ORF_ID e_value Gene_name EC_number CAZy COGs Description
GPFJAPFD_00001 6.1e-282 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GPFJAPFD_00002 1e-204 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
GPFJAPFD_00003 3.7e-235 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GPFJAPFD_00004 6.2e-90 S Protein of unknown function (DUF721)
GPFJAPFD_00005 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GPFJAPFD_00006 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GPFJAPFD_00007 3.3e-68 S Transmembrane domain of unknown function (DUF3566)
GPFJAPFD_00008 2.3e-259 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
GPFJAPFD_00009 3.2e-57 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GPFJAPFD_00013 8.9e-101 S Protein of unknown function DUF45
GPFJAPFD_00014 1.7e-187 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
GPFJAPFD_00015 6.6e-243 ytfL P Transporter associated domain
GPFJAPFD_00016 7.5e-121 cah 4.2.1.1 P Reversible hydration of carbon dioxide
GPFJAPFD_00017 1.1e-38
GPFJAPFD_00018 4.3e-66
GPFJAPFD_00019 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
GPFJAPFD_00020 0.0 yjjP S Threonine/Serine exporter, ThrE
GPFJAPFD_00021 9.4e-300 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GPFJAPFD_00022 5.9e-205 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
GPFJAPFD_00023 1.4e-41 S Protein of unknown function (DUF3073)
GPFJAPFD_00024 1.7e-63 I Sterol carrier protein
GPFJAPFD_00025 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
GPFJAPFD_00026 1.5e-35
GPFJAPFD_00027 1.3e-145 gluP 3.4.21.105 S Rhomboid family
GPFJAPFD_00028 2.3e-230 L ribosomal rna small subunit methyltransferase
GPFJAPFD_00029 3.1e-57 crgA D Involved in cell division
GPFJAPFD_00030 2.6e-141 S Bacterial protein of unknown function (DUF881)
GPFJAPFD_00031 1.1e-208 srtA 3.4.22.70 M Sortase family
GPFJAPFD_00032 1.7e-119 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
GPFJAPFD_00033 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
GPFJAPFD_00034 5.8e-177 T Protein tyrosine kinase
GPFJAPFD_00035 2e-261 pbpA M penicillin-binding protein
GPFJAPFD_00036 4.1e-244 rodA D Belongs to the SEDS family
GPFJAPFD_00037 5.7e-241 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
GPFJAPFD_00038 9.6e-73 fhaB T Inner membrane component of T3SS, cytoplasmic domain
GPFJAPFD_00039 1.2e-131 fhaA T Protein of unknown function (DUF2662)
GPFJAPFD_00040 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
GPFJAPFD_00041 7.7e-144 2.7.13.3 T Histidine kinase
GPFJAPFD_00042 5.5e-67 2.7.13.3 T Histidine kinase
GPFJAPFD_00043 9.3e-113 K helix_turn_helix, Lux Regulon
GPFJAPFD_00044 5.1e-193 pldB 3.1.1.5 I Serine aminopeptidase, S33
GPFJAPFD_00045 8.8e-160 yicL EG EamA-like transporter family
GPFJAPFD_00050 1.8e-22 2.7.13.3 T Histidine kinase
GPFJAPFD_00051 2e-36 K helix_turn_helix, Lux Regulon
GPFJAPFD_00052 9.4e-269 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
GPFJAPFD_00053 1.7e-279 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
GPFJAPFD_00054 0.0 cadA P E1-E2 ATPase
GPFJAPFD_00055 1.1e-186 ansA 3.5.1.1 EJ Asparaginase
GPFJAPFD_00056 6.9e-270 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
GPFJAPFD_00057 4.7e-162 htpX O Belongs to the peptidase M48B family
GPFJAPFD_00059 1.1e-186 K Helix-turn-helix XRE-family like proteins
GPFJAPFD_00060 1.8e-170 yddG EG EamA-like transporter family
GPFJAPFD_00061 0.0 pip S YhgE Pip domain protein
GPFJAPFD_00062 0.0 pip S YhgE Pip domain protein
GPFJAPFD_00063 1.6e-205 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
GPFJAPFD_00064 1.6e-249 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GPFJAPFD_00065 9.4e-297 clcA P Voltage gated chloride channel
GPFJAPFD_00066 1.3e-144 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GPFJAPFD_00067 3.3e-57 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GPFJAPFD_00068 4.1e-29 E Receptor family ligand binding region
GPFJAPFD_00069 1.3e-196 K helix_turn _helix lactose operon repressor
GPFJAPFD_00070 2.2e-295 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
GPFJAPFD_00071 8.3e-114 S Protein of unknown function, DUF624
GPFJAPFD_00072 0.0 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
GPFJAPFD_00073 6.9e-221 G Bacterial extracellular solute-binding protein
GPFJAPFD_00074 8.4e-162 amyD3 P Binding-protein-dependent transport system inner membrane component
GPFJAPFD_00075 1.6e-149 amyC5 P Binding-protein-dependent transport system inner membrane component
GPFJAPFD_00076 5.8e-278 scrT G Transporter major facilitator family protein
GPFJAPFD_00077 1e-251 yhjE EGP Sugar (and other) transporter
GPFJAPFD_00078 1.8e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
GPFJAPFD_00079 4e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
GPFJAPFD_00080 0.0 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
GPFJAPFD_00081 3.8e-29 G beta-mannosidase
GPFJAPFD_00082 2e-186 K helix_turn _helix lactose operon repressor
GPFJAPFD_00083 8.3e-12 S Protein of unknown function, DUF624
GPFJAPFD_00084 4.5e-269 aroP E aromatic amino acid transport protein AroP K03293
GPFJAPFD_00085 0.0 V FtsX-like permease family
GPFJAPFD_00086 3.3e-227 P Sodium/hydrogen exchanger family
GPFJAPFD_00087 1.3e-76 S Psort location Cytoplasmic, score 8.87
GPFJAPFD_00088 1e-177 3.4.22.70 M Sortase family
GPFJAPFD_00089 0.0 inlJ M domain protein
GPFJAPFD_00090 6.4e-258 M LPXTG cell wall anchor motif
GPFJAPFD_00091 2.5e-89 S Psort location Cytoplasmic, score 8.87
GPFJAPFD_00092 9.9e-275 cycA E Amino acid permease
GPFJAPFD_00093 1.2e-166 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
GPFJAPFD_00094 8.4e-128 thiF 2.7.7.73, 2.7.7.80 H ThiF family
GPFJAPFD_00095 2.5e-26 thiS 2.8.1.10 H ThiS family
GPFJAPFD_00096 1.8e-182 1.1.1.65 C Aldo/keto reductase family
GPFJAPFD_00097 1.9e-57 ydgJ K helix_turn_helix multiple antibiotic resistance protein
GPFJAPFD_00098 1.8e-284 lmrA1 V ABC transporter, ATP-binding protein
GPFJAPFD_00099 0.0 lmrA2 V ABC transporter transmembrane region
GPFJAPFD_00100 2e-119 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GPFJAPFD_00101 2e-237 G MFS/sugar transport protein
GPFJAPFD_00102 3e-299 efeU_1 P Iron permease FTR1 family
GPFJAPFD_00103 2.4e-92 tpd P Fe2+ transport protein
GPFJAPFD_00104 1.6e-230 S Predicted membrane protein (DUF2318)
GPFJAPFD_00105 1.5e-218 macB_2 V ABC transporter permease
GPFJAPFD_00107 1.8e-202 Z012_06715 V FtsX-like permease family
GPFJAPFD_00108 1.3e-148 macB V ABC transporter, ATP-binding protein
GPFJAPFD_00109 1.1e-61 S FMN_bind
GPFJAPFD_00110 6.6e-87 K Psort location Cytoplasmic, score 8.87
GPFJAPFD_00111 1.8e-274 pip S YhgE Pip domain protein
GPFJAPFD_00112 0.0 pip S YhgE Pip domain protein
GPFJAPFD_00113 1.6e-225 S Putative ABC-transporter type IV
GPFJAPFD_00114 6e-38 nrdH O Glutaredoxin
GPFJAPFD_00117 3.4e-305 pepD E Peptidase family C69
GPFJAPFD_00118 4e-195 XK27_01805 M Glycosyltransferase like family 2
GPFJAPFD_00120 2.3e-109 icaR K Bacterial regulatory proteins, tetR family
GPFJAPFD_00121 8.6e-168 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
GPFJAPFD_00122 1.2e-236 amt U Ammonium Transporter Family
GPFJAPFD_00123 1e-54 glnB K Nitrogen regulatory protein P-II
GPFJAPFD_00124 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
GPFJAPFD_00125 3.3e-248 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
GPFJAPFD_00126 4.3e-251 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
GPFJAPFD_00127 2.1e-137 cobQ S CobB/CobQ-like glutamine amidotransferase domain
GPFJAPFD_00128 1e-27 S granule-associated protein
GPFJAPFD_00129 0.0 ubiB S ABC1 family
GPFJAPFD_00130 4.1e-192 K Periplasmic binding protein domain
GPFJAPFD_00131 1.1e-242 G Bacterial extracellular solute-binding protein
GPFJAPFD_00132 4.3e-07 P Binding-protein-dependent transport system inner membrane component
GPFJAPFD_00133 3.1e-167 P Binding-protein-dependent transport system inner membrane component
GPFJAPFD_00134 9.3e-147 G Binding-protein-dependent transport system inner membrane component
GPFJAPFD_00135 0.0 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
GPFJAPFD_00136 0.0 sca1 3.2.1.187 GH121 DG Bacterial Ig-like domain (group 4)
GPFJAPFD_00137 0.0 G Bacterial Ig-like domain (group 4)
GPFJAPFD_00138 3.2e-208 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
GPFJAPFD_00139 2.7e-117 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GPFJAPFD_00140 3.9e-91
GPFJAPFD_00141 4.5e-224 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
GPFJAPFD_00142 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
GPFJAPFD_00143 5.5e-141 cpaE D bacterial-type flagellum organization
GPFJAPFD_00144 1.6e-185 cpaF U Type II IV secretion system protein
GPFJAPFD_00145 2.3e-133 U Type ii secretion system
GPFJAPFD_00146 6.1e-91 gspF NU Type II secretion system (T2SS), protein F
GPFJAPFD_00147 1.3e-42 S Protein of unknown function (DUF4244)
GPFJAPFD_00148 1.9e-59 U TadE-like protein
GPFJAPFD_00149 3e-55 S TIGRFAM helicase secretion neighborhood TadE-like protein
GPFJAPFD_00150 1.9e-214 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
GPFJAPFD_00151 1.6e-193 S Psort location CytoplasmicMembrane, score
GPFJAPFD_00152 1.1e-96 K Bacterial regulatory proteins, tetR family
GPFJAPFD_00153 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
GPFJAPFD_00154 1e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GPFJAPFD_00155 1.7e-134 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
GPFJAPFD_00156 1.4e-96 askB 1.1.1.3, 2.7.2.4 E ACT domain
GPFJAPFD_00157 1.8e-209 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GPFJAPFD_00158 2.7e-48 yitI S Acetyltransferase (GNAT) domain
GPFJAPFD_00159 2.4e-115
GPFJAPFD_00160 8.9e-303 S Calcineurin-like phosphoesterase
GPFJAPFD_00161 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GPFJAPFD_00162 0.0 3.2.1.99 GH43 G C-terminal of Glycosyl hydrolases family 43
GPFJAPFD_00163 9.4e-257 3.2.1.99 GH43 G C-terminal of Glycosyl hydrolases family 43
GPFJAPFD_00164 0.0 3.2.1.97 GH101 G Glycosyl hydrolases family 43
GPFJAPFD_00165 1.1e-195 K helix_turn _helix lactose operon repressor
GPFJAPFD_00166 1.3e-203 abf G Glycosyl hydrolases family 43
GPFJAPFD_00167 1.1e-292 G Bacterial extracellular solute-binding protein
GPFJAPFD_00168 4.6e-169 G Binding-protein-dependent transport system inner membrane component
GPFJAPFD_00169 1.7e-163 G Binding-protein-dependent transport system inner membrane component
GPFJAPFD_00170 1.2e-183 G beta-fructofuranosidase activity
GPFJAPFD_00171 8.5e-101 S Protein of unknown function, DUF624
GPFJAPFD_00172 1.1e-25 S Beta-L-arabinofuranosidase, GH127
GPFJAPFD_00173 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
GPFJAPFD_00174 7.7e-216 ino1 5.5.1.4 I Myo-inositol-1-phosphate synthase
GPFJAPFD_00175 1e-234 glf 5.4.99.9 M UDP-galactopyranose mutase
GPFJAPFD_00176 2.4e-190 3.6.1.27 I PAP2 superfamily
GPFJAPFD_00177 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GPFJAPFD_00178 4.5e-112 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GPFJAPFD_00179 1.9e-193 holB 2.7.7.7 L DNA polymerase III
GPFJAPFD_00180 2.1e-183 K helix_turn _helix lactose operon repressor
GPFJAPFD_00181 6e-39 ptsH G PTS HPr component phosphorylation site
GPFJAPFD_00182 4.6e-286 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GPFJAPFD_00183 1.1e-106 S Phosphatidylethanolamine-binding protein
GPFJAPFD_00184 0.0 pepD E Peptidase family C69
GPFJAPFD_00185 9.1e-289 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
GPFJAPFD_00186 6.7e-62 S Macrophage migration inhibitory factor (MIF)
GPFJAPFD_00187 2.2e-96 S GtrA-like protein
GPFJAPFD_00188 2.1e-263 EGP Major facilitator Superfamily
GPFJAPFD_00189 1.5e-123 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
GPFJAPFD_00190 7e-184
GPFJAPFD_00191 1.2e-111 S Protein of unknown function (DUF805)
GPFJAPFD_00192 5.5e-297 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GPFJAPFD_00195 3.6e-269 S Calcineurin-like phosphoesterase
GPFJAPFD_00196 1.1e-139 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
GPFJAPFD_00197 7.1e-272 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
GPFJAPFD_00198 1.3e-131 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
GPFJAPFD_00199 3.6e-200 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
GPFJAPFD_00200 1e-256 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GPFJAPFD_00201 1.2e-176 plsC2 2.3.1.51 I Phosphate acyltransferases
GPFJAPFD_00202 1.7e-179 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
GPFJAPFD_00203 2.9e-218 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
GPFJAPFD_00204 5.6e-179 S CAAX protease self-immunity
GPFJAPFD_00205 1.7e-137 M Mechanosensitive ion channel
GPFJAPFD_00206 6.5e-229 MA20_36090 S Psort location Cytoplasmic, score 8.87
GPFJAPFD_00207 1.2e-227 MA20_36090 S Psort location Cytoplasmic, score 8.87
GPFJAPFD_00208 2.6e-126 K Bacterial regulatory proteins, tetR family
GPFJAPFD_00209 1.4e-231 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
GPFJAPFD_00210 5.2e-167 gnd 1.1.1.343, 1.1.1.44 G 6-phosphogluconate dehydrogenase, C-terminal domain
GPFJAPFD_00212 6e-228 gnuT EG GntP family permease
GPFJAPFD_00213 1.1e-77 gntK 2.7.1.12 F Shikimate kinase
GPFJAPFD_00214 1.9e-127 gntR K FCD
GPFJAPFD_00215 4.9e-230 yxiO S Vacuole effluxer Atg22 like
GPFJAPFD_00216 0.0 S Psort location Cytoplasmic, score 8.87
GPFJAPFD_00217 8.4e-30 rpmB J Ribosomal L28 family
GPFJAPFD_00218 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
GPFJAPFD_00219 6.5e-105 rsmD 2.1.1.171 L Conserved hypothetical protein 95
GPFJAPFD_00220 4.6e-150 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
GPFJAPFD_00221 3.6e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GPFJAPFD_00222 1.8e-34 CP_0960 S Belongs to the UPF0109 family
GPFJAPFD_00223 3.9e-54 rpsP J Belongs to the bacterial ribosomal protein bS16 family
GPFJAPFD_00224 2e-178 S Endonuclease/Exonuclease/phosphatase family
GPFJAPFD_00225 1.5e-265 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GPFJAPFD_00226 2.5e-295 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
