ORF_ID e_value Gene_name EC_number CAZy COGs Description
PONIBJDO_00001 2.2e-251 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PONIBJDO_00002 9.5e-206 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PONIBJDO_00003 1.6e-81 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
PONIBJDO_00004 6.7e-10 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
PONIBJDO_00005 1.7e-34 yaaA S S4 domain protein YaaA
PONIBJDO_00006 1.2e-205 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PONIBJDO_00007 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PONIBJDO_00008 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PONIBJDO_00009 1.2e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
PONIBJDO_00010 1.4e-77 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PONIBJDO_00011 1.6e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PONIBJDO_00012 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PONIBJDO_00013 2e-74 rplI J Binds to the 23S rRNA
PONIBJDO_00014 1.5e-234 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PONIBJDO_00015 9.9e-206 yttB EGP Major facilitator Superfamily
PONIBJDO_00016 3.7e-54
PONIBJDO_00017 1.3e-157 S Polyphosphate nucleotide phosphotransferase, PPK2 family
PONIBJDO_00018 9.8e-09 K DNA-binding helix-turn-helix protein
PONIBJDO_00019 1.1e-125 O Bacterial dnaA protein
PONIBJDO_00020 3.5e-214 L Integrase core domain
PONIBJDO_00022 3.3e-74 K helix_turn_helix multiple antibiotic resistance protein
PONIBJDO_00023 2.1e-310 lmrA 3.6.3.44 V ABC transporter
PONIBJDO_00025 6.8e-130 K response regulator
PONIBJDO_00026 0.0 vicK 2.7.13.3 T Histidine kinase
PONIBJDO_00027 2.1e-246 yycH S YycH protein
PONIBJDO_00028 3.9e-148 yycI S YycH protein
PONIBJDO_00029 4.5e-154 vicX 3.1.26.11 S domain protein
PONIBJDO_00030 9.6e-215 htrA 3.4.21.107 O serine protease
PONIBJDO_00031 1.6e-88 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
PONIBJDO_00032 4.7e-177 ABC-SBP S ABC transporter
PONIBJDO_00033 1e-87 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PONIBJDO_00035 2.9e-96 S reductase
PONIBJDO_00036 1.9e-225 dhaT 1.1.1.1, 1.1.1.202 C Dehydrogenase
PONIBJDO_00037 7.5e-155 glcU U sugar transport
PONIBJDO_00038 4.7e-148 E Glyoxalase-like domain
PONIBJDO_00039 8.6e-145 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PONIBJDO_00040 1.9e-11 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
PONIBJDO_00041 8.9e-173 L PFAM Integrase catalytic region
PONIBJDO_00042 5.7e-144 bacG M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PONIBJDO_00043 4.4e-129 V ABC transporter
PONIBJDO_00044 2e-217 bacI V MacB-like periplasmic core domain
PONIBJDO_00045 3.5e-35
PONIBJDO_00046 8.9e-189 L PFAM Integrase catalytic region
PONIBJDO_00047 1.3e-260 S Putative peptidoglycan binding domain
PONIBJDO_00050 5.9e-30 2.7.13.3 T GHKL domain
PONIBJDO_00051 3.4e-185 L PFAM Integrase catalytic region
PONIBJDO_00052 5e-75 osmC O OsmC-like protein
PONIBJDO_00053 8e-177 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PONIBJDO_00054 6.1e-216 patA 2.6.1.1 E Aminotransferase
PONIBJDO_00055 7.8e-32
PONIBJDO_00056 0.0 clpL O associated with various cellular activities
PONIBJDO_00058 3.1e-104 wecD3 K PFAM GCN5-related N-acetyltransferase
PONIBJDO_00059 7.2e-283 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PONIBJDO_00060 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PONIBJDO_00061 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PONIBJDO_00062 1.5e-172 malR K Transcriptional regulator, LacI family
PONIBJDO_00063 2.4e-212 phbA 2.3.1.9 I Belongs to the thiolase family
PONIBJDO_00064 2.1e-260 S Uncharacterised protein family (UPF0236)
PONIBJDO_00065 1.1e-256 malT G Major Facilitator
PONIBJDO_00066 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PONIBJDO_00067 5.4e-121 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PONIBJDO_00068 1.9e-75
PONIBJDO_00069 6.3e-87 2.7.6.5 T Region found in RelA / SpoT proteins
PONIBJDO_00070 3.3e-118 K response regulator
PONIBJDO_00071 5.3e-226 sptS 2.7.13.3 T Histidine kinase
PONIBJDO_00072 2.5e-209 yfeO P Voltage gated chloride channel
PONIBJDO_00073 1.7e-128 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
PONIBJDO_00074 6.6e-136 puuD S peptidase C26
PONIBJDO_00075 3.8e-167 yvgN C Aldo keto reductase
PONIBJDO_00076 6.1e-48 1.14.12.17 S Cupin 2, conserved barrel domain protein
PONIBJDO_00077 0.0 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
PONIBJDO_00078 1.1e-86 hmpT S ECF-type riboflavin transporter, S component
PONIBJDO_00079 4.2e-261 nox C NADH oxidase
PONIBJDO_00080 2.5e-183 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PONIBJDO_00081 4e-253 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PONIBJDO_00082 1.4e-78
PONIBJDO_00083 4.1e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PONIBJDO_00085 4.3e-13 K Transcriptional regulator, TetR family
PONIBJDO_00086 6.2e-76 K Transcriptional regulator, TetR family
PONIBJDO_00087 2.2e-72
PONIBJDO_00088 1.8e-268 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
PONIBJDO_00089 1.8e-260 tagE2 2.4.1.52 GT4 M Poly(Glycerol-phosphate) alpha-glucosyltransferase
PONIBJDO_00090 7.1e-274 M domain protein
PONIBJDO_00091 0.0 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
PONIBJDO_00092 1.9e-214 G Major Facilitator
PONIBJDO_00093 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PONIBJDO_00094 3.2e-203 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PONIBJDO_00095 4.7e-260 G Major Facilitator
PONIBJDO_00096 2.4e-181 K Transcriptional regulator, LacI family
PONIBJDO_00097 2.6e-266 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PONIBJDO_00099 1.2e-100 nqr 1.5.1.36 S reductase
PONIBJDO_00100 6.1e-198 XK27_09615 S reductase
PONIBJDO_00101 1.6e-179 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PONIBJDO_00102 2.7e-209 L Transposase
PONIBJDO_00103 3.8e-106 tra L Transposase and inactivated derivatives, IS30 family
PONIBJDO_00104 9.9e-37 L Transposase
PONIBJDO_00105 1.2e-190 L PFAM Integrase catalytic region
PONIBJDO_00106 3.9e-27 mleP3 S Membrane transport protein
PONIBJDO_00107 7.3e-121 T Transcriptional regulatory protein, C terminal
PONIBJDO_00108 9.9e-239 T GHKL domain
PONIBJDO_00109 4.7e-109 S Peptidase propeptide and YPEB domain
PONIBJDO_00110 3e-76 P FAD-binding domain
PONIBJDO_00111 4.3e-55 yphJ 4.1.1.44 S decarboxylase
PONIBJDO_00112 5.3e-83 K Bacterial regulatory proteins, tetR family
PONIBJDO_00113 2.2e-77 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PONIBJDO_00114 8.2e-166 K COG COG0846 NAD-dependent protein deacetylases, SIR2 family
PONIBJDO_00115 7.3e-166 S Oxidoreductase, aldo keto reductase family protein
PONIBJDO_00116 2.7e-85 C Flavodoxin
PONIBJDO_00117 5.6e-158 K Transcriptional regulator
PONIBJDO_00118 6.3e-88 lacA S transferase hexapeptide repeat
PONIBJDO_00119 9.4e-32 S thiolester hydrolase activity
PONIBJDO_00120 2e-152 S Alpha beta hydrolase
PONIBJDO_00121 3.3e-92 padC Q Phenolic acid decarboxylase
PONIBJDO_00122 1.2e-91 padR K Virulence activator alpha C-term
PONIBJDO_00123 4.7e-66 GM NAD(P)H-binding
PONIBJDO_00124 2.3e-155 ypuA S Protein of unknown function (DUF1002)
PONIBJDO_00125 5.2e-184 ansA 3.5.1.1 EJ L-asparaginase, type I
PONIBJDO_00126 4.3e-59 K Transcriptional regulator
PONIBJDO_00127 4.3e-40 K Transcriptional regulator
PONIBJDO_00128 7.6e-163 akr5f 1.1.1.346 S reductase
PONIBJDO_00129 9e-104 K Transcriptional regulator C-terminal region
PONIBJDO_00130 2.1e-74 S membrane
PONIBJDO_00131 6.1e-88 S membrane
PONIBJDO_00132 1.2e-112 GM NAD(P)H-binding
PONIBJDO_00133 1.1e-64 yneR
PONIBJDO_00134 3.4e-131 yfeJ 6.3.5.2 F glutamine amidotransferase
PONIBJDO_00135 3.7e-140 T EAL domain
PONIBJDO_00136 2e-169 L Transposase and inactivated derivatives IS30 family
PONIBJDO_00137 4.8e-58 2.7.7.65 T GGDEF domain
PONIBJDO_00138 6.2e-190 L PFAM Integrase catalytic region
PONIBJDO_00139 7.2e-65 2.7.7.65 T GGDEF domain
PONIBJDO_00140 5e-122 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
PONIBJDO_00141 1.3e-256 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PONIBJDO_00142 1.9e-197 asnA 6.3.1.1 F aspartate--ammonia ligase
PONIBJDO_00143 2e-92 folT S ECF transporter, substrate-specific component
PONIBJDO_00144 0.0 pepN 3.4.11.2 E aminopeptidase
PONIBJDO_00145 2e-112 ylbE GM NAD dependent epimerase dehydratase family protein
PONIBJDO_00146 9.8e-255 pepC 3.4.22.40 E aminopeptidase
PONIBJDO_00147 6.5e-210 EGP Major facilitator Superfamily
PONIBJDO_00148 1.8e-229
PONIBJDO_00149 5.5e-26 K Transcriptional regulator, HxlR family
PONIBJDO_00150 1.4e-44 K Transcriptional regulator, HxlR family
PONIBJDO_00151 1.4e-107 XK27_02070 S Nitroreductase family
PONIBJDO_00152 6.2e-51 hxlR K Transcriptional regulator, HxlR family
PONIBJDO_00153 3e-119 GM NmrA-like family
PONIBJDO_00154 1.7e-70 elaA S Gnat family
PONIBJDO_00155 1.8e-39 S Cytochrome B5
PONIBJDO_00156 1e-184 L PFAM Integrase catalytic region
PONIBJDO_00157 5.4e-09 S Cytochrome B5
PONIBJDO_00158 7.8e-41 S Cytochrome B5
PONIBJDO_00159 2e-211 yxjG_1 E methionine synthase, vitamin-B12 independent
PONIBJDO_00161 2.3e-181 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PONIBJDO_00162 6.4e-241 E amino acid
PONIBJDO_00163 2.1e-147 yxiO S Vacuole effluxer Atg22 like
PONIBJDO_00165 3.6e-93 L Helix-turn-helix domain
PONIBJDO_00166 9.2e-159 L hmm pf00665
PONIBJDO_00167 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PONIBJDO_00168 3e-34
PONIBJDO_00169 2.5e-289 mntH P H( )-stimulated, divalent metal cation uptake system
PONIBJDO_00170 9.9e-191 tdh 1.1.1.14 E Alcohol dehydrogenase GroES-like domain
PONIBJDO_00171 2.6e-86 ygfC K transcriptional regulator (TetR family)
PONIBJDO_00172 2.1e-183 hrtB V ABC transporter permease
PONIBJDO_00173 1.8e-114 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PONIBJDO_00174 0.0 yhcA V ABC transporter, ATP-binding protein
PONIBJDO_00175 4.6e-38
PONIBJDO_00176 3.5e-49 czrA K Transcriptional regulator, ArsR family
PONIBJDO_00177 2e-212 acm2 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PONIBJDO_00178 5.1e-173 scrR K Transcriptional regulator, LacI family
PONIBJDO_00179 3e-24
PONIBJDO_00180 8.2e-103
PONIBJDO_00181 2.6e-214 yttB EGP Major facilitator Superfamily
PONIBJDO_00182 3.7e-243 hisS 6.1.1.21 J histidyl-tRNA synthetase
PONIBJDO_00183 2.2e-87
PONIBJDO_00184 3.5e-109 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
PONIBJDO_00185 2.1e-260 S Putative peptidoglycan binding domain
PONIBJDO_00186 6.8e-259 S Uncharacterised protein family (UPF0236)
PONIBJDO_00187 1.4e-124 yciB M ErfK YbiS YcfS YnhG
PONIBJDO_00189 7.2e-101
PONIBJDO_00190 3.5e-219 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PONIBJDO_00191 5.5e-126 S Alpha beta hydrolase
PONIBJDO_00192 1.7e-207 gldA 1.1.1.6 C dehydrogenase
PONIBJDO_00193 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PONIBJDO_00194 3.8e-41
PONIBJDO_00195 8e-125 pgm3 3.1.3.73 G phosphoglycerate mutase family
PONIBJDO_00196 7.2e-96 L Helix-turn-helix domain
PONIBJDO_00197 3.7e-138 L hmm pf00665
PONIBJDO_00198 1.1e-27 S C4-dicarboxylate anaerobic carrier
PONIBJDO_00199 1.8e-240 S C4-dicarboxylate anaerobic carrier
PONIBJDO_00200 1.8e-251 nhaC C Na H antiporter NhaC
PONIBJDO_00201 1.6e-241 pbuX F xanthine permease
PONIBJDO_00202 1.4e-283 pipD E Dipeptidase
PONIBJDO_00203 3.9e-304 L Transposase
PONIBJDO_00204 2.2e-168 corA P CorA-like Mg2+ transporter protein
PONIBJDO_00205 4.5e-166 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PONIBJDO_00206 2.3e-131 terC P membrane
PONIBJDO_00207 2.1e-54 trxA O Belongs to the thioredoxin family
PONIBJDO_00208 1.6e-236 mepA V MATE efflux family protein
PONIBJDO_00209 4.2e-55 M Leucine-rich repeat (LRR) protein
PONIBJDO_00210 6.8e-56 K Transcriptional regulator, ArsR family
PONIBJDO_00211 2.5e-90 P Cadmium resistance transporter
PONIBJDO_00212 4.8e-137 XK27_08845 S ABC transporter, ATP-binding protein
PONIBJDO_00213 1.1e-153 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PONIBJDO_00214 2.9e-182 ABC-SBP S ABC transporter
PONIBJDO_00215 1.3e-73 M PFAM NLP P60 protein
PONIBJDO_00216 2e-169 L Transposase and inactivated derivatives IS30 family
PONIBJDO_00218 3.8e-106 tra L Transposase and inactivated derivatives, IS30 family
PONIBJDO_00219 1.2e-190 L PFAM Integrase catalytic region
PONIBJDO_00220 7.4e-18
PONIBJDO_00221 7.8e-272 S ABC transporter, ATP-binding protein
PONIBJDO_00222 2.3e-142 S Putative ABC-transporter type IV
PONIBJDO_00223 2e-106 NU mannosyl-glycoprotein
PONIBJDO_00224 3.2e-248 brnQ U Component of the transport system for branched-chain amino acids
PONIBJDO_00225 1.5e-228 S Uncharacterized protein conserved in bacteria (DUF2325)
PONIBJDO_00226 7.6e-205 nrnB S DHHA1 domain
PONIBJDO_00227 6.9e-49
PONIBJDO_00228 2.9e-27 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PONIBJDO_00229 5.8e-98 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PONIBJDO_00230 2e-15 S Domain of unknown function (DUF4767)
PONIBJDO_00231 9.5e-55
PONIBJDO_00232 5.4e-116 yrkL S Flavodoxin-like fold
PONIBJDO_00234 1.6e-64 yeaO S Protein of unknown function, DUF488
PONIBJDO_00235 7.5e-120 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PONIBJDO_00236 3e-204 3.1.3.1 S associated with various cellular activities
PONIBJDO_00237 9.3e-242 S Putative metallopeptidase domain
PONIBJDO_00238 5.1e-47
PONIBJDO_00239 0.0 pepO 3.4.24.71 O Peptidase family M13
PONIBJDO_00240 8.4e-111 K Helix-turn-helix domain
PONIBJDO_00241 2.1e-88 ymdB S Macro domain protein
PONIBJDO_00242 1.6e-197 EGP Major facilitator Superfamily
PONIBJDO_00243 3.5e-285 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PONIBJDO_00244 3.8e-106 tra L Transposase and inactivated derivatives, IS30 family
PONIBJDO_00245 1.6e-21 K helix_turn_helix, mercury resistance
PONIBJDO_00246 1.7e-179 L PFAM Integrase catalytic region
PONIBJDO_00247 2.9e-168 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PONIBJDO_00248 4.1e-158 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PONIBJDO_00249 8.9e-173 L PFAM Integrase catalytic region
PONIBJDO_00250 3.1e-38 ysaB V FtsX-like permease family
PONIBJDO_00251 3.1e-81 ysaB V FtsX-like permease family
PONIBJDO_00252 3.1e-163 ysaB V FtsX-like permease family
PONIBJDO_00253 2.6e-135 macB2 V ABC transporter, ATP-binding protein
PONIBJDO_00254 1.3e-179 T PhoQ Sensor
PONIBJDO_00255 8.2e-94 K response regulator
