ORF_ID e_value Gene_name EC_number CAZy COGs Description
PDDOOAAC_00001 3.1e-167 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
PDDOOAAC_00002 0.0 S membrane
PDDOOAAC_00003 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
PDDOOAAC_00004 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PDDOOAAC_00005 2.5e-98 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PDDOOAAC_00006 2.7e-115 gluP 3.4.21.105 S Rhomboid family
PDDOOAAC_00007 5.6e-33 yqgQ S Bacterial protein of unknown function (DUF910)
PDDOOAAC_00008 1.5e-68 yqhL P Rhodanese-like protein
PDDOOAAC_00009 6.7e-170 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PDDOOAAC_00010 1e-33 ynbB 4.4.1.1 P aluminum resistance
PDDOOAAC_00011 3.3e-169 ynbB 4.4.1.1 P aluminum resistance
PDDOOAAC_00012 1.2e-260 glnA 6.3.1.2 E glutamine synthetase
PDDOOAAC_00013 1.9e-134
PDDOOAAC_00014 2.7e-163
PDDOOAAC_00015 4.4e-146
PDDOOAAC_00016 3.6e-79 L COG2963 Transposase and inactivated derivatives
PDDOOAAC_00017 7.5e-191 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PDDOOAAC_00018 2.3e-167 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
PDDOOAAC_00019 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PDDOOAAC_00020 3.3e-186 lacR K Transcriptional regulator
PDDOOAAC_00021 2.6e-219 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PDDOOAAC_00022 5.9e-285 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PDDOOAAC_00023 3.8e-195 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PDDOOAAC_00024 3.2e-245 S SLAP domain
PDDOOAAC_00025 2.5e-23 2.7.6.5 T Region found in RelA / SpoT proteins
PDDOOAAC_00026 8.2e-51 2.7.6.5 T Region found in RelA / SpoT proteins
PDDOOAAC_00027 3.5e-99 sptS 2.7.13.3 T Histidine kinase
PDDOOAAC_00028 7.5e-57 sptS 2.7.13.3 T Histidine kinase
PDDOOAAC_00029 4.7e-208 EGP Major facilitator Superfamily
PDDOOAAC_00030 1.6e-70 O OsmC-like protein
PDDOOAAC_00031 1.3e-125 dkgA 1.1.1.346 S L-ascorbic acid biosynthetic process
PDDOOAAC_00032 6e-83
PDDOOAAC_00033 1.1e-201
PDDOOAAC_00034 1.3e-271 yjeM E Amino Acid
PDDOOAAC_00035 9.7e-88 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PDDOOAAC_00036 1.8e-193 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
PDDOOAAC_00039 5e-90
PDDOOAAC_00040 3.8e-220 S response to antibiotic
PDDOOAAC_00041 3.6e-142 mrr L restriction endonuclease
PDDOOAAC_00043 8.5e-218 S SLAP domain
PDDOOAAC_00045 8.3e-31
PDDOOAAC_00047 1.7e-19 S Metal binding domain of Ada
PDDOOAAC_00048 2.1e-56 L nuclease
PDDOOAAC_00049 2.2e-122 F DNA/RNA non-specific endonuclease
PDDOOAAC_00050 3e-26
PDDOOAAC_00051 7.4e-127 G Peptidase_C39 like family
PDDOOAAC_00052 9.1e-33 M NlpC/P60 family
PDDOOAAC_00053 2.2e-46 M NlpC/P60 family
PDDOOAAC_00054 4.8e-48 M NlpC/P60 family
PDDOOAAC_00055 3.4e-52 S Iron-sulfur cluster assembly protein
PDDOOAAC_00056 1.1e-145 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PDDOOAAC_00057 1.3e-119 sdaAB 4.3.1.17 E Serine dehydratase beta chain
PDDOOAAC_00058 1.8e-47
PDDOOAAC_00059 7.1e-207 G Major Facilitator Superfamily
PDDOOAAC_00060 0.0 3.6.3.8 P P-type ATPase
PDDOOAAC_00061 1.7e-160 yufQ S Belongs to the binding-protein-dependent transport system permease family
PDDOOAAC_00062 1.5e-166 yufP S Belongs to the binding-protein-dependent transport system permease family
PDDOOAAC_00063 2.3e-247 xylG 3.6.3.17 S ABC transporter
PDDOOAAC_00064 1.2e-178 tcsA S ABC transporter substrate-binding protein PnrA-like
PDDOOAAC_00065 1.8e-84 2.4.2.6 F Nucleoside 2-deoxyribosyltransferase
PDDOOAAC_00066 7e-11 S RelB antitoxin
PDDOOAAC_00067 8.2e-111 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PDDOOAAC_00068 4e-122 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PDDOOAAC_00069 8.5e-165 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PDDOOAAC_00070 2.3e-93 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PDDOOAAC_00071 1.5e-180 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PDDOOAAC_00072 2.3e-240 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PDDOOAAC_00073 5.1e-209 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PDDOOAAC_00074 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PDDOOAAC_00075 2.6e-38
PDDOOAAC_00077 1.3e-142 glcU U sugar transport
PDDOOAAC_00078 1.1e-46
PDDOOAAC_00079 1.4e-77 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PDDOOAAC_00080 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PDDOOAAC_00081 6.9e-62 S Bacterial PH domain
PDDOOAAC_00082 4e-27
PDDOOAAC_00083 2.3e-65 arsC 1.20.4.1 P Belongs to the ArsC family
PDDOOAAC_00084 6.1e-176 I Carboxylesterase family
PDDOOAAC_00086 3.7e-200 M Glycosyl hydrolases family 25
PDDOOAAC_00087 0.0 S Predicted membrane protein (DUF2207)
PDDOOAAC_00088 2.1e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PDDOOAAC_00089 3.4e-123 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
PDDOOAAC_00090 1.5e-197 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PDDOOAAC_00091 7.7e-255 S Uncharacterized protein conserved in bacteria (DUF2325)
PDDOOAAC_00092 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
PDDOOAAC_00093 1e-47 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PDDOOAAC_00094 4.1e-198 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PDDOOAAC_00095 1.4e-101 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PDDOOAAC_00096 2.4e-69 yqhY S Asp23 family, cell envelope-related function
PDDOOAAC_00097 1.4e-63 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PDDOOAAC_00098 6.9e-153 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PDDOOAAC_00099 3.4e-194 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDDOOAAC_00100 2.1e-22 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDDOOAAC_00101 3.6e-157 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PDDOOAAC_00102 8.1e-151 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PDDOOAAC_00103 1.1e-306 recN L May be involved in recombinational repair of damaged DNA
PDDOOAAC_00104 1e-78 6.3.3.2 S ASCH
PDDOOAAC_00105 1.8e-110 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PDDOOAAC_00106 9.4e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PDDOOAAC_00107 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PDDOOAAC_00108 6.7e-173 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PDDOOAAC_00109 5.4e-245 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PDDOOAAC_00110 1e-145 stp 3.1.3.16 T phosphatase
PDDOOAAC_00111 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
PDDOOAAC_00112 9.7e-166 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PDDOOAAC_00113 2.6e-115 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PDDOOAAC_00114 6.4e-125 thiN 2.7.6.2 H thiamine pyrophosphokinase
PDDOOAAC_00115 1.1e-47
PDDOOAAC_00116 2.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PDDOOAAC_00117 6.8e-57 asp S Asp23 family, cell envelope-related function
PDDOOAAC_00118 9.9e-305 yloV S DAK2 domain fusion protein YloV
PDDOOAAC_00119 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PDDOOAAC_00120 2.1e-180 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PDDOOAAC_00121 1.7e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PDDOOAAC_00122 2e-194 oppD P Belongs to the ABC transporter superfamily
PDDOOAAC_00123 5.3e-181 oppF P Belongs to the ABC transporter superfamily
PDDOOAAC_00124 2.5e-175 oppB P ABC transporter permease
PDDOOAAC_00125 3.3e-148 oppC P Binding-protein-dependent transport system inner membrane component
PDDOOAAC_00126 0.0 oppA E ABC transporter substrate-binding protein
PDDOOAAC_00127 0.0 oppA E ABC transporter substrate-binding protein
PDDOOAAC_00128 1.3e-125 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PDDOOAAC_00129 0.0 smc D Required for chromosome condensation and partitioning
PDDOOAAC_00130 1.3e-166 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PDDOOAAC_00131 1.7e-289 pipD E Dipeptidase
PDDOOAAC_00132 4e-43
PDDOOAAC_00133 1.5e-256 yfnA E amino acid
PDDOOAAC_00134 3.2e-56 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PDDOOAAC_00135 3.8e-228 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PDDOOAAC_00136 4.5e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PDDOOAAC_00137 1.4e-92 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PDDOOAAC_00138 1.7e-136 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PDDOOAAC_00139 5.5e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PDDOOAAC_00140 6.4e-99 ung2 3.2.2.27 L Uracil-DNA glycosylase
PDDOOAAC_00141 3.4e-146 E GDSL-like Lipase/Acylhydrolase family
PDDOOAAC_00142 2.8e-111 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PDDOOAAC_00143 7.4e-37 ynzC S UPF0291 protein
PDDOOAAC_00144 4.2e-30 yneF S Uncharacterised protein family (UPF0154)
PDDOOAAC_00145 1.6e-297 mdlA V ABC transporter
PDDOOAAC_00146 2.1e-300 mdlB V ABC transporter
PDDOOAAC_00147 0.0 pepO 3.4.24.71 O Peptidase family M13
PDDOOAAC_00148 1.5e-227 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PDDOOAAC_00149 5.1e-113 plsC 2.3.1.51 I Acyltransferase
PDDOOAAC_00150 4.2e-197 yabB 2.1.1.223 L Methyltransferase small domain
PDDOOAAC_00151 1.4e-139 rpsB J Belongs to the universal ribosomal protein uS2 family
PDDOOAAC_00152 8.3e-185 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PDDOOAAC_00153 7e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PDDOOAAC_00154 7.6e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PDDOOAAC_00155 1.6e-137 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PDDOOAAC_00156 5.1e-145 cdsA 2.7.7.41 I Belongs to the CDS family
PDDOOAAC_00157 2.6e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PDDOOAAC_00158 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PDDOOAAC_00159 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDDOOAAC_00160 6.7e-81 rimP J Required for maturation of 30S ribosomal subunits
PDDOOAAC_00161 2.9e-194 nusA K Participates in both transcription termination and antitermination
PDDOOAAC_00162 1.2e-46 ylxR K Protein of unknown function (DUF448)
PDDOOAAC_00163 1.2e-46 rplGA J ribosomal protein
PDDOOAAC_00164 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PDDOOAAC_00165 1.1e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PDDOOAAC_00166 2.8e-165 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PDDOOAAC_00167 1.4e-175 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PDDOOAAC_00168 1.2e-186 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PDDOOAAC_00169 1.3e-81 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PDDOOAAC_00170 0.0 dnaK O Heat shock 70 kDa protein
PDDOOAAC_00171 6e-200 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PDDOOAAC_00172 2.1e-20
PDDOOAAC_00173 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PDDOOAAC_00174 1.9e-116 srtA 3.4.22.70 M sortase family
PDDOOAAC_00175 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PDDOOAAC_00176 7e-95 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PDDOOAAC_00177 3e-122 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PDDOOAAC_00178 2.6e-30 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PDDOOAAC_00179 1.1e-147 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PDDOOAAC_00180 1.6e-248 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDDOOAAC_00181 7.6e-83 3.4.21.96 S SLAP domain
PDDOOAAC_00182 0.0 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
PDDOOAAC_00183 1.3e-154 lysR5 K LysR substrate binding domain
PDDOOAAC_00184 9.2e-26 arcA 3.5.3.6 E Arginine
PDDOOAAC_00185 8.4e-166 arcA 3.5.3.6 E Arginine
PDDOOAAC_00186 1.4e-187 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PDDOOAAC_00187 1.1e-31 arcC 2.7.2.2 E Belongs to the carbamate kinase family
PDDOOAAC_00188 6.7e-125 arcC 2.7.2.2 E Belongs to the carbamate kinase family
PDDOOAAC_00189 6.4e-96 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PDDOOAAC_00190 5.3e-212 S Sterol carrier protein domain
PDDOOAAC_00191 1.2e-18
PDDOOAAC_00192 3.5e-106 K LysR substrate binding domain
PDDOOAAC_00193 5.6e-42
