_00134 1.7e-257 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DILKNDFD_00135 8.9e-20
DILKNDFD_00136 3.2e-46
DILKNDFD_00137 1e-31 K Cro/C1-type HTH DNA-binding domain
DILKNDFD_00138 7.8e-50 dam 2.1.1.72 L D12 class N6 adenine-specific DNA methyltransferase
DILKNDFD_00139 5.7e-34 estA E GDSL-like Lipase/Acylhydrolase
DILKNDFD_00140 2.6e-93
DILKNDFD_00141 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
DILKNDFD_00142 7.1e-172 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
DILKNDFD_00143 3.1e-53 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
DILKNDFD_00144 5.7e-189 S CRISPR-associated protein Csn2 subfamily St
DILKNDFD_00145 2.4e-147 ycgQ S TIGR03943 family
DILKNDFD_00146 1.5e-153 XK27_03015 S permease
DILKNDFD_00148 0.0 yhgF K Transcriptional accessory protein
DILKNDFD_00149 9.9e-42 pspC KT PspC domain
DILKNDFD_00150 2.3e-170 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
DILKNDFD_00151 4e-147 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
DILKNDFD_00153 5.5e-69 ytxH S General stress protein
DILKNDFD_00155 2.6e-177 yegQ O Peptidase U32
DILKNDFD_00156 3.4e-252 yegQ O Peptidase U32
DILKNDFD_00157 8.1e-46 S CHY zinc finger
DILKNDFD_00158 8.4e-88 bioY S biotin synthase
DILKNDFD_00160 5.2e-33 XK27_12190 S protein conserved in bacteria
DILKNDFD_00161 7.8e-236 mntH P H( )-stimulated, divalent metal cation uptake system
DILKNDFD_00162 1.3e-11
DILKNDFD_00163 1.2e-67 nudG 3.6.1.55, 3.6.1.65 L Belongs to the Nudix hydrolase family
DILKNDFD_00164 0.0 L helicase
DILKNDFD_00165 9.9e-288 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
DILKNDFD_00166 1e-163 M LysM domain
DILKNDFD_00167 7.6e-16
DILKNDFD_00168 2.3e-175 S hydrolase
DILKNDFD_00169 4.3e-115 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase
DILKNDFD_00170 7.9e-82 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
DILKNDFD_00171 2.8e-155 XK27_00880 3.5.1.28 M Glycosyl hydrolase, family 25
DILKNDFD_00172 2.7e-27 P Hemerythrin HHE cation binding domain protein
DILKNDFD_00173 2.3e-113 1.14.14.5 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
DILKNDFD_00174 7.2e-23 MA20_36090 S Protein of unknown function (DUF2974)
DILKNDFD_00175 1.2e-21 MA20_36090 S Protein of unknown function (DUF2974)
DILKNDFD_00176 0.0 hsdR 3.1.21.3 V Type I restriction enzyme R protein N terminus (HSDR_N)
DILKNDFD_00177 6.6e-290 hsdM 2.1.1.72 V N-6 DNA Methylase
DILKNDFD_00178 2.2e-147 3.1.21.3 V type I restriction modification DNA specificity domain
DILKNDFD_00180 2.5e-44
DILKNDFD_00181 3e-38
DILKNDFD_00182 3e-171 spd F DNA RNA non-specific endonuclease
DILKNDFD_00183 1.7e-91 lemA S LemA family
DILKNDFD_00184 2.3e-130 htpX O Belongs to the peptidase M48B family
DILKNDFD_00185 1.8e-73 S Psort location CytoplasmicMembrane, score
DILKNDFD_00186 6.2e-56 S Domain of unknown function (DUF4430)
DILKNDFD_00187 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
DILKNDFD_00188 1.2e-183 holA 2.7.7.7 L DNA polymerase III delta subunit
DILKNDFD_00189 8.5e-113 sodA 1.15.1.1 C radicals which are normally produced within the cells and which are toxic to biological systems
DILKNDFD_00190 1.9e-23 L Transposase
DILKNDFD_00191 5e-22 3.5.2.6 V D-alanyl-D-alanine carboxypeptidase
DILKNDFD_00192 1.3e-114 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
DILKNDFD_00193 3.2e-92 dps P Belongs to the Dps family
DILKNDFD_00194 1.1e-80 perR P Belongs to the Fur family
DILKNDFD_00195 8.4e-28 yqgQ S protein conserved in bacteria
DILKNDFD_00196 2.2e-179 glk 2.7.1.2 G Glucokinase
DILKNDFD_00197 0.0 typA T GTP-binding protein TypA
DILKNDFD_00199 1.6e-252 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DILKNDFD_00200 1e-201 murG 2.4.1.227 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DILKNDFD_00201 1.8e-177 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
DILKNDFD_00202 8e-252 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
DILKNDFD_00203 5.4e-237 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DILKNDFD_00204 2.3e-122 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
DILKNDFD_00205 1.4e-96 sepF D cell septum assembly
DILKNDFD_00206 2e-34 yggT D integral membrane protein
DILKNDFD_00207 6.1e-143 ylmH T S4 RNA-binding domain
DILKNDFD_00208 1.8e-135 divIVA D Cell division protein DivIVA
DILKNDFD_00209 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DILKNDFD_00210 8.4e-10
DILKNDFD_00211 3.2e-231 mntH P Mn2 and Fe2 transporters of the NRAMP family
DILKNDFD_00212 2e-45 rpmE2 J 50S ribosomal protein L31
DILKNDFD_00213 1.5e-177 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
DILKNDFD_00214 1e-184 nrnA 3.1.13.3, 3.1.3.7 S domain protein
DILKNDFD_00215 8.9e-155 gst O Glutathione S-transferase
DILKNDFD_00216 4.6e-188 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
DILKNDFD_00217 2.4e-112 tdk 2.7.1.21 F thymidine kinase
DILKNDFD_00218 3e-193 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DILKNDFD_00219 1.8e-153 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
DILKNDFD_00220 2.5e-109 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
DILKNDFD_00221 1.8e-234 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DILKNDFD_00222 1.2e-177 ndpA S 37-kD nucleoid-associated bacterial protein
DILKNDFD_00223 8e-100 pvaA M lytic transglycosylase activity
DILKNDFD_00224 0.0 yfiB1 V abc transporter atp-binding protein
DILKNDFD_00225 0.0 XK27_10035 V abc transporter atp-binding protein
DILKNDFD_00226 1.5e-09 S D-Ala-teichoic acid biosynthesis protein
DILKNDFD_00227 1.4e-297 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
DILKNDFD_00228 3.9e-237 dltB M Membrane protein involved in D-alanine export
DILKNDFD_00229 2.2e-35 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
DILKNDFD_00230 3.6e-230 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DILKNDFD_00231 6.3e-34 L Integrase core domain protein
DILKNDFD_00232 9.6e-32 L transposition
DILKNDFD_00233 6.5e-54 L transposition
DILKNDFD_00234 7.7e-19 L transposase activity
DILKNDFD_00235 0.0 3.6.3.8 P cation transport ATPase
DILKNDFD_00236 0.0 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH component I
DILKNDFD_00238 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
DILKNDFD_00239 7.3e-166 metF 1.5.1.20 E reductase
DILKNDFD_00240 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
DILKNDFD_00241 1.7e-94 panT S ECF transporter, substrate-specific component
DILKNDFD_00242 4.8e-94 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
DILKNDFD_00243 1.2e-120 coaB 4.1.1.36, 6.3.2.5 H Phosphopantothenate-cysteine ligase
DILKNDFD_00244 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
DILKNDFD_00245 7.5e-118 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
DILKNDFD_00246 1e-29 T PhoQ Sensor
DILKNDFD_00247 1.1e-13 L Transposase
DILKNDFD_00248 2.1e-30 rpsT J rRNA binding
DILKNDFD_00249 1.9e-172 coaA 2.7.1.33 F Pantothenic acid kinase
DILKNDFD_00250 1.8e-107 rsmC 2.1.1.172 J Methyltransferase small domain protein
DILKNDFD_00251 1.9e-25 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
DILKNDFD_00252 3e-23 pdp 2.4.2.2, 2.4.2.4 F phosphorylase activity
DILKNDFD_00253 7.1e-99 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
DILKNDFD_00254 2.7e-21 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
DILKNDFD_00255 4e-63 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
DILKNDFD_00256 1.3e-69 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
DILKNDFD_00257 9.5e-192 tcsA S ABC-type transport system, periplasmic component surface lipoprotein
DILKNDFD_00258 3.7e-282 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
DILKNDFD_00259 4.7e-191 yufP S Belongs to the binding-protein-dependent transport system permease family
DILKNDFD_00260 4.8e-171 yufQ S Belongs to the binding-protein-dependent transport system permease family
DILKNDFD_00261 8.9e-121 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
DILKNDFD_00262 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
DILKNDFD_00263 3.1e-81 ypmB S Protein conserved in bacteria
DILKNDFD_00264 4.7e-216 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
DILKNDFD_00265 4.9e-262 asnS 6.1.1.22 J Catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
DILKNDFD_00266 1.5e-07
DILKNDFD_00267 2.4e-30
DILKNDFD_00268 3e-13
DILKNDFD_00269 3e-63 tdcF 3.5.99.10 J endoribonuclease L-PSP
DILKNDFD_00270 4.4e-123 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
DILKNDFD_00271 2.2e-81 queD 4.1.2.50, 4.2.3.12 H synthase
DILKNDFD_00272 3e-133 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
DILKNDFD_00273 6.5e-95 queF 1.7.1.13 S Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily
DILKNDFD_00274 2.2e-19 D nuclear chromosome segregation
DILKNDFD_00275 2.8e-137 yejC S cyclic nucleotide-binding protein
DILKNDFD_00276 1.2e-163 rapZ S Displays ATPase and GTPase activities
DILKNDFD_00277 4.8e-182 ybhK S Required for morphogenesis under gluconeogenic growth conditions
DILKNDFD_00278 8.7e-162 whiA K May be required for sporulation
DILKNDFD_00279 8.2e-120 pepD E Dipeptidase
DILKNDFD_00280 2.6e-44 pepD E Dipeptidase
DILKNDFD_00281 1.5e-75 tspO T TspO/MBR family
DILKNDFD_00282 1.9e-59 S Uncharacterised lipoprotein family
DILKNDFD_00283 4.9e-63 tnp L DDE domain
DILKNDFD_00284 7.1e-28 L transposase activity
DILKNDFD_00286 1.7e-25
DILKNDFD_00287 5.4e-32 cspD K Cold shock protein domain
DILKNDFD_00288 9.4e-43 K Cold-Shock Protein
DILKNDFD_00289 0.0 copB 3.6.3.4 P haloacid dehalogenase-like hydrolase
DILKNDFD_00290 8.4e-190 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
DILKNDFD_00291 2.3e-170 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
DILKNDFD_00292 2.7e-219 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
DILKNDFD_00293 1.5e-95 cysE 2.3.1.30 E Bacterial transferase hexapeptide (six repeats)
DILKNDFD_00294 3.9e-56 hsdS 2.1.1.72, 3.1.21.3 V type I restriction modification DNA specificity domain
DILKNDFD_00295 4.9e-111 hsdM 2.1.1.72 V type I restriction-modification system
DILKNDFD_00296 1.6e-29 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
DILKNDFD_00297 4.5e-155 glcU U Glucose uptake
DILKNDFD_00298 1.1e-08 mycA 4.2.1.53 S Myosin-crossreactive antigen
DILKNDFD_00299 1.2e-79 hsdM 2.1.1.72 V HsdM N-terminal domain
DILKNDFD_00300 1.3e-88 XK27_10720 D peptidase activity
DILKNDFD_00301 1.4e-292 adcA P Belongs to the bacterial solute-binding protein 9 family
DILKNDFD_00302 2.2e-08
DILKNDFD_00303 2.7e-172 yeiH S Membrane
DILKNDFD_00304 2.4e-114 mur1 NU muramidase
DILKNDFD_00305 2.4e-83 L transposition
DILKNDFD_00306 4.5e-166 cpsY K Transcriptional regulator
DILKNDFD_00307 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
DILKNDFD_00308 2.5e-58 phnA P Alkylphosphonate utilization operon protein PhnA
DILKNDFD_00309 5.3e-105 artQ P ABC transporter (Permease
DILKNDFD_00310 1.5e-112 glnQ 3.6.3.21 E abc transporter atp-binding protein
DILKNDFD_00311 1.2e-157 aatB ET ABC transporter substrate-binding protein
DILKNDFD_00312 1.2e-146 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DILKNDFD_00313 2.1e-07
DILKNDFD_00314 1.6e-58 adhP 1.1.1.1 C alcohol dehydrogenase
DILKNDFD_00315 4.2e-113 adhP 1.1.1.1 C alcohol dehydrogenase
DILKNDFD_00316 8.3e-49 sthIM 2.1.1.72 L Adenine specific DNA methylase Mod
DILKNDFD_00317 4.3e-302 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
DILKNDFD_00318 2e-126 gntR1 K transcriptional
DILKNDFD_00319 1.1e-53 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
DILKNDFD_00320 1.3e-269 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DILKNDFD_00321 4.1e-87 niaX
DILKNDFD_00322 8.6e-90 niaR S small molecule binding protein (contains 3H domain)
DILKNDFD_00323 1.8e-127 K DNA-binding helix-turn-helix protein
DILKNDFD_00324 1.1e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
DILKNDFD_00325 1.4e-136 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DILKNDFD_00326 4.1e-167 GK ROK family
DILKNDFD_00327 9.2e-158 dprA LU DNA protecting protein DprA
DILKNDFD_00328 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
DILKNDFD_00329 3.6e-154 S TraX protein
DILKNDFD_00330 2.2e-122 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
DILKNDFD_00331 2.8e-252 T PhoQ Sensor
DILKNDFD_00332 6.6e-259 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
DILKNDFD_00333 1.4e-152 XK27_05470 E Methionine synthase
DILKNDFD_00334 1.7e-75 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
DILKNDFD_00335 2.7e-48 pspE P Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DILKNDFD_00336 1.8e-51 IQ Acetoin reductase
DILKNDFD_00337 3.9e-19 IQ Acetoin reductase
DILKNDFD_00338 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
DILKNDFD_00339 2e-155 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
DILKNDFD_00342 1.1e-212 pqqE C radical SAM domain protein
DILKNDFD_00343 3.9e-136 speB 3.5.3.11 E hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
DILKNDFD_00344 6.6e-61 EGP Major facilitator Superfamily
DILKNDFD_00345 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
DILKNDFD_00346 3e-133 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
DILKNDFD_00347 1.9e-13
DILKNDFD_00348 6.4e-104 V ABC transporter (Permease
DILKNDFD_00349 2.8e-115 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
DILKNDFD_00350 1.6e-10
DILKNDFD_00351 1.2e-97 K Transcriptional regulator, TetR family
DILKNDFD_00352 1.8e-159 czcD P cation diffusion facilitator family transporter
DILKNDFD_00353 2.7e-210 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
DILKNDFD_00354 6.2e-196 adhB 1.1.1.1, 1.1.1.14 E Dehydrogenase
DILKNDFD_00355 6e-08 S Hydrolases of the alpha beta superfamily
DILKNDFD_00356 7.9e-17 S Alpha/beta hydrolase of unknown function (DUF915)
DILKNDFD_00357 5.9e-79 S Alpha/beta hydrolase of unknown function (DUF915)
DILKNDFD_00360 1.2e-143 2.4.2.3 F Phosphorylase superfamily
