ORF_ID e_value Gene_name EC_number CAZy COGs Description
PPEFFPBC_00012 5.3e-11
PPEFFPBC_00018 3.6e-138 mreC M Involved in formation and maintenance of cell shape
PPEFFPBC_00019 8.2e-88 mreD M Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
PPEFFPBC_00020 2e-96 usp 3.5.1.28 CBM50 S CHAP domain
PPEFFPBC_00021 4.3e-175 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PPEFFPBC_00022 2.5e-26
PPEFFPBC_00023 3.6e-216 araT 2.6.1.1 E Aminotransferase
PPEFFPBC_00024 2.9e-142 recO L Involved in DNA repair and RecF pathway recombination
PPEFFPBC_00025 2.5e-178 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PPEFFPBC_00026 4.2e-34 acpP1 IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PPEFFPBC_00027 2e-129 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PPEFFPBC_00028 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PPEFFPBC_00029 8.6e-273 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PPEFFPBC_00030 3.6e-188 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PPEFFPBC_00031 5.2e-101 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PPEFFPBC_00032 2.4e-292 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PPEFFPBC_00033 1e-90 L transposase activity
PPEFFPBC_00034 3.5e-50 L transposition
PPEFFPBC_00035 6.4e-159 S CHAP domain
PPEFFPBC_00036 2e-241 purD 6.3.4.13 F Belongs to the GARS family
PPEFFPBC_00037 4.9e-76 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PPEFFPBC_00038 8.5e-204 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PPEFFPBC_00039 3.2e-46 1.1.1.169 H Ketopantoate reductase
PPEFFPBC_00040 2.1e-85 1.1.1.169 H Ketopantoate reductase
PPEFFPBC_00041 6.6e-34
PPEFFPBC_00042 6.6e-136 J Domain of unknown function (DUF4041)
PPEFFPBC_00044 3.3e-247 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PPEFFPBC_00045 0.0 argS 6.1.1.19 J Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
PPEFFPBC_00046 2.5e-68 L Transposase
PPEFFPBC_00047 7.9e-39 L Helix-turn-helix domain of transposase family ISL3
PPEFFPBC_00048 8.2e-70 argR K Regulates arginine biosynthesis genes
PPEFFPBC_00049 1.1e-56 ymcA 3.6.3.21 S Belongs to the UPF0342 family
PPEFFPBC_00050 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PPEFFPBC_00051 2.3e-78 S Protein of unknown function (DUF3021)
PPEFFPBC_00052 5.4e-69 K LytTr DNA-binding domain
PPEFFPBC_00054 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PPEFFPBC_00056 7.8e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PPEFFPBC_00057 1.9e-106 tag 3.2.2.20 L 3-methyladenine DNA glycosylase
PPEFFPBC_00058 2.9e-232 cinA 3.5.1.42 S Belongs to the CinA family
PPEFFPBC_00059 4.7e-205 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PPEFFPBC_00060 2.3e-66 spxA_2 1.20.4.1 P Belongs to the ArsC family
PPEFFPBC_00062 1.9e-07
PPEFFPBC_00067 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PPEFFPBC_00068 2.8e-235 pepS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
PPEFFPBC_00069 1.6e-35 XK27_02060 S Transglycosylase associated protein
PPEFFPBC_00070 4.4e-55 badR K DNA-binding transcription factor activity
PPEFFPBC_00071 6e-97 S reductase
PPEFFPBC_00072 1.2e-32 L Integrase core domain protein
PPEFFPBC_00074 1.5e-172 yocD 3.4.17.13 V proteins, homologs of microcin C7 resistance protein MccF
PPEFFPBC_00076 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
PPEFFPBC_00077 3e-182 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PPEFFPBC_00078 9.3e-83 S Putative small multi-drug export protein
PPEFFPBC_00079 6.2e-76 ctsR K Belongs to the CtsR family
PPEFFPBC_00080 0.0 clpC O Belongs to the ClpA ClpB family
PPEFFPBC_00081 3.6e-72 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PPEFFPBC_00082 3.9e-59 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PPEFFPBC_00083 7.1e-231 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PPEFFPBC_00084 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PPEFFPBC_00085 2.2e-142 S SseB protein N-terminal domain
PPEFFPBC_00086 1.1e-112 cysE 2.3.1.30 E serine acetyltransferase
PPEFFPBC_00087 1.5e-255 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PPEFFPBC_00088 2.7e-67 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PPEFFPBC_00091 2.4e-133 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PPEFFPBC_00092 4.6e-91 yacP S RNA-binding protein containing a PIN domain
PPEFFPBC_00093 2.8e-154 degV S DegV family
PPEFFPBC_00094 4.3e-20 K helix-turn-helix
PPEFFPBC_00095 3e-181 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PPEFFPBC_00096 2e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PPEFFPBC_00097 9.5e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
PPEFFPBC_00098 1.1e-225 int2 L Phage integrase family
PPEFFPBC_00099 2e-39 S Helix-turn-helix domain
PPEFFPBC_00100 3.4e-191 L Replication initiation factor
PPEFFPBC_00101 4.1e-37
PPEFFPBC_00102 1.2e-15 cylB V ABC-2 type transporter
PPEFFPBC_00103 1.4e-62 K WHG domain
PPEFFPBC_00104 4.7e-17 K Transcriptional regulator
PPEFFPBC_00105 1.1e-19 K Transcriptional regulator
PPEFFPBC_00106 1.8e-96 1.6.5.2 S NADPH-quinone reductase (modulator of drug activity B)
PPEFFPBC_00107 4.4e-209 L Phage integrase family
PPEFFPBC_00108 1e-33 S Helix-turn-helix domain
PPEFFPBC_00109 8.4e-97 S Plasmid replication protein
PPEFFPBC_00110 3.5e-38
PPEFFPBC_00111 5.2e-198 D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
PPEFFPBC_00112 1.9e-47
PPEFFPBC_00114 4.3e-181 norB P Major Facilitator Superfamily
PPEFFPBC_00115 3.8e-78 C nadph quinone reductase
PPEFFPBC_00116 1.4e-37 K Transcriptional regulator
PPEFFPBC_00117 1.4e-68 S phosphonoacetaldehyde hydrolase activity
PPEFFPBC_00118 1.7e-28 pcaC 3.1.1.24, 4.1.1.44 S peroxiredoxin activity
PPEFFPBC_00119 6.5e-31 ais G Phosphoglycerate mutase
PPEFFPBC_00123 6.3e-226 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PPEFFPBC_00124 1.1e-83 L Transposase
PPEFFPBC_00125 1e-13 rpmH J Ribosomal protein L34
PPEFFPBC_00126 1.2e-260 S PFAM Uncharacterised protein family UPF0236
PPEFFPBC_00127 1.2e-23 L Transposase
PPEFFPBC_00128 3.1e-234 L Transposase
PPEFFPBC_00129 1.6e-273 T Nacht domain
PPEFFPBC_00130 2.5e-225 capA M Bacterial capsule synthesis protein
PPEFFPBC_00131 6.1e-39 gcvR T UPF0237 protein
PPEFFPBC_00132 8.7e-243 XK27_08635 S UPF0210 protein
PPEFFPBC_00133 5.4e-135 ais G Phosphoglycerate mutase
PPEFFPBC_00134 7.9e-143 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
PPEFFPBC_00135 3.6e-100 acmA 3.2.1.17 NU amidase activity
PPEFFPBC_00136 3.5e-194 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PPEFFPBC_00137 1.9e-69 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PPEFFPBC_00138 8.4e-281 dnaK O Heat shock 70 kDa protein
PPEFFPBC_00139 1.3e-183 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PPEFFPBC_00140 3.2e-138 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PPEFFPBC_00141 1.4e-136 thiD 2.7.1.35, 2.7.1.49, 2.7.4.7 H phosphomethylpyrimidine kinase
PPEFFPBC_00142 3.3e-72 hmpT S cog cog4720
PPEFFPBC_00143 1.6e-77 sigH K DNA-templated transcription, initiation
PPEFFPBC_00144 1.6e-146 ykuT M mechanosensitive ion channel
PPEFFPBC_00145 1.4e-218 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PPEFFPBC_00146 4.8e-73 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PPEFFPBC_00147 7.6e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PPEFFPBC_00148 4.2e-83 XK27_03960 S Protein of unknown function (DUF3013)
PPEFFPBC_00149 1.3e-70 mutT3 3.6.1.13, 3.6.1.55 L NUDIX domain
PPEFFPBC_00150 1.3e-176 prmA J Ribosomal protein L11 methyltransferase
PPEFFPBC_00151 3.7e-134 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PPEFFPBC_00152 1.5e-35 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PPEFFPBC_00153 8.6e-45 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PPEFFPBC_00154 2.1e-21 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PPEFFPBC_00155 1e-241 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PPEFFPBC_00156 5.3e-83 nrdI F Belongs to the NrdI family
PPEFFPBC_00157 7.5e-247 L Uncharacterised protein family (UPF0236)
PPEFFPBC_00158 2e-15
PPEFFPBC_00159 9.9e-21
PPEFFPBC_00160 5e-148 D plasmid maintenance
PPEFFPBC_00161 1.9e-53
PPEFFPBC_00162 5.1e-219 NU CHAP domain
PPEFFPBC_00163 1.2e-23
PPEFFPBC_00164 0.0 trsE S COG0433 Predicted ATPase
PPEFFPBC_00165 9.4e-86
PPEFFPBC_00166 5e-13 S Uncharacterized protein pXO2-11
PPEFFPBC_00167 1.2e-29 S BRCA1 C Terminus (BRCT) domain
PPEFFPBC_00168 2.3e-213
PPEFFPBC_00169 3.9e-28
PPEFFPBC_00170 0.0 U COG3505 Type IV secretory pathway, VirD4 components
PPEFFPBC_00171 6.1e-12
PPEFFPBC_00172 5.6e-66 L single-stranded DNA binding
PPEFFPBC_00173 9.9e-26 M LPXTG cell wall anchor motif
PPEFFPBC_00174 1.8e-13 dnaX 2.4.99.16, 2.7.7.7 GH13 D cell septum assembly
PPEFFPBC_00175 9.1e-158
PPEFFPBC_00176 4.2e-32
PPEFFPBC_00177 1e-310 clpB O Belongs to the ClpA ClpB family
PPEFFPBC_00178 1.7e-307 topB 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PPEFFPBC_00179 0.0 EL Toprim-like
PPEFFPBC_00180 6.3e-17
PPEFFPBC_00181 0.0 ruvB 3.6.4.12 L four-way junction helicase activity
PPEFFPBC_00182 3.8e-91
PPEFFPBC_00183 3.4e-37
PPEFFPBC_00184 1.8e-134 ada 3.2.2.21 F DNA/RNA non-specific endonuclease
PPEFFPBC_00185 2e-34 S the current gene model (or a revised gene model) may contain a frame shift
PPEFFPBC_00186 1.7e-22 S the current gene model (or a revised gene model) may contain a frame shift
PPEFFPBC_00189 1.9e-93
PPEFFPBC_00191 5.3e-15
PPEFFPBC_00192 8e-39 S Thioredoxin
PPEFFPBC_00193 1.7e-40
PPEFFPBC_00194 1.2e-18
PPEFFPBC_00196 4.8e-258 repE K Primase C terminal 1 (PriCT-1)
PPEFFPBC_00200 2.8e-93 S Protein of unknown function (DUF2786)
PPEFFPBC_00203 9.1e-49
PPEFFPBC_00204 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PPEFFPBC_00205 3.3e-74 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PPEFFPBC_00206 2e-08 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
PPEFFPBC_00207 3e-28 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
PPEFFPBC_00208 2.3e-18 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
PPEFFPBC_00209 7e-38 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
PPEFFPBC_00210 8.7e-237 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PPEFFPBC_00211 1.2e-111 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PPEFFPBC_00212 4.4e-112 fnr5 K Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
PPEFFPBC_00213 7.9e-200 yhjX P Major Facilitator
PPEFFPBC_00214 9.2e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PPEFFPBC_00215 5e-94 V VanZ like family
PPEFFPBC_00218 1e-123 glnQ E abc transporter atp-binding protein
PPEFFPBC_00219 1.8e-276 glnP P ABC transporter
PPEFFPBC_00220 9.1e-153 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PPEFFPBC_00221 8.3e-134 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PPEFFPBC_00222 3e-183 tagO 2.7.8.33, 2.7.8.35 M transferase
PPEFFPBC_00223 9.5e-144 sufC O ABC-type transport system involved in Fe-S cluster assembly, ATPase component
PPEFFPBC_00224 6.3e-235 sufD O assembly protein SufD
PPEFFPBC_00225 2.3e-237 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PPEFFPBC_00226 2.5e-74 nifU C SUF system FeS assembly protein, NifU family
PPEFFPBC_00227 1.5e-272 sufB O assembly protein SufB
PPEFFPBC_00228 9.7e-19 oppA E ABC transporter substrate-binding protein
PPEFFPBC_00229 1.6e-124 oppA E ABC transporter substrate-binding protein
PPEFFPBC_00230 8.5e-28 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PPEFFPBC_00232 2.5e-09 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PPEFFPBC_00233 1.4e-38 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PPEFFPBC_00234 3e-27 oppD P Belongs to the ABC transporter superfamily
PPEFFPBC_00235 2.5e-32 oppD P Belongs to the ABC transporter superfamily
PPEFFPBC_00236 1.1e-68 oppD P Belongs to the ABC transporter superfamily
PPEFFPBC_00237 1.1e-43 oppD P Belongs to the ABC transporter superfamily
PPEFFPBC_00238 2.2e-61 oppF P Belongs to the ABC transporter superfamily
PPEFFPBC_00239 1.4e-87 oppF P Belongs to the ABC transporter superfamily
PPEFFPBC_00241 7.4e-10
PPEFFPBC_00242 1.9e-158 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PPEFFPBC_00243 7.4e-183 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PPEFFPBC_00244 9.3e-110 K sequence-specific DNA binding
PPEFFPBC_00245 7.5e-42 KLT serine threonine protein kinase
PPEFFPBC_00246 0.0 KLT serine threonine protein kinase
PPEFFPBC_00247 1.9e-223 EGP Major facilitator Superfamily
PPEFFPBC_00248 3.1e-72 adcR K transcriptional
PPEFFPBC_00249 2.2e-136 adcC P ABC transporter, ATP-binding protein
PPEFFPBC_00250 1.9e-128 adcB P ABC transporter (Permease
PPEFFPBC_00251 2.1e-163 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
PPEFFPBC_00252 1.3e-64 ptsG 2.7.1.199, 2.7.1.208 G pts system
PPEFFPBC_00253 9.2e-25 ptsG 2.7.1.199, 2.7.1.208 G pts system
PPEFFPBC_00254 4.2e-257 ptsG 2.7.1.199, 2.7.1.208 G pts system
PPEFFPBC_00255 9.8e-157 rgfB 3.1.3.90 L Endonuclease/Exonuclease/phosphatase family
PPEFFPBC_00256 3.4e-255 pgi 5.3.1.9 G Belongs to the GPI family
PPEFFPBC_00257 1.2e-126 yeeN K transcriptional regulatory protein
PPEFFPBC_00258 9.8e-50 yajC U protein transport
PPEFFPBC_00259 2.4e-141 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PPEFFPBC_00260 5e-145 cdsA 2.7.7.41 S Belongs to the CDS family
PPEFFPBC_00261 1e-229 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PPEFFPBC_00262 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PPEFFPBC_00263 0.0 WQ51_06230 S ABC transporter substrate binding protein
PPEFFPBC_00264 5.2e-142 cmpC S abc transporter atp-binding protein
PPEFFPBC_00265 3.2e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PPEFFPBC_00266 4.1e-287 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PPEFFPBC_00267 1.6e-83 L Transposase
PPEFFPBC_00268 7.2e-104 L Transposase
PPEFFPBC_00269 5.9e-28 K Transcriptional regulator
PPEFFPBC_00270 1.7e-36 3.5.2.6 V Beta-lactamase
PPEFFPBC_00271 9.4e-61 S very-long-chain-acyl-CoA dehydrogenase activity
PPEFFPBC_00272 3.9e-71
PPEFFPBC_00273 1.6e-70 nosF V abc transporter atp-binding protein
PPEFFPBC_00274 4.9e-17
PPEFFPBC_00275 2.4e-135 V ABC transporter
PPEFFPBC_00276 1.9e-107 CP ABC-2 family transporter protein
PPEFFPBC_00277 5e-135 1.6.5.5 C NADPH:quinone reductase activity
PPEFFPBC_00278 1.4e-19 L Transposase
PPEFFPBC_00279 1.7e-85 L the current gene model (or a revised gene model) may contain a frame shift
PPEFFPBC_00282 5.3e-16
PPEFFPBC_00283 1.7e-54 S TM2 domain
PPEFFPBC_00284 3.1e-164 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PPEFFPBC_00285 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PPEFFPBC_00286 3.3e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PPEFFPBC_00287 2.2e-24 secE U Belongs to the SecE SEC61-gamma family
PPEFFPBC_00288 8.4e-96 nusG K Participates in transcription elongation, termination and antitermination
PPEFFPBC_00289 6.9e-50 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I phosphatidate phosphatase activity
PPEFFPBC_00290 4e-47 cof Q phosphatase activity
PPEFFPBC_00291 2.1e-35 cof Q phosphatase activity
PPEFFPBC_00292 8.7e-99 glcR K transcriptional regulator (DeoR family)
PPEFFPBC_00293 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PPEFFPBC_00294 6.6e-28 S COG1073 Hydrolases of the alpha beta superfamily
PPEFFPBC_00295 6.5e-67 S COG1073 Hydrolases of the alpha beta superfamily
PPEFFPBC_00296 3.2e-275 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PPEFFPBC_00297 1.1e-150 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PPEFFPBC_00298 1.1e-69 yhaI L Membrane
PPEFFPBC_00299 5.4e-253 pepC 3.4.22.40 E aminopeptidase
PPEFFPBC_00300 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PPEFFPBC_00301 9.6e-109 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PPEFFPBC_00302 3.1e-95 ypsA S Belongs to the UPF0398 family
PPEFFPBC_00303 5.1e-51 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PPEFFPBC_00304 3.3e-222 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PPEFFPBC_00305 1.7e-305 mapZ D Early cell division protein that marks the future cell division site and supports proper FtsZ ring positioning
PPEFFPBC_00306 0.0 snf 2.7.11.1 L Superfamily II DNA RNA helicases, SNF2 family'
