ORF_ID e_value Gene_name EC_number CAZy COGs Description
PDEIFNDL_00001 0.0 3.2.1.21 GH3 G Fibronectin type III-like domain
PDEIFNDL_00002 0.0 KLT Protein tyrosine kinase
PDEIFNDL_00003 7.5e-151 O Thioredoxin
PDEIFNDL_00005 1.6e-197 S G5
PDEIFNDL_00006 2e-166 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PDEIFNDL_00007 9.6e-169 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PDEIFNDL_00008 2.6e-109 S LytR cell envelope-related transcriptional attenuator
PDEIFNDL_00009 1.7e-284 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
PDEIFNDL_00010 1.8e-121 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
PDEIFNDL_00011 0.0 M Conserved repeat domain
PDEIFNDL_00012 3.9e-304 murJ KLT MviN-like protein
PDEIFNDL_00013 0.0 murJ KLT MviN-like protein
PDEIFNDL_00014 4e-13 S Domain of unknown function (DUF4143)
PDEIFNDL_00015 1.4e-121 yorS 3.1.3.5 S 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
PDEIFNDL_00016 7e-14 S Psort location Extracellular, score 8.82
PDEIFNDL_00017 5.3e-181 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PDEIFNDL_00018 6.2e-204 parB K Belongs to the ParB family
PDEIFNDL_00019 1.7e-171 parA D CobQ CobB MinD ParA nucleotide binding domain protein
PDEIFNDL_00020 1.7e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PDEIFNDL_00021 8e-91 jag S Putative single-stranded nucleic acids-binding domain
PDEIFNDL_00022 3.9e-190 yidC U Membrane protein insertase, YidC Oxa1 family
PDEIFNDL_00023 5.9e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PDEIFNDL_00024 2.9e-306 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PDEIFNDL_00025 4.3e-203 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PDEIFNDL_00026 1.3e-235 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PDEIFNDL_00027 6.2e-90 S Protein of unknown function (DUF721)
PDEIFNDL_00028 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDEIFNDL_00029 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDEIFNDL_00030 3.3e-68 S Transmembrane domain of unknown function (DUF3566)
PDEIFNDL_00031 4.6e-260 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
PDEIFNDL_00032 6.5e-58 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PDEIFNDL_00036 3.1e-101 S Protein of unknown function DUF45
PDEIFNDL_00037 4.5e-188 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PDEIFNDL_00038 2.8e-241 ytfL P Transporter associated domain
PDEIFNDL_00039 5.3e-119 cah 4.2.1.1 P Reversible hydration of carbon dioxide
PDEIFNDL_00040 1.1e-38
PDEIFNDL_00041 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PDEIFNDL_00042 0.0 yjjP S Threonine/Serine exporter, ThrE
PDEIFNDL_00043 9.4e-300 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PDEIFNDL_00044 5.9e-205 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDEIFNDL_00045 1.4e-41 S Protein of unknown function (DUF3073)
PDEIFNDL_00046 1.7e-63 I Sterol carrier protein
PDEIFNDL_00047 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PDEIFNDL_00048 3.4e-35
PDEIFNDL_00049 8.5e-129 gluP 3.4.21.105 S Rhomboid family
PDEIFNDL_00050 1.1e-240 L ribosomal rna small subunit methyltransferase
PDEIFNDL_00051 3.1e-57 crgA D Involved in cell division
PDEIFNDL_00052 6.8e-142 S Bacterial protein of unknown function (DUF881)
PDEIFNDL_00053 8.7e-209 srtA 3.4.22.70 M Sortase family
PDEIFNDL_00054 1.1e-115 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
PDEIFNDL_00055 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
PDEIFNDL_00056 7.6e-177 T Protein tyrosine kinase
PDEIFNDL_00057 2.7e-266 pbpA M penicillin-binding protein
PDEIFNDL_00058 8.5e-271 rodA D Belongs to the SEDS family
PDEIFNDL_00059 6.8e-242 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
PDEIFNDL_00060 5.2e-71 fhaB T Inner membrane component of T3SS, cytoplasmic domain
PDEIFNDL_00061 1.2e-131 fhaA T Protein of unknown function (DUF2662)
PDEIFNDL_00062 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
PDEIFNDL_00063 3.5e-225 2.7.13.3 T Histidine kinase
PDEIFNDL_00064 3.2e-113 K helix_turn_helix, Lux Regulon