DILKNDFD_00361 9.2e-118 gph 3.1.3.18 S HAD hydrolase, family IA, variant 1
DILKNDFD_00362 5.1e-33 yclQ P ABC-type enterochelin transport system, periplasmic component
DILKNDFD_00363 3.6e-18 yclQ P ABC-type enterochelin transport system, periplasmic component
DILKNDFD_00364 8.6e-15 dinF V Mate efflux family protein
DILKNDFD_00366 3e-309 FbpA K RNA-binding protein homologous to eukaryotic snRNP
DILKNDFD_00367 7.1e-209 sip L Belongs to the 'phage' integrase family
DILKNDFD_00368 5.2e-144 V COG4823 Abortive infection bacteriophage resistance protein
DILKNDFD_00369 8.3e-18 K Transcriptional
DILKNDFD_00370 9.5e-21 K Cro/C1-type HTH DNA-binding domain
DILKNDFD_00371 2.3e-100 S Phage regulatory protein Rha (Phage_pRha)
DILKNDFD_00375 9e-22
DILKNDFD_00376 5.7e-131 KL Phage plasmid primase P4 family
DILKNDFD_00377 1.2e-66 S Virulence-associated protein E
DILKNDFD_00378 5.8e-127 S Protein conserved in bacteria
DILKNDFD_00381 1.5e-196 dcm 2.1.1.37 H cytosine-specific methyltransferase
DILKNDFD_00382 1.2e-167 S NgoFVII restriction endonuclease
DILKNDFD_00384 2e-30
DILKNDFD_00386 1.5e-46 S TraX protein
DILKNDFD_00387 8.3e-59 S TraX protein
DILKNDFD_00388 5.9e-97 thiJ 2.7.11.1, 3.5.1.124 S DJ-1 family
DILKNDFD_00389 1.3e-148 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
DILKNDFD_00390 3.2e-175 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
DILKNDFD_00391 1.5e-183 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
DILKNDFD_00392 3.7e-54 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
DILKNDFD_00393 6.8e-133 cas6 S CRISPR-associated endoribonuclease Cas6
DILKNDFD_00394 0.0 csm1 S CRISPR-associated protein Csm1 family
DILKNDFD_00395 2.5e-62 csm2 L Csm2 Type III-A
DILKNDFD_00396 1.6e-117 csm3 L RAMP superfamily
DILKNDFD_00397 2.3e-167 csm4 L CRISPR-associated RAMP protein, Csm4 family
DILKNDFD_00398 2e-205 csm5 L CRISPR-associated RAMP protein, Csm5 family
DILKNDFD_00400 9.5e-32 csm6 S Psort location Cytoplasmic, score
DILKNDFD_00401 7e-127 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
DILKNDFD_00402 7.5e-112 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DILKNDFD_00403 1.6e-266 dtpT E transporter
DILKNDFD_00404 4e-62 yecS P ABC transporter (Permease
DILKNDFD_00405 2.3e-20 yecS P amino acid transport
DILKNDFD_00407 2e-272 sasH 3.1.3.5, 3.6.1.45 F Belongs to the 5'-nucleotidase family
DILKNDFD_00408 9.8e-35 3.1.3.6, 3.1.4.16 F nucleotide catabolic process
DILKNDFD_00409 1.4e-104 yfiF3 K sequence-specific DNA binding
DILKNDFD_00412 1.9e-07
DILKNDFD_00417 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DILKNDFD_00418 1.2e-235 pepS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
DILKNDFD_00419 5.5e-36 XK27_02060 S Transglycosylase associated protein
DILKNDFD_00420 2.6e-55 badR K DNA-binding transcription factor activity
DILKNDFD_00421 3.5e-97 S reductase
DILKNDFD_00422 1.2e-32 L Integrase core domain protein
DILKNDFD_00424 4.7e-174 yocD 3.4.17.13 V proteins, homologs of microcin C7 resistance protein MccF
DILKNDFD_00426 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
DILKNDFD_00427 3e-182 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
DILKNDFD_00428 9.3e-83 S Putative small multi-drug export protein
DILKNDFD_00429 6.2e-76 ctsR K Belongs to the CtsR family
DILKNDFD_00430 0.0 clpC O Belongs to the ClpA ClpB family
DILKNDFD_00431 6.6e-130 dacA 3.4.16.4 M Belongs to the peptidase S11 family
DILKNDFD_00432 3.9e-59 dacA 3.4.16.4 M Belongs to the peptidase S11 family
DILKNDFD_00433 1.4e-231 dacA 3.4.16.4 M Belongs to the peptidase S11 family
DILKNDFD_00434 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
DILKNDFD_00435 2e-143 S SseB protein N-terminal domain
DILKNDFD_00436 1.1e-112 cysE 2.3.1.30 E serine acetyltransferase
DILKNDFD_00437 1.7e-259 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
DILKNDFD_00438 4.2e-68 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
DILKNDFD_00441 5.7e-135 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DILKNDFD_00442 3.5e-91 yacP S RNA-binding protein containing a PIN domain
DILKNDFD_00443 4.4e-155 degV S DegV family
DILKNDFD_00445 1.8e-31 K helix-turn-helix
DILKNDFD_00446 4.7e-182 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
DILKNDFD_00447 2e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
DILKNDFD_00448 9.5e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
DILKNDFD_00449 1.5e-35 K sequence-specific DNA binding
DILKNDFD_00451 0.0 S Lantibiotic dehydratase, C terminus
DILKNDFD_00452 2.4e-231 spaC2 V Lanthionine synthetase C family protein
DILKNDFD_00453 5.6e-183 EGP Major facilitator Superfamily
DILKNDFD_00454 5.9e-24 3.6.4.12
DILKNDFD_00455 5.9e-91 3.6.4.12 K Divergent AAA domain protein
DILKNDFD_00456 8.2e-224 int L Belongs to the 'phage' integrase family
DILKNDFD_00457 1.8e-38 S Helix-turn-helix domain
DILKNDFD_00458 4.9e-173
DILKNDFD_00460 3.4e-75 isp2 S pathogenesis
DILKNDFD_00461 5.7e-91 tnp L Transposase
DILKNDFD_00462 3.3e-225 capA M Bacterial capsule synthesis protein
DILKNDFD_00463 3.6e-39 gcvR T UPF0237 protein
DILKNDFD_00464 1.9e-242 XK27_08635 S UPF0210 protein
DILKNDFD_00465 4.8e-38 ais G alpha-ribazole phosphatase activity
DILKNDFD_00466 1.6e-143 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
DILKNDFD_00467 3.8e-102 acmA 3.2.1.17 NU amidase activity
DILKNDFD_00468 5.3e-198 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
DILKNDFD_00469 1.3e-71 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
DILKNDFD_00470 9.8e-298 dnaK O Heat shock 70 kDa protein
DILKNDFD_00471 4.2e-190 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
DILKNDFD_00472 2.5e-138 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
DILKNDFD_00473 6.2e-137 thiD 2.7.1.35, 2.7.1.49, 2.7.4.7 H phosphomethylpyrimidine kinase
DILKNDFD_00474 1.7e-60 hmpT S membrane
DILKNDFD_00475 1.6e-247 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
DILKNDFD_00476 1.8e-240 agcS E (Alanine) symporter
DILKNDFD_00477 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
DILKNDFD_00478 4.6e-241 metY 2.5.1.49 E o-acetylhomoserine
DILKNDFD_00479 1.8e-31 S haloacid dehalogenase-like hydrolase
DILKNDFD_00480 7.8e-61 S haloacid dehalogenase-like hydrolase
DILKNDFD_00481 1.3e-87 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
DILKNDFD_00482 1.1e-110 hsdS2 2.1.1.72 V Type I restriction modification DNA specificity domain
DILKNDFD_00483 6.3e-32 M1-755 P Hemerythrin HHE cation binding domain protein
DILKNDFD_00484 5.4e-95 XK27_04775 S hemerythrin HHE cation binding domain
DILKNDFD_00485 2.6e-49 XK27_04775 S hemerythrin HHE cation binding domain
DILKNDFD_00486 4.9e-151 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DILKNDFD_00487 5.3e-175 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
DILKNDFD_00488 1.4e-71 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
DILKNDFD_00489 1.9e-43 yktA S Belongs to the UPF0223 family
DILKNDFD_00490 5e-142 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
DILKNDFD_00491 3e-256 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
DILKNDFD_00492 3.3e-158 pstS P phosphate
DILKNDFD_00493 1.8e-154 pstC P probably responsible for the translocation of the substrate across the membrane
DILKNDFD_00494 1.2e-155 pstA P phosphate transport system permease
DILKNDFD_00495 1e-150 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
DILKNDFD_00496 2.3e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
DILKNDFD_00497 2.4e-113 phoU P Plays a role in the regulation of phosphate uptake
DILKNDFD_00498 0.0 pepN 3.4.11.2 E aminopeptidase
DILKNDFD_00499 7e-195 xerS D Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division
DILKNDFD_00500 1.9e-186 lplA 6.3.1.20 H Lipoate-protein ligase
DILKNDFD_00501 3e-08
DILKNDFD_00502 3.6e-09
DILKNDFD_00503 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
DILKNDFD_00504 1.1e-302 malQ 2.4.1.25 GH77 G 4-alpha-glucanotransferase
DILKNDFD_00505 1.3e-48 malR K Transcriptional regulator
DILKNDFD_00506 2.3e-23 L Transposase
DILKNDFD_00507 4.6e-25 tatA U protein secretion
DILKNDFD_00508 5.8e-121 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
DILKNDFD_00509 7.4e-300 ywbL P COG0672 High-affinity Fe2 Pb2 permease
DILKNDFD_00510 5.6e-233 ycdB P peroxidase
DILKNDFD_00511 3.2e-153 ycdO P periplasmic lipoprotein involved in iron transport
DILKNDFD_00512 3e-34 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
DILKNDFD_00513 1.8e-84 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
DILKNDFD_00514 1.7e-60 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
DILKNDFD_00515 1.5e-65 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
DILKNDFD_00516 2.4e-134 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
DILKNDFD_00517 1.9e-37 3.5.1.28 NU amidase activity
DILKNDFD_00518 6.8e-131 3.5.1.28 M GBS Bsp-like repeat
DILKNDFD_00519 2.7e-67 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
DILKNDFD_00520 9.9e-12 3.5.1.28 NU amidase activity
DILKNDFD_00521 0.0 lpdA 1.8.1.4 C Dehydrogenase
DILKNDFD_00522 1e-198 acoC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
DILKNDFD_00523 3.7e-182 acoB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
DILKNDFD_00524 6e-185 acoA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
DILKNDFD_00525 3.6e-46 hpk9 2.7.13.3 T protein histidine kinase activity
DILKNDFD_00526 3.5e-241 cas3 L CRISPR-associated helicase, Cas3
DILKNDFD_00527 0.0 S the current gene model (or a revised gene model) may contain a frame shift
DILKNDFD_00528 9.1e-234 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
DILKNDFD_00529 2.2e-127 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
DILKNDFD_00530 4.3e-217 yeaB K Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
DILKNDFD_00531 2.9e-21 dacA1 3.4.16.4 M Belongs to the peptidase S11 family
DILKNDFD_00532 3.9e-24 3.4.16.4 M Belongs to the peptidase S11 family
DILKNDFD_00533 4.1e-127 3.4.16.4 M Belongs to the peptidase S11 family
DILKNDFD_00534 1.2e-157 rssA S Phospholipase, patatin family
DILKNDFD_00535 1.8e-69 estA E GDSL-like protein
DILKNDFD_00536 3.4e-29 estA E Lysophospholipase L1 and related esterases
DILKNDFD_00537 3.5e-291 S unusual protein kinase
DILKNDFD_00538 4.9e-39 S granule-associated protein
DILKNDFD_00539 2.6e-107 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
DILKNDFD_00540 8.4e-27 bglH 3.2.1.86 GT1 G beta-glucosidase activity
DILKNDFD_00541 1e-196 S hmm pf01594
DILKNDFD_00542 3.9e-102 G Belongs to the phosphoglycerate mutase family
DILKNDFD_00543 5.8e-81 supH 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
DILKNDFD_00544 2.2e-94 V VanZ like family
DILKNDFD_00545 7.7e-103 L Transposase
DILKNDFD_00546 2.8e-111 L Transposase
DILKNDFD_00547 1.4e-192 wbbI M transferase activity, transferring glycosyl groups
DILKNDFD_00548 2e-213 glf 5.4.99.9 M UDP-galactopyranose mutase
DILKNDFD_00549 3.5e-242 epsU S Polysaccharide biosynthesis protein
DILKNDFD_00550 6.3e-173
DILKNDFD_00551 4.4e-159 M Glycosyltransferase like family 2
DILKNDFD_00552 8.3e-126 M Glycosyltransferase, group 2 family protein
DILKNDFD_00553 6.8e-113 Z012_10770 M Domain of unknown function (DUF1919)
DILKNDFD_00554 3.5e-208 wcoF M Glycosyltransferase, group 1 family protein
DILKNDFD_00555 2.2e-218 rgpAc GT4 M group 1 family protein
DILKNDFD_00556 2.6e-250 cpsE M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
DILKNDFD_00557 7.2e-114 cpsD D COG0489 ATPases involved in chromosome partitioning
DILKNDFD_00558 2.7e-107 cps4C M biosynthesis protein
DILKNDFD_00559 2.3e-136 cpsB 3.1.3.48 GM Capsular polysaccharide biosynthesis protein
DILKNDFD_00560 1.5e-251 cps4A K Cell envelope-like function transcriptional attenuator common domain protein
DILKNDFD_00561 9e-130 deoD 2.4.2.1, 2.4.2.28 F purine nucleoside phosphorylase
DILKNDFD_00562 1.5e-119 yfeJ 6.3.5.2 F glutamine amidotransferase
DILKNDFD_00563 1.6e-40 clcA_2 P chloride
DILKNDFD_00564 3.8e-42 clcA_2 P chloride channel
DILKNDFD_00565 5.8e-149 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
DILKNDFD_00566 1.3e-41 S Protein of unknown function (DUF1697)
DILKNDFD_00567 2.9e-237 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
DILKNDFD_00568 5e-122 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
DILKNDFD_00569 1e-21 V Glucan-binding protein C
DILKNDFD_00570 4.5e-111 ung2 3.2.2.27 L Uracil-DNA glycosylase
DILKNDFD_00571 2.4e-275 pepV 3.5.1.18 E Dipeptidase
DILKNDFD_00572 6.4e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
DILKNDFD_00573 3.8e-60 XK27_03610 K Gnat family
DILKNDFD_00574 2.2e-84 L Transposase
DILKNDFD_00575 1.5e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
DILKNDFD_00576 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
DILKNDFD_00577 3.5e-86 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
DILKNDFD_00578 2.5e-121 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
DILKNDFD_00579 3.9e-15 M LysM domain
DILKNDFD_00580 2.9e-90 ebsA S Family of unknown function (DUF5322)
DILKNDFD_00581 1.8e-234 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
DILKNDFD_00582 4.2e-98 lepB 3.4.21.89 U Belongs to the peptidase S26 family
DILKNDFD_00583 3.7e-224 G COG0457 FOG TPR repeat
DILKNDFD_00584 3.1e-175 yubA S permease
DILKNDFD_00585 3.5e-93 mutX 3.6.1.55 F NTP pyrophosphohydrolases including oxidative damage repair enzymes
DILKNDFD_00586 1.1e-162 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
DILKNDFD_00587 2.5e-124 ftsE D cell division ATP-binding protein FtsE
DILKNDFD_00588 1.3e-182 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DILKNDFD_00589 1.2e-202 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
DILKNDFD_00590 1.3e-181 yjjH S Calcineurin-like phosphoesterase
DILKNDFD_00591 5.2e-136 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
DILKNDFD_00592 0.0 pacL 3.6.3.8 P cation transport ATPase