PPEFFPBC_00307 2.5e-23
PPEFFPBC_00308 2.6e-255 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PPEFFPBC_00309 7.3e-80 XK27_09675 K -acetyltransferase
PPEFFPBC_00310 0.0 mltG ADL Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PPEFFPBC_00311 1.6e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PPEFFPBC_00312 7.1e-46 L Integrase core domain protein
PPEFFPBC_00313 1.6e-32 L Integrase core domain protein
PPEFFPBC_00314 2.9e-165 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PPEFFPBC_00315 6e-45 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PPEFFPBC_00316 1.9e-130 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PPEFFPBC_00317 4.7e-93 XK27_09705 6.1.1.14 S HD superfamily hydrolase
PPEFFPBC_00318 1.5e-97 ybhL S Belongs to the BI1 family
PPEFFPBC_00321 2.8e-243 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PPEFFPBC_00322 6.9e-90 K transcriptional regulator
PPEFFPBC_00323 7.6e-36 yneF S UPF0154 protein
PPEFFPBC_00324 3.8e-148 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PPEFFPBC_00325 7.1e-186 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PPEFFPBC_00326 3.5e-99 XK27_09740 S Phosphoesterase
PPEFFPBC_00327 2.1e-85 ykuL S CBS domain
PPEFFPBC_00328 2.8e-137 xerD L tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site
PPEFFPBC_00329 1.5e-121 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PPEFFPBC_00330 3e-99 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PPEFFPBC_00331 1.6e-140 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PPEFFPBC_00332 4e-40 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PPEFFPBC_00333 4.8e-255 trkH P Cation transport protein
PPEFFPBC_00334 1.4e-245 trkA P Potassium transporter peripheral membrane component
PPEFFPBC_00335 1.6e-96 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PPEFFPBC_00336 6.4e-91 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PPEFFPBC_00337 6.5e-111 bcrC 3.6.1.27 I Membrane-associated phospholipid phosphatase
PPEFFPBC_00338 5.6e-161 K sequence-specific DNA binding
PPEFFPBC_00339 2.1e-32 V protein secretion by the type I secretion system
PPEFFPBC_00340 5.5e-105 V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PPEFFPBC_00341 4.4e-56 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PPEFFPBC_00342 1.6e-84 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PPEFFPBC_00343 2.8e-28 yhaI L Membrane
PPEFFPBC_00344 4.5e-56 S Domain of unknown function (DUF4173)
PPEFFPBC_00345 1.2e-94 ureI S AmiS/UreI family transporter
PPEFFPBC_00346 7.6e-46 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
PPEFFPBC_00347 3e-53 ureB 3.5.1.5 E Belongs to the urease beta subunit family
PPEFFPBC_00348 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
PPEFFPBC_00349 6.6e-78 ureE O enzyme active site formation
PPEFFPBC_00350 5.3e-130 ureF O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
PPEFFPBC_00351 9.5e-112 ureG KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
PPEFFPBC_00352 3.7e-159 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
PPEFFPBC_00353 3.9e-176 cbiM P PDGLE domain
PPEFFPBC_00354 4.9e-137 P cobalt transport protein
PPEFFPBC_00355 1.6e-131 cbiO P ABC transporter
PPEFFPBC_00356 3e-148 ET amino acid transport
PPEFFPBC_00357 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PPEFFPBC_00358 0.0 3.3.1.1, 3.6.1.55, 3.6.1.67 F NUDIX domain
PPEFFPBC_00359 3.8e-205 EGP Transmembrane secretion effector
PPEFFPBC_00360 4.5e-144 ET amino acid transport
PPEFFPBC_00361 5.8e-158 metQ M Belongs to the NlpA lipoprotein family
PPEFFPBC_00362 5.4e-256 dapE 3.5.1.18 E COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases
PPEFFPBC_00363 2e-181 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PPEFFPBC_00364 2e-97 metI P ABC transporter (Permease
PPEFFPBC_00365 6.1e-211 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
PPEFFPBC_00366 5.5e-158 salL 2.5.1.63, 2.5.1.94 S S-adenosyl-l-methionine hydroxide adenosyltransferase
PPEFFPBC_00367 8e-94 S UPF0397 protein
PPEFFPBC_00368 0.0 ykoD P abc transporter atp-binding protein
PPEFFPBC_00369 1.2e-149 cbiQ P cobalt transport
PPEFFPBC_00370 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PPEFFPBC_00371 1.4e-11 ulaG S L-ascorbate 6-phosphate lactonase
PPEFFPBC_00372 1.9e-121 ktrA P COG0569 K transport systems, NAD-binding component
PPEFFPBC_00373 3.4e-242 P COG0168 Trk-type K transport systems, membrane components
PPEFFPBC_00374 9e-130 rsmG 2.1.1.170 J Ribosomal RNA small subunit methyltransferase G
PPEFFPBC_00375 1.1e-90 yceD K metal-binding, possibly nucleic acid-binding protein
PPEFFPBC_00376 3.9e-122 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PPEFFPBC_00377 3e-276 T PhoQ Sensor
PPEFFPBC_00378 1e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PPEFFPBC_00379 1.9e-217 dnaB L Replication initiation and membrane attachment
PPEFFPBC_00380 8.9e-167 dnaI L Primosomal protein DnaI
PPEFFPBC_00381 1.5e-244 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PPEFFPBC_00382 6.2e-45 yrdC 3.5.1.19 Q isochorismatase
PPEFFPBC_00383 1.4e-27 yrdC 3.5.1.19 Q isochorismatase
PPEFFPBC_00384 8.6e-232 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PPEFFPBC_00385 4.2e-62 manO S protein conserved in bacteria
PPEFFPBC_00386 1.8e-167 manN G PTS system mannose fructose sorbose family IID component
PPEFFPBC_00387 1.5e-115 manM G pts system
PPEFFPBC_00388 2.4e-173 manL 2.7.1.191 G pts system
PPEFFPBC_00389 2.4e-138 XK27_00940 1.2.1.70, 3.5.1.9 S Metal-dependent hydrolase
PPEFFPBC_00390 5.6e-152 yitU 3.1.3.104 S hydrolases of the HAD superfamily
PPEFFPBC_00391 8.6e-241 pbuO S permease
PPEFFPBC_00392 1.4e-77 ydiB 2.7.1.221, 5.1.1.1 M ATPase or kinase
PPEFFPBC_00393 3.2e-92 XK27_05885 2.3.1.82 M Acetyltransferase GNAT Family
PPEFFPBC_00394 1.5e-217 brpA K Transcriptional
PPEFFPBC_00395 3.9e-81 rimP S Required for maturation of 30S ribosomal subunits
PPEFFPBC_00396 3.1e-212 nusA K Participates in both transcription termination and antitermination
PPEFFPBC_00397 3e-47 ylxR K Nucleic-acid-binding protein implicated in transcription termination
PPEFFPBC_00398 1.4e-41 ylxQ J ribosomal protein
PPEFFPBC_00399 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PPEFFPBC_00400 6.6e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PPEFFPBC_00401 3.8e-73 yvdD 3.2.2.10 S Belongs to the LOG family
PPEFFPBC_00403 5.9e-225 femA 2.3.2.10, 2.3.2.16, 2.3.2.17, 2.3.2.18 V protein involved in methicillin resistance
PPEFFPBC_00404 7.9e-274 murE 6.3.2.13, 6.3.2.7 M to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PPEFFPBC_00405 1e-282 ytgP S Membrane protein involved in the export of O-antigen and teichoic acid
PPEFFPBC_00406 2.3e-91 pacL 3.6.3.8, 3.6.3.9 P cation transport ATPase
PPEFFPBC_00407 1.1e-200 metB 2.5.1.48, 4.4.1.8 E cystathionine
PPEFFPBC_00408 2.8e-221 malY 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PPEFFPBC_00409 8e-10 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 G Belongs to the glycosyl hydrolase 68 family
PPEFFPBC_00410 4.4e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PPEFFPBC_00411 8.3e-105 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PPEFFPBC_00412 1.3e-73 ylbF S Belongs to the UPF0342 family
PPEFFPBC_00413 7.1e-46 ylbG S UPF0298 protein
PPEFFPBC_00414 9.1e-212 livJ E COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component
PPEFFPBC_00415 2.1e-144 livH E Belongs to the binding-protein-dependent transport system permease family
PPEFFPBC_00416 1.4e-138 livM E Belongs to the binding-protein-dependent transport system permease family
PPEFFPBC_00417 9.6e-138 livG E COG0411 ABC-type branched-chain amino acid transport systems, ATPase component
PPEFFPBC_00418 4.8e-123 livF E COG0410 ABC-type branched-chain amino acid transport systems, ATPase component
PPEFFPBC_00419 1e-39 acuB S CBS domain
PPEFFPBC_00420 9.3e-42 acuB S IMP dehydrogenase activity
PPEFFPBC_00421 1.1e-167 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PPEFFPBC_00422 6.3e-111 yvyE 3.4.13.9 S YigZ family
PPEFFPBC_00423 2e-252 comFA L Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
PPEFFPBC_00424 4.9e-122 comFC S Competence protein
PPEFFPBC_00425 2.4e-90 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PPEFFPBC_00426 3.5e-166 ppaC 3.6.1.1 C inorganic pyrophosphatase
PPEFFPBC_00427 7.2e-117 S Domain of unknown function (DUF1803)
PPEFFPBC_00428 7.8e-102 ygaC J Belongs to the UPF0374 family
PPEFFPBC_00429 7.3e-133 recX 2.4.1.337 GT4 S Regulatory protein RecX
PPEFFPBC_00430 6.7e-259 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PPEFFPBC_00431 6.7e-192 asnA 6.3.1.1 E aspartate--ammonia ligase
PPEFFPBC_00432 2e-255 lysC 2.7.2.4 E Belongs to the aspartokinase family
PPEFFPBC_00433 2.8e-114 S Haloacid dehalogenase-like hydrolase
PPEFFPBC_00434 9e-139 phaB 5.3.3.14, 5.3.3.18 I Belongs to the enoyl-CoA hydratase isomerase family
PPEFFPBC_00435 5.2e-72 marR K Transcriptional regulator, MarR family
PPEFFPBC_00436 2.3e-173 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PPEFFPBC_00437 2.6e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PPEFFPBC_00438 6.8e-173 fabK 1.3.1.9 S 2-Nitropropane dioxygenase
PPEFFPBC_00439 1.9e-164 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
PPEFFPBC_00440 1.6e-126 IQ reductase
PPEFFPBC_00441 1.5e-233 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PPEFFPBC_00442 7e-57 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PPEFFPBC_00443 4.3e-71 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PPEFFPBC_00444 1.4e-256 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
PPEFFPBC_00445 1.1e-158 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PPEFFPBC_00446 4.4e-138 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
PPEFFPBC_00447 2.3e-89 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PPEFFPBC_00448 1.3e-205 rny D Endoribonuclease that initiates mRNA decay
PPEFFPBC_00449 1.8e-84 L Transposase
PPEFFPBC_00450 1.2e-121 fruR K transcriptional
PPEFFPBC_00451 3.8e-165 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PPEFFPBC_00452 0.0 fruA 2.7.1.202 G phosphotransferase system
PPEFFPBC_00453 7.9e-260 gor 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PPEFFPBC_00454 4.5e-241 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PPEFFPBC_00456 5.7e-211 iscS2 2.8.1.7 E Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes
PPEFFPBC_00457 2.3e-226 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PPEFFPBC_00458 4.9e-295 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
PPEFFPBC_00459 1e-256 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
PPEFFPBC_00460 4.9e-39 2.3.1.128 K acetyltransferase
PPEFFPBC_00461 6.4e-29 2.3.1.128 K acetyltransferase
PPEFFPBC_00462 4.5e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
PPEFFPBC_00463 1.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PPEFFPBC_00464 1.5e-121 ydaF_2 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PPEFFPBC_00465 2.6e-64 WQ51_03320 S cog cog4835
PPEFFPBC_00466 4.4e-09 XK27_08360 S EDD domain protein, DegV family
PPEFFPBC_00467 2.2e-120 XK27_08360 S EDD domain protein, DegV family
PPEFFPBC_00468 1.1e-138 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PPEFFPBC_00469 2.6e-222 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PPEFFPBC_00470 0.0 yfmR S abc transporter atp-binding protein
PPEFFPBC_00471 3.3e-25 U response to pH
PPEFFPBC_00472 3e-139 3.6.1.13, 3.6.1.55 F AdP-ribose pyrophosphatase
PPEFFPBC_00473 1.8e-195 nadD 2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55 H adenylyltransferase
PPEFFPBC_00474 2e-255 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
PPEFFPBC_00475 8.7e-69 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PPEFFPBC_00476 1.6e-76 K DNA-binding transcription factor activity
PPEFFPBC_00477 0.0 lmrA1 V abc transporter atp-binding protein
PPEFFPBC_00478 0.0 lmrA2 V abc transporter atp-binding protein
PPEFFPBC_00479 1.4e-45 K Acetyltransferase (GNAT) family
PPEFFPBC_00480 4.5e-77 sptS 2.7.13.3 T Histidine kinase
PPEFFPBC_00481 4.9e-131 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PPEFFPBC_00482 1.3e-91 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PPEFFPBC_00483 5.3e-161 cvfB S Protein conserved in bacteria
PPEFFPBC_00484 7.4e-35 yozE S Belongs to the UPF0346 family
PPEFFPBC_00485 2.1e-116 usp 3.5.1.104, 3.5.1.28 CBM50 S pathogenesis
PPEFFPBC_00486 9.4e-41 rlpA M LysM domain protein
PPEFFPBC_00487 3e-190 phoH T phosphate starvation-inducible protein PhoH
PPEFFPBC_00491 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PPEFFPBC_00492 9.2e-164 K transcriptional regulator (lysR family)
PPEFFPBC_00493 1.4e-186 coiA 3.6.4.12 S Competence protein
PPEFFPBC_00494 0.0 pepF E oligoendopeptidase F
PPEFFPBC_00495 4.6e-126 yrrM 2.1.1.104 S O-Methyltransferase
PPEFFPBC_00496 8.6e-167 prsA 3.1.3.16, 5.2.1.8 O peptidyl-prolyl cis-trans isomerase activity
PPEFFPBC_00497 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PPEFFPBC_00498 2.5e-146 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
PPEFFPBC_00499 3.4e-41 3.4.17.14, 3.5.1.28 NU amidase activity
PPEFFPBC_00500 1.3e-30 3.4.17.14, 3.5.1.28 NU amidase activity
PPEFFPBC_00501 4.9e-145 cnhA 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
PPEFFPBC_00502 1.7e-226 mtnE 2.6.1.83 E mutations do not affect methionine salvage in vivo however
PPEFFPBC_00503 1.4e-189 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PPEFFPBC_00504 1.5e-222 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PPEFFPBC_00505 1.2e-129 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
PPEFFPBC_00506 5.3e-209 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
PPEFFPBC_00507 7.2e-129 yxkH G deacetylase
PPEFFPBC_00508 1.5e-236 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
PPEFFPBC_00509 4.2e-150 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PPEFFPBC_00510 1e-151 rarD S Transporter
PPEFFPBC_00511 2.6e-16 T peptidase
PPEFFPBC_00512 8.9e-14 coiA 3.6.4.12 S Competence protein
PPEFFPBC_00513 8.3e-105 S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PPEFFPBC_00514 8.1e-69 2.3.1.128, 5.2.1.8 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PPEFFPBC_00515 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PPEFFPBC_00516 1.4e-16 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PPEFFPBC_00517 1.6e-123 atpB C it plays a direct role in the translocation of protons across the membrane
PPEFFPBC_00518 2.3e-76 atpF C ATP synthase F(0) sector subunit b
PPEFFPBC_00519 1e-85 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PPEFFPBC_00520 3.5e-277 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PPEFFPBC_00521 6.2e-157 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PPEFFPBC_00522 6.1e-263 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PPEFFPBC_00523 2e-52 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PPEFFPBC_00524 2.8e-230 ftsW D Belongs to the SEDS family
PPEFFPBC_00525 9.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PPEFFPBC_00526 1.4e-136 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PPEFFPBC_00527 1.7e-111 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PPEFFPBC_00528 2.7e-160 holB 2.7.7.7 L dna polymerase iii
PPEFFPBC_00529 5.2e-134 yaaT S stage 0 sporulation protein
PPEFFPBC_00530 9.5e-55 yabA L Involved in initiation control of chromosome replication
PPEFFPBC_00531 5e-159 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PPEFFPBC_00532 5.8e-225 amt P Ammonium Transporter
PPEFFPBC_00533 1.8e-51 glnB K Belongs to the P(II) protein family
PPEFFPBC_00534 6e-104 mur1 NU mannosyl-glycoprotein
PPEFFPBC_00535 5.8e-149 XK27_04800 S Sucrose-6F-phosphate phosphohydrolase
PPEFFPBC_00536 4.6e-20 S Bacterial inner membrane protein
PPEFFPBC_00537 2.9e-68 nptA P sodium-dependent phosphate transmembrane transporter activity
PPEFFPBC_00538 3e-220 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PPEFFPBC_00539 4.9e-51
PPEFFPBC_00540 2.2e-25
PPEFFPBC_00541 3.9e-60
PPEFFPBC_00542 5.2e-62 S membrane
