ORF_ID e_value Gene_name EC_number CAZy COGs Description
NAMMBBDB_00001 0.0 3.2.1.21 GH3 G Fibronectin type III-like domain
NAMMBBDB_00002 0.0 KLT Protein tyrosine kinase
NAMMBBDB_00003 7.5e-151 O Thioredoxin
NAMMBBDB_00005 1.6e-197 S G5
NAMMBBDB_00006 2e-166 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
NAMMBBDB_00007 9.6e-169 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
NAMMBBDB_00008 2.6e-109 S LytR cell envelope-related transcriptional attenuator
NAMMBBDB_00009 1.7e-284 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
NAMMBBDB_00010 1.8e-121 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
NAMMBBDB_00011 0.0 M Conserved repeat domain
NAMMBBDB_00012 6e-305 murJ KLT MviN-like protein
NAMMBBDB_00013 0.0 murJ KLT MviN-like protein
NAMMBBDB_00014 1e-159 S Domain of unknown function (DUF4143)
NAMMBBDB_00015 8.3e-119 yorS 3.1.3.5 S 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
NAMMBBDB_00017 7e-14 S Psort location Extracellular, score 8.82
NAMMBBDB_00018 5.9e-180 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
NAMMBBDB_00019 6.8e-203 parB K Belongs to the ParB family
NAMMBBDB_00020 1.4e-170 parA D CobQ CobB MinD ParA nucleotide binding domain protein
NAMMBBDB_00021 1.2e-127 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
NAMMBBDB_00022 3.6e-91 jag S Putative single-stranded nucleic acids-binding domain
NAMMBBDB_00023 3.9e-190 yidC U Membrane protein insertase, YidC Oxa1 family
NAMMBBDB_00024 5.9e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
NAMMBBDB_00025 2.9e-306 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
NAMMBBDB_00026 3e-204 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
NAMMBBDB_00027 1.3e-235 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
NAMMBBDB_00028 6.2e-90 S Protein of unknown function (DUF721)
NAMMBBDB_00029 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NAMMBBDB_00030 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NAMMBBDB_00031 3.3e-68 S Transmembrane domain of unknown function (DUF3566)
NAMMBBDB_00032 1.2e-260 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
NAMMBBDB_00033 2.9e-58 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
NAMMBBDB_00037 9.1e-100 S Protein of unknown function DUF45
NAMMBBDB_00038 2.6e-188 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
NAMMBBDB_00039 2.8e-241 ytfL P Transporter associated domain
NAMMBBDB_00040 2e-118 cah 4.2.1.1 P Reversible hydration of carbon dioxide
NAMMBBDB_00041 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
NAMMBBDB_00042 0.0 yjjP S Threonine/Serine exporter, ThrE
NAMMBBDB_00043 9.4e-300 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
NAMMBBDB_00044 5.9e-205 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
NAMMBBDB_00045 2.9e-42 S Protein of unknown function (DUF3073)
NAMMBBDB_00046 1.7e-63 I Sterol carrier protein
NAMMBBDB_00047 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
NAMMBBDB_00048 3.4e-35
NAMMBBDB_00049 8.5e-129 gluP 3.4.21.105 S Rhomboid family
NAMMBBDB_00051 2.5e-240 L ribosomal rna small subunit methyltransferase
NAMMBBDB_00052 3.1e-57 crgA D Involved in cell division
NAMMBBDB_00053 6.8e-142 S Bacterial protein of unknown function (DUF881)
NAMMBBDB_00054 6.7e-209 srtA 3.4.22.70 M Sortase family
NAMMBBDB_00055 1.9e-118 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
NAMMBBDB_00056 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
NAMMBBDB_00057 5.8e-177 T Protein tyrosine kinase
NAMMBBDB_00058 2.7e-266 pbpA M penicillin-binding protein
NAMMBBDB_00059 2.7e-264 rodA D Belongs to the SEDS family
NAMMBBDB_00060 6.7e-242 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
NAMMBBDB_00061 9.6e-73 fhaB T Inner membrane component of T3SS, cytoplasmic domain
NAMMBBDB_00062 1.2e-131 fhaA T Protein of unknown function (DUF2662)
NAMMBBDB_00063 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
NAMMBBDB_00064 9.6e-39 2.7.13.3 T Histidine kinase
NAMMBBDB_00065 4.3e-151 2.7.13.3 T Histidine kinase
NAMMBBDB_00066 3.2e-113 K helix_turn_helix, Lux Regulon
NAMMBBDB_00067 3.9e-193 pldB 3.1.1.5 I Serine aminopeptidase, S33
NAMMBBDB_00068 8.8e-160 yicL EG EamA-like transporter family
NAMMBBDB_00069 5.4e-86 XK27_10430 S NAD(P)H-binding
NAMMBBDB_00070 7.8e-44 ydeP K HxlR-like helix-turn-helix
NAMMBBDB_00073 9.4e-269 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
NAMMBBDB_00074 3.2e-286 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
NAMMBBDB_00075 0.0 cadA P E1-E2 ATPase
NAMMBBDB_00076 3e-187 ansA 3.5.1.1 EJ Asparaginase
NAMMBBDB_00077 3.1e-270 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
NAMMBBDB_00078 2.7e-170 htpX O Belongs to the peptidase M48B family
NAMMBBDB_00080 3.8e-187 K Helix-turn-helix XRE-family like proteins
NAMMBBDB_00081 6.3e-171 yddG EG EamA-like transporter family
NAMMBBDB_00082 0.0 pip S YhgE Pip domain protein
NAMMBBDB_00083 0.0 pip S YhgE Pip domain protein
NAMMBBDB_00084 1.8e-206 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
NAMMBBDB_00085 3.5e-249 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
NAMMBBDB_00086 1.1e-297 clcA P Voltage gated chloride channel
NAMMBBDB_00087 9.1e-118 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NAMMBBDB_00088 3.3e-57 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NAMMBBDB_00089 1.4e-29 E Receptor family ligand binding region
NAMMBBDB_00090 1.8e-198 K helix_turn _helix lactose operon repressor
NAMMBBDB_00091 1.7e-295 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
NAMMBBDB_00092 1.5e-115 S Protein of unknown function, DUF624
NAMMBBDB_00093 0.0 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
NAMMBBDB_00094 6.6e-224 G Bacterial extracellular solute-binding protein
NAMMBBDB_00095 2.4e-161 amyD3 P Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00096 1.6e-149 amyC5 P Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00097 1.5e-278 scrT G Transporter major facilitator family protein
NAMMBBDB_00098 1.5e-242 yhjE EGP Sugar (and other) transporter
NAMMBBDB_00099 1.5e-202 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
NAMMBBDB_00100 3.4e-202 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
NAMMBBDB_00101 0.0 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
NAMMBBDB_00102 3.7e-34 G beta-mannosidase
NAMMBBDB_00103 6.8e-187 K helix_turn _helix lactose operon repressor
NAMMBBDB_00104 7.5e-13 S Protein of unknown function, DUF624
NAMMBBDB_00105 4.1e-270 aroP E aromatic amino acid transport protein AroP K03293
NAMMBBDB_00106 0.0 V FtsX-like permease family
NAMMBBDB_00107 3.3e-227 P Sodium/hydrogen exchanger family
NAMMBBDB_00109 3.5e-280 cycA E Amino acid permease
NAMMBBDB_00110 1.2e-166 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
NAMMBBDB_00111 2.6e-129 thiF 2.7.7.73, 2.7.7.80 H ThiF family
NAMMBBDB_00112 2.5e-26 thiS 2.8.1.10 H ThiS family
NAMMBBDB_00113 1.8e-182 1.1.1.65 C Aldo/keto reductase family
NAMMBBDB_00114 1.9e-57 ydgJ K helix_turn_helix multiple antibiotic resistance protein
NAMMBBDB_00115 2.7e-285 lmrA1 V ABC transporter, ATP-binding protein
NAMMBBDB_00116 0.0 lmrA2 V ABC transporter transmembrane region
NAMMBBDB_00117 2.6e-116 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
NAMMBBDB_00118 4.4e-237 G MFS/sugar transport protein
NAMMBBDB_00119 9.2e-293 efeU_1 P Iron permease FTR1 family
NAMMBBDB_00120 3e-95 tpd P Fe2+ transport protein
NAMMBBDB_00121 1.5e-231 S Predicted membrane protein (DUF2318)
NAMMBBDB_00122 1.5e-218 macB_2 V ABC transporter permease
NAMMBBDB_00124 1.7e-200 Z012_06715 V FtsX-like permease family
NAMMBBDB_00125 1.7e-148 macB V ABC transporter, ATP-binding protein
NAMMBBDB_00126 1.1e-61 S FMN_bind
NAMMBBDB_00127 9.2e-89 K Psort location Cytoplasmic, score 8.87
NAMMBBDB_00128 1.4e-274 pip S YhgE Pip domain protein
NAMMBBDB_00129 0.0 pip S YhgE Pip domain protein
NAMMBBDB_00130 1.6e-225 S Putative ABC-transporter type IV
NAMMBBDB_00131 6e-38 nrdH O Glutaredoxin
NAMMBBDB_00134 8.1e-299 pepD E Peptidase family C69
NAMMBBDB_00135 1.5e-194 XK27_01805 M Glycosyltransferase like family 2
NAMMBBDB_00137 4.9e-108 icaR K Bacterial regulatory proteins, tetR family
NAMMBBDB_00139 8.6e-168 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
NAMMBBDB_00140 1.2e-236 amt U Ammonium Transporter Family
NAMMBBDB_00141 1e-54 glnB K Nitrogen regulatory protein P-II
NAMMBBDB_00142 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
NAMMBBDB_00143 3.3e-248 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
NAMMBBDB_00144 1.3e-250 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
NAMMBBDB_00145 1.2e-143 cobQ S CobB/CobQ-like glutamine amidotransferase domain
NAMMBBDB_00146 1e-27 S granule-associated protein
NAMMBBDB_00147 0.0 ubiB S ABC1 family
NAMMBBDB_00148 9.1e-192 K Periplasmic binding protein domain
NAMMBBDB_00149 2.8e-241 G Bacterial extracellular solute-binding protein
NAMMBBDB_00150 4e-07 P Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00151 3.1e-167 P Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00152 9.3e-147 G Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00153 0.0 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
NAMMBBDB_00154 0.0 sca1 3.2.1.187 GH121 DG Bacterial Ig-like domain (group 4)
NAMMBBDB_00155 4.8e-09 G Bacterial Ig-like domain (group 4)
NAMMBBDB_00156 1.1e-208 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
NAMMBBDB_00157 4.6e-117 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
NAMMBBDB_00158 7e-85
NAMMBBDB_00159 2.5e-208 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
NAMMBBDB_00160 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
NAMMBBDB_00162 5.5e-141 cpaE D bacterial-type flagellum organization
NAMMBBDB_00163 2.7e-185 cpaF U Type II IV secretion system protein
NAMMBBDB_00164 1.4e-125 U Type ii secretion system
NAMMBBDB_00165 7.4e-89 gspF NU Type II secretion system (T2SS), protein F
NAMMBBDB_00166 1.3e-42 S Protein of unknown function (DUF4244)
NAMMBBDB_00167 5.1e-60 U TadE-like protein
NAMMBBDB_00168 4.7e-56 S TIGRFAM helicase secretion neighborhood TadE-like protein
NAMMBBDB_00169 1.9e-214 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
NAMMBBDB_00170 1.6e-193 S Psort location CytoplasmicMembrane, score
NAMMBBDB_00171 1.1e-96 K Bacterial regulatory proteins, tetR family
NAMMBBDB_00172 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
NAMMBBDB_00173 2.2e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
NAMMBBDB_00174 3.4e-135 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
NAMMBBDB_00175 1.4e-96 askB 1.1.1.3, 2.7.2.4 E ACT domain
NAMMBBDB_00176 1.8e-209 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NAMMBBDB_00177 0.0 3.2.1.22 G lipolytic protein G-D-S-L family
NAMMBBDB_00178 1.9e-271 rafA 3.2.1.22 G Psort location Cytoplasmic, score 8.87
NAMMBBDB_00179 4.1e-232 G Bacterial extracellular solute-binding protein
NAMMBBDB_00180 5.7e-156 malC G Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00181 7.4e-142 G Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00182 2.7e-159 K Periplasmic binding protein domain
NAMMBBDB_00184 5.9e-46 K Acetyltransferase (GNAT) family
NAMMBBDB_00185 1.3e-23 S Protein of unknown function (DUF1778)
NAMMBBDB_00186 6.7e-07 2.7.13.3 T Histidine kinase
NAMMBBDB_00187 1e-45 K helix_turn_helix, Lux Regulon
NAMMBBDB_00188 3.8e-40
NAMMBBDB_00189 7.1e-115
NAMMBBDB_00190 1.1e-297 S Calcineurin-like phosphoesterase
NAMMBBDB_00191 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
NAMMBBDB_00192 0.0 3.2.1.99 GH43 G C-terminal of Glycosyl hydrolases family 43
NAMMBBDB_00193 2.1e-256 3.2.1.99 GH43 G C-terminal of Glycosyl hydrolases family 43
NAMMBBDB_00194 0.0 3.2.1.97 GH101 G Glycosyl hydrolases family 43
NAMMBBDB_00195 1.1e-195 K helix_turn _helix lactose operon repressor
NAMMBBDB_00196 1.3e-203 abf G Glycosyl hydrolases family 43
NAMMBBDB_00197 4.1e-292 G Bacterial extracellular solute-binding protein
NAMMBBDB_00198 4.6e-169 G Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00199 1.7e-163 G Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00200 1.9e-184 G beta-fructofuranosidase activity
NAMMBBDB_00201 2.9e-101 S Protein of unknown function, DUF624
NAMMBBDB_00202 1.1e-25 S Beta-L-arabinofuranosidase, GH127
NAMMBBDB_00203 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
NAMMBBDB_00204 2.7e-216 ino1 5.5.1.4 I Myo-inositol-1-phosphate synthase
NAMMBBDB_00205 0.0 S Psort location CytoplasmicMembrane, score 9.99
NAMMBBDB_00206 3.6e-241 V ABC transporter permease
NAMMBBDB_00207 8.4e-157 V ABC transporter
NAMMBBDB_00208 1.9e-149 T HD domain
NAMMBBDB_00209 1e-167 S Glutamine amidotransferase domain
NAMMBBDB_00210 0.0 kup P Transport of potassium into the cell
NAMMBBDB_00211 5e-184 tatD L TatD related DNase
NAMMBBDB_00212 0.0 G Alpha-L-arabinofuranosidase C-terminus
NAMMBBDB_00213 8.1e-22 rafA 3.2.1.22 G alpha-galactosidase
NAMMBBDB_00214 1.4e-223 K helix_turn _helix lactose operon repressor
NAMMBBDB_00215 0.0 rafA 3.2.1.22 G Psort location Cytoplasmic, score 8.87
NAMMBBDB_00216 8e-126
NAMMBBDB_00217 0.0 yknV V ABC transporter
NAMMBBDB_00218 0.0 mdlA2 V ABC transporter
NAMMBBDB_00219 5.3e-214 lipA I Hydrolase, alpha beta domain protein
NAMMBBDB_00220 5e-27 S Psort location Cytoplasmic, score 8.87
NAMMBBDB_00221 8.7e-153 I alpha/beta hydrolase fold
NAMMBBDB_00222 7.8e-232 M Protein of unknown function (DUF2961)
NAMMBBDB_00223 3.2e-153 P Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00224 3.2e-159 G Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00225 5.1e-256 G Bacterial extracellular solute-binding protein
NAMMBBDB_00226 2.2e-190 K helix_turn _helix lactose operon repressor
NAMMBBDB_00227 0.0 M probably involved in cell wall
NAMMBBDB_00228 1.3e-251 3.2.1.14 GH18 S Carbohydrate binding domain
NAMMBBDB_00229 0.0 T Diguanylate cyclase, GGDEF domain
NAMMBBDB_00230 2.5e-186 lacR K Transcriptional regulator, LacI family
NAMMBBDB_00231 2.8e-222 nagA 3.5.1.25 G Amidohydrolase family
NAMMBBDB_00232 1.2e-149 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
NAMMBBDB_00233 0.0 G Glycosyl hydrolase family 20, domain 2
NAMMBBDB_00234 3e-173 2.7.1.2 GK ROK family
NAMMBBDB_00235 1.1e-162 G ABC transporter permease
NAMMBBDB_00236 7.5e-147 G Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00237 3.7e-238 G Bacterial extracellular solute-binding protein
NAMMBBDB_00238 7.6e-208 GK ROK family
NAMMBBDB_00239 9.7e-262 lacS G Psort location CytoplasmicMembrane, score 10.00
NAMMBBDB_00240 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
NAMMBBDB_00241 4.1e-135 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4-amino-5-aminomethyl-2-methylpyrimidine to 4-amino- 5-hydroxymethyl-2-methylpyrimidine (HMP)
NAMMBBDB_00243 0.0 cbgA_1 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
NAMMBBDB_00244 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NAMMBBDB_00245 6.6e-107
NAMMBBDB_00246 6.1e-191 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