DILKNDFD_00593 2.6e-67 ywiB S Domain of unknown function (DUF1934)
DILKNDFD_00594 6.3e-51 XK27_00115 2.3.1.128 K acetyltransferase
DILKNDFD_00595 9.2e-147 yidA S hydrolases of the HAD superfamily
DILKNDFD_00596 5.3e-231 murM 2.3.2.10, 2.3.2.16 V protein involved in methicillin resistance
DILKNDFD_00597 5e-35 F Protein of unknown function (DUF454)
DILKNDFD_00598 2.1e-154 vicX 3.1.26.11 S Metal-dependent hydrolases of the beta-lactamase superfamily I
DILKNDFD_00599 1.9e-234 vicK 2.7.13.3 T Histidine kinase
DILKNDFD_00600 9.9e-129 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
DILKNDFD_00601 2.1e-140 glnQ 3.6.3.21 E abc transporter atp-binding protein
DILKNDFD_00602 3.1e-150 peb1A ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
DILKNDFD_00603 4.7e-115 gltJ P ABC transporter (Permease
DILKNDFD_00604 4.2e-110 tcyB_2 P ABC transporter (permease)
DILKNDFD_00605 2.4e-124 endA F DNA RNA non-specific endonuclease
DILKNDFD_00606 1.2e-25 epuA S DNA-directed RNA polymerase subunit beta
DILKNDFD_00607 7.2e-231 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DILKNDFD_00609 1.9e-194 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
DILKNDFD_00610 6.4e-20 G Domain of unknown function (DUF4832)
DILKNDFD_00612 2.1e-203 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DILKNDFD_00613 1.7e-173 birA 6.3.4.15 HK Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
DILKNDFD_00614 3.2e-295 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DILKNDFD_00615 1.6e-88 ytsP 1.8.4.14 T GAF domain-containing protein
DILKNDFD_00616 4.2e-164 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
DILKNDFD_00617 2.7e-19 WQ51_02665 S Protein of unknown function (DUF3042)
DILKNDFD_00620 8.5e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
DILKNDFD_00621 3.2e-220 XK27_05110 P chloride
DILKNDFD_00622 8.7e-41 pheA 1.3.1.12, 2.3.1.79, 4.2.1.51, 5.4.99.5 E Chorismate mutase
DILKNDFD_00623 7e-281 clcA P Chloride transporter, ClC family
DILKNDFD_00624 2.3e-75 fld C Flavodoxin
DILKNDFD_00626 4.7e-126 XK27_08875 O Zinc-dependent metalloprotease
DILKNDFD_00627 4.6e-151 estA CE1 S Putative esterase
DILKNDFD_00628 6.6e-309 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DILKNDFD_00629 1.2e-135 XK27_08845 S abc transporter atp-binding protein
DILKNDFD_00630 4e-148 XK27_08840 S Belongs to the binding-protein-dependent transport system permease family
DILKNDFD_00631 9.5e-178 XK27_08835 S ABC transporter substrate binding protein
DILKNDFD_00632 1.6e-16 S Domain of unknown function (DUF4649)
DILKNDFD_00634 1.1e-43 Q the current gene model (or a revised gene model) may contain a frame shift
DILKNDFD_00635 7e-27 Q the current gene model (or a revised gene model) may contain a frame shift
DILKNDFD_00638 9.3e-278 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
DILKNDFD_00639 1.2e-188 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
DILKNDFD_00640 0.0 dnaE 2.7.7.7 L DNA polymerase
DILKNDFD_00641 1.4e-152 sua5 2.7.7.87 J Belongs to the SUA5 family
DILKNDFD_00642 3.1e-112 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
DILKNDFD_00643 6.8e-275 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
DILKNDFD_00644 2.5e-43 ysdA L Membrane
DILKNDFD_00645 6.6e-190 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
DILKNDFD_00646 5.9e-291 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
DILKNDFD_00647 4.6e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DILKNDFD_00648 3.6e-179 pyrD 1.3.1.14, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate
DILKNDFD_00650 2.8e-39 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
DILKNDFD_00651 1.7e-83 ypmS S Protein conserved in bacteria
DILKNDFD_00652 6e-144 ypmR E lipolytic protein G-D-S-L family
DILKNDFD_00653 1e-148 DegV S DegV family
DILKNDFD_00654 5.8e-305 recN L May be involved in recombinational repair of damaged DNA
DILKNDFD_00655 3.7e-73 argR K Regulates arginine biosynthesis genes
DILKNDFD_00656 5e-159 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
DILKNDFD_00657 3e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
DILKNDFD_00658 3.5e-29 xseB 3.1.11.6 L exodeoxyribonuclease VII activity
DILKNDFD_00659 1.2e-247 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DILKNDFD_00662 3.4e-120 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
DILKNDFD_00663 3.8e-125 dnaD
DILKNDFD_00664 9.3e-183 metA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
DILKNDFD_00665 2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DILKNDFD_00666 0.0 recJ L Single-strand DNA-specific exonuclease, C terminal domain
DILKNDFD_00667 6.7e-139 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
DILKNDFD_00668 9.2e-175 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
DILKNDFD_00669 3.9e-116 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
DILKNDFD_00670 1.4e-223 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DILKNDFD_00671 5.4e-197 L transposase, IS4 family
DILKNDFD_00672 5.6e-240 rodA D Belongs to the SEDS family
DILKNDFD_00673 1.8e-50 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP
DILKNDFD_00674 5.5e-61 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
DILKNDFD_00675 9.6e-138 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
DILKNDFD_00676 8.5e-128 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
DILKNDFD_00677 4.7e-111 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
DILKNDFD_00678 2.2e-105 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
DILKNDFD_00679 2.6e-228 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
DILKNDFD_00680 2.3e-116 hisG 2.4.2.17 E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
DILKNDFD_00681 1.4e-181 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
DILKNDFD_00682 2.1e-196 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
DILKNDFD_00684 6.6e-31 L Integrase core domain protein
DILKNDFD_00685 1.3e-22 XK27_08085
DILKNDFD_00686 5e-71 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
DILKNDFD_00687 2.3e-09 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
DILKNDFD_00688 2e-140 hisK 3.1.3.15 E Histidinol phosphatase and related hydrolases of the PHP family
DILKNDFD_00689 1.1e-121 ylfI S tigr01906
DILKNDFD_00690 5.9e-143 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
DILKNDFD_00691 1.5e-143 fat 3.1.2.21 I Acyl-ACP thioesterase
DILKNDFD_00692 4.1e-217 hemN H Involved in the biosynthesis of porphyrin-containing compound
DILKNDFD_00695 1.9e-205 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
DILKNDFD_00696 8.3e-113 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
DILKNDFD_00697 1.9e-161 rfbA 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
DILKNDFD_00698 1.1e-206 yurR 1.4.5.1 E oxidoreductase
DILKNDFD_00699 5.7e-102 zupT P Mediates zinc uptake. May also transport other divalent cations
DILKNDFD_00700 9.6e-149 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
DILKNDFD_00701 2.7e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
DILKNDFD_00702 1.7e-70 gtrA S GtrA-like protein
DILKNDFD_00703 1.5e-250 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DILKNDFD_00704 6e-169 ybbR S Protein conserved in bacteria
DILKNDFD_00705 5.6e-124 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
DILKNDFD_00706 7.5e-255 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain protein
DILKNDFD_00707 8.7e-150 cobQ S glutamine amidotransferase
DILKNDFD_00708 0.0 mprF 2.3.2.3 J Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
DILKNDFD_00709 2.2e-131 pip 1.11.1.10 S Alpha beta hydrolase
DILKNDFD_00710 0.0 uup S abc transporter atp-binding protein
DILKNDFD_00711 2.1e-114 udk 2.7.1.48 F Cytidine monophosphokinase
DILKNDFD_00712 1.9e-176 yfmL 3.6.4.13 L DEAD DEAH box helicase
DILKNDFD_00713 4.8e-28 6.3.2.2, 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
DILKNDFD_00714 8.6e-265 gapN 1.2.1.9 C Belongs to the aldehyde dehydrogenase family
DILKNDFD_00715 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DILKNDFD_00716 7.9e-39 ptsH G phosphocarrier protein Hpr
DILKNDFD_00717 9.7e-222 icd 1.1.1.42 C Isocitrate dehydrogenase
DILKNDFD_00718 1.5e-211 citZ 2.3.3.1 C Belongs to the citrate synthase family
DILKNDFD_00719 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
DILKNDFD_00720 2.2e-34 nrdH O Glutaredoxin
DILKNDFD_00721 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DILKNDFD_00722 1.7e-184 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DILKNDFD_00724 1.7e-72 L Transposase (IS116 IS110 IS902 family)
DILKNDFD_00725 3.6e-61 L Transposase (IS116 IS110 IS902 family)
DILKNDFD_00726 2.4e-165 ypuA S secreted protein
DILKNDFD_00727 8.3e-51 yaeR E COG0346 LactoylglutaTHIone lyase and related lyases
DILKNDFD_00728 1.4e-133 srtA 3.4.22.70 M Sortase (surface protein transpeptidase)
DILKNDFD_00729 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DILKNDFD_00730 1.1e-181 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
DILKNDFD_00731 3.4e-258 noxE P NADH oxidase
DILKNDFD_00732 1.9e-294 yfmM S abc transporter atp-binding protein
DILKNDFD_00733 2.8e-83 XK27_01265 S ECF-type riboflavin transporter, S component
DILKNDFD_00734 8.7e-85 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
DILKNDFD_00735 4.5e-44 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
DILKNDFD_00736 2e-86 S ECF-type riboflavin transporter, S component
DILKNDFD_00738 2.9e-240 XK27_08130 K Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
DILKNDFD_00739 2e-55 nrdD_1 1.1.98.6, 1.17.4.1 F Ribonucleoside-triphosphate reductase
DILKNDFD_00741 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
DILKNDFD_00742 9.9e-94 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
DILKNDFD_00743 1.1e-197 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
DILKNDFD_00744 0.0 smc D Required for chromosome condensation and partitioning
DILKNDFD_00745 8.4e-125 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
DILKNDFD_00746 6.6e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
DILKNDFD_00747 7.3e-200 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
DILKNDFD_00748 2.4e-92 pat 2.3.1.183 M acetyltransferase
DILKNDFD_00749 1.6e-11 L Transposase
DILKNDFD_00750 3.1e-278 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DILKNDFD_00751 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
DILKNDFD_00752 3.1e-127 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 E hydrolase
DILKNDFD_00753 1.2e-62 bioY S biotin transmembrane transporter activity
DILKNDFD_00754 2e-88 proW P Binding-protein-dependent transport system inner membrane component
DILKNDFD_00755 1.6e-137 proV E abc transporter atp-binding protein
DILKNDFD_00756 2.9e-165 proX M ABC transporter, substrate-binding protein, QAT family
DILKNDFD_00757 3e-111 proWZ P ABC transporter (Permease
DILKNDFD_00758 1.2e-280 hutH 4.3.1.3 E Histidine ammonia-lyase
DILKNDFD_00759 1.6e-205 S Protein of unknown function (DUF917)
DILKNDFD_00760 5e-309 hutU 4.2.1.49 E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
DILKNDFD_00761 1.6e-59 sdaAB 4.3.1.17 E L-serine dehydratase
DILKNDFD_00762 4.4e-101 desR K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
DILKNDFD_00763 1.5e-192 desK 2.7.13.3 T Histidine kinase
DILKNDFD_00764 2.6e-132 yvfS V ABC-2 type transporter
DILKNDFD_00765 8.7e-159 XK27_09825 V abc transporter atp-binding protein
DILKNDFD_00769 1.5e-212 EGP Major facilitator Superfamily
DILKNDFD_00770 0.0 2.7.7.73, 2.7.7.80 E metalloendopeptidase activity
DILKNDFD_00771 1.6e-152 mutR K Transcriptional activator, Rgg GadR MutR family
DILKNDFD_00772 4.6e-42 3.6.1.55 F NUDIX domain
DILKNDFD_00774 3.7e-122 S An automated process has identified a potential problem with this gene model
DILKNDFD_00775 1.9e-24 XK27_09825 V 'abc transporter, ATP-binding protein
DILKNDFD_00776 1.4e-15 liaI KT membrane
DILKNDFD_00777 2.6e-30 liaI KT membrane
DILKNDFD_00778 6e-99 XK27_05000 S Fe-S-cluster oxidoreductase
DILKNDFD_00779 0.0 V ABC transporter (permease)
DILKNDFD_00780 1.9e-133 macB2 V ABC transporter, ATP-binding protein
DILKNDFD_00781 6.2e-166 T Histidine kinase
DILKNDFD_00782 4.6e-123 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
DILKNDFD_00783 2e-77 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
DILKNDFD_00784 3.3e-69 pbuX F xanthine permease
DILKNDFD_00785 7.8e-118 pbuX F xanthine permease
DILKNDFD_00786 1.5e-247 norM V Multidrug efflux pump
DILKNDFD_00787 9.7e-188 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DILKNDFD_00788 4.3e-234 brnQ E Component of the transport system for branched-chain amino acids
DILKNDFD_00789 2.9e-66 manA 5.3.1.8 G mannose-6-phosphate isomerase
DILKNDFD_00790 2.8e-57 manA 5.3.1.8 G mannose-6-phosphate isomerase
DILKNDFD_00791 9.6e-26 csbD K CsbD-like
DILKNDFD_00792 1.5e-245 yfnA E amino acid
DILKNDFD_00793 2.2e-108 XK27_02070 S nitroreductase
DILKNDFD_00794 9.5e-150 1.13.11.2 S glyoxalase
DILKNDFD_00795 5.6e-77 ywnA K Transcriptional regulator
DILKNDFD_00796 9.5e-158 E Alpha/beta hydrolase of unknown function (DUF915)
DILKNDFD_00797 1.9e-231 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DILKNDFD_00798 1.4e-110 drgA C Nitroreductase
DILKNDFD_00799 3e-102 yoaK S Protein of unknown function (DUF1275)
DILKNDFD_00801 6.8e-161 yvgN C reductase
DILKNDFD_00802 5.7e-180 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
DILKNDFD_00803 3.6e-282 XK27_07020 S Belongs to the UPF0371 family
DILKNDFD_00805 1.1e-37 BP1961 P nitric oxide dioxygenase activity
DILKNDFD_00806 1.4e-54 K response regulator
DILKNDFD_00807 1.3e-70 S Signal peptide protein, YSIRK family
DILKNDFD_00809 3.2e-59
DILKNDFD_00810 1.8e-267 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DILKNDFD_00811 1.9e-35
DILKNDFD_00812 5.3e-12 IQ PFAM AMP-dependent synthetase and ligase
DILKNDFD_00813 2.7e-12 IQ PFAM AMP-dependent synthetase and ligase