GPFJAPFD_00227 1.6e-151 guaA1 6.3.5.2 F Peptidase C26
GPFJAPFD_00228 0.0 yjjK S ABC transporter
GPFJAPFD_00229 7.6e-97
GPFJAPFD_00230 5.7e-92 ilvN 2.2.1.6 E ACT domain
GPFJAPFD_00231 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
GPFJAPFD_00232 5.7e-136 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
GPFJAPFD_00233 1e-19 rpmF J Belongs to the bacterial ribosomal protein bL32 family
GPFJAPFD_00234 1.8e-113 yceD S Uncharacterized ACR, COG1399
GPFJAPFD_00235 8.5e-134
GPFJAPFD_00236 7.7e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GPFJAPFD_00237 3.2e-58 S Protein of unknown function (DUF3039)
GPFJAPFD_00238 1.1e-194 yghZ C Aldo/keto reductase family
GPFJAPFD_00239 2e-76 soxR K MerR, DNA binding
GPFJAPFD_00240 1.5e-118 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GPFJAPFD_00241 1.9e-138 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
GPFJAPFD_00242 3.8e-251 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GPFJAPFD_00243 2.4e-218 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
GPFJAPFD_00244 5.3e-221 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
GPFJAPFD_00247 1e-179 S Auxin Efflux Carrier
GPFJAPFD_00248 0.0 pgi 5.3.1.9 G Belongs to the GPI family
GPFJAPFD_00249 3e-60 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
GPFJAPFD_00250 1.1e-123 lepB 3.4.21.89 U Belongs to the peptidase S26 family
GPFJAPFD_00251 7.2e-138 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GPFJAPFD_00252 1.1e-127 V ATPases associated with a variety of cellular activities
GPFJAPFD_00253 2.5e-270 V Efflux ABC transporter, permease protein
GPFJAPFD_00254 2.7e-166 mdcF S Transporter, auxin efflux carrier (AEC) family protein
GPFJAPFD_00255 1.2e-227 dapE 3.5.1.18 E Peptidase dimerisation domain
GPFJAPFD_00256 1.9e-308 rne 3.1.26.12 J Ribonuclease E/G family
GPFJAPFD_00257 2.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
GPFJAPFD_00258 2.6e-39 rpmA J Ribosomal L27 protein
GPFJAPFD_00259 2.3e-311 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GPFJAPFD_00260 3e-204 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
GPFJAPFD_00261 3.3e-233 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
GPFJAPFD_00263 1.2e-32 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
GPFJAPFD_00264 1.1e-128 nusG K Participates in transcription elongation, termination and antitermination
GPFJAPFD_00265 2.3e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GPFJAPFD_00266 3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
GPFJAPFD_00267 5.9e-143 QT PucR C-terminal helix-turn-helix domain
GPFJAPFD_00268 0.0
GPFJAPFD_00269 1.3e-162 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
GPFJAPFD_00270 2.1e-79 bioY S BioY family
GPFJAPFD_00271 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
GPFJAPFD_00272 0.0 pccB I Carboxyl transferase domain
GPFJAPFD_00273 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
GPFJAPFD_00275 1.2e-82 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
GPFJAPFD_00276 0.0 ams 2.4.1.4, 3.2.1.1, 5.4.99.16 GH13 G Alpha amylase, catalytic domain
GPFJAPFD_00278 2.4e-116
GPFJAPFD_00279 1.7e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GPFJAPFD_00280 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
GPFJAPFD_00281 8.5e-91 lemA S LemA family
GPFJAPFD_00282 0.0 S Predicted membrane protein (DUF2207)
GPFJAPFD_00283 8.3e-170 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
GPFJAPFD_00284 2.4e-297 yegQ O Peptidase family U32 C-terminal domain
GPFJAPFD_00285 4.1e-184 yfiH Q Multi-copper polyphenol oxidoreductase laccase
GPFJAPFD_00286 5.5e-144 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
GPFJAPFD_00287 3.4e-126 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GPFJAPFD_00288 1.3e-58 D nuclear chromosome segregation
GPFJAPFD_00289 5.1e-267 pepC 3.4.22.40 E Peptidase C1-like family
GPFJAPFD_00290 1.1e-211 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GPFJAPFD_00291 1.3e-221 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GPFJAPFD_00292 2.8e-123 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GPFJAPFD_00293 1.3e-220 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
GPFJAPFD_00294 3.4e-129 KT Transcriptional regulatory protein, C terminal
GPFJAPFD_00295 3.9e-196 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
GPFJAPFD_00296 1.5e-164 pstC P probably responsible for the translocation of the substrate across the membrane
GPFJAPFD_00297 4e-168 pstA P Phosphate transport system permease
GPFJAPFD_00298 3.6e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GPFJAPFD_00299 2.3e-143 P Zinc-uptake complex component A periplasmic
GPFJAPFD_00300 1.3e-246 pbuO S Permease family
GPFJAPFD_00301 1.1e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GPFJAPFD_00302 2.4e-36 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
GPFJAPFD_00303 1.1e-176 T Forkhead associated domain
GPFJAPFD_00304 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
GPFJAPFD_00305 4.8e-36
GPFJAPFD_00306 1.9e-92 flgA NO SAF
GPFJAPFD_00307 6.1e-30 fmdB S Putative regulatory protein
GPFJAPFD_00308 2.4e-100 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
GPFJAPFD_00309 9.2e-124 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
GPFJAPFD_00310 1.6e-147
GPFJAPFD_00311 2.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GPFJAPFD_00315 5.5e-25 rpmG J Ribosomal protein L33
GPFJAPFD_00316 6.4e-205 murB 1.3.1.98 M Cell wall formation
GPFJAPFD_00317 1.3e-266 E aromatic amino acid transport protein AroP K03293
GPFJAPFD_00318 8.3e-59 fdxA C 4Fe-4S binding domain
GPFJAPFD_00319 4e-212 dapC E Aminotransferase class I and II
GPFJAPFD_00320 2.2e-54 E Bacterial extracellular solute-binding proteins, family 5 Middle
GPFJAPFD_00321 3.9e-248 E Bacterial extracellular solute-binding proteins, family 5 Middle
GPFJAPFD_00322 3.1e-181 EP Binding-protein-dependent transport system inner membrane component
GPFJAPFD_00323 1.1e-140 EP Binding-protein-dependent transport system inner membrane component
GPFJAPFD_00324 5.1e-156 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
GPFJAPFD_00325 2.8e-151 dppF E ABC transporter
GPFJAPFD_00326 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
GPFJAPFD_00327 0.0 G Psort location Cytoplasmic, score 8.87
GPFJAPFD_00328 1.4e-233 3.2.1.156 GH8 G CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
GPFJAPFD_00329 0.0 G candidate polyfunctional acetylxylan esterase b-xylosidase A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein K01238
GPFJAPFD_00330 2.5e-296 CE10 I Belongs to the type-B carboxylesterase lipase family
GPFJAPFD_00332 9.7e-223 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GPFJAPFD_00333 3e-251 M Bacterial capsule synthesis protein PGA_cap
GPFJAPFD_00334 7.9e-185 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GPFJAPFD_00335 8.1e-114 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
GPFJAPFD_00336 7.9e-110
GPFJAPFD_00337 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
GPFJAPFD_00338 2.4e-80 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GPFJAPFD_00339 3.4e-67 rpsI J Belongs to the universal ribosomal protein uS9 family
GPFJAPFD_00340 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
GPFJAPFD_00341 2.8e-177 tdh 1.1.1.14 C Zinc-binding dehydrogenase
GPFJAPFD_00342 3.2e-226 EGP Major facilitator Superfamily
GPFJAPFD_00343 1.6e-75 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GPFJAPFD_00344 1e-215 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
GPFJAPFD_00345 1.3e-235 EGP Major facilitator Superfamily
GPFJAPFD_00346 9.5e-197 Z012_01000 1.1.1.14, 1.1.1.9 C Zinc-binding dehydrogenase
GPFJAPFD_00347 2.1e-182 rhaR_1 K helix_turn_helix, arabinose operon control protein
GPFJAPFD_00348 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
GPFJAPFD_00349 5.2e-50 rpsJ J Involved in the binding of tRNA to the ribosomes
GPFJAPFD_00350 2.3e-116 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GPFJAPFD_00351 1.4e-116 rplD J Forms part of the polypeptide exit tunnel
GPFJAPFD_00352 6.8e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
GPFJAPFD_00353 6.1e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GPFJAPFD_00354 1.3e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GPFJAPFD_00355 1.9e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GPFJAPFD_00356 1e-97 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GPFJAPFD_00357 1.7e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GPFJAPFD_00358 5e-38 rpmC J Belongs to the universal ribosomal protein uL29 family
GPFJAPFD_00359 4.9e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GPFJAPFD_00360 3e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GPFJAPFD_00361 8.7e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GPFJAPFD_00362 7.5e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GPFJAPFD_00363 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GPFJAPFD_00364 5.5e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GPFJAPFD_00365 3.8e-96 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GPFJAPFD_00366 3.3e-59 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GPFJAPFD_00367 1.2e-92 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GPFJAPFD_00368 3.4e-25 rpmD J Ribosomal protein L30p/L7e
GPFJAPFD_00369 3.7e-73 rplO J binds to the 23S rRNA
GPFJAPFD_00370 4.5e-239 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
GPFJAPFD_00371 1.2e-97 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
GPFJAPFD_00372 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GPFJAPFD_00373 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
GPFJAPFD_00374 3.3e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GPFJAPFD_00375 1.9e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GPFJAPFD_00376 4.7e-185 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GPFJAPFD_00377 1.3e-66 rplQ J Ribosomal protein L17
GPFJAPFD_00378 4.4e-183 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
GPFJAPFD_00380 2e-102
GPFJAPFD_00381 6.1e-191 nusA K Participates in both transcription termination and antitermination
GPFJAPFD_00382 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GPFJAPFD_00383 2.2e-69 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GPFJAPFD_00384 5.1e-188 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GPFJAPFD_00385 5.2e-218 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
GPFJAPFD_00386 4.1e-251 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GPFJAPFD_00387 3.8e-108
GPFJAPFD_00389 2.4e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GPFJAPFD_00390 1.4e-215 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GPFJAPFD_00391 3e-251 T GHKL domain
GPFJAPFD_00392 7.2e-152 T LytTr DNA-binding domain
GPFJAPFD_00393 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
GPFJAPFD_00394 0.0 crr G pts system, glucose-specific IIABC component
GPFJAPFD_00395 2.8e-157 arbG K CAT RNA binding domain
GPFJAPFD_00396 9.8e-200 I Diacylglycerol kinase catalytic domain
GPFJAPFD_00397 1.2e-247 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GPFJAPFD_00399 2.1e-188 yegU O ADP-ribosylglycohydrolase
GPFJAPFD_00400 8.3e-190 yegV G pfkB family carbohydrate kinase
GPFJAPFD_00401 1.1e-270 U Permease for cytosine/purines, uracil, thiamine, allantoin
GPFJAPFD_00402 7.4e-103 Q Isochorismatase family
GPFJAPFD_00403 2.3e-214 S Choline/ethanolamine kinase
GPFJAPFD_00404 2.5e-275 eat E Amino acid permease
GPFJAPFD_00405 5.3e-264 gabT 2.6.1.19, 2.6.1.22 H Aminotransferase class-III
GPFJAPFD_00406 6.8e-139 yidP K UTRA
GPFJAPFD_00407 5.6e-121 degU K helix_turn_helix, Lux Regulon
GPFJAPFD_00408 3.2e-268 tcsS3 KT PspC domain
GPFJAPFD_00409 2.9e-146 pspC KT PspC domain
GPFJAPFD_00410 1e-91
GPFJAPFD_00411 6.7e-116 S Protein of unknown function (DUF4125)
GPFJAPFD_00412 0.0 S Domain of unknown function (DUF4037)
GPFJAPFD_00413 7.5e-214 araJ EGP Major facilitator Superfamily
GPFJAPFD_00415 0.0 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
GPFJAPFD_00416 1.3e-190 K helix_turn _helix lactose operon repressor
GPFJAPFD_00417 7.4e-250 G Psort location CytoplasmicMembrane, score 10.00
GPFJAPFD_00418 4.1e-99 S Serine aminopeptidase, S33
GPFJAPFD_00419 8.6e-207 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
GPFJAPFD_00420 3e-139 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GPFJAPFD_00421 0.0 4.2.1.53 S MCRA family
GPFJAPFD_00422 7.4e-89 phoU P Plays a role in the regulation of phosphate uptake
GPFJAPFD_00423 3.1e-215 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GPFJAPFD_00424 6.2e-41
GPFJAPFD_00425 8.2e-218 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
GPFJAPFD_00426 1.3e-165 usp 3.5.1.28 CBM50 S CHAP domain
GPFJAPFD_00427 1.3e-79 M NlpC/P60 family
GPFJAPFD_00428 1.3e-190 T Universal stress protein family
GPFJAPFD_00429 7.7e-73 attW O OsmC-like protein
GPFJAPFD_00430 3.8e-181 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GPFJAPFD_00431 6.4e-130 folA 1.5.1.3 H dihydrofolate reductase
GPFJAPFD_00432 3.6e-85 ptpA 3.1.3.48 T low molecular weight
GPFJAPFD_00434 9e-200 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
GPFJAPFD_00435 5.7e-160 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
GPFJAPFD_00439 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
GPFJAPFD_00440 3e-162
GPFJAPFD_00441 0.0 S Uncharacterised protein conserved in bacteria (DUF2194)
GPFJAPFD_00442 1.9e-104 pelF GT4 M Domain of unknown function (DUF3492)
GPFJAPFD_00443 6.8e-124 pelF GT4 M Domain of unknown function (DUF3492)
GPFJAPFD_00444 2.1e-285 pelG S Putative exopolysaccharide Exporter (EPS-E)
GPFJAPFD_00445 0.0 cotH M CotH kinase protein
GPFJAPFD_00446 4.1e-158 P VTC domain
GPFJAPFD_00447 2.5e-110 S Domain of unknown function (DUF4956)
GPFJAPFD_00448 0.0 yliE T Putative diguanylate phosphodiesterase
GPFJAPFD_00449 1.8e-204 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
GPFJAPFD_00450 5.5e-180 3.4.14.13 M Glycosyltransferase like family 2
GPFJAPFD_00451 1.3e-237 S AI-2E family transporter
GPFJAPFD_00452 6.3e-232 epsG M Glycosyl transferase family 21