PPEFFPBC_00543 4.8e-176 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PPEFFPBC_00544 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PPEFFPBC_00545 4.5e-39 ynzC S UPF0291 protein
PPEFFPBC_00546 6.9e-251 cycA E permease
PPEFFPBC_00547 1.4e-09 uvrX 2.7.7.7 L impB/mucB/samB family
PPEFFPBC_00548 7.4e-25 pts33BCA 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
PPEFFPBC_00549 1.3e-181 pts33BCA G pts system
PPEFFPBC_00550 7.8e-140 ppiA 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PPEFFPBC_00555 1.5e-166 fhuR K transcriptional regulator (lysR family)
PPEFFPBC_00556 2.6e-77 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PPEFFPBC_00557 8.5e-162 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PPEFFPBC_00558 1.1e-87 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PPEFFPBC_00559 4.9e-227 pyrP F uracil Permease
PPEFFPBC_00560 1e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PPEFFPBC_00561 2.1e-210 carA 6.3.5.5 F carbamoyl-phosphate synthetase glutamine chain
PPEFFPBC_00562 0.0 carB 6.3.5.5 F carbamoyl-phosphate synthetase ammonia chain
PPEFFPBC_00563 4.1e-54 2.1.1.223 S Putative SAM-dependent methyltransferase
PPEFFPBC_00565 2.1e-48
PPEFFPBC_00566 6.5e-255 repE K Primase C terminal 1 (PriCT-1)
PPEFFPBC_00567 1.5e-16
PPEFFPBC_00568 6.6e-40
PPEFFPBC_00569 2.2e-36 S Thioredoxin
PPEFFPBC_00570 2.6e-14
PPEFFPBC_00573 8.7e-78
PPEFFPBC_00575 4.6e-23 S the current gene model (or a revised gene model) may contain a frame shift
PPEFFPBC_00576 2.1e-39 S the current gene model (or a revised gene model) may contain a frame shift
PPEFFPBC_00577 1e-110 ada 3.2.2.21 M DNA/RNA non-specific endonuclease
PPEFFPBC_00578 1.1e-27
PPEFFPBC_00579 0.0 ruvB 3.6.4.12 L four-way junction helicase activity
PPEFFPBC_00581 2.2e-17
PPEFFPBC_00582 0.0 EL Toprim-like
PPEFFPBC_00583 1.7e-267 topB 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PPEFFPBC_00584 2.8e-300 clpB O Belongs to the ClpA ClpB family
PPEFFPBC_00585 1.5e-29
PPEFFPBC_00586 1.5e-152
PPEFFPBC_00587 1.2e-31 MU outer membrane autotransporter barrel domain protein
PPEFFPBC_00588 8.5e-57 L single-stranded DNA binding
PPEFFPBC_00589 7.9e-12
PPEFFPBC_00590 0.0 U COG3505 Type IV secretory pathway, VirD4 components
PPEFFPBC_00591 2.5e-27
PPEFFPBC_00592 1.1e-194
PPEFFPBC_00593 1.2e-24 S BRCA1 C Terminus (BRCT) domain
PPEFFPBC_00594 6.4e-93
PPEFFPBC_00595 6.3e-178 K IrrE N-terminal-like domain
PPEFFPBC_00596 1.8e-12 S Uncharacterized protein pXO2-11
PPEFFPBC_00597 8.9e-84
PPEFFPBC_00598 0.0 trsE S COG0433 Predicted ATPase
PPEFFPBC_00599 1.9e-21
PPEFFPBC_00600 3.5e-191 NU amidase activity
PPEFFPBC_00601 5.3e-43
PPEFFPBC_00602 5.8e-133 D plasmid maintenance
PPEFFPBC_00603 3.6e-18
PPEFFPBC_00604 4.7e-09
PPEFFPBC_00605 1.3e-206 S PFAM Uncharacterised protein family UPF0236
PPEFFPBC_00606 2.4e-64 2.1.1.223 S Putative SAM-dependent methyltransferase
PPEFFPBC_00607 4.2e-175 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PPEFFPBC_00608 3.7e-120 macB V ABC transporter, ATP-binding protein
PPEFFPBC_00609 7.1e-212 V permease protein
PPEFFPBC_00610 1.1e-161 L helicase C-terminal domain protein
PPEFFPBC_00611 9.9e-46
PPEFFPBC_00612 4.6e-40
PPEFFPBC_00613 3.1e-105 XK27_10865
PPEFFPBC_00614 5.4e-203 L Toprim-like
PPEFFPBC_00615 1.1e-17 XK27_10875
PPEFFPBC_00616 8.8e-63 XK27_10880
PPEFFPBC_00617 6e-40
PPEFFPBC_00618 1.9e-83 nprA K Cro/C1-type HTH DNA-binding domain
PPEFFPBC_00619 7.2e-133 2.7.1.176 O Zeta toxin
PPEFFPBC_00620 0.0 D PHP domain protein
PPEFFPBC_00621 1.6e-50
PPEFFPBC_00622 4.1e-62 S Bacterial mobilisation protein (MobC)
PPEFFPBC_00623 0.0 U relaxase
PPEFFPBC_00624 5.1e-28 O Belongs to the peptidase S8 family
PPEFFPBC_00625 1.1e-203 O Belongs to the peptidase S8 family
PPEFFPBC_00626 1.6e-126 KT Transcriptional regulatory protein, C terminal
PPEFFPBC_00627 1.9e-245 2.7.13.3 T His Kinase A (phosphoacceptor) domain
PPEFFPBC_00628 5.9e-126 mutF V AAA domain, putative AbiEii toxin, Type IV TA system
PPEFFPBC_00629 1.5e-66 S ABC-2 family transporter protein
PPEFFPBC_00631 2.1e-126
PPEFFPBC_00632 2.9e-69 K Psort location Cytoplasmic, score
PPEFFPBC_00633 0.0 L Recombinase
PPEFFPBC_00634 6e-55 J Acetyltransferase (GNAT) domain
PPEFFPBC_00635 5.7e-95
PPEFFPBC_00636 3.3e-35 L Integrase core domain protein
PPEFFPBC_00637 0.0 L SNF2 family N-terminal domain
PPEFFPBC_00638 6.9e-71 S Domain of unknown function (DUF4391)
PPEFFPBC_00640 2.5e-218 mod 2.1.1.72 L Adenine specific DNA methylase Mod
PPEFFPBC_00642 0.0 res 3.1.21.5 L restriction endonuclease
PPEFFPBC_00643 5.6e-78 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PPEFFPBC_00644 3e-52 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PPEFFPBC_00645 2.8e-117 L Transposase
PPEFFPBC_00646 8.5e-22 L Transposase for ISSha1
PPEFFPBC_00647 2.9e-48 U response to pH
PPEFFPBC_00648 6.5e-108 L Transposase
PPEFFPBC_00649 1.2e-112 L Transposase
PPEFFPBC_00650 1.6e-18 L Integrase core domain
PPEFFPBC_00651 9.4e-75 devA 3.6.3.25 V abc transporter atp-binding protein
PPEFFPBC_00652 2.8e-164 hrtB V MacB-like periplasmic core domain
PPEFFPBC_00655 3e-92 S MucBP domain
PPEFFPBC_00656 5.9e-51 M YSIRK type signal peptide
PPEFFPBC_00657 0.0 M the current gene model (or a revised gene model) may contain a
PPEFFPBC_00659 0.0 mdlB V abc transporter atp-binding protein
PPEFFPBC_00660 0.0 lmrA V abc transporter atp-binding protein
PPEFFPBC_00661 4.6e-199 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PPEFFPBC_00662 3.4e-121 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PPEFFPBC_00663 1.3e-214 2.7.13.3 T signal transduction protein with a C-terminal ATPase domain
PPEFFPBC_00664 2.1e-131 rr02 KT response regulator
PPEFFPBC_00665 1.9e-219 2.7.7.73, 2.7.7.80 H Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
PPEFFPBC_00666 4.8e-168 V ABC transporter
PPEFFPBC_00667 5.4e-122 sagI S ABC-2 type transporter
PPEFFPBC_00668 5.8e-196 yceA S Belongs to the UPF0176 family
PPEFFPBC_00669 1e-27 XK27_00085 K Transcriptional
PPEFFPBC_00670 2.7e-24
PPEFFPBC_00671 2.8e-145 deoD_1 2.4.2.3 F Phosphorylase superfamily
PPEFFPBC_00672 5.6e-113 S VIT family
PPEFFPBC_00673 3.3e-132 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PPEFFPBC_00674 2.4e-217 hipO 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
PPEFFPBC_00675 3.4e-17 ald 1.4.1.1 E alanine dehydrogenase activity
PPEFFPBC_00676 9.1e-48 ald 1.4.1.1 C Belongs to the AlaDH PNT family
PPEFFPBC_00677 2.6e-247 merA 1.16.1.1 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PPEFFPBC_00678 8.8e-104 GBS0088 J protein conserved in bacteria
PPEFFPBC_00679 2.5e-142 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
PPEFFPBC_00680 6e-174 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PPEFFPBC_00681 1e-176 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I GHMP kinases N terminal domain
PPEFFPBC_00682 6.2e-185 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PPEFFPBC_00683 1.8e-251 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PPEFFPBC_00684 1e-96 nudF 3.6.1.13 L AdP-ribose pyrophosphatase
PPEFFPBC_00685 2.5e-21
PPEFFPBC_00686 2e-118 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PPEFFPBC_00688 3e-29 U protein secretion
PPEFFPBC_00689 1.8e-49 U protein secretion
PPEFFPBC_00690 2.5e-08 M Pilin isopeptide linkage domain protein
PPEFFPBC_00691 7.6e-191 dgs 2.4.1.208 GT4 M Glycosyltransferase, group 1 family protein
PPEFFPBC_00692 3.4e-247 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
PPEFFPBC_00693 3.5e-49 XK27_13030
PPEFFPBC_00694 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PPEFFPBC_00695 2.4e-170 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
PPEFFPBC_00696 9.8e-163 S Protein of unknown function (DUF3114)
PPEFFPBC_00697 1.2e-22 S Protein of unknown function (DUF3114)
PPEFFPBC_00698 4.7e-120 yqfA K protein, Hemolysin III
PPEFFPBC_00699 1e-25 K hmm pf08876
PPEFFPBC_00700 9.4e-231 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PPEFFPBC_00701 1.7e-218 mvaS 2.3.3.10 I synthase
PPEFFPBC_00702 1.9e-166 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PPEFFPBC_00703 5.3e-92 folA 1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PPEFFPBC_00704 9.7e-22
PPEFFPBC_00705 3.7e-224 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PPEFFPBC_00706 3e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
PPEFFPBC_00707 1.4e-248 mmuP E amino acid
PPEFFPBC_00708 7.7e-177 mmuM 1.5.1.20, 2.1.1.10 H Homocysteine
PPEFFPBC_00709 1.4e-29 S Domain of unknown function (DUF1912)
PPEFFPBC_00710 8.3e-15 L Helix-hairpin-helix DNA-binding motif class 1
PPEFFPBC_00711 1.6e-101 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PPEFFPBC_00712 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PPEFFPBC_00713 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PPEFFPBC_00714 3.4e-199 ilvE 2.6.1.42 E Aminotransferase
PPEFFPBC_00715 1.1e-15 S Protein of unknown function (DUF2969)
PPEFFPBC_00718 1.3e-202 rpsA 1.17.7.4 J ribosomal protein S1
PPEFFPBC_00721 2.6e-101 S Domain of Unknown Function with PDB structure (DUF3862)
PPEFFPBC_00722 2.9e-63 M Pfam SNARE associated Golgi protein
PPEFFPBC_00723 1.3e-232 murN 2.3.2.10, 2.3.2.16 V FemAB family
PPEFFPBC_00724 3e-51 S oxidoreductase
PPEFFPBC_00725 1.4e-54 S oxidoreductase
PPEFFPBC_00726 2.4e-47 XK27_09445 S Domain of unknown function (DUF1827)
PPEFFPBC_00727 5.7e-85 mutT 3.5.4.33, 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
PPEFFPBC_00728 0.0 clpE O Belongs to the ClpA ClpB family
PPEFFPBC_00729 3.1e-181 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PPEFFPBC_00730 1.3e-34 ykuJ S protein conserved in bacteria
PPEFFPBC_00731 7.5e-118 WQ51_01820 P Binding-protein-dependent transport system inner membrane component
PPEFFPBC_00732 2.2e-131 glnQ 3.6.3.21 E abc transporter atp-binding protein
PPEFFPBC_00733 3.1e-78 feoA P FeoA domain protein
PPEFFPBC_00734 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
PPEFFPBC_00735 1.5e-07
PPEFFPBC_00736 1.9e-33 yugF I carboxylic ester hydrolase activity
PPEFFPBC_00737 1.5e-23 I Alpha/beta hydrolase family
PPEFFPBC_00738 2.7e-157 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PPEFFPBC_00739 5e-148 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PPEFFPBC_00740 0.0 pbp2b 3.4.16.4 M penicillin-binding protein
PPEFFPBC_00741 2.2e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PPEFFPBC_00743 1e-41 licT K transcriptional antiterminator
PPEFFPBC_00744 6.8e-53 licT K transcriptional antiterminator
PPEFFPBC_00745 5.9e-88 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PPEFFPBC_00746 1.1e-63 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
PPEFFPBC_00747 1.3e-165 era M An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PPEFFPBC_00748 1.9e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PPEFFPBC_00749 1.3e-105 coaE 2.7.1.24, 3.2.2.23, 4.2.99.18 GH23 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PPEFFPBC_00750 1.6e-219 mdtG EGP Major facilitator Superfamily
PPEFFPBC_00751 2.6e-33 secG U Preprotein translocase subunit SecG
PPEFFPBC_00752 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PPEFFPBC_00753 1.1e-80 smpB O the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PPEFFPBC_00754 2.1e-276 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PPEFFPBC_00755 1.7e-63 yugI 5.3.1.9 J RNA binding protein, contains ribosomal protein S1 domain
PPEFFPBC_00756 2.7e-210 pepQ 3.4.13.9 E Belongs to the peptidase M24B family
PPEFFPBC_00757 3.7e-182 ccpA K Catabolite control protein A
PPEFFPBC_00758 5.2e-27 yyaQ S YjbR
PPEFFPBC_00759 2.9e-111 yyaQ S YjbR
PPEFFPBC_00760 2.9e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PPEFFPBC_00761 1.1e-77 yueI S Protein of unknown function (DUF1694)
PPEFFPBC_00762 8.2e-246 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PPEFFPBC_00763 1.3e-24 WQ51_00785
PPEFFPBC_00764 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
PPEFFPBC_00765 9e-220 ywbD 2.1.1.191 J Methyltransferase
PPEFFPBC_00766 8.6e-122 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PPEFFPBC_00767 1.5e-160 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PPEFFPBC_00768 2.9e-201 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PPEFFPBC_00769 4.5e-219 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PPEFFPBC_00770 1.4e-206 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
PPEFFPBC_00771 3.2e-53 yheA S Belongs to the UPF0342 family
PPEFFPBC_00772 8.8e-173 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PPEFFPBC_00773 7.1e-234 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PPEFFPBC_00774 2.5e-86 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PPEFFPBC_00775 2.5e-152 pheA 4.2.1.51 E Prephenate dehydratase
PPEFFPBC_00776 2e-237 msrR K Transcriptional regulator
PPEFFPBC_00777 4.3e-156 ydiA P C4-dicarboxylate transporter malic acid transport protein
PPEFFPBC_00778 2.4e-203 I acyl-CoA dehydrogenase
PPEFFPBC_00779 4.5e-97 mip S hydroperoxide reductase activity
PPEFFPBC_00780 3.1e-248 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PPEFFPBC_00781 9.8e-22
PPEFFPBC_00782 7.9e-138 repA S Replication initiator protein A (RepA) N-terminus
PPEFFPBC_00783 1e-259 hpaIIM 2.1.1.37 H cytosine-specific methyltransferase
PPEFFPBC_00784 2.6e-76 XK27_00590
PPEFFPBC_00785 3e-63 XK27_00585 P arsenate reductase (glutaredoxin) activity
PPEFFPBC_00786 5.9e-38 XK27_00580
PPEFFPBC_00787 6.5e-94 ypbD S CAAX protease self-immunity
PPEFFPBC_00788 7.2e-78 XK27_00570
PPEFFPBC_00789 0.0 traG U COG3505 Type IV secretory pathway, VirD4 components
PPEFFPBC_00790 5.4e-34 XK27_00560
PPEFFPBC_00791 1.1e-139 XK27_00555
PPEFFPBC_00792 3.4e-61 XK27_00550 S PrgI family protein
PPEFFPBC_00793 0.0 XK27_00545 U 'COG3451 Type IV secretory pathway, VirB4 components'
PPEFFPBC_00794 0.0 XK27_00530 M CHAP domain protein
PPEFFPBC_00795 5.3e-153 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
PPEFFPBC_00796 9.5e-109 abiGI K Transcriptional regulator, AbiEi antitoxin
PPEFFPBC_00797 0.0 XK27_00515 D Glucan-binding protein C
PPEFFPBC_00798 4.1e-13 XK27_00510
PPEFFPBC_00799 6e-89 XK27_00505
PPEFFPBC_00800 0.0 XK27_00500 L the current gene model (or a revised gene model) may contain a
PPEFFPBC_00801 6.7e-68 S Psort location Cytoplasmic, score 8.87
PPEFFPBC_00802 0.0 tetP J elongation factor G
PPEFFPBC_00803 1.3e-176 aadK G Streptomycin adenylyltransferase
PPEFFPBC_00804 8.7e-93 yyaR K Acetyltransferase (GNAT) domain
PPEFFPBC_00805 1e-153 ymdC 2.7.1.87, 2.7.1.95 J Phosphotransferase enzyme family
PPEFFPBC_00806 1.4e-101 yobV K WYL domain
PPEFFPBC_00808 1.2e-104 MA20_21040 1.1.1.193, 1.1.1.302, 3.5.4.26 H RibD C-terminal domain
PPEFFPBC_00809 5.3e-59 L COG2801 Transposase and inactivated derivatives
PPEFFPBC_00810 8.9e-11
PPEFFPBC_00811 7.8e-59 S Protein of unknown function (DUF1722)
PPEFFPBC_00812 3.3e-64 yqeB S Pyrimidine dimer DNA glycosylase
PPEFFPBC_00814 2.4e-33
PPEFFPBC_00815 1.7e-26 S CAAX protease self-immunity
PPEFFPBC_00816 1e-30 S CAAX protease self-immunity
PPEFFPBC_00817 1.9e-27 estA E GDSL-like Lipase/Acylhydrolase
PPEFFPBC_00818 2.1e-95
PPEFFPBC_00819 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PPEFFPBC_00820 1.1e-172 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PPEFFPBC_00821 3.1e-53 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PPEFFPBC_00822 1.8e-187 S CRISPR-associated protein Csn2 subfamily St
PPEFFPBC_00823 1.3e-148 ycgQ S TIGR03943 family
PPEFFPBC_00824 1.7e-157 XK27_03015 S permease
PPEFFPBC_00826 0.0 yhgF K Transcriptional accessory protein
PPEFFPBC_00827 6.4e-41 pspC KT PspC domain
PPEFFPBC_00828 4.9e-168 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PPEFFPBC_00829 9e-147 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PPEFFPBC_00831 1.2e-68 ytxH S General stress protein
PPEFFPBC_00833 3.7e-176 yegQ O Peptidase U32
PPEFFPBC_00834 3.4e-252 yegQ O Peptidase U32
PPEFFPBC_00835 3.2e-87 bioY S biotin synthase
PPEFFPBC_00837 1.1e-33 XK27_12190 S protein conserved in bacteria
PPEFFPBC_00838 3e-235 mntH P H( )-stimulated, divalent metal cation uptake system
PPEFFPBC_00840 3.5e-285 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PPEFFPBC_00841 1.9e-15 M LysM domain