DILKNDFD_00814 5.8e-109 MA20_06410 E LysE type translocator
DILKNDFD_00815 5.6e-08
DILKNDFD_00816 2.7e-09
DILKNDFD_00817 0.0 M family 8
DILKNDFD_00819 1.1e-151 V MatE
DILKNDFD_00821 7.3e-74 C Fe-S oxidoreductases
DILKNDFD_00822 1.5e-27 C Fe-S oxidoreductases
DILKNDFD_00823 1.2e-176 EGP Major Facilitator Superfamily
DILKNDFD_00824 1.6e-257 I radical SAM domain protein
DILKNDFD_00826 6.5e-159 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
DILKNDFD_00827 1.4e-150 L Integrase core domain protein
DILKNDFD_00828 1.8e-87 L transposase activity
DILKNDFD_00830 2.8e-85
DILKNDFD_00831 0.0 sbcC L ATPase involved in DNA repair
DILKNDFD_00832 6.9e-231 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
DILKNDFD_00833 0.0 lacL 3.2.1.23 G -beta-galactosidase
DILKNDFD_00834 0.0 lacS G transporter
DILKNDFD_00835 2.6e-202 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
DILKNDFD_00836 6.6e-195 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
DILKNDFD_00837 8e-290 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
DILKNDFD_00838 4.8e-221 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
DILKNDFD_00839 3.4e-183 galR K Transcriptional regulator
DILKNDFD_00840 2.7e-08 L Integrase core domain protein
DILKNDFD_00841 1.2e-25 L transposition
DILKNDFD_00842 1.6e-103 M translation initiation factor activity
DILKNDFD_00843 5.7e-90 zmpB M M26 IgA1-specific Metallo-endopeptidase C-terminal region
DILKNDFD_00844 6.7e-17 rtxA M M26 IgA1-specific Metallo-endopeptidase C-terminal region
DILKNDFD_00845 5.5e-101 V abc transporter atp-binding protein
DILKNDFD_00846 2.5e-40 V (ABC) transporter
DILKNDFD_00847 0.0 gshF 6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
DILKNDFD_00848 2.3e-87 L Transposase
DILKNDFD_00849 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
DILKNDFD_00850 1.6e-188 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
DILKNDFD_00851 1.4e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
DILKNDFD_00852 5.8e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
DILKNDFD_00855 2.2e-114 vraR K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
DILKNDFD_00856 5.8e-175 vraS 2.7.13.3 T Histidine kinase
DILKNDFD_00857 3.7e-120 yvqF KT membrane
DILKNDFD_00858 1.8e-307 prkC 2.7.11.1 KLT serine threonine protein kinase
DILKNDFD_00859 9.9e-132 stp 3.1.3.16 T phosphatase
DILKNDFD_00860 4.4e-247 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DILKNDFD_00861 2.5e-172 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DILKNDFD_00862 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DILKNDFD_00863 2.7e-46 rpoZ 2.7.7.6 K DNA-directed 5'-3' RNA polymerase activity
DILKNDFD_00864 9.8e-112 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
DILKNDFD_00865 2.8e-212 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
DILKNDFD_00866 5.3e-150 XK27_02985 S overlaps another CDS with the same product name
DILKNDFD_00867 2.1e-148 supH S overlaps another CDS with the same product name
DILKNDFD_00868 8.6e-63 yvoA_1 K Transcriptional
DILKNDFD_00869 4.9e-120 skfE V abc transporter atp-binding protein
DILKNDFD_00870 6.2e-132 V ATPase activity
DILKNDFD_00871 1.2e-171 oppF P Belongs to the ABC transporter superfamily
DILKNDFD_00872 8.4e-204 oppD P Belongs to the ABC transporter superfamily
DILKNDFD_00873 3.1e-167 amiD P ABC transporter (Permease
DILKNDFD_00874 2.5e-267 amiC P ABC transporter (Permease
DILKNDFD_00875 0.0 amiA E ABC transporter, substrate-binding protein, family 5
DILKNDFD_00876 1.6e-24 oppF P Belongs to the ABC transporter superfamily
DILKNDFD_00877 5e-45 oppF P Belongs to the ABC transporter superfamily
DILKNDFD_00878 1.4e-40 tatD L Hydrolase, tatd
DILKNDFD_00879 6.7e-218 oxlT P COG0477 Permeases of the major facilitator superfamily
DILKNDFD_00880 1e-110 L Integrase core domain protein
DILKNDFD_00881 3.2e-79 L Transposase
DILKNDFD_00882 4.5e-180 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
DILKNDFD_00883 2.8e-173 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
DILKNDFD_00884 1.2e-149 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DILKNDFD_00885 5.5e-121 yjbM 2.7.6.5 S Gtp pyrophosphokinase
DILKNDFD_00886 1.5e-103 yjbK S Adenylate cyclase
DILKNDFD_00887 2.1e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DILKNDFD_00888 7e-206 iscS 2.8.1.7 E Cysteine desulfurase
DILKNDFD_00889 2e-58 XK27_04120 S Putative amino acid metabolism
DILKNDFD_00890 8.2e-117 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
DILKNDFD_00891 1.6e-131 puuD T peptidase C26
DILKNDFD_00892 5.3e-119 radC E Belongs to the UPF0758 family
DILKNDFD_00893 0.0 rgpF M Rhamnan synthesis protein F
DILKNDFD_00894 8.2e-196 rgpEc GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
DILKNDFD_00895 8.7e-226 rgpD 3.6.3.38 P Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
DILKNDFD_00896 2.8e-143 rgpC GM Transport permease protein
DILKNDFD_00897 2.2e-179 rgpB GT2 M Glycosyltransferase, group 2 family protein
DILKNDFD_00898 1.3e-226 rgpA GT4 M Domain of unknown function (DUF1972)
DILKNDFD_00899 3.5e-127 tagF 2.7.8.12 M Glycosyl transferase, family 2
DILKNDFD_00900 1.9e-215 amrA S polysaccharide biosynthetic process
DILKNDFD_00901 1.5e-47 XK27_09090 S Uncharacterized conserved protein (DUF2304)
DILKNDFD_00902 1.9e-124 ycbB S Glycosyl transferase family 2
DILKNDFD_00903 1.5e-160 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
DILKNDFD_00904 1.1e-245
DILKNDFD_00905 1.6e-171 yfdH GT2 M COG0463, glycosyltransferases involved in cell wall biogenesis
DILKNDFD_00906 1.4e-251 M Psort location CytoplasmicMembrane, score
DILKNDFD_00907 3.4e-55 yitW K metal-sulfur cluster biosynthetic enzyme
DILKNDFD_00908 1.1e-201 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
DILKNDFD_00909 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
DILKNDFD_00910 1.6e-19 rpsU J Belongs to the bacterial ribosomal protein bS21 family
DILKNDFD_00911 1.6e-135 gltS ET Belongs to the bacterial solute-binding protein 3 family
DILKNDFD_00912 1.4e-201 arcT 2.6.1.1 E Aminotransferase
DILKNDFD_00913 2.5e-136 ET ABC transporter
DILKNDFD_00914 3.7e-143 ET Belongs to the bacterial solute-binding protein 3 family
DILKNDFD_00915 2.9e-84 mutT 3.6.1.55 F Nudix family
DILKNDFD_00916 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
DILKNDFD_00918 5.1e-74 S CAAX amino terminal protease family protein
DILKNDFD_00919 2.4e-33 S CAAX amino terminal protease family protein
DILKNDFD_00920 0.0 glnP P ABC-type amino acid transport signal transduction systems periplasmic component domain
DILKNDFD_00921 1e-136 glnQ 3.6.3.21 E abc transporter atp-binding protein
DILKNDFD_00922 2.4e-16 XK27_00735
DILKNDFD_00923 1.4e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
DILKNDFD_00925 7.3e-135 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
DILKNDFD_00928 5.5e-65 paaI Q protein possibly involved in aromatic compounds catabolism
DILKNDFD_00929 3e-37 ycaO O OsmC-like protein
DILKNDFD_00931 1.7e-154 EG Permeases of the drug metabolite transporter (DMT) superfamily
DILKNDFD_00933 5.6e-110 csn2 S CRISPR-associated protein (Cas_Csn2)
DILKNDFD_00934 7.8e-52 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
DILKNDFD_00935 5.4e-161 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
DILKNDFD_00936 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
DILKNDFD_00937 6.7e-116 serB 3.1.3.3 E phosphoserine phosphatase
DILKNDFD_00938 3.2e-298 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
DILKNDFD_00939 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
DILKNDFD_00940 2.8e-108 3.1.3.18 S IA, variant 1
DILKNDFD_00941 2.2e-117 lrgB M effector of murein hydrolase
DILKNDFD_00942 1.7e-55 lrgA S Effector of murein hydrolase LrgA
DILKNDFD_00944 6.4e-60 arsC 1.20.4.1 P Belongs to the ArsC family
DILKNDFD_00945 3.1e-56 ogt 2.1.1.63, 3.2.2.20 L methylated-DNA-[protein]-cysteine S-methyltransferase activity
DILKNDFD_00946 7e-220 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DILKNDFD_00947 1.9e-103 wecD M Acetyltransferase GNAT family
DILKNDFD_00948 8.8e-209 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
DILKNDFD_00949 2.7e-97 GK ROK family
DILKNDFD_00950 8.1e-72 gloA 4.4.1.5 E Lactoylglutathione lyase
DILKNDFD_00951 1.7e-47 XK27_08050 O stress-induced mitochondrial fusion
DILKNDFD_00952 1.3e-19 XK27_08050 O HflC and HflK could regulate a protease
DILKNDFD_00953 2.3e-206 potD P spermidine putrescine ABC transporter
DILKNDFD_00954 3e-134 potC P ABC-type spermidine putrescine transport system, permease component II
DILKNDFD_00955 3.7e-140 potB P ABC-type spermidine putrescine transport system, permease component I
DILKNDFD_00956 1.2e-213 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
DILKNDFD_00957 7.8e-171 murB 1.3.1.98 M cell wall formation
DILKNDFD_00958 2.9e-87 folK 2.7.6.3, 4.1.2.25 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
DILKNDFD_00959 1.2e-61 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
DILKNDFD_00960 1.2e-298 amy 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
DILKNDFD_00961 7e-147 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
DILKNDFD_00962 1e-99 folE 3.5.4.16 F gtp cyclohydrolase
DILKNDFD_00963 0.0 ydaO E amino acid
DILKNDFD_00964 5.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
DILKNDFD_00965 4.1e-37 ylqC L Belongs to the UPF0109 family
DILKNDFD_00966 2.4e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
DILKNDFD_00967 2e-171 tehB 2.1.1.265 PQ tellurite resistance protein tehb
DILKNDFD_00968 2.6e-157 xth 3.1.11.2 L exodeoxyribonuclease III
DILKNDFD_00969 2.1e-74 S QueT transporter
DILKNDFD_00970 1.2e-89 ribD 1.1.1.193, 3.5.4.26 L Transposase DDE domain
DILKNDFD_00971 5.7e-186 yegS 2.7.1.107 I Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
DILKNDFD_00972 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
DILKNDFD_00973 3.7e-85 ccl S cog cog4708
DILKNDFD_00974 7.4e-164 rbn E Belongs to the UPF0761 family
DILKNDFD_00975 1.5e-166 map 3.4.11.18 E Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed
DILKNDFD_00976 3.3e-231 ytoI K transcriptional regulator containing CBS domains
DILKNDFD_00977 2.4e-98 XK27_07830 2.3.1.128 J Acetyltransferase GNAT Family
DILKNDFD_00978 1e-232 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DILKNDFD_00979 0.0 comEC S Competence protein ComEC
DILKNDFD_00980 7.5e-97 comEA L COG1555 DNA uptake protein and related DNA-binding proteins
DILKNDFD_00981 1.1e-140 Z012_04635 K Helix-turn-helix XRE-family like proteins
DILKNDFD_00983 2.7e-112 C 4Fe-4S single cluster domain
DILKNDFD_00984 2.5e-139 C Iron-sulfur cluster-binding domain
DILKNDFD_00986 4.1e-156 V AAA domain, putative AbiEii toxin, Type IV TA system
DILKNDFD_00987 8.9e-56 V ABC-2 type transporter
DILKNDFD_00988 2.8e-97
DILKNDFD_00989 1.1e-23
DILKNDFD_00990 1.9e-141 plsC 2.3.1.51 I Acyltransferase
DILKNDFD_00991 5.4e-79 nodB3 G polysaccharide deacetylase
DILKNDFD_00992 5.9e-48 nodB3 G polysaccharide deacetylase
DILKNDFD_00993 2.7e-140 yabB 2.1.1.223 L Methyltransferase
DILKNDFD_00994 1e-41 yazA L endonuclease containing a URI domain
DILKNDFD_00995 1.3e-237 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
DILKNDFD_00996 6.7e-154 corA P CorA-like protein
DILKNDFD_00997 2.5e-62 yjqA S Bacterial PH domain
DILKNDFD_00998 5.6e-98 thiT S Thiamine transporter
DILKNDFD_00999 5.7e-155 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
DILKNDFD_01000 2.7e-200 yjbB G Permeases of the major facilitator superfamily
DILKNDFD_01001 3.1e-300 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
DILKNDFD_01002 1.4e-121 ywaF S Integral membrane protein (intg_mem_TP0381)
DILKNDFD_01003 1.5e-258 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
DILKNDFD_01007 1.1e-155 cjaA ET ABC transporter substrate-binding protein
DILKNDFD_01008 1.4e-136 glnQ 3.6.3.21 E abc transporter atp-binding protein
DILKNDFD_01009 1.3e-114 P ABC transporter (Permease
DILKNDFD_01010 6.6e-114 papP P ABC transporter (Permease
DILKNDFD_01011 1.9e-192 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
DILKNDFD_01012 4.7e-31 copZ 2.7.7.77 P Heavy metal-associated domain protein
DILKNDFD_01013 0.0 copA 3.6.3.54 P P-type ATPase
DILKNDFD_01014 2.7e-73 copY K Copper transport repressor, CopY TcrY family
DILKNDFD_01015 4.6e-143 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
DILKNDFD_01016 5.8e-230 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
DILKNDFD_01017 5.5e-101 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E belongs to the TrpF family
DILKNDFD_01018 8.5e-134 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
DILKNDFD_01019 1.3e-179 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
DILKNDFD_01020 3.6e-105 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH anthranilate
DILKNDFD_01021 6.9e-256 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
DILKNDFD_01022 3.7e-42 pchB 2.5.1.19, 4.2.1.10, 4.2.99.21, 5.4.99.5 E Chorismate mutase
DILKNDFD_01023 1.4e-54
DILKNDFD_01024 0.0 ctpE P E1-E2 ATPase
DILKNDFD_01025 3.9e-26
DILKNDFD_01026 7e-32 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
DILKNDFD_01027 3.3e-46 L transposase activity
DILKNDFD_01028 9.2e-122 K transcriptional regulator, MerR family
DILKNDFD_01029 1.4e-104 dnaQ 2.7.7.7 L DNA polymerase III
DILKNDFD_01030 1.2e-41 WQ51_02910 S Protein of unknown function, DUF536
DILKNDFD_01031 1.6e-63 XK27_02560 S cog cog2151
DILKNDFD_01032 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
DILKNDFD_01033 7.7e-227 ytfP S Flavoprotein
DILKNDFD_01035 3.1e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
DILKNDFD_01036 1.2e-151 ytmP 2.7.1.89 M Phosphotransferase
DILKNDFD_01037 2.7e-183 ecsB U ABC transporter
DILKNDFD_01038 2.3e-133 ecsA V abc transporter atp-binding protein
DILKNDFD_01039 3.9e-72 hit FG Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