GPFJAPFD_00453 1.1e-232 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
GPFJAPFD_00454 3.3e-200 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
GPFJAPFD_00455 3.9e-99 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
GPFJAPFD_00456 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GPFJAPFD_00457 9.6e-115 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
GPFJAPFD_00458 9e-156 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
GPFJAPFD_00459 2.6e-259 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
GPFJAPFD_00460 1.8e-93 S Protein of unknown function (DUF3180)
GPFJAPFD_00461 5e-165 tesB I Thioesterase-like superfamily
GPFJAPFD_00462 0.0 yjjK S ATP-binding cassette protein, ChvD family
GPFJAPFD_00463 2.2e-181 V Beta-lactamase
GPFJAPFD_00464 9.3e-74 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
GPFJAPFD_00465 1.5e-155 ribD 1.1.1.193, 3.5.4.26 H Cytidine and deoxycytidylate deaminase zinc-binding region
GPFJAPFD_00467 2.5e-77 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
GPFJAPFD_00468 5.8e-296 S Amidohydrolase family
GPFJAPFD_00469 8.3e-251 metY 2.5.1.49 H Psort location Cytoplasmic, score 9.98
GPFJAPFD_00470 3e-267 xylA 5.3.1.5 G Belongs to the xylose isomerase family
GPFJAPFD_00471 0.0 3.2.1.37, 3.2.1.55 GH43,GH51 G Belongs to the glycosyl hydrolase 43 family
GPFJAPFD_00472 9.1e-184 K Bacterial regulatory proteins, lacI family
GPFJAPFD_00473 9.4e-239 msmE G ABC transporter periplasmic binding protein YcjN precursor K02027
GPFJAPFD_00474 1.7e-185 MA20_14025 U Binding-protein-dependent transport system inner membrane component
GPFJAPFD_00475 2.4e-164 MA20_14020 P Binding-protein-dependent transport system inner membrane component
GPFJAPFD_00476 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
GPFJAPFD_00477 0.0 3.1.1.53 G Glycosyl hydrolase family 2, sugar binding domain protein
GPFJAPFD_00478 4.8e-08 CE10 I Belongs to the type-B carboxylesterase lipase family
GPFJAPFD_00479 2.8e-106 lacA 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
GPFJAPFD_00480 2.5e-286 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
GPFJAPFD_00481 1.3e-224 xylR GK ROK family
GPFJAPFD_00483 1.5e-35 rpmE J Binds the 23S rRNA
GPFJAPFD_00484 1.4e-187 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GPFJAPFD_00485 2.7e-171 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
GPFJAPFD_00486 7.8e-219 livK E Receptor family ligand binding region
GPFJAPFD_00487 9.5e-156 U Belongs to the binding-protein-dependent transport system permease family
GPFJAPFD_00488 3.3e-195 livM U Belongs to the binding-protein-dependent transport system permease family
GPFJAPFD_00489 4.8e-151 E Branched-chain amino acid ATP-binding cassette transporter
GPFJAPFD_00490 1.9e-124 livF E ATPases associated with a variety of cellular activities
GPFJAPFD_00491 3.8e-114 ywlC 2.7.7.87 J Belongs to the SUA5 family
GPFJAPFD_00492 1.3e-194 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
GPFJAPFD_00493 2.7e-288 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
GPFJAPFD_00494 3.1e-121 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
GPFJAPFD_00495 2.5e-161 supH S Sucrose-6F-phosphate phosphohydrolase
GPFJAPFD_00496 1e-270 recD2 3.6.4.12 L PIF1-like helicase
GPFJAPFD_00497 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
GPFJAPFD_00498 4e-98 L Single-strand binding protein family
GPFJAPFD_00499 0.0 pepO 3.4.24.71 O Peptidase family M13
GPFJAPFD_00500 1.6e-151 map 3.4.11.18 E Methionine aminopeptidase
GPFJAPFD_00501 2.1e-249 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
GPFJAPFD_00502 1.3e-142 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
GPFJAPFD_00503 1.2e-80 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GPFJAPFD_00504 1.1e-190 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
GPFJAPFD_00505 2.3e-168 ftsE D Cell division ATP-binding protein FtsE
GPFJAPFD_00506 3.4e-161 ftsX D Part of the ABC transporter FtsEX involved in cellular division
GPFJAPFD_00507 8.5e-148 usp 3.5.1.28 CBM50 D CHAP domain protein
GPFJAPFD_00508 2e-77 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
GPFJAPFD_00509 2.9e-147 pknD ET ABC transporter, substrate-binding protein, family 3
GPFJAPFD_00510 2.4e-61 pknD ET ABC transporter, substrate-binding protein, family 3
GPFJAPFD_00511 3.2e-151 pknD ET ABC transporter, substrate-binding protein, family 3
GPFJAPFD_00512 2.2e-126 yecS E Binding-protein-dependent transport system inner membrane component
GPFJAPFD_00513 8.5e-145 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
GPFJAPFD_00514 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
GPFJAPFD_00515 6.8e-144 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
GPFJAPFD_00516 5.3e-229 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
GPFJAPFD_00517 1.4e-189 K Periplasmic binding protein domain
GPFJAPFD_00518 1.2e-163 G Binding-protein-dependent transport system inner membrane component
GPFJAPFD_00519 1e-163 G ABC transporter permease
GPFJAPFD_00520 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GPFJAPFD_00521 0.0 abfA1 3.2.1.55 GH51 G arabinose metabolic process
GPFJAPFD_00522 2.2e-246 G Bacterial extracellular solute-binding protein
GPFJAPFD_00523 1.5e-274 G Bacterial extracellular solute-binding protein
GPFJAPFD_00524 2.6e-143 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
GPFJAPFD_00525 7e-242 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GPFJAPFD_00526 4.6e-294 E ABC transporter, substrate-binding protein, family 5
GPFJAPFD_00527 1.1e-165 P Binding-protein-dependent transport system inner membrane component
GPFJAPFD_00528 8.9e-138 EP Binding-protein-dependent transport system inner membrane component
GPFJAPFD_00529 1.2e-135 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
GPFJAPFD_00530 4e-139 sapF E ATPases associated with a variety of cellular activities
GPFJAPFD_00531 5.8e-191 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
GPFJAPFD_00532 3.8e-218 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
GPFJAPFD_00533 0.0 macB_2 V ATPases associated with a variety of cellular activities
GPFJAPFD_00534 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
GPFJAPFD_00535 5.1e-92 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
GPFJAPFD_00536 1e-101 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GPFJAPFD_00537 4e-270 yhdG E aromatic amino acid transport protein AroP K03293
GPFJAPFD_00538 5.9e-307 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GPFJAPFD_00539 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
GPFJAPFD_00540 8.1e-216 ybiR P Citrate transporter
GPFJAPFD_00542 3.1e-171 ydcZ S Putative inner membrane exporter, YdcZ
GPFJAPFD_00544 0.0 tetP J Elongation factor G, domain IV
GPFJAPFD_00548 1.3e-113 K acetyltransferase
GPFJAPFD_00549 1.1e-108 papP E Binding-protein-dependent transport system inner membrane component
GPFJAPFD_00550 2.3e-119 E Binding-protein-dependent transport system inner membrane component
GPFJAPFD_00551 6.5e-151 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
GPFJAPFD_00552 1.5e-142 cjaA ET Bacterial periplasmic substrate-binding proteins
GPFJAPFD_00553 2e-199 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GPFJAPFD_00554 2.3e-151 metQ M NLPA lipoprotein
GPFJAPFD_00555 6.3e-180 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GPFJAPFD_00556 2.4e-97 metI P Psort location CytoplasmicMembrane, score 9.99
GPFJAPFD_00557 5.9e-219 mtnE 2.6.1.83 E Aminotransferase class I and II
GPFJAPFD_00558 2.5e-13 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
GPFJAPFD_00559 3.2e-75 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
GPFJAPFD_00560 2.8e-15 P Belongs to the ABC transporter superfamily
GPFJAPFD_00561 1.4e-43 XAC3035 O Glutaredoxin
GPFJAPFD_00562 3.1e-127 XK27_08050 O prohibitin homologues
GPFJAPFD_00563 1.7e-13 S Domain of unknown function (DUF4143)
GPFJAPFD_00564 4.3e-75
GPFJAPFD_00565 9.6e-135 V ATPases associated with a variety of cellular activities
GPFJAPFD_00566 4.1e-145 M Conserved repeat domain
GPFJAPFD_00567 9.8e-256 macB_8 V MacB-like periplasmic core domain
GPFJAPFD_00568 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GPFJAPFD_00569 1.2e-183 adh3 C Zinc-binding dehydrogenase
GPFJAPFD_00570 1.1e-84 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
GPFJAPFD_00571 2.9e-226 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GPFJAPFD_00572 2.3e-89 zur P Belongs to the Fur family
GPFJAPFD_00573 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
GPFJAPFD_00574 4.2e-203 psuK 2.7.1.15, 2.7.1.45, 2.7.1.83 G pfkB family carbohydrate kinase
GPFJAPFD_00575 9.1e-189 yeiI 2.7.1.15, 2.7.1.45, 2.7.1.83 G pfkB family carbohydrate kinase
GPFJAPFD_00576 3.3e-129 trpF 5.3.1.24 E N-(5'phosphoribosyl)anthranilate (PRA) isomerase
GPFJAPFD_00577 1.1e-214 1.1.1.1 C Iron-containing alcohol dehydrogenase
GPFJAPFD_00578 1.1e-183 rihB 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
GPFJAPFD_00579 2.1e-247 EGP Major facilitator Superfamily
GPFJAPFD_00580 3.7e-235 purD 6.3.4.13 F Belongs to the GARS family
GPFJAPFD_00581 8.3e-185 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
GPFJAPFD_00582 1e-284 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
GPFJAPFD_00583 6.5e-309 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
GPFJAPFD_00584 4.6e-35
GPFJAPFD_00585 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
GPFJAPFD_00586 4.3e-138 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
GPFJAPFD_00587 6.7e-229 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
GPFJAPFD_00588 1.5e-225 M Glycosyl transferase 4-like domain
GPFJAPFD_00589 1.1e-197 ltaE 4.1.2.48 E Beta-eliminating lyase
GPFJAPFD_00591 1.1e-187 yocS S SBF-like CPA transporter family (DUF4137)
GPFJAPFD_00593 1.2e-61 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GPFJAPFD_00594 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
GPFJAPFD_00595 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GPFJAPFD_00596 9.5e-233 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GPFJAPFD_00597 2e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GPFJAPFD_00598 1.8e-75 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GPFJAPFD_00599 1.1e-239 carA 6.3.5.5 F Belongs to the CarA family
GPFJAPFD_00600 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
GPFJAPFD_00601 2.1e-171 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
GPFJAPFD_00602 1.2e-106 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
GPFJAPFD_00604 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
GPFJAPFD_00605 1.4e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
GPFJAPFD_00606 4.2e-228 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GPFJAPFD_00607 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GPFJAPFD_00608 2.7e-134 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GPFJAPFD_00609 7e-178 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GPFJAPFD_00610 1.6e-123 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
GPFJAPFD_00611 4.4e-283 arc O AAA ATPase forming ring-shaped complexes
GPFJAPFD_00612 1.6e-302 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
GPFJAPFD_00613 3.3e-160 hisN 3.1.3.25 G Inositol monophosphatase family
GPFJAPFD_00614 1.4e-24 pup S Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
GPFJAPFD_00615 6.7e-281 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
GPFJAPFD_00616 9.7e-141 C FMN binding
GPFJAPFD_00617 1.8e-57
GPFJAPFD_00618 1.4e-41 hup L Belongs to the bacterial histone-like protein family
GPFJAPFD_00619 0.0 S Lysylphosphatidylglycerol synthase TM region
GPFJAPFD_00620 1.4e-278 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
GPFJAPFD_00621 1.7e-276 S PGAP1-like protein
GPFJAPFD_00622 5.6e-53
GPFJAPFD_00623 3.2e-61
GPFJAPFD_00624 5e-182 S von Willebrand factor (vWF) type A domain
GPFJAPFD_00625 1.6e-191 S von Willebrand factor (vWF) type A domain
GPFJAPFD_00626 3.6e-91
GPFJAPFD_00627 2.3e-173 S Protein of unknown function DUF58
GPFJAPFD_00628 4e-182 moxR S ATPase family associated with various cellular activities (AAA)
GPFJAPFD_00629 4.4e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GPFJAPFD_00630 8.5e-77 S LytR cell envelope-related transcriptional attenuator
GPFJAPFD_00631 8.7e-290 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
GPFJAPFD_00633 6.6e-124
GPFJAPFD_00634 6.8e-133 KT Response regulator receiver domain protein
GPFJAPFD_00635 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GPFJAPFD_00636 4.5e-67 cspB K 'Cold-shock' DNA-binding domain
GPFJAPFD_00637 2.6e-182 S Protein of unknown function (DUF3027)
GPFJAPFD_00638 4.6e-188 uspA T Belongs to the universal stress protein A family
GPFJAPFD_00639 0.0 clpC O ATPase family associated with various cellular activities (AAA)
GPFJAPFD_00640 4.4e-255 codA 3.5.4.1, 3.5.4.21 F Amidohydrolase family
GPFJAPFD_00641 3.4e-283 purR QT Purine catabolism regulatory protein-like family
GPFJAPFD_00642 5e-246 proP EGP Sugar (and other) transporter
GPFJAPFD_00643 6e-140 3.5.2.10 S Creatinine amidohydrolase
GPFJAPFD_00644 2.6e-216 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
GPFJAPFD_00645 5.3e-251 hisS 6.1.1.21 J Histidyl-tRNA synthetase
GPFJAPFD_00646 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
GPFJAPFD_00647 7.1e-281 glnP E Binding-protein-dependent transport system inner membrane component
GPFJAPFD_00648 6.7e-139 glnQ 3.6.3.21 E ATPases associated with a variety of cellular activities
GPFJAPFD_00649 6.2e-137 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
GPFJAPFD_00650 1.5e-152 gluB ET Belongs to the bacterial solute-binding protein 3 family
GPFJAPFD_00651 1.8e-111 gluC E Binding-protein-dependent transport system inner membrane component
GPFJAPFD_00652 1.7e-199 gluD E Binding-protein-dependent transport system inner membrane component
GPFJAPFD_00653 4.3e-191 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
GPFJAPFD_00654 0.0 L DEAD DEAH box helicase
GPFJAPFD_00655 2e-250 rarA L Recombination factor protein RarA
GPFJAPFD_00656 1.1e-74 KT Transcriptional regulatory protein, C terminal