PPEFFPBC_00842 2.4e-58 M LysM domain
PPEFFPBC_00843 1.8e-20
PPEFFPBC_00844 6.4e-173 S hydrolase
PPEFFPBC_00845 1.1e-115 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase
PPEFFPBC_00846 7.9e-82 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PPEFFPBC_00847 7e-146 XK27_00880 3.5.1.28 M Glycosyl hydrolase, family 25
PPEFFPBC_00848 2.7e-27 P Hemerythrin HHE cation binding domain protein
PPEFFPBC_00849 4.8e-111 1.14.14.5 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PPEFFPBC_00850 8e-18 MA20_36090 S Protein of unknown function (DUF2974)
PPEFFPBC_00851 5.6e-98 sdh 1.1.1.276, 1.1.1.313, 1.1.1.381 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PPEFFPBC_00852 1.2e-213 hsdR 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
PPEFFPBC_00853 7.1e-64 prrC S AAA domain
PPEFFPBC_00854 3.4e-126 hsdS 3.1.21.3 V type I restriction modification DNA specificity domain protein
PPEFFPBC_00855 1e-42 K Helix-turn-helix domain
PPEFFPBC_00856 3.6e-304 hsdM 2.1.1.72 V type I restriction-modification system
PPEFFPBC_00857 6.6e-35 S PD-(D/E)XK nuclease family transposase
PPEFFPBC_00858 2.6e-24 S double-stranded DNA endodeoxyribonuclease activity
PPEFFPBC_00859 5.1e-163 spd F DNA RNA non-specific endonuclease
PPEFFPBC_00860 9e-93 lemA S LemA family
PPEFFPBC_00861 6.4e-133 htpX O Belongs to the peptidase M48B family
PPEFFPBC_00862 4.2e-75 S Psort location CytoplasmicMembrane, score
PPEFFPBC_00863 6.2e-56 S Domain of unknown function (DUF4430)
PPEFFPBC_00864 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PPEFFPBC_00865 2.4e-184 holA 2.7.7.7 L DNA polymerase III delta subunit
PPEFFPBC_00866 8.5e-113 sodA 1.15.1.1 C radicals which are normally produced within the cells and which are toxic to biological systems
PPEFFPBC_00867 6.1e-191 3.5.2.6 V D-alanyl-D-alanine carboxypeptidase
PPEFFPBC_00868 6.3e-85 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
PPEFFPBC_00869 3.2e-92 dps P Belongs to the Dps family
PPEFFPBC_00870 4.4e-79 perR P Belongs to the Fur family
PPEFFPBC_00871 1.9e-27 yqgQ S protein conserved in bacteria
PPEFFPBC_00872 7.8e-177 glk 2.7.1.2 G Glucokinase
PPEFFPBC_00873 0.0 typA T GTP-binding protein TypA
PPEFFPBC_00875 1.6e-252 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PPEFFPBC_00876 3.9e-201 murG 2.4.1.227 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PPEFFPBC_00877 8.2e-170 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PPEFFPBC_00878 2.3e-251 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PPEFFPBC_00879 2.7e-236 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PPEFFPBC_00880 5.1e-122 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PPEFFPBC_00881 1.4e-96 sepF D cell septum assembly
PPEFFPBC_00882 2e-34 yggT D integral membrane protein
PPEFFPBC_00883 8e-143 ylmH T S4 RNA-binding domain
PPEFFPBC_00884 3.3e-134 divIVA D Cell division protein DivIVA
PPEFFPBC_00885 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PPEFFPBC_00886 3.9e-229 mntH P Mn2 and Fe2 transporters of the NRAMP family
PPEFFPBC_00887 2e-45 rpmE2 J 50S ribosomal protein L31
PPEFFPBC_00888 1e-173 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PPEFFPBC_00889 6.5e-176 nrnA 3.1.13.3, 3.1.3.7 S domain protein
PPEFFPBC_00890 2.6e-154 gst O Glutathione S-transferase
PPEFFPBC_00891 1.3e-187 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PPEFFPBC_00892 2.4e-112 tdk 2.7.1.21 F thymidine kinase
PPEFFPBC_00893 3e-193 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PPEFFPBC_00894 6.8e-153 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PPEFFPBC_00895 2.5e-109 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PPEFFPBC_00896 1.8e-234 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PPEFFPBC_00897 1.2e-177 ndpA S 37-kD nucleoid-associated bacterial protein
PPEFFPBC_00898 1.9e-101 pvaA M lytic transglycosylase activity
PPEFFPBC_00899 0.0 yfiB1 V abc transporter atp-binding protein
PPEFFPBC_00900 0.0 XK27_10035 V abc transporter atp-binding protein
PPEFFPBC_00901 1.7e-09 S D-Ala-teichoic acid biosynthesis protein
PPEFFPBC_00902 2.1e-296 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PPEFFPBC_00903 3.9e-237 dltB M Membrane protein involved in D-alanine export
PPEFFPBC_00904 1.7e-35 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PPEFFPBC_00905 5.2e-229 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PPEFFPBC_00906 1.4e-58 L Transposase
PPEFFPBC_00907 0.0 3.6.3.8 P cation transport ATPase
PPEFFPBC_00908 0.0 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH component I
PPEFFPBC_00910 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PPEFFPBC_00911 1.1e-164 metF 1.5.1.20 C reductase
PPEFFPBC_00912 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
PPEFFPBC_00913 1.1e-93 panT S ECF transporter, substrate-specific component
PPEFFPBC_00914 1.4e-90 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PPEFFPBC_00915 2.8e-120 coaB 4.1.1.36, 6.3.2.5 H Phosphopantothenate-cysteine ligase
PPEFFPBC_00916 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PPEFFPBC_00917 1.2e-118 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PPEFFPBC_00918 1e-29 T PhoQ Sensor
PPEFFPBC_00919 4.1e-43 T PhoQ Sensor
PPEFFPBC_00920 3.7e-120 T PhoQ Sensor
PPEFFPBC_00921 1.7e-117 L Transposase
PPEFFPBC_00922 2.6e-163 L integrase core domain
PPEFFPBC_00923 1.1e-13 L Transposase
PPEFFPBC_00924 1.3e-29 rpsT J rRNA binding
PPEFFPBC_00925 5.5e-172 coaA 2.7.1.33 F Pantothenic acid kinase
PPEFFPBC_00926 3.7e-105 rsmC 2.1.1.172 J Methyltransferase small domain protein
PPEFFPBC_00927 2.3e-26 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
PPEFFPBC_00928 3e-23 pdp 2.4.2.2, 2.4.2.4 F phosphorylase activity
PPEFFPBC_00929 6.1e-94 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
PPEFFPBC_00930 2.9e-30 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PPEFFPBC_00931 9.9e-62 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PPEFFPBC_00932 3.8e-69 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PPEFFPBC_00933 8.9e-190 tcsA S ABC-type transport system, periplasmic component surface lipoprotein
PPEFFPBC_00934 3.7e-282 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
PPEFFPBC_00935 3e-190 yufP S Belongs to the binding-protein-dependent transport system permease family
PPEFFPBC_00936 1e-168 yufQ S Belongs to the binding-protein-dependent transport system permease family
PPEFFPBC_00937 9.8e-120 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
PPEFFPBC_00938 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PPEFFPBC_00939 1.2e-80 ypmB S Protein conserved in bacteria
PPEFFPBC_00940 1.6e-216 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
PPEFFPBC_00941 2.3e-259 asnS 6.1.1.22 J Catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
PPEFFPBC_00942 3.7e-19
PPEFFPBC_00943 2.1e-200 pmrB EGP Major facilitator Superfamily
PPEFFPBC_00944 8.6e-63 tdcF 3.5.99.10 J endoribonuclease L-PSP
PPEFFPBC_00945 4.4e-123 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
PPEFFPBC_00946 2.2e-81 queD 4.1.2.50, 4.2.3.12 H synthase
PPEFFPBC_00947 3.9e-133 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
PPEFFPBC_00948 2.5e-94 queF 1.7.1.13 S Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily
PPEFFPBC_00949 3.8e-19 D nuclear chromosome segregation
PPEFFPBC_00950 5.9e-135 yejC S cyclic nucleotide-binding protein
PPEFFPBC_00951 4.5e-163 rapZ S Displays ATPase and GTPase activities
PPEFFPBC_00952 3.6e-182 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PPEFFPBC_00953 1.9e-161 whiA K May be required for sporulation
PPEFFPBC_00954 9.7e-98 pepD E Dipeptidase
PPEFFPBC_00955 2.6e-44 pepD E Dipeptidase
PPEFFPBC_00956 1.5e-75 tspO T TspO/MBR family
PPEFFPBC_00957 2.6e-59 S Uncharacterised lipoprotein family
PPEFFPBC_00958 7.1e-28 L transposase activity
PPEFFPBC_00960 9e-27
PPEFFPBC_00961 9.3e-32 cspD K Cold shock protein domain
PPEFFPBC_00962 8e-42 K Cold-Shock Protein
PPEFFPBC_00963 0.0 copB 3.6.3.4 P COG2217 Cation transport ATPase
PPEFFPBC_00964 2.7e-147 glcU U sugar transport
PPEFFPBC_00965 2.3e-93 hsdM 2.1.1.72 V type I restriction-modification system
PPEFFPBC_00966 2.6e-55 hsdS 2.1.1.72, 3.1.21.3 V type I restriction modification DNA specificity domain
PPEFFPBC_00967 6.6e-20
PPEFFPBC_00968 5e-120
PPEFFPBC_00969 4.9e-105 L Phage integrase family
PPEFFPBC_00970 1.4e-112
PPEFFPBC_00972 6.2e-58 pepD E Dipeptidase
PPEFFPBC_00973 2e-56 XK27_10720 D peptidase activity
PPEFFPBC_00974 1.8e-292 adcA P Belongs to the bacterial solute-binding protein 9 family
PPEFFPBC_00975 1.7e-08
PPEFFPBC_00976 1.5e-170 yeiH S Membrane
PPEFFPBC_00977 1.6e-118 mur1 NU muramidase
PPEFFPBC_00978 4.2e-20 L transposase activity
PPEFFPBC_00979 2.2e-165 cpsY K Transcriptional regulator
PPEFFPBC_00980 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PPEFFPBC_00981 6.1e-57 phnA P Alkylphosphonate utilization operon protein PhnA
PPEFFPBC_00982 5.3e-105 artQ P ABC transporter (Permease
PPEFFPBC_00983 1.5e-112 glnQ 3.6.3.21 E abc transporter atp-binding protein
PPEFFPBC_00984 1.2e-157 aatB ET ABC transporter substrate-binding protein
PPEFFPBC_00985 2.1e-73 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PPEFFPBC_00986 6.1e-109 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PPEFFPBC_00987 2.1e-07
PPEFFPBC_00988 6.6e-62 adhP 1.1.1.1 C alcohol dehydrogenase
PPEFFPBC_00989 6.1e-112 adhP 1.1.1.1 C alcohol dehydrogenase
PPEFFPBC_00991 3e-21
PPEFFPBC_00992 0.0 res_1 3.1.21.5 S Type III restriction
PPEFFPBC_00993 0.0 sthIM 2.1.1.72 L Adenine specific DNA methylase Mod
PPEFFPBC_00994 4.3e-302 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PPEFFPBC_00995 2e-126 gntR1 K transcriptional
PPEFFPBC_00996 4.2e-53 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PPEFFPBC_00997 2.6e-270 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PPEFFPBC_00998 2e-86 niaX
PPEFFPBC_00999 6e-91 niaR S small molecule binding protein (contains 3H domain)
PPEFFPBC_01000 8.1e-128 K DNA-binding helix-turn-helix protein
PPEFFPBC_01001 1.2e-157 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PPEFFPBC_01002 1.2e-135 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PPEFFPBC_01003 4.5e-166 GK ROK family
PPEFFPBC_01004 8.3e-159 dprA LU DNA protecting protein DprA
PPEFFPBC_01005 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PPEFFPBC_01006 3.6e-154 S TraX protein
PPEFFPBC_01007 1.9e-121 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PPEFFPBC_01008 6.5e-249 T PhoQ Sensor
PPEFFPBC_01009 9.6e-258 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PPEFFPBC_01010 1.4e-77 XK27_05470 E Methionine synthase
PPEFFPBC_01011 6e-35 XK27_05470 E Methionine synthase
PPEFFPBC_01012 5e-75 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
PPEFFPBC_01013 4.4e-45 pspE P Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PPEFFPBC_01014 2.9e-92 ET Bacterial periplasmic substrate-binding proteins
PPEFFPBC_01015 1.9e-100 IQ Acetoin reductase
PPEFFPBC_01016 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PPEFFPBC_01020 1.1e-53 K peptidyl-tyrosine sulfation
PPEFFPBC_01021 2.8e-154 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
PPEFFPBC_01024 1.5e-212 pqqE C radical SAM domain protein
PPEFFPBC_01025 3.9e-136 speB 3.5.3.11 E hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
PPEFFPBC_01026 1.1e-60 EGP Major facilitator Superfamily
PPEFFPBC_01027 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
PPEFFPBC_01028 5.9e-129 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
PPEFFPBC_01029 8.2e-118 V ABC transporter (Permease
PPEFFPBC_01030 1e-112 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PPEFFPBC_01031 1.6e-10
PPEFFPBC_01032 1.2e-97 K Transcriptional regulator, TetR family
PPEFFPBC_01033 3.1e-159 czcD P cation diffusion facilitator family transporter
PPEFFPBC_01034 3.9e-123 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
PPEFFPBC_01035 1.2e-40 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
PPEFFPBC_01036 1e-23 adhB 1.1.1.1, 1.1.1.14 E Dehydrogenase
PPEFFPBC_01037 8e-123 adhB 1.1.1.1, 1.1.1.14 E Dehydrogenase
PPEFFPBC_01038 6e-08 S Hydrolases of the alpha beta superfamily
PPEFFPBC_01039 1e-16 S Alpha/beta hydrolase of unknown function (DUF915)
PPEFFPBC_01040 5.7e-52 S Alpha/beta hydrolase of unknown function (DUF915)
PPEFFPBC_01043 3.2e-141 2.4.2.3 F Phosphorylase superfamily
PPEFFPBC_01044 2.3e-116 gph 3.1.3.18 S HAD hydrolase, family IA, variant 1
PPEFFPBC_01045 1.8e-24 yclQ P ABC-type enterochelin transport system, periplasmic component
PPEFFPBC_01046 4.7e-18 yclQ P ABC-type enterochelin transport system, periplasmic component
PPEFFPBC_01047 3.9e-26 dinF V drug transmembrane transporter activity
PPEFFPBC_01049 3e-309 FbpA K RNA-binding protein homologous to eukaryotic snRNP
PPEFFPBC_01050 3.7e-190
PPEFFPBC_01051 3.1e-89 FNV0100 F Belongs to the Nudix hydrolase family
PPEFFPBC_01052 8.2e-14 3.4.13.21 I Protein conserved in bacteria
PPEFFPBC_01054 5.7e-118 S TraX protein
PPEFFPBC_01055 1.3e-96 thiJ 2.7.11.1, 3.5.1.124 S DJ-1 family
PPEFFPBC_01056 3.5e-146 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
PPEFFPBC_01057 4.4e-141 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PPEFFPBC_01058 2.3e-23 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PPEFFPBC_01059 9.1e-127 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PPEFFPBC_01060 7.5e-112 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PPEFFPBC_01061 1.2e-63 nylA 3.5.1.4 J Belongs to the amidase family
PPEFFPBC_01062 9.7e-264 dtpT E transporter
PPEFFPBC_01063 5.6e-104 nylA 3.5.1.4 J Belongs to the amidase family
PPEFFPBC_01064 2.4e-61 yckB ET Belongs to the bacterial solute-binding protein 3 family
PPEFFPBC_01065 2.9e-58 artJ_1 ET Belongs to the bacterial solute-binding protein 3 family
PPEFFPBC_01066 5.5e-53 yecS P ABC transporter (Permease
PPEFFPBC_01068 5.2e-24 sasH 3.1.3.5, 3.6.1.45 F Belongs to the 5'-nucleotidase family
PPEFFPBC_01069 1.1e-96 yfiF3 K sequence-specific DNA binding
PPEFFPBC_01070 8.8e-22 bglC K Transcriptional regulator
PPEFFPBC_01071 4.3e-245 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PPEFFPBC_01072 7.6e-239 agcS E (Alanine) symporter
PPEFFPBC_01073 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PPEFFPBC_01074 8.6e-240 metY 2.5.1.49 E o-acetylhomoserine
PPEFFPBC_01075 3.2e-133 S haloacid dehalogenase-like hydrolase
PPEFFPBC_01076 3.8e-87 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PPEFFPBC_01077 3.1e-110 hsdS2 2.1.1.72 V Type I restriction modification DNA specificity domain
PPEFFPBC_01078 5.7e-33 M1-755 P Hemerythrin HHE cation binding domain protein
PPEFFPBC_01079 6.4e-77 XK27_04775 S hemerythrin HHE cation binding domain
PPEFFPBC_01080 6.7e-78 XK27_04775 S hemerythrin HHE cation binding domain
PPEFFPBC_01081 4.4e-49 XK27_04775 S hemerythrin HHE cation binding domain
PPEFFPBC_01082 8.4e-151 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PPEFFPBC_01083 5.5e-172 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PPEFFPBC_01084 3e-69 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PPEFFPBC_01085 6.7e-44 yktA S Belongs to the UPF0223 family
PPEFFPBC_01086 4.2e-141 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
PPEFFPBC_01087 3e-256 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
PPEFFPBC_01088 4.8e-157 pstS P phosphate
PPEFFPBC_01089 2.5e-156 pstC P probably responsible for the translocation of the substrate across the membrane
PPEFFPBC_01090 1.5e-155 pstA P phosphate transport system permease
PPEFFPBC_01091 1e-150 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PPEFFPBC_01092 2.3e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PPEFFPBC_01093 1.9e-113 phoU P Plays a role in the regulation of phosphate uptake
PPEFFPBC_01094 0.0 pepN 3.4.11.2 E aminopeptidase
PPEFFPBC_01095 1e-193 xerS D Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division
PPEFFPBC_01096 1.5e-186 lplA 6.3.1.20 H Lipoate-protein ligase
PPEFFPBC_01099 3.7e-09
PPEFFPBC_01100 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PPEFFPBC_01101 5.4e-302 malQ 2.4.1.25 GH77 G 4-alpha-glucanotransferase