PONIBJDO_00256 3.5e-157 ytbE 1.1.1.346 S Aldo keto reductase
PONIBJDO_00257 8.9e-136 pnuC H nicotinamide mononucleotide transporter
PONIBJDO_00258 7.5e-83 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PONIBJDO_00259 2.3e-204
PONIBJDO_00260 2.6e-52
PONIBJDO_00261 9.1e-36
PONIBJDO_00262 4.8e-93 yxkA S Phosphatidylethanolamine-binding protein
PONIBJDO_00263 4e-147 ptp3 3.1.3.48 T Tyrosine phosphatase family
PONIBJDO_00264 8.6e-184 celE 3.2.1.4 GH5,GH9 E GDSL-like Lipase/Acylhydrolase family
PONIBJDO_00265 1.9e-225 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PONIBJDO_00266 7.6e-285 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PONIBJDO_00267 2e-180 galR K Transcriptional regulator
PONIBJDO_00268 9.5e-96 dedA 3.1.3.1 S SNARE associated Golgi protein
PONIBJDO_00269 3.7e-230 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PONIBJDO_00270 2e-169 L Transposase and inactivated derivatives IS30 family
PONIBJDO_00271 1.8e-78 K AsnC family
PONIBJDO_00272 1.6e-79 uspA T universal stress protein
PONIBJDO_00273 2.3e-44 ltrA S Bacterial low temperature requirement A protein (LtrA)
PONIBJDO_00274 3.7e-56 ltrA S Bacterial low temperature requirement A protein (LtrA)
PONIBJDO_00275 1.1e-59 L PFAM transposase IS200-family protein
PONIBJDO_00276 2.4e-228 L transposase, IS605 OrfB family
PONIBJDO_00277 0.0 lacS G Transporter
PONIBJDO_00278 1.1e-167 L Transposase and inactivated derivatives IS30 family
PONIBJDO_00279 5.5e-28
PONIBJDO_00280 3.2e-275 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PONIBJDO_00281 2.2e-287 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PONIBJDO_00282 3.2e-190 yeaN P Transporter, major facilitator family protein
PONIBJDO_00283 3.2e-74 S 3-demethylubiquinone-9 3-methyltransferase
PONIBJDO_00284 9.9e-85 nrdI F Belongs to the NrdI family
PONIBJDO_00285 6.2e-241 yhdP S Transporter associated domain
PONIBJDO_00286 1.7e-154 ypdB V (ABC) transporter
PONIBJDO_00287 4.1e-87 GM epimerase
PONIBJDO_00288 3.6e-91 M1-874 K Domain of unknown function (DUF1836)
PONIBJDO_00289 2.3e-78 yybA 2.3.1.57 K Transcriptional regulator
PONIBJDO_00290 4.2e-135 XK27_07210 6.1.1.6 S B3 4 domain
PONIBJDO_00291 2.8e-170 S AI-2E family transporter
PONIBJDO_00292 3.5e-154 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
PONIBJDO_00293 2.3e-162
PONIBJDO_00294 4.1e-71 L PFAM Integrase catalytic region
PONIBJDO_00295 1.2e-28 L PFAM Integrase catalytic region
PONIBJDO_00296 3.1e-31 L PFAM Integrase catalytic region
PONIBJDO_00297 5.4e-135 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PONIBJDO_00298 3.7e-190 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PONIBJDO_00299 1.1e-309 lmrA V ABC transporter, ATP-binding protein
PONIBJDO_00300 0.0 yfiC V ABC transporter
PONIBJDO_00301 1.1e-283 pipD E Dipeptidase
PONIBJDO_00302 1.3e-87 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PONIBJDO_00303 2.3e-133 gntR K UbiC transcription regulator-associated domain protein
PONIBJDO_00304 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PONIBJDO_00305 1.4e-243 yagE E amino acid
PONIBJDO_00306 1.6e-137 aroD S Serine hydrolase (FSH1)
PONIBJDO_00307 1.2e-239 brnQ U Component of the transport system for branched-chain amino acids
PONIBJDO_00308 8.9e-167 GK ROK family
PONIBJDO_00309 0.0 tetP J elongation factor G
PONIBJDO_00310 1.5e-80 uspA T universal stress protein
PONIBJDO_00311 1.1e-194 lplA 6.3.1.20 H Lipoate-protein ligase
PONIBJDO_00312 7.1e-63
PONIBJDO_00313 5.2e-14
PONIBJDO_00314 1.4e-212 EGP Major facilitator Superfamily
PONIBJDO_00315 2.9e-257 G PTS system Galactitol-specific IIC component
PONIBJDO_00316 2.6e-180 1.6.5.5 C Zinc-binding dehydrogenase
PONIBJDO_00317 1.1e-161
PONIBJDO_00318 1e-72 K Transcriptional regulator
PONIBJDO_00319 3.7e-190 D Alpha beta
PONIBJDO_00320 2.2e-52 ypaA S Protein of unknown function (DUF1304)
PONIBJDO_00321 0.0 yjcE P Sodium proton antiporter
PONIBJDO_00322 1.6e-52 yvlA
PONIBJDO_00323 1.8e-113 P Cobalt transport protein
PONIBJDO_00324 1e-246 cbiO1 S ABC transporter, ATP-binding protein
PONIBJDO_00325 3e-96 S ABC-type cobalt transport system, permease component
PONIBJDO_00326 3.3e-133 S membrane transporter protein
PONIBJDO_00327 2.5e-138 IQ KR domain
PONIBJDO_00328 3.6e-182 iunH2 3.2.2.1 F nucleoside hydrolase
PONIBJDO_00329 8.3e-182 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
PONIBJDO_00330 3.3e-149 L hmm pf00665
PONIBJDO_00331 2.7e-126 L Helix-turn-helix domain
PONIBJDO_00332 5.1e-49 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PONIBJDO_00333 2.7e-117 gph 3.1.3.18 S HAD hydrolase, family IA, variant
PONIBJDO_00334 2.3e-243 yagE E amino acid
PONIBJDO_00335 3.4e-85 dps P Belongs to the Dps family
PONIBJDO_00336 0.0 pacL 3.6.3.8 P P-type ATPase
PONIBJDO_00337 1.1e-177 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
PONIBJDO_00338 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PONIBJDO_00339 2e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PONIBJDO_00340 4.5e-146 potB P ABC transporter permease
PONIBJDO_00341 1.9e-139 potC P ABC transporter permease
PONIBJDO_00342 4.3e-208 potD P ABC transporter
PONIBJDO_00343 1.8e-229
PONIBJDO_00344 7.2e-234 EGP Sugar (and other) transporter
PONIBJDO_00345 6e-255 yfnA E Amino Acid
PONIBJDO_00346 1.2e-73 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
PONIBJDO_00347 1.9e-101 gmk2 2.7.4.8 F Guanylate kinase
PONIBJDO_00348 1.5e-82 zur P Belongs to the Fur family
PONIBJDO_00349 4e-17 3.2.1.14 GH18
PONIBJDO_00350 7.1e-150
PONIBJDO_00351 5.8e-39 pspC KT PspC domain protein
PONIBJDO_00352 1.6e-94 K Transcriptional regulator (TetR family)
PONIBJDO_00353 1.3e-219 V domain protein
PONIBJDO_00354 7.6e-183 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PONIBJDO_00356 6.6e-35 S Transglycosylase associated protein
PONIBJDO_00357 7.5e-228 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PONIBJDO_00358 4.2e-126 3.1.3.73 G phosphoglycerate mutase
PONIBJDO_00359 1.2e-115 dedA S SNARE associated Golgi protein
PONIBJDO_00360 0.0 helD 3.6.4.12 L DNA helicase
PONIBJDO_00361 2.8e-36 Q pyridine nucleotide-disulphide oxidoreductase
PONIBJDO_00362 4.7e-157 EG EamA-like transporter family
PONIBJDO_00363 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PONIBJDO_00364 4.8e-176 coaA 2.7.1.33 F Pantothenic acid kinase
PONIBJDO_00365 1.5e-225 S cog cog1373
PONIBJDO_00367 8.7e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PONIBJDO_00368 4.9e-224 oxlT P Major Facilitator Superfamily
PONIBJDO_00369 1.1e-158 spoU 2.1.1.185 J Methyltransferase
PONIBJDO_00370 2.8e-24
PONIBJDO_00372 5.3e-132 L PFAM Integrase catalytic region
PONIBJDO_00373 3.5e-114 S Membrane
PONIBJDO_00374 1.2e-123 O Zinc-dependent metalloprotease
PONIBJDO_00375 2.6e-88 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PONIBJDO_00376 8e-157 metQ_4 P Belongs to the nlpA lipoprotein family
PONIBJDO_00378 3.9e-122 L hmm pf00665
PONIBJDO_00379 2.4e-76 L Helix-turn-helix domain
PONIBJDO_00380 2.4e-182 S Phosphotransferase system, EIIC
PONIBJDO_00381 7.1e-98 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PONIBJDO_00382 1.6e-182 L PFAM Integrase catalytic region
PONIBJDO_00383 1.5e-132 K Transcriptional regulatory protein, C-terminal domain protein
PONIBJDO_00384 8.6e-159 pstS P Phosphate
PONIBJDO_00385 2.8e-152 pstC P probably responsible for the translocation of the substrate across the membrane
PONIBJDO_00386 5.5e-153 pstA P Phosphate transport system permease protein PstA
PONIBJDO_00387 8.9e-136 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PONIBJDO_00388 1.9e-124 phoU P Plays a role in the regulation of phosphate uptake
PONIBJDO_00389 2.4e-145
PONIBJDO_00391 4.4e-118 ydaM M Glycosyl transferase
PONIBJDO_00392 5.3e-59 L PFAM transposase IS200-family protein
PONIBJDO_00393 4.5e-227 L transposase, IS605 OrfB family
PONIBJDO_00394 7.1e-101 ydaM M Glycosyl transferase family group 2
PONIBJDO_00395 3.4e-224 G Glycosyl hydrolases family 8
PONIBJDO_00396 6.8e-116 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PONIBJDO_00397 1.3e-168 L Transposase and inactivated derivatives IS30 family
PONIBJDO_00398 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
PONIBJDO_00399 6.5e-238 ktrB P Potassium uptake protein
PONIBJDO_00400 5.3e-116 ktrA P domain protein
PONIBJDO_00401 3.2e-79 Q Methyltransferase
PONIBJDO_00402 1e-232 mntH P H( )-stimulated, divalent metal cation uptake system
PONIBJDO_00403 6.2e-179 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
PONIBJDO_00404 1e-170 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PONIBJDO_00405 1.9e-95 S NADPH-dependent FMN reductase
PONIBJDO_00406 1.8e-179 MA20_14895 S Conserved hypothetical protein 698
PONIBJDO_00407 2.7e-134 I alpha/beta hydrolase fold
PONIBJDO_00408 4.1e-169 lsa S ABC transporter
PONIBJDO_00409 2.1e-260 S Uncharacterised protein family (UPF0236)
PONIBJDO_00410 6.4e-179 yfeX P Peroxidase
PONIBJDO_00411 2.2e-274 arcD S C4-dicarboxylate anaerobic carrier
PONIBJDO_00412 2.6e-255 ytjP 3.5.1.18 E Dipeptidase
PONIBJDO_00413 5.3e-215 uhpT EGP Major facilitator Superfamily
PONIBJDO_00414 1.7e-284 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
PONIBJDO_00415 7e-131 ponA V Beta-lactamase enzyme family
PONIBJDO_00416 6.1e-125 L PFAM Integrase catalytic region
PONIBJDO_00417 1.8e-40 L PFAM Integrase catalytic region
PONIBJDO_00418 4.8e-227 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PONIBJDO_00419 3e-75
PONIBJDO_00420 3.2e-200 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PONIBJDO_00421 1.5e-25
PONIBJDO_00422 7.1e-264 S Uncharacterized protein conserved in bacteria (DUF2252)
PONIBJDO_00423 1.6e-168 L transposase, IS605 OrfB family
PONIBJDO_00424 9.4e-295 L PFAM plasmid pRiA4b ORF-3 family protein
PONIBJDO_00425 1.1e-205 adhA 1.1.1.1 C Zinc-binding alcohol dehydrogenase family protein
PONIBJDO_00426 6.6e-110 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PONIBJDO_00427 1.3e-142 mleR K LysR family
PONIBJDO_00428 2e-169 L Transposase and inactivated derivatives IS30 family
PONIBJDO_00429 2.2e-304 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
PONIBJDO_00430 4.7e-260 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PONIBJDO_00431 1.8e-267 frdC 1.3.5.4 C FAD binding domain
PONIBJDO_00432 2.5e-132 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PONIBJDO_00433 1e-164 citP P Sodium:sulfate symporter transmembrane region
PONIBJDO_00434 2.3e-125 citR K sugar-binding domain protein
PONIBJDO_00435 4.2e-177 mez_1 1.1.1.38 C Malic enzyme, NAD binding domain
PONIBJDO_00436 2.2e-148 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PONIBJDO_00437 1.2e-40 citD C Covalent carrier of the coenzyme of citrate lyase
PONIBJDO_00438 3.6e-160 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
PONIBJDO_00439 1e-271 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
PONIBJDO_00440 1.9e-147 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PONIBJDO_00441 8.5e-113 ydjP I Alpha/beta hydrolase family
PONIBJDO_00442 3e-159 mleR K LysR family
PONIBJDO_00443 3.1e-251 yjjP S Putative threonine/serine exporter
PONIBJDO_00444 1.6e-117 ung2 3.2.2.27 L Uracil-DNA glycosylase
PONIBJDO_00445 1.6e-280 emrY EGP Major facilitator Superfamily
PONIBJDO_00446 1.7e-187 I Alpha beta
PONIBJDO_00447 2.6e-103 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
PONIBJDO_00448 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PONIBJDO_00450 3.5e-160 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PONIBJDO_00451 9.5e-119 S Domain of unknown function (DUF4811)
PONIBJDO_00452 2.7e-269 lmrB EGP Major facilitator Superfamily
PONIBJDO_00453 4.9e-73 merR K MerR HTH family regulatory protein
PONIBJDO_00454 3.6e-55
PONIBJDO_00455 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PONIBJDO_00456 1.1e-217 S CAAX protease self-immunity
PONIBJDO_00457 1.4e-108 glnP P ABC transporter permease
PONIBJDO_00458 4.2e-110 gluC P ABC transporter permease
PONIBJDO_00459 7.5e-152 glnH ET ABC transporter
PONIBJDO_00460 5.3e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PONIBJDO_00461 5.5e-83 usp1 T Belongs to the universal stress protein A family
PONIBJDO_00462 7.6e-110 S VIT family
PONIBJDO_00463 5e-117 S membrane
PONIBJDO_00464 2.6e-166 czcD P cation diffusion facilitator family transporter
PONIBJDO_00465 1.1e-124 sirR K iron dependent repressor
PONIBJDO_00466 3.5e-31 cspC K Cold shock protein
PONIBJDO_00467 3.6e-129 thrE S Putative threonine/serine exporter
PONIBJDO_00468 1.1e-80 S Threonine/Serine exporter, ThrE
PONIBJDO_00469 2.7e-120 lssY 3.6.1.27 I phosphatase
PONIBJDO_00470 3.5e-10 2.3.1.128 J Acetyltransferase (GNAT) domain
PONIBJDO_00471 1.5e-275 lysP E amino acid
PONIBJDO_00472 4.3e-115 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PONIBJDO_00478 1.2e-129 S Hydrolases of the alpha beta superfamily
PONIBJDO_00479 1.3e-16 S Hydrolases of the alpha beta superfamily
PONIBJDO_00480 1.2e-196 adhP 1.1.1.1 C alcohol dehydrogenase
PONIBJDO_00481 4.4e-77 ctsR K Belongs to the CtsR family
PONIBJDO_00482 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PONIBJDO_00483 1e-110 K Bacterial regulatory proteins, tetR family
PONIBJDO_00484 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PONIBJDO_00485 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PONIBJDO_00486 2.2e-202 ykiI
PONIBJDO_00487 1.5e-118 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
PONIBJDO_00488 3.9e-72 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PONIBJDO_00489 2.4e-83 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PONIBJDO_00490 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PONIBJDO_00491 3.8e-235 L Transposase
PONIBJDO_00492 3.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PONIBJDO_00493 1.5e-118 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PONIBJDO_00494 5.5e-107 rplD J Forms part of the polypeptide exit tunnel
PONIBJDO_00495 5.7e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PONIBJDO_00496 4.2e-150 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PONIBJDO_00497 1.4e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PONIBJDO_00498 4.8e-52 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PONIBJDO_00499 6.1e-112 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PONIBJDO_00500 3.5e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PONIBJDO_00501 8.4e-28 rpmC J Belongs to the universal ribosomal protein uL29 family