NAMMBBDB_00247 4.3e-18 3.2.1.78 GH26 G Glycosyl hydrolase family 26
NAMMBBDB_00248 5.8e-126 dedA S SNARE associated Golgi protein
NAMMBBDB_00250 8.7e-130 S HAD hydrolase, family IA, variant 3
NAMMBBDB_00251 8.6e-47
NAMMBBDB_00252 4.5e-115 hspR K transcriptional regulator, MerR family
NAMMBBDB_00253 1.7e-174 dnaJ1 O DnaJ molecular chaperone homology domain
NAMMBBDB_00254 2.8e-48 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
NAMMBBDB_00255 0.0 dnaK O Heat shock 70 kDa protein
NAMMBBDB_00256 1.3e-145 S Mitochondrial biogenesis AIM24
NAMMBBDB_00257 2.3e-57 phoA 3.1.3.1, 3.1.3.39 P Alkaline phosphatase homologues
NAMMBBDB_00258 1e-125 S membrane transporter protein
NAMMBBDB_00260 8.3e-193 K Psort location Cytoplasmic, score
NAMMBBDB_00261 6.2e-138 traX S TraX protein
NAMMBBDB_00262 5.4e-144 S HAD-hyrolase-like
NAMMBBDB_00263 2.6e-294 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
NAMMBBDB_00264 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
NAMMBBDB_00265 4.9e-105 S Protein of unknown function, DUF624
NAMMBBDB_00266 4e-153 rafG G ABC transporter permease
NAMMBBDB_00267 3.7e-154 msmF G Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00268 3.2e-181 K Psort location Cytoplasmic, score
NAMMBBDB_00269 1.9e-184 K Periplasmic binding protein-like domain
NAMMBBDB_00270 1.4e-264 amyE G Bacterial extracellular solute-binding protein
NAMMBBDB_00271 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
NAMMBBDB_00272 2.5e-247 amyE G Bacterial extracellular solute-binding protein
NAMMBBDB_00273 2.9e-136 G Phosphoglycerate mutase family
NAMMBBDB_00274 1.9e-62 S Protein of unknown function (DUF4235)
NAMMBBDB_00275 3.9e-142 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
NAMMBBDB_00276 3.5e-44
NAMMBBDB_00277 5.7e-85 K Cro/C1-type HTH DNA-binding domain
NAMMBBDB_00278 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
NAMMBBDB_00279 2.4e-122 E GDSL-like Lipase/Acylhydrolase family
NAMMBBDB_00280 1.4e-94 S Serine aminopeptidase, S33
NAMMBBDB_00281 1.7e-163 iolF EGP Major facilitator Superfamily
NAMMBBDB_00282 1.6e-85 I alpha/beta hydrolase fold
NAMMBBDB_00283 2.2e-93 K Periplasmic binding protein domain
NAMMBBDB_00284 7.8e-45 tnp7109-21 L Integrase core domain
NAMMBBDB_00285 1.1e-198 bglA 3.2.1.21 G Glycosyl hydrolase family 1
NAMMBBDB_00286 0.0 3.2.1.177 GH31 G Belongs to the glycosyl hydrolase 31 family
NAMMBBDB_00287 4.8e-141 P Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00288 9.6e-159 G Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00289 8.3e-214 G Bacterial extracellular solute-binding protein
NAMMBBDB_00290 8.4e-90 K helix_turn _helix lactose operon repressor
NAMMBBDB_00291 1.1e-111 S Short repeat of unknown function (DUF308)
NAMMBBDB_00292 2.5e-47 S Antitoxin component of a toxin-antitoxin (TA) module
NAMMBBDB_00293 1.6e-52 DJ Addiction module toxin, RelE StbE family
NAMMBBDB_00294 3.5e-13 S Psort location Extracellular, score 8.82
NAMMBBDB_00296 2e-256 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
NAMMBBDB_00297 3.5e-13 S Psort location Extracellular, score 8.82
NAMMBBDB_00298 6.2e-230 EGP Major facilitator Superfamily
NAMMBBDB_00299 6.8e-176 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NAMMBBDB_00300 2.9e-265 KLT Domain of unknown function (DUF4032)
NAMMBBDB_00301 2.1e-210 ugpC E Belongs to the ABC transporter superfamily
NAMMBBDB_00302 2.7e-25 T GHKL domain
NAMMBBDB_00303 6.3e-206 clcA_2 P Voltage gated chloride channel
NAMMBBDB_00304 7.6e-180 S Psort location Cytoplasmic, score
NAMMBBDB_00305 5.8e-34 S GtrA-like protein
NAMMBBDB_00306 5.5e-116 3.6.1.27 I Psort location CytoplasmicMembrane, score
NAMMBBDB_00307 4e-80 ypeA 2.3.1.1 K Psort location Cytoplasmic, score 8.87
NAMMBBDB_00308 2.2e-111 vex2 V ABC transporter, ATP-binding protein
NAMMBBDB_00309 2.6e-209 vex1 V Efflux ABC transporter, permease protein
NAMMBBDB_00310 2.9e-241 vex3 V ABC transporter permease
NAMMBBDB_00311 1.8e-24 G Major facilitator Superfamily
NAMMBBDB_00312 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
NAMMBBDB_00313 3e-187 lacR K Transcriptional regulator, LacI family
NAMMBBDB_00314 0.0 3.2.1.51 GH95 G Glycosyl hydrolase family 65, N-terminal domain
NAMMBBDB_00315 4e-167 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
NAMMBBDB_00316 4.3e-160 S Amidohydrolase
NAMMBBDB_00317 5.8e-146 IQ KR domain
NAMMBBDB_00318 4e-245 4.2.1.68 M Enolase C-terminal domain-like
NAMMBBDB_00319 4.4e-266 G Bacterial extracellular solute-binding protein
NAMMBBDB_00320 1.1e-175 P Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00321 2.4e-156 P Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00322 6e-191 K Bacterial regulatory proteins, lacI family
NAMMBBDB_00323 2.3e-53 lacZ5 3.2.1.23 G beta-galactosidase activity
NAMMBBDB_00324 4.4e-263 G Bacterial extracellular solute-binding protein
NAMMBBDB_00325 9.6e-135 K helix_turn _helix lactose operon repressor
NAMMBBDB_00326 8.3e-110 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
NAMMBBDB_00327 3e-13 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
NAMMBBDB_00328 4.5e-85 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
NAMMBBDB_00329 4.9e-35 G ABC transporter permease
NAMMBBDB_00330 3.8e-12 S Psort location Extracellular, score 8.82
NAMMBBDB_00331 0.0 trxB1 1.8.1.9 C Thioredoxin domain
NAMMBBDB_00332 1.7e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
NAMMBBDB_00333 7.1e-86 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
NAMMBBDB_00334 4.1e-234 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
NAMMBBDB_00335 8.9e-144 cobB2 K Sir2 family
NAMMBBDB_00337 9e-172 I alpha/beta hydrolase fold
NAMMBBDB_00338 3.1e-28 G ABC transporter permease
NAMMBBDB_00339 4.8e-38 G ABC transporter permease
NAMMBBDB_00340 4.1e-107 G Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00341 6.7e-191 3.6.1.27 I PAP2 superfamily
NAMMBBDB_00342 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NAMMBBDB_00343 1.2e-107 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
NAMMBBDB_00344 3.9e-191 holB 2.7.7.7 L DNA polymerase III
NAMMBBDB_00345 5.4e-184 K helix_turn _helix lactose operon repressor
NAMMBBDB_00346 6e-39 ptsH G PTS HPr component phosphorylation site
NAMMBBDB_00347 8.6e-285 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NAMMBBDB_00348 1.1e-106 S Phosphatidylethanolamine-binding protein
NAMMBBDB_00349 0.0 pepD E Peptidase family C69
NAMMBBDB_00350 9.1e-289 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
NAMMBBDB_00351 6.7e-62 S Macrophage migration inhibitory factor (MIF)
NAMMBBDB_00352 7.1e-95 S GtrA-like protein
NAMMBBDB_00353 1e-262 EGP Major facilitator Superfamily
NAMMBBDB_00354 7.5e-123 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
NAMMBBDB_00355 7e-184
NAMMBBDB_00356 4.1e-99 S Protein of unknown function (DUF805)
NAMMBBDB_00357 5.5e-297 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NAMMBBDB_00360 2.9e-279 S Calcineurin-like phosphoesterase
NAMMBBDB_00361 1.1e-139 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
NAMMBBDB_00362 7.1e-272 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
NAMMBBDB_00363 1.3e-131 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
NAMMBBDB_00364 3.6e-200 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
NAMMBBDB_00365 1e-256 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NAMMBBDB_00366 2.3e-175 plsC2 2.3.1.51 I Phosphate acyltransferases
NAMMBBDB_00367 1.7e-179 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
NAMMBBDB_00368 2.2e-218 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
NAMMBBDB_00369 2.4e-177 S CAAX protease self-immunity
NAMMBBDB_00370 1.7e-137 M Mechanosensitive ion channel
NAMMBBDB_00371 3.8e-229 MA20_36090 S Psort location Cytoplasmic, score 8.87
NAMMBBDB_00372 2.4e-228 MA20_36090 S Psort location Cytoplasmic, score 8.87
NAMMBBDB_00373 4.5e-123 K Bacterial regulatory proteins, tetR family
NAMMBBDB_00374 1.6e-232 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
NAMMBBDB_00375 5.2e-167 gnd 1.1.1.343, 1.1.1.44 G 6-phosphogluconate dehydrogenase, C-terminal domain
NAMMBBDB_00377 6e-228 gnuT EG GntP family permease
NAMMBBDB_00378 5.6e-79 gntK 2.7.1.12 F Shikimate kinase
NAMMBBDB_00379 1.9e-127 gntR K FCD
NAMMBBDB_00380 4.9e-230 yxiO S Vacuole effluxer Atg22 like
NAMMBBDB_00381 0.0 S Psort location Cytoplasmic, score 8.87
NAMMBBDB_00382 8.4e-30 rpmB J Ribosomal L28 family
NAMMBBDB_00383 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
NAMMBBDB_00384 1.9e-104 rsmD 2.1.1.171 L Conserved hypothetical protein 95
NAMMBBDB_00385 3.1e-149 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
NAMMBBDB_00386 1.2e-106 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
NAMMBBDB_00387 1.8e-34 CP_0960 S Belongs to the UPF0109 family
NAMMBBDB_00388 3.9e-54 rpsP J Belongs to the bacterial ribosomal protein bS16 family
NAMMBBDB_00389 2.6e-178 S Endonuclease/Exonuclease/phosphatase family
NAMMBBDB_00390 2.7e-270 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NAMMBBDB_00391 1.9e-300 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
NAMMBBDB_00392 4.3e-152 guaA1 6.3.5.2 F Peptidase C26
NAMMBBDB_00393 0.0 yjjK S ABC transporter
NAMMBBDB_00394 1.1e-95
NAMMBBDB_00395 5.7e-92 ilvN 2.2.1.6 E ACT domain
NAMMBBDB_00396 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
NAMMBBDB_00397 4.8e-135 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
NAMMBBDB_00398 1e-19 rpmF J Belongs to the bacterial ribosomal protein bL32 family
NAMMBBDB_00399 1.8e-113 yceD S Uncharacterized ACR, COG1399
NAMMBBDB_00400 2.5e-133
NAMMBBDB_00401 7.7e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
NAMMBBDB_00402 7.2e-58 S Protein of unknown function (DUF3039)
NAMMBBDB_00403 1.7e-195 yghZ C Aldo/keto reductase family
NAMMBBDB_00404 3.2e-77 soxR K MerR, DNA binding
NAMMBBDB_00405 1.2e-120 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
NAMMBBDB_00406 1e-139 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
NAMMBBDB_00407 1.7e-251 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
NAMMBBDB_00408 1.7e-243 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
NAMMBBDB_00409 1.5e-220 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
NAMMBBDB_00412 1.3e-179 S Auxin Efflux Carrier
NAMMBBDB_00413 0.0 pgi 5.3.1.9 G Belongs to the GPI family
NAMMBBDB_00414 3e-60 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
NAMMBBDB_00415 1.1e-123 lepB 3.4.21.89 U Belongs to the peptidase S26 family
NAMMBBDB_00416 7.2e-138 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NAMMBBDB_00417 1.9e-127 V ATPases associated with a variety of cellular activities
NAMMBBDB_00418 5.7e-267 V Efflux ABC transporter, permease protein
NAMMBBDB_00419 9.7e-164 mdcF S Transporter, auxin efflux carrier (AEC) family protein
NAMMBBDB_00420 1.6e-227 dapE 3.5.1.18 E Peptidase dimerisation domain
NAMMBBDB_00421 1.5e-308 rne 3.1.26.12 J Ribonuclease E/G family
NAMMBBDB_00422 2.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
NAMMBBDB_00423 2.6e-39 rpmA J Ribosomal L27 protein
NAMMBBDB_00424 2.3e-311 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
NAMMBBDB_00425 3e-204 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
NAMMBBDB_00426 3.3e-233 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
NAMMBBDB_00428 1.2e-32 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
NAMMBBDB_00429 1.1e-128 nusG K Participates in transcription elongation, termination and antitermination
NAMMBBDB_00430 2.3e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
NAMMBBDB_00431 3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
NAMMBBDB_00432 5e-142 QT PucR C-terminal helix-turn-helix domain
NAMMBBDB_00433 0.0
NAMMBBDB_00434 3.9e-162 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
NAMMBBDB_00435 2.1e-79 bioY S BioY family
NAMMBBDB_00436 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
NAMMBBDB_00437 0.0 pccB I Carboxyl transferase domain
NAMMBBDB_00438 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
NAMMBBDB_00440 1.2e-82 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
NAMMBBDB_00441 0.0 ams 2.4.1.4, 3.2.1.1, 5.4.99.16 GH13 G Alpha amylase, catalytic domain
NAMMBBDB_00443 2.4e-116
NAMMBBDB_00444 1.7e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
NAMMBBDB_00445 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
NAMMBBDB_00446 8.5e-91 lemA S LemA family
NAMMBBDB_00447 0.0 S Predicted membrane protein (DUF2207)
NAMMBBDB_00448 3.7e-170 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
NAMMBBDB_00449 7e-297 yegQ O Peptidase family U32 C-terminal domain
NAMMBBDB_00450 5.3e-184 yfiH Q Multi-copper polyphenol oxidoreductase laccase
NAMMBBDB_00451 4.6e-143 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
NAMMBBDB_00452 3.4e-126 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
NAMMBBDB_00453 3.8e-58 D nuclear chromosome segregation
NAMMBBDB_00454 1.5e-266 pepC 3.4.22.40 E Peptidase C1-like family
NAMMBBDB_00455 9.7e-211 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NAMMBBDB_00456 3.7e-221 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
NAMMBBDB_00457 4e-122 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NAMMBBDB_00458 2e-218 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
NAMMBBDB_00459 4.9e-128 KT Transcriptional regulatory protein, C terminal
NAMMBBDB_00460 1.4e-196 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
NAMMBBDB_00461 7.5e-164 pstC P probably responsible for the translocation of the substrate across the membrane
NAMMBBDB_00462 2e-167 pstA P Phosphate transport system permease
NAMMBBDB_00463 3.6e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
NAMMBBDB_00464 1.8e-143 P Zinc-uptake complex component A periplasmic
NAMMBBDB_00465 1.3e-246 pbuO S Permease family
NAMMBBDB_00466 1.1e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
NAMMBBDB_00467 2.4e-36 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
NAMMBBDB_00468 4.7e-175 T Forkhead associated domain
NAMMBBDB_00469 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
NAMMBBDB_00470 4.8e-36
NAMMBBDB_00471 1.5e-92 flgA NO SAF
NAMMBBDB_00472 1.3e-29 fmdB S Putative regulatory protein
NAMMBBDB_00473 1.4e-100 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
NAMMBBDB_00474 2.3e-130 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
NAMMBBDB_00475 8.3e-152
NAMMBBDB_00476 2.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
NAMMBBDB_00480 5.5e-25 rpmG J Ribosomal protein L33
NAMMBBDB_00481 5.4e-204 murB 1.3.1.98 M Cell wall formation
NAMMBBDB_00482 1.3e-266 E aromatic amino acid transport protein AroP K03293
NAMMBBDB_00483 8.3e-59 fdxA C 4Fe-4S binding domain
NAMMBBDB_00484 3.9e-215 dapC E Aminotransferase class I and II
NAMMBBDB_00485 0.0 E Bacterial extracellular solute-binding proteins, family 5 Middle
NAMMBBDB_00486 3.1e-181 EP Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00487 1.1e-140 EP Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00488 5.1e-156 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