GPFJAPFD_00657 3.2e-46 KT Transcriptional regulatory protein, C terminal
GPFJAPFD_00658 3.5e-286 mtrB 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
GPFJAPFD_00659 0.0 lpqB S Lipoprotein LpqB beta-propeller domain
GPFJAPFD_00660 2.4e-165 G Periplasmic binding protein domain
GPFJAPFD_00661 6e-288 ytfR 3.6.3.17 G ATPases associated with a variety of cellular activities
GPFJAPFD_00662 1.5e-181 ytfT U Branched-chain amino acid transport system / permease component
GPFJAPFD_00663 1.2e-172 yjfF U Branched-chain amino acid transport system / permease component
GPFJAPFD_00664 9e-252 EGP Major facilitator Superfamily
GPFJAPFD_00665 2.1e-310 E ABC transporter, substrate-binding protein, family 5
GPFJAPFD_00666 1e-113 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GPFJAPFD_00667 8.6e-125 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GPFJAPFD_00668 6.1e-241 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GPFJAPFD_00671 3.9e-246 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
GPFJAPFD_00672 4.8e-117 safC S O-methyltransferase
GPFJAPFD_00673 5.2e-178 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
GPFJAPFD_00674 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
GPFJAPFD_00675 1e-254 dprA 5.99.1.2 LU DNA recombination-mediator protein A
GPFJAPFD_00676 1e-292 comM O Magnesium chelatase, subunit ChlI C-terminal
GPFJAPFD_00677 1.5e-82 yraN L Belongs to the UPF0102 family
GPFJAPFD_00678 3.3e-166 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
GPFJAPFD_00679 1.3e-251 metY 2.5.1.49 E Aminotransferase class-V
GPFJAPFD_00680 4.3e-95 XK27_01265 S ECF-type riboflavin transporter, S component
GPFJAPFD_00681 5.1e-306 3.6.3.24 P AAA domain, putative AbiEii toxin, Type IV TA system
GPFJAPFD_00682 6.9e-150 P Cobalt transport protein
GPFJAPFD_00683 8.2e-193 K helix_turn_helix ASNC type
GPFJAPFD_00684 5.1e-142 V ABC transporter, ATP-binding protein
GPFJAPFD_00685 0.0 MV MacB-like periplasmic core domain
GPFJAPFD_00686 4.2e-130 K helix_turn_helix, Lux Regulon
GPFJAPFD_00687 0.0 tcsS2 T Histidine kinase
GPFJAPFD_00688 2.4e-264 pip 3.4.11.5 S alpha/beta hydrolase fold
GPFJAPFD_00689 1.4e-142 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GPFJAPFD_00690 3.9e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
GPFJAPFD_00691 3.4e-17 yccF S Inner membrane component domain
GPFJAPFD_00692 5.9e-12
GPFJAPFD_00693 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
GPFJAPFD_00694 7e-85 feoB P transporter of a GTP-driven Fe(2 ) uptake system
GPFJAPFD_00695 3.9e-94
GPFJAPFD_00696 4.7e-175 MA20_14895 S Conserved hypothetical protein 698
GPFJAPFD_00697 2.5e-186 C Na H antiporter family protein
GPFJAPFD_00698 1.5e-156 korD 1.2.7.3 C Domain of unknown function (DUF362)
GPFJAPFD_00699 4.9e-79 2.7.1.48 F uridine kinase
GPFJAPFD_00700 8.5e-70 S ECF transporter, substrate-specific component
GPFJAPFD_00701 1.3e-143 S Sulfite exporter TauE/SafE
GPFJAPFD_00702 1.5e-135 K helix_turn_helix, arabinose operon control protein
GPFJAPFD_00703 1.4e-155 3.1.3.73 G Phosphoglycerate mutase family
GPFJAPFD_00704 6.4e-227 rutG F Permease family
GPFJAPFD_00705 3.8e-128 S Enoyl-(Acyl carrier protein) reductase
GPFJAPFD_00706 1.4e-276 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
GPFJAPFD_00707 1.8e-134 ybbM V Uncharacterised protein family (UPF0014)
GPFJAPFD_00708 9.2e-142 ybbL V ATPases associated with a variety of cellular activities
GPFJAPFD_00709 3.8e-241 S Putative esterase
GPFJAPFD_00710 0.0 lysX S Uncharacterised conserved protein (DUF2156)
GPFJAPFD_00711 3.4e-277 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GPFJAPFD_00712 5.3e-147 S Belongs to the short-chain dehydrogenases reductases (SDR) family
GPFJAPFD_00713 3.1e-236 patB 4.4.1.8 E Aminotransferase, class I II
GPFJAPFD_00714 3.9e-303 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GPFJAPFD_00715 2.6e-180 opcA G Glucose-6-phosphate dehydrogenase subunit
GPFJAPFD_00716 2.4e-147 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
GPFJAPFD_00717 1.2e-310 EGP Major Facilitator Superfamily
GPFJAPFD_00718 1.8e-81 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GPFJAPFD_00719 3.7e-82 M Protein of unknown function (DUF3737)
GPFJAPFD_00720 2.3e-142 azlC E AzlC protein
GPFJAPFD_00721 1.6e-52 azlD E Branched-chain amino acid transport protein (AzlD)
GPFJAPFD_00722 0.0 cstA T 5TM C-terminal transporter carbon starvation CstA
GPFJAPFD_00723 6.2e-40 ybdD S Selenoprotein, putative
GPFJAPFD_00724 3.8e-176 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
GPFJAPFD_00725 0.0 S Uncharacterised protein family (UPF0182)
GPFJAPFD_00726 3.6e-99 2.3.1.183 M Acetyltransferase (GNAT) domain
GPFJAPFD_00727 1.7e-113 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
GPFJAPFD_00728 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GPFJAPFD_00729 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GPFJAPFD_00730 2e-71 divIC D Septum formation initiator
GPFJAPFD_00731 2e-103 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
GPFJAPFD_00732 4.4e-183 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
GPFJAPFD_00734 1.2e-70 P Major Facilitator Superfamily
GPFJAPFD_00736 1.5e-90
GPFJAPFD_00737 3.2e-283 sdaA 4.3.1.17 E Serine dehydratase alpha chain
GPFJAPFD_00738 2.6e-73 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
GPFJAPFD_00739 2.6e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GPFJAPFD_00740 1e-143 yplQ S Haemolysin-III related
GPFJAPFD_00741 6e-277 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GPFJAPFD_00742 1.9e-46 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
GPFJAPFD_00743 0.0 D FtsK/SpoIIIE family
GPFJAPFD_00744 3.4e-169 K Cell envelope-related transcriptional attenuator domain
GPFJAPFD_00746 5.7e-208 K Cell envelope-related transcriptional attenuator domain
GPFJAPFD_00747 3.4e-54 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
GPFJAPFD_00748 0.0 S Glycosyl transferase, family 2
GPFJAPFD_00749 8.7e-223
GPFJAPFD_00750 1.5e-71 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
GPFJAPFD_00751 1.1e-152 cof 5.2.1.8 T Eukaryotic phosphomannomutase
GPFJAPFD_00752 2.5e-138 ctsW S Phosphoribosyl transferase domain
GPFJAPFD_00753 6.8e-188 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GPFJAPFD_00754 2e-129 T Response regulator receiver domain protein
GPFJAPFD_00755 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
GPFJAPFD_00756 3e-102 carD K CarD-like/TRCF domain
GPFJAPFD_00757 1.7e-87 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
GPFJAPFD_00758 1e-140 znuB U ABC 3 transport family
GPFJAPFD_00759 2e-160 znuC P ATPases associated with a variety of cellular activities
GPFJAPFD_00760 1.5e-171 P Zinc-uptake complex component A periplasmic
GPFJAPFD_00761 1.9e-161 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GPFJAPFD_00762 8.3e-255 rpsA J Ribosomal protein S1
GPFJAPFD_00763 9.1e-116 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GPFJAPFD_00764 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
GPFJAPFD_00765 5.4e-14 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
GPFJAPFD_00766 2.8e-157 terC P Integral membrane protein, TerC family
GPFJAPFD_00767 2.5e-305 pyk 2.7.1.40 G Pyruvate kinase
GPFJAPFD_00769 3e-187 hbd2 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
GPFJAPFD_00770 2.2e-162 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
GPFJAPFD_00771 9.4e-101 pdtaR T Response regulator receiver domain protein
GPFJAPFD_00772 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GPFJAPFD_00773 9.9e-174 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
GPFJAPFD_00774 1.5e-123 3.6.1.13 L NUDIX domain
GPFJAPFD_00775 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
GPFJAPFD_00776 1.4e-212 ykiI
GPFJAPFD_00778 8.9e-256 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
GPFJAPFD_00779 3.8e-70 yvbK 3.1.3.25 K Acetyltransferase (GNAT) domain
GPFJAPFD_00780 4.9e-75 yiaC K Acetyltransferase (GNAT) domain
GPFJAPFD_00781 5.1e-303 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
GPFJAPFD_00782 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
GPFJAPFD_00783 5.6e-300 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
GPFJAPFD_00784 1.7e-232 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GPFJAPFD_00785 0.0 yrhL I Psort location CytoplasmicMembrane, score 9.99
GPFJAPFD_00786 2.8e-244 pbuX F Permease family
GPFJAPFD_00787 1.5e-106 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
GPFJAPFD_00788 0.0 pcrA 3.6.4.12 L DNA helicase
GPFJAPFD_00789 1.7e-61 S Domain of unknown function (DUF4418)
GPFJAPFD_00790 1.4e-215 V FtsX-like permease family
GPFJAPFD_00791 1.9e-150 lolD V ABC transporter
GPFJAPFD_00792 3.1e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GPFJAPFD_00793 3.4e-51 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
GPFJAPFD_00794 5.6e-129 pgm3 G Phosphoglycerate mutase family
GPFJAPFD_00795 3.4e-59 WQ51_05790 S Bacterial protein of unknown function (DUF948)
GPFJAPFD_00796 2.5e-36
GPFJAPFD_00797 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GPFJAPFD_00798 2.7e-82 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GPFJAPFD_00799 8.9e-191 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GPFJAPFD_00800 9.3e-57 3.4.23.43 S Type IV leader peptidase family
GPFJAPFD_00801 1.3e-221 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
GPFJAPFD_00802 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
GPFJAPFD_00803 4.9e-81 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
GPFJAPFD_00804 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 M Aamy_C
GPFJAPFD_00805 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
GPFJAPFD_00806 0.0 S L,D-transpeptidase catalytic domain
GPFJAPFD_00807 2.1e-290 sufB O FeS assembly protein SufB
GPFJAPFD_00808 1e-234 sufD O FeS assembly protein SufD
GPFJAPFD_00809 1e-142 sufC O FeS assembly ATPase SufC
GPFJAPFD_00810 5.5e-239 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GPFJAPFD_00811 7.5e-100 iscU C SUF system FeS assembly protein, NifU family
GPFJAPFD_00812 2.7e-108 yitW S Iron-sulfur cluster assembly protein
GPFJAPFD_00813 8.1e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
GPFJAPFD_00814 3.5e-163 spoU 2.1.1.185 J SpoU rRNA Methylase family
GPFJAPFD_00816 2e-138 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
GPFJAPFD_00817 1.8e-56 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
GPFJAPFD_00818 5.9e-208 phoH T PhoH-like protein
GPFJAPFD_00819 9.4e-103 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GPFJAPFD_00820 1.1e-251 corC S CBS domain
GPFJAPFD_00821 1.3e-179 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GPFJAPFD_00822 0.0 fadD 6.2.1.3 I AMP-binding enzyme
GPFJAPFD_00823 2.9e-202 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
GPFJAPFD_00824 1.6e-43 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
GPFJAPFD_00825 3.5e-258 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
GPFJAPFD_00826 4.2e-269 S Psort location Cytoplasmic, score 8.87
GPFJAPFD_00828 5.1e-224 G Transmembrane secretion effector
GPFJAPFD_00829 5.4e-121 K Bacterial regulatory proteins, tetR family
GPFJAPFD_00830 1.1e-39 nrdH O Glutaredoxin
GPFJAPFD_00831 3.3e-74 nrdI F Probably involved in ribonucleotide reductase function
GPFJAPFD_00832 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GPFJAPFD_00834 3.1e-189 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GPFJAPFD_00835 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
GPFJAPFD_00836 1.3e-29 EGP Major facilitator Superfamily
GPFJAPFD_00837 1.3e-25 yhjX EGP Major facilitator Superfamily
GPFJAPFD_00838 3.8e-195 S alpha beta
GPFJAPFD_00839 1e-89 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
GPFJAPFD_00840 1.7e-93 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GPFJAPFD_00841 3.2e-54 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GPFJAPFD_00842 2e-58 K Acetyltransferase (GNAT) domain
GPFJAPFD_00844 1.9e-227 ilvE 2.6.1.42 E Amino-transferase class IV
GPFJAPFD_00845 1.1e-133 S UPF0126 domain
GPFJAPFD_00846 6.4e-33 rpsT J Binds directly to 16S ribosomal RNA
GPFJAPFD_00847 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
GPFJAPFD_00848 3e-234 hemN H Involved in the biosynthesis of porphyrin-containing compound
GPFJAPFD_00849 1.4e-144 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
GPFJAPFD_00850 6.9e-289 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
GPFJAPFD_00851 2.1e-218 luxE 6.2.1.19 H long-chain-fatty-acid--luciferin-component ligase, acyl-protein synthase
GPFJAPFD_00852 4.2e-251 F Psort location CytoplasmicMembrane, score 10.00
GPFJAPFD_00853 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
GPFJAPFD_00854 2.6e-307 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
GPFJAPFD_00855 2e-74
GPFJAPFD_00856 7.6e-249 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
GPFJAPFD_00857 1.9e-158 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
GPFJAPFD_00858 1.8e-198 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
GPFJAPFD_00859 4.5e-100 sixA 3.6.1.55 T Phosphoglycerate mutase family
GPFJAPFD_00860 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GPFJAPFD_00861 1.6e-157 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
GPFJAPFD_00862 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
GPFJAPFD_00863 3e-187 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
GPFJAPFD_00864 4.2e-74 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
GPFJAPFD_00865 5.2e-278 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
GPFJAPFD_00866 7e-178 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
GPFJAPFD_00867 9.3e-155 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
GPFJAPFD_00868 6.6e-179 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
GPFJAPFD_00869 5.5e-124 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GPFJAPFD_00870 2.9e-162 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
GPFJAPFD_00871 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
GPFJAPFD_00872 8.8e-109 J Acetyltransferase (GNAT) domain