DILKNDFD_01040 2.3e-10
DILKNDFD_01041 2.7e-57 S CD20-like family
DILKNDFD_01042 4.7e-106
DILKNDFD_01043 0.0 clpL O ATP-dependent Clp protease ATP-binding subunit
DILKNDFD_01044 6.9e-206 ylbM S Belongs to the UPF0348 family
DILKNDFD_01045 2e-140 yqeM Q Methyltransferase domain protein
DILKNDFD_01046 3e-57 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
DILKNDFD_01047 1.4e-107 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
DILKNDFD_01048 3.1e-118 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
DILKNDFD_01049 3.5e-49 yhbY J RNA-binding protein
DILKNDFD_01050 1.7e-215 yqeH S in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
DILKNDFD_01051 1.8e-98 yqeG S hydrolase of the HAD superfamily
DILKNDFD_01052 3.7e-152 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
DILKNDFD_01053 6.2e-51
DILKNDFD_01054 2.3e-273 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DILKNDFD_01055 3.5e-269 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
DILKNDFD_01056 1.4e-47 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DILKNDFD_01057 6.3e-31 M lipopolysaccharide 3-alpha-galactosyltransferase activity
DILKNDFD_01058 1e-148 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
DILKNDFD_01059 4.3e-97 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
DILKNDFD_01060 1.4e-86 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DILKNDFD_01061 3.7e-154 hlpA M Belongs to the NlpA lipoprotein family
DILKNDFD_01062 6.8e-101 pncA Q isochorismatase
DILKNDFD_01063 1.2e-140 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
DILKNDFD_01064 3.7e-240 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase
DILKNDFD_01065 2.4e-75 XK27_03180 T universal stress protein
DILKNDFD_01068 2e-157 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DILKNDFD_01069 2e-239 hlyX S COG1253 Hemolysins and related proteins containing CBS domains
DILKNDFD_01070 4.6e-143 modF 3.6.3.21, 3.6.3.34 P abc transporter atp-binding protein
DILKNDFD_01071 0.0 yjcE P NhaP-type Na H and K H antiporters
DILKNDFD_01073 1.8e-98 ytqB 2.1.1.176 J (SAM)-dependent
DILKNDFD_01074 1.3e-184 yhcC S radical SAM protein
DILKNDFD_01075 2.2e-196 ylbL T Belongs to the peptidase S16 family
DILKNDFD_01076 5.9e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
DILKNDFD_01077 5.1e-93 rsmD 2.1.1.171 L Methyltransferase
DILKNDFD_01078 1.9e-172 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
DILKNDFD_01079 1.9e-09 S Protein of unknown function (DUF4059)
DILKNDFD_01080 4.5e-132 tcyN 3.6.3.21 E abc transporter atp-binding protein
DILKNDFD_01081 1e-162 yxeN P ABC transporter (Permease
DILKNDFD_01082 1.5e-152 yxeM ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
DILKNDFD_01084 3.1e-206 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DILKNDFD_01085 0.0 pflB 2.3.1.54 C formate acetyltransferase'
DILKNDFD_01086 1.8e-147 cah 4.2.1.1 P carbonic anhydrase
DILKNDFD_01087 2.1e-85 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
DILKNDFD_01088 1e-44 hsdS_1 3.1.21.3 V type I restriction modification DNA specificity domain
DILKNDFD_01089 2.9e-87 D nuclear chromosome segregation
DILKNDFD_01090 4.4e-127 ybbM S transport system, permease component
DILKNDFD_01091 2.1e-117 ybbL S abc transporter atp-binding protein
DILKNDFD_01092 4.5e-185 ampC V COG1680 Beta-lactamase class C and other penicillin binding proteins
DILKNDFD_01093 4.6e-140 cppA E CppA N-terminal
DILKNDFD_01094 5e-44 V CAAX protease self-immunity
DILKNDFD_01095 2.3e-164 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
DILKNDFD_01096 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
DILKNDFD_01099 3e-47 spiA K sequence-specific DNA binding
DILKNDFD_01100 2.9e-28 blpT
DILKNDFD_01101 6.7e-98 blpT
DILKNDFD_01108 6.7e-26 S Bacteriocin class II with double-glycine leader peptide
DILKNDFD_01112 2.1e-134 agrA KT phosphorelay signal transduction system
DILKNDFD_01113 1.4e-237 blpH 2.7.13.3 T protein histidine kinase activity
DILKNDFD_01115 7.3e-237 mesE M Transport protein ComB
DILKNDFD_01116 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
DILKNDFD_01117 0.0 mdlB V abc transporter atp-binding protein
DILKNDFD_01118 0.0 mdlA V abc transporter atp-binding protein
DILKNDFD_01120 1.7e-93 XK27_09885 V Glycopeptide antibiotics resistance protein
DILKNDFD_01121 3e-223 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
DILKNDFD_01122 2.4e-66 yutD J protein conserved in bacteria
DILKNDFD_01123 6.7e-270 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
DILKNDFD_01125 1.4e-221 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
DILKNDFD_01126 6.3e-185 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DILKNDFD_01127 0.0 ftsI 3.4.16.4 M penicillin-binding protein
DILKNDFD_01128 4.3e-47 ftsL D cell division protein FtsL
DILKNDFD_01129 3e-157 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
DILKNDFD_01130 1.6e-65
DILKNDFD_01131 7.4e-27
DILKNDFD_01132 7.5e-30
DILKNDFD_01134 8.7e-33 yhaI J Protein of unknown function (DUF805)
DILKNDFD_01135 1.3e-08 D nuclear chromosome segregation
DILKNDFD_01136 2e-225 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
DILKNDFD_01137 1.7e-140 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
DILKNDFD_01138 2.6e-286 XK27_00765
DILKNDFD_01139 8.1e-134 ecsA_2 V abc transporter atp-binding protein
DILKNDFD_01140 5.2e-125 S Protein of unknown function (DUF554)
DILKNDFD_01141 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
DILKNDFD_01142 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
DILKNDFD_01143 5.7e-121 liaI S membrane
DILKNDFD_01144 1.2e-74 XK27_02470 K LytTr DNA-binding domain
DILKNDFD_01145 7e-70 KT response to antibiotic
DILKNDFD_01146 2.6e-80 yebC M Membrane
DILKNDFD_01147 2.9e-18 yebC M Membrane
DILKNDFD_01148 4.3e-261 XK27_03190 5.2.1.8 S hydrolases of the HAD superfamily
DILKNDFD_01149 8.5e-173 ansA 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
DILKNDFD_01150 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DILKNDFD_01151 7.5e-184 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DILKNDFD_01152 4.1e-62 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
DILKNDFD_01153 1.1e-197 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DILKNDFD_01154 3.8e-198 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
DILKNDFD_01155 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
DILKNDFD_01157 3e-189 manA 5.3.1.8 G mannose-6-phosphate isomerase
DILKNDFD_01158 1.6e-171 scrK 2.7.1.2, 2.7.1.4 GK Fructokinase
DILKNDFD_01159 0.0 scrA 2.7.1.211 G pts system
DILKNDFD_01160 5.4e-291 scrB 3.2.1.26 GH32 G invertase
DILKNDFD_01161 7.5e-180 scrR K Transcriptional
DILKNDFD_01162 2.1e-73 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DILKNDFD_01163 3.4e-62 yqhY S protein conserved in bacteria
DILKNDFD_01164 1.2e-97 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DILKNDFD_01165 3.7e-84 comEB 3.5.4.12 F ComE operon protein 2
DILKNDFD_01166 5e-193 pepP 3.4.11.9, 3.4.13.9 E Belongs to the peptidase M24B family
DILKNDFD_01168 1.4e-43 V 'abc transporter, ATP-binding protein
DILKNDFD_01169 1e-58 V 'abc transporter, ATP-binding protein
DILKNDFD_01172 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
DILKNDFD_01173 2e-169 corA P COG0598 Mg2 and Co2 transporters
DILKNDFD_01174 3.1e-124 XK27_01040 S Pfam PF06570
DILKNDFD_01176 9.7e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
DILKNDFD_01177 2.7e-91 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
DILKNDFD_01178 3.9e-47 rpsF J Binds together with S18 to 16S ribosomal RNA
DILKNDFD_01179 3.6e-41 XK27_05745
DILKNDFD_01180 2.5e-230 mutY L A G-specific adenine glycosylase
DILKNDFD_01187 0.0 spoVK O stage V sporulation protein K
DILKNDFD_01189 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DILKNDFD_01190 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
DILKNDFD_01191 1e-93 cvpA S toxin biosynthetic process
DILKNDFD_01192 2.3e-13 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
DILKNDFD_01193 4.7e-160 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DILKNDFD_01194 1.3e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
DILKNDFD_01195 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
DILKNDFD_01196 2e-47 azlD E branched-chain amino acid
DILKNDFD_01197 1.8e-114 azlC E AzlC protein
DILKNDFD_01198 1.9e-186 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
DILKNDFD_01199 4.8e-73 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
DILKNDFD_01200 5.6e-121 yeaZ 2.3.1.234 O COG1214, inactive homolog of metal-dependent proteases
DILKNDFD_01201 2.5e-33 ykzG S Belongs to the UPF0356 family
DILKNDFD_01202 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DILKNDFD_01203 2.7e-40 pscB M CHAP domain protein
DILKNDFD_01204 1.5e-263 glnA 6.3.1.2 E glutamine synthetase
DILKNDFD_01205 8.5e-63 glnR K Transcriptional regulator
DILKNDFD_01206 1.3e-87 S Fusaric acid resistance protein-like
DILKNDFD_01207 3e-13
DILKNDFD_01208 2e-222 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
DILKNDFD_01209 3.2e-42 L Transposase
DILKNDFD_01210 1e-187 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
DILKNDFD_01211 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DILKNDFD_01212 6.7e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
DILKNDFD_01213 2.3e-69 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
DILKNDFD_01214 1.1e-142 purR 2.4.2.7 F operon repressor
DILKNDFD_01215 3.6e-179 cbf S 3'-5' exoribonuclease yhaM
DILKNDFD_01216 6.9e-173 rmuC S RmuC domain protein
DILKNDFD_01217 3.1e-118 thiN 2.7.6.2 H thiamine pyrophosphokinase
DILKNDFD_01218 1.1e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
DILKNDFD_01219 1.3e-162 rsgA 3.1.3.100 G One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
DILKNDFD_01221 8.9e-156 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
DILKNDFD_01222 3.2e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DILKNDFD_01223 4.1e-144 tatD L Hydrolase, tatd
DILKNDFD_01224 7.2e-74 yccU S CoA-binding protein
DILKNDFD_01225 4.8e-51 trxA O Belongs to the thioredoxin family
DILKNDFD_01226 1.9e-141 S Macro domain protein
DILKNDFD_01227 2e-09 L thioesterase
DILKNDFD_01228 1.3e-54 bta 1.8.1.8 CO cell redox homeostasis
DILKNDFD_01230 1.7e-226 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
DILKNDFD_01231 2.3e-33 L Transposase
DILKNDFD_01232 1e-13 rpmH J Ribosomal protein L34
DILKNDFD_01233 7.6e-186 jag S RNA-binding protein
DILKNDFD_01234 8.5e-141 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
DILKNDFD_01235 1.3e-54 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
DILKNDFD_01236 1.9e-264 argH 4.3.2.1 E Argininosuccinate lyase
DILKNDFD_01237 2e-230 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
DILKNDFD_01238 6e-282 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DILKNDFD_01239 2e-20 amiA E ABC transporter, substrate-binding protein, family 5
DILKNDFD_01240 6.6e-63 amiA E transmembrane transport
DILKNDFD_01241 4.2e-74 amiA E transmembrane transport
DILKNDFD_01242 4.8e-120 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
DILKNDFD_01243 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
DILKNDFD_01244 9.2e-51 S Protein of unknown function (DUF3397)
DILKNDFD_01245 2e-88 cah 4.2.1.1 P Reversible hydration of carbon dioxide
DILKNDFD_01246 9.3e-34 WQ51_05710 S Mitochondrial biogenesis AIM24
DILKNDFD_01247 6.8e-32 WQ51_05710 S Mitochondrial biogenesis AIM24
DILKNDFD_01248 6.2e-12 WQ51_05710 S Mitochondrial biogenesis AIM24
DILKNDFD_01249 1.4e-226 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DILKNDFD_01250 1.1e-80 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
DILKNDFD_01251 4.7e-20 XK27_09620 S FMN reductase (NADPH) activity
DILKNDFD_01252 4.3e-77 XK27_09620 S reductase
DILKNDFD_01253 2.1e-32 XK27_09615 S FMN reductase (NADPH) activity
DILKNDFD_01254 3.7e-116 XK27_09615 C reductase
DILKNDFD_01255 3.2e-62 fnt P Formate nitrite transporter
DILKNDFD_01256 5.5e-64 XK27_08585 S Psort location CytoplasmicMembrane, score
DILKNDFD_01257 2e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
DILKNDFD_01258 5.1e-170 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
DILKNDFD_01259 1.2e-165 L integrase core domain
DILKNDFD_01260 1.1e-121 L Transposase
DILKNDFD_01261 5.2e-119 gluP 3.4.21.105 O membrane protein (homolog of Drosophila rhomboid)
DILKNDFD_01262 9.1e-95 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DILKNDFD_01263 1.3e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
DILKNDFD_01264 8.1e-59 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
DILKNDFD_01265 1.6e-21 S glycolate biosynthetic process
DILKNDFD_01266 3.8e-60 S phosphatase activity
DILKNDFD_01267 3.5e-157 rrmA 2.1.1.187 Q methyltransferase
DILKNDFD_01270 2.7e-91 tadA 3.5.4.1, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
DILKNDFD_01271 5.1e-66 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
DILKNDFD_01272 6.4e-37 yeeD O sulfur carrier activity
DILKNDFD_01273 1.3e-190 yeeE S Sulphur transport
DILKNDFD_01274 7.9e-114 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
DILKNDFD_01275 4.2e-55 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
DILKNDFD_01276 3.2e-09 S Domain of unknown function (DUF4651)
DILKNDFD_01277 2e-205 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
DILKNDFD_01278 3.9e-131 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
DILKNDFD_01279 1.8e-111 S CAAX amino terminal protease family protein
DILKNDFD_01281 7.2e-66 V CAAX protease self-immunity
DILKNDFD_01282 2.3e-33 V CAAX protease self-immunity
DILKNDFD_01283 2.6e-26 lanR K sequence-specific DNA binding
DILKNDFD_01284 1.1e-220 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DILKNDFD_01285 5.9e-177 ytxK 2.1.1.72 L DNA methylase
DILKNDFD_01286 6.8e-13 comGF U Putative Competence protein ComGF