NAMMBBDB_00489 2.8e-151 dppF E ABC transporter
NAMMBBDB_00490 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
NAMMBBDB_00492 0.0 G Psort location Cytoplasmic, score 8.87
NAMMBBDB_00493 3.4e-232 3.2.1.156 GH8 G CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
NAMMBBDB_00494 0.0 G candidate polyfunctional acetylxylan esterase b-xylosidase A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein K01238
NAMMBBDB_00495 5.1e-297 CE10 I Belongs to the type-B carboxylesterase lipase family
NAMMBBDB_00497 4.4e-223 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NAMMBBDB_00498 4.7e-252 M Bacterial capsule synthesis protein PGA_cap
NAMMBBDB_00499 9.4e-186 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NAMMBBDB_00500 8.1e-114 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
NAMMBBDB_00501 9.9e-121
NAMMBBDB_00502 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
NAMMBBDB_00503 2.4e-80 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
NAMMBBDB_00504 3.4e-67 rpsI J Belongs to the universal ribosomal protein uS9 family
NAMMBBDB_00505 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
NAMMBBDB_00506 2.8e-177 tdh 1.1.1.14 C Zinc-binding dehydrogenase
NAMMBBDB_00507 3.2e-226 EGP Major facilitator Superfamily
NAMMBBDB_00508 1.6e-75 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
NAMMBBDB_00509 1e-215 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
NAMMBBDB_00510 2.8e-235 EGP Major facilitator Superfamily
NAMMBBDB_00511 9.5e-197 Z012_01000 1.1.1.14, 1.1.1.9 C Zinc-binding dehydrogenase
NAMMBBDB_00512 4.7e-182 rhaR_1 K helix_turn_helix, arabinose operon control protein
NAMMBBDB_00513 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
NAMMBBDB_00514 5.2e-50 rpsJ J Involved in the binding of tRNA to the ribosomes
NAMMBBDB_00515 2.3e-116 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
NAMMBBDB_00516 1.4e-116 rplD J Forms part of the polypeptide exit tunnel
NAMMBBDB_00517 6.8e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
NAMMBBDB_00518 6.1e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
NAMMBBDB_00519 1.3e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
NAMMBBDB_00520 1.9e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
NAMMBBDB_00521 1e-97 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
NAMMBBDB_00522 1.7e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
NAMMBBDB_00523 1.1e-37 rpmC J Belongs to the universal ribosomal protein uL29 family
NAMMBBDB_00524 4.9e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
NAMMBBDB_00525 3e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
NAMMBBDB_00526 8.7e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
NAMMBBDB_00527 7.5e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
NAMMBBDB_00528 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NAMMBBDB_00529 5.5e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
NAMMBBDB_00530 3.8e-96 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
NAMMBBDB_00531 3.3e-59 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
NAMMBBDB_00532 1.2e-92 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
NAMMBBDB_00533 3.4e-25 rpmD J Ribosomal protein L30p/L7e
NAMMBBDB_00534 9.8e-74 rplO J binds to the 23S rRNA
NAMMBBDB_00535 9.9e-239 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
NAMMBBDB_00536 5.5e-98 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
NAMMBBDB_00537 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
NAMMBBDB_00538 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
NAMMBBDB_00539 3.3e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
NAMMBBDB_00540 1.9e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
NAMMBBDB_00541 4.7e-185 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NAMMBBDB_00542 1.3e-66 rplQ J Ribosomal protein L17
NAMMBBDB_00543 4.4e-183 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
NAMMBBDB_00545 2.1e-80
NAMMBBDB_00546 6.1e-191 nusA K Participates in both transcription termination and antitermination
NAMMBBDB_00547 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
NAMMBBDB_00548 2.2e-69 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
NAMMBBDB_00549 4.3e-187 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
NAMMBBDB_00550 8.8e-218 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
NAMMBBDB_00551 4.1e-251 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
NAMMBBDB_00552 3.8e-108
NAMMBBDB_00554 2.4e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
NAMMBBDB_00555 7.8e-214 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NAMMBBDB_00556 1.5e-250 T GHKL domain
NAMMBBDB_00557 2.1e-151 T LytTr DNA-binding domain
NAMMBBDB_00558 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
NAMMBBDB_00559 0.0 crr G pts system, glucose-specific IIABC component
NAMMBBDB_00560 2.8e-157 arbG K CAT RNA binding domain
NAMMBBDB_00561 9.8e-200 I Diacylglycerol kinase catalytic domain
NAMMBBDB_00562 1.2e-247 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
NAMMBBDB_00564 7.4e-186 yegU O ADP-ribosylglycohydrolase
NAMMBBDB_00565 3.2e-189 yegV G pfkB family carbohydrate kinase
NAMMBBDB_00566 6.9e-270 U Permease for cytosine/purines, uracil, thiamine, allantoin
NAMMBBDB_00567 1.3e-102 Q Isochorismatase family
NAMMBBDB_00568 1.9e-121 degU K helix_turn_helix, Lux Regulon
NAMMBBDB_00569 2e-278 tcsS3 KT PspC domain
NAMMBBDB_00570 5.7e-147 pspC KT PspC domain
NAMMBBDB_00571 3.2e-93
NAMMBBDB_00572 8.8e-116 S Protein of unknown function (DUF4125)
NAMMBBDB_00573 0.0 S Domain of unknown function (DUF4037)
NAMMBBDB_00574 2.6e-214 araJ EGP Major facilitator Superfamily
NAMMBBDB_00576 0.0 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
NAMMBBDB_00577 4.5e-194 K helix_turn _helix lactose operon repressor
NAMMBBDB_00578 7.4e-250 G Psort location CytoplasmicMembrane, score 10.00
NAMMBBDB_00579 4.1e-99 S Serine aminopeptidase, S33
NAMMBBDB_00580 8.6e-207 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
NAMMBBDB_00581 3e-139 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NAMMBBDB_00582 0.0 4.2.1.53 S MCRA family
NAMMBBDB_00583 7.4e-89 phoU P Plays a role in the regulation of phosphate uptake
NAMMBBDB_00584 1.1e-215 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
NAMMBBDB_00585 6.2e-41
NAMMBBDB_00586 8.2e-218 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
NAMMBBDB_00587 1.3e-165 usp 3.5.1.28 CBM50 S CHAP domain
NAMMBBDB_00588 1.3e-79 M NlpC/P60 family
NAMMBBDB_00589 1.3e-190 T Universal stress protein family
NAMMBBDB_00590 7.7e-73 attW O OsmC-like protein
NAMMBBDB_00591 3.8e-181 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
NAMMBBDB_00592 6.4e-130 folA 1.5.1.3 H dihydrofolate reductase
NAMMBBDB_00593 3.6e-85 ptpA 3.1.3.48 T low molecular weight
NAMMBBDB_00595 9e-200 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
NAMMBBDB_00596 7.7e-171 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
NAMMBBDB_00600 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
NAMMBBDB_00601 8.8e-162
NAMMBBDB_00602 0.0 S Uncharacterised protein conserved in bacteria (DUF2194)
NAMMBBDB_00603 3.2e-283 pelF GT4 M Domain of unknown function (DUF3492)
NAMMBBDB_00604 6.2e-285 pelG S Putative exopolysaccharide Exporter (EPS-E)
NAMMBBDB_00605 2.7e-308 cotH M CotH kinase protein
NAMMBBDB_00606 6.3e-159 P VTC domain
NAMMBBDB_00607 2.2e-111 S Domain of unknown function (DUF4956)
NAMMBBDB_00608 0.0 yliE T Putative diguanylate phosphodiesterase
NAMMBBDB_00609 2e-203 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
NAMMBBDB_00610 5.5e-180 3.4.14.13 M Glycosyltransferase like family 2
NAMMBBDB_00611 1.3e-237 S AI-2E family transporter
NAMMBBDB_00612 6.3e-232 epsG M Glycosyl transferase family 21
NAMMBBDB_00613 2.8e-231 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
NAMMBBDB_00614 2.3e-201 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
NAMMBBDB_00615 3.9e-99 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
NAMMBBDB_00616 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NAMMBBDB_00617 2.1e-114 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
NAMMBBDB_00618 1.7e-154 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
NAMMBBDB_00619 2.7e-277 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
NAMMBBDB_00620 6.2e-94 S Protein of unknown function (DUF3180)
NAMMBBDB_00621 5e-165 tesB I Thioesterase-like superfamily
NAMMBBDB_00622 0.0 yjjK S ATP-binding cassette protein, ChvD family
NAMMBBDB_00623 5.9e-182 V Beta-lactamase
NAMMBBDB_00624 9.3e-74 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
NAMMBBDB_00625 9.3e-156 ribD 1.1.1.193, 3.5.4.26 H Cytidine and deoxycytidylate deaminase zinc-binding region
NAMMBBDB_00627 1.1e-77 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
NAMMBBDB_00628 1.1e-294 S Amidohydrolase family
NAMMBBDB_00629 8.3e-251 metY 2.5.1.49 H Psort location Cytoplasmic, score 9.98
NAMMBBDB_00630 6.6e-267 xylA 5.3.1.5 G Belongs to the xylose isomerase family
NAMMBBDB_00631 0.0 3.2.1.37, 3.2.1.55 GH43,GH51 G Belongs to the glycosyl hydrolase 43 family
NAMMBBDB_00632 1.8e-184 K Bacterial regulatory proteins, lacI family
NAMMBBDB_00633 2.5e-239 msmE G ABC transporter periplasmic binding protein YcjN precursor K02027
NAMMBBDB_00634 9.9e-186 MA20_14025 U Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00635 2.4e-164 MA20_14020 P Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00636 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
NAMMBBDB_00637 0.0 3.1.1.53 G Glycosyl hydrolase family 2, sugar binding domain protein
NAMMBBDB_00638 9.7e-09 CE10 I Belongs to the type-B carboxylesterase lipase family
NAMMBBDB_00639 2.1e-106 lacA 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
NAMMBBDB_00640 1.6e-288 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
NAMMBBDB_00641 3.7e-224 xylR GK ROK family
NAMMBBDB_00643 1.5e-35 rpmE J Binds the 23S rRNA
NAMMBBDB_00644 2.2e-188 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
NAMMBBDB_00645 3.2e-172 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
NAMMBBDB_00646 1.7e-218 livK E Receptor family ligand binding region
NAMMBBDB_00647 9.5e-156 U Belongs to the binding-protein-dependent transport system permease family
NAMMBBDB_00648 2.2e-194 livM U Belongs to the binding-protein-dependent transport system permease family
NAMMBBDB_00649 4.8e-151 E Branched-chain amino acid ATP-binding cassette transporter
NAMMBBDB_00650 1.9e-124 livF E ATPases associated with a variety of cellular activities
NAMMBBDB_00651 1.4e-113 ywlC 2.7.7.87 J Belongs to the SUA5 family
NAMMBBDB_00652 1.1e-193 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
NAMMBBDB_00653 2.2e-287 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
NAMMBBDB_00654 3.1e-121 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
NAMMBBDB_00655 4.5e-163 supH S Sucrose-6F-phosphate phosphohydrolase
NAMMBBDB_00656 7.9e-271 recD2 3.6.4.12 L PIF1-like helicase
NAMMBBDB_00657 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
NAMMBBDB_00658 1.1e-92 L Single-strand binding protein family
NAMMBBDB_00659 0.0 pepO 3.4.24.71 O Peptidase family M13
NAMMBBDB_00660 1.7e-150 map 3.4.11.18 E Methionine aminopeptidase
NAMMBBDB_00661 1.3e-248 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
NAMMBBDB_00662 5.4e-141 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
NAMMBBDB_00663 1.2e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
NAMMBBDB_00664 1.1e-190 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
NAMMBBDB_00665 4.4e-167 ftsE D Cell division ATP-binding protein FtsE
NAMMBBDB_00666 9.8e-161 ftsX D Part of the ABC transporter FtsEX involved in cellular division
NAMMBBDB_00667 1.3e-145 usp 3.5.1.28 CBM50 D CHAP domain protein
NAMMBBDB_00668 2e-77 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
NAMMBBDB_00669 3e-157 pknD ET ABC transporter, substrate-binding protein, family 3
NAMMBBDB_00670 5.5e-151 pknD ET ABC transporter, substrate-binding protein, family 3
NAMMBBDB_00671 7.1e-151 pknD ET ABC transporter, substrate-binding protein, family 3
NAMMBBDB_00672 2.2e-126 yecS E Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00673 4.2e-144 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
NAMMBBDB_00674 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
NAMMBBDB_00675 3.6e-145 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
NAMMBBDB_00676 5.3e-229 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
NAMMBBDB_00677 1.4e-189 K Periplasmic binding protein domain
NAMMBBDB_00678 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
NAMMBBDB_00679 0.0 abfA1 3.2.1.55 GH51 G arabinose metabolic process
NAMMBBDB_00680 2.2e-246 G Bacterial extracellular solute-binding protein
NAMMBBDB_00681 1.1e-275 G Bacterial extracellular solute-binding protein
NAMMBBDB_00682 2.6e-143 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
NAMMBBDB_00683 7e-242 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
NAMMBBDB_00684 4.6e-294 E ABC transporter, substrate-binding protein, family 5
NAMMBBDB_00685 1.1e-165 P Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00686 8.9e-138 EP Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00687 1.4e-136 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
NAMMBBDB_00688 5.8e-138 sapF E ATPases associated with a variety of cellular activities
NAMMBBDB_00689 9.9e-191 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
NAMMBBDB_00690 1e-218 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
NAMMBBDB_00691 0.0 macB_2 V ATPases associated with a variety of cellular activities
NAMMBBDB_00692 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
NAMMBBDB_00693 3.9e-92 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
NAMMBBDB_00694 2.7e-102 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
NAMMBBDB_00695 4e-270 yhdG E aromatic amino acid transport protein AroP K03293
NAMMBBDB_00696 2e-307 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NAMMBBDB_00697 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
NAMMBBDB_00698 6.2e-216 ybiR P Citrate transporter
NAMMBBDB_00700 5.2e-176 ydcZ S Putative inner membrane exporter, YdcZ
NAMMBBDB_00702 0.0 tetP J Elongation factor G, domain IV
NAMMBBDB_00706 7.7e-101 K acetyltransferase
NAMMBBDB_00707 1.1e-108 papP E Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00708 3.6e-120 E Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00709 6.5e-151 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
NAMMBBDB_00710 2.6e-142 cjaA ET Bacterial periplasmic substrate-binding proteins
NAMMBBDB_00711 1.4e-200 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NAMMBBDB_00712 2.6e-155 metQ M NLPA lipoprotein
NAMMBBDB_00713 6.5e-193 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NAMMBBDB_00714 4.9e-98 metI P Psort location CytoplasmicMembrane, score 9.99