PDDOOAAC_00194 2.9e-28
PDDOOAAC_00195 1.1e-102 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
PDDOOAAC_00196 1.5e-26 lysC 2.7.2.4 E Belongs to the aspartokinase family
PDDOOAAC_00197 5.1e-84 lysC 2.7.2.4 E Belongs to the aspartokinase family
PDDOOAAC_00198 4.8e-115 lysC 2.7.2.4 E Belongs to the aspartokinase family
PDDOOAAC_00199 1.3e-244 thrC 4.2.3.1 E Threonine synthase
PDDOOAAC_00200 4.7e-122 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
PDDOOAAC_00201 1.2e-23 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
PDDOOAAC_00202 9.7e-82 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PDDOOAAC_00203 1.1e-37 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PDDOOAAC_00204 1.4e-105
PDDOOAAC_00205 9.3e-161 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PDDOOAAC_00206 8e-106 S Peptidase family M23
PDDOOAAC_00207 9.8e-152 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PDDOOAAC_00208 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PDDOOAAC_00209 2.7e-68 yqeY S YqeY-like protein
PDDOOAAC_00210 1.2e-174 phoH T phosphate starvation-inducible protein PhoH
PDDOOAAC_00211 2.7e-91 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PDDOOAAC_00212 8.1e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PDDOOAAC_00213 1.7e-59 L Belongs to the 'phage' integrase family
PDDOOAAC_00219 1.2e-10 E Zn peptidase
PDDOOAAC_00220 2.2e-25 K Cro/C1-type HTH DNA-binding domain
PDDOOAAC_00222 2.2e-81 ps308 K AntA/AntB antirepressor
PDDOOAAC_00227 2.7e-17
PDDOOAAC_00230 2.1e-36 S Protein of unknown function (DUF1351)
PDDOOAAC_00231 4.7e-47 S ERF superfamily
PDDOOAAC_00232 1.8e-62 L DnaD domain protein
PDDOOAAC_00249 2e-41 S VRR_NUC
PDDOOAAC_00250 2.9e-07
PDDOOAAC_00254 2.7e-20 ps333 L Terminase small subunit
PDDOOAAC_00255 8.7e-204 S Terminase-like family
PDDOOAAC_00256 1e-137 S Protein of unknown function (DUF1073)
PDDOOAAC_00257 8.8e-49 S Phage Mu protein F like protein
PDDOOAAC_00258 2.1e-10 S Lysin motif
PDDOOAAC_00259 5.7e-52 S Uncharacterized protein conserved in bacteria (DUF2213)
PDDOOAAC_00260 5.7e-34
PDDOOAAC_00261 5e-91 Z012_11565 S Uncharacterized protein conserved in bacteria (DUF2184)
PDDOOAAC_00262 1.4e-20 S Protein of unknown function (DUF4054)
PDDOOAAC_00263 9e-31
PDDOOAAC_00264 1.5e-28
PDDOOAAC_00265 1.7e-35
PDDOOAAC_00266 6.9e-104 Z012_02110 S Protein of unknown function (DUF3383)
PDDOOAAC_00267 1.4e-29
PDDOOAAC_00268 5.3e-11
PDDOOAAC_00270 9e-206 3.4.14.13 M Phage tail tape measure protein TP901
PDDOOAAC_00271 8.7e-54 M LysM domain
PDDOOAAC_00272 2.3e-37
PDDOOAAC_00273 2.8e-111
PDDOOAAC_00274 1.5e-44
PDDOOAAC_00275 2.1e-32
PDDOOAAC_00276 1.2e-123 Z012_12235 S Baseplate J-like protein
PDDOOAAC_00277 2.9e-10
PDDOOAAC_00278 3.8e-36
PDDOOAAC_00279 3.7e-137
PDDOOAAC_00284 1.3e-57
PDDOOAAC_00285 4.6e-20 S Phage uncharacterised protein (Phage_XkdX)
PDDOOAAC_00286 6e-17
PDDOOAAC_00287 4.6e-16
PDDOOAAC_00288 3.6e-22
PDDOOAAC_00289 1.5e-155 M Glycosyl hydrolases family 25
PDDOOAAC_00293 1.7e-134 recO L Involved in DNA repair and RecF pathway recombination
PDDOOAAC_00294 3.9e-178 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PDDOOAAC_00295 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PDDOOAAC_00296 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PDDOOAAC_00297 1.2e-197 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PDDOOAAC_00298 1.4e-124 S Peptidase family M23
PDDOOAAC_00299 2.3e-67 mutT 3.6.1.55 F NUDIX domain
PDDOOAAC_00300 1.2e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
PDDOOAAC_00301 1e-153 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PDDOOAAC_00302 1.8e-242 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PDDOOAAC_00303 1.5e-59 yvoA_1 K Transcriptional regulator, GntR family
PDDOOAAC_00304 3.4e-121 skfE V ATPases associated with a variety of cellular activities
PDDOOAAC_00305 3.8e-143
PDDOOAAC_00306 3.8e-140
PDDOOAAC_00307 1.2e-112
PDDOOAAC_00308 1.3e-246 rarA L recombination factor protein RarA
PDDOOAAC_00309 7.8e-28
PDDOOAAC_00310 1e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PDDOOAAC_00311 4.3e-138
PDDOOAAC_00312 4.4e-175
PDDOOAAC_00313 1.8e-259 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
PDDOOAAC_00314 2.6e-183 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PDDOOAAC_00315 4.2e-203 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PDDOOAAC_00316 2.4e-178 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PDDOOAAC_00317 9.9e-166 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
PDDOOAAC_00318 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PDDOOAAC_00319 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PDDOOAAC_00320 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PDDOOAAC_00321 1.6e-88 ypmB S Protein conserved in bacteria
PDDOOAAC_00322 1.5e-260 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PDDOOAAC_00323 7.4e-115 dnaD L DnaD domain protein
PDDOOAAC_00324 2.5e-112 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PDDOOAAC_00325 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PDDOOAAC_00326 1.3e-116 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PDDOOAAC_00327 2.3e-104 ypsA S Belongs to the UPF0398 family
PDDOOAAC_00328 5.2e-69 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PDDOOAAC_00329 6.9e-217 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PDDOOAAC_00330 1.2e-230 cpdA S Calcineurin-like phosphoesterase
PDDOOAAC_00331 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PDDOOAAC_00332 2.8e-79 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PDDOOAAC_00333 1.3e-152 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PDDOOAAC_00334 1.9e-197 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PDDOOAAC_00335 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
PDDOOAAC_00336 0.0 FbpA K Fibronectin-binding protein
PDDOOAAC_00337 3.8e-64
PDDOOAAC_00338 1.9e-158 degV S EDD domain protein, DegV family
PDDOOAAC_00339 1.7e-204 xerS L Belongs to the 'phage' integrase family
PDDOOAAC_00340 5.3e-67
PDDOOAAC_00341 5.6e-26 adk 2.7.4.3 F topology modulation protein
PDDOOAAC_00342 9.4e-68 XK27_00160 S Domain of unknown function (DUF5052)
PDDOOAAC_00343 6.9e-17 XK27_00160 S Domain of unknown function (DUF5052)
PDDOOAAC_00344 2.4e-27 M Glycosyl hydrolases family 25
PDDOOAAC_00345 4.2e-78 M Glycosyl hydrolases family 25
PDDOOAAC_00346 1.2e-33 M Glycosyl hydrolases family 25
PDDOOAAC_00347 6.7e-57 yoaK S Protein of unknown function (DUF1275)
PDDOOAAC_00348 6.8e-54 K Helix-turn-helix domain
PDDOOAAC_00349 5.9e-111 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PDDOOAAC_00350 2.8e-163 ppaC 3.6.1.1 C inorganic pyrophosphatase
PDDOOAAC_00351 1.5e-167 K Transcriptional regulator
PDDOOAAC_00352 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PDDOOAAC_00353 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PDDOOAAC_00354 4.7e-106 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PDDOOAAC_00355 7.3e-202 snf 2.7.11.1 KL domain protein
PDDOOAAC_00356 8.8e-158 snf 2.7.11.1 KL domain protein
PDDOOAAC_00357 4.9e-50 snf 2.7.11.1 KL domain protein
PDDOOAAC_00358 2.5e-11 snf 2.7.11.1 KL domain protein
PDDOOAAC_00359 1.1e-52 XK27_08635 S UPF0210 protein
PDDOOAAC_00360 6.7e-68 XK27_08635 S UPF0210 protein
PDDOOAAC_00361 2.2e-28 1.1.1.3 T phosphoserine phosphatase activity
PDDOOAAC_00362 1.2e-137 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PDDOOAAC_00363 1.4e-55 I carboxylic ester hydrolase activity
PDDOOAAC_00364 3.7e-19 I carboxylic ester hydrolase activity
PDDOOAAC_00365 1.1e-66 yqiG C Oxidoreductase
PDDOOAAC_00366 7.3e-50 yqiG C Oxidoreductase
PDDOOAAC_00367 6.9e-43 yqiG C Oxidoreductase
PDDOOAAC_00368 1.4e-49 K HxlR-like helix-turn-helix
PDDOOAAC_00369 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PDDOOAAC_00370 1.2e-185 V Beta-lactamase
PDDOOAAC_00371 1.7e-273 pepV 3.5.1.18 E dipeptidase PepV
PDDOOAAC_00372 3.7e-54 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
PDDOOAAC_00373 2e-28 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
PDDOOAAC_00376 6.7e-187 tdh 1.1.1.14 C Zinc-binding dehydrogenase
PDDOOAAC_00377 3e-37
PDDOOAAC_00378 1.7e-99 S LexA-binding, inner membrane-associated putative hydrolase
PDDOOAAC_00379 5.3e-23
PDDOOAAC_00380 1.5e-92 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PDDOOAAC_00381 9e-14 S C4-dicarboxylate anaerobic carrier
PDDOOAAC_00382 5e-43 L transposase, IS605 OrfB family
PDDOOAAC_00383 3.5e-113 pbpX2 V Beta-lactamase
PDDOOAAC_00384 6.7e-104 3.2.2.20 K acetyltransferase
PDDOOAAC_00385 5.3e-95
PDDOOAAC_00386 3.7e-32
PDDOOAAC_00387 1.7e-267 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
PDDOOAAC_00388 3.2e-133 glvR K Helix-turn-helix domain, rpiR family
PDDOOAAC_00389 1.6e-185 ansA 3.5.1.1 EJ L-asparaginase, type I
PDDOOAAC_00390 5.4e-15
PDDOOAAC_00391 4.8e-125
PDDOOAAC_00392 3e-237 S response to antibiotic
PDDOOAAC_00393 1.1e-126 pgm3 G Phosphoglycerate mutase family
PDDOOAAC_00394 1.1e-119 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
PDDOOAAC_00395 0.0 helD 3.6.4.12 L DNA helicase
PDDOOAAC_00396 1.1e-107 glnP P ABC transporter permease
PDDOOAAC_00397 1.5e-109 glnQ 3.6.3.21 E ABC transporter
PDDOOAAC_00398 3.4e-149 aatB ET ABC transporter substrate-binding protein
PDDOOAAC_00399 3.2e-77 yjcF S Acetyltransferase (GNAT) domain
PDDOOAAC_00400 1.6e-102 E GDSL-like Lipase/Acylhydrolase
PDDOOAAC_00401 3.9e-170 coaA 2.7.1.33 F Pantothenic acid kinase
PDDOOAAC_00402 1.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PDDOOAAC_00403 4.1e-67 yybA 2.3.1.57 K Transcriptional regulator
PDDOOAAC_00404 8.4e-85 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
PDDOOAAC_00405 2.3e-65 S Peptidase propeptide and YPEB domain
PDDOOAAC_00406 1.3e-95 F Nucleoside 2-deoxyribosyltransferase
PDDOOAAC_00407 9.5e-186 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PDDOOAAC_00408 7.9e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
PDDOOAAC_00409 6.7e-274 V ABC transporter transmembrane region
PDDOOAAC_00410 1.2e-108 S PAS domain
PDDOOAAC_00411 1.1e-10
PDDOOAAC_00412 4.9e-139 pnuC H nicotinamide mononucleotide transporter
PDDOOAAC_00413 2.7e-17 S Protein of unknown function (DUF3290)
PDDOOAAC_00414 6.8e-41 S Protein of unknown function (DUF3290)
PDDOOAAC_00415 1.6e-106 yviA S Protein of unknown function (DUF421)
PDDOOAAC_00416 6.9e-158 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PDDOOAAC_00417 8.3e-163 dnaQ 2.7.7.7 L EXOIII
PDDOOAAC_00418 4.1e-153 endA F DNA RNA non-specific endonuclease
PDDOOAAC_00419 5.5e-280 pipD E Dipeptidase
PDDOOAAC_00420 1.3e-201 malK P ATPases associated with a variety of cellular activities
PDDOOAAC_00421 1.9e-158 gtsB P ABC-type sugar transport systems, permease components
PDDOOAAC_00422 2.3e-145 gtsC P Binding-protein-dependent transport system inner membrane component
PDDOOAAC_00423 1.1e-253 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
PDDOOAAC_00424 1.4e-234 G Bacterial extracellular solute-binding protein
PDDOOAAC_00425 6.5e-157 corA P CorA-like Mg2+ transporter protein
PDDOOAAC_00426 1.4e-154 3.5.2.6 V Beta-lactamase enzyme family
PDDOOAAC_00427 6.2e-97 yobS K Bacterial regulatory proteins, tetR family
PDDOOAAC_00428 0.0 ydgH S MMPL family
PDDOOAAC_00429 2.4e-152
PDDOOAAC_00430 1.5e-261 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
PDDOOAAC_00431 4.3e-124 hipB K Helix-turn-helix
PDDOOAAC_00432 7.2e-152 I alpha/beta hydrolase fold
PDDOOAAC_00433 1.3e-108 yjbF S SNARE associated Golgi protein
PDDOOAAC_00434 9.2e-98 J Acetyltransferase (GNAT) domain
PDDOOAAC_00435 5.3e-245 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PDDOOAAC_00436 2.5e-234 mepA V MATE efflux family protein
PDDOOAAC_00437 4.7e-254 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PDDOOAAC_00438 9.4e-33
PDDOOAAC_00439 7e-17 fic D Fic/DOC family
PDDOOAAC_00440 3.1e-57 fic D Fic/DOC family
PDDOOAAC_00441 9.7e-61
PDDOOAAC_00442 5.6e-289 P ABC transporter