PPEFFPBC_01102 1.2e-62 malR K Transcriptional regulator
PPEFFPBC_01103 3.7e-46 malR K Transcriptional regulator
PPEFFPBC_01104 4.2e-17 malX G ABC transporter
PPEFFPBC_01105 9.1e-168 malX G ABC transporter
PPEFFPBC_01106 1.1e-202 malF P ABC transporter (Permease
PPEFFPBC_01107 4.6e-25 tatA U protein secretion
PPEFFPBC_01108 5.8e-121 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PPEFFPBC_01109 7.4e-300 ywbL P COG0672 High-affinity Fe2 Pb2 permease
PPEFFPBC_01110 1.6e-232 ycdB P peroxidase
PPEFFPBC_01111 7.1e-153 ycdO P periplasmic lipoprotein involved in iron transport
PPEFFPBC_01112 3e-34 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PPEFFPBC_01113 3.7e-85 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PPEFFPBC_01114 1.7e-60 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PPEFFPBC_01115 7.6e-66 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PPEFFPBC_01116 4.4e-133 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PPEFFPBC_01117 1.9e-186 3.5.1.28 M GBS Bsp-like repeat
PPEFFPBC_01118 2e-82 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
PPEFFPBC_01119 0.0 lpdA 1.8.1.4 C Dehydrogenase
PPEFFPBC_01120 1.3e-198 acoC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PPEFFPBC_01121 3.7e-182 acoB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PPEFFPBC_01122 1.7e-184 acoA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
PPEFFPBC_01123 0.0 S the current gene model (or a revised gene model) may contain a frame shift
PPEFFPBC_01124 1.1e-234 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PPEFFPBC_01125 2.2e-127 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PPEFFPBC_01126 1.6e-216 yeaB K Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PPEFFPBC_01127 5.9e-22 dacA1 3.4.16.4 M Belongs to the peptidase S11 family
PPEFFPBC_01128 3.9e-24 3.4.16.4 M Belongs to the peptidase S11 family
PPEFFPBC_01129 4.1e-127 3.4.16.4 M Belongs to the peptidase S11 family
PPEFFPBC_01130 4.2e-128 rssA S Phospholipase, patatin family
PPEFFPBC_01131 1.4e-25 estA E Lysophospholipase L1 and related esterases
PPEFFPBC_01132 1.9e-34 estA E GDSL-like protein
PPEFFPBC_01133 3.4e-29 estA E Lysophospholipase L1 and related esterases
PPEFFPBC_01134 1.4e-292 S unusual protein kinase
PPEFFPBC_01135 4.9e-39 S granule-associated protein
PPEFFPBC_01136 1.7e-106 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PPEFFPBC_01137 2e-18 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PPEFFPBC_01138 1.6e-197 S hmm pf01594
PPEFFPBC_01139 3.9e-102 G Belongs to the phosphoglycerate mutase family
PPEFFPBC_01140 5.2e-82 supH 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
PPEFFPBC_01141 2.2e-94 V VanZ like family
PPEFFPBC_01142 6e-39 L Helix-turn-helix domain of transposase family ISL3
PPEFFPBC_01143 3.1e-63 L Transposase
PPEFFPBC_01144 2.9e-24 L Transposase
PPEFFPBC_01145 8.5e-193 wbbI M transferase activity, transferring glycosyl groups
PPEFFPBC_01146 2e-213 glf 5.4.99.9 M UDP-galactopyranose mutase
PPEFFPBC_01147 8.3e-244 epsU S Polysaccharide biosynthesis protein
PPEFFPBC_01148 6.3e-173
PPEFFPBC_01149 6e-148 M Glycosyltransferase like family 2
PPEFFPBC_01150 1.1e-122 M Glycosyltransferase, group 2 family protein
PPEFFPBC_01152 5.4e-29 Z012_10770 M Domain of unknown function (DUF1919)
PPEFFPBC_01153 1.9e-57 Z012_10770 M Domain of unknown function (DUF1919)
PPEFFPBC_01154 5.7e-211 wcoF M Glycosyltransferase, group 1 family protein
PPEFFPBC_01155 2.5e-217 rgpAc GT4 M group 1 family protein
PPEFFPBC_01156 1.3e-249 cpsE M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
PPEFFPBC_01157 3.8e-115 cpsD D COG0489 ATPases involved in chromosome partitioning
PPEFFPBC_01158 1.4e-106 cps4C M biosynthesis protein
PPEFFPBC_01159 5.1e-136 cpsB 3.1.3.48 GM Capsular polysaccharide biosynthesis protein
PPEFFPBC_01160 2.6e-256 cps4A K Cell envelope-like function transcriptional attenuator common domain protein
PPEFFPBC_01161 1.2e-129 deoD 2.4.2.1, 2.4.2.28 F purine nucleoside phosphorylase
PPEFFPBC_01162 1.5e-124 yfeJ 6.3.5.2 F glutamine amidotransferase
PPEFFPBC_01163 1.1e-58 clcA_2 P chloride
PPEFFPBC_01164 1.2e-149 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
PPEFFPBC_01165 8.1e-41 S Protein of unknown function (DUF1697)
PPEFFPBC_01166 1.2e-235 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
PPEFFPBC_01167 9.5e-121 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PPEFFPBC_01168 4.3e-08 V Glucan-binding protein C
PPEFFPBC_01169 8.8e-21 V Glucan-binding protein C
PPEFFPBC_01170 2.4e-112 ung2 3.2.2.27 L Uracil-DNA glycosylase
PPEFFPBC_01171 9e-275 pepV 3.5.1.18 E Dipeptidase
PPEFFPBC_01172 6.4e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PPEFFPBC_01173 2e-41 XK27_03610 K Gnat family
PPEFFPBC_01174 7.2e-83 L Transposase
PPEFFPBC_01175 1.5e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PPEFFPBC_01176 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PPEFFPBC_01177 5.9e-86 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PPEFFPBC_01178 2.5e-121 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PPEFFPBC_01179 2.8e-18 M LysM domain
PPEFFPBC_01180 1.2e-88 ebsA S Family of unknown function (DUF5322)
PPEFFPBC_01181 2.2e-229 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PPEFFPBC_01182 7.1e-98 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PPEFFPBC_01183 1.1e-223 G COG0457 FOG TPR repeat
PPEFFPBC_01184 8.1e-176 yubA S permease
PPEFFPBC_01185 3.5e-93 mutX 3.6.1.55 F NTP pyrophosphohydrolases including oxidative damage repair enzymes
PPEFFPBC_01186 5.2e-162 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
PPEFFPBC_01187 5.5e-124 ftsE D cell division ATP-binding protein FtsE
PPEFFPBC_01188 4.8e-182 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PPEFFPBC_01189 1.2e-202 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PPEFFPBC_01190 9.2e-183 yjjH S Calcineurin-like phosphoesterase
PPEFFPBC_01191 1.5e-135 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PPEFFPBC_01192 0.0 pacL 3.6.3.8 P cation transport ATPase
PPEFFPBC_01193 3.4e-67 ywiB S Domain of unknown function (DUF1934)
PPEFFPBC_01194 2.4e-44 XK27_00115 2.3.1.128 K acetyltransferase
PPEFFPBC_01195 9.2e-147 yidA S hydrolases of the HAD superfamily
PPEFFPBC_01196 2.6e-230 murM 2.3.2.10, 2.3.2.16 V protein involved in methicillin resistance
PPEFFPBC_01197 1.6e-33 F Protein of unknown function (DUF454)
PPEFFPBC_01198 3.9e-153 vicX 3.1.26.11 S Metal-dependent hydrolases of the beta-lactamase superfamily I
PPEFFPBC_01199 5.8e-247 vicK 2.7.13.3 T Histidine kinase
PPEFFPBC_01200 9.9e-129 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PPEFFPBC_01201 2.1e-140 glnQ 3.6.3.21 E abc transporter atp-binding protein
PPEFFPBC_01202 9.2e-150 peb1A ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
PPEFFPBC_01203 8e-115 gltJ P ABC transporter (Permease
PPEFFPBC_01204 3.8e-111 tcyB_2 P ABC transporter (permease)
PPEFFPBC_01205 1.6e-123 endA F DNA RNA non-specific endonuclease
PPEFFPBC_01206 1.2e-25 epuA S DNA-directed RNA polymerase subunit beta
PPEFFPBC_01207 1.1e-231 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PPEFFPBC_01209 1.8e-195 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PPEFFPBC_01210 8.3e-135 G Domain of unknown function (DUF4832)
PPEFFPBC_01211 2.3e-82 S membrane
PPEFFPBC_01212 2.1e-10 P VTC domain
PPEFFPBC_01213 1.2e-52 P VTC domain
PPEFFPBC_01214 2.9e-213 cotH M CotH kinase protein
PPEFFPBC_01215 7.6e-184 pelG M Putative exopolysaccharide Exporter (EPS-E)
PPEFFPBC_01216 1.5e-274 pelF GT4 M Domain of unknown function (DUF3492)
PPEFFPBC_01217 0.0 S Uncharacterised protein conserved in bacteria (DUF2194)
PPEFFPBC_01218 1.5e-145
PPEFFPBC_01219 4.5e-134 5.1.3.2 GM Psort location CytoplasmicMembrane, score
PPEFFPBC_01220 2.1e-203 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PPEFFPBC_01221 4.2e-175 birA 6.3.4.15 HK Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PPEFFPBC_01222 7.1e-295 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PPEFFPBC_01223 3.6e-88 ytsP 1.8.4.14 T GAF domain-containing protein
PPEFFPBC_01224 3e-162 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PPEFFPBC_01225 7.2e-20 WQ51_02665 S Protein of unknown function (DUF3042)
PPEFFPBC_01227 5.5e-101 S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PPEFFPBC_01228 4.1e-127 yxlF V abc transporter atp-binding protein
PPEFFPBC_01230 1.7e-148 K Helix-turn-helix XRE-family like proteins
PPEFFPBC_01231 4.4e-35 yvdC S MazG nucleotide pyrophosphohydrolase domain
PPEFFPBC_01232 1.3e-78 yvdD 3.2.2.10 S Belongs to the LOG family
PPEFFPBC_01234 1.6e-205 int L Belongs to the 'phage' integrase family
PPEFFPBC_01235 3.9e-16 S Domain of unknown function (DUF3173)
PPEFFPBC_01236 7e-192 L Replication initiation factor
PPEFFPBC_01237 2.1e-38
PPEFFPBC_01238 7.5e-14
PPEFFPBC_01239 2.9e-43 K sequence-specific DNA binding
PPEFFPBC_01240 2.8e-177 S Bacteriophage abortive infection AbiH
PPEFFPBC_01241 8.5e-89 S Bacteriophage abortive infection AbiH
PPEFFPBC_01242 1.9e-108
PPEFFPBC_01244 8.5e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PPEFFPBC_01245 2.1e-219 XK27_05110 P chloride
PPEFFPBC_01246 8.7e-41 pheA 1.3.1.12, 2.3.1.79, 4.2.1.51, 5.4.99.5 E Chorismate mutase
PPEFFPBC_01247 9.8e-283 clcA P Chloride transporter, ClC family
PPEFFPBC_01248 1e-75 fld C Flavodoxin
PPEFFPBC_01249 3.3e-14 XK27_08880
PPEFFPBC_01250 6.1e-126 XK27_08875 O Zinc-dependent metalloprotease
PPEFFPBC_01251 1.1e-149 estA CE1 S Putative esterase
PPEFFPBC_01252 4.3e-308 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PPEFFPBC_01253 1.5e-135 XK27_08845 S abc transporter atp-binding protein
PPEFFPBC_01254 8.9e-148 XK27_08840 S Belongs to the binding-protein-dependent transport system permease family
PPEFFPBC_01255 9.9e-175 XK27_08835 S ABC transporter substrate binding protein
PPEFFPBC_01256 3.2e-17 S Domain of unknown function (DUF4649)
PPEFFPBC_01257 9e-11 Q the current gene model (or a revised gene model) may contain a frame shift
PPEFFPBC_01258 6.6e-08 Q the current gene model (or a revised gene model) may contain a frame shift
PPEFFPBC_01259 6.3e-28 Q the current gene model (or a revised gene model) may contain a frame shift
PPEFFPBC_01262 8.2e-274 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PPEFFPBC_01263 8.8e-187 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PPEFFPBC_01264 0.0 dnaE 2.7.7.7 L DNA polymerase
PPEFFPBC_01265 1.4e-152 sua5 2.7.7.87 J Belongs to the SUA5 family
PPEFFPBC_01266 3.1e-112 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PPEFFPBC_01267 6.8e-275 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PPEFFPBC_01268 2.5e-43 ysdA L Membrane
PPEFFPBC_01269 6.6e-190 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PPEFFPBC_01270 2.9e-290 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PPEFFPBC_01271 4.6e-131 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PPEFFPBC_01272 3.3e-180 pyrD 1.3.1.14, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate
PPEFFPBC_01274 2.8e-39 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PPEFFPBC_01275 3e-91 ypmS S Protein conserved in bacteria
PPEFFPBC_01276 4.6e-144 ypmR E lipolytic protein G-D-S-L family
PPEFFPBC_01277 3.3e-147 DegV S DegV family
PPEFFPBC_01278 5.8e-305 recN L May be involved in recombinational repair of damaged DNA
PPEFFPBC_01279 3.7e-73 argR K Regulates arginine biosynthesis genes
PPEFFPBC_01280 5e-159 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PPEFFPBC_01281 6.6e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PPEFFPBC_01282 3.5e-29 xseB 3.1.11.6 L exodeoxyribonuclease VII activity
PPEFFPBC_01283 1.2e-247 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PPEFFPBC_01286 3.4e-120 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PPEFFPBC_01287 3.8e-125 dnaD
PPEFFPBC_01288 9.3e-183 metA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PPEFFPBC_01289 2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PPEFFPBC_01290 0.0 recJ L Single-strand DNA-specific exonuclease, C terminal domain
PPEFFPBC_01291 1.5e-138 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PPEFFPBC_01292 9.2e-175 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PPEFFPBC_01293 3.9e-116 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
PPEFFPBC_01294 2.7e-222 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PPEFFPBC_01295 7.3e-232 rodA D Belongs to the SEDS family
PPEFFPBC_01296 2e-49 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
PPEFFPBC_01297 4e-59 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PPEFFPBC_01298 2e-135 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PPEFFPBC_01299 1.9e-127 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PPEFFPBC_01300 9.8e-109 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PPEFFPBC_01301 1.5e-106 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
PPEFFPBC_01302 3.5e-233 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PPEFFPBC_01303 4e-116 hisG 2.4.2.17 E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PPEFFPBC_01304 5.7e-183 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PPEFFPBC_01305 8.2e-196 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PPEFFPBC_01307 2e-31 XK27_08085
PPEFFPBC_01308 8.4e-88 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
PPEFFPBC_01309 7.9e-10 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
PPEFFPBC_01310 5.8e-140 hisK 3.1.3.15 E Histidinol phosphatase and related hydrolases of the PHP family
PPEFFPBC_01311 5.8e-120 ylfI S tigr01906
PPEFFPBC_01312 5.9e-143 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PPEFFPBC_01313 4.8e-142 fat 3.1.2.21 I Acyl-ACP thioesterase
PPEFFPBC_01314 4.5e-216 hemN H Involved in the biosynthesis of porphyrin-containing compound
PPEFFPBC_01317 1.9e-205 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PPEFFPBC_01318 2.7e-111 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PPEFFPBC_01319 5.4e-161 rfbA 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PPEFFPBC_01320 1.7e-204 yurR 1.4.5.1 E oxidoreductase
PPEFFPBC_01321 1.6e-101 zupT P Mediates zinc uptake. May also transport other divalent cations
PPEFFPBC_01322 7e-22 zupT P Mediates zinc uptake. May also transport other divalent cations
PPEFFPBC_01323 9.6e-149 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PPEFFPBC_01324 3.5e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
PPEFFPBC_01325 1.3e-70 gtrA S GtrA-like protein
PPEFFPBC_01326 1.3e-249 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PPEFFPBC_01327 2.5e-167 ybbR S Protein conserved in bacteria
PPEFFPBC_01328 2.8e-123 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PPEFFPBC_01329 2e-252 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain protein
PPEFFPBC_01330 8.7e-150 cobQ S glutamine amidotransferase
PPEFFPBC_01331 0.0 mprF 2.3.2.3 J Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PPEFFPBC_01332 9.1e-130 pip 1.11.1.10 S Alpha beta hydrolase
PPEFFPBC_01334 0.0 uup S abc transporter atp-binding protein
PPEFFPBC_01335 2.1e-114 udk 2.7.1.48 F Cytidine monophosphokinase
PPEFFPBC_01336 1.8e-177 yfmL 3.6.4.13 L DEAD DEAH box helicase
PPEFFPBC_01337 4.8e-28 6.3.2.2, 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PPEFFPBC_01338 1.9e-264 gapN 1.2.1.9 C Belongs to the aldehyde dehydrogenase family
PPEFFPBC_01339 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PPEFFPBC_01340 7.9e-39 ptsH G phosphocarrier protein Hpr
PPEFFPBC_01341 8.2e-221 icd 1.1.1.42 C Isocitrate dehydrogenase
PPEFFPBC_01342 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PPEFFPBC_01343 8.5e-34 nrdH O Glutaredoxin
PPEFFPBC_01344 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PPEFFPBC_01345 8.6e-184 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PPEFFPBC_01347 4.2e-71 L Transposase (IS116 IS110 IS902 family)
PPEFFPBC_01348 8.8e-60 L Transposase (IS116 IS110 IS902 family)
PPEFFPBC_01349 5.3e-165 ypuA S secreted protein
PPEFFPBC_01350 1.5e-52 yaeR E COG0346 LactoylglutaTHIone lyase and related lyases
PPEFFPBC_01351 1.6e-132 srtA 3.4.22.70 M Sortase (surface protein transpeptidase)