NAMMBBDB_00715 2.2e-221 mtnE 2.6.1.83 E Aminotransferase class I and II
NAMMBBDB_00716 3.2e-75 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
NAMMBBDB_00717 2.8e-15 P Belongs to the ABC transporter superfamily
NAMMBBDB_00718 1.4e-43 XAC3035 O Glutaredoxin
NAMMBBDB_00719 3.1e-127 XK27_08050 O prohibitin homologues
NAMMBBDB_00720 2e-14 S Domain of unknown function (DUF4143)
NAMMBBDB_00721 7.4e-75
NAMMBBDB_00722 1.3e-134 V ATPases associated with a variety of cellular activities
NAMMBBDB_00723 4.1e-145 M Conserved repeat domain
NAMMBBDB_00724 9.8e-256 macB_8 V MacB-like periplasmic core domain
NAMMBBDB_00725 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
NAMMBBDB_00726 1.2e-183 adh3 C Zinc-binding dehydrogenase
NAMMBBDB_00727 1.1e-84 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
NAMMBBDB_00728 2.9e-226 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
NAMMBBDB_00729 4.4e-88 zur P Belongs to the Fur family
NAMMBBDB_00730 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
NAMMBBDB_00731 2.5e-203 psuK 2.7.1.15, 2.7.1.45, 2.7.1.83 G pfkB family carbohydrate kinase
NAMMBBDB_00732 9.1e-189 yeiI 2.7.1.15, 2.7.1.45, 2.7.1.83 G pfkB family carbohydrate kinase
NAMMBBDB_00733 3.3e-129 trpF 5.3.1.24 E N-(5'phosphoribosyl)anthranilate (PRA) isomerase
NAMMBBDB_00734 1.1e-214 1.1.1.1 C Iron-containing alcohol dehydrogenase
NAMMBBDB_00735 3.2e-183 rihB 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
NAMMBBDB_00736 1.6e-247 EGP Major facilitator Superfamily
NAMMBBDB_00737 3.7e-235 purD 6.3.4.13 F Belongs to the GARS family
NAMMBBDB_00738 3.2e-184 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
NAMMBBDB_00739 1e-284 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
NAMMBBDB_00740 6.5e-309 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
NAMMBBDB_00741 4.6e-35
NAMMBBDB_00742 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
NAMMBBDB_00743 1.2e-137 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
NAMMBBDB_00744 4.8e-227 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
NAMMBBDB_00745 6.5e-226 M Glycosyl transferase 4-like domain
NAMMBBDB_00746 1.1e-197 ltaE 4.1.2.48 E Beta-eliminating lyase
NAMMBBDB_00748 2.4e-187 yocS S SBF-like CPA transporter family (DUF4137)
NAMMBBDB_00750 1.2e-61 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
NAMMBBDB_00751 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
NAMMBBDB_00752 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
NAMMBBDB_00753 9.5e-233 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
NAMMBBDB_00754 2e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
NAMMBBDB_00755 1.8e-75 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NAMMBBDB_00756 1.1e-239 carA 6.3.5.5 F Belongs to the CarA family
NAMMBBDB_00757 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
NAMMBBDB_00758 3.7e-171 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
NAMMBBDB_00759 1.2e-106 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
NAMMBBDB_00761 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
NAMMBBDB_00762 1.4e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
NAMMBBDB_00763 4.2e-228 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
NAMMBBDB_00764 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NAMMBBDB_00765 2.7e-134 3.8.1.2 S Haloacid dehalogenase-like hydrolase
NAMMBBDB_00766 7e-178 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NAMMBBDB_00767 3.5e-123 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
NAMMBBDB_00768 4.4e-283 arc O AAA ATPase forming ring-shaped complexes
NAMMBBDB_00769 3.5e-302 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
NAMMBBDB_00770 3.3e-160 hisN 3.1.3.25 G Inositol monophosphatase family
NAMMBBDB_00771 1.4e-24 pup S Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
NAMMBBDB_00772 6.7e-281 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
NAMMBBDB_00773 9.7e-141 C FMN binding
NAMMBBDB_00774 1.8e-57
NAMMBBDB_00775 1.4e-41 hup L Belongs to the bacterial histone-like protein family
NAMMBBDB_00776 0.0 S Lysylphosphatidylglycerol synthase TM region
NAMMBBDB_00777 1.1e-278 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
NAMMBBDB_00778 1.7e-276 S PGAP1-like protein
NAMMBBDB_00779 3.2e-61
NAMMBBDB_00780 5e-182 S von Willebrand factor (vWF) type A domain
NAMMBBDB_00781 2.8e-191 S von Willebrand factor (vWF) type A domain
NAMMBBDB_00782 3.6e-91
NAMMBBDB_00783 3.6e-174 S Protein of unknown function DUF58
NAMMBBDB_00784 4e-182 moxR S ATPase family associated with various cellular activities (AAA)
NAMMBBDB_00785 4.4e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NAMMBBDB_00786 8.5e-77 S LytR cell envelope-related transcriptional attenuator
NAMMBBDB_00787 8.7e-290 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
NAMMBBDB_00789 1.3e-124
NAMMBBDB_00790 6.8e-133 KT Response regulator receiver domain protein
NAMMBBDB_00791 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
NAMMBBDB_00792 4.5e-67 cspB K 'Cold-shock' DNA-binding domain
NAMMBBDB_00793 1.2e-182 S Protein of unknown function (DUF3027)
NAMMBBDB_00794 1.8e-187 uspA T Belongs to the universal stress protein A family
NAMMBBDB_00795 0.0 clpC O ATPase family associated with various cellular activities (AAA)
NAMMBBDB_00796 1.5e-255 codA 3.5.4.1, 3.5.4.21 F Amidohydrolase family
NAMMBBDB_00797 2.3e-284 purR QT Purine catabolism regulatory protein-like family
NAMMBBDB_00798 5e-246 proP EGP Sugar (and other) transporter
NAMMBBDB_00799 4.6e-140 3.5.2.10 S Creatinine amidohydrolase
NAMMBBDB_00800 9.7e-216 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
NAMMBBDB_00801 1.3e-249 hisS 6.1.1.21 J Histidyl-tRNA synthetase
NAMMBBDB_00802 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
NAMMBBDB_00803 7.1e-281 glnP E Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00804 6.7e-139 glnQ 3.6.3.21 E ATPases associated with a variety of cellular activities
NAMMBBDB_00805 6.2e-137 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
NAMMBBDB_00806 1.4e-153 gluB ET Belongs to the bacterial solute-binding protein 3 family
NAMMBBDB_00807 1.8e-111 gluC E Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00808 1e-199 gluD E Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00809 4.3e-191 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
NAMMBBDB_00810 0.0 L DEAD DEAH box helicase
NAMMBBDB_00811 1.6e-252 rarA L Recombination factor protein RarA
NAMMBBDB_00812 4.9e-258 EGP Major facilitator Superfamily
NAMMBBDB_00813 0.0 E ABC transporter, substrate-binding protein, family 5
NAMMBBDB_00814 1e-113 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
NAMMBBDB_00815 8.6e-125 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
NAMMBBDB_00816 6.1e-241 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
NAMMBBDB_00819 3.9e-246 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
NAMMBBDB_00820 4.8e-117 safC S O-methyltransferase
NAMMBBDB_00821 5.2e-178 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
NAMMBBDB_00822 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
NAMMBBDB_00823 3.5e-255 dprA 5.99.1.2 LU DNA recombination-mediator protein A
NAMMBBDB_00824 1e-292 comM O Magnesium chelatase, subunit ChlI C-terminal
NAMMBBDB_00825 3.1e-83 yraN L Belongs to the UPF0102 family
NAMMBBDB_00826 2.1e-165 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
NAMMBBDB_00827 5.9e-252 metY 2.5.1.49 E Aminotransferase class-V
NAMMBBDB_00828 4.3e-95 XK27_01265 S ECF-type riboflavin transporter, S component
NAMMBBDB_00829 5.1e-306 3.6.3.24 P AAA domain, putative AbiEii toxin, Type IV TA system
NAMMBBDB_00830 6.9e-150 P Cobalt transport protein
NAMMBBDB_00831 8.2e-193 K helix_turn_helix ASNC type
NAMMBBDB_00832 5.1e-142 V ABC transporter, ATP-binding protein
NAMMBBDB_00833 0.0 MV MacB-like periplasmic core domain
NAMMBBDB_00834 1.9e-130 K helix_turn_helix, Lux Regulon
NAMMBBDB_00835 0.0 tcsS2 T Histidine kinase
NAMMBBDB_00836 1.9e-266 pip 3.4.11.5 S alpha/beta hydrolase fold
NAMMBBDB_00837 3e-142 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NAMMBBDB_00838 3.9e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
NAMMBBDB_00839 3.4e-17 yccF S Inner membrane component domain
NAMMBBDB_00840 5.9e-12
NAMMBBDB_00841 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
NAMMBBDB_00842 7e-85 feoB P transporter of a GTP-driven Fe(2 ) uptake system
NAMMBBDB_00843 2.7e-117
NAMMBBDB_00845 6.4e-180 MA20_14895 S Conserved hypothetical protein 698
NAMMBBDB_00846 3e-224 C Na H antiporter family protein
NAMMBBDB_00847 2.5e-172 korD 1.2.7.3 C Domain of unknown function (DUF362)
NAMMBBDB_00848 1.4e-112 2.7.1.48 F uridine kinase
NAMMBBDB_00849 1.9e-93 S ECF transporter, substrate-specific component
NAMMBBDB_00850 1.4e-137 S Sulfite exporter TauE/SafE
NAMMBBDB_00851 9.1e-141 K helix_turn_helix, arabinose operon control protein
NAMMBBDB_00852 9.8e-157 3.1.3.73 G Phosphoglycerate mutase family
NAMMBBDB_00853 9e-229 rutG F Permease family
NAMMBBDB_00854 1.4e-127 S Enoyl-(Acyl carrier protein) reductase
NAMMBBDB_00855 1.2e-270 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
NAMMBBDB_00856 1.9e-133 ybbM V Uncharacterised protein family (UPF0014)
NAMMBBDB_00857 5.4e-142 ybbL V ATPases associated with a variety of cellular activities
NAMMBBDB_00858 9.4e-240 S Putative esterase
NAMMBBDB_00859 0.0 lysX S Uncharacterised conserved protein (DUF2156)
NAMMBBDB_00860 6e-274 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
NAMMBBDB_00861 5.5e-144 S Belongs to the short-chain dehydrogenases reductases (SDR) family
NAMMBBDB_00862 3.4e-216 patB 4.4.1.8 E Aminotransferase, class I II
NAMMBBDB_00863 1.8e-303 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
NAMMBBDB_00864 3.7e-179 opcA G Glucose-6-phosphate dehydrogenase subunit
NAMMBBDB_00865 2.7e-143 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
NAMMBBDB_00866 1.2e-56 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
NAMMBBDB_00867 9.5e-86 M Protein of unknown function (DUF3737)
NAMMBBDB_00868 3.9e-142 azlC E AzlC protein
NAMMBBDB_00869 3.2e-53 azlD E Branched-chain amino acid transport protein (AzlD)
NAMMBBDB_00870 0.0 cstA T 5TM C-terminal transporter carbon starvation CstA
NAMMBBDB_00871 6.2e-40 ybdD S Selenoprotein, putative
NAMMBBDB_00872 8.3e-177 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
NAMMBBDB_00873 0.0 S Uncharacterised protein family (UPF0182)
NAMMBBDB_00874 1.2e-94 2.3.1.183 M Acetyltransferase (GNAT) domain
NAMMBBDB_00875 3.8e-113 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
NAMMBBDB_00876 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NAMMBBDB_00877 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
NAMMBBDB_00878 2.6e-71 divIC D Septum formation initiator
NAMMBBDB_00879 7.5e-103 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
NAMMBBDB_00880 1.3e-182 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
NAMMBBDB_00882 1.2e-70 P Major Facilitator Superfamily
NAMMBBDB_00884 3.9e-91
NAMMBBDB_00885 1.2e-282 sdaA 4.3.1.17 E Serine dehydratase alpha chain
NAMMBBDB_00886 1.2e-73 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
NAMMBBDB_00887 2.6e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
NAMMBBDB_00888 4.4e-142 yplQ S Haemolysin-III related
NAMMBBDB_00889 6e-277 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
NAMMBBDB_00890 1.9e-46 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
NAMMBBDB_00891 0.0 D FtsK/SpoIIIE family
NAMMBBDB_00892 3.1e-170 K Cell envelope-related transcriptional attenuator domain
NAMMBBDB_00894 5.7e-208 K Cell envelope-related transcriptional attenuator domain
NAMMBBDB_00895 3.4e-54 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
NAMMBBDB_00896 0.0 S Glycosyl transferase, family 2
NAMMBBDB_00897 3.3e-222
NAMMBBDB_00898 1.5e-71 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
NAMMBBDB_00899 9.5e-152 cof 5.2.1.8 T Eukaryotic phosphomannomutase
NAMMBBDB_00900 2.9e-139 ctsW S Phosphoribosyl transferase domain
NAMMBBDB_00901 6.8e-188 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
NAMMBBDB_00902 2e-129 T Response regulator receiver domain protein
NAMMBBDB_00903 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
NAMMBBDB_00904 3e-102 carD K CarD-like/TRCF domain
NAMMBBDB_00905 1.7e-87 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
NAMMBBDB_00906 1e-140 znuB U ABC 3 transport family
NAMMBBDB_00907 2e-160 znuC P ATPases associated with a variety of cellular activities
NAMMBBDB_00908 5.9e-173 P Zinc-uptake complex component A periplasmic
NAMMBBDB_00909 4.2e-161 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
NAMMBBDB_00910 8.3e-255 rpsA J Ribosomal protein S1
NAMMBBDB_00911 2e-115 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NAMMBBDB_00912 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
NAMMBBDB_00913 5.4e-14 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
NAMMBBDB_00914 3.3e-158 terC P Integral membrane protein, TerC family
NAMMBBDB_00915 2.5e-305 pyk 2.7.1.40 G Pyruvate kinase
NAMMBBDB_00917 1.3e-18 relB L RelB antitoxin
NAMMBBDB_00919 2.7e-195 metC 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
NAMMBBDB_00920 3.2e-115 3.6.3.21 E ATPases associated with a variety of cellular activities
NAMMBBDB_00921 1.4e-121 tcyA ET Bacterial periplasmic substrate-binding proteins
NAMMBBDB_00922 8.2e-101 E Binding-protein-dependent transport system inner membrane component
NAMMBBDB_00923 5.1e-37 pcrA1 3.6.4.12 F DNA helicase
NAMMBBDB_00924 0.0 hsdR 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
NAMMBBDB_00925 2.6e-243 hsdM 2.1.1.72 V HsdM N-terminal domain
NAMMBBDB_00926 1.6e-57 hsdS 2.1.1.72, 3.1.21.3 V Type I restriction modification DNA specificity domain
NAMMBBDB_00927 2.2e-69 hsdS 3.1.21.3 L Type I restriction modification DNA specificity domain
NAMMBBDB_00928 8.4e-107 L Belongs to the 'phage' integrase family
NAMMBBDB_00929 6.8e-164 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
NAMMBBDB_00930 9.4e-101 pdtaR T Response regulator receiver domain protein
NAMMBBDB_00931 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NAMMBBDB_00932 9.9e-174 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
NAMMBBDB_00933 1.5e-123 3.6.1.13 L NUDIX domain
NAMMBBDB_00934 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
NAMMBBDB_00935 1.4e-212 ykiI
NAMMBBDB_00937 1.4e-256 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
NAMMBBDB_00938 3.8e-70 yvbK 3.1.3.25 K Acetyltransferase (GNAT) domain
NAMMBBDB_00939 4.9e-75 yiaC K Acetyltransferase (GNAT) domain
NAMMBBDB_00940 5.1e-303 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
NAMMBBDB_00941 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
NAMMBBDB_00942 5.6e-300 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
NAMMBBDB_00943 1.7e-232 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NAMMBBDB_00944 0.0 yrhL I Psort location CytoplasmicMembrane, score 9.99