DILKNDFD_01287 1.1e-69 comGF U Competence protein ComGF
DILKNDFD_01288 4.1e-15 NU Type II secretory pathway pseudopilin
DILKNDFD_01289 4e-57 cglD NU Competence protein
DILKNDFD_01290 8.5e-43 comGC U Required for transformation and DNA binding
DILKNDFD_01291 3e-145 cglB NU type II secretion system
DILKNDFD_01292 2.2e-176 comGA NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
DILKNDFD_01293 1e-68 S cog cog4699
DILKNDFD_01294 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DILKNDFD_01295 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DILKNDFD_01296 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
DILKNDFD_01297 1.2e-238 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DILKNDFD_01298 1.6e-196 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
DILKNDFD_01299 7.7e-77 ilvN 2.2.1.6 E Acetolactate synthase
DILKNDFD_01300 0.0 ilvB 2.2.1.6 EH Acetolactate synthase
DILKNDFD_01301 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
DILKNDFD_01302 2.9e-304 yloV S kinase related to dihydroxyacetone kinase
DILKNDFD_01303 1.4e-57 asp S cog cog1302
DILKNDFD_01304 3.2e-226 norN V Mate efflux family protein
DILKNDFD_01305 5.4e-278 thrC 4.2.3.1 E Threonine synthase
DILKNDFD_01306 1.6e-64 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
DILKNDFD_01307 8e-35 adhE 1.1.1.1, 1.2.1.10 C hydroxyacid-oxoacid transhydrogenase activity
DILKNDFD_01308 1.1e-65 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
DILKNDFD_01309 2.6e-136 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
DILKNDFD_01310 1.4e-63 adhE 1.1.1.1, 1.2.1.10 C Dehydrogenase
DILKNDFD_01311 0.0 pepO 3.4.24.71 O Peptidase family M13
DILKNDFD_01312 2.8e-38 treC 3.2.1.93 GH13 G COG0366 Glycosidases
DILKNDFD_01313 1.2e-69 treC 3.2.1.93 GH13 G COG0366 Glycosidases
DILKNDFD_01314 5.6e-64 treC 3.2.1.93 GH13 G COG0366 Glycosidases
DILKNDFD_01315 2.4e-54 treB 2.7.1.201 G PTS System
DILKNDFD_01316 5.8e-21 treR K DNA-binding transcription factor activity
DILKNDFD_01317 5.6e-86 treR K trehalose operon
DILKNDFD_01318 3.3e-95 ywlG S Belongs to the UPF0340 family
DILKNDFD_01320 3.3e-09 L PFAM Integrase, catalytic core
DILKNDFD_01321 9.6e-179 L Transposase
DILKNDFD_01322 3.1e-87 L Phage integrase family
DILKNDFD_01323 5.7e-46 S Domain of unknown function (DUF4298)
DILKNDFD_01324 2.9e-122 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
DILKNDFD_01325 2.6e-16 tnp L Transposase IS66 family
DILKNDFD_01326 5.8e-126 tnp L DDE domain
DILKNDFD_01328 1.6e-21
DILKNDFD_01330 1.3e-146 S Abortive infection C-terminus
DILKNDFD_01331 5.1e-111 hsdS_1 3.1.21.3 V Type I restriction modification DNA specificity domain
DILKNDFD_01332 3.2e-300 hsdM 2.1.1.72 V HsdM N-terminal domain
DILKNDFD_01333 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
DILKNDFD_01334 2.4e-26
DILKNDFD_01335 8.6e-140 L DNA integration
DILKNDFD_01336 1.8e-164 fba 4.1.2.13, 4.1.2.29 G aldolase
DILKNDFD_01338 3.6e-147 6.3.2.2 H gamma-glutamylcysteine synthetase
DILKNDFD_01339 2.2e-12 6.3.2.2 H gamma-glutamylcysteine synthetase
DILKNDFD_01340 3.3e-62 rplQ J ribosomal protein l17
DILKNDFD_01341 4.8e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DILKNDFD_01342 9.6e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
DILKNDFD_01343 4e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
DILKNDFD_01344 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
DILKNDFD_01345 2.7e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
DILKNDFD_01346 9.2e-121 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
DILKNDFD_01347 5.1e-232 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
DILKNDFD_01348 4.4e-58 rplO J binds to the 23S rRNA
DILKNDFD_01349 2.5e-23 rpmD J ribosomal protein l30
DILKNDFD_01350 1.7e-79 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
DILKNDFD_01351 1.9e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
DILKNDFD_01352 2.3e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DILKNDFD_01353 1.6e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
DILKNDFD_01354 1.5e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DILKNDFD_01355 1.6e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
DILKNDFD_01356 1.4e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
DILKNDFD_01357 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DILKNDFD_01358 6e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
DILKNDFD_01359 2.7e-26 rpmC J Belongs to the universal ribosomal protein uL29 family
DILKNDFD_01360 7.2e-71 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DILKNDFD_01361 2.1e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
DILKNDFD_01362 7.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
DILKNDFD_01363 4.9e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DILKNDFD_01364 8.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
DILKNDFD_01365 2.4e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
DILKNDFD_01366 5.7e-104 rplD J Forms part of the polypeptide exit tunnel
DILKNDFD_01367 1.1e-110 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
DILKNDFD_01368 1.3e-48 rpsJ J Involved in the binding of tRNA to the ribosomes
DILKNDFD_01369 7.8e-188 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
DILKNDFD_01370 0.0 XK27_09800 I Acyltransferase
DILKNDFD_01371 1.7e-35 XK27_09805 S MORN repeat protein
DILKNDFD_01372 1e-80 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DILKNDFD_01373 4.1e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DILKNDFD_01374 8.8e-83 adk 2.7.4.3 F topology modulation protein
DILKNDFD_01375 3.1e-172 yxaM EGP Major facilitator Superfamily
DILKNDFD_01376 1.9e-197 2.7.7.73, 2.7.7.80 H Involved in molybdopterin and thiamine biosynthesis, family 2
DILKNDFD_01378 1.9e-59 hsdS 3.1.21.3 V type I restriction modification DNA specificity domain
DILKNDFD_01379 2.6e-161 L Replication protein
DILKNDFD_01380 5.3e-69 hsp O Belongs to the small heat shock protein (HSP20) family
DILKNDFD_01382 9.9e-19 S Domain of unknown function (DUF4649)
DILKNDFD_01383 2.8e-52 amd 3.5.1.47 E Peptidase dimerisation domain
DILKNDFD_01384 4.7e-232 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
DILKNDFD_01385 1e-84
DILKNDFD_01386 1.6e-77 sigH K DNA-templated transcription, initiation
DILKNDFD_01387 3e-148 ykuT M mechanosensitive ion channel
DILKNDFD_01388 6.4e-219 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
DILKNDFD_01389 4.8e-73 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
DILKNDFD_01390 7.6e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
DILKNDFD_01391 1.3e-84 XK27_03960 S Protein of unknown function (DUF3013)
DILKNDFD_01392 3.7e-81 mutT3 3.6.1.13, 3.6.1.55 L NUDIX domain
DILKNDFD_01393 3.7e-179 prmA J Ribosomal protein L11 methyltransferase
DILKNDFD_01394 4.4e-135 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
DILKNDFD_01395 1.4e-42 F nucleotide catabolic process
DILKNDFD_01396 5.4e-139 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
DILKNDFD_01397 7.7e-140 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
DILKNDFD_01398 2.3e-51 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
DILKNDFD_01399 1.8e-83 nrdI F Belongs to the NrdI family
DILKNDFD_01400 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
DILKNDFD_01401 2.3e-75 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
DILKNDFD_01402 1.4e-09 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
DILKNDFD_01403 2e-27 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
DILKNDFD_01404 2.1e-58 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
DILKNDFD_01405 3.9e-46 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
DILKNDFD_01406 1.7e-237 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
DILKNDFD_01407 3.3e-112 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
DILKNDFD_01408 1.1e-113 fnr5 K Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
DILKNDFD_01409 6.5e-202 yhjX P Major Facilitator
DILKNDFD_01410 9.2e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
DILKNDFD_01411 5e-94 V VanZ like family
DILKNDFD_01414 1e-123 glnQ E abc transporter atp-binding protein
DILKNDFD_01415 9e-276 glnP P ABC transporter
DILKNDFD_01416 9.1e-153 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
DILKNDFD_01417 2.3e-136 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
DILKNDFD_01418 1.1e-185 tagO 2.7.8.33, 2.7.8.35 M transferase
DILKNDFD_01419 9.5e-144 sufC O ABC-type transport system involved in Fe-S cluster assembly, ATPase component
DILKNDFD_01420 6.3e-235 sufD O assembly protein SufD
DILKNDFD_01421 2.3e-237 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
DILKNDFD_01422 2.5e-74 nifU C SUF system FeS assembly protein, NifU family
DILKNDFD_01423 2.2e-273 sufB O assembly protein SufB
DILKNDFD_01424 7e-10 oppA E ABC transporter substrate-binding protein
DILKNDFD_01425 3.3e-138 oppA E ABC transporter substrate-binding protein
DILKNDFD_01426 4.2e-27 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
DILKNDFD_01427 6.6e-11 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
DILKNDFD_01428 1.7e-33 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
DILKNDFD_01429 9.8e-40 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
DILKNDFD_01430 8e-28 oppD P Belongs to the ABC transporter superfamily
DILKNDFD_01431 2.5e-32 oppD P Belongs to the ABC transporter superfamily
DILKNDFD_01432 4.8e-67 oppD P Belongs to the ABC transporter superfamily
DILKNDFD_01433 1.3e-44 oppD P Belongs to the ABC transporter superfamily
DILKNDFD_01434 9e-170 oppF P Belongs to the ABC transporter superfamily
DILKNDFD_01437 1.9e-158 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
DILKNDFD_01438 7.4e-183 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DILKNDFD_01439 1.9e-223 EGP Major facilitator Superfamily
DILKNDFD_01440 3.1e-72 adcR K transcriptional
DILKNDFD_01441 6.4e-136 adcC P ABC transporter, ATP-binding protein
DILKNDFD_01442 4.6e-130 adcB P ABC transporter (Permease
DILKNDFD_01443 1.4e-162 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
DILKNDFD_01444 5.6e-65 ptsG 2.7.1.199, 2.7.1.208 G pts system
DILKNDFD_01445 2.1e-150 ptsG 2.7.1.199, 2.7.1.208, 2.7.1.211 G pts system
DILKNDFD_01446 3.6e-106 ptsG 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
DILKNDFD_01447 6.8e-158 rgfB 3.1.3.90 L Endonuclease/Exonuclease/phosphatase family
DILKNDFD_01448 1.1e-256 pgi 5.3.1.9 G Belongs to the GPI family
DILKNDFD_01449 1.9e-127 yeeN K transcriptional regulatory protein
DILKNDFD_01450 9.8e-50 yajC U protein transport
DILKNDFD_01451 1.1e-141 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DILKNDFD_01452 2.2e-145 cdsA 2.7.7.41 S Belongs to the CDS family
DILKNDFD_01453 1.4e-231 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
DILKNDFD_01454 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
DILKNDFD_01455 0.0 WQ51_06230 S ABC transporter substrate binding protein
DILKNDFD_01456 5.2e-142 cmpC S abc transporter atp-binding protein
DILKNDFD_01457 1.3e-42 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
DILKNDFD_01458 4.1e-287 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
DILKNDFD_01459 1.6e-249 L Transposase
DILKNDFD_01461 3.4e-155 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
DILKNDFD_01462 0.0 KLT serine threonine protein kinase
DILKNDFD_01463 2.1e-280 V ABC transporter
DILKNDFD_01464 2.7e-12 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
DILKNDFD_01465 6.7e-87 Z012_04635 K sequence-specific DNA binding
DILKNDFD_01466 2e-25 Z012_04635 K sequence-specific DNA binding
DILKNDFD_01468 1.6e-53 C Radical SAM
DILKNDFD_01469 1.3e-156 C Radical SAM
DILKNDFD_01470 3.9e-287 V ABC transporter transmembrane region
DILKNDFD_01471 4.4e-89 K sequence-specific DNA binding
DILKNDFD_01472 1e-36 L Replication initiation factor
DILKNDFD_01473 1.4e-107 L Replication initiation factor
DILKNDFD_01474 1.9e-18 S Domain of unknown function (DUF3173)
DILKNDFD_01475 3.5e-216 int L Belongs to the 'phage' integrase family
DILKNDFD_01477 5.2e-237 rarA L ATPase related to the helicase subunit of the Holliday junction resolvase
DILKNDFD_01478 8.4e-27 rpmB J Belongs to the bacterial ribosomal protein bL28 family
DILKNDFD_01479 2.8e-44 yrzL S Belongs to the UPF0297 family
DILKNDFD_01480 1.2e-70 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DILKNDFD_01481 4.2e-44 yrzB S Belongs to the UPF0473 family
DILKNDFD_01482 2.3e-301 ccs S the current gene model (or a revised gene model) may contain a frame shift
DILKNDFD_01483 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
DILKNDFD_01484 7.5e-14
DILKNDFD_01485 2.6e-91 XK27_10930 K acetyltransferase
DILKNDFD_01486 3.7e-116 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DILKNDFD_01487 1.8e-147 yaaA S Belongs to the UPF0246 family
DILKNDFD_01488 9.9e-169 XK27_01785 S cog cog1284
DILKNDFD_01489 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
DILKNDFD_01491 1.6e-241 hisS 6.1.1.21 J histidyl-tRNA synthetase
DILKNDFD_01492 5.7e-52 metE 2.1.1.14 E Methionine synthase
DILKNDFD_01493 7.6e-64 metE 2.1.1.14 E Methionine synthase
DILKNDFD_01494 9.2e-36 metE 2.1.1.14 E Methionine synthase
DILKNDFD_01495 2e-25 rpmF J Belongs to the bacterial ribosomal protein bL32 family
DILKNDFD_01496 6.7e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
DILKNDFD_01498 3.1e-20 yegS 2.7.1.107 I lipid kinase activity
DILKNDFD_01499 2.7e-95 S Hydrophobic domain protein
DILKNDFD_01501 3.7e-27 S Membrane
DILKNDFD_01502 3.1e-101
DILKNDFD_01503 1.8e-23 S Small integral membrane protein
DILKNDFD_01504 3.1e-85 M Protein conserved in bacteria
DILKNDFD_01505 1.1e-11 K CsbD-like
DILKNDFD_01506 3.4e-13 nudL L hydrolase
DILKNDFD_01507 4e-19 K negative regulation of transcription, DNA-templated
DILKNDFD_01508 1.7e-23 K negative regulation of transcription, DNA-templated