PONIBJDO_00502 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PONIBJDO_00503 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PONIBJDO_00504 2.6e-49 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PONIBJDO_00505 1.4e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PONIBJDO_00506 4e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PONIBJDO_00507 1.3e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PONIBJDO_00508 3.2e-95 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PONIBJDO_00509 6.6e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PONIBJDO_00510 6.3e-85 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PONIBJDO_00511 2.9e-24 rpmD J Ribosomal protein L30
PONIBJDO_00512 8.9e-64 rplO J Binds to the 23S rRNA
PONIBJDO_00513 8.8e-240 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PONIBJDO_00514 6.8e-124 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PONIBJDO_00515 5.9e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PONIBJDO_00516 1.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PONIBJDO_00517 4.7e-58 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PONIBJDO_00518 2.3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PONIBJDO_00519 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PONIBJDO_00520 1.1e-62 rplQ J Ribosomal protein L17
PONIBJDO_00521 3e-145 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PONIBJDO_00522 7.8e-152 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PONIBJDO_00523 5.7e-141 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PONIBJDO_00524 1.9e-141 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PONIBJDO_00525 4.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PONIBJDO_00526 5.6e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
PONIBJDO_00527 3.6e-140 IQ reductase
PONIBJDO_00528 3.6e-114 acmC 3.2.1.96 NU mannosyl-glycoprotein
PONIBJDO_00529 3e-99 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PONIBJDO_00530 3.3e-211 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PONIBJDO_00531 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PONIBJDO_00532 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PONIBJDO_00533 2.1e-202 camS S sex pheromone
PONIBJDO_00534 2.4e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PONIBJDO_00535 1e-276 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PONIBJDO_00536 1.8e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PONIBJDO_00537 5.1e-187 yegS 2.7.1.107 G Lipid kinase
PONIBJDO_00538 2.8e-260 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PONIBJDO_00539 1.3e-16
PONIBJDO_00542 6.4e-234 mod 2.1.1.72, 3.1.21.5 L DNA methylase
PONIBJDO_00543 0.0 res 2.1.1.72, 3.1.21.5 L Type III restriction enzyme, res subunit
PONIBJDO_00544 2.1e-217 K DNA binding
PONIBJDO_00545 0.0 L helicase activity
PONIBJDO_00547 1.8e-55 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PONIBJDO_00548 2.7e-19
PONIBJDO_00549 2.2e-184 L PFAM Integrase catalytic region
PONIBJDO_00550 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
PONIBJDO_00551 7.9e-35 copZ C Heavy-metal-associated domain
PONIBJDO_00552 6.7e-93 dps P Belongs to the Dps family
PONIBJDO_00553 5.8e-112 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
PONIBJDO_00554 5.6e-261 S Uncharacterised protein family (UPF0236)
PONIBJDO_00555 9.5e-29 L PFAM Integrase catalytic region
PONIBJDO_00556 9.8e-53 L PFAM Integrase catalytic region
PONIBJDO_00557 2.7e-26 K TRANSCRIPTIONal
PONIBJDO_00559 2.2e-36 pldB 3.1.1.5 I Serine aminopeptidase, S33
PONIBJDO_00560 7.1e-15 pldB 3.1.1.5 I Serine aminopeptidase, S33
PONIBJDO_00561 5.6e-79 pncA Q Isochorismatase family
PONIBJDO_00562 4e-230 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PONIBJDO_00563 4.2e-111 3.6.1.13, 3.6.1.55 F NUDIX domain
PONIBJDO_00564 4e-141 L PFAM Integrase catalytic region
PONIBJDO_00565 3.2e-96 S PFAM Archaeal ATPase
PONIBJDO_00566 1.3e-46
PONIBJDO_00568 1.9e-37 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PONIBJDO_00569 1.9e-07 asnB 6.3.5.4 E Protein of unknown function (DUF3923)
PONIBJDO_00570 2.5e-164 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PONIBJDO_00571 1.2e-149 amtB P ammonium transporter
PONIBJDO_00572 2.1e-249 gor 1.8.1.7 C pyridine nucleotide-disulfide oxidoreductase
PONIBJDO_00573 1.4e-90 S B3 4 domain
PONIBJDO_00574 2.1e-91
PONIBJDO_00575 3.8e-47 pnb C nitroreductase
PONIBJDO_00576 1.2e-52 pnb C nitroreductase
PONIBJDO_00577 2e-74 ogt 2.1.1.63 L Methyltransferase
PONIBJDO_00578 3.2e-171 XK27_00915 C Luciferase-like monooxygenase
PONIBJDO_00579 2e-153 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
PONIBJDO_00580 1.2e-68 S Protein of unknown function (DUF3021)
PONIBJDO_00581 6.4e-78 K LytTr DNA-binding domain
PONIBJDO_00582 9.1e-92 K Acetyltransferase (GNAT) family
PONIBJDO_00583 3.1e-21
PONIBJDO_00584 1.1e-119 ybhL S Belongs to the BI1 family
PONIBJDO_00585 6.5e-81 yjcF 3.5.4.33, 4.4.1.8 K protein acetylation
PONIBJDO_00586 9.3e-197 S Protein of unknown function (DUF3114)
PONIBJDO_00587 3.7e-298 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
PONIBJDO_00588 1.3e-165 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PONIBJDO_00589 3.3e-106 yvdD 3.2.2.10 S Belongs to the LOG family
PONIBJDO_00590 9.1e-62 S Domain of unknown function (DUF4828)
PONIBJDO_00591 4.5e-191 mocA S Oxidoreductase
PONIBJDO_00592 8.5e-227 yfmL L DEAD DEAH box helicase
PONIBJDO_00594 2.6e-208 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PONIBJDO_00595 9.3e-56
PONIBJDO_00596 2.3e-67 gtcA S Teichoic acid glycosylation protein
PONIBJDO_00597 6.1e-79 fld C Flavodoxin
PONIBJDO_00598 1.7e-167 map 3.4.11.18 E Methionine Aminopeptidase
PONIBJDO_00599 8.6e-220 arcT 2.6.1.1 E Aminotransferase
PONIBJDO_00600 6.1e-255 E Arginine ornithine antiporter
PONIBJDO_00601 4.1e-281 yjeM E Amino Acid
PONIBJDO_00602 3.2e-153 yihY S Belongs to the UPF0761 family
PONIBJDO_00603 6.6e-34 S Protein of unknown function (DUF2922)
PONIBJDO_00604 4.9e-31
PONIBJDO_00605 7.4e-125 recX 2.4.1.337 GT4 S Regulatory protein RecX
PONIBJDO_00606 2.1e-145 cps1D M Domain of unknown function (DUF4422)
PONIBJDO_00607 2.4e-175 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
PONIBJDO_00608 5e-119 rfbP 2.7.8.6 M Bacterial sugar transferase
PONIBJDO_00609 0.0 2.7.7.6 M Peptidase family M23
PONIBJDO_00610 0.0 G Peptidase_C39 like family
PONIBJDO_00611 2.1e-25
PONIBJDO_00612 0.0 ganB 3.2.1.89 G arabinogalactan
PONIBJDO_00613 3.6e-218 glf 5.4.99.9 M UDP-galactopyranose mutase
PONIBJDO_00614 2.3e-209 rfbX S Membrane protein involved in the export of O-antigen and teichoic acid
PONIBJDO_00615 1.4e-75 M transferase activity, transferring glycosyl groups
PONIBJDO_00616 1.3e-88 cps3F
PONIBJDO_00617 6.6e-28 M biosynthesis protein
PONIBJDO_00618 2e-76 rgpB GT2 M Glycosyl transferase family 2
PONIBJDO_00619 3.4e-66 S Glycosyltransferase like family
PONIBJDO_00620 3.7e-80 glfT1 1.1.1.133 S Glycosyltransferase like family 2
PONIBJDO_00621 5.3e-73 S Acyltransferase family
PONIBJDO_00622 2.8e-35
PONIBJDO_00623 7.1e-72 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PONIBJDO_00624 2.6e-164 ykoT GT2 M Glycosyl transferase family 2
PONIBJDO_00625 4.2e-63 S integral membrane protein
PONIBJDO_00626 0.0 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PONIBJDO_00627 1.7e-162 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PONIBJDO_00628 2.7e-108 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
PONIBJDO_00629 2.5e-197 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PONIBJDO_00630 1.6e-157 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PONIBJDO_00631 0.0 csd1 3.5.1.28 G domain, Protein
PONIBJDO_00632 1.1e-163 yueF S AI-2E family transporter
PONIBJDO_00633 1.6e-229 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PONIBJDO_00634 1.3e-309 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PONIBJDO_00635 4.7e-190 L PFAM Integrase catalytic region
PONIBJDO_00636 9.3e-65 gntR1 K Transcriptional regulator, GntR family
PONIBJDO_00637 1.8e-156 V ABC transporter, ATP-binding protein
PONIBJDO_00638 6.7e-114
PONIBJDO_00639 8e-142 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G MucBP domain
PONIBJDO_00640 2.4e-99 S Pfam:DUF3816
PONIBJDO_00641 0.0 clpE O Belongs to the ClpA ClpB family
PONIBJDO_00642 2.9e-27
PONIBJDO_00643 2.7e-39 ptsH G phosphocarrier protein HPR
PONIBJDO_00644 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PONIBJDO_00645 1.4e-226 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
PONIBJDO_00646 7.2e-197 cpoA GT4 M Glycosyltransferase, group 1 family protein
PONIBJDO_00647 2.5e-178 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PONIBJDO_00648 1.5e-39 ykuJ S Protein of unknown function (DUF1797)
PONIBJDO_00660 3.5e-97 2.3.1.128 K Acetyltransferase (GNAT) domain
PONIBJDO_00661 1.5e-237 lmrB EGP Major facilitator Superfamily
PONIBJDO_00662 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PONIBJDO_00663 2e-111 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PONIBJDO_00664 7.5e-150 sufD O Uncharacterized protein family (UPF0051)
PONIBJDO_00665 1.7e-79 lytE M LysM domain protein
PONIBJDO_00666 0.0 oppD EP Psort location Cytoplasmic, score
PONIBJDO_00667 2.3e-93 lytE M LysM domain protein
PONIBJDO_00668 6e-148 xth 3.1.11.2 L exodeoxyribonuclease III
PONIBJDO_00669 6.9e-167 preT 1.3.1.1 E Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
PONIBJDO_00670 1.2e-236 preA 1.3.1.1 C 4Fe-4S dicluster domain
PONIBJDO_00671 3.1e-153 yeaE S Aldo keto
PONIBJDO_00672 2.4e-77 hsp O Belongs to the small heat shock protein (HSP20) family
PONIBJDO_00673 2.8e-282 dinB 2.7.7.7 L impB/mucB/samB family C-terminal domain
PONIBJDO_00674 6.5e-78 S Psort location Cytoplasmic, score
PONIBJDO_00675 7.7e-86 S Short repeat of unknown function (DUF308)
PONIBJDO_00676 1e-23
PONIBJDO_00677 2.8e-102 V VanZ like family
PONIBJDO_00678 4.8e-233 cycA E Amino acid permease
PONIBJDO_00679 4.3e-85 perR P Belongs to the Fur family
PONIBJDO_00680 1.5e-253 EGP Major facilitator Superfamily
PONIBJDO_00681 1.4e-91 tag 3.2.2.20 L glycosylase
PONIBJDO_00682 5.6e-217 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PONIBJDO_00683 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PONIBJDO_00684 4.9e-41
PONIBJDO_00685 4.1e-303 ytgP S Polysaccharide biosynthesis protein
PONIBJDO_00686 2.5e-150 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PONIBJDO_00687 5.6e-277 pepV 3.5.1.18 E dipeptidase PepV
PONIBJDO_00688 1.2e-85 uspA T Belongs to the universal stress protein A family
PONIBJDO_00689 1.4e-176 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PONIBJDO_00690 5e-116 dck 2.7.1.74 F deoxynucleoside kinase
PONIBJDO_00691 3.8e-113
PONIBJDO_00692 1.6e-185 rbsR K Periplasmic binding proteins and sugar binding domain of LacI family
PONIBJDO_00693 4.4e-161 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PONIBJDO_00694 2.1e-32
PONIBJDO_00695 4.5e-112 S CAAX protease self-immunity
PONIBJDO_00696 1.6e-42
PONIBJDO_00698 2.2e-54 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PONIBJDO_00699 5.2e-87 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
PONIBJDO_00700 1.1e-104 folE 2.7.6.3, 3.5.4.16 F GTP cyclohydrolase 1
PONIBJDO_00701 4.5e-225 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PONIBJDO_00702 2.8e-105 xtp 2.5.1.15, 3.6.1.66 F Ham1 family
PONIBJDO_00703 9.3e-217 folP 2.5.1.15 H dihydropteroate synthase
PONIBJDO_00704 1.8e-43
PONIBJDO_00705 1.2e-32
PONIBJDO_00707 1e-165 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PONIBJDO_00708 7.3e-152 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PONIBJDO_00709 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PONIBJDO_00710 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PONIBJDO_00711 3.5e-40 yheA S Belongs to the UPF0342 family
PONIBJDO_00712 1.8e-220 yhaO L Ser Thr phosphatase family protein
PONIBJDO_00713 0.0 L AAA domain
PONIBJDO_00714 3.4e-129 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PONIBJDO_00716 1.2e-76 hit FG histidine triad
PONIBJDO_00717 3.9e-136 ecsA V ABC transporter, ATP-binding protein
PONIBJDO_00718 5.1e-218 ecsB U ABC transporter
PONIBJDO_00719 1.1e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PONIBJDO_00720 7.7e-27 S YSIRK type signal peptide
PONIBJDO_00721 2.5e-35 2.1.1.72, 3.1.21.3 AA10,CBM73 L Belongs to the N(4) N(6)-methyltransferase family
PONIBJDO_00722 6.9e-254 2.1.1.72, 3.1.21.3 AA10,CBM73 L Belongs to the N(4) N(6)-methyltransferase family
PONIBJDO_00723 1.3e-143 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
PONIBJDO_00724 1.2e-100 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
PONIBJDO_00725 3.3e-183 iolS C Aldo keto reductase
PONIBJDO_00726 9.1e-167 glsA 3.5.1.2 E Belongs to the glutaminase family
PONIBJDO_00727 7.5e-58 ytzB S Small secreted protein
PONIBJDO_00728 1.7e-56 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PONIBJDO_00729 2.5e-118 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PONIBJDO_00730 7e-48 yafQ S Bacterial toxin of type II toxin-antitoxin system, YafQ
PONIBJDO_00731 1.3e-21 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PONIBJDO_00732 1.9e-250 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PONIBJDO_00733 1.9e-119 ybhL S Belongs to the BI1 family
PONIBJDO_00734 2e-115 yoaK S Protein of unknown function (DUF1275)
PONIBJDO_00735 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PONIBJDO_00736 4.1e-158 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PONIBJDO_00737 3.2e-99 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PONIBJDO_00738 1.1e-80 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PONIBJDO_00739 1.4e-203 dnaB L replication initiation and membrane attachment
PONIBJDO_00740 1.1e-170 dnaI L Primosomal protein DnaI
PONIBJDO_00741 3.7e-85 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PONIBJDO_00742 2.3e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PONIBJDO_00743 1.6e-55 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PONIBJDO_00744 1.8e-95 yqeG S HAD phosphatase, family IIIA
PONIBJDO_00745 2.1e-218 yqeH S Ribosome biogenesis GTPase YqeH
PONIBJDO_00746 1.9e-47 yhbY J RNA-binding protein