NAMMBBDB_00945 2.8e-244 pbuX F Permease family
NAMMBBDB_00946 1.5e-106 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
NAMMBBDB_00947 0.0 pcrA 3.6.4.12 L DNA helicase
NAMMBBDB_00948 1.7e-61 S Domain of unknown function (DUF4418)
NAMMBBDB_00949 1.4e-215 V FtsX-like permease family
NAMMBBDB_00950 1.9e-150 lolD V ABC transporter
NAMMBBDB_00951 3.1e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
NAMMBBDB_00952 3.4e-51 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
NAMMBBDB_00953 5.6e-129 pgm3 G Phosphoglycerate mutase family
NAMMBBDB_00954 3.4e-59 WQ51_05790 S Bacterial protein of unknown function (DUF948)
NAMMBBDB_00955 2.5e-36
NAMMBBDB_00956 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NAMMBBDB_00957 2.7e-82 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
NAMMBBDB_00958 8.9e-191 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
NAMMBBDB_00959 9.3e-57 3.4.23.43 S Type IV leader peptidase family
NAMMBBDB_00960 1.3e-221 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
NAMMBBDB_00961 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
NAMMBBDB_00962 4.9e-81 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
NAMMBBDB_00963 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 M Aamy_C
NAMMBBDB_00964 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
NAMMBBDB_00965 0.0 S L,D-transpeptidase catalytic domain
NAMMBBDB_00966 9.6e-291 sufB O FeS assembly protein SufB
NAMMBBDB_00967 1e-234 sufD O FeS assembly protein SufD
NAMMBBDB_00968 1e-142 sufC O FeS assembly ATPase SufC
NAMMBBDB_00969 9.4e-239 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NAMMBBDB_00970 2.6e-97 iscU C SUF system FeS assembly protein, NifU family
NAMMBBDB_00971 2.7e-108 yitW S Iron-sulfur cluster assembly protein
NAMMBBDB_00972 8.1e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
NAMMBBDB_00973 3.5e-163 spoU 2.1.1.185 J SpoU rRNA Methylase family
NAMMBBDB_00975 2e-138 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
NAMMBBDB_00976 1.8e-56 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
NAMMBBDB_00977 5.9e-208 phoH T PhoH-like protein
NAMMBBDB_00978 9.4e-103 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
NAMMBBDB_00979 4.1e-251 corC S CBS domain
NAMMBBDB_00980 2e-180 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
NAMMBBDB_00981 0.0 fadD 6.2.1.3 I AMP-binding enzyme
NAMMBBDB_00982 1.7e-202 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
NAMMBBDB_00983 1.6e-43 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
NAMMBBDB_00984 3.5e-258 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
NAMMBBDB_00985 1.9e-269 S Psort location Cytoplasmic, score 8.87
NAMMBBDB_00987 4.6e-225 G Transmembrane secretion effector
NAMMBBDB_00988 3.5e-120 K Bacterial regulatory proteins, tetR family
NAMMBBDB_00989 1.1e-39 nrdH O Glutaredoxin
NAMMBBDB_00990 3.3e-74 nrdI F Probably involved in ribonucleotide reductase function
NAMMBBDB_00991 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NAMMBBDB_00993 8.2e-190 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NAMMBBDB_00994 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
NAMMBBDB_00996 2.6e-30 EGP Major facilitator Superfamily
NAMMBBDB_00997 1.3e-25 yhjX EGP Major facilitator Superfamily
NAMMBBDB_00998 8.5e-195 S alpha beta
NAMMBBDB_00999 1e-89 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
NAMMBBDB_01000 1.4e-92 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NAMMBBDB_01001 1.9e-51 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NAMMBBDB_01002 9.1e-74 K Acetyltransferase (GNAT) domain
NAMMBBDB_01004 1.9e-227 ilvE 2.6.1.42 E Amino-transferase class IV
NAMMBBDB_01005 1.1e-133 S UPF0126 domain
NAMMBBDB_01006 2.9e-33 rpsT J Binds directly to 16S ribosomal RNA
NAMMBBDB_01007 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
NAMMBBDB_01008 3e-234 hemN H Involved in the biosynthesis of porphyrin-containing compound
NAMMBBDB_01009 5e-145 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
NAMMBBDB_01010 6.9e-289 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
NAMMBBDB_01011 2.1e-218 luxE 6.2.1.19 H long-chain-fatty-acid--luciferin-component ligase, acyl-protein synthase
NAMMBBDB_01012 1.1e-234 F Psort location CytoplasmicMembrane, score 10.00
NAMMBBDB_01013 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
NAMMBBDB_01014 2.6e-307 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
NAMMBBDB_01015 2e-74
NAMMBBDB_01016 7.6e-249 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
NAMMBBDB_01017 9.3e-158 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
NAMMBBDB_01018 8.8e-198 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
NAMMBBDB_01019 4.5e-100 sixA 3.6.1.55 T Phosphoglycerate mutase family
NAMMBBDB_01020 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
NAMMBBDB_01021 1.6e-157 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
NAMMBBDB_01022 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
NAMMBBDB_01023 3e-187 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
NAMMBBDB_01024 4.2e-74 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
NAMMBBDB_01025 5.2e-278 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
NAMMBBDB_01026 7e-178 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
NAMMBBDB_01027 9.3e-155 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
NAMMBBDB_01028 6.6e-179 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
NAMMBBDB_01029 5.5e-124 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NAMMBBDB_01030 2.9e-162 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
NAMMBBDB_01031 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
NAMMBBDB_01032 8.8e-109 J Acetyltransferase (GNAT) domain
NAMMBBDB_01033 2.3e-68 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NAMMBBDB_01034 2.1e-218 yxjG_1 E Psort location Cytoplasmic, score 8.87
NAMMBBDB_01035 6.1e-122 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
NAMMBBDB_01036 1.8e-50 sdpR K helix_turn_helix, Arsenical Resistance Operon Repressor
NAMMBBDB_01037 1.4e-139 S SdpI/YhfL protein family
NAMMBBDB_01038 8.6e-108 3.8.1.2 S Haloacid dehalogenase-like hydrolase
NAMMBBDB_01039 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
NAMMBBDB_01040 5e-125 XK27_06785 V ABC transporter
NAMMBBDB_01042 1.6e-61
NAMMBBDB_01043 3.3e-96 M Peptidase family M23
NAMMBBDB_01044 0.0 fadD1 6.2.1.3 I AMP-binding enzyme
NAMMBBDB_01045 1.1e-268 G ABC transporter substrate-binding protein
NAMMBBDB_01046 2e-230 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
NAMMBBDB_01047 1.4e-209 guaB 1.1.1.205 F IMP dehydrogenase family protein
NAMMBBDB_01048 3e-107 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
NAMMBBDB_01049 3.3e-63 U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
NAMMBBDB_01050 2.6e-242 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
NAMMBBDB_01051 1.4e-66 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
NAMMBBDB_01052 5.6e-143 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
NAMMBBDB_01053 4e-116
NAMMBBDB_01055 1.3e-206 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
NAMMBBDB_01056 4.5e-233 XK27_00240 K Fic/DOC family
NAMMBBDB_01057 2.7e-70 pdxH S Pfam:Pyridox_oxidase
NAMMBBDB_01058 2.7e-302 M domain protein
NAMMBBDB_01059 5.6e-83 3.4.22.70 M Sortase family
NAMMBBDB_01060 5.2e-65 3.4.22.70 M Sortase family
NAMMBBDB_01061 1.5e-163 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
NAMMBBDB_01062 5.7e-172 corA P CorA-like Mg2+ transporter protein
NAMMBBDB_01063 1.5e-142 ET Bacterial periplasmic substrate-binding proteins
NAMMBBDB_01064 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
NAMMBBDB_01065 1.3e-92 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
NAMMBBDB_01066 0.0 comE S Competence protein
NAMMBBDB_01067 7.1e-178 holA 2.7.7.7 L DNA polymerase III delta subunit
NAMMBBDB_01068 2.1e-93 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
NAMMBBDB_01069 1.3e-148 yeaZ 2.3.1.234 O Glycoprotease family
NAMMBBDB_01070 2.6e-103 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
NAMMBBDB_01071 3.1e-195 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
NAMMBBDB_01079 3.4e-16 S Helix-turn-helix domain
NAMMBBDB_01080 1.3e-15 S Transcription factor WhiB
NAMMBBDB_01081 2.7e-31 parA D VirC1 protein
NAMMBBDB_01083 1e-21
NAMMBBDB_01084 3.6e-51
NAMMBBDB_01085 2.1e-39
NAMMBBDB_01086 0.0 XK27_00515 D Cell surface antigen C-terminus
NAMMBBDB_01087 4e-20
NAMMBBDB_01088 7.2e-10
NAMMBBDB_01089 6.9e-33
NAMMBBDB_01090 5.9e-30
NAMMBBDB_01091 7.5e-142
NAMMBBDB_01092 1e-188
NAMMBBDB_01093 2.2e-200 traD S COG0433 Predicted ATPase
NAMMBBDB_01097 1.9e-22
NAMMBBDB_01098 3.3e-229 U TraM recognition site of TraD and TraG
NAMMBBDB_01099 9.4e-50 S Domain of unknown function (DUF4913)
NAMMBBDB_01100 2.8e-40
NAMMBBDB_01102 2.2e-86 2.7.11.1 S HipA-like C-terminal domain
NAMMBBDB_01103 3e-139 L PFAM Relaxase mobilization nuclease family protein
NAMMBBDB_01104 4.6e-143 S Fic/DOC family
NAMMBBDB_01105 5.6e-62 ecoRIIR 3.1.21.4 L EcoRII C terminal
NAMMBBDB_01107 2.2e-36 S Pfam:CtkA_N
NAMMBBDB_01108 2.1e-16 K Bacterial mobilisation protein (MobC)
NAMMBBDB_01111 7.4e-244 topB 5.99.1.2 L DNA topoisomerase
NAMMBBDB_01114 2e-68
NAMMBBDB_01115 2.5e-83 M G5 domain protein
NAMMBBDB_01116 3e-08
NAMMBBDB_01117 5.9e-56 ard S Antirestriction protein (ArdA)
NAMMBBDB_01120 2.7e-102 S Fic/DOC family
NAMMBBDB_01121 6e-87 K Psort location Cytoplasmic, score
NAMMBBDB_01122 2.8e-134 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
NAMMBBDB_01124 7.8e-174 xerH L Phage integrase family
NAMMBBDB_01125 1.6e-119 yoaP E YoaP-like
NAMMBBDB_01126 4.5e-185 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
NAMMBBDB_01127 5.3e-119 ykoE S ABC-type cobalt transport system, permease component
NAMMBBDB_01128 6.7e-72 K MerR family regulatory protein
NAMMBBDB_01129 4.6e-199 adhB 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
NAMMBBDB_01130 2e-143 4.1.1.44 S Carboxymuconolactone decarboxylase family
NAMMBBDB_01131 2.7e-221 yxjG_1 E Psort location Cytoplasmic, score 8.87
NAMMBBDB_01132 3.6e-76 S Psort location CytoplasmicMembrane, score
NAMMBBDB_01133 1e-182 cat P Cation efflux family
NAMMBBDB_01136 8.2e-112
NAMMBBDB_01137 3.1e-151
NAMMBBDB_01138 6.3e-145 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
NAMMBBDB_01139 6.1e-279 pepC 3.4.22.40 E Peptidase C1-like family
NAMMBBDB_01140 1.4e-157 S IMP dehydrogenase activity
NAMMBBDB_01141 1.9e-300 ybiT S ABC transporter
NAMMBBDB_01142 4.7e-111 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
NAMMBBDB_01143 2.8e-66 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
NAMMBBDB_01145 2e-13
NAMMBBDB_01146 5.8e-273 S Psort location Cytoplasmic, score 8.87
NAMMBBDB_01147 9.5e-141 S Domain of unknown function (DUF4194)
NAMMBBDB_01148 0.0 S Psort location Cytoplasmic, score 8.87
NAMMBBDB_01149 2.1e-219 S Psort location Cytoplasmic, score 8.87
NAMMBBDB_01150 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
NAMMBBDB_01151 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
NAMMBBDB_01152 6e-182 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
NAMMBBDB_01153 1.1e-170 rapZ S Displays ATPase and GTPase activities
NAMMBBDB_01154 1.3e-171 whiA K May be required for sporulation
NAMMBBDB_01155 1.9e-220 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
NAMMBBDB_01156 9.6e-149 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
NAMMBBDB_01157 2.4e-32 secG U Preprotein translocase SecG subunit
NAMMBBDB_01158 4.8e-162 S Sucrose-6F-phosphate phosphohydrolase
NAMMBBDB_01159 8e-301 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
NAMMBBDB_01160 1.2e-08 pnuC H Nicotinamide mononucleotide transporter
NAMMBBDB_01161 5.6e-112 pnuC H Nicotinamide mononucleotide transporter
NAMMBBDB_01162 2.5e-49 nadD 2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55 H ATPase kinase involved in NAD metabolism
NAMMBBDB_01163 2.2e-41 nadR H ATPase kinase involved in NAD metabolism
NAMMBBDB_01164 4.2e-203 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
NAMMBBDB_01165 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
NAMMBBDB_01166 1e-196 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
NAMMBBDB_01167 2.4e-188 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
NAMMBBDB_01168 5.1e-158 G Fructosamine kinase
NAMMBBDB_01169 6.9e-156 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
NAMMBBDB_01170 1.6e-156 S PAC2 family
NAMMBBDB_01175 9.4e-36
NAMMBBDB_01176 4.7e-76 garA T Inner membrane component of T3SS, cytoplasmic domain
NAMMBBDB_01177 9.7e-112 K helix_turn_helix, mercury resistance
NAMMBBDB_01178 4.6e-61
NAMMBBDB_01179 2e-140 pgp 3.1.3.18 S HAD-hyrolase-like
NAMMBBDB_01180 3.9e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
NAMMBBDB_01181 0.0 helY L DEAD DEAH box helicase
NAMMBBDB_01182 2.1e-54
NAMMBBDB_01183 0.0 pafB K WYL domain
NAMMBBDB_01184 1.4e-264 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
NAMMBBDB_01186 1.1e-69
NAMMBBDB_01187 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
NAMMBBDB_01188 9.1e-144 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
NAMMBBDB_01189 5.8e-161 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
NAMMBBDB_01190 8.2e-34
NAMMBBDB_01191 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
NAMMBBDB_01192 1.8e-246
NAMMBBDB_01193 2.6e-161 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
NAMMBBDB_01194 2.2e-221 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
NAMMBBDB_01195 1.8e-99 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
NAMMBBDB_01196 1.8e-50 yajC U Preprotein translocase subunit
NAMMBBDB_01197 5.6e-200 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
NAMMBBDB_01198 1e-105 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
NAMMBBDB_01199 1e-99 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
NAMMBBDB_01200 5.2e-128 yebC K transcriptional regulatory protein
NAMMBBDB_01201 3.5e-112 pgsA1 2.7.8.11, 2.7.8.5 I CDP-alcohol phosphatidyltransferase
NAMMBBDB_01202 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NAMMBBDB_01203 1.7e-140 S Bacterial protein of unknown function (DUF881)
NAMMBBDB_01204 4.2e-45 sbp S Protein of unknown function (DUF1290)
NAMMBBDB_01205 4.5e-172 S Bacterial protein of unknown function (DUF881)
NAMMBBDB_01206 1e-102 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NAMMBBDB_01207 3.9e-156 hisG 2.4.2.17 F ATP phosphoribosyltransferase
NAMMBBDB_01208 1.9e-40 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
NAMMBBDB_01209 4.2e-97 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
NAMMBBDB_01210 4.6e-180 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
NAMMBBDB_01211 1e-162 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
NAMMBBDB_01212 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
NAMMBBDB_01213 7.1e-297 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
NAMMBBDB_01214 2.9e-72 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