PDDOOAAC_00443 6.3e-293 V ABC-type multidrug transport system, ATPase and permease components
PDDOOAAC_00444 2.5e-66 S Putative adhesin
PDDOOAAC_00445 1.3e-58 ypaA S Protein of unknown function (DUF1304)
PDDOOAAC_00446 3.3e-87
PDDOOAAC_00447 2e-55
PDDOOAAC_00448 8.6e-60 S Fic/DOC family
PDDOOAAC_00449 2.2e-50 S Fic/DOC family
PDDOOAAC_00450 5.5e-101
PDDOOAAC_00451 9e-181 EGP Major facilitator Superfamily
PDDOOAAC_00452 6e-134
PDDOOAAC_00453 6.6e-46
PDDOOAAC_00454 2.2e-35 K Acetyltransferase (GNAT) domain
PDDOOAAC_00456 2.5e-30 cdd 2.4.2.4, 3.5.4.5 F Cytidine and deoxycytidylate deaminase zinc-binding region
PDDOOAAC_00457 3.9e-30 cdd 2.4.2.4, 3.5.4.5 F Cytidine and deoxycytidylate deaminase zinc-binding region
PDDOOAAC_00458 5.3e-144 2.4.2.3 F Phosphorylase superfamily
PDDOOAAC_00459 5e-47
PDDOOAAC_00460 1.4e-62
PDDOOAAC_00461 1.2e-53 S Domain of unknown function (DUF5067)
PDDOOAAC_00462 7e-46
PDDOOAAC_00463 6e-28 L COG2963 Transposase and inactivated derivatives
PDDOOAAC_00464 2.9e-94 L transposase activity
PDDOOAAC_00465 3.5e-12 mta K helix_turn_helix, mercury resistance
PDDOOAAC_00466 2e-61 mta K helix_turn_helix, mercury resistance
PDDOOAAC_00467 6.5e-16 mta K helix_turn_helix, mercury resistance
PDDOOAAC_00468 9.8e-94 yyaR K Acetyltransferase (GNAT) domain
PDDOOAAC_00469 0.0 uvrA3 L excinuclease ABC, A subunit
PDDOOAAC_00472 1.9e-59 rdgB 3.6.1.66, 5.1.1.3 F Ham1 family
PDDOOAAC_00473 7.6e-223 mepA V MATE efflux family protein
PDDOOAAC_00474 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
PDDOOAAC_00475 3.9e-34 copZ C Heavy-metal-associated domain
PDDOOAAC_00476 9.8e-72 dps P Belongs to the Dps family
PDDOOAAC_00477 3.2e-59 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
PDDOOAAC_00478 1.9e-33 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
PDDOOAAC_00479 1.4e-87 K Acetyltransferase (GNAT) family
PDDOOAAC_00480 8.9e-140 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
PDDOOAAC_00481 8.8e-229 yrvN L AAA C-terminal domain
PDDOOAAC_00482 2.4e-31
PDDOOAAC_00483 1.2e-70 fabK 1.3.1.9 S Nitronate monooxygenase
PDDOOAAC_00484 4.5e-84 kptA H Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase
PDDOOAAC_00485 9.4e-65 S Abi-like protein
PDDOOAAC_00487 2.9e-72 4.1.1.45 S Amidohydrolase
PDDOOAAC_00488 2.2e-67 4.1.1.45 S Amidohydrolase
PDDOOAAC_00489 4.8e-76 lacA 2.3.1.79 S Maltose acetyltransferase
PDDOOAAC_00490 2.2e-108 G Antibiotic biosynthesis monooxygenase
PDDOOAAC_00491 2.8e-27 S Uncharacterized protein conserved in bacteria (DUF2255)
PDDOOAAC_00492 1.3e-69 adhR K helix_turn_helix, mercury resistance
PDDOOAAC_00493 3.9e-111 papP P ABC transporter, permease protein
PDDOOAAC_00494 3.1e-87 P ABC transporter permease
PDDOOAAC_00495 1.6e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDDOOAAC_00496 2.2e-159 cjaA ET ABC transporter substrate-binding protein
PDDOOAAC_00500 4.2e-55 doc S Fic/DOC family
PDDOOAAC_00501 1.3e-235 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PDDOOAAC_00502 1.4e-49 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
PDDOOAAC_00503 6e-105 pncA Q Isochorismatase family
PDDOOAAC_00504 2.9e-268 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDDOOAAC_00505 4.6e-126 3.6.1.13, 3.6.1.55 F NUDIX domain
PDDOOAAC_00507 5.6e-71 S Iron-sulphur cluster biosynthesis
PDDOOAAC_00508 1.1e-30 L COG2963 Transposase and inactivated derivatives
PDDOOAAC_00509 1.8e-46 L COG2963 Transposase and inactivated derivatives
PDDOOAAC_00510 1.2e-168 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PDDOOAAC_00512 6.5e-53
PDDOOAAC_00513 2.2e-237 I Protein of unknown function (DUF2974)
PDDOOAAC_00514 3.7e-120 yhiD S MgtC family
PDDOOAAC_00516 1.6e-30
PDDOOAAC_00519 1.5e-29 WQ51_00220 K Helix-turn-helix XRE-family like proteins
PDDOOAAC_00520 6.6e-73 ybbL S ABC transporter, ATP-binding protein
PDDOOAAC_00521 4.3e-130 ybbM S Uncharacterised protein family (UPF0014)
PDDOOAAC_00522 4.2e-53 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PDDOOAAC_00523 4.6e-231 S LPXTG cell wall anchor motif
PDDOOAAC_00524 2.3e-147 S Putative ABC-transporter type IV
PDDOOAAC_00525 2.5e-98 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S cob(I)alamin adenosyltransferase
PDDOOAAC_00526 6.5e-85 S ECF transporter, substrate-specific component
PDDOOAAC_00527 3e-58 S Domain of unknown function (DUF4430)
PDDOOAAC_00528 0.0 rtpR 1.1.98.6, 1.17.4.1, 1.17.4.2 F ribonucleoside-triphosphate reductase activity
PDDOOAAC_00529 1.2e-175 K AI-2E family transporter
PDDOOAAC_00530 4.4e-103 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
PDDOOAAC_00531 1.3e-11
PDDOOAAC_00532 6.4e-44
PDDOOAAC_00533 4.8e-129 XK27_08845 S ABC transporter, ATP-binding protein
PDDOOAAC_00534 6.9e-119 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PDDOOAAC_00535 1.3e-171 ABC-SBP S ABC transporter
PDDOOAAC_00536 1.7e-133 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PDDOOAAC_00537 9.7e-163 yvgN C Aldo keto reductase
PDDOOAAC_00539 0.0 tetP J elongation factor G
PDDOOAAC_00540 1.6e-143 3.1.3.102, 3.1.3.104, 3.1.3.23 S haloacid dehalogenase-like hydrolase
PDDOOAAC_00541 4e-28
PDDOOAAC_00542 1.7e-190 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDDOOAAC_00543 1.2e-168 yniA G Phosphotransferase enzyme family
PDDOOAAC_00544 3.3e-160 xth 3.1.11.2 L exodeoxyribonuclease III
PDDOOAAC_00545 1.1e-262 E amino acid
PDDOOAAC_00546 0.0 L Helicase C-terminal domain protein
PDDOOAAC_00547 1.6e-193 pbpX1 V Beta-lactamase
PDDOOAAC_00548 6.7e-69 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PDDOOAAC_00549 2.8e-199 S C4-dicarboxylate anaerobic carrier
PDDOOAAC_00550 2.9e-35
PDDOOAAC_00551 6.7e-11 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
PDDOOAAC_00552 3.4e-241 N Uncharacterized conserved protein (DUF2075)
PDDOOAAC_00553 3.3e-59 pdxH S Pyridoxamine 5'-phosphate oxidase
PDDOOAAC_00554 1.9e-09 pepO 3.4.24.71 O Peptidase family M13
PDDOOAAC_00555 0.0 pepO 3.4.24.71 O Peptidase family M13
PDDOOAAC_00556 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
PDDOOAAC_00557 1.4e-101 L PFAM transposase, IS4 family protein
PDDOOAAC_00558 7.9e-24 L PFAM transposase, IS4 family protein
PDDOOAAC_00559 0.0
PDDOOAAC_00560 0.0 S PglZ domain
PDDOOAAC_00561 2.5e-208 2.1.1.72 V Eco57I restriction-modification methylase
PDDOOAAC_00562 4.8e-107 V Eco57I restriction-modification methylase
PDDOOAAC_00563 6.6e-216 FbpA 3.1.21.3, 3.2.1.170 GH38 K RNA-binding protein homologous to eukaryotic snRNP
PDDOOAAC_00564 2.3e-110 S Domain of unknown function (DUF1788)
PDDOOAAC_00565 2.2e-105 S Putative inner membrane protein (DUF1819)
PDDOOAAC_00566 1.8e-236 S Protein of unknown function DUF262
PDDOOAAC_00567 2.1e-151
PDDOOAAC_00568 9.9e-74 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
PDDOOAAC_00569 6e-44 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
PDDOOAAC_00570 8e-31
PDDOOAAC_00571 3.4e-115 metQ2 P Belongs to the nlpA lipoprotein family
PDDOOAAC_00572 3e-19
PDDOOAAC_00573 1.6e-42 4.4.1.5 E lactoylglutathione lyase activity
PDDOOAAC_00574 1.8e-65 S ASCH domain
PDDOOAAC_00575 2.4e-109 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PDDOOAAC_00576 4.7e-81
PDDOOAAC_00577 2e-302
PDDOOAAC_00579 7.7e-41 K LysR substrate binding domain
PDDOOAAC_00580 3.5e-60 K LysR substrate binding domain
PDDOOAAC_00581 2.5e-107 K Transcriptional regulator, LysR family
PDDOOAAC_00582 2.5e-166 arbZ I Phosphate acyltransferases
PDDOOAAC_00583 2.9e-160 arbY M Glycosyl transferase family 8
PDDOOAAC_00584 1.1e-183 arbY M Glycosyl transferase family 8
PDDOOAAC_00585 1.9e-142 arbx M Glycosyl transferase family 8
PDDOOAAC_00586 5.3e-128 arbV 2.3.1.51 I Acyl-transferase
PDDOOAAC_00587 1.2e-29 L transposase, IS605 OrfB family
PDDOOAAC_00588 1.9e-119
PDDOOAAC_00590 1.1e-33
PDDOOAAC_00592 2.8e-131 K response regulator
PDDOOAAC_00593 2e-306 vicK 2.7.13.3 T Histidine kinase
PDDOOAAC_00594 9.7e-242 yycH S YycH protein
PDDOOAAC_00595 2.2e-148 yycI S YycH protein
PDDOOAAC_00596 6.3e-148 vicX 3.1.26.11 S domain protein
PDDOOAAC_00597 6.3e-179 htrA 3.4.21.107 O serine protease
PDDOOAAC_00598 4.3e-91 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PDDOOAAC_00599 1.3e-106 K Helix-turn-helix XRE-family like proteins
PDDOOAAC_00600 4.6e-100 S Bacteriocin helveticin-J
PDDOOAAC_00601 4.2e-78 S SLAP domain
PDDOOAAC_00602 1.5e-171 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
PDDOOAAC_00603 3.7e-90 P Cobalt transport protein
PDDOOAAC_00604 5.5e-245 cbiO1 S ABC transporter, ATP-binding protein
PDDOOAAC_00605 4.3e-172 K helix_turn_helix, arabinose operon control protein
PDDOOAAC_00606 5.6e-161 htpX O Belongs to the peptidase M48B family
PDDOOAAC_00607 2.3e-96 lemA S LemA family
PDDOOAAC_00608 8.3e-191 ybiR P Citrate transporter
PDDOOAAC_00609 2.9e-69 S Iron-sulphur cluster biosynthesis
PDDOOAAC_00610 3.1e-20 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
PDDOOAAC_00611 3e-248 ade 3.5.4.2 F Adenine deaminase C-terminal domain
PDDOOAAC_00612 2.6e-141 potD2 P ABC transporter
PDDOOAAC_00613 3.3e-133 potA11 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PDDOOAAC_00614 3e-105 potC3 E Binding-protein-dependent transport system inner membrane component
PDDOOAAC_00615 4.2e-102 potB E Binding-protein-dependent transport system inner membrane component
PDDOOAAC_00616 2.3e-51 lctP C L-lactate permease
PDDOOAAC_00617 5.9e-51 lctP C L-lactate permease
PDDOOAAC_00618 8.9e-33 lctP C L-lactate permease
PDDOOAAC_00619 1e-41 S Enterocin A Immunity
PDDOOAAC_00620 4.8e-51 Z012_06740 S Fic/DOC family
PDDOOAAC_00621 0.0 pepF E oligoendopeptidase F
PDDOOAAC_00622 8.1e-211 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PDDOOAAC_00623 1.9e-13 S Protein of unknown function (DUF554)
PDDOOAAC_00624 2e-89 S Protein of unknown function (DUF554)
PDDOOAAC_00625 1.4e-98 rimL J Acetyltransferase (GNAT) domain
PDDOOAAC_00626 1e-55
PDDOOAAC_00627 1.9e-289 S ABC transporter
PDDOOAAC_00628 4.4e-138 thrE S Putative threonine/serine exporter
PDDOOAAC_00629 8.4e-79 S Threonine/Serine exporter, ThrE
PDDOOAAC_00630 0.0 kup P Transport of potassium into the cell
PDDOOAAC_00631 3.7e-85
PDDOOAAC_00634 7e-17
PDDOOAAC_00635 2e-37 S Protein of unknown function (DUF2922)
PDDOOAAC_00636 2.2e-169 S SLAP domain
PDDOOAAC_00637 4.5e-198 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PDDOOAAC_00638 7.6e-205 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
PDDOOAAC_00639 0.0 yjbQ P TrkA C-terminal domain protein
PDDOOAAC_00640 1.1e-15 ps301 K Protein of unknown function (DUF4065)
PDDOOAAC_00641 2.3e-71 gepA K Protein of unknown function (DUF4065)
PDDOOAAC_00643 1.1e-77 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PDDOOAAC_00644 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PDDOOAAC_00645 2.3e-29 secG U Preprotein translocase
PDDOOAAC_00646 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PDDOOAAC_00647 4.9e-177 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PDDOOAAC_00648 1.3e-201 cpoA GT4 M Glycosyltransferase, group 1 family protein
PDDOOAAC_00649 2e-219 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
PDDOOAAC_00677 2.6e-55 vsr L DNA mismatch endonuclease Vsr
PDDOOAAC_00679 1.7e-44 repA S Replication initiator protein A
PDDOOAAC_00680 5.3e-25
PDDOOAAC_00681 5.4e-24 S Protein of unknown function (DUF2922)
PDDOOAAC_00682 1.7e-111 L Phage integrase, N-terminal SAM-like domain
PDDOOAAC_00683 3.5e-44 L Single-strand binding protein family
PDDOOAAC_00684 2e-138 L Replication initiation factor
PDDOOAAC_00685 6.5e-94 S Lysin motif
PDDOOAAC_00687 2e-106 S NgoFVII restriction endonuclease
PDDOOAAC_00688 9.1e-159 dcm 2.1.1.37 H C-5 cytosine-specific DNA methylase
PDDOOAAC_00689 5.4e-55 L transposase, IS605 OrfB family
PDDOOAAC_00690 1.7e-131 yvpB S Peptidase_C39 like family
PDDOOAAC_00691 1e-66
PDDOOAAC_00692 6.3e-95
PDDOOAAC_00693 1.9e-275 S O-antigen ligase like membrane protein
PDDOOAAC_00694 3.7e-24
PDDOOAAC_00695 1.2e-94 gmk2 2.7.4.8 F Guanylate kinase homologues.