GPFJAPFD_00873 6.1e-69 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
GPFJAPFD_00874 9.6e-219 yxjG_1 E Psort location Cytoplasmic, score 8.87
GPFJAPFD_00875 6.1e-122 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
GPFJAPFD_00876 1.8e-50 sdpR K helix_turn_helix, Arsenical Resistance Operon Repressor
GPFJAPFD_00877 2.3e-139 S SdpI/YhfL protein family
GPFJAPFD_00878 2.1e-109 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GPFJAPFD_00879 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GPFJAPFD_00880 5e-125 XK27_06785 V ABC transporter
GPFJAPFD_00883 4.3e-63
GPFJAPFD_00884 3.3e-96 M Peptidase family M23
GPFJAPFD_00885 0.0 fadD1 6.2.1.3 I AMP-binding enzyme
GPFJAPFD_00886 1.1e-268 G ABC transporter substrate-binding protein
GPFJAPFD_00887 5.3e-231 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
GPFJAPFD_00888 1.1e-209 guaB 1.1.1.205 F IMP dehydrogenase family protein
GPFJAPFD_00889 6.1e-108 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
GPFJAPFD_00890 1.7e-62 U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
GPFJAPFD_00891 2.6e-242 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GPFJAPFD_00892 3.6e-67 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
GPFJAPFD_00893 2.5e-143 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
GPFJAPFD_00894 1.3e-117
GPFJAPFD_00896 4.5e-233 XK27_00240 K Fic/DOC family
GPFJAPFD_00897 2.7e-70 pdxH S Pfam:Pyridox_oxidase
GPFJAPFD_00898 2.7e-302 M domain protein
GPFJAPFD_00899 5.6e-83 3.4.22.70 M Sortase family
GPFJAPFD_00900 5.2e-65 3.4.22.70 M Sortase family
GPFJAPFD_00901 1.5e-163 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
GPFJAPFD_00902 5.7e-172 corA P CorA-like Mg2+ transporter protein
GPFJAPFD_00903 1.5e-142 ET Bacterial periplasmic substrate-binding proteins
GPFJAPFD_00904 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
GPFJAPFD_00905 1.3e-92 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
GPFJAPFD_00906 0.0 comE S Competence protein
GPFJAPFD_00907 6.5e-179 holA 2.7.7.7 L DNA polymerase III delta subunit
GPFJAPFD_00908 9.2e-94 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
GPFJAPFD_00909 6.4e-148 yeaZ 2.3.1.234 O Glycoprotease family
GPFJAPFD_00910 7.6e-103 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
GPFJAPFD_00911 3.1e-195 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GPFJAPFD_00913 4.6e-119 yoaP E YoaP-like
GPFJAPFD_00914 4.5e-185 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GPFJAPFD_00915 5.3e-119 ykoE S ABC-type cobalt transport system, permease component
GPFJAPFD_00916 6.7e-72 K MerR family regulatory protein
GPFJAPFD_00917 3e-198 adhB 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
GPFJAPFD_00918 1.5e-143 4.1.1.44 S Carboxymuconolactone decarboxylase family
GPFJAPFD_00919 6e-221 yxjG_1 E Psort location Cytoplasmic, score 8.87
GPFJAPFD_00920 1.8e-40 S Psort location CytoplasmicMembrane, score
GPFJAPFD_00921 1e-182 cat P Cation efflux family
GPFJAPFD_00924 1e-98
GPFJAPFD_00925 2.9e-130
GPFJAPFD_00926 5.7e-146 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
GPFJAPFD_00927 1e-278 pepC 3.4.22.40 E Peptidase C1-like family
GPFJAPFD_00928 2.8e-182 S IMP dehydrogenase activity
GPFJAPFD_00929 3.1e-23 ybiT S ABC transporter
GPFJAPFD_00930 1.3e-298 ybiT S ABC transporter
GPFJAPFD_00931 4.7e-111 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
GPFJAPFD_00932 6.3e-66 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
GPFJAPFD_00934 2e-13
GPFJAPFD_00935 2.4e-273 S Psort location Cytoplasmic, score 8.87
GPFJAPFD_00936 1.4e-139 S Domain of unknown function (DUF4194)
GPFJAPFD_00937 0.0 S Psort location Cytoplasmic, score 8.87
GPFJAPFD_00938 9.3e-220 S Psort location Cytoplasmic, score 8.87
GPFJAPFD_00939 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
GPFJAPFD_00940 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
GPFJAPFD_00941 6e-182 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
GPFJAPFD_00942 1.1e-170 rapZ S Displays ATPase and GTPase activities
GPFJAPFD_00943 2.8e-171 whiA K May be required for sporulation
GPFJAPFD_00944 1.9e-220 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
GPFJAPFD_00945 2.8e-148 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GPFJAPFD_00946 2.4e-32 secG U Preprotein translocase SecG subunit
GPFJAPFD_00947 3.3e-163 S Sucrose-6F-phosphate phosphohydrolase
GPFJAPFD_00948 8e-301 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
GPFJAPFD_00949 7.1e-09 pnuC H Nicotinamide mononucleotide transporter
GPFJAPFD_00950 1.2e-29 pnuC H Nicotinamide mononucleotide transporter
GPFJAPFD_00951 2.5e-68 pnuC H Nicotinamide mononucleotide transporter
GPFJAPFD_00952 2.2e-41 nadR H ATPase kinase involved in NAD metabolism
GPFJAPFD_00953 4.2e-203 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
GPFJAPFD_00954 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
GPFJAPFD_00955 1.1e-195 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
GPFJAPFD_00956 3.8e-186 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
GPFJAPFD_00957 5.1e-158 G Fructosamine kinase
GPFJAPFD_00958 6.9e-156 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
GPFJAPFD_00959 1.6e-156 S PAC2 family
GPFJAPFD_00966 3.2e-08
GPFJAPFD_00967 5.4e-36
GPFJAPFD_00968 4.7e-76 garA T Inner membrane component of T3SS, cytoplasmic domain
GPFJAPFD_00969 9.7e-112 K helix_turn_helix, mercury resistance
GPFJAPFD_00970 4.6e-61
GPFJAPFD_00971 2e-140 pgp 3.1.3.18 S HAD-hyrolase-like
GPFJAPFD_00972 3.9e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
GPFJAPFD_00973 0.0 helY L DEAD DEAH box helicase
GPFJAPFD_00974 2.1e-54
GPFJAPFD_00975 0.0 pafB K WYL domain
GPFJAPFD_00976 1.4e-264 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
GPFJAPFD_00978 1.1e-69
GPFJAPFD_00979 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
GPFJAPFD_00980 9.1e-144 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GPFJAPFD_00981 3.8e-160 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GPFJAPFD_00982 1.2e-32
GPFJAPFD_00983 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
GPFJAPFD_00984 1.8e-246
GPFJAPFD_00985 2.6e-161 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
GPFJAPFD_00986 2.2e-221 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
GPFJAPFD_00987 1.8e-99 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GPFJAPFD_00988 4.4e-57 yajC U Preprotein translocase subunit
GPFJAPFD_00989 5.6e-200 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
GPFJAPFD_00990 1e-105 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
GPFJAPFD_00991 1e-99 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
GPFJAPFD_00992 5.2e-128 yebC K transcriptional regulatory protein
GPFJAPFD_00993 4.6e-112 pgsA1 2.7.8.11, 2.7.8.5 I CDP-alcohol phosphatidyltransferase
GPFJAPFD_00994 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GPFJAPFD_00995 1.7e-140 S Bacterial protein of unknown function (DUF881)
GPFJAPFD_00996 4.2e-45 sbp S Protein of unknown function (DUF1290)
GPFJAPFD_00997 1.7e-171 S Bacterial protein of unknown function (DUF881)
GPFJAPFD_00998 1e-102 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GPFJAPFD_00999 3.9e-156 hisG 2.4.2.17 F ATP phosphoribosyltransferase
GPFJAPFD_01000 1.9e-40 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
GPFJAPFD_01001 4.2e-97 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
GPFJAPFD_01002 4.6e-180 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GPFJAPFD_01003 2.6e-163 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
GPFJAPFD_01004 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
GPFJAPFD_01005 7.1e-297 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
GPFJAPFD_01006 2.9e-72 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
GPFJAPFD_01007 3e-139 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
GPFJAPFD_01008 3.2e-225 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
GPFJAPFD_01009 6.1e-177 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
GPFJAPFD_01010 7.6e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
GPFJAPFD_01011 2.6e-135 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
GPFJAPFD_01013 5e-143 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GPFJAPFD_01014 1.9e-139 rpsB J Belongs to the universal ribosomal protein uS2 family
GPFJAPFD_01015 1.1e-83 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GPFJAPFD_01016 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
GPFJAPFD_01017 1.8e-121
GPFJAPFD_01019 5e-190 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GPFJAPFD_01020 9.1e-141 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GPFJAPFD_01021 3.2e-101
GPFJAPFD_01022 2.9e-243 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
GPFJAPFD_01023 4.2e-250 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
GPFJAPFD_01024 2.3e-284 thrC 4.2.3.1 E Threonine synthase N terminus
GPFJAPFD_01025 4.6e-233 EGP Major facilitator Superfamily
GPFJAPFD_01026 2.3e-107 3.1.3.27 E haloacid dehalogenase-like hydrolase
GPFJAPFD_01027 7.4e-174 G Fic/DOC family
GPFJAPFD_01028 6.5e-144
GPFJAPFD_01029 6.9e-164 IQ Enoyl-(Acyl carrier protein) reductase
GPFJAPFD_01030 7.2e-164 S Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GPFJAPFD_01031 7.4e-77 3.4.13.22 S Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GPFJAPFD_01032 2.2e-96 bcp 1.11.1.15 O Redoxin
GPFJAPFD_01033 1.7e-21 S Psort location Cytoplasmic, score 8.87
GPFJAPFD_01034 1.1e-95 S Pyridoxamine 5'-phosphate oxidase
GPFJAPFD_01035 0.0 S Histidine phosphatase superfamily (branch 2)
GPFJAPFD_01036 1.3e-43 L transposition
GPFJAPFD_01037 1.1e-23 C Acetamidase/Formamidase family
GPFJAPFD_01038 1.7e-58 K helix_turn_helix gluconate operon transcriptional repressor
GPFJAPFD_01039 2.3e-173 V ATPases associated with a variety of cellular activities
GPFJAPFD_01040 4.4e-116 S ABC-2 family transporter protein
GPFJAPFD_01041 2.4e-121 S Haloacid dehalogenase-like hydrolase
GPFJAPFD_01042 3e-256 recN L May be involved in recombinational repair of damaged DNA
GPFJAPFD_01043 3.4e-177 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GPFJAPFD_01044 2e-264 trkB P Cation transport protein
GPFJAPFD_01045 2.3e-116 trkA P TrkA-N domain
GPFJAPFD_01046 1.1e-133 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
GPFJAPFD_01047 2.2e-190 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
GPFJAPFD_01048 4.3e-149 L Tetratricopeptide repeat
GPFJAPFD_01049 4.2e-250 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GPFJAPFD_01050 0.0 S Protein of unknown function (DUF975)
GPFJAPFD_01051 8.6e-137 S Putative ABC-transporter type IV
GPFJAPFD_01052 1.2e-31 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
GPFJAPFD_01053 1.3e-279 argH 4.3.2.1 E argininosuccinate lyase
GPFJAPFD_01054 4.6e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
GPFJAPFD_01055 2.3e-82 argR K Regulates arginine biosynthesis genes
GPFJAPFD_01056 2.3e-184 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GPFJAPFD_01057 2.7e-241 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
GPFJAPFD_01058 2.8e-179 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
GPFJAPFD_01059 2.2e-210 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
GPFJAPFD_01060 4.1e-206 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
GPFJAPFD_01061 4.9e-99
GPFJAPFD_01062 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
GPFJAPFD_01063 2.4e-203 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GPFJAPFD_01064 9.6e-158 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GPFJAPFD_01065 1.2e-97 yvdD 3.2.2.10 S Possible lysine decarboxylase
GPFJAPFD_01067 4.5e-18
GPFJAPFD_01069 1.5e-17 L HNH endonuclease
GPFJAPFD_01070 8.3e-113 ung2 3.2.2.27 L Uracil DNA glycosylase superfamily
GPFJAPFD_01072 3.4e-42 V DNA modification
GPFJAPFD_01073 7.8e-282 glnA 6.3.1.2 E glutamine synthetase
GPFJAPFD_01074 6e-143 S Domain of unknown function (DUF4191)
GPFJAPFD_01075 8.4e-247 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GPFJAPFD_01076 3.6e-93 S Protein of unknown function (DUF3043)
GPFJAPFD_01077 4.2e-253 argE E Peptidase dimerisation domain
GPFJAPFD_01078 3.1e-145 cbiQ P Cobalt transport protein
GPFJAPFD_01079 3.1e-265 ykoD P ATPases associated with a variety of cellular activities
GPFJAPFD_01080 2.2e-84 ykoE S ABC-type cobalt transport system, permease component
GPFJAPFD_01081 4.8e-202 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
GPFJAPFD_01082 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GPFJAPFD_01083 0.0 S Tetratricopeptide repeat
GPFJAPFD_01084 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
GPFJAPFD_01085 8.1e-307 2.8.2.22 S Arylsulfotransferase Ig-like domain
GPFJAPFD_01086 5e-145 bioM P ATPases associated with a variety of cellular activities
GPFJAPFD_01087 8.1e-221 E Aminotransferase class I and II
GPFJAPFD_01088 1.6e-140 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
GPFJAPFD_01089 4.8e-201 S Glycosyltransferase, group 2 family protein
GPFJAPFD_01090 1.8e-144 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
GPFJAPFD_01091 2.4e-47 yhbY J CRS1_YhbY
GPFJAPFD_01092 0.0 ecfA GP ABC transporter, ATP-binding protein
GPFJAPFD_01093 2.3e-108 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GPFJAPFD_01094 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
GPFJAPFD_01095 2.8e-113 kcsA U Ion channel
GPFJAPFD_01096 9.1e-189 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
GPFJAPFD_01097 1.7e-84 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GPFJAPFD_01098 4.4e-123 3.2.1.8 S alpha beta
GPFJAPFD_01099 3.3e-18
GPFJAPFD_01100 5.9e-188 mcrB L Restriction endonuclease
GPFJAPFD_01101 3e-274 L Uncharacterized conserved protein (DUF2075)
GPFJAPFD_01102 1.4e-143
GPFJAPFD_01103 0.0
GPFJAPFD_01104 5.4e-189
GPFJAPFD_01105 0.0 L DEAD-like helicases superfamily
GPFJAPFD_01106 4.2e-97 XK26_04895
GPFJAPFD_01108 9.3e-76 V Abi-like protein
GPFJAPFD_01109 7.3e-69
GPFJAPFD_01110 9.6e-211
GPFJAPFD_01111 7.8e-148 S phosphoesterase or phosphohydrolase
GPFJAPFD_01112 7e-41 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
GPFJAPFD_01113 1.4e-71 4.1.1.44 S Cupin domain