NAMMBBDB_01215 3e-139 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
NAMMBBDB_01216 3.2e-225 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
NAMMBBDB_01217 6.1e-177 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
NAMMBBDB_01218 5.8e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
NAMMBBDB_01219 2.6e-135 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
NAMMBBDB_01221 5e-143 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
NAMMBBDB_01222 1.9e-139 rpsB J Belongs to the universal ribosomal protein uS2 family
NAMMBBDB_01223 1.1e-83 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
NAMMBBDB_01224 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
NAMMBBDB_01225 1.8e-121
NAMMBBDB_01227 5e-190 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NAMMBBDB_01228 1.8e-141 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
NAMMBBDB_01229 3.2e-101
NAMMBBDB_01230 2.9e-243 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
NAMMBBDB_01231 6.5e-251 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
NAMMBBDB_01232 2.3e-284 thrC 4.2.3.1 E Threonine synthase N terminus
NAMMBBDB_01233 1e-232 EGP Major facilitator Superfamily
NAMMBBDB_01234 1e-107 3.1.3.27 E haloacid dehalogenase-like hydrolase
NAMMBBDB_01235 7.4e-174 G Fic/DOC family
NAMMBBDB_01236 2e-142
NAMMBBDB_01237 6.9e-164 IQ Enoyl-(Acyl carrier protein) reductase
NAMMBBDB_01238 2e-166 S Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NAMMBBDB_01239 1.4e-75 3.4.13.22 S Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NAMMBBDB_01240 1.9e-95 bcp 1.11.1.15 O Redoxin
NAMMBBDB_01241 2.7e-24 S Psort location Cytoplasmic, score 8.87
NAMMBBDB_01242 1.1e-95 S Pyridoxamine 5'-phosphate oxidase
NAMMBBDB_01243 0.0 S Histidine phosphatase superfamily (branch 2)
NAMMBBDB_01244 1.6e-44 L transposition
NAMMBBDB_01245 1.1e-23 C Acetamidase/Formamidase family
NAMMBBDB_01246 1.7e-58 K helix_turn_helix gluconate operon transcriptional repressor
NAMMBBDB_01247 2.3e-173 V ATPases associated with a variety of cellular activities
NAMMBBDB_01248 7.4e-116 S ABC-2 family transporter protein
NAMMBBDB_01249 1.3e-122 S Haloacid dehalogenase-like hydrolase
NAMMBBDB_01250 6.2e-262 recN L May be involved in recombinational repair of damaged DNA
NAMMBBDB_01251 2e-177 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
NAMMBBDB_01252 2.2e-263 trkB P Cation transport protein
NAMMBBDB_01253 3e-116 trkA P TrkA-N domain
NAMMBBDB_01254 2.9e-134 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
NAMMBBDB_01255 1.2e-191 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
NAMMBBDB_01256 1.5e-149 L Tetratricopeptide repeat
NAMMBBDB_01257 5e-251 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NAMMBBDB_01258 0.0 S Protein of unknown function (DUF975)
NAMMBBDB_01259 8.6e-137 S Putative ABC-transporter type IV
NAMMBBDB_01260 9.7e-94 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
NAMMBBDB_01261 3.7e-279 argH 4.3.2.1 E argininosuccinate lyase
NAMMBBDB_01262 4.6e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
NAMMBBDB_01263 2.3e-82 argR K Regulates arginine biosynthesis genes
NAMMBBDB_01264 4.6e-185 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NAMMBBDB_01265 2.7e-241 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
NAMMBBDB_01266 2.8e-179 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
NAMMBBDB_01267 6.7e-215 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
NAMMBBDB_01268 4.5e-205 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
NAMMBBDB_01269 4.9e-99
NAMMBBDB_01270 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
NAMMBBDB_01271 2.4e-203 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
NAMMBBDB_01272 8.1e-157 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NAMMBBDB_01273 5e-96 yvdD 3.2.2.10 S Possible lysine decarboxylase
NAMMBBDB_01274 4.5e-18
NAMMBBDB_01276 1.5e-17 L HNH endonuclease
NAMMBBDB_01277 2.2e-113 ung2 3.2.2.27 L Uracil DNA glycosylase superfamily
NAMMBBDB_01278 4e-42 V DNA modification
NAMMBBDB_01279 7.8e-282 glnA 6.3.1.2 E glutamine synthetase
NAMMBBDB_01280 6e-143 S Domain of unknown function (DUF4191)
NAMMBBDB_01281 8.4e-247 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NAMMBBDB_01282 3.6e-93 S Protein of unknown function (DUF3043)
NAMMBBDB_01283 2.5e-253 argE E Peptidase dimerisation domain
NAMMBBDB_01284 3.1e-145 cbiQ P Cobalt transport protein
NAMMBBDB_01285 2.3e-268 ykoD P ATPases associated with a variety of cellular activities
NAMMBBDB_01286 6.4e-84 ykoE S ABC-type cobalt transport system, permease component
NAMMBBDB_01287 4.1e-212 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
NAMMBBDB_01288 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
NAMMBBDB_01289 0.0 S Tetratricopeptide repeat
NAMMBBDB_01290 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
NAMMBBDB_01291 1.9e-303 2.8.2.22 S Arylsulfotransferase Ig-like domain
NAMMBBDB_01292 5.6e-144 bioM P ATPases associated with a variety of cellular activities
NAMMBBDB_01293 8.1e-221 E Aminotransferase class I and II
NAMMBBDB_01294 1.8e-139 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
NAMMBBDB_01295 2.2e-201 S Glycosyltransferase, group 2 family protein
NAMMBBDB_01296 1.8e-144 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
NAMMBBDB_01297 2.4e-47 yhbY J CRS1_YhbY
NAMMBBDB_01298 0.0 ecfA GP ABC transporter, ATP-binding protein
NAMMBBDB_01299 2.3e-108 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
NAMMBBDB_01300 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
NAMMBBDB_01301 7.4e-38 pepC 3.4.22.40 E homocysteine catabolic process
NAMMBBDB_01302 1.3e-113 kcsA U Ion channel
NAMMBBDB_01303 5.2e-184 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
NAMMBBDB_01304 3.5e-85 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
NAMMBBDB_01305 2.6e-123 3.2.1.8 S alpha beta
NAMMBBDB_01307 3.6e-40 S Protein of unknown function DUF262
NAMMBBDB_01308 0.0 S Protein of unknown function DUF262
NAMMBBDB_01309 5.2e-155
NAMMBBDB_01310 0.0 L helicase
NAMMBBDB_01311 1e-120 S Domain of unknown function (DUF4391)
NAMMBBDB_01312 1.5e-230 2.1.1.72 L DNA methylase
NAMMBBDB_01313 0.0 res 3.1.21.5 V Type III restriction enzyme, res subunit
NAMMBBDB_01315 1.8e-51
NAMMBBDB_01316 2.7e-213
NAMMBBDB_01317 2.7e-148 S phosphoesterase or phosphohydrolase
NAMMBBDB_01318 3.6e-75 4.1.1.44 S Cupin domain
NAMMBBDB_01319 1e-166 C Aldo/keto reductase family
NAMMBBDB_01320 1.4e-49 C Flavodoxin
NAMMBBDB_01321 8.7e-159 2.7.13.3 T Histidine kinase
NAMMBBDB_01322 6.5e-122 K helix_turn_helix, Lux Regulon
NAMMBBDB_01323 0.0 KLT Lanthionine synthetase C-like protein
NAMMBBDB_01324 4.2e-138 3.6.3.44 V ABC transporter
NAMMBBDB_01325 1.2e-158 msbA2 3.6.3.44 V ABC transporter transmembrane region
NAMMBBDB_01326 3.9e-159 O Thioredoxin
NAMMBBDB_01327 7.6e-129 E Psort location Cytoplasmic, score 8.87
NAMMBBDB_01328 2.7e-132 yebE S DUF218 domain
NAMMBBDB_01329 2e-231 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
NAMMBBDB_01330 2e-236 rnd 3.1.13.5 J 3'-5' exonuclease
NAMMBBDB_01331 2.9e-79 S Protein of unknown function (DUF3000)
NAMMBBDB_01332 7.4e-166 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NAMMBBDB_01333 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
NAMMBBDB_01334 9.9e-31
NAMMBBDB_01335 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
NAMMBBDB_01336 1.8e-225 S Peptidase dimerisation domain
NAMMBBDB_01337 4.8e-156 S Sucrose-6F-phosphate phosphohydrolase
NAMMBBDB_01338 4.8e-146 metQ P NLPA lipoprotein
NAMMBBDB_01339 5.5e-147 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NAMMBBDB_01340 5.4e-108 metI P Binding-protein-dependent transport system inner membrane component
NAMMBBDB_01341 1.4e-74
NAMMBBDB_01343 3.5e-126 V Abi-like protein
NAMMBBDB_01344 2.3e-30 S Psort location Cytoplasmic, score 8.87
NAMMBBDB_01345 6.8e-125 insK L Integrase core domain
NAMMBBDB_01346 9e-46 L Helix-turn-helix domain
NAMMBBDB_01347 0.0 S LPXTG-motif cell wall anchor domain protein
NAMMBBDB_01348 6e-247 dinF V MatE
NAMMBBDB_01349 1.2e-102 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NAMMBBDB_01350 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NAMMBBDB_01351 8.5e-84 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
NAMMBBDB_01352 1e-47 S Domain of unknown function (DUF4193)
NAMMBBDB_01353 4.1e-147 S Protein of unknown function (DUF3071)
NAMMBBDB_01354 3e-234 S Type I phosphodiesterase / nucleotide pyrophosphatase
NAMMBBDB_01355 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
NAMMBBDB_01356 0.0 lhr L DEAD DEAH box helicase
NAMMBBDB_01357 5.8e-32 yozG K Cro/C1-type HTH DNA-binding domain
NAMMBBDB_01358 2.4e-79 S Protein of unknown function (DUF2975)
NAMMBBDB_01359 1.6e-241 T PhoQ Sensor
NAMMBBDB_01360 1.5e-222 G Major Facilitator Superfamily
NAMMBBDB_01361 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
NAMMBBDB_01362 9.7e-173 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
NAMMBBDB_01363 4.3e-118
NAMMBBDB_01364 2.6e-197 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
NAMMBBDB_01365 0.0 pknL 2.7.11.1 KLT PASTA
NAMMBBDB_01366 7.3e-132 plsC2 2.3.1.51 I Phosphate acyltransferases
NAMMBBDB_01367 1.3e-97
NAMMBBDB_01368 6.5e-193 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
NAMMBBDB_01369 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
NAMMBBDB_01370 3.3e-118 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
NAMMBBDB_01371 1.1e-119 recX S Modulates RecA activity
NAMMBBDB_01372 2.3e-207 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
NAMMBBDB_01373 8.2e-45 S Protein of unknown function (DUF3046)
NAMMBBDB_01374 3.6e-80 K Helix-turn-helix XRE-family like proteins
NAMMBBDB_01375 5.2e-96 cinA 3.5.1.42 S Belongs to the CinA family
NAMMBBDB_01376 8.6e-122 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NAMMBBDB_01377 0.0 ftsK D FtsK SpoIIIE family protein
NAMMBBDB_01378 1.1e-192 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
NAMMBBDB_01379 1e-281 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
NAMMBBDB_01380 1.1e-155 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
NAMMBBDB_01381 6.2e-177 ydeD EG EamA-like transporter family
NAMMBBDB_01382 8.6e-116 ybhL S Belongs to the BI1 family
NAMMBBDB_01383 6.7e-60 S Domain of unknown function (DUF5067)
NAMMBBDB_01384 5.1e-243 T Histidine kinase
NAMMBBDB_01385 1.8e-127 K helix_turn_helix, Lux Regulon
NAMMBBDB_01386 0.0 S Protein of unknown function DUF262
NAMMBBDB_01387 2.6e-115 K helix_turn_helix, Lux Regulon
NAMMBBDB_01388 1.2e-244 T Histidine kinase
NAMMBBDB_01389 4.4e-191 V ATPases associated with a variety of cellular activities
NAMMBBDB_01390 5e-224 V ABC-2 family transporter protein
NAMMBBDB_01391 4e-229 V ABC-2 family transporter protein
NAMMBBDB_01392 2.2e-209 rhaR1 K helix_turn_helix, arabinose operon control protein
NAMMBBDB_01393 4.7e-109 maa 2.3.1.18, 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
NAMMBBDB_01394 9.9e-250 VP1224 V Psort location CytoplasmicMembrane, score 9.99
NAMMBBDB_01395 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
NAMMBBDB_01396 0.0 ctpE P E1-E2 ATPase
NAMMBBDB_01397 3.3e-98
NAMMBBDB_01398 2.8e-243 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NAMMBBDB_01399 2.4e-133 S Protein of unknown function (DUF3159)
NAMMBBDB_01400 3.7e-151 S Protein of unknown function (DUF3710)
NAMMBBDB_01401 1.4e-172 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
NAMMBBDB_01402 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
NAMMBBDB_01403 4.1e-170 dppC EP N-terminal TM domain of oligopeptide transport permease C
NAMMBBDB_01404 1.6e-155 dppB EP Binding-protein-dependent transport system inner membrane component
NAMMBBDB_01405 0.0 E ABC transporter, substrate-binding protein, family 5
NAMMBBDB_01406 0.0 E ABC transporter, substrate-binding protein, family 5
NAMMBBDB_01407 1.6e-171 xerC D Belongs to the 'phage' integrase family. XerC subfamily
NAMMBBDB_01408 5.2e-08
NAMMBBDB_01409 2.8e-34
NAMMBBDB_01410 8.9e-195 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
NAMMBBDB_01411 1.3e-190 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
NAMMBBDB_01412 4e-104
NAMMBBDB_01413 0.0 typA T Elongation factor G C-terminus
NAMMBBDB_01414 2.6e-250 naiP U Sugar (and other) transporter
NAMMBBDB_01415 2.1e-151 nrtR 3.6.1.55 F NUDIX hydrolase
NAMMBBDB_01416 6.8e-153 soj D CobQ CobB MinD ParA nucleotide binding domain protein
NAMMBBDB_01417 2e-177 xerD D recombinase XerD
NAMMBBDB_01418 9.6e-62 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
NAMMBBDB_01419 2.1e-25 rpmI J Ribosomal protein L35
NAMMBBDB_01420 1.6e-103 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
NAMMBBDB_01421 3.7e-110 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
NAMMBBDB_01422 1.8e-198 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
NAMMBBDB_01423 2.1e-88 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NAMMBBDB_01424 7.9e-172 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
NAMMBBDB_01425 4.3e-188 galM 5.1.3.3 G Aldose 1-epimerase
NAMMBBDB_01426 2.6e-36
NAMMBBDB_01427 1.3e-97 sigH K Belongs to the sigma-70 factor family. ECF subfamily
NAMMBBDB_01428 2.8e-277 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NAMMBBDB_01429 1.7e-187 V Acetyltransferase (GNAT) domain
NAMMBBDB_01430 4.6e-283 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
NAMMBBDB_01431 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
NAMMBBDB_01432 9e-95 3.6.1.55 F NUDIX domain
NAMMBBDB_01433 0.0 P Belongs to the ABC transporter superfamily
NAMMBBDB_01434 4.7e-192 dppC EP Binding-protein-dependent transport system inner membrane component
NAMMBBDB_01435 1.7e-188 dppB EP Binding-protein-dependent transport system inner membrane component
NAMMBBDB_01436 4.7e-307 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
NAMMBBDB_01437 1.7e-218 GK ROK family
NAMMBBDB_01438 1.1e-164 2.7.1.4 G pfkB family carbohydrate kinase
NAMMBBDB_01439 9.7e-190 S Metal-independent alpha-mannosidase (GH125)
NAMMBBDB_01440 1.6e-27
NAMMBBDB_01441 3.5e-246 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
NAMMBBDB_01442 1.7e-140 ftsQ 6.3.2.4 D Cell division protein FtsQ
NAMMBBDB_01443 2.3e-271 murC 6.3.2.8 M Belongs to the MurCDEF family
NAMMBBDB_01444 6.4e-216 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NAMMBBDB_01445 1.1e-202 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
NAMMBBDB_01446 2.1e-255 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
NAMMBBDB_01447 8.8e-193 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NAMMBBDB_01448 6.4e-263 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
NAMMBBDB_01449 1.1e-153 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NAMMBBDB_01450 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
NAMMBBDB_01451 1.8e-62 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
NAMMBBDB_01452 1.3e-190 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