PDDOOAAC_00696 2.2e-91 M NlpC/P60 family
PDDOOAAC_00697 3e-126 M NlpC P60 family protein
PDDOOAAC_00698 7.9e-137 M NlpC/P60 family
PDDOOAAC_00700 1e-63 L Transposase
PDDOOAAC_00701 6.7e-23
PDDOOAAC_00702 9.4e-211 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
PDDOOAAC_00703 2.4e-66 2.4.1.83 GT2 S GtrA-like protein
PDDOOAAC_00704 8.9e-170 yfdH GT2 M Glycosyltransferase like family 2
PDDOOAAC_00705 1e-57 S Bacterial membrane protein, YfhO
PDDOOAAC_00706 1e-85 S Bacterial membrane protein, YfhO
PDDOOAAC_00707 1.4e-93 S Bacterial membrane protein, YfhO
PDDOOAAC_00708 1e-101
PDDOOAAC_00709 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PDDOOAAC_00710 4e-237 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PDDOOAAC_00711 2.2e-125 S Haloacid dehalogenase-like hydrolase
PDDOOAAC_00712 3e-113 radC L DNA repair protein
PDDOOAAC_00713 1.6e-172 mreB D cell shape determining protein MreB
PDDOOAAC_00714 4.3e-147 mreC M Involved in formation and maintenance of cell shape
PDDOOAAC_00715 4.9e-96 mreD
PDDOOAAC_00716 2.5e-12 S Protein of unknown function (DUF4044)
PDDOOAAC_00717 1.9e-53 S Protein of unknown function (DUF3397)
PDDOOAAC_00718 1.7e-84 L COG2826 Transposase and inactivated derivatives, IS30 family
PDDOOAAC_00719 1.2e-17 L Transposase and inactivated derivatives IS30 family
PDDOOAAC_00720 3.1e-69 L COG2826 Transposase and inactivated derivatives, IS30 family
PDDOOAAC_00721 1.8e-77 mraZ K Belongs to the MraZ family
PDDOOAAC_00722 3.4e-183 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PDDOOAAC_00723 9.1e-54 ftsL D Cell division protein FtsL
PDDOOAAC_00724 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PDDOOAAC_00725 2.3e-176 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PDDOOAAC_00726 2.8e-260 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PDDOOAAC_00727 2.2e-207 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PDDOOAAC_00728 9.8e-131 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PDDOOAAC_00729 5.7e-234 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PDDOOAAC_00730 1.6e-204 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PDDOOAAC_00731 4.8e-73 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PDDOOAAC_00732 9e-47 yggT S YGGT family
PDDOOAAC_00733 8.2e-148 ylmH S S4 domain protein
PDDOOAAC_00734 6.1e-95 gpsB D DivIVA domain protein
PDDOOAAC_00735 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PDDOOAAC_00736 2.1e-31 cspA K 'Cold-shock' DNA-binding domain
PDDOOAAC_00737 6.3e-102 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PDDOOAAC_00738 4.6e-38
PDDOOAAC_00739 3.8e-125 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PDDOOAAC_00740 3e-215 iscS 2.8.1.7 E Aminotransferase class V
PDDOOAAC_00741 1.4e-56 XK27_04120 S Putative amino acid metabolism
PDDOOAAC_00742 2.7e-221 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PDDOOAAC_00743 1.2e-123 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PDDOOAAC_00744 3e-100 S Repeat protein
PDDOOAAC_00745 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PDDOOAAC_00746 4.8e-108 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PDDOOAAC_00747 2.1e-29 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PDDOOAAC_00748 2.3e-193 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PDDOOAAC_00749 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDDOOAAC_00750 1.2e-32 ykzG S Belongs to the UPF0356 family
PDDOOAAC_00751 1.5e-100 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PDDOOAAC_00752 0.0 typA T GTP-binding protein TypA
PDDOOAAC_00753 1.4e-207 ftsW D Belongs to the SEDS family
PDDOOAAC_00754 4.3e-53 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
PDDOOAAC_00755 1.9e-95 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PDDOOAAC_00756 2.7e-85 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PDDOOAAC_00757 6.4e-193 ylbL T Belongs to the peptidase S16 family
PDDOOAAC_00758 7.3e-84 comEA L Competence protein ComEA
PDDOOAAC_00759 0.0 comEC S Competence protein ComEC
PDDOOAAC_00760 2.2e-171 holA 2.7.7.7 L DNA polymerase III delta subunit
PDDOOAAC_00761 1.5e-34 rpsT J Binds directly to 16S ribosomal RNA
PDDOOAAC_00762 7e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PDDOOAAC_00763 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDDOOAAC_00764 5.4e-150
PDDOOAAC_00765 4.7e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PDDOOAAC_00766 1.3e-209 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PDDOOAAC_00767 1.4e-234 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PDDOOAAC_00768 6.4e-105 engB D Necessary for normal cell division and for the maintenance of normal septation
PDDOOAAC_00769 2.4e-273 yjeM E Amino Acid
PDDOOAAC_00770 3.5e-188 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PDDOOAAC_00771 1.6e-260 lysC 2.7.2.4 E Belongs to the aspartokinase family
PDDOOAAC_00772 3e-248 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PDDOOAAC_00773 3.6e-78 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PDDOOAAC_00774 4e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PDDOOAAC_00775 7.8e-174 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PDDOOAAC_00776 2.1e-140 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PDDOOAAC_00777 2e-214 aspC 2.6.1.1 E Aminotransferase
PDDOOAAC_00778 2.3e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PDDOOAAC_00779 1.5e-203 pbpX1 V Beta-lactamase
PDDOOAAC_00780 1.5e-55 3.6.1.55 F NUDIX domain
PDDOOAAC_00781 8.4e-301 I Protein of unknown function (DUF2974)
PDDOOAAC_00782 3.2e-28 C FMN_bind
PDDOOAAC_00783 4e-79
PDDOOAAC_00784 7e-175 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
PDDOOAAC_00785 6.3e-168 S Aldo keto reductase
PDDOOAAC_00786 2.5e-288 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDDOOAAC_00787 4.4e-115 K UTRA domain
PDDOOAAC_00788 1.9e-53 celA1 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PDDOOAAC_00789 4.7e-58 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
PDDOOAAC_00790 4e-79
PDDOOAAC_00791 2.8e-241 celD G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDDOOAAC_00792 1.2e-15 gepA K Protein of unknown function (DUF4065)
PDDOOAAC_00793 6.7e-69 S Domain of unknown function (DUF3284)
PDDOOAAC_00794 3.2e-299 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDDOOAAC_00795 1.1e-122 gmuR K UTRA
PDDOOAAC_00796 1.2e-38
PDDOOAAC_00797 3.7e-260 lacE G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDDOOAAC_00798 1.9e-277 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDDOOAAC_00799 6.1e-149 ypbG 2.7.1.2 GK ROK family
PDDOOAAC_00800 2.1e-85 C nitroreductase
PDDOOAAC_00801 8.6e-65 S Domain of unknown function (DUF4767)
PDDOOAAC_00802 6.2e-246 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PDDOOAAC_00803 6.6e-132 yitS S Uncharacterised protein, DegV family COG1307
PDDOOAAC_00804 7.2e-98 3.6.1.27 I Acid phosphatase homologues
PDDOOAAC_00805 2.2e-82 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PDDOOAAC_00806 1e-58 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PDDOOAAC_00808 5.4e-248 yifK E Amino acid permease
PDDOOAAC_00809 7e-186 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PDDOOAAC_00810 4.4e-94 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PDDOOAAC_00811 2.1e-15 ps301 K sequence-specific DNA binding
PDDOOAAC_00812 0.0 aha1 P E1-E2 ATPase
PDDOOAAC_00813 8.2e-162 metQ1 P Belongs to the nlpA lipoprotein family
PDDOOAAC_00814 3.4e-189 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PDDOOAAC_00815 6.4e-88 metI P ABC transporter permease
PDDOOAAC_00816 1.7e-34
PDDOOAAC_00817 2e-266 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PDDOOAAC_00818 1.1e-253 frdC 1.3.5.4 C FAD binding domain
PDDOOAAC_00819 2e-161 L Transposase
PDDOOAAC_00820 2e-233 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PDDOOAAC_00822 9.7e-43 M domain protein
PDDOOAAC_00823 1.1e-07 UW LPXTG-motif cell wall anchor domain protein
PDDOOAAC_00824 3.5e-166 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PDDOOAAC_00825 1.3e-11 fhaB M Rib/alpha-like repeat
PDDOOAAC_00826 6.1e-80
PDDOOAAC_00827 2.7e-257 pepC 3.4.22.40 E Peptidase C1-like family
PDDOOAAC_00828 4.1e-37 P Sodium:sulfate symporter transmembrane region
PDDOOAAC_00829 4.2e-152 ydjP I Alpha/beta hydrolase family
PDDOOAAC_00830 1.7e-193 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PDDOOAAC_00831 1.2e-43 citD C Covalent carrier of the coenzyme of citrate lyase
PDDOOAAC_00832 8.2e-168 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
PDDOOAAC_00833 1.8e-88 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
PDDOOAAC_00834 7.9e-67 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
PDDOOAAC_00835 1.9e-98 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
PDDOOAAC_00836 2.8e-91
PDDOOAAC_00837 2.9e-77 M1-431 S Protein of unknown function (DUF1706)
PDDOOAAC_00838 1.3e-87 L Transposase
PDDOOAAC_00839 2.3e-119 L Transposase
PDDOOAAC_00840 7.9e-71 yeaL S Protein of unknown function (DUF441)
PDDOOAAC_00841 9e-14
PDDOOAAC_00842 6.8e-128 cbiQ P cobalt transport
PDDOOAAC_00843 0.0 ykoD P ABC transporter, ATP-binding protein
PDDOOAAC_00844 1.3e-94 S UPF0397 protein
PDDOOAAC_00845 1.4e-65 S Domain of unknown function DUF1828
PDDOOAAC_00846 4.2e-53
PDDOOAAC_00847 1.3e-168 citR K Putative sugar-binding domain
PDDOOAAC_00848 4.3e-242 yjjP S Putative threonine/serine exporter
PDDOOAAC_00849 1.8e-95 yxkA S Phosphatidylethanolamine-binding protein
PDDOOAAC_00850 6.4e-26
PDDOOAAC_00852 2.3e-29 M domain protein
PDDOOAAC_00853 5.7e-86 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PDDOOAAC_00854 7.2e-175 prmA J Ribosomal protein L11 methyltransferase
PDDOOAAC_00855 1.5e-59
PDDOOAAC_00856 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PDDOOAAC_00857 3.3e-74 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PDDOOAAC_00858 1.1e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
PDDOOAAC_00859 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PDDOOAAC_00860 6.3e-221 patA 2.6.1.1 E Aminotransferase
PDDOOAAC_00861 7.3e-217 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PDDOOAAC_00862 1.4e-19 S reductase
PDDOOAAC_00863 6.8e-110 S reductase
PDDOOAAC_00864 2.4e-139 yxeH S hydrolase
PDDOOAAC_00865 7.8e-16 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDDOOAAC_00866 3.1e-31 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDDOOAAC_00867 1.6e-89 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDDOOAAC_00868 6.6e-246 yfnA E Amino Acid
PDDOOAAC_00869 1.9e-44 dedA 3.1.3.1 S SNARE associated Golgi protein
PDDOOAAC_00870 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PDDOOAAC_00871 3.6e-241 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PDDOOAAC_00872 0.0 oatA I Acyltransferase
PDDOOAAC_00873 2.9e-176 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PDDOOAAC_00874 6.1e-143 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PDDOOAAC_00875 6.2e-33 yrvD S Lipopolysaccharide assembly protein A domain
PDDOOAAC_00876 7.6e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PDDOOAAC_00877 1.7e-303 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PDDOOAAC_00878 2.5e-22 S Protein of unknown function (DUF2929)
PDDOOAAC_00879 0.0 dnaE 2.7.7.7 L DNA polymerase
PDDOOAAC_00880 6.6e-184 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PDDOOAAC_00881 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PDDOOAAC_00882 1.8e-162 cvfB S S1 domain
PDDOOAAC_00883 4e-167 xerD D recombinase XerD
PDDOOAAC_00884 1.2e-58 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PDDOOAAC_00885 2.5e-130 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PDDOOAAC_00886 2.7e-103 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PDDOOAAC_00887 1.3e-128 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PDDOOAAC_00888 1.3e-114 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PDDOOAAC_00889 2.4e-30 yocH M Lysin motif
PDDOOAAC_00890 1.3e-114 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PDDOOAAC_00891 1.7e-205 rpsA 1.17.7.4 J Ribosomal protein S1
PDDOOAAC_00892 1.1e-245 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PDDOOAAC_00893 3.9e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PDDOOAAC_00894 6.6e-229 S Tetratricopeptide repeat protein
PDDOOAAC_00895 5.7e-158 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PDDOOAAC_00896 2.3e-226 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PDDOOAAC_00897 4.4e-113 hlyIII S protein, hemolysin III
PDDOOAAC_00898 9.4e-147 DegV S Uncharacterised protein, DegV family COG1307
PDDOOAAC_00899 3.5e-35 yozE S Belongs to the UPF0346 family
PDDOOAAC_00900 1.4e-276 yjcE P Sodium proton antiporter
PDDOOAAC_00901 3.8e-159 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PDDOOAAC_00902 7e-133 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDDOOAAC_00903 3.4e-152 dprA LU DNA protecting protein DprA
PDDOOAAC_00904 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PDDOOAAC_00905 3.6e-249 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PDDOOAAC_00906 1.1e-167 xerC D Phage integrase, N-terminal SAM-like domain
PDDOOAAC_00907 1.9e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PDDOOAAC_00908 9.4e-232 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PDDOOAAC_00909 1.2e-174 lacX 5.1.3.3 G Aldose 1-epimerase
PDDOOAAC_00910 9.1e-23
PDDOOAAC_00911 7.9e-21 L PFAM IS66 Orf2 family protein
PDDOOAAC_00912 3.7e-26 S Transposase C of IS166 homeodomain
PDDOOAAC_00913 2.8e-134 L Transposase and inactivated derivatives
PDDOOAAC_00915 2.4e-56 L Putative transposase DNA-binding domain
PDDOOAAC_00916 5.5e-53 L Putative transposase DNA-binding domain
PDDOOAAC_00917 1.8e-98 EGP Major facilitator Superfamily
PDDOOAAC_00918 1.4e-50 Q AMP-binding enzyme
PDDOOAAC_00919 0.0 Q AMP-binding enzyme
PDDOOAAC_00922 8.8e-154 2.5.1.140 E Belongs to the cysteine synthase cystathionine beta- synthase family
PDDOOAAC_00923 5e-147 K Helix-turn-helix XRE-family like proteins
PDDOOAAC_00924 5.8e-73 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
PDDOOAAC_00925 1.8e-58 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PDDOOAAC_00926 1.4e-150 xerD L Phage integrase, N-terminal SAM-like domain
PDDOOAAC_00927 1.9e-65 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDDOOAAC_00928 2.9e-63 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDDOOAAC_00929 1.9e-48 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