PONIBJDO_00747 4e-121 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PONIBJDO_00748 1e-113 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PONIBJDO_00749 4.9e-60 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PONIBJDO_00750 1.7e-139 yqeM Q Methyltransferase
PONIBJDO_00751 7.9e-213 ylbM S Belongs to the UPF0348 family
PONIBJDO_00752 2.9e-99 yceD S Uncharacterized ACR, COG1399
PONIBJDO_00753 1.1e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PONIBJDO_00754 1.5e-121 K response regulator
PONIBJDO_00755 4.1e-278 arlS 2.7.13.3 T Histidine kinase
PONIBJDO_00756 7.4e-267 yjeM E Amino Acid
PONIBJDO_00757 4.4e-231 V MatE
PONIBJDO_00758 8.7e-69 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PONIBJDO_00759 5.9e-169 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PONIBJDO_00760 7e-46 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PONIBJDO_00761 3.1e-144 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PONIBJDO_00762 3.1e-92 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
PONIBJDO_00763 2e-58 yodB K Transcriptional regulator, HxlR family
PONIBJDO_00764 6.6e-198 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PONIBJDO_00765 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PONIBJDO_00766 5.6e-115 rlpA M PFAM NLP P60 protein
PONIBJDO_00767 3.3e-118 udk 2.7.1.48 F Cytidine monophosphokinase
PONIBJDO_00768 1.4e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PONIBJDO_00769 4.2e-71 L PFAM transposase IS200-family protein
PONIBJDO_00770 8.8e-71 yneR S Belongs to the HesB IscA family
PONIBJDO_00771 0.0 S membrane
PONIBJDO_00772 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
PONIBJDO_00773 4.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PONIBJDO_00774 2.6e-100 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PONIBJDO_00775 3.4e-12 gluP 3.4.21.105 S Peptidase, S54 family
PONIBJDO_00776 3.8e-46 gluP 3.4.21.105 S Peptidase, S54 family
PONIBJDO_00777 7.4e-36 yqgQ S Bacterial protein of unknown function (DUF910)
PONIBJDO_00778 5.6e-183 glk 2.7.1.2 G Glucokinase
PONIBJDO_00779 3.4e-67 yqhL P Rhodanese-like protein
PONIBJDO_00780 5.9e-22 S Protein of unknown function (DUF3042)
PONIBJDO_00781 3.3e-177 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PONIBJDO_00782 2.4e-261 glnA 6.3.1.2 E glutamine synthetase
PONIBJDO_00783 3.8e-295 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PONIBJDO_00784 4.8e-221 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
PONIBJDO_00785 3.9e-12
PONIBJDO_00786 3.1e-153 P Belongs to the nlpA lipoprotein family
PONIBJDO_00787 1.4e-100 msrA 1.8.4.11, 1.8.4.12 C Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PONIBJDO_00788 3.7e-51 S Iron-sulfur cluster assembly protein
PONIBJDO_00789 1e-151
PONIBJDO_00790 9.5e-173
PONIBJDO_00791 2.5e-89 dut S Protein conserved in bacteria
PONIBJDO_00795 8.3e-111 K Transcriptional regulator
PONIBJDO_00796 5.2e-50 rplU J This protein binds to 23S rRNA in the presence of protein L20
PONIBJDO_00797 1.6e-54 ysxB J Cysteine protease Prp
PONIBJDO_00798 2.1e-45 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PONIBJDO_00799 2.1e-131 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PONIBJDO_00800 7.8e-202 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PONIBJDO_00801 8.6e-114 J 2'-5' RNA ligase superfamily
PONIBJDO_00802 2.2e-70 yqhY S Asp23 family, cell envelope-related function
PONIBJDO_00803 1.2e-70 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PONIBJDO_00804 7.2e-150 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PONIBJDO_00805 5.3e-224 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PONIBJDO_00806 4.3e-43 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PONIBJDO_00807 1.7e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PONIBJDO_00808 1.1e-150 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PONIBJDO_00809 3.3e-77 argR K Regulates arginine biosynthesis genes
PONIBJDO_00810 1.9e-263 recN L May be involved in recombinational repair of damaged DNA
PONIBJDO_00811 1.7e-54
PONIBJDO_00812 4.2e-115 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
PONIBJDO_00813 7.7e-32 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PONIBJDO_00814 9.9e-214 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PONIBJDO_00815 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PONIBJDO_00816 4e-173 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PONIBJDO_00817 1.4e-248 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PONIBJDO_00818 2.9e-131 stp 3.1.3.16 T phosphatase
PONIBJDO_00819 0.0 KLT serine threonine protein kinase
PONIBJDO_00820 7.5e-166 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PONIBJDO_00821 1.5e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PONIBJDO_00822 1.8e-121 thiN 2.7.6.2 H thiamine pyrophosphokinase
PONIBJDO_00823 7e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PONIBJDO_00824 4.7e-58 asp S Asp23 family, cell envelope-related function
PONIBJDO_00825 7.1e-311 yloV S DAK2 domain fusion protein YloV
PONIBJDO_00826 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PONIBJDO_00827 6.1e-188 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PONIBJDO_00828 2.9e-38 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PONIBJDO_00829 4.2e-132 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PONIBJDO_00830 0.0 smc D Required for chromosome condensation and partitioning
PONIBJDO_00831 4.1e-180 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PONIBJDO_00832 1.3e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PONIBJDO_00833 5.1e-249 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PONIBJDO_00834 2.2e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PONIBJDO_00835 2e-39 ylqC S Belongs to the UPF0109 family
PONIBJDO_00836 6.9e-92 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PONIBJDO_00837 9.9e-143 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PONIBJDO_00838 9.9e-261 yfnA E amino acid
PONIBJDO_00839 3.6e-64 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PONIBJDO_00840 2.9e-34
PONIBJDO_00841 4.6e-52 S Mazg nucleotide pyrophosphohydrolase
PONIBJDO_00842 2.4e-158 xth 3.1.11.2 L exodeoxyribonuclease III
PONIBJDO_00843 9.5e-83
PONIBJDO_00844 2.2e-265 L PFAM Integrase catalytic region
PONIBJDO_00845 5.1e-176 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PONIBJDO_00846 1.9e-156 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PONIBJDO_00847 1.2e-129 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PONIBJDO_00848 9.1e-223 mdtG EGP Major facilitator Superfamily
PONIBJDO_00849 1.2e-165 T Calcineurin-like phosphoesterase superfamily domain
PONIBJDO_00850 7e-43 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PONIBJDO_00852 3e-119 sdaAB 4.3.1.17 E Serine dehydratase beta chain
PONIBJDO_00853 1.9e-137 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PONIBJDO_00854 1.2e-105 ahpC 1.11.1.15 O Peroxiredoxin
PONIBJDO_00855 0.0 trxB2 1.8.1.9 C Thioredoxin domain
PONIBJDO_00856 4e-182 M LPXTG-motif cell wall anchor domain protein
PONIBJDO_00857 0.0 M LPXTG-motif cell wall anchor domain protein
PONIBJDO_00859 3.3e-11 sraP UW this gene contains a nucleotide ambiguity which may be the result of a sequencing error
PONIBJDO_00860 2.6e-191 nss M transferase activity, transferring glycosyl groups
PONIBJDO_00861 2.8e-144 secY2 U Part of the accessory SecA2 SecY2 system specifically required for export of
PONIBJDO_00862 3.4e-195 M transferase activity, transferring glycosyl groups
PONIBJDO_00863 3.1e-217 asp2 3.4.11.5 S Accessory Sec system GspB-transporter
PONIBJDO_00864 4.5e-155 asp3 S Accessory Sec secretory system ASP3
PONIBJDO_00865 0.0 secA2 U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PONIBJDO_00866 1.1e-225 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
PONIBJDO_00867 2.3e-195 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
PONIBJDO_00870 2e-07 UW Hep Hag repeat protein
PONIBJDO_00871 1.2e-101 O Bacterial dnaA protein
PONIBJDO_00872 4.1e-215 L Integrase core domain
PONIBJDO_00873 7.4e-277 pipD E Dipeptidase
PONIBJDO_00874 0.0 yjbQ P TrkA C-terminal domain protein
PONIBJDO_00875 2.7e-25 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PONIBJDO_00876 6.2e-290 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PONIBJDO_00877 2.9e-82
PONIBJDO_00878 6.6e-37
PONIBJDO_00879 7.6e-103 K DNA-templated transcription, initiation
PONIBJDO_00880 6.1e-29
PONIBJDO_00881 9.6e-61 L PFAM transposase IS200-family protein
PONIBJDO_00882 7.2e-225 L transposase, IS605 OrfB family
PONIBJDO_00883 1.4e-41 K Transcriptional regulator, HxlR family
PONIBJDO_00884 1e-163 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PONIBJDO_00885 8.2e-141 epsB M biosynthesis protein
PONIBJDO_00886 1.7e-118 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PONIBJDO_00887 4.4e-137 cps2D 5.1.3.2 M RmlD substrate binding domain
PONIBJDO_00888 1.4e-89 tuaA M Bacterial sugar transferase
PONIBJDO_00889 2.1e-39 tuaG GT2 M Glycosyltransferase like family 2
PONIBJDO_00890 8.2e-60 M transferase activity, transferring glycosyl groups
PONIBJDO_00892 1.2e-28 S Glycosyltransferase like family 2
PONIBJDO_00893 2e-26 M Glycosyltransferase like family 2
PONIBJDO_00894 1.2e-37 M transferase activity, transferring glycosyl groups
PONIBJDO_00895 1.9e-116 epsI GM polysaccharide biosynthetic process
PONIBJDO_00896 8e-136 S Psort location CytoplasmicMembrane, score 9.99
PONIBJDO_00897 6.2e-190 L PFAM Integrase catalytic region
PONIBJDO_00898 3.8e-62 M Glycosyltransferase sugar-binding region containing DXD motif
PONIBJDO_00899 3.4e-169 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PONIBJDO_00901 5.4e-67 XK27_01125 L PFAM IS66 Orf2 family protein
PONIBJDO_00902 4.7e-293 L Transposase IS66 family
PONIBJDO_00903 1.8e-273 L Transposase IS66 family
PONIBJDO_00904 7.2e-96 L Helix-turn-helix domain
PONIBJDO_00905 9.6e-139 L hmm pf00665
PONIBJDO_00906 5.1e-139 L Bacterial dnaA protein
PONIBJDO_00907 1.2e-230 L Integrase core domain
PONIBJDO_00908 5.6e-53 XK27_01125 L PFAM IS66 Orf2 family protein
PONIBJDO_00910 2.4e-87 O Bacterial dnaA protein
PONIBJDO_00911 2e-56 S Uncharacterised protein family (UPF0236)
PONIBJDO_00912 5e-72 S Uncharacterised protein family (UPF0236)
PONIBJDO_00913 2.6e-36 S Uncharacterised protein family (UPF0236)
PONIBJDO_00914 5.4e-81 L Integrase core domain
PONIBJDO_00915 5.7e-72 L Integrase core domain
PONIBJDO_00916 8.7e-171 ganB 3.2.1.89 G arabinogalactan
PONIBJDO_00917 3.7e-87 ganB 3.2.1.89 G arabinogalactan
PONIBJDO_00918 2e-169 L Transposase and inactivated derivatives IS30 family
PONIBJDO_00919 3.8e-106 tra L Transposase and inactivated derivatives, IS30 family
PONIBJDO_00920 1.1e-30 L Transposase
PONIBJDO_00921 5.9e-48 L Transposase
PONIBJDO_00922 3.8e-42 L Transposase
PONIBJDO_00923 7.2e-236 L Integrase core domain
PONIBJDO_00924 1.1e-130 O Bacterial dnaA protein
PONIBJDO_00925 6.5e-163 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
PONIBJDO_00926 1.3e-273 2.4.1.5 GH13 G Glycosyl hydrolase family 70
PONIBJDO_00927 9.5e-172 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PONIBJDO_00928 2.5e-248 mmuP E amino acid
PONIBJDO_00930 2.1e-60 L PFAM transposase IS200-family protein
PONIBJDO_00931 9.8e-28 L transposase, IS605 OrfB family
PONIBJDO_00932 2.3e-181 L transposase, IS605 OrfB family
PONIBJDO_00933 3.5e-36 T Toxin-antitoxin system, toxin component, MazF family
PONIBJDO_00934 5.2e-37
PONIBJDO_00935 6.6e-07 D nuclear chromosome segregation
PONIBJDO_00936 0.0 snf 2.7.11.1 KL domain protein
PONIBJDO_00937 1.4e-144 ywqE 3.1.3.48 GM PHP domain protein
PONIBJDO_00938 6.8e-170 M Glycosyl hydrolases family 25
PONIBJDO_00939 8.4e-207 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PONIBJDO_00940 0.0 sbcC L Putative exonuclease SbcCD, C subunit
PONIBJDO_00941 4.2e-77 L PFAM Integrase catalytic region
PONIBJDO_00942 8.3e-84 L PFAM Integrase catalytic region
PONIBJDO_00943 1e-73
PONIBJDO_00944 3.5e-24
PONIBJDO_00946 3.8e-111 lssY 3.6.1.27 I Acid phosphatase homologues
PONIBJDO_00947 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PONIBJDO_00948 1.8e-226 clcA_2 P Chloride transporter, ClC family
PONIBJDO_00949 5.1e-116 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PONIBJDO_00950 5.1e-84 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PONIBJDO_00951 7.6e-46 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PONIBJDO_00952 2.1e-138 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PONIBJDO_00953 5.2e-50
PONIBJDO_00954 1.6e-206 S SEC-C Motif Domain Protein
PONIBJDO_00955 1.1e-105 tra L Transposase and inactivated derivatives, IS30 family
PONIBJDO_00956 1.1e-72
PONIBJDO_00957 5.7e-172
PONIBJDO_00958 5.3e-176 fecB P Periplasmic binding protein
PONIBJDO_00959 4.3e-261 L PFAM Integrase catalytic region
PONIBJDO_00960 9.2e-136 fecE 3.6.3.34 HP AAA domain, putative AbiEii toxin, Type IV TA system
PONIBJDO_00961 1.3e-128 fecD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PONIBJDO_00962 1.7e-78 S Flavodoxin
PONIBJDO_00963 3.7e-64 moaE 2.8.1.12 H MoaE protein
PONIBJDO_00964 4.9e-35 moaD 2.8.1.12 H ThiS family
PONIBJDO_00965 3.9e-218 narK P Transporter, major facilitator family protein
PONIBJDO_00966 2.9e-165 hepT 2.5.1.30, 2.5.1.90 H geranyltranstransferase activity
PONIBJDO_00967 3.6e-182
PONIBJDO_00968 1.6e-18
PONIBJDO_00969 2.3e-116 nreC K PFAM regulatory protein LuxR
PONIBJDO_00970 1e-190 comP 2.7.13.3 F Sensor histidine kinase
PONIBJDO_00971 3e-44
PONIBJDO_00972 2.3e-104 mobA 2.7.7.77 H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
PONIBJDO_00973 5.1e-84 mobB 2.10.1.1, 2.7.7.77 H molybdopterin-guanine dinucleotide biosynthesis protein
PONIBJDO_00974 8.5e-229 moeA 2.10.1.1 H MoeA N-terminal region (domain I and II)
PONIBJDO_00975 5.8e-83 moaB 2.7.7.75 H May be involved in the biosynthesis of molybdopterin
PONIBJDO_00976 1.7e-185 moeB 2.7.7.73, 2.7.7.80 H ThiF family
PONIBJDO_00977 0.0 narG 1.7.5.1 C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PONIBJDO_00978 0.0 narH 1.7.5.1 C 4Fe-4S dicluster domain
PONIBJDO_00979 6.9e-96 narJ C nitrate reductase molybdenum cofactor assembly chaperone
PONIBJDO_00980 7.6e-126 narI 1.7.5.1 C Nitrate reductase
PONIBJDO_00981 1.4e-164 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PONIBJDO_00982 5.5e-153 EG EamA-like transporter family
PONIBJDO_00983 9.4e-118 L Integrase
PONIBJDO_00984 1.2e-157 rssA S Phospholipase, patatin family