NAMMBBDB_01453 7e-92 mraZ K Belongs to the MraZ family
NAMMBBDB_01454 0.0 L DNA helicase
NAMMBBDB_01455 1.1e-217 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
NAMMBBDB_01456 2.9e-84 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
NAMMBBDB_01457 1e-53 M Lysin motif
NAMMBBDB_01458 2.2e-131 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NAMMBBDB_01459 1.3e-149 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
NAMMBBDB_01460 2.3e-176 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
NAMMBBDB_01461 4.9e-271 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NAMMBBDB_01462 5.9e-114 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
NAMMBBDB_01463 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
NAMMBBDB_01464 1.9e-192
NAMMBBDB_01465 4.7e-191 V N-Acetylmuramoyl-L-alanine amidase
NAMMBBDB_01466 8.6e-80
NAMMBBDB_01467 4.2e-118 ytrE V ATPases associated with a variety of cellular activities
NAMMBBDB_01468 1.2e-42 EGP Major facilitator Superfamily
NAMMBBDB_01469 3.4e-123 int8 L Phage integrase family
NAMMBBDB_01470 3e-09
NAMMBBDB_01471 7.5e-12
NAMMBBDB_01472 4.9e-28 K Transcriptional regulator
NAMMBBDB_01473 1.5e-52
NAMMBBDB_01474 1.3e-29 S Putative phage holin Dp-1
NAMMBBDB_01475 3e-88 M Glycosyl hydrolases family 25
NAMMBBDB_01476 8.8e-21
NAMMBBDB_01479 5.3e-97 L reverse transcriptase
NAMMBBDB_01480 6.1e-179
NAMMBBDB_01481 5.2e-10 MU outer membrane autotransporter barrel domain protein
NAMMBBDB_01482 9.3e-145 L DNA integration
NAMMBBDB_01483 1.6e-25
NAMMBBDB_01486 5.6e-83
NAMMBBDB_01488 5.9e-227 S Psort location Cytoplasmic, score
NAMMBBDB_01489 7.2e-150
NAMMBBDB_01490 0.0 S Phage-related minor tail protein
NAMMBBDB_01491 2e-08
NAMMBBDB_01492 1.2e-80
NAMMBBDB_01493 1.3e-85
NAMMBBDB_01494 5.9e-65
NAMMBBDB_01495 5.4e-49
NAMMBBDB_01496 1.8e-53
NAMMBBDB_01497 7.9e-33 S Phage protein Gp19/Gp15/Gp42
NAMMBBDB_01500 1.8e-120
NAMMBBDB_01501 9.9e-20
NAMMBBDB_01502 3.7e-69
NAMMBBDB_01503 2.8e-162 S Phage portal protein, SPP1 Gp6-like
NAMMBBDB_01504 4.7e-259 S Terminase
NAMMBBDB_01505 4e-64
NAMMBBDB_01507 7.3e-98
NAMMBBDB_01508 1.3e-16
NAMMBBDB_01512 7.8e-40
NAMMBBDB_01513 4.5e-19 L HNH endonuclease
NAMMBBDB_01517 1.5e-40
NAMMBBDB_01518 3.4e-20
NAMMBBDB_01520 6.9e-13
NAMMBBDB_01521 4.7e-40
NAMMBBDB_01523 8.8e-60 ssb1 L single-stranded DNA-binding protein
NAMMBBDB_01524 3.7e-61 recT L RecT family
NAMMBBDB_01525 6.3e-86 yqaJ L YqaJ-like viral recombinase domain
NAMMBBDB_01529 5.3e-120 K BRO family, N-terminal domain
NAMMBBDB_01530 6.9e-22 T Pentapeptide repeats (8 copies)
NAMMBBDB_01531 2.2e-13
NAMMBBDB_01532 2.3e-24
NAMMBBDB_01534 2.5e-10
NAMMBBDB_01535 4.7e-08
NAMMBBDB_01536 1.1e-45
NAMMBBDB_01537 3.3e-40
NAMMBBDB_01538 6.6e-63
NAMMBBDB_01539 9.1e-170 EGP Major facilitator Superfamily
NAMMBBDB_01540 2.8e-139 M Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
NAMMBBDB_01541 5.6e-219 S Domain of unknown function (DUF5067)
NAMMBBDB_01542 3.1e-264 glnA2 6.3.1.2 E glutamine synthetase
NAMMBBDB_01543 1.4e-130 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
NAMMBBDB_01544 6.3e-122 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
NAMMBBDB_01545 4.9e-121
NAMMBBDB_01546 1.5e-109 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
NAMMBBDB_01547 2.5e-225 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
NAMMBBDB_01548 2.4e-259 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
NAMMBBDB_01549 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
NAMMBBDB_01550 4.9e-176 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
NAMMBBDB_01551 4.3e-87 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
NAMMBBDB_01552 4.5e-31 3.1.21.3 V DivIVA protein
NAMMBBDB_01553 6.9e-41 yggT S YGGT family
NAMMBBDB_01554 8.9e-81 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
NAMMBBDB_01555 5.6e-220 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
NAMMBBDB_01556 1.1e-244 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NAMMBBDB_01557 1.3e-295 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
NAMMBBDB_01558 1.5e-104 S Pilus assembly protein, PilO
NAMMBBDB_01559 5.3e-165 pilN NU PFAM Fimbrial assembly family protein
NAMMBBDB_01560 1.9e-64 pilM NU Type IV pilus assembly protein PilM;
NAMMBBDB_01561 9.3e-287 pilT NU Type II/IV secretion system protein
NAMMBBDB_01562 0.0
NAMMBBDB_01563 9.9e-155 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
NAMMBBDB_01564 2.4e-133 thiE 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
NAMMBBDB_01565 2.9e-151 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
NAMMBBDB_01566 3e-60 S Thiamine-binding protein
NAMMBBDB_01567 3.7e-193 K helix_turn _helix lactose operon repressor
NAMMBBDB_01568 2.8e-241 lacY P LacY proton/sugar symporter
NAMMBBDB_01569 0.0 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
NAMMBBDB_01570 3.2e-142 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
NAMMBBDB_01571 5.3e-206 P NMT1/THI5 like
NAMMBBDB_01572 2.1e-217 iunH1 3.2.2.1 F nucleoside hydrolase
NAMMBBDB_01573 4e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NAMMBBDB_01574 7.3e-135 recO L Involved in DNA repair and RecF pathway recombination
NAMMBBDB_01575 0.0 I acetylesterase activity
NAMMBBDB_01576 5.6e-225 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
NAMMBBDB_01577 8.5e-218 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
NAMMBBDB_01578 1.1e-236 2.7.11.1 NU Tfp pilus assembly protein FimV
NAMMBBDB_01580 6.5e-75 S Protein of unknown function (DUF3052)
NAMMBBDB_01581 1.3e-154 lon T Belongs to the peptidase S16 family
NAMMBBDB_01582 3.3e-294 S Zincin-like metallopeptidase
NAMMBBDB_01583 1.4e-281 uvrD2 3.6.4.12 L DNA helicase
NAMMBBDB_01584 6.1e-269 mphA S Aminoglycoside phosphotransferase
NAMMBBDB_01585 3.6e-32 S Protein of unknown function (DUF3107)
NAMMBBDB_01586 5e-173 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
NAMMBBDB_01587 2.1e-117 S Vitamin K epoxide reductase
NAMMBBDB_01588 7.8e-171 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
NAMMBBDB_01589 2.2e-145 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
NAMMBBDB_01590 2.1e-21 S lipid catabolic process
NAMMBBDB_01591 3e-301 E ABC transporter, substrate-binding protein, family 5
NAMMBBDB_01592 4.9e-176 iaaA 3.4.19.5, 3.5.1.1 E Asparaginase
NAMMBBDB_01593 6.5e-156 S Patatin-like phospholipase
NAMMBBDB_01594 2.5e-186 K LysR substrate binding domain protein
NAMMBBDB_01595 1.6e-240 patB 4.4.1.8 E Aminotransferase, class I II
NAMMBBDB_01596 1.1e-121 S Phospholipase/Carboxylesterase
NAMMBBDB_01597 7.8e-48 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
NAMMBBDB_01598 3.3e-197 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
NAMMBBDB_01599 4.5e-131 cas4 3.1.12.1 L Domain of unknown function DUF83
NAMMBBDB_01600 4.5e-152 csd2 L CRISPR-associated protein Cas7
NAMMBBDB_01601 0.0 csd1 3.5.1.28 M CRISPR-associated protein (Cas_Csd1)
NAMMBBDB_01602 1.5e-137 cas5d S CRISPR-associated protein (Cas_Cas5)
NAMMBBDB_01603 0.0 cas3 L DEAD-like helicases superfamily
NAMMBBDB_01604 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NAMMBBDB_01605 1e-257 lacS G Psort location CytoplasmicMembrane, score 10.00
NAMMBBDB_01606 2.6e-183 lacR K Transcriptional regulator, LacI family
NAMMBBDB_01607 0.0 V ABC transporter transmembrane region
NAMMBBDB_01608 0.0 V ABC transporter, ATP-binding protein
NAMMBBDB_01609 1.3e-96 K MarR family
NAMMBBDB_01610 0.0 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
NAMMBBDB_01611 9.6e-106 K Bacterial regulatory proteins, tetR family
NAMMBBDB_01612 1.7e-194 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
NAMMBBDB_01613 1.1e-181 G Transporter major facilitator family protein
NAMMBBDB_01614 0.0 3.2.1.40 E Bacterial alpha-L-rhamnosidase C-terminal domain
NAMMBBDB_01615 1.3e-214 EGP Major facilitator Superfamily
NAMMBBDB_01616 1.7e-116 K Periplasmic binding protein domain
NAMMBBDB_01617 5.3e-14 K helix_turn_helix, mercury resistance
NAMMBBDB_01618 6.1e-221 lmrB U Major Facilitator Superfamily
NAMMBBDB_01619 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
NAMMBBDB_01620 2.3e-108 K Bacterial regulatory proteins, tetR family
NAMMBBDB_01621 1.1e-239 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
NAMMBBDB_01622 0.0 3.2.1.37 GH43 G Glycosyl hydrolases family 43
NAMMBBDB_01623 1.9e-233 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
NAMMBBDB_01624 1.4e-128 G Transporter major facilitator family protein
NAMMBBDB_01625 1.4e-93 G Transporter major facilitator family protein
NAMMBBDB_01626 3e-105 K Bacterial regulatory proteins, tetR family
NAMMBBDB_01627 0.0 lacZ3 3.2.1.23 G Beta-galactosidase trimerisation domain
NAMMBBDB_01628 4.2e-115 K Bacterial regulatory proteins, tetR family
NAMMBBDB_01629 1.6e-254 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
NAMMBBDB_01630 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
NAMMBBDB_01631 3.9e-156 hgdC I BadF/BadG/BcrA/BcrD ATPase family
NAMMBBDB_01632 1.6e-139 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NAMMBBDB_01633 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
NAMMBBDB_01634 1.5e-244 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
NAMMBBDB_01635 7e-41 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
NAMMBBDB_01637 9.1e-198 S Endonuclease/Exonuclease/phosphatase family
NAMMBBDB_01638 2.7e-43 V ATPases associated with a variety of cellular activities
NAMMBBDB_01639 2.2e-23
NAMMBBDB_01640 2.8e-22 M cell wall anchor domain protein
NAMMBBDB_01641 2.9e-99 tmp1 S Domain of unknown function (DUF4391)
NAMMBBDB_01642 3e-168 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
NAMMBBDB_01643 1.1e-233 aspB E Aminotransferase class-V
NAMMBBDB_01644 7.4e-70 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
NAMMBBDB_01645 1.5e-186 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
NAMMBBDB_01646 0.0 helD 3.6.4.12 L Psort location Cytoplasmic, score 8.87
NAMMBBDB_01647 6.7e-198 V Domain of unknown function (DUF3427)
NAMMBBDB_01648 1.5e-76
NAMMBBDB_01649 2e-71 S Bacterial PH domain
NAMMBBDB_01650 6.7e-248 S zinc finger
NAMMBBDB_01651 3.2e-289 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
NAMMBBDB_01652 5.2e-116 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
NAMMBBDB_01653 1.5e-253 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NAMMBBDB_01654 0.0 eccCa D FtsK/SpoIIIE family
NAMMBBDB_01655 4.6e-131 T Forkhead associated domain
NAMMBBDB_01656 1e-191
NAMMBBDB_01657 4.4e-55
NAMMBBDB_01658 3.7e-188
NAMMBBDB_01659 1.9e-145
NAMMBBDB_01660 1.2e-179
NAMMBBDB_01661 3.2e-264 O Subtilase family
NAMMBBDB_01663 1.5e-43 S Proteins of 100 residues with WXG
NAMMBBDB_01664 1.1e-47 esxU S Proteins of 100 residues with WXG
NAMMBBDB_01665 5e-225 snm S WXG100 protein secretion system (Wss), protein YukD
NAMMBBDB_01666 0.0 O Type VII secretion system ESX-1, transport TM domain B
NAMMBBDB_01667 3.2e-168
NAMMBBDB_01668 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
NAMMBBDB_01669 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NAMMBBDB_01670 3.6e-174 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NAMMBBDB_01671 0.0 pacS 3.6.3.54 P E1-E2 ATPase
NAMMBBDB_01672 1.1e-38 csoR S Metal-sensitive transcriptional repressor
NAMMBBDB_01673 1.6e-132 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
NAMMBBDB_01674 1.7e-246 G Major Facilitator Superfamily
NAMMBBDB_01675 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
NAMMBBDB_01676 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
NAMMBBDB_01677 1.6e-263 KLT Protein tyrosine kinase
NAMMBBDB_01678 0.0 S Fibronectin type 3 domain
NAMMBBDB_01679 7e-227 S ATPase family associated with various cellular activities (AAA)
NAMMBBDB_01680 1.7e-218 S Protein of unknown function DUF58
NAMMBBDB_01681 0.0 E Transglutaminase-like superfamily
NAMMBBDB_01682 1.5e-163 3.1.3.16 T Sigma factor PP2C-like phosphatases
NAMMBBDB_01683 1.8e-103 B Belongs to the OprB family
NAMMBBDB_01684 1.1e-101 T Forkhead associated domain
NAMMBBDB_01685 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NAMMBBDB_01686 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NAMMBBDB_01687 6.8e-100
NAMMBBDB_01688 3.5e-182 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
NAMMBBDB_01689 3.3e-126 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
NAMMBBDB_01690 7.2e-253 S UPF0210 protein
NAMMBBDB_01691 7.1e-43 gcvR T Belongs to the UPF0237 family
NAMMBBDB_01692 1.1e-23 lmrB EGP Major facilitator Superfamily
NAMMBBDB_01693 9e-234 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
NAMMBBDB_01694 4e-250 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
NAMMBBDB_01695 3.4e-141 glpR K DeoR C terminal sensor domain
NAMMBBDB_01696 5.7e-227 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
NAMMBBDB_01697 8.8e-220 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
NAMMBBDB_01698 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
NAMMBBDB_01699 5.2e-133 glxR K helix_turn_helix, cAMP Regulatory protein
NAMMBBDB_01700 4.2e-214 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
NAMMBBDB_01701 2.9e-86 J TM2 domain
NAMMBBDB_01702 8.4e-193 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
NAMMBBDB_01703 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
NAMMBBDB_01704 1.5e-236 S Uncharacterized conserved protein (DUF2183)
NAMMBBDB_01705 7.8e-70 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
NAMMBBDB_01706 1.9e-208 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
NAMMBBDB_01707 3.4e-160 mhpC I Alpha/beta hydrolase family
NAMMBBDB_01708 3.5e-114 F Domain of unknown function (DUF4916)
NAMMBBDB_01709 1e-60 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
NAMMBBDB_01710 1.7e-166 S G5
NAMMBBDB_01711 9.2e-89
NAMMBBDB_01713 7.1e-263 rfbP M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
NAMMBBDB_01714 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
NAMMBBDB_01715 6.5e-148 P Binding-protein-dependent transport system inner membrane component
NAMMBBDB_01716 1.7e-162 P Binding-protein-dependent transport system inner membrane component
NAMMBBDB_01717 8.6e-270 G Bacterial extracellular solute-binding protein
NAMMBBDB_01718 5.9e-183 K Psort location Cytoplasmic, score
NAMMBBDB_01719 9.8e-56 yccF S Inner membrane component domain
NAMMBBDB_01720 1.6e-44 S Domain of unknown function (DUF4143)
NAMMBBDB_01721 9.3e-39 pin L Resolvase, N terminal domain
NAMMBBDB_01722 9.2e-66 L Integrase core domain
NAMMBBDB_01723 3.6e-37 L Psort location Cytoplasmic, score 8.87
NAMMBBDB_01724 4.2e-88
NAMMBBDB_01725 9.8e-66
NAMMBBDB_01726 1.2e-31 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
NAMMBBDB_01727 2.7e-33 L Transposase
NAMMBBDB_01728 2.1e-63 L PFAM Integrase catalytic
NAMMBBDB_01729 1.9e-84 S enterobacterial common antigen metabolic process
NAMMBBDB_01730 3.1e-134 G Acyltransferase family
NAMMBBDB_01731 8.2e-219 rfbX S polysaccharide biosynthetic process