PDDOOAAC_00930 2e-277 E Amino acid permease
PDDOOAAC_00931 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PDDOOAAC_00932 2.1e-246 ynbB 4.4.1.1 P aluminum resistance
PDDOOAAC_00933 5.4e-44 ktrA P domain protein
PDDOOAAC_00934 4.8e-55 ktrA P domain protein
PDDOOAAC_00935 3.1e-60 ktrB P Potassium uptake protein
PDDOOAAC_00936 7.6e-102 ktrB P Potassium uptake protein
PDDOOAAC_00937 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PDDOOAAC_00938 1.7e-78 C Flavodoxin
PDDOOAAC_00939 8.9e-113 3.6.1.27 I Acid phosphatase homologues
PDDOOAAC_00940 1.3e-105 lacA 2.3.1.79 S Transferase hexapeptide repeat
PDDOOAAC_00941 4.1e-206 pbpX1 V Beta-lactamase
PDDOOAAC_00942 7e-150 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PDDOOAAC_00943 8.4e-91 S ECF-type riboflavin transporter, S component
PDDOOAAC_00944 1.2e-230 S Putative peptidoglycan binding domain
PDDOOAAC_00945 1.5e-78
PDDOOAAC_00946 9.3e-83 S COG NOG38524 non supervised orthologous group
PDDOOAAC_00947 4.5e-149 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
PDDOOAAC_00948 3.7e-114 dedA S SNARE-like domain protein
PDDOOAAC_00949 2.1e-79 S Protein of unknown function (DUF1461)
PDDOOAAC_00950 2.9e-145 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PDDOOAAC_00951 2.7e-85 yutD S Protein of unknown function (DUF1027)
PDDOOAAC_00952 1.2e-276 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PDDOOAAC_00953 1.1e-55
PDDOOAAC_00954 2.4e-264 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PDDOOAAC_00955 6e-180 ccpA K catabolite control protein A
PDDOOAAC_00956 6.3e-215 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PDDOOAAC_00957 1e-44
PDDOOAAC_00958 2.1e-09 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PDDOOAAC_00959 2.7e-149 ykuT M mechanosensitive ion channel
PDDOOAAC_00960 2.7e-114 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PDDOOAAC_00961 2e-146 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PDDOOAAC_00962 2.5e-68 yslB S Protein of unknown function (DUF2507)
PDDOOAAC_00963 7.7e-40 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PDDOOAAC_00964 4.6e-54 trxA O Belongs to the thioredoxin family
PDDOOAAC_00965 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PDDOOAAC_00966 2.4e-50 yrzB S Belongs to the UPF0473 family
PDDOOAAC_00967 1e-72 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PDDOOAAC_00968 2e-42 yrzL S Belongs to the UPF0297 family
PDDOOAAC_00969 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PDDOOAAC_00970 1.4e-86
PDDOOAAC_00971 4.1e-70
PDDOOAAC_00972 5.2e-227 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PDDOOAAC_00973 1.2e-180 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PDDOOAAC_00974 5.6e-211 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PDDOOAAC_00975 1.4e-283 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PDDOOAAC_00976 2.2e-35 yajC U Preprotein translocase
PDDOOAAC_00977 2.8e-185 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PDDOOAAC_00978 3.5e-103 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PDDOOAAC_00979 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PDDOOAAC_00980 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PDDOOAAC_00981 3.3e-289 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PDDOOAAC_00982 3e-44 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PDDOOAAC_00983 1.3e-88
PDDOOAAC_00984 1.6e-45
PDDOOAAC_00985 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
PDDOOAAC_00986 2e-229 scrB 3.2.1.26 GH32 G invertase
PDDOOAAC_00987 9.1e-181 scrR K Transcriptional regulator, LacI family
PDDOOAAC_00988 6.5e-123 liaI S membrane
PDDOOAAC_00989 2.4e-75 XK27_02470 K LytTr DNA-binding domain
PDDOOAAC_00990 8.2e-114 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PDDOOAAC_00991 0.0 uup S ABC transporter, ATP-binding protein
PDDOOAAC_00993 2.2e-66 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
PDDOOAAC_00994 1.1e-83 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PDDOOAAC_00995 7.9e-199 yfdE 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PDDOOAAC_00996 1.4e-28 S Toxin ToxN, type III toxin-antitoxin system
PDDOOAAC_00997 3.2e-127 K UTRA
PDDOOAAC_00998 5.2e-181 S Oxidoreductase family, NAD-binding Rossmann fold
PDDOOAAC_00999 8.7e-125 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PDDOOAAC_01000 5.3e-195 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PDDOOAAC_01001 1.4e-101 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PDDOOAAC_01002 3.4e-132 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PDDOOAAC_01003 9.9e-86 S ECF transporter, substrate-specific component
PDDOOAAC_01004 1.3e-126 fat 3.1.2.21 I Acyl-ACP thioesterase
PDDOOAAC_01005 2.2e-154 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PDDOOAAC_01006 2.7e-58 yabA L Involved in initiation control of chromosome replication
PDDOOAAC_01007 2.4e-153 holB 2.7.7.7 L DNA polymerase III
PDDOOAAC_01008 1.4e-50 yaaQ S Cyclic-di-AMP receptor
PDDOOAAC_01009 3.3e-115 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PDDOOAAC_01010 4.5e-33 S Protein of unknown function (DUF2508)
PDDOOAAC_01011 2.1e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PDDOOAAC_01012 1.4e-37 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PDDOOAAC_01013 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDDOOAAC_01014 5e-90 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PDDOOAAC_01015 7.5e-112 rsmC 2.1.1.172 J Methyltransferase
PDDOOAAC_01016 1e-44 rsmC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
PDDOOAAC_01017 5e-29 rsmC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
PDDOOAAC_01018 5.4e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PDDOOAAC_01019 1e-82 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PDDOOAAC_01020 3.3e-119 yfdV S Membrane transport protein
PDDOOAAC_01021 1.1e-22 yfdV S Membrane transport protein
PDDOOAAC_01022 3.6e-26 yfdV S Membrane transport protein
PDDOOAAC_01023 2.9e-117 phoU P Plays a role in the regulation of phosphate uptake
PDDOOAAC_01024 3.9e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDDOOAAC_01025 1.1e-141 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDDOOAAC_01026 9.1e-156 pstA P Phosphate transport system permease protein PstA
PDDOOAAC_01027 7e-173 pstC P probably responsible for the translocation of the substrate across the membrane
PDDOOAAC_01028 9.5e-158 pstS P Phosphate
PDDOOAAC_01029 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PDDOOAAC_01030 3.4e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PDDOOAAC_01031 3.1e-101 nusG K Participates in transcription elongation, termination and antitermination
PDDOOAAC_01032 5.9e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PDDOOAAC_01033 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PDDOOAAC_01034 4.9e-279 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
PDDOOAAC_01035 8.3e-34
PDDOOAAC_01036 1.4e-93 sigH K Belongs to the sigma-70 factor family
PDDOOAAC_01037 7.8e-140 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDDOOAAC_01038 7.9e-76 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PDDOOAAC_01039 5.6e-272 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDDOOAAC_01040 3.4e-288 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PDDOOAAC_01041 1.7e-254 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PDDOOAAC_01042 2.8e-102 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
PDDOOAAC_01043 4.9e-53
PDDOOAAC_01044 1.3e-265 pepC 3.4.22.40 E Peptidase C1-like family
PDDOOAAC_01045 3.5e-46
PDDOOAAC_01046 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PDDOOAAC_01047 2.1e-182 S AAA domain
PDDOOAAC_01048 2.2e-125 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDDOOAAC_01049 5.5e-23
PDDOOAAC_01050 2.5e-161 czcD P cation diffusion facilitator family transporter
PDDOOAAC_01051 2e-126 pgm3 G Belongs to the phosphoglycerate mutase family
PDDOOAAC_01052 6.4e-134 S membrane transporter protein
PDDOOAAC_01053 3.9e-111 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PDDOOAAC_01054 2.3e-107 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
PDDOOAAC_01055 9.3e-62 S Protein of unknown function (DUF805)
PDDOOAAC_01056 1.6e-67 rpsI J Belongs to the universal ribosomal protein uS9 family
PDDOOAAC_01057 1.7e-78 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PDDOOAAC_01058 4.6e-143 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PDDOOAAC_01059 1.8e-139 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDDOOAAC_01060 1.5e-149 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDDOOAAC_01061 1.7e-151 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDDOOAAC_01062 1.1e-60 rplQ J Ribosomal protein L17
PDDOOAAC_01063 1.8e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDDOOAAC_01064 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PDDOOAAC_01065 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PDDOOAAC_01066 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PDDOOAAC_01067 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PDDOOAAC_01068 6e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PDDOOAAC_01069 6.9e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PDDOOAAC_01070 4.5e-71 rplO J Binds to the 23S rRNA
PDDOOAAC_01071 2.3e-24 rpmD J Ribosomal protein L30
PDDOOAAC_01072 1.8e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PDDOOAAC_01073 2.8e-55 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PDDOOAAC_01074 9.5e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PDDOOAAC_01075 7.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PDDOOAAC_01076 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDDOOAAC_01077 1.8e-93 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PDDOOAAC_01078 3.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PDDOOAAC_01079 3.9e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PDDOOAAC_01080 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PDDOOAAC_01081 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
PDDOOAAC_01082 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PDDOOAAC_01083 1.7e-109 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PDDOOAAC_01084 2.6e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PDDOOAAC_01085 3.5e-45 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PDDOOAAC_01086 1.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PDDOOAAC_01087 1.7e-45 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PDDOOAAC_01088 8.7e-105 rplD J Forms part of the polypeptide exit tunnel
PDDOOAAC_01089 6.9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PDDOOAAC_01090 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PDDOOAAC_01091 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PDDOOAAC_01092 6e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PDDOOAAC_01093 7.8e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PDDOOAAC_01094 2.1e-120 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
PDDOOAAC_01095 1.1e-30 L COG2963 Transposase and inactivated derivatives
PDDOOAAC_01096 9.6e-64 L COG2963 Transposase and inactivated derivatives
PDDOOAAC_01097 1e-80 L COG2963 Transposase and inactivated derivatives
PDDOOAAC_01098 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDDOOAAC_01099 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDDOOAAC_01100 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PDDOOAAC_01101 2.9e-81 yebR 1.8.4.14 T GAF domain-containing protein
PDDOOAAC_01103 1.6e-08
PDDOOAAC_01104 4.6e-77
PDDOOAAC_01106 6.4e-298 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PDDOOAAC_01107 2.1e-196 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PDDOOAAC_01108 1.9e-161 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PDDOOAAC_01109 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PDDOOAAC_01110 3.5e-238 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PDDOOAAC_01111 3.5e-61 yabR J S1 RNA binding domain
PDDOOAAC_01112 9.8e-59 divIC D Septum formation initiator
PDDOOAAC_01113 1.8e-34 yabO J S4 domain protein
PDDOOAAC_01114 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PDDOOAAC_01115 1.9e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PDDOOAAC_01116 2.1e-182 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PDDOOAAC_01117 1.4e-127 S (CBS) domain
PDDOOAAC_01118 4.6e-92 K transcriptional regulator
PDDOOAAC_01119 1.4e-214 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PDDOOAAC_01120 2.2e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PDDOOAAC_01121 1.8e-244 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PDDOOAAC_01122 2.5e-261 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PDDOOAAC_01123 1.5e-39 rpmE2 J Ribosomal protein L31
PDDOOAAC_01124 2.7e-154 S Sucrose-6F-phosphate phosphohydrolase
PDDOOAAC_01125 3.4e-278 ybeC E amino acid
PDDOOAAC_01126 6.2e-227 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PDDOOAAC_01127 2.9e-14 1.1.1.1 C nadph quinone reductase
PDDOOAAC_01128 1.3e-202 L transposase, IS605 OrfB family
PDDOOAAC_01130 4.3e-302 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PDDOOAAC_01131 1.3e-45 K Helix-turn-helix
PDDOOAAC_01132 1.1e-42 K DNA-binding helix-turn-helix protein
PDDOOAAC_01133 1e-53 K DNA-binding helix-turn-helix protein
PDDOOAAC_01134 2.2e-102 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PDDOOAAC_01135 1.6e-222 pbuX F xanthine permease
PDDOOAAC_01136 1.4e-158 msmR K AraC-like ligand binding domain
PDDOOAAC_01137 5.3e-283 pipD E Dipeptidase
PDDOOAAC_01138 4.4e-22 S Haloacid dehalogenase-like hydrolase
PDDOOAAC_01139 4.3e-40 S Haloacid dehalogenase-like hydrolase
PDDOOAAC_01140 8.1e-246 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDDOOAAC_01141 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PDDOOAAC_01142 2.6e-52 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PDDOOAAC_01143 4e-66 S Domain of unknown function (DUF1934)
PDDOOAAC_01144 4.8e-265 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
PDDOOAAC_01145 6.4e-21
PDDOOAAC_01146 9.4e-148 GK ROK family
PDDOOAAC_01147 3.9e-176 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDDOOAAC_01148 3.2e-220 S SLAP domain
PDDOOAAC_01149 2.1e-103 S SLAP domain