GPFJAPFD_01114 2.3e-166 C Aldo/keto reductase family
GPFJAPFD_01115 2.9e-128 E Psort location Cytoplasmic, score 8.87
GPFJAPFD_01116 6.1e-129 yebE S DUF218 domain
GPFJAPFD_01117 1.2e-231 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
GPFJAPFD_01118 9e-237 rnd 3.1.13.5 J 3'-5' exonuclease
GPFJAPFD_01119 2.2e-79 S Protein of unknown function (DUF3000)
GPFJAPFD_01120 7.4e-166 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GPFJAPFD_01121 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
GPFJAPFD_01122 4.5e-31
GPFJAPFD_01123 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GPFJAPFD_01124 1.2e-211 S Peptidase dimerisation domain
GPFJAPFD_01125 1.3e-93 metI P Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01126 2.5e-174 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GPFJAPFD_01127 2.1e-150 metQ P NLPA lipoprotein
GPFJAPFD_01129 5.1e-113 S Sucrose-6F-phosphate phosphohydrolase
GPFJAPFD_01130 0.0 S LPXTG-motif cell wall anchor domain protein
GPFJAPFD_01131 4.1e-243 dinF V MatE
GPFJAPFD_01132 2.7e-102 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GPFJAPFD_01133 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GPFJAPFD_01134 1.3e-84 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
GPFJAPFD_01135 1e-47 S Domain of unknown function (DUF4193)
GPFJAPFD_01136 4.1e-147 S Protein of unknown function (DUF3071)
GPFJAPFD_01137 3e-234 S Type I phosphodiesterase / nucleotide pyrophosphatase
GPFJAPFD_01138 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
GPFJAPFD_01139 0.0 lhr L DEAD DEAH box helicase
GPFJAPFD_01140 5.8e-32 yozG K Cro/C1-type HTH DNA-binding domain
GPFJAPFD_01141 2.4e-79 S Protein of unknown function (DUF2975)
GPFJAPFD_01142 2.5e-242 T PhoQ Sensor
GPFJAPFD_01143 2.6e-222 G Major Facilitator Superfamily
GPFJAPFD_01144 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
GPFJAPFD_01145 3.4e-173 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
GPFJAPFD_01146 1.1e-118
GPFJAPFD_01147 1e-196 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
GPFJAPFD_01148 0.0 pknL 2.7.11.1 KLT PASTA
GPFJAPFD_01149 4.3e-132 plsC2 2.3.1.51 I Phosphate acyltransferases
GPFJAPFD_01150 2.9e-97
GPFJAPFD_01151 3.4e-194 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
GPFJAPFD_01152 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GPFJAPFD_01153 3.3e-118 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GPFJAPFD_01154 1.1e-119 recX S Modulates RecA activity
GPFJAPFD_01155 2.3e-207 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GPFJAPFD_01156 8.2e-45 S Protein of unknown function (DUF3046)
GPFJAPFD_01157 3.6e-80 K Helix-turn-helix XRE-family like proteins
GPFJAPFD_01158 1e-96 cinA 3.5.1.42 S Belongs to the CinA family
GPFJAPFD_01159 8.6e-122 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GPFJAPFD_01160 0.0 ftsK D FtsK SpoIIIE family protein
GPFJAPFD_01161 9.3e-192 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GPFJAPFD_01162 8.2e-279 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
GPFJAPFD_01163 2.3e-133 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
GPFJAPFD_01164 1.4e-173 ydeD EG EamA-like transporter family
GPFJAPFD_01165 1.1e-126 ybhL S Belongs to the BI1 family
GPFJAPFD_01166 9.6e-59 S Domain of unknown function (DUF5067)
GPFJAPFD_01167 2.2e-241 T Histidine kinase
GPFJAPFD_01168 4.1e-127 K helix_turn_helix, Lux Regulon
GPFJAPFD_01169 0.0 S Protein of unknown function DUF262
GPFJAPFD_01170 9e-116 K helix_turn_helix, Lux Regulon
GPFJAPFD_01171 7.9e-244 T Histidine kinase
GPFJAPFD_01172 4.4e-191 V ATPases associated with a variety of cellular activities
GPFJAPFD_01173 2.1e-222 V ABC-2 family transporter protein
GPFJAPFD_01174 2.9e-227 V ABC-2 family transporter protein
GPFJAPFD_01175 3.5e-210 rhaR1 K helix_turn_helix, arabinose operon control protein
GPFJAPFD_01176 5.2e-108 maa 2.3.1.18, 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
GPFJAPFD_01177 8.1e-244 VP1224 V Psort location CytoplasmicMembrane, score 9.99
GPFJAPFD_01178 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
GPFJAPFD_01179 0.0 ctpE P E1-E2 ATPase
GPFJAPFD_01180 2e-74
GPFJAPFD_01181 6.9e-242 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GPFJAPFD_01182 1e-131 S Protein of unknown function (DUF3159)
GPFJAPFD_01183 1.1e-150 S Protein of unknown function (DUF3710)
GPFJAPFD_01184 1.4e-172 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
GPFJAPFD_01185 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
GPFJAPFD_01186 4.1e-170 dppC EP N-terminal TM domain of oligopeptide transport permease C
GPFJAPFD_01187 1.6e-155 dppB EP Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01188 0.0 E ABC transporter, substrate-binding protein, family 5
GPFJAPFD_01189 0.0 E ABC transporter, substrate-binding protein, family 5
GPFJAPFD_01190 1.6e-171 xerC D Belongs to the 'phage' integrase family. XerC subfamily
GPFJAPFD_01191 5.2e-08
GPFJAPFD_01192 2.8e-34
GPFJAPFD_01193 2e-194 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
GPFJAPFD_01194 3.7e-190 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
GPFJAPFD_01195 4e-104
GPFJAPFD_01196 0.0 typA T Elongation factor G C-terminus
GPFJAPFD_01197 1.7e-249 naiP U Sugar (and other) transporter
GPFJAPFD_01198 2.1e-151 nrtR 3.6.1.55 F NUDIX hydrolase
GPFJAPFD_01199 6.8e-153 soj D CobQ CobB MinD ParA nucleotide binding domain protein
GPFJAPFD_01200 2e-177 xerD D recombinase XerD
GPFJAPFD_01201 9.6e-62 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GPFJAPFD_01202 2.1e-25 rpmI J Ribosomal protein L35
GPFJAPFD_01203 1.6e-103 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GPFJAPFD_01204 4.9e-110 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
GPFJAPFD_01205 1.8e-198 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
GPFJAPFD_01206 2.1e-88 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GPFJAPFD_01207 7.9e-172 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
GPFJAPFD_01208 4.3e-188 galM 5.1.3.3 G Aldose 1-epimerase
GPFJAPFD_01209 1.2e-36
GPFJAPFD_01210 1.7e-97 sigH K Belongs to the sigma-70 factor family. ECF subfamily
GPFJAPFD_01211 1.9e-281 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GPFJAPFD_01212 5e-187 V Acetyltransferase (GNAT) domain
GPFJAPFD_01213 1.9e-289 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
GPFJAPFD_01214 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
GPFJAPFD_01215 6.2e-96 3.6.1.55 F NUDIX domain
GPFJAPFD_01216 0.0 P Belongs to the ABC transporter superfamily
GPFJAPFD_01217 1.8e-191 dppC EP Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01218 3.2e-187 dppB EP Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01219 1.4e-306 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
GPFJAPFD_01220 1.7e-218 GK ROK family
GPFJAPFD_01221 1.1e-164 2.7.1.4 G pfkB family carbohydrate kinase
GPFJAPFD_01222 4.6e-220 S Metal-independent alpha-mannosidase (GH125)
GPFJAPFD_01223 1.6e-27
GPFJAPFD_01224 1.6e-246 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
GPFJAPFD_01225 1.7e-140 ftsQ 6.3.2.4 D Cell division protein FtsQ
GPFJAPFD_01226 2.3e-271 murC 6.3.2.8 M Belongs to the MurCDEF family
GPFJAPFD_01227 6.3e-216 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GPFJAPFD_01228 8.1e-203 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
GPFJAPFD_01229 2.7e-258 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GPFJAPFD_01230 5.2e-201 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GPFJAPFD_01231 2.6e-256 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
GPFJAPFD_01232 2.1e-144 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GPFJAPFD_01233 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
GPFJAPFD_01234 1.5e-61 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
GPFJAPFD_01235 1.5e-189 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
GPFJAPFD_01236 7e-92 mraZ K Belongs to the MraZ family
GPFJAPFD_01237 0.0 L DNA helicase
GPFJAPFD_01238 5.6e-217 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
GPFJAPFD_01239 2.9e-84 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GPFJAPFD_01240 1e-53 M Lysin motif
GPFJAPFD_01241 2.2e-131 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GPFJAPFD_01242 1.3e-149 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GPFJAPFD_01243 2.3e-176 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
GPFJAPFD_01244 4.9e-271 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GPFJAPFD_01245 5.9e-114 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
GPFJAPFD_01246 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
GPFJAPFD_01247 4.4e-112
GPFJAPFD_01248 1.9e-59
GPFJAPFD_01249 1.4e-187 V N-Acetylmuramoyl-L-alanine amidase
GPFJAPFD_01250 1.5e-89
GPFJAPFD_01251 4.2e-118 ytrE V ATPases associated with a variety of cellular activities
GPFJAPFD_01252 5.5e-220 EGP Major facilitator Superfamily
GPFJAPFD_01253 3.6e-139 M Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
GPFJAPFD_01254 4e-209 S Domain of unknown function (DUF5067)
GPFJAPFD_01255 3.1e-264 glnA2 6.3.1.2 E glutamine synthetase
GPFJAPFD_01256 7e-130 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
GPFJAPFD_01257 4.1e-121 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
GPFJAPFD_01258 1.5e-122
GPFJAPFD_01259 1.5e-109 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
GPFJAPFD_01260 2.5e-225 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
GPFJAPFD_01261 2.4e-259 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
GPFJAPFD_01262 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
GPFJAPFD_01263 4.9e-176 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
GPFJAPFD_01264 4.3e-87 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GPFJAPFD_01265 4.5e-31 3.1.21.3 V DivIVA protein
GPFJAPFD_01266 6.9e-41 yggT S YGGT family
GPFJAPFD_01267 8.9e-81 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
GPFJAPFD_01268 5.6e-220 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GPFJAPFD_01269 1.9e-244 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GPFJAPFD_01270 1.3e-295 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
GPFJAPFD_01271 1e-105 S Pilus assembly protein, PilO
GPFJAPFD_01272 8.1e-166 pilN NU PFAM Fimbrial assembly family protein
GPFJAPFD_01273 3e-190 pilM NU Type IV pilus assembly protein PilM;
GPFJAPFD_01274 2.4e-150 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
GPFJAPFD_01275 0.0
GPFJAPFD_01276 1.2e-230 pilC U Type II secretion system (T2SS), protein F
GPFJAPFD_01277 1.8e-40 pilA NU Prokaryotic N-terminal methylation motif
GPFJAPFD_01278 1.6e-104 S Prokaryotic N-terminal methylation motif
GPFJAPFD_01279 4.9e-137 ppdC NU Prokaryotic N-terminal methylation motif
GPFJAPFD_01280 0.0 pulE NU Type II/IV secretion system protein
GPFJAPFD_01281 0.0 pilT NU Type II/IV secretion system protein
GPFJAPFD_01282 0.0
GPFJAPFD_01283 7.1e-153 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
GPFJAPFD_01284 1.1e-133 thiE 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
GPFJAPFD_01285 5.4e-150 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
GPFJAPFD_01286 3e-60 S Thiamine-binding protein
GPFJAPFD_01287 3.7e-193 K helix_turn _helix lactose operon repressor
GPFJAPFD_01288 2.8e-241 lacY P LacY proton/sugar symporter
GPFJAPFD_01289 0.0 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
GPFJAPFD_01290 1.4e-142 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01291 5.3e-206 P NMT1/THI5 like
GPFJAPFD_01292 2.8e-214 iunH1 3.2.2.1 F nucleoside hydrolase
GPFJAPFD_01293 4e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GPFJAPFD_01294 7.3e-135 recO L Involved in DNA repair and RecF pathway recombination
GPFJAPFD_01295 0.0 I acetylesterase activity
GPFJAPFD_01296 5.6e-225 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
GPFJAPFD_01297 8.5e-218 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
GPFJAPFD_01298 4.1e-236 2.7.11.1 NU Tfp pilus assembly protein FimV
GPFJAPFD_01300 6.5e-75 S Protein of unknown function (DUF3052)
GPFJAPFD_01301 1.3e-154 lon T Belongs to the peptidase S16 family
GPFJAPFD_01302 8.3e-285 S Zincin-like metallopeptidase
GPFJAPFD_01303 1.8e-281 uvrD2 3.6.4.12 L DNA helicase
GPFJAPFD_01304 1.1e-270 mphA S Aminoglycoside phosphotransferase
GPFJAPFD_01305 3.6e-32 S Protein of unknown function (DUF3107)
GPFJAPFD_01306 1.1e-172 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
GPFJAPFD_01307 2.8e-117 S Vitamin K epoxide reductase
GPFJAPFD_01308 7.8e-171 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
GPFJAPFD_01309 2.2e-145 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
GPFJAPFD_01310 3.5e-21 S Patatin-like phospholipase
GPFJAPFD_01311 4.6e-311 E ABC transporter, substrate-binding protein, family 5
GPFJAPFD_01312 6.4e-176 iaaA 3.4.19.5, 3.5.1.1 E Asparaginase
GPFJAPFD_01313 1e-156 S Patatin-like phospholipase
GPFJAPFD_01314 5.1e-187 K LysR substrate binding domain protein
GPFJAPFD_01315 1.3e-240 patB 4.4.1.8 E Aminotransferase, class I II
GPFJAPFD_01316 2.5e-121 S Phospholipase/Carboxylesterase
GPFJAPFD_01318 7.3e-33
GPFJAPFD_01319 1e-130 L PFAM Integrase catalytic
GPFJAPFD_01320 7.6e-26 L transposase activity
GPFJAPFD_01321 9.9e-42 L transposase activity
GPFJAPFD_01322 3.4e-115 S CRISPR-associated protein (Cas_Csn2)
GPFJAPFD_01323 6e-18 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
GPFJAPFD_01324 3.7e-165 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
GPFJAPFD_01325 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
GPFJAPFD_01326 7.3e-63 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
GPFJAPFD_01327 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GPFJAPFD_01328 1.8e-257 lacS G Psort location CytoplasmicMembrane, score 10.00
GPFJAPFD_01329 2.6e-183 lacR K Transcriptional regulator, LacI family
GPFJAPFD_01330 0.0 V ABC transporter transmembrane region
GPFJAPFD_01331 0.0 V ABC transporter, ATP-binding protein
GPFJAPFD_01332 4.7e-102 K MarR family
GPFJAPFD_01333 0.0 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
GPFJAPFD_01334 1.1e-104 K Bacterial regulatory proteins, tetR family