PPEFFPBC_01352 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PPEFFPBC_01353 1.6e-180 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PPEFFPBC_01354 3.7e-257 noxE P NADH oxidase
PPEFFPBC_01355 3.6e-293 yfmM S abc transporter atp-binding protein
PPEFFPBC_01356 1.6e-63 XK27_01265 S ECF-type riboflavin transporter, S component
PPEFFPBC_01357 3.7e-44 L Transposase
PPEFFPBC_01358 1.5e-10 XK27_01265 S ECF-type riboflavin transporter, S component
PPEFFPBC_01359 9.3e-87 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
PPEFFPBC_01360 5.5e-42 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
PPEFFPBC_01361 2e-86 S ECF-type riboflavin transporter, S component
PPEFFPBC_01363 7.7e-241 XK27_08130 K Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PPEFFPBC_01364 2e-55 nrdD_1 1.1.98.6, 1.17.4.1 F Ribonucleoside-triphosphate reductase
PPEFFPBC_01366 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PPEFFPBC_01367 9.9e-94 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PPEFFPBC_01368 1.1e-197 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PPEFFPBC_01369 0.0 smc D Required for chromosome condensation and partitioning
PPEFFPBC_01370 1.9e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PPEFFPBC_01371 6.6e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PPEFFPBC_01372 1.1e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PPEFFPBC_01373 2.8e-93 pat 2.3.1.183 M acetyltransferase
PPEFFPBC_01374 4.2e-12 L Transposase
PPEFFPBC_01375 1.1e-278 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PPEFFPBC_01376 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PPEFFPBC_01377 3.9e-37 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 E hydrolase
PPEFFPBC_01378 1.5e-55 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 E hydrolase
PPEFFPBC_01379 5.4e-60 sdaAB 4.3.1.17 E L-serine dehydratase
PPEFFPBC_01380 1.3e-100 desR K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PPEFFPBC_01381 6e-186 desK 2.7.13.3 T Histidine kinase
PPEFFPBC_01382 1.5e-132 yvfS V ABC-2 type transporter
PPEFFPBC_01383 5.1e-159 XK27_09825 V abc transporter atp-binding protein
PPEFFPBC_01387 6.6e-213 EGP Major facilitator Superfamily
PPEFFPBC_01388 0.0 2.7.7.73, 2.7.7.80 E metalloendopeptidase activity
PPEFFPBC_01389 1.2e-152 mutR K Transcriptional activator, Rgg GadR MutR family
PPEFFPBC_01390 4.6e-42 3.6.1.55 F NUDIX domain
PPEFFPBC_01392 3.7e-122 S An automated process has identified a potential problem with this gene model
PPEFFPBC_01393 6.1e-26 XK27_09825 V 'abc transporter, ATP-binding protein
PPEFFPBC_01394 1.4e-15 liaI KT membrane
PPEFFPBC_01395 2.6e-30 liaI KT membrane
PPEFFPBC_01396 4e-92 XK27_05000 S Fe-S-cluster oxidoreductase
PPEFFPBC_01397 0.0 V ABC transporter (permease)
PPEFFPBC_01398 1.9e-133 macB2 V ABC transporter, ATP-binding protein
PPEFFPBC_01399 6.2e-166 T Histidine kinase
PPEFFPBC_01400 2e-123 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PPEFFPBC_01401 2e-77 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PPEFFPBC_01403 3.3e-69 pbuX F xanthine permease
PPEFFPBC_01404 5.9e-115 pbuX F xanthine permease
PPEFFPBC_01405 4.5e-247 norM V Multidrug efflux pump
PPEFFPBC_01406 3.7e-187 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PPEFFPBC_01407 6.6e-235 brnQ E Component of the transport system for branched-chain amino acids
PPEFFPBC_01408 9.4e-65 manA 5.3.1.8 G mannose-6-phosphate isomerase
PPEFFPBC_01409 8.2e-57 manA 5.3.1.8 G mannose-6-phosphate isomerase
PPEFFPBC_01410 4.8e-25 csbD K CsbD-like
PPEFFPBC_01412 4.8e-244 yfnA E amino acid
PPEFFPBC_01413 4e-69 S dextransucrase activity
PPEFFPBC_01414 6.3e-14 S dextransucrase activity
PPEFFPBC_01415 8.8e-39 S dextransucrase activity
PPEFFPBC_01416 9.4e-139 S dextransucrase activity
PPEFFPBC_01417 4.5e-31 L Transposase and inactivated derivatives
PPEFFPBC_01421 5.8e-135 tcyC2 3.6.3.21 E abc transporter atp-binding protein
PPEFFPBC_01422 3e-114 yxeN P ABC transporter, permease protein
PPEFFPBC_01423 6.1e-107 ytmL P ABC transporter (Permease
PPEFFPBC_01424 2.4e-161 ET ABC transporter substrate-binding protein
PPEFFPBC_01425 8.1e-161 4.1.1.37 H Uroporphyrinogen decarboxylase (URO-D)
PPEFFPBC_01426 1.1e-83 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
PPEFFPBC_01427 2.4e-40 S Sugar efflux transporter for intercellular exchange
PPEFFPBC_01428 5.9e-23 P FtsX-like permease family
PPEFFPBC_01429 2.9e-92 V abc transporter atp-binding protein
PPEFFPBC_01430 6e-83 K WHG domain
PPEFFPBC_01431 9.4e-68 ydhF S Aldo keto reductase
PPEFFPBC_01432 2.1e-71 ydhF S Aldo keto reductase
PPEFFPBC_01434 1.3e-110 XK27_02070 S nitroreductase
PPEFFPBC_01435 5.4e-197 L transposase, IS4 family
PPEFFPBC_01436 8.9e-128 1.13.11.2 S glyoxalase
PPEFFPBC_01437 4.7e-76 ywnA K Transcriptional regulator
PPEFFPBC_01438 1.3e-154 E Alpha/beta hydrolase of unknown function (DUF915)
PPEFFPBC_01439 4.3e-231 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PPEFFPBC_01440 1.4e-110 drgA C Nitroreductase
PPEFFPBC_01441 9.9e-98 yoaK S Protein of unknown function (DUF1275)
PPEFFPBC_01442 6.8e-161 yvgN C reductase
PPEFFPBC_01443 8.2e-179 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PPEFFPBC_01444 7.3e-283 XK27_07020 S Belongs to the UPF0371 family
PPEFFPBC_01446 7e-54 K response regulator
PPEFFPBC_01447 1.3e-70 S Signal peptide protein, YSIRK family
PPEFFPBC_01449 3.3e-111
PPEFFPBC_01450 2.4e-12 IQ PFAM AMP-dependent synthetase and ligase
PPEFFPBC_01451 7.6e-23 IQ PFAM AMP-dependent synthetase and ligase
PPEFFPBC_01452 5.8e-109 MA20_06410 E LysE type translocator
PPEFFPBC_01453 2e-17
PPEFFPBC_01455 0.0 M family 8
PPEFFPBC_01456 1.5e-37 L transposase activity
PPEFFPBC_01457 7e-136 L Transposase and inactivated derivatives
PPEFFPBC_01458 4.8e-36 L COG2963 Transposase and inactivated derivatives
PPEFFPBC_01459 8.5e-09
PPEFFPBC_01460 2.6e-18
PPEFFPBC_01461 5.7e-39 L transposition
PPEFFPBC_01462 4.2e-60 L Transposase and inactivated derivatives
PPEFFPBC_01463 3.1e-44 L COG2963 Transposase and inactivated derivatives
PPEFFPBC_01464 1e-31
PPEFFPBC_01465 0.0 sbcC L ATPase involved in DNA repair
PPEFFPBC_01466 7.6e-230 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PPEFFPBC_01467 0.0 lacL 3.2.1.23 G -beta-galactosidase
PPEFFPBC_01468 0.0 lacS G transporter
PPEFFPBC_01469 8.7e-198 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PPEFFPBC_01470 1.2e-193 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PPEFFPBC_01471 1.9e-283 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
PPEFFPBC_01472 1.1e-220 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PPEFFPBC_01473 1.7e-21 galR K Transcriptional regulator
PPEFFPBC_01474 2.3e-150 galR K Transcriptional regulator
PPEFFPBC_01475 1.2e-08 L Integrase core domain protein
PPEFFPBC_01476 2.4e-257 zmpB M M26 IgA1-specific Metallo-endopeptidase C-terminal region
PPEFFPBC_01477 3.6e-100 V abc transporter atp-binding protein
PPEFFPBC_01478 2.1e-39 V (ABC) transporter
PPEFFPBC_01479 0.0 gshF 6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
PPEFFPBC_01481 2.4e-273 S Protein of unknown function (DUF3114)
PPEFFPBC_01482 1.7e-51 2.3.1.128 K Acetyltransferase GNAT Family
PPEFFPBC_01483 1.1e-196 V (ABC) transporter
PPEFFPBC_01484 1.2e-157 C Arylsulfatase regulator (Fe-S oxidoreductase)
PPEFFPBC_01485 5.9e-25 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PPEFFPBC_01486 2.1e-82 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PPEFFPBC_01487 1e-84 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PPEFFPBC_01488 2.2e-182 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PPEFFPBC_01489 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PPEFFPBC_01490 3.9e-187 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
PPEFFPBC_01491 1.4e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PPEFFPBC_01492 1.3e-93 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PPEFFPBC_01495 2.2e-114 vraR K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PPEFFPBC_01496 3.8e-174 vraS 2.7.13.3 T Histidine kinase
PPEFFPBC_01497 9.1e-119 yvqF KT membrane
PPEFFPBC_01498 2.9e-305 prkC 2.7.11.1 KLT serine threonine protein kinase
PPEFFPBC_01499 2.9e-131 stp 3.1.3.16 T phosphatase
PPEFFPBC_01500 4.4e-247 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PPEFFPBC_01501 1e-173 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PPEFFPBC_01502 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PPEFFPBC_01503 3e-45 rpoZ 2.7.7.6 K DNA-directed 5'-3' RNA polymerase activity
PPEFFPBC_01504 2e-112 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
PPEFFPBC_01505 6.7e-214 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PPEFFPBC_01506 5.3e-150 XK27_02985 S overlaps another CDS with the same product name
PPEFFPBC_01507 2.1e-148 supH S overlaps another CDS with the same product name
PPEFFPBC_01508 8.6e-63 yvoA_1 K Transcriptional
PPEFFPBC_01509 9.8e-121 skfE V abc transporter atp-binding protein
PPEFFPBC_01510 5.6e-133 V ATPase activity
PPEFFPBC_01511 1.2e-171 oppF P Belongs to the ABC transporter superfamily
PPEFFPBC_01512 1.4e-203 oppD P Belongs to the ABC transporter superfamily
PPEFFPBC_01513 3.1e-167 amiD P ABC transporter (Permease
PPEFFPBC_01514 1.1e-270 amiC P ABC transporter (Permease
PPEFFPBC_01515 0.0 amiA E ABC transporter, substrate-binding protein, family 5
PPEFFPBC_01516 3.2e-44 oppF P Belongs to the ABC transporter superfamily
PPEFFPBC_01517 1.4e-40 tatD L Hydrolase, tatd
PPEFFPBC_01518 9.9e-214 oxlT P COG0477 Permeases of the major facilitator superfamily
PPEFFPBC_01519 3.2e-59 L Integrase core domain protein
PPEFFPBC_01520 2.9e-54 L transposition
PPEFFPBC_01521 8.5e-23 L Transposase
PPEFFPBC_01522 6.1e-37 L Transposase
PPEFFPBC_01523 5.9e-180 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PPEFFPBC_01524 2.8e-173 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PPEFFPBC_01525 8.3e-151 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PPEFFPBC_01526 1.4e-119 yjbM 2.7.6.5 S Gtp pyrophosphokinase
PPEFFPBC_01527 4.4e-103 yjbK S Adenylate cyclase
PPEFFPBC_01528 1.2e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PPEFFPBC_01529 1.2e-205 iscS 2.8.1.7 E Cysteine desulfurase
PPEFFPBC_01530 1.2e-58 XK27_04120 S Putative amino acid metabolism
PPEFFPBC_01531 1.1e-116 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PPEFFPBC_01532 5.1e-130 puuD T peptidase C26
PPEFFPBC_01533 2.4e-119 radC E Belongs to the UPF0758 family
PPEFFPBC_01534 1.1e-181
PPEFFPBC_01535 1.1e-98
PPEFFPBC_01536 0.0 rgpF M Rhamnan synthesis protein F
PPEFFPBC_01537 3.1e-195 rgpEc GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
PPEFFPBC_01538 8.7e-226 rgpD 3.6.3.38 P Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PPEFFPBC_01539 1.4e-142 rgpC GM Transport permease protein
PPEFFPBC_01540 2.4e-178 rgpB GT2 M Glycosyltransferase, group 2 family protein
PPEFFPBC_01541 4.5e-224 rgpA GT4 M Domain of unknown function (DUF1972)
PPEFFPBC_01542 1.5e-160 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PPEFFPBC_01543 7.8e-244
PPEFFPBC_01544 6.3e-168 yfdH GT2 M COG0463, glycosyltransferases involved in cell wall biogenesis
PPEFFPBC_01545 3.4e-55 yitW K metal-sulfur cluster biosynthetic enzyme
PPEFFPBC_01546 1.1e-201 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PPEFFPBC_01547 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PPEFFPBC_01548 4.3e-46 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PPEFFPBC_01549 1.2e-19 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PPEFFPBC_01550 4.2e-136 gltS ET Belongs to the bacterial solute-binding protein 3 family
PPEFFPBC_01551 4e-201 arcT 2.6.1.1 E Aminotransferase
PPEFFPBC_01552 2.5e-136 ET ABC transporter
PPEFFPBC_01553 1.7e-140 ET Belongs to the bacterial solute-binding protein 3 family
PPEFFPBC_01554 1.6e-82 mutT 3.6.1.55 F Nudix family
PPEFFPBC_01555 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PPEFFPBC_01557 4.3e-82 S CAAX amino terminal protease family protein
PPEFFPBC_01558 4e-33 S CAAX amino terminal protease family protein
PPEFFPBC_01559 0.0 glnP P ABC-type amino acid transport signal transduction systems periplasmic component domain
PPEFFPBC_01560 6e-137 glnQ 3.6.3.21 E abc transporter atp-binding protein
PPEFFPBC_01561 1.1e-16 XK27_00735
PPEFFPBC_01562 1.4e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PPEFFPBC_01563 3.4e-132 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PPEFFPBC_01566 1.6e-64 paaI Q protein possibly involved in aromatic compounds catabolism
PPEFFPBC_01567 1.4e-50 ycaO O OsmC-like protein
PPEFFPBC_01569 3.8e-154 EG Permeases of the drug metabolite transporter (DMT) superfamily
PPEFFPBC_01571 8.2e-114 serB 3.1.3.3 E phosphoserine phosphatase
PPEFFPBC_01572 7.4e-303 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PPEFFPBC_01573 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PPEFFPBC_01574 1.3e-108 3.1.3.18 S IA, variant 1
PPEFFPBC_01575 2.2e-117 lrgB M effector of murein hydrolase
PPEFFPBC_01576 7.7e-56 lrgA S Effector of murein hydrolase LrgA
PPEFFPBC_01578 6.4e-60 arsC 1.20.4.1 P Belongs to the ArsC family
PPEFFPBC_01579 7e-56 ogt 2.1.1.63, 3.2.2.20 L methylated-DNA-[protein]-cysteine S-methyltransferase activity
PPEFFPBC_01580 7e-220 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PPEFFPBC_01581 1.3e-104 wecD M Acetyltransferase (GNAT) domain
PPEFFPBC_01582 1.3e-209 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PPEFFPBC_01583 1.2e-74 GK ROK family
PPEFFPBC_01584 8.1e-72 gloA 4.4.1.5 E Lactoylglutathione lyase
PPEFFPBC_01585 6.6e-62 XK27_08050 O stress-induced mitochondrial fusion
PPEFFPBC_01586 6.2e-13 XK27_08050 O HflC and HflK could regulate a protease
PPEFFPBC_01587 4.3e-74 XK27_01300 S ASCH
PPEFFPBC_01589 2.1e-50 S Toxin-antitoxin system, toxin component, RelE family
PPEFFPBC_01590 2e-29 K Helix-turn-helix XRE-family like proteins
PPEFFPBC_01591 7.5e-09 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PPEFFPBC_01592 1.1e-12
PPEFFPBC_01593 4.3e-167 V MatE
PPEFFPBC_01595 3.9e-110 C Fe-S oxidoreductases
PPEFFPBC_01596 1.2e-176 EGP Major Facilitator Superfamily
PPEFFPBC_01597 2.7e-257 I radical SAM domain protein
PPEFFPBC_01599 3.2e-158 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
PPEFFPBC_01600 1.4e-150 L Integrase core domain protein
PPEFFPBC_01601 1.8e-87 L transposase activity
PPEFFPBC_01603 1.9e-107
PPEFFPBC_01604 7.4e-90
PPEFFPBC_01605 4.5e-21 XK27_08050 O HflC and HflK could regulate a protease
PPEFFPBC_01607 2.3e-206 potD P spermidine putrescine ABC transporter
PPEFFPBC_01608 3e-134 potC P ABC-type spermidine putrescine transport system, permease component II
PPEFFPBC_01609 3.7e-140 potB P ABC-type spermidine putrescine transport system, permease component I
PPEFFPBC_01610 1.2e-213 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PPEFFPBC_01611 7.8e-171 murB 1.3.1.98 M cell wall formation
PPEFFPBC_01612 2.9e-87 folK 2.7.6.3, 4.1.2.25 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
PPEFFPBC_01613 2.2e-60 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PPEFFPBC_01614 3e-297 amy 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
PPEFFPBC_01615 7e-147 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PPEFFPBC_01616 1e-99 folE 3.5.4.16 F gtp cyclohydrolase
PPEFFPBC_01617 0.0 ydaO E amino acid
PPEFFPBC_01618 5.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PPEFFPBC_01619 4.1e-37 ylqC L Belongs to the UPF0109 family
PPEFFPBC_01620 2.4e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PPEFFPBC_01621 6.9e-172 tehB 2.1.1.265 PQ tellurite resistance protein tehb
PPEFFPBC_01622 1e-156 xth 3.1.11.2 L exodeoxyribonuclease III
PPEFFPBC_01623 2.1e-74 S QueT transporter
PPEFFPBC_01624 1.9e-118 ribD 1.1.1.193, 3.5.4.26 L Transposase DDE domain
PPEFFPBC_01625 1.9e-186 yegS 2.7.1.107 I Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
PPEFFPBC_01626 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PPEFFPBC_01627 1.3e-85 ccl S cog cog4708
PPEFFPBC_01628 2.4e-159 rbn E Belongs to the UPF0761 family
PPEFFPBC_01629 7.2e-166 map 3.4.11.18 E Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed
PPEFFPBC_01630 2.8e-230 ytoI K transcriptional regulator containing CBS domains
PPEFFPBC_01631 1.5e-97 XK27_07830 2.3.1.128 J Acetyltransferase GNAT Family
PPEFFPBC_01632 1.6e-233 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PPEFFPBC_01633 0.0 comEC S Competence protein ComEC
PPEFFPBC_01634 3e-98 comEA L COG1555 DNA uptake protein and related DNA-binding proteins
PPEFFPBC_01635 1.7e-142 plsC 2.3.1.51 I Acyltransferase
PPEFFPBC_01636 1.8e-140 nodB3 G deacetylase
PPEFFPBC_01637 7.1e-141 yabB 2.1.1.223 L Methyltransferase
PPEFFPBC_01638 1e-41 yazA L endonuclease containing a URI domain
PPEFFPBC_01639 3.4e-222 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PPEFFPBC_01640 3.3e-153 corA P CorA-like protein
PPEFFPBC_01641 3.3e-62 yjqA S Bacterial PH domain
PPEFFPBC_01642 2.3e-99 thiT S Thiamine transporter
PPEFFPBC_01643 3.1e-300 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PPEFFPBC_01644 7.1e-121 ywaF S Integral membrane protein (intg_mem_TP0381)
PPEFFPBC_01645 1.7e-257 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PPEFFPBC_01649 1.1e-155 cjaA ET ABC transporter substrate-binding protein
PPEFFPBC_01650 1.7e-134 glnQ 3.6.3.21 E abc transporter atp-binding protein
PPEFFPBC_01651 3e-106 P ABC transporter (Permease
PPEFFPBC_01652 3.9e-114 papP P ABC transporter (Permease
PPEFFPBC_01653 6.4e-193 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PPEFFPBC_01654 2e-29 copZ 2.7.7.77 P Heavy metal-associated domain protein
PPEFFPBC_01655 0.0 copA 3.6.3.54 P P-type ATPase
PPEFFPBC_01656 2.7e-73 copY K Copper transport repressor, CopY TcrY family
PPEFFPBC_01657 6e-143 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PPEFFPBC_01658 3.8e-229 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PPEFFPBC_01659 1.1e-98 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E belongs to the TrpF family
PPEFFPBC_01660 3.2e-133 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
PPEFFPBC_01661 7.8e-180 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PPEFFPBC_01662 1e-104 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH anthranilate
PPEFFPBC_01663 2.9e-254 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PPEFFPBC_01664 1.8e-41 pchB 2.5.1.19, 4.2.1.10, 4.2.99.21, 5.4.99.5 E Chorismate mutase
PPEFFPBC_01665 0.0 ctpE P E1-E2 ATPase
PPEFFPBC_01666 1.6e-27
PPEFFPBC_01667 7e-32 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PPEFFPBC_01668 5.1e-47 L transposase activity
PPEFFPBC_01669 6e-121 K transcriptional regulator, MerR family
PPEFFPBC_01670 1.3e-102 dnaQ 2.7.7.7 L DNA polymerase III
PPEFFPBC_01671 9.1e-42 WQ51_02910 S Protein of unknown function, DUF536
PPEFFPBC_01672 4.8e-63 XK27_02560 S cog cog2151
PPEFFPBC_01673 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
PPEFFPBC_01674 7.7e-227 ytfP S Flavoprotein
PPEFFPBC_01676 3.4e-120 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PPEFFPBC_01677 1.2e-151 ytmP 2.7.1.89 M Phosphotransferase
PPEFFPBC_01678 4.3e-181 ecsB U ABC transporter
PPEFFPBC_01679 1.1e-130 ecsA V abc transporter atp-binding protein
PPEFFPBC_01680 1.1e-69 hit FG Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
PPEFFPBC_01681 1.9e-09
PPEFFPBC_01683 1.1e-19
PPEFFPBC_01684 6.3e-07
PPEFFPBC_01685 0.0 clpL O ATP-dependent Clp protease ATP-binding subunit
PPEFFPBC_01686 1.9e-200 ylbM S Belongs to the UPF0348 family
PPEFFPBC_01687 2e-140 yqeM Q Methyltransferase domain protein
PPEFFPBC_01688 6e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PPEFFPBC_01689 4e-107 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
PPEFFPBC_01690 5e-116 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PPEFFPBC_01691 3.5e-49 yhbY J RNA-binding protein
PPEFFPBC_01692 7.1e-214 yqeH S in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
PPEFFPBC_01693 1.8e-98 yqeG S hydrolase of the HAD superfamily
PPEFFPBC_01694 4.7e-62 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PPEFFPBC_01695 4.5e-80 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PPEFFPBC_01696 1.6e-64
PPEFFPBC_01697 1.1e-272 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PPEFFPBC_01698 1.6e-269 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PPEFFPBC_01699 1.4e-47 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PPEFFPBC_01700 2.8e-257 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PPEFFPBC_01701 4.7e-96 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PPEFFPBC_01702 4.1e-122 hlpA M Belongs to the NlpA lipoprotein family
PPEFFPBC_01703 9.8e-100 pncA Q isochorismatase
PPEFFPBC_01704 2.8e-140 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
PPEFFPBC_01705 3.7e-240 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase
PPEFFPBC_01706 6.9e-75 XK27_03180 T universal stress protein
PPEFFPBC_01708 2e-157 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PPEFFPBC_01709 7.6e-239 hlyX S COG1253 Hemolysins and related proteins containing CBS domains
PPEFFPBC_01710 2.4e-144 modF 3.6.3.21, 3.6.3.34 P abc transporter atp-binding protein
PPEFFPBC_01711 0.0 yjcE P NhaP-type Na H and K H antiporters
PPEFFPBC_01713 1e-96 ytqB 2.1.1.176 J (SAM)-dependent
PPEFFPBC_01714 5.7e-180 yhcC S radical SAM protein
PPEFFPBC_01715 7.8e-194 ylbL T Belongs to the peptidase S16 family
PPEFFPBC_01716 1.7e-87 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PPEFFPBC_01717 4.3e-92 rsmD 2.1.1.171 L Methyltransferase
PPEFFPBC_01718 5.5e-172 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PPEFFPBC_01719 1.1e-09 S Protein of unknown function (DUF4059)
PPEFFPBC_01720 1.3e-131 tcyN 3.6.3.21 E abc transporter atp-binding protein
PPEFFPBC_01721 2.3e-162 yxeN P ABC transporter (Permease
PPEFFPBC_01722 9.1e-150 yxeM ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
PPEFFPBC_01724 8.8e-201 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PPEFFPBC_01725 0.0 pflB 2.3.1.54 C formate acetyltransferase'
PPEFFPBC_01726 7.2e-43 cah 4.2.1.1 P carbonic anhydrase
PPEFFPBC_01727 5.8e-39 cah 4.2.1.1 P carbonic anhydrase
PPEFFPBC_01728 1e-84 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PPEFFPBC_01729 1.6e-09 hsdS_1 3.1.21.3 V type I restriction modification DNA specificity domain
PPEFFPBC_01730 3.9e-42 D nuclear chromosome segregation
PPEFFPBC_01731 3.8e-31 D nuclear chromosome segregation
PPEFFPBC_01732 1.2e-32 L DNA integration
PPEFFPBC_01733 7.6e-118 XK27_05540 S Gram-negative-bacterium-type cell wall biogenesis
PPEFFPBC_01734 2.3e-123 ybbM S transport system, permease component
PPEFFPBC_01735 3e-116 ybbL S abc transporter atp-binding protein
PPEFFPBC_01736 3.1e-31
PPEFFPBC_01737 3.8e-184 ampC V COG1680 Beta-lactamase class C and other penicillin binding proteins
PPEFFPBC_01738 2.8e-137 cppA E CppA N-terminal
PPEFFPBC_01739 2.3e-164 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
PPEFFPBC_01740 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PPEFFPBC_01743 3e-47 spiA K sequence-specific DNA binding
PPEFFPBC_01744 2.1e-139 blpT
PPEFFPBC_01752 6.7e-26 S Bacteriocin class II with double-glycine leader peptide
PPEFFPBC_01755 1.6e-134 agrA KT phosphorelay signal transduction system
PPEFFPBC_01756 4.6e-236 blpH 2.7.13.3 T protein histidine kinase activity
PPEFFPBC_01758 7.3e-237 mesE M Transport protein ComB
PPEFFPBC_01759 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PPEFFPBC_01760 0.0 mdlB V abc transporter atp-binding protein
PPEFFPBC_01761 3e-153 mdlA V abc transporter atp-binding protein
PPEFFPBC_01762 3.4e-141 mdlA V abc transporter atp-binding protein
PPEFFPBC_01764 1.7e-93 XK27_09885 V Glycopeptide antibiotics resistance protein
PPEFFPBC_01765 3e-223 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PPEFFPBC_01766 2.4e-66 yutD J protein conserved in bacteria
PPEFFPBC_01767 1.9e-269 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PPEFFPBC_01769 1.4e-221 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PPEFFPBC_01770 6.3e-185 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PPEFFPBC_01771 0.0 ftsI 3.4.16.4 M penicillin-binding protein
PPEFFPBC_01772 4.3e-47 ftsL D cell division protein FtsL
PPEFFPBC_01773 3e-157 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PPEFFPBC_01774 1.6e-65
PPEFFPBC_01775 7.4e-27
PPEFFPBC_01776 2.6e-30
PPEFFPBC_01779 8.7e-33 yhaI J Protein of unknown function (DUF805)
PPEFFPBC_01780 4.5e-18 D nuclear chromosome segregation
PPEFFPBC_01781 4.5e-225 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PPEFFPBC_01782 1.7e-140 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PPEFFPBC_01783 8.3e-285 XK27_00765
PPEFFPBC_01784 8.1e-134 ecsA_2 V abc transporter atp-binding protein
PPEFFPBC_01785 6.8e-125 S Protein of unknown function (DUF554)
PPEFFPBC_01786 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PPEFFPBC_01787 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
PPEFFPBC_01788 2.6e-121 liaI S membrane
PPEFFPBC_01789 5.2e-75 XK27_02470 K LytTr DNA-binding domain
PPEFFPBC_01790 2e-52 KT response to antibiotic
PPEFFPBC_01791 1.4e-08 KT response to antibiotic
PPEFFPBC_01792 9.1e-18 KT response to antibiotic
PPEFFPBC_01793 9.8e-80 yebC M Membrane
PPEFFPBC_01794 1.1e-16 yebC M Membrane
PPEFFPBC_01795 2.6e-258 XK27_03190 S hydrolases of the HAD superfamily
PPEFFPBC_01796 1.5e-172 ansA 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
PPEFFPBC_01797 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PPEFFPBC_01798 1.8e-185 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PPEFFPBC_01799 3.1e-62 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PPEFFPBC_01800 2.5e-197 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PPEFFPBC_01801 3.8e-198 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PPEFFPBC_01802 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PPEFFPBC_01804 6.7e-189 manA 5.3.1.8 G mannose-6-phosphate isomerase
PPEFFPBC_01805 5.3e-172 scrK 2.7.1.2, 2.7.1.4 GK Fructokinase
PPEFFPBC_01806 0.0 scrA 2.7.1.211 G pts system
PPEFFPBC_01807 6.6e-289 scrB 3.2.1.26 GH32 G invertase
PPEFFPBC_01808 3.2e-178 scrR K Transcriptional
PPEFFPBC_01809 3.6e-73 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PPEFFPBC_01810 3.4e-62 yqhY S protein conserved in bacteria
PPEFFPBC_01811 9.3e-98 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PPEFFPBC_01812 1.1e-83 comEB 3.5.4.12 F ComE operon protein 2
PPEFFPBC_01813 7.2e-192 pepP 3.4.11.9, 3.4.13.9 E Belongs to the peptidase M24B family
PPEFFPBC_01816 2.6e-11 V 'abc transporter, ATP-binding protein
PPEFFPBC_01817 2.9e-58 V 'abc transporter, ATP-binding protein
PPEFFPBC_01823 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
PPEFFPBC_01824 5e-168 corA P COG0598 Mg2 and Co2 transporters
PPEFFPBC_01825 2e-123 XK27_01040 S Pfam PF06570
PPEFFPBC_01827 9.7e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PPEFFPBC_01828 2.7e-91 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PPEFFPBC_01829 3.9e-47 rpsF J Binds together with S18 to 16S ribosomal RNA
PPEFFPBC_01830 2.8e-41 XK27_05745
PPEFFPBC_01832 3.6e-229 mutY L A G-specific adenine glycosylase
PPEFFPBC_01836 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PPEFFPBC_01837 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PPEFFPBC_01838 6.7e-93 cvpA S toxin biosynthetic process
PPEFFPBC_01839 4.7e-14 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PPEFFPBC_01840 4.7e-160 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PPEFFPBC_01841 6.7e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PPEFFPBC_01842 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PPEFFPBC_01843 8.8e-48 azlD E branched-chain amino acid
PPEFFPBC_01844 1.9e-116 azlC E AzlC protein
PPEFFPBC_01845 1.9e-186 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PPEFFPBC_01846 1.3e-73 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PPEFFPBC_01847 2.1e-120 yeaZ 2.3.1.234 O COG1214, inactive homolog of metal-dependent proteases
PPEFFPBC_01848 2.5e-33 ykzG S Belongs to the UPF0356 family
PPEFFPBC_01849 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PPEFFPBC_01850 3.2e-41 pscB M CHAP domain protein
PPEFFPBC_01852 9.9e-263 glnA 6.3.1.2 E glutamine synthetase
PPEFFPBC_01853 8.5e-63 glnR K Transcriptional regulator
PPEFFPBC_01854 1.3e-87 S Fusaric acid resistance protein-like
PPEFFPBC_01855 1.5e-12
PPEFFPBC_01856 1.7e-221 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PPEFFPBC_01857 7.9e-41 L COG1943 Transposase and inactivated derivatives
PPEFFPBC_01858 9.7e-43 L transposase activity
PPEFFPBC_01859 2.9e-18 L Transposase
PPEFFPBC_01860 4e-54 L Transposase and inactivated derivatives
PPEFFPBC_01861 4.2e-28 L Integrase core domain protein
PPEFFPBC_01862 7.9e-188 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PPEFFPBC_01863 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PPEFFPBC_01864 4.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PPEFFPBC_01865 5.1e-69 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PPEFFPBC_01866 7e-142 purR 2.4.2.7 F operon repressor
PPEFFPBC_01867 3.6e-179 cbf S 3'-5' exoribonuclease yhaM
PPEFFPBC_01868 4.5e-172 rmuC S RmuC domain protein
PPEFFPBC_01869 1.2e-117 thiN 2.7.6.2 H thiamine pyrophosphokinase
PPEFFPBC_01870 1.1e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PPEFFPBC_01871 1.3e-162 rsgA 3.1.3.100 G One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PPEFFPBC_01873 8.9e-156 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PPEFFPBC_01874 3.2e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PPEFFPBC_01875 4.1e-144 tatD L Hydrolase, tatd
PPEFFPBC_01876 1.9e-74 yccU S CoA-binding protein
PPEFFPBC_01877 1.1e-50 trxA O Belongs to the thioredoxin family
PPEFFPBC_01878 7.8e-143 S Macro domain protein
PPEFFPBC_01879 2.8e-13 L thioesterase
PPEFFPBC_01880 2.2e-54 bta 1.8.1.8 CO cell redox homeostasis
PPEFFPBC_01881 9.3e-40 L Transposase
PPEFFPBC_01882 1e-140 L Transposase
PPEFFPBC_01884 1.3e-105 tnpR L Resolvase, N terminal domain
PPEFFPBC_01886 2e-24 S endonuclease activity
PPEFFPBC_01887 1.5e-08 S Addiction module antitoxin, RelB DinJ family
PPEFFPBC_01888 4.1e-28 S PFAM Uncharacterised protein family UPF0150
PPEFFPBC_01889 7.1e-31 S PFAM Uncharacterised protein family UPF0150
PPEFFPBC_01890 1.6e-275 U relaxase
PPEFFPBC_01891 3.7e-26 S Bacterial mobilisation protein (MobC)
PPEFFPBC_01893 0.0 2.1.1.72, 3.1.21.3 L Psort location Cytoplasmic, score
PPEFFPBC_01894 0.0 topB 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PPEFFPBC_01897 0.0 U An automated process has identified a potential problem with this gene model
PPEFFPBC_01898 8e-45 S Protein of unknown function (DUF3801)
PPEFFPBC_01899 8.2e-55
PPEFFPBC_01901 2.3e-63 ssb L single-stranded DNA binding
PPEFFPBC_01902 2e-101
PPEFFPBC_01903 0.0 M CHAP domain protein
PPEFFPBC_01904 0.0 U Psort location Cytoplasmic, score
PPEFFPBC_01905 3.5e-42 S PrgI family protein
PPEFFPBC_01906 1.1e-82
PPEFFPBC_01907 1.1e-26
PPEFFPBC_01908 8.9e-15
PPEFFPBC_01909 0.0 D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
PPEFFPBC_01910 3e-33 MU outer membrane autotransporter barrel domain protein
PPEFFPBC_01911 3.3e-10
PPEFFPBC_01913 4.8e-87 repA S Replication initiator protein A
PPEFFPBC_01916 3.2e-184 jag S RNA-binding protein
PPEFFPBC_01917 8.5e-141 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PPEFFPBC_01918 1.3e-54 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PPEFFPBC_01919 4.6e-263 argH 4.3.2.1 E Argininosuccinate lyase
PPEFFPBC_01920 2.9e-229 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PPEFFPBC_01921 1.5e-280 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PPEFFPBC_01922 1.6e-62 amiA E transmembrane transport
PPEFFPBC_01923 3e-182 amiA E ABC transporter, substrate-binding protein, family 5
PPEFFPBC_01924 1.8e-119 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PPEFFPBC_01925 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PPEFFPBC_01926 3.5e-50 S Protein of unknown function (DUF3397)
PPEFFPBC_01927 2e-88 cah 4.2.1.1 P Reversible hydration of carbon dioxide
PPEFFPBC_01928 9.3e-34 WQ51_05710 S Mitochondrial biogenesis AIM24
PPEFFPBC_01929 6.8e-32 WQ51_05710 S Mitochondrial biogenesis AIM24