PDDOOAAC_01150 1.8e-195 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PDDOOAAC_01151 7.7e-149 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
PDDOOAAC_01152 2.6e-37 veg S Biofilm formation stimulator VEG
PDDOOAAC_01153 9.4e-161 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PDDOOAAC_01154 6.5e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PDDOOAAC_01155 2.3e-147 tatD L hydrolase, TatD family
PDDOOAAC_01156 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PDDOOAAC_01157 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PDDOOAAC_01158 1.5e-107 S TPM domain
PDDOOAAC_01159 1.6e-90 comEB 3.5.4.12 F MafB19-like deaminase
PDDOOAAC_01160 2.8e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDDOOAAC_01161 9.9e-114 E Belongs to the SOS response-associated peptidase family
PDDOOAAC_01163 4.9e-114
PDDOOAAC_01164 6.3e-76 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDDOOAAC_01165 7.6e-68 hsp O Belongs to the small heat shock protein (HSP20) family
PDDOOAAC_01166 1.1e-255 pepC 3.4.22.40 E aminopeptidase
PDDOOAAC_01167 9.1e-209 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PDDOOAAC_01168 1.8e-116 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PDDOOAAC_01169 2.9e-251 pepC 3.4.22.40 E aminopeptidase
PDDOOAAC_01171 2.2e-52
PDDOOAAC_01172 1.4e-242 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PDDOOAAC_01173 1.2e-258 S Fibronectin type III domain
PDDOOAAC_01174 0.0 XK27_08315 M Sulfatase
PDDOOAAC_01175 2.8e-111 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PDDOOAAC_01176 3.4e-200 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PDDOOAAC_01177 1.3e-99 G Aldose 1-epimerase
PDDOOAAC_01178 1.9e-109 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PDDOOAAC_01179 8.4e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDDOOAAC_01180 7.8e-132
PDDOOAAC_01181 3.8e-63 L Transposase
PDDOOAAC_01182 4.7e-115 ydjN U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PDDOOAAC_01183 3e-99 ydjN U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PDDOOAAC_01184 1.1e-128 znuB U ABC 3 transport family
PDDOOAAC_01185 2.3e-116 fhuC P ABC transporter
PDDOOAAC_01186 6e-155 psaA P Belongs to the bacterial solute-binding protein 9 family
PDDOOAAC_01187 1.1e-40 K helix_turn_helix, Arsenical Resistance Operon Repressor
PDDOOAAC_01188 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
PDDOOAAC_01189 6.3e-168 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PDDOOAAC_01190 1.2e-138 fruR K DeoR C terminal sensor domain
PDDOOAAC_01193 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PDDOOAAC_01194 8.7e-27
PDDOOAAC_01195 7.1e-33
PDDOOAAC_01196 1.9e-33 yozG K Transcriptional regulator
PDDOOAAC_01197 4.8e-54 S Enterocin A Immunity
PDDOOAAC_01198 1.4e-12 S Enterocin A Immunity
PDDOOAAC_01199 1.4e-194 S Archaea bacterial proteins of unknown function
PDDOOAAC_01200 1.5e-135 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PDDOOAAC_01201 3.2e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PDDOOAAC_01202 1.7e-207 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
PDDOOAAC_01203 1.6e-120 K response regulator
PDDOOAAC_01204 0.0 V ABC transporter
PDDOOAAC_01205 1.5e-295 V ABC transporter, ATP-binding protein
PDDOOAAC_01206 6.4e-137 XK27_01040 S Protein of unknown function (DUF1129)
PDDOOAAC_01207 1.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PDDOOAAC_01208 1.4e-43 yyzM S Bacterial protein of unknown function (DUF951)
PDDOOAAC_01209 5e-154 spo0J K Belongs to the ParB family
PDDOOAAC_01210 1.1e-136 soj D Sporulation initiation inhibitor
PDDOOAAC_01211 1.2e-146 noc K Belongs to the ParB family
PDDOOAAC_01212 1.6e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PDDOOAAC_01213 3.6e-83 cvpA S Colicin V production protein
PDDOOAAC_01214 8.6e-181 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDDOOAAC_01215 2.5e-149 3.1.3.48 T Tyrosine phosphatase family
PDDOOAAC_01216 5e-96 azr 1.5.1.36 S NADPH-dependent FMN reductase
PDDOOAAC_01217 1.8e-93 nqr 1.5.1.36 S NADPH-dependent FMN reductase
PDDOOAAC_01218 1.2e-109 K WHG domain
PDDOOAAC_01219 8e-38
PDDOOAAC_01220 3.9e-270 pipD E Dipeptidase
PDDOOAAC_01221 1.1e-116 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PDDOOAAC_01222 3.1e-166 hrtB V ABC transporter permease
PDDOOAAC_01223 7e-95 ygfC K Bacterial regulatory proteins, tetR family
PDDOOAAC_01224 7.9e-111 G phosphoglycerate mutase
PDDOOAAC_01225 5e-139 aroD S Alpha/beta hydrolase family
PDDOOAAC_01226 3e-139 S Belongs to the UPF0246 family
PDDOOAAC_01227 1.7e-119
PDDOOAAC_01228 2.7e-151 2.7.7.12 C Domain of unknown function (DUF4931)
PDDOOAAC_01229 1.4e-183 S Putative peptidoglycan binding domain
PDDOOAAC_01230 1.8e-24
PDDOOAAC_01231 5.9e-248 dtpT U amino acid peptide transporter
PDDOOAAC_01232 0.0 pepN 3.4.11.2 E aminopeptidase
PDDOOAAC_01233 5.3e-57 lysM M LysM domain
PDDOOAAC_01234 2.5e-170
PDDOOAAC_01235 6e-214 mdtG EGP Major facilitator Superfamily
PDDOOAAC_01236 2.4e-228 L Transposase
PDDOOAAC_01237 1.8e-13 ytgB S Transglycosylase associated protein
PDDOOAAC_01238 5.9e-52 K helix_turn_helix gluconate operon transcriptional repressor
PDDOOAAC_01239 2.7e-97 yieF S NADPH-dependent FMN reductase
PDDOOAAC_01240 1.2e-09 ymdB S Macro domain protein
PDDOOAAC_01241 1.6e-152 malG P ABC transporter permease
PDDOOAAC_01242 5.9e-247 malF P Binding-protein-dependent transport system inner membrane component
PDDOOAAC_01243 1.4e-210 malE G Bacterial extracellular solute-binding protein
PDDOOAAC_01244 8.3e-207 msmX P Belongs to the ABC transporter superfamily
PDDOOAAC_01245 4.8e-117 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PDDOOAAC_01246 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PDDOOAAC_01247 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PDDOOAAC_01248 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
PDDOOAAC_01249 2.9e-150 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDDOOAAC_01250 3e-173 yvdE K helix_turn _helix lactose operon repressor
PDDOOAAC_01251 3e-147 ptp2 3.1.3.48 T Tyrosine phosphatase family
PDDOOAAC_01252 6.2e-166 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PDDOOAAC_01253 4.8e-85 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PDDOOAAC_01254 2.1e-151 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PDDOOAAC_01256 9.3e-132 cobQ S glutamine amidotransferase
PDDOOAAC_01257 2.3e-81 M NlpC/P60 family
PDDOOAAC_01258 5.4e-151 EG EamA-like transporter family
PDDOOAAC_01259 9.3e-156 EG EamA-like transporter family
PDDOOAAC_01260 1.1e-107
PDDOOAAC_01261 2e-75
PDDOOAAC_01262 1.5e-113 XK27_05540 S DUF218 domain
PDDOOAAC_01263 7.4e-181 yheS_2 S ATPases associated with a variety of cellular activities
PDDOOAAC_01264 2e-80
PDDOOAAC_01265 8.8e-57
PDDOOAAC_01266 7.6e-244 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PDDOOAAC_01267 3.3e-247 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PDDOOAAC_01268 5.7e-183 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PDDOOAAC_01271 2.2e-201 4.2.1.126 S Bacterial protein of unknown function (DUF871)
PDDOOAAC_01272 2.2e-190 asnA 6.3.1.1 F aspartate--ammonia ligase
PDDOOAAC_01273 2.2e-236 steT_1 E amino acid
PDDOOAAC_01274 4.1e-138 puuD S peptidase C26
PDDOOAAC_01275 8.6e-246 yifK E Amino acid permease
PDDOOAAC_01276 4.1e-216 cycA E Amino acid permease
PDDOOAAC_01277 2e-127
PDDOOAAC_01278 9.3e-118 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PDDOOAAC_01279 0.0 clpE O AAA domain (Cdc48 subfamily)
PDDOOAAC_01280 3.7e-168 S Alpha/beta hydrolase of unknown function (DUF915)
PDDOOAAC_01281 3.4e-223 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDDOOAAC_01282 1.4e-119 XK27_06785 V ABC transporter, ATP-binding protein
PDDOOAAC_01283 2.2e-164 XK27_06780 V ABC transporter permease
PDDOOAAC_01284 3.6e-35
PDDOOAAC_01285 1.8e-282 ytgP S Polysaccharide biosynthesis protein
PDDOOAAC_01286 1.8e-149 lysA2 M Glycosyl hydrolases family 25
PDDOOAAC_01287 8.5e-122 S Protein of unknown function (DUF975)
PDDOOAAC_01288 1.7e-41
PDDOOAAC_01289 4.4e-81 S CAAX protease self-immunity
PDDOOAAC_01290 1.2e-10
PDDOOAAC_01291 5.1e-173 pbpX2 V Beta-lactamase
PDDOOAAC_01292 1e-248 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PDDOOAAC_01293 5.7e-36 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDDOOAAC_01294 9.2e-239 dltB M MBOAT, membrane-bound O-acyltransferase family
PDDOOAAC_01295 1.4e-292 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDDOOAAC_01296 2.6e-18 S D-Ala-teichoic acid biosynthesis protein
PDDOOAAC_01297 3.2e-49
PDDOOAAC_01298 9.4e-214 ywhK S Membrane
PDDOOAAC_01299 3.9e-81 ykuL S (CBS) domain
PDDOOAAC_01300 0.0 cadA P P-type ATPase
PDDOOAAC_01301 7.2e-201 napA P Sodium/hydrogen exchanger family
PDDOOAAC_01302 1.7e-48 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PDDOOAAC_01303 1.6e-47 S YoeB-like toxin of bacterial type II toxin-antitoxin system
PDDOOAAC_01304 2.5e-281 V ABC transporter transmembrane region
PDDOOAAC_01305 2.5e-66 S Putative adhesin
PDDOOAAC_01306 1e-151 mutR K Helix-turn-helix XRE-family like proteins
PDDOOAAC_01307 8.4e-39
PDDOOAAC_01308 4.3e-118 S CAAX protease self-immunity
PDDOOAAC_01309 3.4e-192 S DUF218 domain
PDDOOAAC_01310 0.0 macB_3 V ABC transporter, ATP-binding protein
PDDOOAAC_01311 2.9e-97 S ECF transporter, substrate-specific component
PDDOOAAC_01312 1.7e-159 yeaE S Aldo/keto reductase family
PDDOOAAC_01313 2.2e-131 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PDDOOAAC_01314 1.8e-07 ybbH_2 K rpiR family
PDDOOAAC_01315 2.7e-117 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PDDOOAAC_01316 1.5e-126 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PDDOOAAC_01317 7.7e-146 cof S haloacid dehalogenase-like hydrolase
PDDOOAAC_01318 9.1e-229 pbuG S permease
PDDOOAAC_01319 6.5e-38 S cog cog1373
PDDOOAAC_01320 1.6e-150 S cog cog1373
PDDOOAAC_01321 1.3e-131 K helix_turn_helix, mercury resistance
PDDOOAAC_01322 1.7e-227 pbuG S permease
PDDOOAAC_01323 3.7e-244 S Uncharacterised protein family (UPF0236)
PDDOOAAC_01324 9.8e-239 amtB P ammonium transporter
PDDOOAAC_01325 1.5e-223 pbuG S permease
PDDOOAAC_01326 5.1e-35
PDDOOAAC_01327 2.7e-76 atkY K Penicillinase repressor
PDDOOAAC_01328 2e-64 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PDDOOAAC_01329 1.4e-49 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PDDOOAAC_01330 0.0 copA 3.6.3.54 P P-type ATPase
PDDOOAAC_01331 8.2e-25 S CAAX protease self-immunity
PDDOOAAC_01332 1.3e-17
PDDOOAAC_01333 8.8e-209
PDDOOAAC_01334 1.8e-279 clcA P chloride
PDDOOAAC_01335 2.1e-268 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PDDOOAAC_01336 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PDDOOAAC_01337 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PDDOOAAC_01338 1.4e-251 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PDDOOAAC_01339 3.9e-143 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PDDOOAAC_01340 3.9e-60 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PDDOOAAC_01341 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PDDOOAAC_01342 4.1e-256 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PDDOOAAC_01343 3.3e-195 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PDDOOAAC_01344 1.7e-34 yaaA S S4 domain protein YaaA
PDDOOAAC_01345 9e-209 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PDDOOAAC_01346 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDDOOAAC_01347 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDDOOAAC_01348 4.2e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
PDDOOAAC_01349 7.9e-75 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PDDOOAAC_01350 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PDDOOAAC_01351 1.1e-31 S SLAP domain
PDDOOAAC_01352 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PDDOOAAC_01353 2.2e-68 rplI J Binds to the 23S rRNA
PDDOOAAC_01354 2.7e-255 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PDDOOAAC_01355 4.3e-164 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
PDDOOAAC_01356 5e-173 degV S DegV family
PDDOOAAC_01357 1.9e-42 L transposase, IS605 OrfB family
PDDOOAAC_01358 1.2e-132 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PDDOOAAC_01359 1.8e-201 csaB M Glycosyl transferases group 1
PDDOOAAC_01360 2.8e-282 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDDOOAAC_01361 1.8e-153 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PDDOOAAC_01362 6.6e-221 L Probable transposase
PDDOOAAC_01363 3.9e-62 pacL 3.6.3.8 P P-type ATPase
PDDOOAAC_01364 7e-295 pacL 3.6.3.8 P P-type ATPase
PDDOOAAC_01365 2e-21 pacL 3.6.3.8 P P-type ATPase
PDDOOAAC_01366 1.4e-44 pacL 3.6.3.8 P P-type ATPase
PDDOOAAC_01367 2.1e-224 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PDDOOAAC_01368 7.1e-259 epsU S Polysaccharide biosynthesis protein
PDDOOAAC_01369 2.2e-133 M Glycosyltransferase sugar-binding region containing DXD motif
PDDOOAAC_01370 5.3e-86 ydcK S Belongs to the SprT family
PDDOOAAC_01372 2.9e-103 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
PDDOOAAC_01373 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PDDOOAAC_01374 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PDDOOAAC_01375 1.1e-206 camS S sex pheromone
PDDOOAAC_01376 2.9e-48 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDDOOAAC_01377 4.2e-259 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PDDOOAAC_01378 6.4e-276 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDDOOAAC_01379 3e-170 yegS 2.7.1.107 G Lipid kinase
PDDOOAAC_01380 9.7e-113 S Protein of unknown function (DUF1211)
PDDOOAAC_01381 1.4e-119 ybhL S Belongs to the BI1 family
PDDOOAAC_01382 5.6e-53
PDDOOAAC_01383 4.6e-247 nhaC C Na H antiporter NhaC
PDDOOAAC_01384 1.1e-253 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDDOOAAC_01385 2.6e-27 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PDDOOAAC_01386 2.1e-123 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PDDOOAAC_01387 7.3e-109 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
PDDOOAAC_01388 1e-27 cspA K Cold shock protein
PDDOOAAC_01390 4.6e-96 MA20_25245 K Acetyltransferase (GNAT) domain
PDDOOAAC_01395 3.1e-241 emrY EGP Major facilitator Superfamily
PDDOOAAC_01396 6.3e-18 yxdD K Bacterial regulatory proteins, tetR family
PDDOOAAC_01397 1.8e-209 4.2.1.53 S Myosin-crossreactive antigen
PDDOOAAC_01398 6.1e-70 4.2.1.53 S MCRA family