PONIBJDO_00985 4.9e-241 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
PONIBJDO_00986 3.9e-201 xerS L Belongs to the 'phage' integrase family
PONIBJDO_00988 6.6e-72 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PONIBJDO_00989 4.2e-77 marR K Transcriptional regulator, MarR family
PONIBJDO_00990 3e-176 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PONIBJDO_00991 7.2e-34 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PONIBJDO_00992 2.7e-158 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
PONIBJDO_00993 1.6e-129 IQ reductase
PONIBJDO_00994 1.3e-221 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PONIBJDO_00995 2.6e-74 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PONIBJDO_00996 1.9e-74 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PONIBJDO_00997 8.8e-259 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
PONIBJDO_00998 5.5e-142 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PONIBJDO_00999 8.8e-139 accA 2.1.3.15, 6.4.1.2 I alpha subunit
PONIBJDO_01000 5.7e-130 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
PONIBJDO_01005 4.5e-166 L Transposase and inactivated derivatives IS30 family
PONIBJDO_01010 9.8e-27 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PONIBJDO_01011 2.3e-57 ltrA_1 L Reverse transcriptase (RNA-dependent DNA polymerase)
PONIBJDO_01012 6e-97 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PONIBJDO_01013 1.1e-54
PONIBJDO_01014 1.1e-113 frnE Q DSBA-like thioredoxin domain
PONIBJDO_01015 1.7e-78 I alpha/beta hydrolase fold
PONIBJDO_01016 8.5e-20 K Helix-turn-helix XRE-family like proteins
PONIBJDO_01017 1.1e-35 S Phage derived protein Gp49-like (DUF891)
PONIBJDO_01019 1.6e-45 yrvD S Pfam:DUF1049
PONIBJDO_01020 9.5e-155 3.1.3.102, 3.1.3.104 S hydrolase
PONIBJDO_01021 8.1e-90 ntd 2.4.2.6 F Nucleoside
PONIBJDO_01022 1.3e-20
PONIBJDO_01023 2e-163 S Alpha/beta hydrolase of unknown function (DUF915)
PONIBJDO_01024 6.2e-114 yviA S Protein of unknown function (DUF421)
PONIBJDO_01025 4.5e-71 S Protein of unknown function (DUF3290)
PONIBJDO_01026 7e-41 ybaN S Protein of unknown function (DUF454)
PONIBJDO_01027 5.2e-237 L Transposase
PONIBJDO_01028 0.0 I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PONIBJDO_01029 5.5e-158 endA V DNA/RNA non-specific endonuclease
PONIBJDO_01030 1e-254 yifK E Amino acid permease
PONIBJDO_01032 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PONIBJDO_01033 1.3e-229 N Uncharacterized conserved protein (DUF2075)
PONIBJDO_01034 4.6e-123 S SNARE associated Golgi protein
PONIBJDO_01035 0.0 uvrA3 L excinuclease ABC, A subunit
PONIBJDO_01036 9.1e-56 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PONIBJDO_01037 1.2e-59 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PONIBJDO_01038 8.3e-69 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PONIBJDO_01039 8.1e-143 S DUF218 domain
PONIBJDO_01040 0.0 ubiB S ABC1 family
PONIBJDO_01041 2.5e-245 yhdP S Transporter associated domain
PONIBJDO_01042 5e-75 copY K Copper transport repressor CopY TcrY
PONIBJDO_01043 1.3e-244 EGP Major facilitator Superfamily
PONIBJDO_01044 1e-73 yeaL S UPF0756 membrane protein
PONIBJDO_01045 5.6e-79 yphH S Cupin domain
PONIBJDO_01046 1.6e-82 C Flavodoxin
PONIBJDO_01047 1.1e-158 K LysR substrate binding domain protein
PONIBJDO_01048 1.7e-170 1.1.1.346 C Aldo keto reductase
PONIBJDO_01049 2.1e-39 gcvR T Belongs to the UPF0237 family
PONIBJDO_01050 1.4e-240 XK27_08635 S UPF0210 protein
PONIBJDO_01051 1.5e-94 K Acetyltransferase (GNAT) domain
PONIBJDO_01052 1.2e-160 S Alpha beta hydrolase
PONIBJDO_01053 1.1e-158 gspA M family 8
PONIBJDO_01054 3.2e-239 L transposase, IS605 OrfB family
PONIBJDO_01055 1.3e-81 tlpA2 L Transposase IS200 like
PONIBJDO_01056 1.2e-117 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PONIBJDO_01057 3.8e-93
PONIBJDO_01058 4.6e-160 degV S EDD domain protein, DegV family
PONIBJDO_01059 0.0 FbpA K Fibronectin-binding protein
PONIBJDO_01060 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PONIBJDO_01061 6.2e-207 carA 6.3.5.5 F Belongs to the CarA family
PONIBJDO_01062 3.8e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PONIBJDO_01063 2.9e-70 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PONIBJDO_01064 1.5e-65 esbA S Family of unknown function (DUF5322)
PONIBJDO_01065 4.4e-70 rnhA 3.1.26.4 L Ribonuclease HI
PONIBJDO_01066 5.6e-222 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PONIBJDO_01067 7e-63 F Belongs to the NrdI family
PONIBJDO_01068 2.5e-164 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PONIBJDO_01069 2.7e-236 L Transposase
PONIBJDO_01070 1.7e-44 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PONIBJDO_01071 1.6e-105 ypsA S Belongs to the UPF0398 family
PONIBJDO_01072 4.4e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PONIBJDO_01073 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PONIBJDO_01074 2e-161 EG EamA-like transporter family
PONIBJDO_01075 3e-125 dnaD L DnaD domain protein
PONIBJDO_01076 2.9e-85 ypmB S Protein conserved in bacteria
PONIBJDO_01077 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PONIBJDO_01078 5.7e-172 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
PONIBJDO_01079 4.6e-169 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PONIBJDO_01080 4.2e-214 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PONIBJDO_01081 1.7e-193 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PONIBJDO_01082 3.8e-87 S Protein of unknown function (DUF1440)
PONIBJDO_01083 0.0 rafA 3.2.1.22 G alpha-galactosidase
PONIBJDO_01084 4.2e-189 galR K Periplasmic binding protein-like domain
PONIBJDO_01085 1.9e-169 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PONIBJDO_01086 1.4e-178 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PONIBJDO_01087 2.6e-124 lrgB M LrgB-like family
PONIBJDO_01088 1.9e-66 lrgA S LrgA family
PONIBJDO_01089 2.4e-130 lytT K response regulator receiver
PONIBJDO_01090 0.0 lytS 2.7.13.3 T LytS YhcK-type transmembrane receptor domain protein
PONIBJDO_01091 1.8e-148 f42a O Band 7 protein
PONIBJDO_01092 9.1e-264 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
PONIBJDO_01093 3.2e-155 yitU 3.1.3.104 S hydrolase
PONIBJDO_01094 1.6e-38 S Cytochrome B5
PONIBJDO_01095 1.4e-116 nreC K PFAM regulatory protein LuxR
PONIBJDO_01096 1.5e-161 hipB K Helix-turn-helix
PONIBJDO_01097 6.2e-57 yitW S Iron-sulfur cluster assembly protein
PONIBJDO_01098 7.2e-272 sufB O assembly protein SufB
PONIBJDO_01099 6.5e-81 nifU C SUF system FeS assembly protein, NifU family
PONIBJDO_01100 9.5e-236 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PONIBJDO_01101 7.3e-239 sufD O FeS assembly protein SufD
PONIBJDO_01102 6.5e-145 sufC O FeS assembly ATPase SufC
PONIBJDO_01103 4.2e-32 feoA P FeoA domain
PONIBJDO_01104 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
PONIBJDO_01105 8e-271 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
PONIBJDO_01106 5.8e-157 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PONIBJDO_01107 3.5e-64 ydiI Q Thioesterase superfamily
PONIBJDO_01108 2.4e-109 yvrI K sigma factor activity
PONIBJDO_01109 5e-202 G Transporter, major facilitator family protein
PONIBJDO_01110 0.0 S Bacterial membrane protein YfhO
PONIBJDO_01111 2.1e-102 T Ion transport 2 domain protein
PONIBJDO_01112 3.9e-78 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PONIBJDO_01113 5.5e-225 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PONIBJDO_01114 1.2e-95 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
PONIBJDO_01115 5.9e-194 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PONIBJDO_01116 1.5e-180 rihA 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PONIBJDO_01118 0.0 L PLD-like domain
PONIBJDO_01119 1.1e-34 higA K addiction module antidote protein HigA
PONIBJDO_01120 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
PONIBJDO_01121 7e-60 3.1.21.3 V type I restriction modification DNA specificity domain
PONIBJDO_01122 3.9e-29 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
PONIBJDO_01123 7.9e-177 xerC L Belongs to the 'phage' integrase family
PONIBJDO_01124 1.1e-100 3.1.21.3 V Type I restriction modification DNA specificity domain
PONIBJDO_01125 2.6e-299 2.1.1.72 V type I restriction-modification system
PONIBJDO_01126 8.3e-177 yfjM S Protein of unknown function DUF262
PONIBJDO_01127 2.3e-55 yhaI S Protein of unknown function (DUF805)
PONIBJDO_01128 2.2e-44
PONIBJDO_01129 0.0 nylA 3.5.1.4 J Belongs to the amidase family
PONIBJDO_01130 2.4e-22
PONIBJDO_01131 5.4e-47
PONIBJDO_01132 3.7e-96 K Acetyltransferase (GNAT) domain
PONIBJDO_01133 2.9e-295 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
PONIBJDO_01134 1.3e-230 gntT EG Gluconate
PONIBJDO_01135 3.8e-182 K Transcriptional regulator, LacI family
PONIBJDO_01136 1.8e-289 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
PONIBJDO_01137 2.5e-95
PONIBJDO_01138 2.1e-25
PONIBJDO_01139 1.3e-61 asp S Asp23 family, cell envelope-related function
PONIBJDO_01140 4.1e-89 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
PONIBJDO_01142 2.7e-49
PONIBJDO_01143 1.6e-67 yqkB S Belongs to the HesB IscA family
PONIBJDO_01144 6.8e-262 L PFAM Integrase catalytic region
PONIBJDO_01145 2.5e-172 ppaC 3.6.1.1 C inorganic pyrophosphatase
PONIBJDO_01146 1.7e-84 F NUDIX domain
PONIBJDO_01147 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PONIBJDO_01148 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PONIBJDO_01149 1.5e-107 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PONIBJDO_01150 4.3e-166 lacX 5.1.3.3 G Aldose 1-epimerase
PONIBJDO_01151 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PONIBJDO_01152 7.1e-161 dprA LU DNA protecting protein DprA
PONIBJDO_01153 1.2e-140 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PONIBJDO_01154 4.6e-160 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PONIBJDO_01155 4.4e-35 yozE S Belongs to the UPF0346 family
PONIBJDO_01156 1.6e-108 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
PONIBJDO_01157 9.5e-172 ypmR E lipolytic protein G-D-S-L family
PONIBJDO_01158 6.4e-151 DegV S EDD domain protein, DegV family
PONIBJDO_01159 5.3e-113 hlyIII S protein, hemolysin III
PONIBJDO_01160 1.9e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PONIBJDO_01161 7.7e-193 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PONIBJDO_01162 0.0 yfmR S ABC transporter, ATP-binding protein
PONIBJDO_01163 9.6e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PONIBJDO_01164 1.5e-236 S Tetratricopeptide repeat protein
PONIBJDO_01165 2.6e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PONIBJDO_01166 7.2e-250 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PONIBJDO_01167 2.5e-204 rpsA 1.17.7.4 J Ribosomal protein S1
PONIBJDO_01168 3.4e-118 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PONIBJDO_01169 8.5e-14 M Lysin motif
PONIBJDO_01170 1.5e-269 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
PONIBJDO_01171 9.1e-192 ypbB 5.1.3.1 S Helix-turn-helix domain
PONIBJDO_01172 2e-103 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PONIBJDO_01173 1.1e-127 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PONIBJDO_01174 7.7e-106 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PONIBJDO_01175 7.6e-138 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PONIBJDO_01176 1.5e-64 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PONIBJDO_01177 1.2e-163 xerD D recombinase XerD
PONIBJDO_01178 2.3e-167 cvfB S S1 domain
PONIBJDO_01179 2.1e-271 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PONIBJDO_01180 0.0 dnaE 2.7.7.7 L DNA polymerase
PONIBJDO_01181 3.1e-30 S Protein of unknown function (DUF2929)
PONIBJDO_01182 7.3e-236 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PONIBJDO_01183 9e-158 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PONIBJDO_01184 9.6e-124 trmK 2.1.1.217 S SAM-dependent methyltransferase
PONIBJDO_01185 1.2e-219 patA 2.6.1.1 E Aminotransferase
PONIBJDO_01186 3.8e-207 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PONIBJDO_01187 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PONIBJDO_01188 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PONIBJDO_01189 2e-180 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PONIBJDO_01190 6.8e-147 recO L Involved in DNA repair and RecF pathway recombination
PONIBJDO_01191 1.9e-169 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PONIBJDO_01192 9.9e-62 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
PONIBJDO_01193 1.9e-83 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PONIBJDO_01194 1.2e-183 phoH T phosphate starvation-inducible protein PhoH
PONIBJDO_01195 5.6e-175 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PONIBJDO_01196 9.6e-90 bioY S BioY family
PONIBJDO_01197 3.9e-262 argH 4.3.2.1 E argininosuccinate lyase
PONIBJDO_01198 2.2e-156 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PONIBJDO_01199 2.7e-39 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PONIBJDO_01200 1.5e-183 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PONIBJDO_01201 1.4e-186 L PFAM Integrase catalytic region
PONIBJDO_01202 3.8e-70 yqeY S YqeY-like protein
PONIBJDO_01203 7.5e-23 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PONIBJDO_01204 1.2e-264 glnPH2 P ABC transporter permease
PONIBJDO_01205 6.5e-131 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PONIBJDO_01206 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PONIBJDO_01207 1e-164 yniA G Phosphotransferase enzyme family
PONIBJDO_01208 8.4e-78 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PONIBJDO_01209 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PONIBJDO_01210 1.2e-52
PONIBJDO_01211 2.7e-129 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PONIBJDO_01212 1.1e-178 prmA J Ribosomal protein L11 methyltransferase
PONIBJDO_01213 4.1e-56
PONIBJDO_01215 8e-174 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PONIBJDO_01217 4.7e-199 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
PONIBJDO_01218 4.1e-275 pipD E Dipeptidase
PONIBJDO_01219 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PONIBJDO_01220 5.1e-199 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PONIBJDO_01221 0.0 dnaK O Heat shock 70 kDa protein
PONIBJDO_01222 2.3e-75 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PONIBJDO_01223 4.1e-195 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PONIBJDO_01224 5.8e-64