GPFJAPFD_01335 6.9e-199 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
GPFJAPFD_01336 3.8e-182 G Transporter major facilitator family protein
GPFJAPFD_01337 0.0 3.2.1.40 E Bacterial alpha-L-rhamnosidase C-terminal domain
GPFJAPFD_01338 6.3e-214 EGP Major facilitator Superfamily
GPFJAPFD_01339 1.2e-117 K Periplasmic binding protein domain
GPFJAPFD_01340 4.3e-14 K helix_turn_helix, mercury resistance
GPFJAPFD_01341 4e-220 lmrB U Major Facilitator Superfamily
GPFJAPFD_01342 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
GPFJAPFD_01343 5.4e-110 K Bacterial regulatory proteins, tetR family
GPFJAPFD_01344 1.1e-239 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
GPFJAPFD_01345 0.0 3.2.1.37 GH43 G Glycosyl hydrolases family 43
GPFJAPFD_01346 2.3e-234 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
GPFJAPFD_01347 1.2e-236 G Transporter major facilitator family protein
GPFJAPFD_01348 2.4e-110 K Bacterial regulatory proteins, tetR family
GPFJAPFD_01349 0.0 lacZ3 3.2.1.23 G Beta-galactosidase trimerisation domain
GPFJAPFD_01350 4.2e-115 K Bacterial regulatory proteins, tetR family
GPFJAPFD_01351 1.6e-254 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
GPFJAPFD_01352 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
GPFJAPFD_01353 3.9e-156 hgdC I BadF/BadG/BcrA/BcrD ATPase family
GPFJAPFD_01354 1.6e-139 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GPFJAPFD_01355 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
GPFJAPFD_01356 8.9e-245 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GPFJAPFD_01357 7e-41 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GPFJAPFD_01359 1.2e-197 S Endonuclease/Exonuclease/phosphatase family
GPFJAPFD_01360 4.6e-43 V ATPases associated with a variety of cellular activities
GPFJAPFD_01361 4.9e-23
GPFJAPFD_01362 2.2e-99 tmp1 S Domain of unknown function (DUF4391)
GPFJAPFD_01363 3e-168 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
GPFJAPFD_01364 6.2e-232 aspB E Aminotransferase class-V
GPFJAPFD_01365 1.9e-70 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
GPFJAPFD_01366 2.1e-188 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
GPFJAPFD_01367 0.0 helD 3.6.4.12 L Psort location Cytoplasmic, score 8.87
GPFJAPFD_01369 4.3e-32 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
GPFJAPFD_01370 1.2e-26 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
GPFJAPFD_01371 1e-59 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
GPFJAPFD_01372 2.5e-13 KL Domain of unknown function (DUF3427)
GPFJAPFD_01373 0.0 KL Domain of unknown function (DUF3427)
GPFJAPFD_01374 1.5e-76
GPFJAPFD_01375 1.4e-69 S Bacterial PH domain
GPFJAPFD_01376 2.5e-247 S zinc finger
GPFJAPFD_01377 0.0 S Psort location CytoplasmicMembrane, score 9.99
GPFJAPFD_01378 2e-239 V ABC transporter permease
GPFJAPFD_01379 5.5e-156 V ABC transporter
GPFJAPFD_01380 5.1e-150 T HD domain
GPFJAPFD_01381 1e-167 S Glutamine amidotransferase domain
GPFJAPFD_01382 0.0 kup P Transport of potassium into the cell
GPFJAPFD_01383 2.2e-184 tatD L TatD related DNase
GPFJAPFD_01384 0.0 G Alpha-L-arabinofuranosidase C-terminus
GPFJAPFD_01385 8.1e-22 rafA 3.2.1.22 G alpha-galactosidase
GPFJAPFD_01386 3.5e-222 K helix_turn _helix lactose operon repressor
GPFJAPFD_01387 0.0 rafA 3.2.1.22 G Psort location Cytoplasmic, score 8.87
GPFJAPFD_01388 3e-125
GPFJAPFD_01389 0.0 yknV V ABC transporter
GPFJAPFD_01390 0.0 mdlA2 V ABC transporter
GPFJAPFD_01391 1.1e-214 lipA I Hydrolase, alpha beta domain protein
GPFJAPFD_01392 5e-27 S Psort location Cytoplasmic, score 8.87
GPFJAPFD_01393 3.8e-156 I alpha/beta hydrolase fold
GPFJAPFD_01394 7.2e-233 M Protein of unknown function (DUF2961)
GPFJAPFD_01395 3.2e-153 P Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01396 3.2e-159 G Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01397 5.1e-256 G Bacterial extracellular solute-binding protein
GPFJAPFD_01398 2.2e-190 K helix_turn _helix lactose operon repressor
GPFJAPFD_01399 0.0 M probably involved in cell wall
GPFJAPFD_01400 2.9e-251 3.2.1.14 GH18 S Carbohydrate binding domain
GPFJAPFD_01401 0.0 T Diguanylate cyclase, GGDEF domain
GPFJAPFD_01402 1.1e-186 lacR K Transcriptional regulator, LacI family
GPFJAPFD_01403 1.9e-221 nagA 3.5.1.25 G Amidohydrolase family
GPFJAPFD_01404 7.6e-149 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GPFJAPFD_01405 0.0 G Glycosyl hydrolase family 20, domain 2
GPFJAPFD_01406 3.9e-173 2.7.1.2 GK ROK family
GPFJAPFD_01407 4.4e-164 G ABC transporter permease
GPFJAPFD_01408 7.5e-147 G Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01409 4.2e-242 G Bacterial extracellular solute-binding protein
GPFJAPFD_01410 1.4e-209 GK ROK family
GPFJAPFD_01411 1.1e-262 lacS G Psort location CytoplasmicMembrane, score 10.00
GPFJAPFD_01412 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GPFJAPFD_01413 4.1e-135 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4-amino-5-aminomethyl-2-methylpyrimidine to 4-amino- 5-hydroxymethyl-2-methylpyrimidine (HMP)
GPFJAPFD_01415 0.0 cbgA_1 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
GPFJAPFD_01416 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GPFJAPFD_01417 6.6e-107
GPFJAPFD_01418 1.9e-73
GPFJAPFD_01419 6.1e-191 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GPFJAPFD_01420 1.6e-17 3.2.1.78 GH26 G Glycosyl hydrolase family 26
GPFJAPFD_01421 5.8e-126 dedA S SNARE associated Golgi protein
GPFJAPFD_01423 8.7e-130 S HAD hydrolase, family IA, variant 3
GPFJAPFD_01424 3.3e-46
GPFJAPFD_01425 4.5e-115 hspR K transcriptional regulator, MerR family
GPFJAPFD_01426 3.9e-158 dnaJ1 O DnaJ molecular chaperone homology domain
GPFJAPFD_01427 2.8e-48 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GPFJAPFD_01428 0.0 dnaK O Heat shock 70 kDa protein
GPFJAPFD_01429 1.2e-143 S Mitochondrial biogenesis AIM24
GPFJAPFD_01430 5.4e-59 phoA 3.1.3.1, 3.1.3.39 P Alkaline phosphatase homologues
GPFJAPFD_01431 3.1e-130 S membrane transporter protein
GPFJAPFD_01432 2e-191 K Psort location Cytoplasmic, score
GPFJAPFD_01433 3.9e-128 traX S TraX protein
GPFJAPFD_01434 7e-144 S HAD-hyrolase-like
GPFJAPFD_01435 0.0 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
GPFJAPFD_01436 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
GPFJAPFD_01437 1.3e-105 S Protein of unknown function, DUF624
GPFJAPFD_01438 5.2e-153 rafG G ABC transporter permease
GPFJAPFD_01439 3.7e-154 msmF G Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01440 1.7e-182 K Psort location Cytoplasmic, score
GPFJAPFD_01441 5e-185 K Periplasmic binding protein-like domain
GPFJAPFD_01442 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
GPFJAPFD_01443 6e-249 amyE G Bacterial extracellular solute-binding protein
GPFJAPFD_01444 2.9e-136 G Phosphoglycerate mutase family
GPFJAPFD_01445 1.9e-62 S Protein of unknown function (DUF4235)
GPFJAPFD_01446 3.9e-142 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
GPFJAPFD_01447 1.6e-44
GPFJAPFD_01448 1.8e-83 K Cro/C1-type HTH DNA-binding domain
GPFJAPFD_01449 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
GPFJAPFD_01450 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GPFJAPFD_01451 2.3e-114 S Short repeat of unknown function (DUF308)
GPFJAPFD_01452 1.1e-47 S Antitoxin component of a toxin-antitoxin (TA) module
GPFJAPFD_01453 2.9e-54 DJ Addiction module toxin, RelE StbE family
GPFJAPFD_01454 4.5e-13 S Psort location Extracellular, score 8.82
GPFJAPFD_01455 1.5e-231 EGP Major facilitator Superfamily
GPFJAPFD_01456 1.2e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GPFJAPFD_01457 2e-269 KLT Domain of unknown function (DUF4032)
GPFJAPFD_01458 1.6e-210 ugpC E Belongs to the ABC transporter superfamily
GPFJAPFD_01459 2.8e-131 K LytTr DNA-binding domain
GPFJAPFD_01460 2.7e-234 T GHKL domain
GPFJAPFD_01461 7.7e-72
GPFJAPFD_01462 3.3e-213 clcA_2 P Voltage gated chloride channel
GPFJAPFD_01463 9.7e-47 S Psort location Cytoplasmic, score
GPFJAPFD_01464 8.9e-25
GPFJAPFD_01465 3.4e-138
GPFJAPFD_01466 5.2e-160 3.4.22.70 M Sortase family
GPFJAPFD_01467 4.7e-235 M LPXTG-motif cell wall anchor domain protein
GPFJAPFD_01468 0.0 S LPXTG-motif cell wall anchor domain protein
GPFJAPFD_01469 1.6e-73 S GtrA-like protein
GPFJAPFD_01470 0.0 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
GPFJAPFD_01471 1.1e-119 ybjG 3.6.1.27 I Psort location CytoplasmicMembrane, score
GPFJAPFD_01472 8.9e-80 ypeA 2.3.1.1 K Psort location Cytoplasmic, score 8.87
GPFJAPFD_01473 1.1e-113 vex2 V ABC transporter, ATP-binding protein
GPFJAPFD_01474 4.5e-214 vex1 V Efflux ABC transporter, permease protein
GPFJAPFD_01475 2.9e-241 vex3 V ABC transporter permease
GPFJAPFD_01476 6.1e-25 G Major facilitator Superfamily
GPFJAPFD_01477 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GPFJAPFD_01478 2.7e-188 lacR K Transcriptional regulator, LacI family
GPFJAPFD_01479 0.0 3.2.1.51 GH95 G Glycosyl hydrolase family 65, N-terminal domain
GPFJAPFD_01480 4e-167 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
GPFJAPFD_01481 4.3e-160 S Amidohydrolase
GPFJAPFD_01482 2.2e-145 IQ KR domain
GPFJAPFD_01483 3.4e-244 4.2.1.68 M Enolase C-terminal domain-like
GPFJAPFD_01484 1.3e-265 G Bacterial extracellular solute-binding protein
GPFJAPFD_01485 1.1e-175 P Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01486 1.1e-156 P Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01487 2.7e-191 K Bacterial regulatory proteins, lacI family
GPFJAPFD_01488 2.3e-53 lacZ5 3.2.1.23 G beta-galactosidase activity
GPFJAPFD_01489 1.2e-263 G Bacterial extracellular solute-binding protein
GPFJAPFD_01490 7.4e-170 K helix_turn _helix lactose operon repressor
GPFJAPFD_01491 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
GPFJAPFD_01492 9.9e-169 G Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01493 5.8e-151 G ABC transporter permease
GPFJAPFD_01494 3.8e-12 S Psort location Extracellular, score 8.82
GPFJAPFD_01495 0.0 trxB1 1.8.1.9 C Thioredoxin domain
GPFJAPFD_01496 1.7e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
GPFJAPFD_01498 1.2e-48 I alpha/beta hydrolase fold
GPFJAPFD_01499 1.5e-71 I alpha/beta hydrolase fold
GPFJAPFD_01500 1.1e-30 I alpha/beta hydrolase fold
GPFJAPFD_01501 2.8e-145 cobB2 K Sir2 family
GPFJAPFD_01502 4.1e-234 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
GPFJAPFD_01503 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
GPFJAPFD_01504 2.6e-155 G Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01505 6.6e-157 G Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01506 1.5e-244 msmE7 G Bacterial extracellular solute-binding protein
GPFJAPFD_01507 8.4e-229 nagC GK ROK family
GPFJAPFD_01508 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
GPFJAPFD_01509 1.4e-77 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
GPFJAPFD_01510 0.0 yjcE P Sodium/hydrogen exchanger family
GPFJAPFD_01511 1.3e-153 ypfH S Phospholipase/Carboxylesterase
GPFJAPFD_01512 4e-112 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
GPFJAPFD_01513 1.3e-47 L PFAM Integrase catalytic
GPFJAPFD_01514 2.3e-37 yxeN P amino acid ABC transporter
GPFJAPFD_01515 4.3e-36 E Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01516 6.2e-73 3.6.3.21 E ABC transporter
GPFJAPFD_01517 3e-68 odh 1.5.1.28 I glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
GPFJAPFD_01518 2.3e-18 ET Bacterial periplasmic substrate-binding proteins
GPFJAPFD_01520 5.6e-238 bglA 3.2.1.21 G Glycosyl hydrolase family 1
GPFJAPFD_01521 8.7e-159 U Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01522 5.2e-162 U Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01523 5.6e-239 malE G Bacterial extracellular solute-binding protein
GPFJAPFD_01524 6.7e-204 rbsR K helix_turn _helix lactose operon repressor
GPFJAPFD_01525 0.0 3.2.1.21 GH3 G Fibronectin type III-like domain
GPFJAPFD_01526 0.0 KLT Protein tyrosine kinase
GPFJAPFD_01527 7.5e-151 O Thioredoxin
GPFJAPFD_01529 1.6e-197 S G5
GPFJAPFD_01530 2e-166 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
GPFJAPFD_01531 1.1e-167 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
GPFJAPFD_01532 2.6e-109 S LytR cell envelope-related transcriptional attenuator
GPFJAPFD_01533 1.7e-284 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
GPFJAPFD_01534 6.3e-122 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
GPFJAPFD_01535 0.0 M Conserved repeat domain
GPFJAPFD_01536 2.1e-305 murJ KLT MviN-like protein
GPFJAPFD_01537 0.0 murJ KLT MviN-like protein
GPFJAPFD_01538 4e-13 S Domain of unknown function (DUF4143)
GPFJAPFD_01539 1.4e-121 yorS 3.1.3.5 S 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
GPFJAPFD_01540 9.1e-14 S Psort location Extracellular, score 8.82
GPFJAPFD_01541 1.6e-180 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
GPFJAPFD_01542 6.8e-203 parB K Belongs to the ParB family
GPFJAPFD_01543 4.5e-172 parA D CobQ CobB MinD ParA nucleotide binding domain protein
GPFJAPFD_01544 1.2e-127 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
GPFJAPFD_01545 3.6e-91 jag S Putative single-stranded nucleic acids-binding domain
GPFJAPFD_01546 7.3e-189 yidC U Membrane protein insertase, YidC Oxa1 family
GPFJAPFD_01547 1.5e-43 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
GPFJAPFD_01548 5.9e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
GPFJAPFD_01549 2.8e-107
GPFJAPFD_01550 3.7e-66
GPFJAPFD_01551 4.9e-215 NT phage tail tape measure protein
GPFJAPFD_01553 3.2e-37
GPFJAPFD_01554 2.4e-60
GPFJAPFD_01555 7.9e-65
GPFJAPFD_01556 2.7e-61
GPFJAPFD_01557 2.8e-54
GPFJAPFD_01559 5.3e-284 S Caudovirus prohead serine protease
GPFJAPFD_01560 1.1e-209 S Phage portal protein
GPFJAPFD_01561 1.2e-277 S Terminase
GPFJAPFD_01563 1.3e-139 L HNH endonuclease
GPFJAPFD_01565 1.2e-57
GPFJAPFD_01571 2.2e-14 K BetR domain
GPFJAPFD_01573 5.4e-208 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
GPFJAPFD_01574 2e-146 atpB C it plays a direct role in the translocation of protons across the membrane