PDDOOAAC_01399 1e-75 2.3.1.128 K Acetyltransferase (GNAT) domain
PDDOOAAC_01400 2e-89
PDDOOAAC_01401 6.9e-23 yphI 1.14.99.57 S Antibiotic biosynthesis monooxygenase
PDDOOAAC_01402 3.9e-101 pncA Q Isochorismatase family
PDDOOAAC_01403 1.1e-27 L COG2963 Transposase and inactivated derivatives
PDDOOAAC_01404 1.5e-77 L COG2963 Transposase and inactivated derivatives
PDDOOAAC_01405 9.5e-44 L transposase activity
PDDOOAAC_01406 4.4e-29
PDDOOAAC_01407 8.9e-240 pyrP F Permease
PDDOOAAC_01408 2e-89 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PDDOOAAC_01409 1.5e-259 emrY EGP Major facilitator Superfamily
PDDOOAAC_01410 9.6e-217 mdtG EGP Major facilitator Superfamily
PDDOOAAC_01411 3.9e-209 pepA E M42 glutamyl aminopeptidase
PDDOOAAC_01412 1.9e-308 ybiT S ABC transporter, ATP-binding protein
PDDOOAAC_01413 2.7e-29
PDDOOAAC_01414 1.4e-56
PDDOOAAC_01415 1.9e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
PDDOOAAC_01416 1.6e-146 glnH ET ABC transporter
PDDOOAAC_01417 5.1e-81 K Transcriptional regulator, MarR family
PDDOOAAC_01418 2e-287 XK27_09600 V ABC transporter, ATP-binding protein
PDDOOAAC_01419 0.0 V ABC transporter transmembrane region
PDDOOAAC_01420 9.3e-101 S ABC-type cobalt transport system, permease component
PDDOOAAC_01421 1.2e-190 EGP Major facilitator superfamily
PDDOOAAC_01422 1.5e-112 udk 2.7.1.48 F Zeta toxin
PDDOOAAC_01423 4.8e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDDOOAAC_01424 9e-150 glnH ET ABC transporter substrate-binding protein
PDDOOAAC_01425 5.1e-108 gluC P ABC transporter permease
PDDOOAAC_01426 7.5e-107 glnP P ABC transporter permease
PDDOOAAC_01427 4.7e-74 S Protein of unknown function (DUF2974)
PDDOOAAC_01428 1e-24 S Protein of unknown function (DUF2974)
PDDOOAAC_01429 2.6e-25 S Protein of unknown function (DUF2974)
PDDOOAAC_01430 2.9e-90 S SLAP domain
PDDOOAAC_01431 6.7e-232 G Bacterial extracellular solute-binding protein
PDDOOAAC_01432 2.2e-161 2.7.7.12 C Domain of unknown function (DUF4931)
PDDOOAAC_01433 1e-162 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PDDOOAAC_01434 2.6e-126 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PDDOOAAC_01435 0.0 kup P Transport of potassium into the cell
PDDOOAAC_01436 4.8e-176 rihB 3.2.2.1 F Nucleoside
PDDOOAAC_01437 5.7e-132 gntR K UbiC transcription regulator-associated domain protein
PDDOOAAC_01438 4.3e-152 S hydrolase
PDDOOAAC_01439 7.8e-58 S Enterocin A Immunity
PDDOOAAC_01440 1.1e-134 glcR K DeoR C terminal sensor domain
PDDOOAAC_01441 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PDDOOAAC_01442 1.5e-160 rssA S Phospholipase, patatin family
PDDOOAAC_01443 2.4e-85 S hydrolase
PDDOOAAC_01444 0.0 glvC 2.7.1.199, 2.7.1.208 G phosphotransferase system, EIIB
PDDOOAAC_01445 7e-60 glvR K Helix-turn-helix domain, rpiR family
PDDOOAAC_01446 5e-30 glvR K Helix-turn-helix domain, rpiR family
PDDOOAAC_01447 8.3e-74
PDDOOAAC_01448 1.2e-85 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PDDOOAAC_01449 6.2e-39
PDDOOAAC_01450 2.5e-18 C nitroreductase
PDDOOAAC_01451 5.2e-10 C nitroreductase
PDDOOAAC_01452 1.6e-236 yhdP S Transporter associated domain
PDDOOAAC_01453 6.3e-102 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PDDOOAAC_01454 4.2e-226 potE E amino acid
PDDOOAAC_01455 3.7e-128 M Glycosyl hydrolases family 25
PDDOOAAC_01456 1.2e-206 yfmL 3.6.4.13 L DEAD DEAH box helicase
PDDOOAAC_01457 3.9e-243 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDDOOAAC_01459 7.9e-25
PDDOOAAC_01460 3.2e-214 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PDDOOAAC_01461 5.3e-90 gtcA S Teichoic acid glycosylation protein
PDDOOAAC_01462 1.3e-78 fld C Flavodoxin
PDDOOAAC_01463 1.7e-164 map 3.4.11.18 E Methionine Aminopeptidase
PDDOOAAC_01464 1.1e-151 yihY S Belongs to the UPF0761 family
PDDOOAAC_01465 2.3e-167 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PDDOOAAC_01466 7.6e-223 L transposase, IS605 OrfB family
PDDOOAAC_01467 1e-215 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PDDOOAAC_01468 5.5e-46
PDDOOAAC_01469 6e-97 L An automated process has identified a potential problem with this gene model
PDDOOAAC_01472 1.4e-203 L COG2826 Transposase and inactivated derivatives, IS30 family
PDDOOAAC_01473 1.4e-20 S DNA primase
PDDOOAAC_01474 1.3e-20
PDDOOAAC_01475 1.7e-36
PDDOOAAC_01478 2.3e-19
PDDOOAAC_01479 1.5e-53 tnpR1 L Resolvase, N terminal domain
PDDOOAAC_01480 1.7e-47 tnpR1 L Resolvase, N terminal domain
PDDOOAAC_01481 4.7e-260 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDDOOAAC_01482 1.9e-144 recX 2.4.1.337 GT4 S Regulatory protein RecX
PDDOOAAC_01483 1.9e-86
PDDOOAAC_01484 2.5e-72
PDDOOAAC_01485 8.6e-159 hlyX S Transporter associated domain
PDDOOAAC_01486 5.4e-300 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PDDOOAAC_01487 2.5e-43 XK27_09445 S Domain of unknown function (DUF1827)
PDDOOAAC_01488 0.0 clpE O Belongs to the ClpA ClpB family
PDDOOAAC_01489 5.1e-27
PDDOOAAC_01490 8.5e-41 ptsH G phosphocarrier protein HPR
PDDOOAAC_01491 5.5e-306 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PDDOOAAC_01492 2.3e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PDDOOAAC_01493 1.1e-133 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PDDOOAAC_01494 5e-159 coiA 3.6.4.12 S Competence protein
PDDOOAAC_01495 1.2e-109 yjbH Q Thioredoxin
PDDOOAAC_01496 1.2e-109 yjbK S CYTH
PDDOOAAC_01497 2.3e-113 yjbM 2.7.6.5 S RelA SpoT domain protein
PDDOOAAC_01498 6e-154 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PDDOOAAC_01499 1.5e-169 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PDDOOAAC_01500 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
PDDOOAAC_01501 1.3e-109 S SNARE associated Golgi protein
PDDOOAAC_01502 7.5e-202 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PDDOOAAC_01503 0.0 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
PDDOOAAC_01504 1.9e-65 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PDDOOAAC_01505 7.3e-209 yubA S AI-2E family transporter
PDDOOAAC_01506 5.5e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PDDOOAAC_01507 1.4e-68 WQ51_03320 S Protein of unknown function (DUF1149)
PDDOOAAC_01508 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PDDOOAAC_01509 7.9e-227 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
PDDOOAAC_01510 1.1e-234 S Peptidase M16
PDDOOAAC_01511 4e-133 IQ Enoyl-(Acyl carrier protein) reductase
PDDOOAAC_01512 1.5e-139 ymfM S Helix-turn-helix domain
PDDOOAAC_01513 1.9e-98 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PDDOOAAC_01514 1.4e-193 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PDDOOAAC_01515 5.8e-217 rny S Endoribonuclease that initiates mRNA decay
PDDOOAAC_01516 2.5e-206 tagO 2.7.8.33, 2.7.8.35 M transferase
PDDOOAAC_01517 4.5e-115 yvyE 3.4.13.9 S YigZ family
PDDOOAAC_01518 4.7e-246 comFA L Helicase C-terminal domain protein
PDDOOAAC_01519 6.5e-133 comFC S Competence protein
PDDOOAAC_01520 2.5e-95 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PDDOOAAC_01521 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PDDOOAAC_01522 1.1e-186 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PDDOOAAC_01523 4.4e-24
PDDOOAAC_01524 3e-173 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PDDOOAAC_01525 1e-156 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PDDOOAAC_01526 1.5e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PDDOOAAC_01527 1.2e-18 S SLAP domain
PDDOOAAC_01529 0.0 1.3.5.4 C FAD binding domain
PDDOOAAC_01530 9.5e-65 K Helix-turn-helix XRE-family like proteins
PDDOOAAC_01531 7.6e-62 K Helix-turn-helix XRE-family like proteins
PDDOOAAC_01532 1.6e-49 K Helix-turn-helix XRE-family like proteins
PDDOOAAC_01533 7.4e-117
PDDOOAAC_01535 1e-83 S Protein of unknown function (DUF3232)
PDDOOAAC_01536 1.9e-84 D nuclear chromosome segregation
PDDOOAAC_01537 2.9e-175 S SLAP domain
PDDOOAAC_01538 6.4e-111 K Helix-turn-helix XRE-family like proteins
PDDOOAAC_01539 4.6e-124
PDDOOAAC_01540 3.3e-65
PDDOOAAC_01541 1.2e-27 K Helix-turn-helix XRE-family like proteins
PDDOOAAC_01542 5.4e-127 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PDDOOAAC_01543 1.2e-141 K Helix-turn-helix domain
PDDOOAAC_01544 1.3e-229 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PDDOOAAC_01545 1.6e-216 iscS2 2.8.1.7 E Aminotransferase class V
PDDOOAAC_01546 1.7e-280 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PDDOOAAC_01547 2e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PDDOOAAC_01548 1.9e-80 yueI S Protein of unknown function (DUF1694)
PDDOOAAC_01549 4.4e-239 rarA L recombination factor protein RarA
PDDOOAAC_01550 2.5e-35
PDDOOAAC_01551 2.3e-78 usp6 T universal stress protein
PDDOOAAC_01552 1.9e-217 rodA D Belongs to the SEDS family
PDDOOAAC_01553 2.5e-33 S Protein of unknown function (DUF2969)
PDDOOAAC_01554 7.2e-49 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PDDOOAAC_01555 3e-176 mbl D Cell shape determining protein MreB Mrl
PDDOOAAC_01556 3.4e-30 ywzB S Protein of unknown function (DUF1146)
PDDOOAAC_01557 2.9e-54 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PDDOOAAC_01558 3.5e-242 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PDDOOAAC_01559 8.9e-173 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PDDOOAAC_01560 8.2e-282 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PDDOOAAC_01561 4.9e-91 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDDOOAAC_01562 6e-51 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PDDOOAAC_01563 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDDOOAAC_01564 3.8e-128 atpB C it plays a direct role in the translocation of protons across the membrane
PDDOOAAC_01565 2.6e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PDDOOAAC_01566 2.7e-188 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PDDOOAAC_01567 3.9e-156 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PDDOOAAC_01568 6.9e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PDDOOAAC_01569 2.2e-113 tdk 2.7.1.21 F thymidine kinase
PDDOOAAC_01570 1e-246 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
PDDOOAAC_01573 4.6e-196 ampC V Beta-lactamase
PDDOOAAC_01574 8.3e-134 EGP Major facilitator Superfamily
PDDOOAAC_01575 3.2e-21 EGP Major facilitator Superfamily
PDDOOAAC_01576 1.1e-15 EGP Major facilitator Superfamily
PDDOOAAC_01577 9.2e-261 pgi 5.3.1.9 G Belongs to the GPI family
PDDOOAAC_01578 8.3e-108 vanZ V VanZ like family
PDDOOAAC_01579 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PDDOOAAC_01580 6.9e-270 yclK 2.7.13.3 T Histidine kinase
PDDOOAAC_01581 3.5e-129 K Transcriptional regulatory protein, C terminal
PDDOOAAC_01582 7.1e-60 S SdpI/YhfL protein family
PDDOOAAC_01583 1.7e-168 manA 5.3.1.8 G mannose-6-phosphate isomerase
PDDOOAAC_01584 8.1e-171 patB 4.4.1.8 E Aminotransferase, class I
PDDOOAAC_01585 1.1e-36 patB 4.4.1.8 E Aminotransferase, class I
PDDOOAAC_01586 5e-67 M Protein of unknown function (DUF3737)
PDDOOAAC_01588 6.8e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDDOOAAC_01589 5.6e-186 ytxK 2.1.1.72 L N-6 DNA Methylase
PDDOOAAC_01590 7.8e-80 comGF U Putative Competence protein ComGF
PDDOOAAC_01591 1.7e-41
PDDOOAAC_01592 2.1e-73
PDDOOAAC_01593 1.4e-43 comGC U competence protein ComGC
PDDOOAAC_01594 1.9e-173 comGB NU type II secretion system
PDDOOAAC_01595 2.3e-176 comGA NU Type II IV secretion system protein
PDDOOAAC_01596 2.6e-132 yebC K Transcriptional regulatory protein
PDDOOAAC_01597 4.3e-89 S VanZ like family
PDDOOAAC_01598 4e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDDOOAAC_01600 1.5e-289 E Amino acid permease
PDDOOAAC_01601 4e-181 D Alpha beta
PDDOOAAC_01602 5e-300 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDDOOAAC_01603 0.0 bglP G phosphotransferase system
PDDOOAAC_01604 1.8e-142 licT K CAT RNA binding domain
PDDOOAAC_01605 6.2e-213 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PDDOOAAC_01606 4.9e-84 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PDDOOAAC_01607 1.9e-116
PDDOOAAC_01608 5.4e-147 S Sucrose-6F-phosphate phosphohydrolase
PDDOOAAC_01609 5.8e-149 S hydrolase
PDDOOAAC_01610 5.3e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PDDOOAAC_01611 2.8e-171 ybbR S YbbR-like protein
PDDOOAAC_01612 1.2e-149 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PDDOOAAC_01613 3.4e-205 potD P ABC transporter
PDDOOAAC_01614 1.4e-123 potC P ABC transporter permease
PDDOOAAC_01615 7.9e-130 potB P ABC transporter permease
PDDOOAAC_01616 5.9e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PDDOOAAC_01617 7e-164 murB 1.3.1.98 M Cell wall formation
PDDOOAAC_01618 1.4e-98 dnaQ 2.7.7.7 L DNA polymerase III
PDDOOAAC_01619 6.4e-90 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PDDOOAAC_01620 7.3e-178 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PDDOOAAC_01621 1.7e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PDDOOAAC_01622 7.7e-152 ycsE S Sucrose-6F-phosphate phosphohydrolase
PDDOOAAC_01623 5.3e-95
PDDOOAAC_01624 1.2e-143 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PDDOOAAC_01625 2.7e-227 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PDDOOAAC_01626 5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PDDOOAAC_01627 1.2e-188 cggR K Putative sugar-binding domain
PDDOOAAC_01629 6.5e-142
PDDOOAAC_01630 1.6e-63
PDDOOAAC_01631 2.2e-33
PDDOOAAC_01632 1e-146 ycaM E amino acid
PDDOOAAC_01633 3.4e-49 ycaM E amino acid
PDDOOAAC_01634 3.6e-151 S haloacid dehalogenase-like hydrolase
PDDOOAAC_01635 0.0 S SH3-like domain
PDDOOAAC_01636 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PDDOOAAC_01637 1.1e-170 whiA K May be required for sporulation
PDDOOAAC_01638 5.4e-192 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PDDOOAAC_01639 3.1e-164 rapZ S Displays ATPase and GTPase activities
PDDOOAAC_01640 4.5e-81 S Short repeat of unknown function (DUF308)
PDDOOAAC_01641 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PDDOOAAC_01642 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PDDOOAAC_01643 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PDDOOAAC_01644 2e-61 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PDDOOAAC_01645 5.9e-41 L transposase, IS605 OrfB family
PDDOOAAC_01648 8e-168 psaA P Belongs to the bacterial solute-binding protein 9 family
PDDOOAAC_01651 4.3e-217 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PDDOOAAC_01652 1.6e-261 qacA EGP Major facilitator Superfamily