PONIBJDO_01225 2e-169 L Transposase and inactivated derivatives IS30 family
PONIBJDO_01226 1.2e-82 L PFAM Integrase catalytic region
PONIBJDO_01227 1.1e-77 L PFAM Integrase catalytic region
PONIBJDO_01228 4.5e-177 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PONIBJDO_01229 6.2e-168 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PONIBJDO_01230 2.1e-58 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PONIBJDO_01231 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PONIBJDO_01232 4.5e-49 ylxQ J ribosomal protein
PONIBJDO_01233 1e-44 ylxR K Protein of unknown function (DUF448)
PONIBJDO_01234 1e-215 nusA K Participates in both transcription termination and antitermination
PONIBJDO_01235 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
PONIBJDO_01236 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PONIBJDO_01237 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PONIBJDO_01238 9.2e-234 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PONIBJDO_01239 1.7e-137 cdsA 2.7.7.41 I Belongs to the CDS family
PONIBJDO_01240 9.3e-141 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PONIBJDO_01241 4.8e-94 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PONIBJDO_01242 2e-129 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PONIBJDO_01243 2.4e-153 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PONIBJDO_01244 1.2e-143 rpsB J Belongs to the universal ribosomal protein uS2 family
PONIBJDO_01245 4.4e-183 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PONIBJDO_01246 5.4e-49 yazA L GIY-YIG catalytic domain protein
PONIBJDO_01247 6.4e-142 yabB 2.1.1.223 L Methyltransferase small domain
PONIBJDO_01248 4.6e-117 plsC 2.3.1.51 I Acyltransferase
PONIBJDO_01249 9.8e-30 yneF S Uncharacterised protein family (UPF0154)
PONIBJDO_01250 1.3e-35 ynzC S UPF0291 protein
PONIBJDO_01251 4.7e-114 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PONIBJDO_01252 2.4e-212 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PONIBJDO_01253 1.8e-124 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PONIBJDO_01255 7.3e-88
PONIBJDO_01256 2.1e-91 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PONIBJDO_01257 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PONIBJDO_01258 1.9e-155 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PONIBJDO_01259 1.3e-176 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PONIBJDO_01260 4e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PONIBJDO_01261 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PONIBJDO_01262 1.3e-08
PONIBJDO_01263 6.1e-60 MA20_27270 S mazG nucleotide pyrophosphohydrolase
PONIBJDO_01264 3.6e-108 engB D Necessary for normal cell division and for the maintenance of normal septation
PONIBJDO_01265 1.4e-234 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PONIBJDO_01266 2.8e-238 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PONIBJDO_01267 1.5e-109 L Transposase
PONIBJDO_01268 2.1e-260 S Uncharacterised protein family (UPF0236)
PONIBJDO_01269 1.1e-98 L Transposase
PONIBJDO_01270 4.9e-55 tra L Transposase and inactivated derivatives, IS30 family
PONIBJDO_01271 7.2e-38 L Integrase core domain
PONIBJDO_01272 6.6e-184 L PFAM Integrase catalytic region
PONIBJDO_01273 5.2e-181 L Integrase core domain
PONIBJDO_01274 5.1e-139 L Bacterial dnaA protein
PONIBJDO_01275 5.9e-80 L transposase and inactivated derivatives, IS30 family
PONIBJDO_01276 3.8e-226 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PONIBJDO_01277 3.5e-163 S Tetratricopeptide repeat
PONIBJDO_01278 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PONIBJDO_01279 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PONIBJDO_01280 5.1e-35 rpsT J Binds directly to 16S ribosomal RNA
PONIBJDO_01281 1.2e-146 holA 2.7.7.7 L DNA polymerase III delta subunit
PONIBJDO_01282 0.0 comEC S Competence protein ComEC
PONIBJDO_01283 6.9e-89 comEB 3.5.4.12 F ComE operon protein 2
PONIBJDO_01284 7.6e-80 comEA L Competence protein ComEA
PONIBJDO_01285 6.7e-198 ylbL T Belongs to the peptidase S16 family
PONIBJDO_01286 5.1e-90 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PONIBJDO_01287 6.5e-99 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PONIBJDO_01288 3e-44 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
PONIBJDO_01289 2e-222 ftsW D Belongs to the SEDS family
PONIBJDO_01290 0.0 typA T GTP-binding protein TypA
PONIBJDO_01291 2.8e-137 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
PONIBJDO_01292 1.4e-47 yktA S Belongs to the UPF0223 family
PONIBJDO_01293 4.1e-275 lpdA 1.8.1.4 C Dehydrogenase
PONIBJDO_01294 1.8e-224 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PONIBJDO_01295 2.4e-181 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
PONIBJDO_01296 3e-209 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
PONIBJDO_01297 8.2e-102 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PONIBJDO_01298 2.4e-78
PONIBJDO_01299 9.8e-32 ykzG S Belongs to the UPF0356 family
PONIBJDO_01300 5.7e-180 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic
PONIBJDO_01301 5.7e-29
PONIBJDO_01302 1.2e-133 mltD CBM50 M NlpC P60 family protein
PONIBJDO_01304 7.7e-58
PONIBJDO_01305 1e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PONIBJDO_01306 3.8e-219 EG GntP family permease
PONIBJDO_01307 8.5e-84 KT Putative sugar diacid recognition
PONIBJDO_01308 4.4e-197 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PONIBJDO_01309 5.5e-217 patA 2.6.1.1 E Aminotransferase
PONIBJDO_01310 8.3e-137 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PONIBJDO_01311 1.3e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PONIBJDO_01312 8.5e-223 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PONIBJDO_01313 1.2e-76 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PONIBJDO_01314 5.1e-248 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PONIBJDO_01315 5.1e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
PONIBJDO_01316 1.9e-170 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PONIBJDO_01317 9e-23 UW LPXTG-motif cell wall anchor domain protein
PONIBJDO_01318 1.6e-157 L hmm pf00665
PONIBJDO_01319 1.3e-99 L Helix-turn-helix domain
PONIBJDO_01320 4e-173 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PONIBJDO_01321 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PONIBJDO_01322 9e-119 S Repeat protein
PONIBJDO_01323 1.1e-121 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
PONIBJDO_01324 1.8e-225 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PONIBJDO_01325 3.7e-57 XK27_04120 S Putative amino acid metabolism
PONIBJDO_01326 1.1e-214 iscS 2.8.1.7 E Aminotransferase class V
PONIBJDO_01327 1e-125 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PONIBJDO_01329 1.1e-98 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PONIBJDO_01330 4.2e-32 cspA K Cold shock protein
PONIBJDO_01331 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PONIBJDO_01332 6.2e-41 divIVA D DivIVA domain protein
PONIBJDO_01333 1.1e-141 ylmH S S4 domain protein
PONIBJDO_01334 3.2e-40 yggT S YGGT family
PONIBJDO_01335 9.4e-71 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PONIBJDO_01336 5.3e-226 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PONIBJDO_01337 6.6e-254 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PONIBJDO_01338 8.7e-148 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PONIBJDO_01339 3e-204 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PONIBJDO_01340 2.9e-262 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PONIBJDO_01341 3.4e-180 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PONIBJDO_01342 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PONIBJDO_01343 2.6e-56 ftsL D Cell division protein FtsL
PONIBJDO_01344 1.2e-174 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PONIBJDO_01345 3.1e-77 mraZ K Belongs to the MraZ family
PONIBJDO_01346 7.3e-56
PONIBJDO_01347 1.2e-10 S Protein of unknown function (DUF4044)
PONIBJDO_01348 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PONIBJDO_01349 3.9e-95 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PONIBJDO_01350 3.7e-162 rrmA 2.1.1.187 H Methyltransferase
PONIBJDO_01351 2.3e-182 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PONIBJDO_01353 1.6e-293 L Transposase IS66 family
PONIBJDO_01354 5.4e-67 XK27_01125 L PFAM IS66 Orf2 family protein
PONIBJDO_01358 7.1e-172 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
PONIBJDO_01359 1.5e-152 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PONIBJDO_01360 2e-115 yjbM 2.7.6.5 S RelA SpoT domain protein
PONIBJDO_01361 4.7e-114 yjbH Q Thioredoxin
PONIBJDO_01362 9.2e-264 pipD E Dipeptidase
PONIBJDO_01363 3e-203 coiA 3.6.4.12 S Competence protein
PONIBJDO_01364 3.2e-121 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PONIBJDO_01365 1.6e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PONIBJDO_01366 1.8e-76 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
PONIBJDO_01367 5.6e-261 S Uncharacterised protein family (UPF0236)
PONIBJDO_01368 7.2e-192 L Transposase
PONIBJDO_01369 3.1e-189 L PFAM Integrase catalytic region
PONIBJDO_01391 5.5e-110 dedA S SNARE-like domain protein
PONIBJDO_01392 2.4e-105 S Protein of unknown function (DUF1461)
PONIBJDO_01393 1.1e-133 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PONIBJDO_01394 1.3e-93 yutD S Protein of unknown function (DUF1027)
PONIBJDO_01395 2.2e-113 S Calcineurin-like phosphoesterase
PONIBJDO_01396 3.5e-219 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PONIBJDO_01397 1.7e-145 ytxK 2.1.1.72 L N-6 DNA Methylase
PONIBJDO_01399 6.3e-70
PONIBJDO_01400 2.7e-40
PONIBJDO_01401 8.3e-78 NU general secretion pathway protein
PONIBJDO_01402 7.1e-47 comGC U competence protein ComGC
PONIBJDO_01403 9.5e-181 comGB NU type II secretion system
PONIBJDO_01404 2.6e-180 comGA NU Type II IV secretion system protein
PONIBJDO_01405 3.5e-132 yebC K Transcriptional regulatory protein
PONIBJDO_01406 1.9e-134
PONIBJDO_01407 1.9e-181 ccpA K catabolite control protein A
PONIBJDO_01408 4.2e-211 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PONIBJDO_01409 3.5e-26
PONIBJDO_01410 9.4e-37 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PONIBJDO_01411 3.4e-147 ykuT M mechanosensitive ion channel
PONIBJDO_01412 5.2e-153 3.1.3.102, 3.1.3.104, 3.1.3.23 S haloacid dehalogenase-like hydrolase
PONIBJDO_01413 3.6e-76 ykuL S (CBS) domain
PONIBJDO_01414 4.4e-94 S Phosphoesterase
PONIBJDO_01415 2.7e-103 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PONIBJDO_01416 2.1e-143 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PONIBJDO_01417 1.3e-96 yslB S Protein of unknown function (DUF2507)
PONIBJDO_01418 6.1e-54 trxA O Belongs to the thioredoxin family
PONIBJDO_01419 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PONIBJDO_01420 1e-85 cvpA S Colicin V production protein
PONIBJDO_01421 6.1e-48 yrzB S Belongs to the UPF0473 family
PONIBJDO_01422 3.6e-76 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PONIBJDO_01423 4.1e-43 yrzL S Belongs to the UPF0297 family
PONIBJDO_01424 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PONIBJDO_01425 1.9e-232 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PONIBJDO_01426 4.2e-183 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PONIBJDO_01427 2.8e-31 yajC U Preprotein translocase
PONIBJDO_01428 2.6e-189 tgt_1 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PONIBJDO_01429 3.4e-191 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PONIBJDO_01430 1.9e-101 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PONIBJDO_01431 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PONIBJDO_01432 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PONIBJDO_01433 9.5e-209 rny S Endoribonuclease that initiates mRNA decay
PONIBJDO_01434 2.3e-259 S Uncharacterised protein family (UPF0236)
PONIBJDO_01435 7.6e-197 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PONIBJDO_01436 1.9e-228 cinA 3.5.1.42 S Belongs to the CinA family
PONIBJDO_01437 2.5e-101 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PONIBJDO_01438 7.4e-141 ymfM S Helix-turn-helix domain
PONIBJDO_01439 3.2e-250 ymfH S Peptidase M16
PONIBJDO_01440 1.6e-230 ymfF S Peptidase M16 inactive domain protein
PONIBJDO_01441 2.6e-160 aatB ET ABC transporter substrate-binding protein
PONIBJDO_01442 2.1e-117 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PONIBJDO_01443 3.2e-102 glnP P ABC transporter permease
PONIBJDO_01444 1.2e-91 mreD M rod shape-determining protein MreD
PONIBJDO_01445 2.2e-151 mreC M Involved in formation and maintenance of cell shape
PONIBJDO_01446 1.7e-179 mreB D cell shape determining protein MreB
PONIBJDO_01447 6.8e-121 radC L DNA repair protein
PONIBJDO_01448 1.1e-245 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PONIBJDO_01449 7.6e-230 ndh 1.6.99.3 C NADH dehydrogenase
PONIBJDO_01450 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PONIBJDO_01451 1.8e-309 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PONIBJDO_01452 8.2e-185 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
PONIBJDO_01453 1.9e-272 cydA 1.10.3.14 C ubiquinol oxidase
PONIBJDO_01454 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PONIBJDO_01455 8.5e-229 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PONIBJDO_01456 1.3e-215 iscS2 2.8.1.7 E Aminotransferase class V
PONIBJDO_01457 2.2e-230 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PONIBJDO_01458 3.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PONIBJDO_01459 3.6e-165 L Transposase
PONIBJDO_01460 2.3e-262 L PFAM Integrase catalytic region
PONIBJDO_01461 3.8e-198 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PONIBJDO_01462 0.0 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
PONIBJDO_01463 2.5e-100 S Belongs to the UPF0246 family
PONIBJDO_01464 6.9e-44 S Membrane
PONIBJDO_01465 2.1e-260 S Uncharacterised protein family (UPF0236)
PONIBJDO_01466 1.7e-84 S Membrane
PONIBJDO_01467 8.1e-75 4.4.1.5 E Glyoxalase
PONIBJDO_01468 1.5e-21
PONIBJDO_01469 7.1e-86 yueI S Protein of unknown function (DUF1694)
PONIBJDO_01470 1.7e-235 rarA L recombination factor protein RarA
PONIBJDO_01471 4.4e-46
PONIBJDO_01472 4.3e-83 usp6 T universal stress protein
PONIBJDO_01473 2.8e-207 araR K Transcriptional regulator