GPFJAPFD_01575 8.9e-31 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GPFJAPFD_01576 4.4e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GPFJAPFD_01577 4.5e-149 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GPFJAPFD_01578 3.8e-309 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GPFJAPFD_01579 1.6e-163 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GPFJAPFD_01580 5.6e-283 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GPFJAPFD_01581 2.3e-44 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
GPFJAPFD_01582 2.3e-122 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
GPFJAPFD_01583 6.8e-149 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
GPFJAPFD_01584 1.8e-194
GPFJAPFD_01585 1.7e-179
GPFJAPFD_01586 3e-168 trxA2 O Tetratricopeptide repeat
GPFJAPFD_01587 4.7e-122 cyaA 4.6.1.1 S CYTH
GPFJAPFD_01589 8e-64 psp1 3.5.99.10 J Endoribonuclease L-PSP
GPFJAPFD_01590 4.8e-271 mmuP E amino acid
GPFJAPFD_01591 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
GPFJAPFD_01592 1.7e-298 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
GPFJAPFD_01593 5.5e-242 hom 1.1.1.3 E Homoserine dehydrogenase
GPFJAPFD_01594 1.4e-189 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
GPFJAPFD_01595 2.4e-286 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
GPFJAPFD_01596 2.1e-210 K helix_turn _helix lactose operon repressor
GPFJAPFD_01597 0.0 araB 2.7.1.16, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
GPFJAPFD_01598 1e-130 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
GPFJAPFD_01599 6.3e-298 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
GPFJAPFD_01600 0.0 fadD 6.2.1.3 I AMP-binding enzyme
GPFJAPFD_01601 0.0 cydD V ABC transporter transmembrane region
GPFJAPFD_01602 1.5e-155 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
GPFJAPFD_01603 1e-128 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
GPFJAPFD_01604 9.1e-240 G Bacterial extracellular solute-binding protein
GPFJAPFD_01605 1.4e-154 G Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01606 1e-163 G ABC transporter permease
GPFJAPFD_01607 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GPFJAPFD_01608 2.6e-197 K helix_turn _helix lactose operon repressor
GPFJAPFD_01609 2.1e-241 mntH P H( )-stimulated, divalent metal cation uptake system
GPFJAPFD_01610 5.5e-166 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
GPFJAPFD_01611 2.1e-116 L Protein of unknown function (DUF1524)
GPFJAPFD_01612 1.2e-244 T Diguanylate cyclase (GGDEF) domain protein
GPFJAPFD_01613 2.3e-284 EGP Major facilitator Superfamily
GPFJAPFD_01614 4.8e-46
GPFJAPFD_01615 4.2e-181 S Endonuclease/Exonuclease/phosphatase family
GPFJAPFD_01616 2e-85 3.1.3.48 T Low molecular weight phosphatase family
GPFJAPFD_01617 1.6e-223 pflA S Protein of unknown function (DUF4012)
GPFJAPFD_01618 1.4e-190 wcoI DM Psort location CytoplasmicMembrane, score
GPFJAPFD_01619 6.5e-19
GPFJAPFD_01620 1.9e-162
GPFJAPFD_01621 5.5e-43 V Abi-like protein
GPFJAPFD_01622 4.9e-310 O Subtilase family
GPFJAPFD_01623 2.3e-145 O ATPase family associated with various cellular activities (AAA)
GPFJAPFD_01624 6.2e-13 S YjzC-like protein
GPFJAPFD_01625 2.5e-136 G Acyltransferase family
GPFJAPFD_01626 7.7e-217 rfbX S polysaccharide biosynthetic process
GPFJAPFD_01627 7.8e-63 M Glycosyltransferase like family 2
GPFJAPFD_01628 5e-212 S Polysaccharide pyruvyl transferase
GPFJAPFD_01629 7.9e-199 S Glycosyltransferase like family 2
GPFJAPFD_01630 5.5e-61
GPFJAPFD_01631 1.2e-127 cps1D M Domain of unknown function (DUF4422)
GPFJAPFD_01632 9.7e-211 M Domain of unknown function (DUF1972)
GPFJAPFD_01633 3.8e-222 M Glycosyl transferase 4-like domain
GPFJAPFD_01634 1.1e-50 M Glycosyl transferase 4-like domain
GPFJAPFD_01635 1.8e-91 epsJ GT2 S Glycosyltransferase, group 2 family protein
GPFJAPFD_01636 6.4e-97 S Psort location CytoplasmicMembrane, score
GPFJAPFD_01637 5e-86 M Glycosyltransferase like family 2
GPFJAPFD_01638 3.2e-125
GPFJAPFD_01639 6.9e-85 S Hexapeptide repeat of succinyl-transferase
GPFJAPFD_01640 9.1e-129 S Psort location CytoplasmicMembrane, score 9.99
GPFJAPFD_01641 6.3e-57 2.7.8.12 M Glycosyltransferase like family 2
GPFJAPFD_01642 5.8e-72 L PFAM Integrase catalytic
GPFJAPFD_01643 1.8e-32 L Transposase
GPFJAPFD_01644 0.0 C Domain of unknown function (DUF4365)
GPFJAPFD_01645 7e-57 S enterobacterial common antigen metabolic process
GPFJAPFD_01646 1e-41 S enterobacterial common antigen metabolic process
GPFJAPFD_01652 2.3e-57
GPFJAPFD_01653 2.6e-21
GPFJAPFD_01654 1.3e-31
GPFJAPFD_01656 2e-218 S AAA domain, putative AbiEii toxin, Type IV TA system
GPFJAPFD_01657 1.8e-120 S RloB-like protein
GPFJAPFD_01659 9e-114 V Abi-like protein
GPFJAPFD_01660 1.7e-55 yccF S Inner membrane component domain
GPFJAPFD_01661 0.0 3.2.1.177 GH31 G Belongs to the glycosyl hydrolase 31 family
GPFJAPFD_01662 6.6e-145 G Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01663 1.4e-162 G PFAM binding-protein-dependent transport systems inner membrane component
GPFJAPFD_01664 8.8e-223 G Bacterial extracellular solute-binding protein
GPFJAPFD_01665 3.2e-181 K helix_turn _helix lactose operon repressor
GPFJAPFD_01666 1.4e-184 K Psort location Cytoplasmic, score
GPFJAPFD_01667 3e-270 G Bacterial extracellular solute-binding protein
GPFJAPFD_01668 1.7e-162 P Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01669 6.5e-148 P Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01670 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
GPFJAPFD_01671 2.4e-55 rfbP M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
GPFJAPFD_01672 1.1e-176 rfbP M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
GPFJAPFD_01674 1e-87
GPFJAPFD_01675 1.6e-169 S G5
GPFJAPFD_01677 3.9e-60 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
GPFJAPFD_01678 4.5e-114 F Domain of unknown function (DUF4916)
GPFJAPFD_01679 3.4e-160 mhpC I Alpha/beta hydrolase family
GPFJAPFD_01680 2.1e-207 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
GPFJAPFD_01681 1e-69 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
GPFJAPFD_01682 1.5e-236 S Uncharacterized conserved protein (DUF2183)
GPFJAPFD_01683 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
GPFJAPFD_01684 8.4e-193 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
GPFJAPFD_01685 2.9e-86 J TM2 domain
GPFJAPFD_01686 3.5e-216 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
GPFJAPFD_01687 2.3e-133 glxR K helix_turn_helix, cAMP Regulatory protein
GPFJAPFD_01688 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
GPFJAPFD_01689 3e-220 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
GPFJAPFD_01690 2e-227 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
GPFJAPFD_01691 3.4e-141 glpR K DeoR C terminal sensor domain
GPFJAPFD_01692 4e-250 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
GPFJAPFD_01693 9e-234 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
GPFJAPFD_01695 6.4e-309 G Bacterial extracellular solute-binding protein
GPFJAPFD_01696 1.6e-177 G Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01697 3.4e-169 G Binding-protein-dependent transport system inner membrane component
GPFJAPFD_01698 3.5e-115 S Protein of unknown function, DUF624
GPFJAPFD_01699 2.3e-177 K helix_turn _helix lactose operon repressor
GPFJAPFD_01700 0.0 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
GPFJAPFD_01701 7.1e-43 gcvR T Belongs to the UPF0237 family
GPFJAPFD_01702 7.2e-253 S UPF0210 protein
GPFJAPFD_01703 3.3e-126 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
GPFJAPFD_01704 3.5e-182 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
GPFJAPFD_01705 6.8e-100
GPFJAPFD_01706 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GPFJAPFD_01707 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GPFJAPFD_01708 1.1e-101 T Forkhead associated domain
GPFJAPFD_01709 1.7e-104 B Belongs to the OprB family
GPFJAPFD_01710 4.4e-163 3.1.3.16 T Sigma factor PP2C-like phosphatases
GPFJAPFD_01711 0.0 E Transglutaminase-like superfamily
GPFJAPFD_01712 4.1e-220 S Protein of unknown function DUF58
GPFJAPFD_01713 2.2e-230 S ATPase family associated with various cellular activities (AAA)
GPFJAPFD_01714 0.0 S Fibronectin type 3 domain
GPFJAPFD_01715 6.8e-262 KLT Protein tyrosine kinase
GPFJAPFD_01716 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
GPFJAPFD_01717 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
GPFJAPFD_01718 2.3e-246 G Major Facilitator Superfamily
GPFJAPFD_01719 1.4e-133 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
GPFJAPFD_01720 1.1e-38 csoR S Metal-sensitive transcriptional repressor
GPFJAPFD_01721 0.0 pacS 3.6.3.54 P E1-E2 ATPase
GPFJAPFD_01722 9.5e-175 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GPFJAPFD_01723 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GPFJAPFD_01725 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
GPFJAPFD_01726 1e-254 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GPFJAPFD_01727 5.2e-116 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GPFJAPFD_01728 1.7e-290 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
GPFJAPFD_01729 1e-10
GPFJAPFD_01730 6e-29 EGP Major facilitator Superfamily
GPFJAPFD_01731 7.6e-101 EGP Major facilitator Superfamily
GPFJAPFD_01733 5.6e-59
GPFJAPFD_01734 1.3e-299 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
GPFJAPFD_01735 1e-10
GPFJAPFD_01736 1e-70
GPFJAPFD_01737 2.6e-258 S AAA domain
GPFJAPFD_01738 1.7e-189 lytC 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
GPFJAPFD_01739 1.8e-84 S enterobacterial common antigen metabolic process
GPFJAPFD_01740 2.2e-128 mprF S Lysylphosphatidylglycerol synthase TM region
GPFJAPFD_01741 1.5e-163 M Glycosyl transferases group 1
GPFJAPFD_01742 1.9e-170 M Glycosyl transferase family 2
GPFJAPFD_01743 6e-92
GPFJAPFD_01744 0.0 wbbM M Glycosyl transferase family 8
GPFJAPFD_01745 2e-100 M Glycosyltransferase like family 2
GPFJAPFD_01746 4.8e-223 GT2,GT4 M Glycosyl transferase family 2
GPFJAPFD_01747 1.6e-201 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
GPFJAPFD_01748 3.3e-123 rgpC U Transport permease protein
GPFJAPFD_01749 2.5e-127
GPFJAPFD_01750 2.8e-308 GT2,GT4 M Glycosyl transferase family 2
GPFJAPFD_01751 0.0 wbbM M Glycosyl transferase family 8
GPFJAPFD_01752 2.2e-157 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
GPFJAPFD_01753 2.6e-261 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
GPFJAPFD_01754 1.6e-196 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
GPFJAPFD_01755 3.8e-127
GPFJAPFD_01756 1.8e-197 1.1.1.22 M UDP binding domain
GPFJAPFD_01757 4.2e-133 ykoT 2.4.1.83 GT2 M Glycosyl transferase family 2
GPFJAPFD_01758 3.2e-63 S oligosaccharyl transferase activity
GPFJAPFD_01759 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
GPFJAPFD_01760 1.6e-255 S Domain of unknown function (DUF4143)
GPFJAPFD_01761 8.3e-232 S AAA domain
GPFJAPFD_01762 1e-60
GPFJAPFD_01763 1.1e-197 K helix_turn _helix lactose operon repressor
GPFJAPFD_01764 5.5e-167 iunH2 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
GPFJAPFD_01765 1.1e-259 EGP Major Facilitator Superfamily
GPFJAPFD_01766 5.7e-175 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GPFJAPFD_01767 3.3e-186 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GPFJAPFD_01768 2.5e-46 rpsF J Binds together with S18 to 16S ribosomal RNA
GPFJAPFD_01769 3.8e-66 ssb1 L Single-stranded DNA-binding protein
GPFJAPFD_01770 3.5e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GPFJAPFD_01771 1.7e-70 rplI J Binds to the 23S rRNA
GPFJAPFD_01773 9.2e-130 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
GPFJAPFD_01774 4.2e-09 M Protein of unknown function (DUF3152)
GPFJAPFD_01775 1.5e-54 M Protein of unknown function (DUF3152)
GPFJAPFD_01776 5.3e-209 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
GPFJAPFD_01777 2.1e-67
GPFJAPFD_01778 6.5e-148 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
GPFJAPFD_01779 5.2e-164 fahA Q Fumarylacetoacetate (FAA) hydrolase family
GPFJAPFD_01780 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GPFJAPFD_01781 8e-136 3.6.3.3, 3.6.3.5, 3.6.3.54 P Heavy metal translocating P-type atpase
GPFJAPFD_01782 1.1e-168 rmuC S RmuC family
GPFJAPFD_01783 2.7e-104 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GPFJAPFD_01784 3.1e-133 spoU 2.1.1.185 J RNA methyltransferase TrmH family
GPFJAPFD_01785 3.6e-134 K Psort location Cytoplasmic, score
GPFJAPFD_01786 5e-46 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GPFJAPFD_01787 8.6e-287 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
GPFJAPFD_01788 5.6e-283 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GPFJAPFD_01789 2.7e-205 2.3.1.57 J Acetyltransferase (GNAT) domain
GPFJAPFD_01790 2.1e-51 S Protein of unknown function (DUF2469)
GPFJAPFD_01791 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
GPFJAPFD_01792 1.9e-247 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
GPFJAPFD_01793 8.2e-79 K helix_turn_helix ASNC type
GPFJAPFD_01794 1e-69 tyrA 5.4.99.5 E Chorismate mutase type II
GPFJAPFD_01795 0.0 S domain protein
GPFJAPFD_01796 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
GPFJAPFD_01797 5.4e-289 E Bacterial extracellular solute-binding proteins, family 5 Middle
GPFJAPFD_01798 3.2e-123 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GPFJAPFD_01799 4.9e-134 KT Transcriptional regulatory protein, C terminal
GPFJAPFD_01800 4.9e-134
GPFJAPFD_01801 9.4e-98 mntP P Probably functions as a manganese efflux pump
GPFJAPFD_01802 3.4e-91 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
GPFJAPFD_01803 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
GPFJAPFD_01804 1e-173 M LPXTG-motif cell wall anchor domain protein
GPFJAPFD_01805 0.0 oxc 4.1.1.8 EH Thiamine pyrophosphate enzyme, central domain
GPFJAPFD_01806 3.3e-192 yfdV S Membrane transport protein
GPFJAPFD_01807 5e-273 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
GPFJAPFD_01808 4.4e-160 L Phage integrase family
GPFJAPFD_01809 2.6e-12
GPFJAPFD_01810 1.6e-58 3.2.1.20, 3.5.1.28 GH31 V N-acetylmuramoyl-L-alanine amidase
GPFJAPFD_01811 7.8e-08
GPFJAPFD_01812 3.6e-13

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)