PDDOOAAC_01653 9.9e-12 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PDDOOAAC_01654 1.4e-64 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PDDOOAAC_01655 4.8e-52 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PDDOOAAC_01656 5.6e-118 3.6.1.27 I Acid phosphatase homologues
PDDOOAAC_01657 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDDOOAAC_01658 1e-293 ytgP S Polysaccharide biosynthesis protein
PDDOOAAC_01659 7.2e-09 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PDDOOAAC_01660 2.2e-154 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PDDOOAAC_01661 7.6e-23 dhaL 2.7.1.121 S Dak2
PDDOOAAC_01662 5.1e-68 infB UW LPXTG-motif cell wall anchor domain protein
PDDOOAAC_01663 9.4e-52 infB UW LPXTG-motif cell wall anchor domain protein
PDDOOAAC_01665 2.1e-20
PDDOOAAC_01666 2e-58 CO Thioredoxin
PDDOOAAC_01667 2e-115 M1-798 K Rhodanese Homology Domain
PDDOOAAC_01668 3.5e-174 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PDDOOAAC_01669 7.3e-16 frnE Q DSBA-like thioredoxin domain
PDDOOAAC_01670 5.5e-52 frnE Q DSBA-like thioredoxin domain
PDDOOAAC_01671 2.5e-31 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PDDOOAAC_01672 3.5e-138 yxeH S hydrolase
PDDOOAAC_01673 1.9e-37 S Enterocin A Immunity
PDDOOAAC_01674 2.6e-90 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
PDDOOAAC_01675 3.6e-96 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
PDDOOAAC_01676 4.4e-49 pspC KT PspC domain
PDDOOAAC_01678 6.9e-237 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PDDOOAAC_01679 3.1e-153 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PDDOOAAC_01680 3.1e-108 M ErfK YbiS YcfS YnhG
PDDOOAAC_01681 3e-90 padR K Virulence activator alpha C-term
PDDOOAAC_01682 6.2e-105 padC Q Phenolic acid decarboxylase
PDDOOAAC_01683 4.5e-106 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PDDOOAAC_01684 8.7e-11 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PDDOOAAC_01685 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PDDOOAAC_01686 1e-170 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PDDOOAAC_01687 1.9e-46 3.6.1.55 L NUDIX domain
PDDOOAAC_01688 8.1e-39
PDDOOAAC_01689 1.1e-30
PDDOOAAC_01690 4.7e-95 2.7.13.3 T GHKL domain
PDDOOAAC_01691 2.7e-143 K LytTr DNA-binding domain
PDDOOAAC_01692 1.1e-110 M LysM domain
PDDOOAAC_01693 4.4e-101
PDDOOAAC_01694 2.9e-114 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
PDDOOAAC_01695 3.2e-106
PDDOOAAC_01696 8.2e-27
PDDOOAAC_01697 1.6e-89 S GyrI-like small molecule binding domain
PDDOOAAC_01698 4.8e-17 yniG EGP Major facilitator Superfamily
PDDOOAAC_01699 2.1e-82 racA K Domain of unknown function (DUF1836)
PDDOOAAC_01700 1.6e-149 yitS S EDD domain protein, DegV family
PDDOOAAC_01701 1.3e-48
PDDOOAAC_01702 2.6e-42
PDDOOAAC_01703 1.5e-214 L transposase, IS605 OrfB family
PDDOOAAC_01704 1.9e-147 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PDDOOAAC_01705 9.8e-55
PDDOOAAC_01706 2.4e-283 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDDOOAAC_01707 7.8e-252 U The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDDOOAAC_01708 7.3e-138 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PDDOOAAC_01709 3.2e-84 mgtC S MgtC family
PDDOOAAC_01710 2.5e-09 5.3.3.2 C FMN-dependent dehydrogenase
PDDOOAAC_01711 8.2e-162 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PDDOOAAC_01712 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PDDOOAAC_01713 9.4e-56 yheA S Belongs to the UPF0342 family
PDDOOAAC_01714 2.9e-229 yhaO L Ser Thr phosphatase family protein
PDDOOAAC_01715 0.0 L AAA domain
PDDOOAAC_01716 1.3e-187 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
PDDOOAAC_01717 3.5e-155 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PDDOOAAC_01718 3.3e-26
PDDOOAAC_01719 3.1e-80 hit FG Scavenger mRNA decapping enzyme C-term binding
PDDOOAAC_01720 2.3e-34 S Plasmid maintenance system killer
PDDOOAAC_01721 1.4e-53 higA K Helix-turn-helix XRE-family like proteins
PDDOOAAC_01722 1.1e-135 ecsA V ABC transporter, ATP-binding protein
PDDOOAAC_01723 2.9e-213 ecsB U ABC transporter
PDDOOAAC_01724 2.6e-123 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PDDOOAAC_01725 7.3e-55 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PDDOOAAC_01726 3.3e-123 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDDOOAAC_01727 3.4e-260
PDDOOAAC_01730 4e-60 S Psort location Cytoplasmic, score
PDDOOAAC_01731 9.1e-253 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PDDOOAAC_01732 4.2e-68 M Peptidase family M1 domain
PDDOOAAC_01733 6.1e-103 M Peptidase family M1 domain
PDDOOAAC_01734 1.7e-40 L RelB antitoxin
PDDOOAAC_01735 8.5e-130 qmcA O prohibitin homologues
PDDOOAAC_01736 4.1e-16
PDDOOAAC_01737 8.1e-14
PDDOOAAC_01739 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PDDOOAAC_01740 1.2e-157 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PDDOOAAC_01741 2.7e-103 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PDDOOAAC_01742 1.6e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PDDOOAAC_01743 8.9e-248 dnaB L Replication initiation and membrane attachment
PDDOOAAC_01744 2.9e-165 dnaI L Primosomal protein DnaI
PDDOOAAC_01745 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PDDOOAAC_01746 1.8e-24 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PDDOOAAC_01747 4.9e-101 S Domain of unknown function (DUF389)
PDDOOAAC_01748 9.3e-30 astA 2.8.2.22 M Arylsulfotransferase Ig-like domain
PDDOOAAC_01749 5.5e-239 astA 2.8.2.22 M Arylsulfotransferase Ig-like domain
PDDOOAAC_01750 4.8e-55 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PDDOOAAC_01751 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PDDOOAAC_01752 5.1e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PDDOOAAC_01753 3.8e-93 yqeG S HAD phosphatase, family IIIA
PDDOOAAC_01754 1.5e-211 yqeH S Ribosome biogenesis GTPase YqeH
PDDOOAAC_01755 4.1e-121 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PDDOOAAC_01756 9.5e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PDDOOAAC_01757 6.9e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PDDOOAAC_01758 4.3e-214 ylbM S Belongs to the UPF0348 family
PDDOOAAC_01759 1.5e-95 yceD S Uncharacterized ACR, COG1399
PDDOOAAC_01760 1e-125 K response regulator
PDDOOAAC_01761 4.3e-278 arlS 2.7.13.3 T Histidine kinase
PDDOOAAC_01762 1.3e-84 S Aminoacyl-tRNA editing domain
PDDOOAAC_01763 4.1e-154 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PDDOOAAC_01764 2.4e-43 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PDDOOAAC_01765 1.1e-138 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDDOOAAC_01766 1.5e-61 yodB K Transcriptional regulator, HxlR family
PDDOOAAC_01767 1.5e-202 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PDDOOAAC_01768 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDDOOAAC_01769 2.4e-62 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDDOOAAC_01770 3.3e-169 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
PDDOOAAC_01771 4.9e-22 S Phage derived protein Gp49-like (DUF891)
PDDOOAAC_01772 5.3e-38 K Helix-turn-helix domain
PDDOOAAC_01773 1.8e-55 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
PDDOOAAC_01774 1.6e-123 gntR1 K UTRA
PDDOOAAC_01775 6e-213
PDDOOAAC_01778 1.4e-87
PDDOOAAC_01780 5.4e-267 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
PDDOOAAC_01781 3.2e-211 msmX P Belongs to the ABC transporter superfamily
PDDOOAAC_01782 9.5e-255 sacA 3.2.1.26 GH32 G Glycosyl hydrolases family 32
PDDOOAAC_01783 3.3e-155 msmG G Binding-protein-dependent transport system inner membrane component
PDDOOAAC_01784 4.5e-163 msmF P ABC-type sugar transport systems, permease components
PDDOOAAC_01785 7.3e-239 msmE G Bacterial extracellular solute-binding protein
PDDOOAAC_01786 6.2e-182 msmR K helix_turn _helix lactose operon repressor
PDDOOAAC_01787 3.3e-129 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PDDOOAAC_01788 7.6e-115 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
PDDOOAAC_01789 7.7e-103 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
PDDOOAAC_01790 2.6e-111 G Phosphoglycerate mutase family
PDDOOAAC_01791 1.3e-196 D nuclear chromosome segregation
PDDOOAAC_01792 7.3e-52 M LysM domain protein
PDDOOAAC_01793 5.6e-13
PDDOOAAC_01794 6.9e-156 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
PDDOOAAC_01795 7.8e-67
PDDOOAAC_01796 7.1e-32
PDDOOAAC_01797 4.1e-71 S Iron-sulphur cluster biosynthesis
PDDOOAAC_01798 2.2e-28 K Transcriptional regulator
PDDOOAAC_01799 1.2e-227 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PDDOOAAC_01800 4.2e-127 XK27_08435 K UTRA
PDDOOAAC_01802 1e-215 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDDOOAAC_01803 2.3e-155 CE10 I Belongs to the type-B carboxylesterase lipase family
PDDOOAAC_01804 1.5e-232 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PDDOOAAC_01805 1.3e-121 pts15C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDDOOAAC_01806 1.5e-23 pts15B 2.7.1.196, 2.7.1.205 G PTS family porter, IIB component
PDDOOAAC_01807 8.5e-25 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIA subunit
PDDOOAAC_01808 1.3e-19 S Domain of unknown function (DUF3284)
PDDOOAAC_01809 7.1e-132 K Psort location Cytoplasmic, score 8.87
PDDOOAAC_01810 4.4e-86 C FAD binding domain
PDDOOAAC_01811 3.5e-25 C FAD binding domain
PDDOOAAC_01812 1.2e-47 C FAD binding domain
PDDOOAAC_01814 1.7e-139 S Uncharacterized protein conserved in bacteria (DUF2263)
PDDOOAAC_01815 5.1e-60
PDDOOAAC_01816 0.0 lhr L DEAD DEAH box helicase
PDDOOAAC_01817 1.2e-249 P P-loop Domain of unknown function (DUF2791)
PDDOOAAC_01818 2.8e-260 S TerB-C domain
PDDOOAAC_01819 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
PDDOOAAC_01820 2.8e-30 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
PDDOOAAC_01821 2.9e-37
PDDOOAAC_01822 3.1e-133 4.1.1.44 S Carboxymuconolactone decarboxylase family
PDDOOAAC_01823 6.3e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDDOOAAC_01824 5.6e-36 S LPXTG cell wall anchor motif
PDDOOAAC_01825 6.8e-46 UW LPXTG-motif cell wall anchor domain protein
PDDOOAAC_01826 2.8e-79
PDDOOAAC_01827 1.8e-38
PDDOOAAC_01828 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PDDOOAAC_01829 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PDDOOAAC_01830 1.1e-237 cycA E Amino acid permease
PDDOOAAC_01831 2.4e-84 maa S transferase hexapeptide repeat
PDDOOAAC_01832 1.5e-127 K Transcriptional regulator
PDDOOAAC_01833 3.2e-62 manO S Domain of unknown function (DUF956)
PDDOOAAC_01834 1.6e-171 manN G system, mannose fructose sorbose family IID component
PDDOOAAC_01835 1.5e-133 manY G PTS system
PDDOOAAC_01836 4.6e-188 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PDDOOAAC_01838 4.3e-107 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
PDDOOAAC_01839 3.2e-31 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
PDDOOAAC_01840 1.2e-17
PDDOOAAC_01841 1.8e-72
PDDOOAAC_01842 1.8e-43 M Glycosyl transferase
PDDOOAAC_01843 1.3e-171 ydaM M Glycosyl transferase family group 2
PDDOOAAC_01844 1.1e-153 G Glycosyl hydrolases family 8
PDDOOAAC_01846 5.9e-120 yfbR S HD containing hydrolase-like enzyme
PDDOOAAC_01847 1.8e-156 L HNH nucleases
PDDOOAAC_01848 6.8e-136 glnQ E ABC transporter, ATP-binding protein
PDDOOAAC_01849 8.7e-290 glnP P ABC transporter permease
PDDOOAAC_01850 2.8e-122 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PDDOOAAC_01851 2.4e-62 yeaO S Protein of unknown function, DUF488
PDDOOAAC_01852 2.5e-120 terC P Integral membrane protein TerC family
PDDOOAAC_01853 3.9e-90 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
PDDOOAAC_01854 9.8e-129 cobB K SIR2 family
PDDOOAAC_01855 5.9e-85
PDDOOAAC_01856 2.7e-282 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDDOOAAC_01857 1.4e-175 S Alpha/beta hydrolase of unknown function (DUF915)
PDDOOAAC_01858 1.1e-144 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDDOOAAC_01859 1.2e-134 ypuA S Protein of unknown function (DUF1002)
PDDOOAAC_01860 1.2e-157 epsV 2.7.8.12 S glycosyl transferase family 2
PDDOOAAC_01861 2.5e-126 S Alpha/beta hydrolase family
PDDOOAAC_01862 2.8e-114 GM NmrA-like family
PDDOOAAC_01863 1.8e-53
PDDOOAAC_01864 2.9e-179 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDDOOAAC_01865 3.9e-122 luxT K Bacterial regulatory proteins, tetR family
PDDOOAAC_01866 1.5e-128
PDDOOAAC_01867 6e-261 glnPH2 P ABC transporter permease
PDDOOAAC_01868 1.8e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDDOOAAC_01869 6e-230 S Cysteine-rich secretory protein family
PDDOOAAC_01870 9e-206 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PDDOOAAC_01871 2.7e-92
PDDOOAAC_01872 4.5e-200 yibE S overlaps another CDS with the same product name
PDDOOAAC_01873 6.4e-129 yibF S overlaps another CDS with the same product name
PDDOOAAC_01874 8.4e-156 I alpha/beta hydrolase fold
PDDOOAAC_01875 3.4e-25
PDDOOAAC_01876 1.3e-105 L Resolvase, N terminal domain
PDDOOAAC_01877 1.5e-255 L Probable transposase
PDDOOAAC_01878 0.0 G Belongs to the glycosyl hydrolase 31 family
PDDOOAAC_01879 5.7e-80 ntd 2.4.2.6 F Nucleoside
PDDOOAAC_01880 5e-87 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PDDOOAAC_01881 7e-147 ptp3 3.1.3.48 T Tyrosine phosphatase family
PDDOOAAC_01882 8.5e-87 uspA T universal stress protein
PDDOOAAC_01883 1.6e-150 phnD P Phosphonate ABC transporter
PDDOOAAC_01884 3.7e-137 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PDDOOAAC_01885 6.1e-127 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PDDOOAAC_01886 4.6e-146 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PDDOOAAC_01887 4.3e-106 tag 3.2.2.20 L glycosylase
PDDOOAAC_01888 3.6e-82
PDDOOAAC_01889 1.4e-272 S Calcineurin-like phosphoesterase
PDDOOAAC_01890 0.0 asnB 6.3.5.4 E Asparagine synthase
PDDOOAAC_01891 4.7e-254 yxbA 6.3.1.12 S ATP-grasp enzyme
PDDOOAAC_01894 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PDDOOAAC_01895 9.6e-140 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDDOOAAC_01896 4.5e-100 S Iron-sulfur cluster assembly protein
PDDOOAAC_01897 2.4e-228 XK27_04775 S PAS domain
PDDOOAAC_01898 4.3e-225 yttB EGP Major facilitator Superfamily
PDDOOAAC_01899 0.0 pepO 3.4.24.71 O Peptidase family M13
PDDOOAAC_01900 1.6e-137 L transposase, IS605 OrfB family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)