DILKNDFD_01510 1.8e-19 XK27_06920 S Protein of unknown function (DUF1700)
DILKNDFD_01511 1.8e-88 S Putative adhesin
DILKNDFD_01512 3.9e-161 XK27_06930 V domain protein
DILKNDFD_01513 6.4e-96 XK27_06935 K transcriptional regulator
DILKNDFD_01514 1.8e-54 ypaA M Membrane
DILKNDFD_01515 2.7e-08
DILKNDFD_01516 9.8e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DILKNDFD_01517 8.2e-48 veg S Biofilm formation stimulator VEG
DILKNDFD_01518 1.5e-245 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
DILKNDFD_01519 3.9e-70 rplI J binds to the 23S rRNA
DILKNDFD_01520 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
DILKNDFD_01521 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
DILKNDFD_01522 1.5e-77 F NUDIX domain
DILKNDFD_01523 8.6e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
DILKNDFD_01524 0.0 S Bacterial membrane protein, YfhO
DILKNDFD_01525 1.5e-91 isaA GH23 M Immunodominant staphylococcal antigen A
DILKNDFD_01526 3.1e-93 lytE M LysM domain protein
DILKNDFD_01527 2.2e-137 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DILKNDFD_01528 5.2e-153 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DILKNDFD_01529 2.2e-151 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DILKNDFD_01530 6.9e-90 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DILKNDFD_01531 3.7e-138 ymfM S sequence-specific DNA binding
DILKNDFD_01532 1.4e-242 ymfH S Peptidase M16
DILKNDFD_01533 1.4e-234 ymfF S Peptidase M16
DILKNDFD_01534 1.6e-45 yaaA S S4 domain protein YaaA
DILKNDFD_01535 5.9e-205 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
DILKNDFD_01536 1.5e-275 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
DILKNDFD_01537 8.2e-193 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
DILKNDFD_01538 1.1e-153 yvjA S membrane
DILKNDFD_01539 6.7e-306 ybiT S abc transporter atp-binding protein
DILKNDFD_01540 0.0 XK27_10405 S Bacterial membrane protein YfhO
DILKNDFD_01544 6.2e-120 yoaK S Psort location CytoplasmicMembrane, score
DILKNDFD_01545 1.1e-86 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
DILKNDFD_01546 5.3e-194 htrA 3.4.21.107 O Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain'
DILKNDFD_01547 8.5e-134 parB K Belongs to the ParB family
DILKNDFD_01548 1.3e-257 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
DILKNDFD_01549 6.3e-202 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
DILKNDFD_01550 1.1e-29 yyzM S Protein conserved in bacteria
DILKNDFD_01551 1.9e-203 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
DILKNDFD_01552 1.4e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
DILKNDFD_01553 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DILKNDFD_01554 1.7e-39 yabO J Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
DILKNDFD_01555 7.9e-61 divIC D Septum formation initiator
DILKNDFD_01557 1.3e-240 XK27_09285 3.5.2.6 V Beta-lactamase enzyme family
DILKNDFD_01558 5e-240 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
DILKNDFD_01559 3.4e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
DILKNDFD_01560 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DILKNDFD_01561 1.7e-162 L Transposase
DILKNDFD_01562 4.4e-37 L Transposase
DILKNDFD_01563 6.4e-18 L transposase activity
DILKNDFD_01566 2.1e-43
DILKNDFD_01567 2.9e-54 S TM2 domain
DILKNDFD_01568 5.8e-163 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
DILKNDFD_01569 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
DILKNDFD_01570 5.7e-25 secE U Belongs to the SecE SEC61-gamma family
DILKNDFD_01571 8.4e-96 nusG K Participates in transcription elongation, termination and antitermination
DILKNDFD_01572 4.6e-85 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I phosphatidate phosphatase activity
DILKNDFD_01573 6e-55 cof Q phosphatase activity
DILKNDFD_01574 1.1e-34 cof Q phosphatase activity
DILKNDFD_01575 1.5e-135 glcR K transcriptional regulator (DeoR family)
DILKNDFD_01576 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
DILKNDFD_01577 3.8e-40 K transcriptional
DILKNDFD_01579 2.6e-76 S thiolester hydrolase activity
DILKNDFD_01580 1e-139 S COG1073 Hydrolases of the alpha beta superfamily
DILKNDFD_01581 9.6e-280 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DILKNDFD_01582 2.1e-151 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
DILKNDFD_01583 3.2e-77 yhaI L Membrane
DILKNDFD_01584 4.6e-260 pepC 3.4.22.40 E aminopeptidase
DILKNDFD_01585 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
DILKNDFD_01586 2.4e-107 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
DILKNDFD_01587 4.9e-93 ypsA S Belongs to the UPF0398 family
DILKNDFD_01588 5.1e-51 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
DILKNDFD_01589 5.6e-222 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
DILKNDFD_01590 2.5e-296 mapZ D Early cell division protein that marks the future cell division site and supports proper FtsZ ring positioning
DILKNDFD_01591 0.0 snf 2.7.11.1 L Superfamily II DNA RNA helicases, SNF2 family'
DILKNDFD_01592 2.5e-23
DILKNDFD_01593 2.6e-255 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
DILKNDFD_01594 7.3e-80 XK27_09675 K -acetyltransferase
DILKNDFD_01595 0.0 mltG ADL Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
DILKNDFD_01596 1.6e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
DILKNDFD_01597 7.1e-46 L Integrase core domain protein
DILKNDFD_01598 1.6e-32 L Integrase core domain protein
DILKNDFD_01599 3.8e-165 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
DILKNDFD_01600 6e-45 acyP 3.6.1.7 C Belongs to the acylphosphatase family
DILKNDFD_01601 1.9e-130 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DILKNDFD_01602 4.7e-93 XK27_09705 6.1.1.14 S HD superfamily hydrolase
DILKNDFD_01603 1.5e-97 ybhL S Belongs to the BI1 family
DILKNDFD_01606 1.8e-242 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
DILKNDFD_01607 3.4e-89 K transcriptional regulator
DILKNDFD_01608 7.6e-36 yneF S UPF0154 protein
DILKNDFD_01609 1.3e-148 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
DILKNDFD_01610 3.2e-186 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
DILKNDFD_01611 3.5e-99 XK27_09740 S Phosphoesterase
DILKNDFD_01612 5.4e-86 ykuL S CBS domain
DILKNDFD_01613 3.7e-137 xerD L tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site
DILKNDFD_01614 3.1e-122 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
DILKNDFD_01615 3e-99 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
DILKNDFD_01616 6.1e-140 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
DILKNDFD_01617 1.8e-40 yidD S Could be involved in insertion of integral membrane proteins into the membrane
DILKNDFD_01618 1.2e-258 trkH P Cation transport protein
DILKNDFD_01619 1.5e-247 trkA P Potassium transporter peripheral membrane component
DILKNDFD_01620 7.9e-96 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
DILKNDFD_01621 3.2e-90 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
DILKNDFD_01622 4.8e-114 bcrC 3.6.1.27 I Membrane-associated phospholipid phosphatase
DILKNDFD_01623 5.6e-161 K sequence-specific DNA binding
DILKNDFD_01624 1.2e-32 V protein secretion by the type I secretion system
DILKNDFD_01625 7.4e-36 V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
DILKNDFD_01626 1.3e-56 V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
DILKNDFD_01627 1.6e-25 V protein secretion by the type I secretion system
DILKNDFD_01628 3.4e-68 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
DILKNDFD_01629 3.7e-22 yhaI L Membrane
DILKNDFD_01630 1.4e-54 S Domain of unknown function (DUF4173)
DILKNDFD_01631 6.8e-95 ureI S AmiS/UreI family transporter
DILKNDFD_01632 7.6e-46 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
DILKNDFD_01633 7.8e-54 ureB 3.5.1.5 E Belongs to the urease beta subunit family
DILKNDFD_01634 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
DILKNDFD_01635 6.6e-78 ureE O enzyme active site formation
DILKNDFD_01636 5.3e-130 ureF O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
DILKNDFD_01637 9.5e-112 ureG KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
DILKNDFD_01638 8.9e-161 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
DILKNDFD_01639 2.3e-176 cbiM P PDGLE domain
DILKNDFD_01640 1.1e-136 P cobalt transport protein
DILKNDFD_01641 1.6e-131 cbiO P ABC transporter
DILKNDFD_01642 5.3e-153 ET amino acid transport
DILKNDFD_01643 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
DILKNDFD_01644 0.0 3.3.1.1, 3.6.1.55, 3.6.1.67 F NUDIX domain
DILKNDFD_01645 3.8e-205 EGP Transmembrane secretion effector
DILKNDFD_01646 4e-153 ET amino acid transport
DILKNDFD_01647 3.7e-165 metQ M Belongs to the NlpA lipoprotein family
DILKNDFD_01648 1.6e-85 dapE 3.5.1.18 E COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases
DILKNDFD_01649 1.4e-62 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase activity
DILKNDFD_01650 1e-63 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase activity
DILKNDFD_01651 1.2e-189 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
DILKNDFD_01652 2e-97 metI P ABC transporter (Permease
DILKNDFD_01653 4.6e-211 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
DILKNDFD_01654 5.5e-158 salL 2.5.1.63, 2.5.1.94 S S-adenosyl-l-methionine hydroxide adenosyltransferase
DILKNDFD_01655 8e-94 S UPF0397 protein
DILKNDFD_01656 0.0 ykoD P abc transporter atp-binding protein
DILKNDFD_01657 5.9e-149 cbiQ P cobalt transport
DILKNDFD_01658 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
DILKNDFD_01659 9.7e-13 ulaG S L-ascorbate 6-phosphate lactonase
DILKNDFD_01660 1.9e-121 ktrA P COG0569 K transport systems, NAD-binding component
DILKNDFD_01661 3.4e-242 P COG0168 Trk-type K transport systems, membrane components
DILKNDFD_01662 1.4e-130 rsmG 2.1.1.170 J Ribosomal RNA small subunit methyltransferase G
DILKNDFD_01663 2.1e-91 yceD K metal-binding, possibly nucleic acid-binding protein
DILKNDFD_01664 1.8e-122 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
DILKNDFD_01665 2.8e-282 T PhoQ Sensor
DILKNDFD_01666 4.7e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DILKNDFD_01667 1.6e-216 dnaB L Replication initiation and membrane attachment
DILKNDFD_01668 5.2e-167 dnaI L Primosomal protein DnaI
DILKNDFD_01669 2e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
DILKNDFD_01671 2.7e-34
DILKNDFD_01672 6.7e-14 yrdC 3.5.1.19 Q isochorismatase
DILKNDFD_01673 3e-27 L Integrase core domain protein
DILKNDFD_01674 6.9e-09 L transposition
DILKNDFD_01675 1.3e-22 L Transposase
DILKNDFD_01676 1.2e-40 L transposase activity
DILKNDFD_01677 3.3e-231 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
DILKNDFD_01678 4.2e-62 manO S protein conserved in bacteria
DILKNDFD_01679 6.2e-168 manN G PTS system mannose fructose sorbose family IID component
DILKNDFD_01680 2.3e-116 manM G pts system
DILKNDFD_01681 1.1e-181 manL 2.7.1.191 G pts system
DILKNDFD_01682 1.5e-140 XK27_00940 1.2.1.70, 3.5.1.9 S Metal-dependent hydrolase
DILKNDFD_01683 1e-153 yitU 3.1.3.104 S hydrolases of the HAD superfamily
DILKNDFD_01684 2.1e-247 pbuO S permease
DILKNDFD_01685 1.4e-77 ydiB 2.7.1.221, 5.1.1.1 M ATPase or kinase
DILKNDFD_01686 2.4e-92 XK27_05885 2.3.1.82 M Acetyltransferase GNAT Family
DILKNDFD_01687 2.5e-220 brpA K Transcriptional
DILKNDFD_01688 3.9e-81 rimP S Required for maturation of 30S ribosomal subunits
DILKNDFD_01689 3.1e-212 nusA K Participates in both transcription termination and antitermination
DILKNDFD_01690 1e-47 ylxR K Nucleic-acid-binding protein implicated in transcription termination
DILKNDFD_01691 1.4e-41 ylxQ J ribosomal protein
DILKNDFD_01692 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
DILKNDFD_01693 1.7e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DILKNDFD_01694 2e-22 yvdD 3.2.2.10 S Belongs to the LOG family
DILKNDFD_01695 8.9e-38 yvdD 3.2.2.10 L Belongs to the LOG family
DILKNDFD_01696 4.1e-234 femA 2.3.2.10, 2.3.2.16, 2.3.2.17, 2.3.2.18 V protein involved in methicillin resistance
DILKNDFD_01697 1.4e-275 murE 6.3.2.13, 6.3.2.7 M to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DILKNDFD_01698 4.5e-283 ytgP S Membrane protein involved in the export of O-antigen and teichoic acid
DILKNDFD_01699 3.3e-96 pacL 3.6.3.8, 3.6.3.9 P cation transport ATPase
DILKNDFD_01700 4.7e-202 metB 2.5.1.48, 4.4.1.8 E cystathionine
DILKNDFD_01701 1e-223 malY 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
DILKNDFD_01703 4.4e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
DILKNDFD_01704 2.9e-105 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
DILKNDFD_01705 3.4e-74 ylbF S Belongs to the UPF0342 family
DILKNDFD_01706 7.1e-46 ylbG S UPF0298 protein
DILKNDFD_01707 1.1e-212 livJ E COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component
DILKNDFD_01708 1.9e-145 livH E Belongs to the binding-protein-dependent transport system permease family
DILKNDFD_01709 1.4e-138 livM E Belongs to the binding-protein-dependent transport system permease family
DILKNDFD_01710 9.6e-138 livG E COG0411 ABC-type branched-chain amino acid transport systems, ATPase component
DILKNDFD_01711 9.6e-124 livF E COG0410 ABC-type branched-chain amino acid transport systems, ATPase component
DILKNDFD_01712 2.8e-70 acuB S IMP dehydrogenase activity
DILKNDFD_01713 3.3e-43 acuB S IMP dehydrogenase activity
DILKNDFD_01714 2.2e-168 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
DILKNDFD_01715 6.3e-111 yvyE 3.4.13.9 S YigZ family
DILKNDFD_01716 1.3e-254 comFA L Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
DILKNDFD_01717 4.4e-123 comFC S Competence protein
DILKNDFD_01718 2.1e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DILKNDFD_01725 2.1e-166 ppaC 3.6.1.1 C inorganic pyrophosphatase
DILKNDFD_01726 6.4e-108 S Domain of unknown function (DUF1803)
DILKNDFD_01727 1.3e-101 ygaC J Belongs to the UPF0374 family