PONIBJDO_01474 3.5e-157 ytbE 1.1.1.346 S Aldo keto reductase
PONIBJDO_01475 1.1e-93 maa 2.3.1.79 S Maltose O-acetyltransferase
PONIBJDO_01476 4.4e-171 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
PONIBJDO_01477 1.3e-129 1.1.1.100 I Enoyl-(Acyl carrier protein) reductase
PONIBJDO_01478 1.8e-39 3.4.17.22 S M6 family metalloprotease domain protein
PONIBJDO_01479 4.5e-102 araP U Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PONIBJDO_01480 7.2e-96 L Helix-turn-helix domain
PONIBJDO_01481 9.6e-139 L hmm pf00665
PONIBJDO_01482 1.9e-147 2.3.1.19 K Helix-turn-helix XRE-family like proteins
PONIBJDO_01483 4e-189 L PFAM Integrase catalytic region
PONIBJDO_01484 5.3e-217 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PONIBJDO_01485 3.3e-46 gcvH E glycine cleavage
PONIBJDO_01486 4.1e-220 rodA D Belongs to the SEDS family
PONIBJDO_01487 1e-31 S Protein of unknown function (DUF2969)
PONIBJDO_01488 1.9e-178 mbl D Cell shape determining protein MreB Mrl
PONIBJDO_01489 2.1e-241 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PONIBJDO_01490 1.3e-33 ywzB S Protein of unknown function (DUF1146)
PONIBJDO_01491 1e-67 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PONIBJDO_01492 1.1e-267 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PONIBJDO_01493 1.9e-164 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PONIBJDO_01494 4e-284 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PONIBJDO_01495 5.1e-93 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PONIBJDO_01496 1.1e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PONIBJDO_01497 1.5e-14 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PONIBJDO_01498 7.3e-124 atpB C it plays a direct role in the translocation of protons across the membrane
PONIBJDO_01499 5e-232 pyrP F Permease
PONIBJDO_01500 6.3e-129 yibF S overlaps another CDS with the same product name
PONIBJDO_01501 9.9e-192 yibE S overlaps another CDS with the same product name
PONIBJDO_01502 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PONIBJDO_01503 6.6e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PONIBJDO_01504 9.2e-231 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PONIBJDO_01505 1e-195 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PONIBJDO_01506 6.4e-162 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PONIBJDO_01507 6.1e-194 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PONIBJDO_01508 6e-108 tdk 2.7.1.21 F thymidine kinase
PONIBJDO_01509 4e-264 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain
PONIBJDO_01510 3.2e-135 cobQ S CobB/CobQ-like glutamine amidotransferase domain
PONIBJDO_01511 2.7e-223 arcD U Amino acid permease
PONIBJDO_01512 2e-261 E Arginine ornithine antiporter
PONIBJDO_01513 2.7e-79 argR K Regulates arginine biosynthesis genes
PONIBJDO_01514 4.1e-239 arcA 3.5.3.6 E Arginine
PONIBJDO_01515 3.9e-187 ampC V Beta-lactamase
PONIBJDO_01516 1.9e-32
PONIBJDO_01517 2e-247 M domain protein
PONIBJDO_01518 1.3e-238 M domain protein
PONIBJDO_01519 4.5e-91
PONIBJDO_01521 1.9e-159 yjcE P Sodium proton antiporter
PONIBJDO_01522 1e-73 yjcE P Sodium proton antiporter
PONIBJDO_01523 5.2e-56
PONIBJDO_01525 4.5e-85
PONIBJDO_01526 0.0 copA 3.6.3.54 P P-type ATPase
PONIBJDO_01527 6.3e-50 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PONIBJDO_01528 1.3e-55 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PONIBJDO_01529 4.5e-103 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
PONIBJDO_01530 3.3e-161 EG EamA-like transporter family
PONIBJDO_01531 4.3e-172 arcC 2.7.2.2 E Belongs to the carbamate kinase family
PONIBJDO_01532 3.4e-191 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PONIBJDO_01533 8.1e-154 KT YcbB domain
PONIBJDO_01534 1.8e-300 xylB 2.7.1.17 G Belongs to the FGGY kinase family
PONIBJDO_01535 2.1e-163 xylR GK ROK family
PONIBJDO_01536 1.3e-28
PONIBJDO_01537 1e-262 pgi 5.3.1.9 G Belongs to the GPI family
PONIBJDO_01538 9e-94 lacA 2.3.1.79 S Transferase hexapeptide repeat
PONIBJDO_01539 2.6e-155 glcU U sugar transport
PONIBJDO_01540 6.8e-273 yclK 2.7.13.3 T Histidine kinase
PONIBJDO_01541 1.5e-132 K response regulator
PONIBJDO_01542 1.9e-54 sip L Belongs to the 'phage' integrase family
PONIBJDO_01543 1.3e-10 K Cro/C1-type HTH DNA-binding domain
PONIBJDO_01544 3.9e-09 S Helix-turn-helix domain
PONIBJDO_01548 1e-85 S DNA primase
PONIBJDO_01551 4.9e-12 S head-tail joining protein
PONIBJDO_01552 8.4e-30 L HNH endonuclease
PONIBJDO_01553 2.2e-26 terS L Phage terminase, small subunit
PONIBJDO_01554 1.5e-199 terL S overlaps another CDS with the same product name
PONIBJDO_01555 1.8e-140 S Phage portal protein
PONIBJDO_01556 8.4e-189 S Caudovirus prohead serine protease
PONIBJDO_01557 1.9e-17 S Phage gp6-like head-tail connector protein
PONIBJDO_01558 1.1e-23
PONIBJDO_01559 8.1e-190 L PFAM Integrase catalytic region
PONIBJDO_01561 2.8e-79 lytE M Lysin motif
PONIBJDO_01562 2e-149 XK27_02985 S Cof-like hydrolase
PONIBJDO_01563 2.3e-81 K Transcriptional regulator
PONIBJDO_01564 0.0 oatA I Acyltransferase
PONIBJDO_01565 8.7e-53
PONIBJDO_01566 1.9e-178 L PFAM Integrase catalytic region
PONIBJDO_01567 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PONIBJDO_01568 9.4e-253 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PONIBJDO_01569 1.7e-125 ybbR S YbbR-like protein
PONIBJDO_01570 5e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PONIBJDO_01571 4.8e-249 fucP G Major Facilitator Superfamily
PONIBJDO_01572 1.7e-66 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PONIBJDO_01573 2.7e-166 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PONIBJDO_01574 1.6e-168 murB 1.3.1.98 M Cell wall formation
PONIBJDO_01575 2.7e-102 dnaQ 2.7.7.7 L DNA polymerase III
PONIBJDO_01576 4.4e-76 S PAS domain
PONIBJDO_01577 2.6e-86 K Acetyltransferase (GNAT) domain
PONIBJDO_01578 2.9e-81 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PONIBJDO_01579 3.8e-179 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PONIBJDO_01580 6.2e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PONIBJDO_01581 6.3e-105 yxjI
PONIBJDO_01582 1.4e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PONIBJDO_01583 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PONIBJDO_01584 6.8e-147 est 3.1.1.1 S Serine aminopeptidase, S33
PONIBJDO_01585 1.8e-34 secG U Preprotein translocase
PONIBJDO_01586 2.6e-291 clcA P chloride
PONIBJDO_01587 7.1e-248 yifK E Amino acid permease
PONIBJDO_01588 1.5e-236 L Transposase
PONIBJDO_01589 4.2e-250 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PONIBJDO_01590 4.8e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PONIBJDO_01591 3.2e-228 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PONIBJDO_01592 1.1e-189 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PONIBJDO_01594 2.1e-103 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PONIBJDO_01595 2e-239 glpT G Major Facilitator Superfamily
PONIBJDO_01596 8.8e-15
PONIBJDO_01598 4e-170 whiA K May be required for sporulation
PONIBJDO_01599 1.4e-186 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PONIBJDO_01600 2.1e-160 rapZ S Displays ATPase and GTPase activities
PONIBJDO_01601 5.4e-245 steT E amino acid
PONIBJDO_01602 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PONIBJDO_01603 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PONIBJDO_01604 1.5e-13
PONIBJDO_01605 2.3e-116 yfbR S HD containing hydrolase-like enzyme
PONIBJDO_01606 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PONIBJDO_01607 1.6e-88 ykhA 3.1.2.20 I Thioesterase superfamily
PONIBJDO_01608 1.1e-158 aatB ET PFAM extracellular solute-binding protein, family 3
PONIBJDO_01609 8.4e-218 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PONIBJDO_01610 5e-173 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PONIBJDO_01611 3.5e-163 lutA C Cysteine-rich domain
PONIBJDO_01612 7.5e-288 lutB C 4Fe-4S dicluster domain
PONIBJDO_01613 3.9e-136 yrjD S LUD domain
PONIBJDO_01614 5.7e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PONIBJDO_01615 1.8e-184 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PONIBJDO_01616 2.2e-156 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PONIBJDO_01617 7.8e-177 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PONIBJDO_01618 4.9e-52 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
PONIBJDO_01619 3.1e-32 KT PspC domain protein
PONIBJDO_01620 1.7e-187 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PONIBJDO_01621 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PONIBJDO_01622 3.8e-96 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PONIBJDO_01623 1.3e-114 comFC S Competence protein
PONIBJDO_01624 1.4e-256 comFA L Helicase C-terminal domain protein
PONIBJDO_01625 8.3e-111 yvyE 3.4.13.9 S YigZ family
PONIBJDO_01626 5.4e-235 EGP Major facilitator Superfamily
PONIBJDO_01627 7.4e-68 rmaI K Transcriptional regulator
PONIBJDO_01628 9.2e-40
PONIBJDO_01629 0.0 ydaO E amino acid
PONIBJDO_01630 4.3e-305 ybeC E amino acid
PONIBJDO_01631 8.2e-82 S YbaK proline--tRNA ligase associated domain protein
PONIBJDO_01632 1.9e-292 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PONIBJDO_01633 1.1e-43 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PONIBJDO_01635 1.4e-113 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PONIBJDO_01636 0.0 uup S ABC transporter, ATP-binding protein
PONIBJDO_01637 4e-181 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PONIBJDO_01638 2.5e-225 mtnE 2.6.1.83 E Aminotransferase
PONIBJDO_01639 2.3e-142 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
PONIBJDO_01640 1.4e-136 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PONIBJDO_01641 1.9e-228 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PONIBJDO_01642 3.6e-132 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PONIBJDO_01643 8.6e-198 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PONIBJDO_01644 1.5e-103 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PONIBJDO_01645 9.5e-127 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PONIBJDO_01646 4.2e-194 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PONIBJDO_01647 5.3e-173 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PONIBJDO_01648 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PONIBJDO_01649 3.2e-278 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PONIBJDO_01650 1.5e-135 fat 3.1.2.21 I Acyl-ACP thioesterase
PONIBJDO_01651 2e-155 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PONIBJDO_01652 5.9e-58 yabA L Involved in initiation control of chromosome replication
PONIBJDO_01653 8.2e-185 holB 2.7.7.7 L DNA polymerase III
PONIBJDO_01654 7.6e-52 yaaQ S Cyclic-di-AMP receptor
PONIBJDO_01655 4.8e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PONIBJDO_01656 9.7e-39 S Protein of unknown function (DUF2508)
PONIBJDO_01657 7.4e-109 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PONIBJDO_01658 7e-47 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PONIBJDO_01659 3.8e-297 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PONIBJDO_01660 3.5e-91 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PONIBJDO_01661 3.4e-35 nrdH O Glutaredoxin
PONIBJDO_01662 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PONIBJDO_01663 3.4e-199 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PONIBJDO_01664 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PONIBJDO_01665 6.4e-126 S Putative adhesin
PONIBJDO_01666 1.6e-82 XK27_06920 S Protein of unknown function (DUF1700)
PONIBJDO_01667 4e-56 K transcriptional regulator PadR family
PONIBJDO_01668 2e-40 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PONIBJDO_01670 1.5e-48
PONIBJDO_01671 3.2e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PONIBJDO_01672 1.7e-82 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PONIBJDO_01673 2.7e-126 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PONIBJDO_01674 3.9e-60 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PONIBJDO_01675 4.5e-244 M Glycosyl transferase family group 2
PONIBJDO_01677 1.3e-226 aadAT EK Aminotransferase, class I
PONIBJDO_01678 3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PONIBJDO_01679 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PONIBJDO_01680 3.4e-97 nusG K Participates in transcription elongation, termination and antitermination
PONIBJDO_01681 2.2e-16 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PONIBJDO_01682 1.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PONIBJDO_01683 2.3e-136 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PONIBJDO_01684 2.1e-70 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PONIBJDO_01685 1.7e-273 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PONIBJDO_01686 1.7e-207 yacL S domain protein
PONIBJDO_01687 2.3e-254 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PONIBJDO_01688 2e-97 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
PONIBJDO_01689 1.5e-49 HA62_12640 S GCN5-related N-acetyl-transferase
PONIBJDO_01690 2.6e-126 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PONIBJDO_01691 1.5e-266 pepC 3.4.22.40 E Peptidase C1-like family
PONIBJDO_01692 7.4e-141 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PONIBJDO_01693 6.3e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PONIBJDO_01694 2.4e-119 tcyB E ABC transporter
PONIBJDO_01695 9.4e-214 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PONIBJDO_01696 3.1e-169 I alpha/beta hydrolase fold
PONIBJDO_01697 1.2e-134 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PONIBJDO_01698 0.0 S Bacterial membrane protein, YfhO
PONIBJDO_01699 3.8e-184 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
PONIBJDO_01700 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PONIBJDO_01702 1.9e-85 ydcK S Belongs to the SprT family
PONIBJDO_01703 0.0 yhgF K Tex-like protein N-terminal domain protein
PONIBJDO_01704 5.1e-153 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PONIBJDO_01705 1.7e-284 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PONIBJDO_01706 1.8e-127 gntR1 K UbiC transcription regulator-associated domain protein
PONIBJDO_01707 3.9e-133 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PONIBJDO_01708 9.5e-300 aspT P Predicted Permease Membrane Region
PONIBJDO_01709 2e-250 EGP Major facilitator Superfamily
PONIBJDO_01710 3.8e-111