PPEFFPBC_01930 1.4e-11 WQ51_05710 S Mitochondrial biogenesis AIM24
PPEFFPBC_01931 9.9e-225 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PPEFFPBC_01932 2.4e-75 3.5.1.19 Q hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
PPEFFPBC_01933 7e-80 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
PPEFFPBC_01934 1.8e-19 XK27_09620 S FMN reductase (NADPH) activity
PPEFFPBC_01935 4.6e-35 XK27_09620 S FMN reductase (NADPH) activity
PPEFFPBC_01936 9.7e-220 XK27_09615 C reductase
PPEFFPBC_01937 2.1e-91 fnt P Formate nitrite transporter
PPEFFPBC_01938 3.5e-32 XK27_08585 S Psort location CytoplasmicMembrane, score
PPEFFPBC_01939 4.7e-29 XK27_08585 S Psort location CytoplasmicMembrane, score
PPEFFPBC_01940 4.4e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PPEFFPBC_01941 4.8e-168 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PPEFFPBC_01942 2.6e-118 gluP 3.4.21.105 O membrane protein (homolog of Drosophila rhomboid)
PPEFFPBC_01943 2.9e-93 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PPEFFPBC_01944 1e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PPEFFPBC_01945 8.1e-59 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PPEFFPBC_01946 7.8e-48 S glycolate biosynthetic process
PPEFFPBC_01947 4.9e-63 S phosphatase activity
PPEFFPBC_01948 6.3e-159 rrmA 2.1.1.187 Q methyltransferase
PPEFFPBC_01951 1.2e-91 tadA 3.5.4.1, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PPEFFPBC_01952 5.1e-66 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PPEFFPBC_01953 4.1e-36 yeeD O sulfur carrier activity
PPEFFPBC_01954 2.8e-188 yeeE S Sulphur transport
PPEFFPBC_01955 3.9e-113 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PPEFFPBC_01956 2.1e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PPEFFPBC_01957 1.8e-09 S Domain of unknown function (DUF4651)
PPEFFPBC_01958 3.7e-204 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
PPEFFPBC_01959 3.9e-131 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PPEFFPBC_01960 3.3e-110 S CAAX amino terminal protease family protein
PPEFFPBC_01962 4.2e-66 V CAAX protease self-immunity
PPEFFPBC_01963 1.3e-31 V CAAX protease self-immunity
PPEFFPBC_01964 2.6e-26 lanR K sequence-specific DNA binding
PPEFFPBC_01965 3.2e-220 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PPEFFPBC_01966 4.2e-175 ytxK 2.1.1.72 L DNA methylase
PPEFFPBC_01967 2.2e-11 comGF U Putative Competence protein ComGF
PPEFFPBC_01968 3.8e-70 comGF U Competence protein ComGF
PPEFFPBC_01969 3.2e-15 NU Type II secretory pathway pseudopilin
PPEFFPBC_01970 2.6e-56 cglD NU Competence protein
PPEFFPBC_01971 8.5e-43 comGC U Required for transformation and DNA binding
PPEFFPBC_01972 4.5e-152 cglB NU type II secretion system
PPEFFPBC_01973 1.4e-175 comGA NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
PPEFFPBC_01974 3.2e-67 S cog cog4699
PPEFFPBC_01975 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PPEFFPBC_01976 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PPEFFPBC_01977 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PPEFFPBC_01978 9.3e-239 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PPEFFPBC_01979 1.6e-196 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PPEFFPBC_01980 5e-76 ilvN 2.2.1.6 E Acetolactate synthase
PPEFFPBC_01981 0.0 ilvB 2.2.1.6 EH Acetolactate synthase
PPEFFPBC_01982 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
PPEFFPBC_01983 6.7e-301 yloV S kinase related to dihydroxyacetone kinase
PPEFFPBC_01984 1.8e-57 asp S cog cog1302
PPEFFPBC_01985 1.3e-224 norN V Mate efflux family protein
PPEFFPBC_01986 1.9e-278 thrC 4.2.3.1 E Threonine synthase
PPEFFPBC_01987 3.2e-65 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PPEFFPBC_01988 8e-35 adhE 1.1.1.1, 1.2.1.10 C hydroxyacid-oxoacid transhydrogenase activity
PPEFFPBC_01989 1.1e-65 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PPEFFPBC_01990 2.6e-136 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PPEFFPBC_01991 1.4e-63 adhE 1.1.1.1, 1.2.1.10 C Dehydrogenase
PPEFFPBC_01992 0.0 pepO 3.4.24.71 O Peptidase family M13
PPEFFPBC_01993 1e-35 treC 3.2.1.93 GH13 G COG0366 Glycosidases
PPEFFPBC_01994 4.1e-70 treC 3.2.1.93 GH13 G COG0366 Glycosidases
PPEFFPBC_01995 5.6e-64 treC 3.2.1.93 GH13 G COG0366 Glycosidases
PPEFFPBC_01996 1.4e-54 treB 2.7.1.201 G PTS System
PPEFFPBC_01997 2.2e-20 treR K DNA-binding transcription factor activity
PPEFFPBC_01998 8.6e-87 treR K trehalose operon
PPEFFPBC_01999 5.7e-95 ywlG S Belongs to the UPF0340 family
PPEFFPBC_02002 3.8e-90 3.6.4.12 K Divergent AAA domain protein
PPEFFPBC_02003 1.8e-181 EGP Major facilitator Superfamily
PPEFFPBC_02004 4e-229 spaC2 V Lanthionine synthetase C family protein
PPEFFPBC_02005 0.0 S Lantibiotic dehydratase, C terminus
PPEFFPBC_02007 2e-58 K Peptidase S24-like protein
PPEFFPBC_02008 5.2e-16 E IrrE N-terminal-like domain
PPEFFPBC_02009 2.5e-69 E IrrE N-terminal-like domain
PPEFFPBC_02010 2.9e-134 int L Belongs to the 'phage' integrase family
PPEFFPBC_02012 1.7e-98 dam 2.1.1.72 L site-specific DNA-methyltransferase (Adenine-specific)
PPEFFPBC_02013 2.4e-88 S AlwI restriction endonuclease
PPEFFPBC_02015 3.1e-76 E IrrE N-terminal-like domain
PPEFFPBC_02016 1.3e-29
PPEFFPBC_02017 1.3e-36
PPEFFPBC_02018 6.8e-222 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PPEFFPBC_02019 3.8e-85 K Peptidase S24-like protein
PPEFFPBC_02020 6.5e-36
PPEFFPBC_02023 4e-38
PPEFFPBC_02024 4.4e-26 K Helix-turn-helix XRE-family like proteins
PPEFFPBC_02025 2.3e-42
PPEFFPBC_02026 6.6e-73
PPEFFPBC_02027 3.5e-273 ydcQ D Ftsk spoiiie family protein
PPEFFPBC_02028 1.8e-223 K Replication initiation factor
PPEFFPBC_02029 2.1e-32
PPEFFPBC_02030 7.9e-89
PPEFFPBC_02031 1.2e-161 S Conjugative transposon protein TcpC
PPEFFPBC_02032 3.2e-33
PPEFFPBC_02033 7.9e-70 S TcpE family
PPEFFPBC_02034 0.0 yddE S AAA-like domain
PPEFFPBC_02035 8.7e-265
PPEFFPBC_02036 4.4e-30
PPEFFPBC_02037 1.7e-167 isp2 S pathogenesis
PPEFFPBC_02038 8.8e-16
PPEFFPBC_02039 6.4e-185 L Phage integrase family
PPEFFPBC_02040 2.8e-165 fba 4.1.2.13, 4.1.2.29 G aldolase
PPEFFPBC_02042 2.1e-64 6.3.2.2 H ergothioneine biosynthetic process
PPEFFPBC_02043 3.4e-116 6.3.2.2 H gamma-glutamylcysteine synthetase
PPEFFPBC_02044 9.4e-12 6.3.2.2 H gamma-glutamylcysteine synthetase
PPEFFPBC_02045 2.7e-13 L PFAM Integrase, catalytic core
PPEFFPBC_02046 7.1e-72 L PFAM Integrase, catalytic core
PPEFFPBC_02047 3.3e-62 rplQ J ribosomal protein l17
PPEFFPBC_02048 6.2e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PPEFFPBC_02049 9.6e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PPEFFPBC_02050 4e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PPEFFPBC_02051 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PPEFFPBC_02052 5.9e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PPEFFPBC_02053 9.2e-121 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PPEFFPBC_02054 5.1e-232 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PPEFFPBC_02055 1.3e-57 rplO J binds to the 23S rRNA
PPEFFPBC_02056 2.5e-23 rpmD J ribosomal protein l30
PPEFFPBC_02057 1.7e-79 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PPEFFPBC_02058 1.9e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PPEFFPBC_02059 2.3e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PPEFFPBC_02060 1.2e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PPEFFPBC_02061 1.5e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PPEFFPBC_02062 1.2e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PPEFFPBC_02063 1.1e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PPEFFPBC_02064 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PPEFFPBC_02065 6e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PPEFFPBC_02066 2.7e-26 rpmC J Belongs to the universal ribosomal protein uL29 family
PPEFFPBC_02067 1e-69 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PPEFFPBC_02068 7.5e-115 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PPEFFPBC_02069 7.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PPEFFPBC_02070 4.9e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PPEFFPBC_02071 2.6e-152 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PPEFFPBC_02072 2.4e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PPEFFPBC_02073 2.2e-103 rplD J Forms part of the polypeptide exit tunnel
PPEFFPBC_02074 1.8e-110 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PPEFFPBC_02075 2.9e-48 rpsJ J Involved in the binding of tRNA to the ribosomes
PPEFFPBC_02076 3e-187 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PPEFFPBC_02077 0.0 XK27_09800 I Acyltransferase
PPEFFPBC_02078 1.7e-35 XK27_09805 S MORN repeat protein
PPEFFPBC_02079 1e-80 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PPEFFPBC_02080 4.1e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PPEFFPBC_02081 8.8e-83 adk 2.7.4.3 F topology modulation protein
PPEFFPBC_02082 1.7e-86 yxaM EGP Major facilitator Superfamily
PPEFFPBC_02083 1.9e-197 2.7.7.73, 2.7.7.80 H Involved in molybdopterin and thiamine biosynthesis, family 2
PPEFFPBC_02085 3.4e-155 Z012_04635 K Transcriptional activator, Rgg GadR MutR family
PPEFFPBC_02086 4.8e-58 KLT serine threonine protein kinase
PPEFFPBC_02087 0.0 KLT serine threonine protein kinase
PPEFFPBC_02088 2.1e-280 V ABC transporter
PPEFFPBC_02090 1.1e-236 rarA L ATPase related to the helicase subunit of the Holliday junction resolvase
PPEFFPBC_02091 5.5e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PPEFFPBC_02092 2.2e-44 yrzL S Belongs to the UPF0297 family
PPEFFPBC_02093 1.2e-70 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PPEFFPBC_02094 4.2e-44 yrzB S Belongs to the UPF0473 family
PPEFFPBC_02095 4.4e-297 ccs S the current gene model (or a revised gene model) may contain a frame shift
PPEFFPBC_02096 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PPEFFPBC_02097 7.5e-14
PPEFFPBC_02098 1.1e-89 XK27_10930 K acetyltransferase
PPEFFPBC_02099 2.8e-116 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PPEFFPBC_02100 1.4e-142 yaaA S Belongs to the UPF0246 family
PPEFFPBC_02101 3.5e-166 XK27_01785 S cog cog1284
PPEFFPBC_02102 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PPEFFPBC_02104 1e-240 hisS 6.1.1.21 J histidyl-tRNA synthetase
PPEFFPBC_02105 4e-53 metE 2.1.1.14 E Methionine synthase
PPEFFPBC_02106 2.6e-64 metE 2.1.1.14 E Methionine synthase
PPEFFPBC_02107 1.4e-36 metE 2.1.1.14 E Methionine synthase
PPEFFPBC_02108 2e-25 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PPEFFPBC_02109 6.7e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PPEFFPBC_02112 5.8e-19 K Replication initiation factor
PPEFFPBC_02113 4.8e-48 S Protein of unknown function with HXXEE motif
PPEFFPBC_02115 3.7e-27 S Membrane
PPEFFPBC_02116 1.7e-99
PPEFFPBC_02117 1.8e-23 S Small integral membrane protein
PPEFFPBC_02118 6.5e-83 M Protein conserved in bacteria
PPEFFPBC_02119 1.1e-11 K CsbD-like
PPEFFPBC_02120 3.6e-34 L Transposase
PPEFFPBC_02121 7.3e-48 K Peptidase S24-like protein
PPEFFPBC_02122 7.1e-09 K Peptidase S24-like protein
PPEFFPBC_02123 3e-55 E IrrE N-terminal-like domain
PPEFFPBC_02124 1.6e-49 E IrrE N-terminal-like domain
PPEFFPBC_02125 2e-11 C Arylsulfatase regulator (Fe-S oxidoreductase)
PPEFFPBC_02126 1.4e-113 K sequence-specific DNA binding
PPEFFPBC_02127 4.6e-18 L COG2801 Transposase and inactivated derivatives
PPEFFPBC_02128 8.3e-106 S Putative adhesin
PPEFFPBC_02129 4e-158 XK27_06930 V domain protein
PPEFFPBC_02130 5.4e-95 XK27_06935 K transcriptional regulator
PPEFFPBC_02131 2.9e-52 ypaA S membrane
PPEFFPBC_02132 2e-07
PPEFFPBC_02133 4.9e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PPEFFPBC_02134 8.2e-48 veg S Biofilm formation stimulator VEG
PPEFFPBC_02135 1.5e-245 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PPEFFPBC_02136 8.5e-73 rplI J binds to the 23S rRNA
PPEFFPBC_02137 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PPEFFPBC_02138 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PPEFFPBC_02139 2e-74 F NUDIX domain
PPEFFPBC_02140 2.4e-214 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PPEFFPBC_02141 6.8e-301 S Bacterial membrane protein, YfhO
PPEFFPBC_02142 1.5e-32 isaA GH23 M Immunodominant staphylococcal antigen A
PPEFFPBC_02143 3.9e-80 lytE M LysM domain protein
PPEFFPBC_02144 1e-134 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PPEFFPBC_02145 2.6e-152 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PPEFFPBC_02146 6.3e-151 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PPEFFPBC_02147 4.1e-90 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PPEFFPBC_02148 7e-137 ymfM S sequence-specific DNA binding
PPEFFPBC_02149 3.3e-239 ymfH S Peptidase M16
PPEFFPBC_02150 6.4e-232 ymfF S Peptidase M16
PPEFFPBC_02151 1.5e-43 yaaA S S4 domain protein YaaA
PPEFFPBC_02153 2.5e-203 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PPEFFPBC_02154 4.7e-274 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PPEFFPBC_02155 1.8e-192 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
PPEFFPBC_02156 5.4e-153 yvjA S membrane
PPEFFPBC_02157 6.7e-306 ybiT S abc transporter atp-binding protein
PPEFFPBC_02158 0.0 XK27_10405 S Bacterial membrane protein YfhO
PPEFFPBC_02162 1.4e-119 yoaK S Psort location CytoplasmicMembrane, score
PPEFFPBC_02163 7.3e-86 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PPEFFPBC_02164 1.5e-196 htrA 3.4.21.107 O Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain'
PPEFFPBC_02165 1e-134 parB K Belongs to the ParB family
PPEFFPBC_02166 4.8e-257 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PPEFFPBC_02167 2.4e-201 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PPEFFPBC_02168 4.1e-29 yyzM S Protein conserved in bacteria
PPEFFPBC_02169 8.6e-204 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PPEFFPBC_02170 1.4e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PPEFFPBC_02171 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PPEFFPBC_02172 1.7e-39 yabO J Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
PPEFFPBC_02173 7.9e-61 divIC D Septum formation initiator
PPEFFPBC_02175 1.5e-239 XK27_09285 3.5.2.6 V Beta-lactamase enzyme family
PPEFFPBC_02176 5.5e-239 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PPEFFPBC_02177 3.4e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PPEFFPBC_02178 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PPEFFPBC_02179 1.7e-162 L Transposase
PPEFFPBC_02180 3.3e-35 L Integrase core domain protein
PPEFFPBC_02181 8e-32 L Belongs to the 'phage' integrase family
PPEFFPBC_02182 4.2e-128 S Protein of unknown function (DUF2971)
PPEFFPBC_02183 1.8e-127 tnp L Transposase
PPEFFPBC_02184 3.3e-247 G polysaccharide deacetylase
PPEFFPBC_02185 9.4e-32 dhaL 2.7.1.121 G Dihydroxyacetone kinase
PPEFFPBC_02186 0.0 tetP J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PPEFFPBC_02187 6.3e-12 S Conjugative transposon protein TcpC
PPEFFPBC_02188 6.2e-128 tnp L Transposase IS66 family
PPEFFPBC_02190 7e-40 S Filamentation induced by cAMP protein fic
PPEFFPBC_02191 1.9e-107 K Cro/C1-type HTH DNA-binding domain
PPEFFPBC_02192 8.8e-170 bcrA V ABC transporter
PPEFFPBC_02193 9.8e-127 S ABC-2 family transporter protein
PPEFFPBC_02194 1.1e-142 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PPEFFPBC_02196 6.8e-184 L PFAM transposase, IS4 family protein
PPEFFPBC_02197 2.8e-165 S Nucleotidyltransferase domain
PPEFFPBC_02198 1.2e-140 Q Protein of unknown function (DUF1698)
PPEFFPBC_02199 1.4e-21 O DnaJ molecular chaperone homology domain
PPEFFPBC_02200 2.1e-54
PPEFFPBC_02201 1.6e-118 2.7.1.176 S Zeta toxin
PPEFFPBC_02202 7e-242 ltrA_1 L Reverse transcriptase (RNA-dependent DNA polymerase)
PPEFFPBC_02203 3.3e-30 S Antidote-toxin recognition MazE, bacterial antitoxin
PPEFFPBC_02204 1e-69 doc S Prophage maintenance system killer protein
PPEFFPBC_02205 8.9e-223 L to GB X15145, SP P26998, PID 1340164, GB X15145, SP P26998, and PID 1340164
PPEFFPBC_02206 2.3e-41 S Bacterial epsilon antitoxin
PPEFFPBC_02207 2.8e-31 S Omega Transcriptional Repressor
PPEFFPBC_02208 8.4e-60 D AAA domain
PPEFFPBC_02209 1.8e-14 M domain protein

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)