DILKNDFD_01728 7.3e-133 recX 2.4.1.337 GT4 S Regulatory protein RecX
DILKNDFD_01729 1.4e-259 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DILKNDFD_01730 3e-192 asnA 6.3.1.1 E aspartate--ammonia ligase
DILKNDFD_01731 3.1e-256 lysC 2.7.2.4 E Belongs to the aspartokinase family
DILKNDFD_01732 2.1e-114 S Haloacid dehalogenase-like hydrolase
DILKNDFD_01733 4e-139 phaB 5.3.3.14, 5.3.3.18 I Belongs to the enoyl-CoA hydratase isomerase family
DILKNDFD_01734 4e-72 marR K Transcriptional regulator, MarR family
DILKNDFD_01735 2.3e-173 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
DILKNDFD_01736 3.3e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
DILKNDFD_01737 6.8e-173 fabK 1.3.1.9 S 2-Nitropropane dioxygenase
DILKNDFD_01738 1.9e-164 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
DILKNDFD_01739 1.6e-126 IQ reductase
DILKNDFD_01740 2.6e-233 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
DILKNDFD_01741 7.7e-56 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
DILKNDFD_01742 1.5e-71 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
DILKNDFD_01743 7.5e-258 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
DILKNDFD_01744 1.1e-158 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
DILKNDFD_01745 3e-139 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
DILKNDFD_01746 4.7e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
DILKNDFD_01747 1.1e-92 tnp L Transposase
DILKNDFD_01748 8.1e-203 rny D Endoribonuclease that initiates mRNA decay
DILKNDFD_01749 1.8e-84 L Transposase
DILKNDFD_01750 5.6e-114 fruR K transcriptional
DILKNDFD_01751 5.5e-164 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
DILKNDFD_01752 3.9e-54 fruA 2.7.1.202 GT PTS system, Lactose/Cellobiose specific IIB subunit
DILKNDFD_01753 2.2e-49 fruA 2.7.1.202 GT PTS system, Lactose/Cellobiose specific IIB subunit
DILKNDFD_01754 2.7e-126 fruA 2.7.1.202 G phosphotransferase system
DILKNDFD_01755 5.3e-35 fruA 2.7.1.202 G phosphotransferase system
DILKNDFD_01756 1.4e-261 gor 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DILKNDFD_01757 2.4e-242 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
DILKNDFD_01759 6.1e-213 iscS2 2.8.1.7 E Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes
DILKNDFD_01760 2.9e-229 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DILKNDFD_01761 2.2e-295 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
DILKNDFD_01762 7.2e-258 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
DILKNDFD_01763 6.4e-29 2.3.1.128 K acetyltransferase
DILKNDFD_01764 4.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
DILKNDFD_01765 1.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
DILKNDFD_01766 7.7e-134 ydaF_2 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DILKNDFD_01767 2.6e-64 WQ51_03320 S cog cog4835
DILKNDFD_01768 5.8e-144 XK27_08360 S EDD domain protein, DegV family
DILKNDFD_01769 3e-139 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
DILKNDFD_01770 1.9e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
DILKNDFD_01771 0.0 yfmR S abc transporter atp-binding protein
DILKNDFD_01772 1.6e-24 U response to pH
DILKNDFD_01773 1.1e-141 3.6.1.13, 3.6.1.55 F AdP-ribose pyrophosphatase
DILKNDFD_01774 4.7e-128 nadD 2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55 H adenylyltransferase
DILKNDFD_01775 2.6e-59 nadD 2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55 H adenylyltransferase
DILKNDFD_01776 1.8e-256 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
DILKNDFD_01777 1e-69 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
DILKNDFD_01778 1.9e-77 K DNA-binding transcription factor activity
DILKNDFD_01779 0.0 lmrA1 V abc transporter atp-binding protein
DILKNDFD_01780 0.0 lmrA2 V abc transporter atp-binding protein
DILKNDFD_01781 2.2e-18 K Acetyltransferase (GNAT) family
DILKNDFD_01782 3.2e-78 sptS 2.7.13.3 T Histidine kinase
DILKNDFD_01783 4.9e-131 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
DILKNDFD_01784 1.3e-91 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
DILKNDFD_01785 5.3e-161 cvfB S Protein conserved in bacteria
DILKNDFD_01786 1.6e-34 yozE S Belongs to the UPF0346 family
DILKNDFD_01787 5.1e-119 usp 3.5.1.104, 3.5.1.28 CBM50 S pathogenesis
DILKNDFD_01789 3e-61 rlpA M LysM domain protein
DILKNDFD_01790 8e-191 phoH T phosphate starvation-inducible protein PhoH
DILKNDFD_01794 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DILKNDFD_01795 1.8e-164 K transcriptional regulator (lysR family)
DILKNDFD_01796 1.4e-186 coiA 3.6.4.12 S Competence protein
DILKNDFD_01797 0.0 pepF E oligoendopeptidase F
DILKNDFD_01798 5.4e-127 yrrM 2.1.1.104 S O-Methyltransferase
DILKNDFD_01799 2e-176 prsA 3.1.3.16, 5.2.1.8 O peptidyl-prolyl cis-trans isomerase activity
DILKNDFD_01800 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DILKNDFD_01801 7.3e-50 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
DILKNDFD_01802 7e-124 tnp L DDE domain
DILKNDFD_01803 3.7e-88 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
DILKNDFD_01804 3.4e-41 3.4.17.14, 3.5.1.28 NU amidase activity
DILKNDFD_01805 1.3e-30 3.4.17.14, 3.5.1.28 NU amidase activity
DILKNDFD_01806 4.9e-145 cnhA 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
DILKNDFD_01807 1.1e-225 mtnE 2.6.1.83 E mutations do not affect methionine salvage in vivo however
DILKNDFD_01808 1.5e-191 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
DILKNDFD_01809 1.5e-222 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
DILKNDFD_01810 1.9e-130 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
DILKNDFD_01811 1.6e-210 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
DILKNDFD_01812 2e-131 yxkH G deacetylase
DILKNDFD_01813 1.8e-237 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
DILKNDFD_01814 1.1e-153 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
DILKNDFD_01815 6.1e-152 rarD S Transporter
DILKNDFD_01816 2.6e-16 T peptidase
DILKNDFD_01817 8.9e-14 coiA 3.6.4.12 S Competence protein
DILKNDFD_01818 1.1e-89 S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
DILKNDFD_01819 1.9e-46 2.3.1.128, 5.2.1.8 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
DILKNDFD_01820 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
DILKNDFD_01821 3.2e-16 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DILKNDFD_01822 4.3e-124 atpB C it plays a direct role in the translocation of protons across the membrane
DILKNDFD_01823 3.3e-78 atpF C ATP synthase F(0) sector subunit b
DILKNDFD_01824 9.3e-87 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DILKNDFD_01825 3.8e-279 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
DILKNDFD_01826 2.5e-158 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
DILKNDFD_01827 2.7e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
DILKNDFD_01828 2e-66 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
DILKNDFD_01829 2.8e-230 ftsW D Belongs to the SEDS family
DILKNDFD_01830 9.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
DILKNDFD_01831 1.4e-136 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
DILKNDFD_01832 2.8e-111 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DILKNDFD_01833 5.4e-161 holB 2.7.7.7 L dna polymerase iii
DILKNDFD_01834 1.2e-133 yaaT S stage 0 sporulation protein
DILKNDFD_01835 9.5e-55 yabA L Involved in initiation control of chromosome replication
DILKNDFD_01836 3e-159 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DILKNDFD_01837 5.8e-225 amt P Ammonium Transporter
DILKNDFD_01838 1.8e-51 glnB K Belongs to the P(II) protein family
DILKNDFD_01839 2.1e-104 mur1 NU mannosyl-glycoprotein
DILKNDFD_01840 5.8e-149 XK27_04800 S Sucrose-6F-phosphate phosphohydrolase
DILKNDFD_01841 2.9e-68 nptA P sodium-dependent phosphate transmembrane transporter activity
DILKNDFD_01842 2.1e-221 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
DILKNDFD_01843 1.8e-53
DILKNDFD_01844 7.5e-26
DILKNDFD_01845 5.1e-60
DILKNDFD_01846 6.1e-63 S membrane
DILKNDFD_01847 4.8e-176 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
DILKNDFD_01848 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
DILKNDFD_01849 4.5e-39 ynzC S UPF0291 protein
DILKNDFD_01850 1.8e-254 cycA E permease
DILKNDFD_01851 3.2e-09 uvrX 2.7.7.7 L impB/mucB/samB family
DILKNDFD_01852 5.8e-71 pts33BCA G pts system
DILKNDFD_01853 1.1e-76 pts33BCA G pts system
DILKNDFD_01854 5.5e-84 pts33BCA G pts system
DILKNDFD_01855 3.2e-141 ppiA 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
DILKNDFD_01860 1.4e-167 fhuR K transcriptional regulator (lysR family)
DILKNDFD_01861 1.5e-77 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
DILKNDFD_01862 5e-162 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
DILKNDFD_01863 3.7e-88 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
DILKNDFD_01864 4.9e-227 pyrP F uracil Permease
DILKNDFD_01865 1e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
DILKNDFD_01866 1.1e-211 carA 6.3.5.5 F carbamoyl-phosphate synthetase glutamine chain
DILKNDFD_01867 0.0 carB 6.3.5.5 F carbamoyl-phosphate synthetase ammonia chain
DILKNDFD_01868 4.6e-132 2.1.1.223 S Putative SAM-dependent methyltransferase
DILKNDFD_01869 7.6e-21 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DILKNDFD_01870 6.9e-37 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
DILKNDFD_01871 3.6e-35 V efflux transmembrane transporter activity
DILKNDFD_01872 1.7e-29 V efflux transmembrane transporter activity
DILKNDFD_01873 8.2e-77 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
DILKNDFD_01874 3e-52 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
DILKNDFD_01875 9.1e-110 L Transposase
DILKNDFD_01876 8.3e-112 L Transposase
DILKNDFD_01877 1.6e-18 L Integrase core domain
DILKNDFD_01878 3.1e-116 devA 3.6.3.25 V abc transporter atp-binding protein
DILKNDFD_01879 1.5e-162 hrtB V MacB-like periplasmic core domain
DILKNDFD_01882 3e-92 S MucBP domain
DILKNDFD_01883 1.9e-49 M YSIRK type signal peptide
DILKNDFD_01884 4.3e-143 M the current gene model (or a revised gene model) may contain a
DILKNDFD_01885 0.0 mdlB V abc transporter atp-binding protein
DILKNDFD_01886 0.0 lmrA V abc transporter atp-binding protein
DILKNDFD_01887 4.6e-199 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
DILKNDFD_01888 1.3e-120 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
DILKNDFD_01889 1.3e-214 2.7.13.3 T signal transduction protein with a C-terminal ATPase domain
DILKNDFD_01890 2.5e-132 rr02 KT response regulator
DILKNDFD_01891 4.1e-81 2.7.7.73, 2.7.7.80 H Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
DILKNDFD_01892 9e-62 2.7.7.73, 2.7.7.80 H Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
DILKNDFD_01893 2.1e-34 2.7.7.73, 2.7.7.80 H Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
DILKNDFD_01894 4.8e-168 V ABC transporter
DILKNDFD_01895 5.4e-122 sagI S ABC-2 type transporter
DILKNDFD_01896 6.9e-197 yceA S Belongs to the UPF0176 family
DILKNDFD_01897 1.6e-28 XK27_00085 K Transcriptional
DILKNDFD_01898 7.3e-22
DILKNDFD_01899 5.3e-144 deoD_1 2.4.2.3 F Phosphorylase superfamily
DILKNDFD_01900 2.5e-113 S VIT family
DILKNDFD_01901 1.1e-130 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
DILKNDFD_01902 1.5e-219 hipO 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
DILKNDFD_01903 3.4e-17 ald 1.4.1.1 E alanine dehydrogenase activity
DILKNDFD_01904 1.7e-46 ald 1.4.1.1 C Belongs to the AlaDH PNT family
DILKNDFD_01905 8e-249 merA 1.16.1.1 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
DILKNDFD_01906 2.3e-104 GBS0088 J protein conserved in bacteria
DILKNDFD_01907 2.5e-142 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
DILKNDFD_01908 6e-174 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
DILKNDFD_01909 4.6e-180 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I GHMP kinases N terminal domain
DILKNDFD_01910 8.6e-187 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
DILKNDFD_01911 5.1e-254 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
DILKNDFD_01912 1e-96 nudF 3.6.1.13 L AdP-ribose pyrophosphatase
DILKNDFD_01913 2.5e-21
DILKNDFD_01914 5.9e-118 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DILKNDFD_01916 3.5e-07 U protein secretion
DILKNDFD_01917 2.3e-49 U protein secretion
DILKNDFD_01918 1.9e-11 U protein secretion
DILKNDFD_01919 1.1e-192 dgs 2.4.1.208 GT4 M Glycosyltransferase, group 1 family protein
DILKNDFD_01920 1.8e-248 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
DILKNDFD_01921 4.9e-21 XK27_13030
DILKNDFD_01922 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DILKNDFD_01923 8.9e-57 S hydrolase activity, acting on ester bonds
DILKNDFD_01924 9.4e-71 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
DILKNDFD_01925 1.2e-163 S Protein of unknown function (DUF3114)
DILKNDFD_01926 7.9e-22 S Protein of unknown function (DUF3114)
DILKNDFD_01927 8.3e-117 yqfA K protein, Hemolysin III
DILKNDFD_01928 1e-25 K hmm pf08876
DILKNDFD_01929 2.7e-233 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
DILKNDFD_01930 1.7e-218 mvaS 2.3.3.10 I synthase
DILKNDFD_01931 2.2e-167 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
DILKNDFD_01932 2.2e-90 folA 1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
DILKNDFD_01933 9.7e-22
DILKNDFD_01934 2e-225 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
DILKNDFD_01935 3e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
DILKNDFD_01936 1.5e-250 mmuP E amino acid
DILKNDFD_01937 5.9e-177 mmuM 1.5.1.20, 2.1.1.10 H Homocysteine
DILKNDFD_01938 1.4e-29 S Domain of unknown function (DUF1912)
DILKNDFD_01939 4.9e-15 L Helix-hairpin-helix DNA-binding motif class 1
DILKNDFD_01940 2.3e-100 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
DILKNDFD_01941 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
DILKNDFD_01942 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)