NAMMBBDB_01732 8.8e-187 1.13.11.79 C Psort location Cytoplasmic, score 8.87
NAMMBBDB_01733 6.1e-210 S Polysaccharide pyruvyl transferase
NAMMBBDB_01734 6.1e-85 S Glycosyltransferase like family 2
NAMMBBDB_01735 4.3e-72 S Glycosyltransferase like family 2
NAMMBBDB_01736 1.8e-59
NAMMBBDB_01737 3.1e-131 cps1D M Domain of unknown function (DUF4422)
NAMMBBDB_01738 2.2e-175 GT4 M Psort location Cytoplasmic, score 8.87
NAMMBBDB_01739 3.2e-49 M Glycosyltransferase, group 1 family protein
NAMMBBDB_01740 1.5e-61 S Glycosyltransferase, group 2 family protein
NAMMBBDB_01741 5.6e-164 MA20_43635 M Capsular polysaccharide synthesis protein
NAMMBBDB_01742 1.6e-177 M Glycosyl transferase, family 2
NAMMBBDB_01743 2.8e-79 wcaB 2.3.1.30 E serine acetyltransferase
NAMMBBDB_01745 1.7e-162 H Core-2/I-Branching enzyme
NAMMBBDB_01746 2e-261 S Psort location CytoplasmicMembrane, score 9.99
NAMMBBDB_01747 5.9e-50 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
NAMMBBDB_01749 5e-107
NAMMBBDB_01751 2.1e-14
NAMMBBDB_01752 5.4e-190 wcoI DM Psort location CytoplasmicMembrane, score
NAMMBBDB_01753 9.3e-224 pflA S Protein of unknown function (DUF4012)
NAMMBBDB_01754 2e-85 3.1.3.48 T Low molecular weight phosphatase family
NAMMBBDB_01755 2.2e-153 S Endonuclease/Exonuclease/phosphatase family
NAMMBBDB_01756 3.4e-44
NAMMBBDB_01757 4.7e-285 EGP Major facilitator Superfamily
NAMMBBDB_01758 7.8e-241 T Diguanylate cyclase (GGDEF) domain protein
NAMMBBDB_01759 6e-116 L Protein of unknown function (DUF1524)
NAMMBBDB_01760 4.6e-165 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
NAMMBBDB_01761 2.1e-241 mntH P H( )-stimulated, divalent metal cation uptake system
NAMMBBDB_01762 4.4e-197 K helix_turn _helix lactose operon repressor
NAMMBBDB_01763 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
NAMMBBDB_01764 9.1e-240 G Bacterial extracellular solute-binding protein
NAMMBBDB_01765 2.6e-127 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
NAMMBBDB_01766 4e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
NAMMBBDB_01767 0.0 cydD V ABC transporter transmembrane region
NAMMBBDB_01768 0.0 fadD 6.2.1.3 I AMP-binding enzyme
NAMMBBDB_01769 6.3e-298 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
NAMMBBDB_01770 1e-130 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
NAMMBBDB_01771 0.0 araB 2.7.1.16, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
NAMMBBDB_01772 8.9e-209 K helix_turn _helix lactose operon repressor
NAMMBBDB_01773 1e-284 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
NAMMBBDB_01774 1.2e-188 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
NAMMBBDB_01775 1.6e-241 hom 1.1.1.3 E Homoserine dehydrogenase
NAMMBBDB_01776 9.1e-300 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
NAMMBBDB_01777 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
NAMMBBDB_01778 2.2e-271 mmuP E amino acid
NAMMBBDB_01779 2.7e-59 psp1 3.5.99.10 J Endoribonuclease L-PSP
NAMMBBDB_01781 1.8e-121 cyaA 4.6.1.1 S CYTH
NAMMBBDB_01782 9.3e-170 trxA2 O Tetratricopeptide repeat
NAMMBBDB_01783 3.3e-178
NAMMBBDB_01784 4.8e-195
NAMMBBDB_01785 6.8e-149 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
NAMMBBDB_01786 2.3e-122 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
NAMMBBDB_01787 2.3e-44 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
NAMMBBDB_01788 5.6e-283 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
NAMMBBDB_01789 1.6e-163 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
NAMMBBDB_01790 3.8e-309 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
NAMMBBDB_01791 4.5e-149 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NAMMBBDB_01792 4.4e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
NAMMBBDB_01793 8.9e-31 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NAMMBBDB_01794 2e-146 atpB C it plays a direct role in the translocation of protons across the membrane
NAMMBBDB_01795 5.4e-208 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
NAMMBBDB_01797 5e-273 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
NAMMBBDB_01798 5.7e-192 yfdV S Membrane transport protein
NAMMBBDB_01799 0.0 oxc 4.1.1.8 EH Thiamine pyrophosphate enzyme, central domain
NAMMBBDB_01800 7.1e-175 M LPXTG-motif cell wall anchor domain protein
NAMMBBDB_01801 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
NAMMBBDB_01802 3.4e-91 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
NAMMBBDB_01803 9.4e-98 mntP P Probably functions as a manganese efflux pump
NAMMBBDB_01804 4.9e-134
NAMMBBDB_01805 4.9e-134 KT Transcriptional regulatory protein, C terminal
NAMMBBDB_01806 3.2e-123 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NAMMBBDB_01807 1.9e-289 E Bacterial extracellular solute-binding proteins, family 5 Middle
NAMMBBDB_01808 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
NAMMBBDB_01809 0.0 S domain protein
NAMMBBDB_01810 1e-69 tyrA 5.4.99.5 E Chorismate mutase type II
NAMMBBDB_01811 3.7e-79 K helix_turn_helix ASNC type
NAMMBBDB_01812 9.3e-247 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
NAMMBBDB_01813 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
NAMMBBDB_01814 2.1e-51 S Protein of unknown function (DUF2469)
NAMMBBDB_01815 2e-205 2.3.1.57 J Acetyltransferase (GNAT) domain
NAMMBBDB_01816 6.6e-284 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NAMMBBDB_01817 3.3e-286 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
NAMMBBDB_01818 1.3e-46 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NAMMBBDB_01819 6.2e-134 K Psort location Cytoplasmic, score
NAMMBBDB_01820 3.1e-133 spoU 2.1.1.185 J RNA methyltransferase TrmH family
NAMMBBDB_01821 2.7e-104 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NAMMBBDB_01822 6.3e-169 rmuC S RmuC family
NAMMBBDB_01823 1.8e-135 3.6.3.3, 3.6.3.5, 3.6.3.54 P Heavy metal translocating P-type atpase
NAMMBBDB_01824 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
NAMMBBDB_01825 3.2e-172 fahA Q Fumarylacetoacetate (FAA) hydrolase family
NAMMBBDB_01826 6.5e-148 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
NAMMBBDB_01827 2.5e-80
NAMMBBDB_01828 2.5e-211 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
NAMMBBDB_01829 4.2e-09 M Protein of unknown function (DUF3152)
NAMMBBDB_01830 9.2e-130 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
NAMMBBDB_01831 3.4e-19 S zinc-ribbon domain
NAMMBBDB_01834 5.7e-167 T Pfam Adenylate and Guanylate cyclase catalytic domain
NAMMBBDB_01835 1.4e-291 D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
NAMMBBDB_01836 1.7e-70 rplI J Binds to the 23S rRNA
NAMMBBDB_01837 3.5e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
NAMMBBDB_01838 3.8e-66 ssb1 L Single-stranded DNA-binding protein
NAMMBBDB_01839 2.5e-46 rpsF J Binds together with S18 to 16S ribosomal RNA
NAMMBBDB_01840 3.3e-186 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NAMMBBDB_01841 5.7e-175 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NAMMBBDB_01842 1.1e-259 EGP Major Facilitator Superfamily
NAMMBBDB_01843 2.8e-166 iunH2 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
NAMMBBDB_01844 3.3e-197 K helix_turn _helix lactose operon repressor
NAMMBBDB_01845 1.2e-61
NAMMBBDB_01846 1.4e-203 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
NAMMBBDB_01847 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
NAMMBBDB_01848 1.4e-110 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
NAMMBBDB_01849 2.6e-155 G Binding-protein-dependent transport system inner membrane component
NAMMBBDB_01850 6.6e-157 G Binding-protein-dependent transport system inner membrane component
NAMMBBDB_01851 1.5e-244 msmE7 G Bacterial extracellular solute-binding protein
NAMMBBDB_01852 1.5e-230 nagC GK ROK family
NAMMBBDB_01853 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
NAMMBBDB_01854 1.4e-77 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
NAMMBBDB_01855 0.0 yjcE P Sodium/hydrogen exchanger family
NAMMBBDB_01856 1.3e-153 ypfH S Phospholipase/Carboxylesterase
NAMMBBDB_01857 4e-112 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
NAMMBBDB_01858 1.3e-47 L PFAM Integrase catalytic
NAMMBBDB_01859 2.3e-37 yxeN P amino acid ABC transporter
NAMMBBDB_01860 4.3e-36 E Binding-protein-dependent transport system inner membrane component
NAMMBBDB_01861 6.2e-73 3.6.3.21 E ABC transporter
NAMMBBDB_01862 3e-68 odh 1.5.1.28 I glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
NAMMBBDB_01863 2.3e-18 ET Bacterial periplasmic substrate-binding proteins
NAMMBBDB_01865 5.6e-238 bglA 3.2.1.21 G Glycosyl hydrolase family 1
NAMMBBDB_01866 8.7e-159 U Binding-protein-dependent transport system inner membrane component
NAMMBBDB_01867 1e-162 U Binding-protein-dependent transport system inner membrane component
NAMMBBDB_01868 5.6e-239 malE G Bacterial extracellular solute-binding protein
NAMMBBDB_01869 1.8e-201 rbsR K helix_turn _helix lactose operon repressor
NAMMBBDB_01870 1.2e-22 parA D VirC1 protein
NAMMBBDB_01872 8.5e-81 3.2.2.27 NU Tfp pilus assembly protein FimV
NAMMBBDB_01875 2.2e-152 S COG0433 Predicted ATPase
NAMMBBDB_01877 2.2e-11
NAMMBBDB_01878 3.2e-07 D protein tyrosine kinase activity
NAMMBBDB_01882 3.7e-30 O ATPase family associated with various cellular activities (AAA)
NAMMBBDB_01890 1.1e-56
NAMMBBDB_01891 1e-07 S Psort location Cytoplasmic, score 8.87
NAMMBBDB_01892 1.8e-118 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
NAMMBBDB_01893 3.8e-140 floL S Flotillin
NAMMBBDB_01894 6.8e-99 M domain protein
NAMMBBDB_01895 3.9e-82 3.4.22.70 M Sortase family
NAMMBBDB_01896 2.6e-306 spaI DZ Regulator of chromosome condensation (RCC1) repeat
NAMMBBDB_01897 1.1e-23 KLT serine threonine protein kinase
NAMMBBDB_01906 5.3e-129 L Psort location Cytoplasmic, score 8.87
NAMMBBDB_01915 4.8e-07 6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.5.5 HJ ligase activity
NAMMBBDB_01917 3.3e-23 S HicB_like antitoxin of bacterial toxin-antitoxin system
NAMMBBDB_01918 2e-89 L Transposase, IS605 OrfB family
NAMMBBDB_01921 8.3e-57 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
NAMMBBDB_01924 1.3e-13
NAMMBBDB_01928 3.9e-18 yorS 3.1.3.5 S 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
NAMMBBDB_01930 2.5e-11
NAMMBBDB_01932 1.9e-83
NAMMBBDB_01936 1.6e-11
NAMMBBDB_01942 3.3e-185 S AAA-like domain
NAMMBBDB_01944 5.7e-75 flgJ S pathogenesis
NAMMBBDB_01947 3.6e-152 D ftsk spoiiie
NAMMBBDB_01949 1.3e-93 D ftsk spoiiie
NAMMBBDB_01950 1.4e-10
NAMMBBDB_01951 4.7e-10
NAMMBBDB_01952 1.2e-26 K Transcriptional regulator
NAMMBBDB_01953 8.9e-27
NAMMBBDB_01955 3e-16
NAMMBBDB_01956 1.5e-36 L PDDEXK-like domain of unknown function (DUF3799)
NAMMBBDB_01957 3.1e-18 S Plasmid encoded RepA protein
NAMMBBDB_01960 1.7e-49
NAMMBBDB_01963 2.4e-94
NAMMBBDB_01964 1.5e-251 U Spy0128-like isopeptide containing domain
NAMMBBDB_01979 2.6e-14
NAMMBBDB_01987 3.8e-14 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
NAMMBBDB_01989 3.8e-37
NAMMBBDB_01991 3.8e-13 secG U Preprotein translocase SecG subunit
NAMMBBDB_01994 6.2e-103 S Plasmid encoded RepA protein
NAMMBBDB_01995 1.2e-10 K Addiction module
NAMMBBDB_02006 1.9e-26 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
NAMMBBDB_02007 1.8e-82 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
NAMMBBDB_02008 7.6e-272 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
NAMMBBDB_02012 3.6e-16 D nuclear chromosome segregation
NAMMBBDB_02013 1.2e-46 yopT S Fic/DOC family
NAMMBBDB_02014 1.2e-14 S Domain of unknown function (DUF3846)
NAMMBBDB_02015 8.9e-14 S phosphoesterase or phosphohydrolase
NAMMBBDB_02016 6.1e-92 3.1.4.37 T RNA ligase
NAMMBBDB_02028 1.5e-40 bglIM 2.1.1.113, 2.1.1.72 L DNA methylase
NAMMBBDB_02029 4.1e-25 bglIM 2.1.1.113, 2.1.1.72 L DNA methylase
NAMMBBDB_02036 4.9e-48 M Sortase family
NAMMBBDB_02037 1.1e-20 S Plasmid encoded RepA protein
NAMMBBDB_02038 3.5e-30 L Excalibur calcium-binding domain
NAMMBBDB_02040 2.7e-61 S Domain of unknown function (DUF4234)
NAMMBBDB_02041 1.5e-22 3.2.1.41 CBM48,GH13 N domain, Protein
NAMMBBDB_02042 3.1e-58 3.4.22.70 M Sortase family
NAMMBBDB_02043 6e-27 M domain protein
NAMMBBDB_02044 7.4e-16
NAMMBBDB_02045 9.6e-53 M NlpC/P60 family
NAMMBBDB_02048 5.2e-42
NAMMBBDB_02049 4e-56 usp 3.5.1.28 CBM50 S CHAP domain
NAMMBBDB_02052 8e-17 ssb1 L Single-stranded DNA-binding protein
NAMMBBDB_02053 3.5e-15
NAMMBBDB_02054 2.2e-10
NAMMBBDB_02056 9.6e-10 S Predicted nucleotidyltransferase
NAMMBBDB_02057 9.5e-108 DMZ Cadherin-like beta sandwich domain
NAMMBBDB_02058 7.6e-10 lptA 3.1.1.53 M cell wall organization
NAMMBBDB_02059 0.0 K RNA polymerase II activating transcription factor binding
NAMMBBDB_02061 7.6e-24
NAMMBBDB_02063 1.4e-53
NAMMBBDB_02064 7.4e-81 draG O ADP-ribosylglycohydrolase
NAMMBBDB_02067 1.5e-09
NAMMBBDB_02069 1.3e-10
NAMMBBDB_02070 1.4e-23
NAMMBBDB_02073 4.2e-82 S helicase activity
NAMMBBDB_02079 3.9e-49 L endonuclease I
NAMMBBDB_02081 1.7e-46
NAMMBBDB_02082 1.2e-19 repA 2.7.11.1 S Plasmid encoded RepA protein
NAMMBBDB_02084 0.0 glfT 2.4.1.288 GT2 S Glycosyltransferase like family 2
NAMMBBDB_02085 3.8e-101 3.2.1.97 GH101 M Cell wall-binding repeat protein
NAMMBBDB_02086 7.4e-207 S Predicted membrane protein (DUF2142)
NAMMBBDB_02087 1.5e-258 3.2.1.97 GH101 S Psort location Extracellular, score
NAMMBBDB_02088 3.5e-238 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
NAMMBBDB_02089 1.6e-146 rgpC U Transport permease protein
NAMMBBDB_02090 3.4e-181 GM GDP-mannose 4,6 dehydratase
NAMMBBDB_02091 7.9e-137 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
NAMMBBDB_02092 3.7e-210 M LicD family
NAMMBBDB_02093 0.0 2.4.1.288 GT2 S Glycosyltransferase like family 2
NAMMBBDB_02094 5.5e-200 cps3I G Psort location CytoplasmicMembrane, score 9.99
NAMMBBDB_02095 2e-196 3.1.1.5, 3.2.1.97 GH101 E GDSL-like Lipase/Acylhydrolase family
NAMMBBDB_02096 1.1e-300
NAMMBBDB_02097 9.5e-121 ykoT 2.4.1.83 GT2 M Glycosyl transferase family 2
NAMMBBDB_02098 2.9e-26 ykoT 2.4.1.83 GT2 M Glycosyl transferase family 2
NAMMBBDB_02099 1.9e-15 3.2.1.97 GH101 S CHAP domain
NAMMBBDB_02100 3.7e-263 lytC 3.2.1.17, 3.2.1.96, 3.2.1.97 GH101 M Glycosyl hydrolases family 25
NAMMBBDB_02101 2.2e-257 S AAA domain
NAMMBBDB_02102 2.6e-68
NAMMBBDB_02103 1e-10
NAMMBBDB_02104 3.2e-298 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
NAMMBBDB_02105 2.8e-58
NAMMBBDB_02107 5.7e-25 S Ribonuclease toxin, BrnT, of type II toxin-antitoxin system
NAMMBBDB_02108 6.1e-16 S BrnA antitoxin of type II toxin-antitoxin system
NAMMBBDB_02109 5.2e-43 K Cro/C1-type HTH DNA-binding domain
NAMMBBDB_02110 7.1e-16
NAMMBBDB_02111 1.1e-150 ltrBE1 U Relaxase/Mobilisation nuclease domain
NAMMBBDB_02112 3.3e-28 S Bacterial mobilisation protein (MobC)
NAMMBBDB_02114 0.0 V Type II restriction enzyme, methylase subunits
NAMMBBDB_02119 2.1e-101
NAMMBBDB_02120 1.9e-10
NAMMBBDB_02121 5.9e-120 L Phage integrase, N-terminal SAM-like domain
NAMMBBDB_02123 4.8e-189 EGP Major facilitator Superfamily

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)