PONIBJDO_01713 7.3e-52 yjjH S Calcineurin-like phosphoesterase
PONIBJDO_01714 1.2e-85 yjjH S Calcineurin-like phosphoesterase
PONIBJDO_01715 5e-263 dtpT U amino acid peptide transporter
PONIBJDO_01716 3.7e-19
PONIBJDO_01718 3.7e-91 yqiG C Oxidoreductase
PONIBJDO_01719 7.8e-20 yqiG C Oxidoreductase
PONIBJDO_01720 1.1e-50 yqiG C Oxidoreductase
PONIBJDO_01721 8.5e-54 S macrophage migration inhibitory factor
PONIBJDO_01722 2.4e-65 K HxlR-like helix-turn-helix
PONIBJDO_01723 2.1e-88 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PONIBJDO_01725 1.2e-224 L Transposase IS66 family
PONIBJDO_01727 5.5e-280 O Arylsulfotransferase (ASST)
PONIBJDO_01729 3.4e-132 O Bacterial dnaA protein
PONIBJDO_01730 3.2e-236 L Integrase core domain
PONIBJDO_01731 1.1e-151 L Transposase IS66 family
PONIBJDO_01732 2.8e-152 L Transposase
PONIBJDO_01734 2.9e-60 XK27_01125 L PFAM IS66 Orf2 family protein
PONIBJDO_01736 6.6e-54 UW LPXTG-motif cell wall anchor domain protein
PONIBJDO_01737 4.4e-140 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
PONIBJDO_01739 6.9e-100 tra L Transposase and inactivated derivatives, IS30 family
PONIBJDO_01740 2.7e-288 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PONIBJDO_01741 1.1e-189 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PONIBJDO_01742 1.4e-170 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PONIBJDO_01743 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PONIBJDO_01744 1.5e-97 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PONIBJDO_01745 4.2e-256 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PONIBJDO_01746 9.8e-67 yabR J RNA binding
PONIBJDO_01747 3.3e-56 divIC D Septum formation initiator
PONIBJDO_01748 8.1e-39 yabO J S4 domain protein
PONIBJDO_01749 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PONIBJDO_01750 3.3e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PONIBJDO_01751 4e-113 S (CBS) domain
PONIBJDO_01752 1.2e-146 tesE Q hydratase
PONIBJDO_01753 4.7e-243 codA 3.5.4.1 F cytosine deaminase
PONIBJDO_01754 6.8e-251 U Belongs to the purine-cytosine permease (2.A.39) family
PONIBJDO_01755 3.2e-62 L Toxic component of a toxin-antitoxin (TA) module
PONIBJDO_01756 1.9e-211 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PONIBJDO_01757 2.2e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PONIBJDO_01759 1.2e-293 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PONIBJDO_01760 3.7e-232 dltB M MBOAT, membrane-bound O-acyltransferase family
PONIBJDO_01761 2.8e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PONIBJDO_01762 5.2e-253 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PONIBJDO_01763 5.9e-166 glsA 3.5.1.2 E Belongs to the glutaminase family
PONIBJDO_01764 3.9e-131 sprD D Domain of Unknown Function (DUF1542)
PONIBJDO_01765 4.2e-17 sprD D Domain of Unknown Function (DUF1542)
PONIBJDO_01766 3.1e-126 L PFAM Integrase catalytic region
PONIBJDO_01767 1.4e-249 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PONIBJDO_01768 1.8e-259 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PONIBJDO_01769 2.6e-158 htpX O Belongs to the peptidase M48B family
PONIBJDO_01770 7e-93 lemA S LemA family
PONIBJDO_01771 1.5e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PONIBJDO_01772 4.6e-120 pgm3 G Belongs to the phosphoglycerate mutase family
PONIBJDO_01773 1.4e-161 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PONIBJDO_01774 2.3e-139 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PONIBJDO_01775 3.6e-233 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PONIBJDO_01776 1.1e-124 srtA 3.4.22.70 M sortase family
PONIBJDO_01777 1.3e-165 S Alpha/beta hydrolase of unknown function (DUF915)
PONIBJDO_01778 1.2e-236 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PONIBJDO_01779 4.6e-41 rpmE2 J Ribosomal protein L31
PONIBJDO_01780 5.7e-236 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PONIBJDO_01781 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PONIBJDO_01782 8.7e-51 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PONIBJDO_01783 3e-66 ywiB S Domain of unknown function (DUF1934)
PONIBJDO_01784 7.9e-146 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
PONIBJDO_01785 5e-270 ywfO S HD domain protein
PONIBJDO_01786 2.5e-147 yxeH S hydrolase
PONIBJDO_01787 2.1e-49
PONIBJDO_01788 1.1e-178 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PONIBJDO_01789 7.5e-242 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PONIBJDO_01790 2.6e-149 purR 2.4.2.7 F pur operon repressor
PONIBJDO_01791 1.4e-118 znuB U ABC 3 transport family
PONIBJDO_01792 1.4e-121 fhuC P ABC transporter
PONIBJDO_01793 8.2e-168 znuA P Belongs to the bacterial solute-binding protein 9 family
PONIBJDO_01794 4.9e-159 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PONIBJDO_01795 6.8e-37 veg S Biofilm formation stimulator VEG
PONIBJDO_01796 5.2e-159 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PONIBJDO_01797 3.2e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PONIBJDO_01798 1.9e-155 tatD L hydrolase, TatD family
PONIBJDO_01799 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PONIBJDO_01800 3.6e-162 yunF F Protein of unknown function DUF72
PONIBJDO_01802 1e-130 cobB K SIR2 family
PONIBJDO_01803 1.6e-177
PONIBJDO_01804 2.1e-222 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PONIBJDO_01805 9.3e-167 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PONIBJDO_01806 2.6e-191 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PONIBJDO_01807 1.6e-185 hpaIM 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
PONIBJDO_01808 2.2e-81 ndk 2.7.4.6 F Belongs to the NDK family
PONIBJDO_01809 0.0 helD 3.6.4.12 L DNA helicase
PONIBJDO_01810 5.3e-204 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PONIBJDO_01812 4.1e-147 gabT 2.6.1.19 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PONIBJDO_01813 1.7e-91 gabT 2.6.1.19 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PONIBJDO_01814 1e-265 yfnA E amino acid
PONIBJDO_01815 9.3e-118 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PONIBJDO_01816 4e-41 1.3.5.4 S FMN binding
PONIBJDO_01817 1.6e-219 norA EGP Major facilitator Superfamily
PONIBJDO_01818 2e-169 L Transposase and inactivated derivatives IS30 family
PONIBJDO_01819 1.4e-170 L Transposase
PONIBJDO_01820 1.1e-141 L PFAM Integrase catalytic region
PONIBJDO_01821 5.2e-10 L Transposase
PONIBJDO_01822 1.8e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PONIBJDO_01823 2.8e-154 metQ1 P Belongs to the nlpA lipoprotein family
PONIBJDO_01824 1e-190 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PONIBJDO_01825 3.1e-103 metI P ABC transporter permease
PONIBJDO_01826 7e-217 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PONIBJDO_01827 1.2e-252 clcA P chloride
PONIBJDO_01828 6.9e-77 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PONIBJDO_01829 4.5e-104 proW P ABC transporter, permease protein
PONIBJDO_01830 5.1e-139 proV E ABC transporter, ATP-binding protein
PONIBJDO_01831 6.3e-109 proWZ P ABC transporter permease
PONIBJDO_01832 2.3e-162 proX M ABC transporter, substrate-binding protein, QAT family
PONIBJDO_01833 2.6e-74 K Transcriptional regulator
PONIBJDO_01834 4.8e-154 1.6.5.2 GM NAD(P)H-binding
PONIBJDO_01836 3.3e-217 5.4.2.7 G Metalloenzyme superfamily
PONIBJDO_01837 0.0 cadA P P-type ATPase
PONIBJDO_01838 8.2e-110 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
PONIBJDO_01839 2.1e-126
PONIBJDO_01840 4e-38 S Sugar efflux transporter for intercellular exchange
PONIBJDO_01841 2.7e-166 L Transposase and inactivated derivatives IS30 family
PONIBJDO_01842 5.9e-247 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
PONIBJDO_01844 0.0 L Helicase C-terminal domain protein
PONIBJDO_01845 9.9e-75 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I PAP2 superfamily
PONIBJDO_01846 3.8e-176 S Aldo keto reductase
PONIBJDO_01848 5e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PONIBJDO_01849 1.1e-36 psiE S Phosphate-starvation-inducible E
PONIBJDO_01850 1e-101 ydeN S Serine hydrolase
PONIBJDO_01852 1.3e-61 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PONIBJDO_01853 6e-109 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PONIBJDO_01854 1.2e-255 nhaC C Na H antiporter NhaC
PONIBJDO_01855 7.7e-38 S Cytochrome b5-like Heme/Steroid binding domain
PONIBJDO_01856 4.8e-114 ywnB S NAD(P)H-binding
PONIBJDO_01857 2.9e-37
PONIBJDO_01858 4.2e-130 IQ Dehydrogenase reductase
PONIBJDO_01859 4.1e-237 yhjE EGP MFS transporter, metabolite H symporter (MHS) family protein
PONIBJDO_01860 2.7e-68 L Belongs to the 'phage' integrase family
PONIBJDO_01861 1.8e-141 L PFAM Integrase catalytic region
PONIBJDO_01862 8.8e-68 moaC 4.6.1.17 H Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
PONIBJDO_01863 5.5e-45 yitW S Pfam:DUF59
PONIBJDO_01864 1.6e-169 moaA 4.1.99.22 H Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
PONIBJDO_01865 3.8e-106 tra L Transposase and inactivated derivatives, IS30 family
PONIBJDO_01867 1.3e-240 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PONIBJDO_01868 9.7e-173
PONIBJDO_01869 1e-130 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PONIBJDO_01870 6.9e-242 purD 6.3.4.13 F Belongs to the GARS family
PONIBJDO_01871 8.6e-295 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PONIBJDO_01872 2.8e-105 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PONIBJDO_01873 1.2e-194 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PONIBJDO_01874 2.2e-276 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PONIBJDO_01875 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PONIBJDO_01876 2.3e-127 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PONIBJDO_01877 7e-37 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PONIBJDO_01878 9.7e-132 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PONIBJDO_01879 2e-252 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PONIBJDO_01880 4.7e-213 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PONIBJDO_01881 4.3e-83 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PONIBJDO_01882 1.3e-131 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
PONIBJDO_01883 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
PONIBJDO_01884 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PONIBJDO_01885 4.9e-177 K AI-2E family transporter
PONIBJDO_01886 1.1e-236 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PONIBJDO_01887 7.9e-96 ribA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PONIBJDO_01888 9.6e-115 thiE 2.5.1.3, 2.7.6.2, 5.4.2.6 S Haloacid dehalogenase-like hydrolase
PONIBJDO_01889 2.5e-115 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PONIBJDO_01890 1.7e-128 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PONIBJDO_01891 8.6e-173 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PONIBJDO_01892 3.9e-248 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PONIBJDO_01893 9.5e-172 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PONIBJDO_01894 7.4e-134 K LysR substrate binding domain
PONIBJDO_01895 1.4e-46 L PFAM transposase IS200-family protein
PONIBJDO_01896 2.1e-260 S Uncharacterised protein family (UPF0236)
PONIBJDO_01897 1.6e-52 azlD S branched-chain amino acid
PONIBJDO_01898 3.7e-136 azlC E AzlC protein
PONIBJDO_01899 6.5e-199 hpk31 2.7.13.3 T Histidine kinase
PONIBJDO_01900 1.2e-123 K response regulator
PONIBJDO_01901 2.9e-207 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PONIBJDO_01902 9.5e-172 deoR K sugar-binding domain protein
PONIBJDO_01903 1.1e-130 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
PONIBJDO_01904 2.7e-233 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
PONIBJDO_01905 2.9e-234 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
PONIBJDO_01906 3.4e-118 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PONIBJDO_01907 7.7e-135 XK27_01040 S Protein of unknown function (DUF1129)
PONIBJDO_01908 8.8e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PONIBJDO_01909 5.4e-32 yyzM S Bacterial protein of unknown function (DUF951)
PONIBJDO_01910 1.7e-154 spo0J K Belongs to the ParB family
PONIBJDO_01911 3.9e-139 soj D Sporulation initiation inhibitor
PONIBJDO_01912 4.3e-151 noc K Belongs to the ParB family
PONIBJDO_01913 2.5e-127 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PONIBJDO_01914 1.4e-161 fadB4 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
PONIBJDO_01915 5.6e-169 rihC 3.2.2.1 F Nucleoside
PONIBJDO_01916 3.3e-217 nupG F Nucleoside transporter
PONIBJDO_01917 3.2e-221 cycA E Amino acid permease
PONIBJDO_01918 1.4e-138 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PONIBJDO_01919 3.3e-264 glnP P ABC transporter
PONIBJDO_01920 3.8e-251 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PONIBJDO_01921 1.6e-157 L hmm pf00665
PONIBJDO_01922 1.3e-99 L Helix-turn-helix domain
PONIBJDO_01924 5.9e-191 V Beta-lactamase
PONIBJDO_01925 3e-93 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PONIBJDO_01926 5e-122 yhiD S MgtC family
PONIBJDO_01927 6.4e-39 S GyrI-like small molecule binding domain
PONIBJDO_01928 2.7e-70 S GyrI-like small molecule binding domain
PONIBJDO_01930 5.5e-118 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
PONIBJDO_01931 7.1e-50 azlD E Branched-chain amino acid transport
PONIBJDO_01932 1.4e-119 azlC E azaleucine resistance protein AzlC
PONIBJDO_01933 7.3e-60 K Aminotransferase class I and II
PONIBJDO_01934 2.5e-164 K Aminotransferase class I and II
PONIBJDO_01935 3.6e-288 S amidohydrolase
PONIBJDO_01936 3.8e-106 tra L Transposase and inactivated derivatives, IS30 family
PONIBJDO_01938 1.8e-161 S reductase
PONIBJDO_01939 9.1e-89 2.3.1.183 M Acetyltransferase GNAT family
PONIBJDO_01940 1.7e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PONIBJDO_01941 1.9e-247 yxbA 6.3.1.12 S ATP-grasp enzyme
PONIBJDO_01942 5.3e-292 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PONIBJDO_01943 0.0 asnB 6.3.5.4 E Asparagine synthase
PONIBJDO_01944 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PONIBJDO_01945 8.7e-254 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PONIBJDO_01946 3.3e-130 jag S R3H domain protein
PONIBJDO_01947 4.5e-130 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PONIBJDO_01948 2e-58 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PONIBJDO_01949 3.4e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)