PDEIFNDL_00065 2.3e-193 pldB 3.1.1.5 I Serine aminopeptidase, S33
PDEIFNDL_00066 8.8e-160 yicL EG EamA-like transporter family
PDEIFNDL_00067 5.4e-86 XK27_10430 S NAD(P)H-binding
PDEIFNDL_00068 7.9e-44 ydeP K HxlR-like helix-turn-helix
PDEIFNDL_00072 2.4e-22 2.7.13.3 T Histidine kinase
PDEIFNDL_00073 1.2e-36 K helix_turn_helix, Lux Regulon
PDEIFNDL_00074 9.4e-269 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PDEIFNDL_00075 1.1e-289 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
PDEIFNDL_00076 0.0 cadA P E1-E2 ATPase
PDEIFNDL_00077 3e-187 ansA 3.5.1.1 EJ Asparaginase
PDEIFNDL_00078 3.1e-270 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
PDEIFNDL_00079 9.4e-163 htpX O Belongs to the peptidase M48B family
PDEIFNDL_00081 1.2e-48
PDEIFNDL_00082 2.2e-28
PDEIFNDL_00083 6.7e-295 hsdM 2.1.1.72 V modification (methylase) protein of type I restriction-modification system K03427
PDEIFNDL_00084 2.6e-07 S Protein of unknown function (DUF4238)
PDEIFNDL_00085 7.8e-134 3.1.21.3 V Type I restriction modification DNA specificity domain
PDEIFNDL_00086 2.8e-171 V Abi-like protein
PDEIFNDL_00087 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
PDEIFNDL_00088 3.1e-28 S Bacterial mobilisation protein (MobC)
PDEIFNDL_00089 4.5e-86 ltrBE1 U Relaxase/Mobilisation nuclease domain
PDEIFNDL_00091 2.2e-187 K Helix-turn-helix XRE-family like proteins
PDEIFNDL_00092 7e-170 yddG EG EamA-like transporter family
PDEIFNDL_00093 0.0 pip S YhgE Pip domain protein
PDEIFNDL_00094 0.0 pip S YhgE Pip domain protein
PDEIFNDL_00095 3.2e-217 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
PDEIFNDL_00096 6e-249 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PDEIFNDL_00097 2.7e-296 clcA P Voltage gated chloride channel
PDEIFNDL_00098 7.3e-123 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDEIFNDL_00099 3.3e-57 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDEIFNDL_00100 7e-29 E Receptor family ligand binding region
PDEIFNDL_00101 4.2e-195 K helix_turn _helix lactose operon repressor
PDEIFNDL_00102 1.5e-296 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
PDEIFNDL_00103 2.6e-115 S Protein of unknown function, DUF624
PDEIFNDL_00104 0.0 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
PDEIFNDL_00105 4.6e-225 G Bacterial extracellular solute-binding protein
PDEIFNDL_00106 2.2e-162 amyD3 P Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00107 1.6e-149 amyC5 P Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00108 5.8e-278 scrT G Transporter major facilitator family protein
PDEIFNDL_00109 7.9e-252 yhjE EGP Sugar (and other) transporter
PDEIFNDL_00110 1.8e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PDEIFNDL_00111 4e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PDEIFNDL_00112 0.0 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
PDEIFNDL_00113 2e-40 G beta-mannosidase
PDEIFNDL_00114 2.5e-189 K helix_turn _helix lactose operon repressor
PDEIFNDL_00115 8.3e-12 S Protein of unknown function, DUF624
PDEIFNDL_00116 4.1e-270 aroP E aromatic amino acid transport protein AroP K03293
PDEIFNDL_00117 0.0 V FtsX-like permease family
PDEIFNDL_00118 3.3e-227 P Sodium/hydrogen exchanger family
PDEIFNDL_00119 1.3e-76 S Psort location Cytoplasmic, score 8.87
PDEIFNDL_00120 2.3e-177 3.4.22.70 M Sortase family
PDEIFNDL_00121 9.3e-122 Q von Willebrand factor (vWF) type A domain
PDEIFNDL_00122 7.4e-222 M LPXTG cell wall anchor motif
PDEIFNDL_00123 2.8e-80 S Psort location Cytoplasmic, score 8.87
PDEIFNDL_00124 2.3e-279 cycA E Amino acid permease
PDEIFNDL_00125 1.2e-166 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PDEIFNDL_00126 3.8e-128 thiF 2.7.7.73, 2.7.7.80 H ThiF family
PDEIFNDL_00127 2.9e-26 thiS 2.8.1.10 H ThiS family
PDEIFNDL_00128 1.3e-155 1.1.1.65 C Aldo/keto reductase family
PDEIFNDL_00129 1.9e-57 ydgJ K helix_turn_helix multiple antibiotic resistance protein
PDEIFNDL_00130 2.1e-285 lmrA1 V ABC transporter, ATP-binding protein
PDEIFNDL_00131 0.0 lmrA2 V ABC transporter transmembrane region
PDEIFNDL_00132 1.1e-117 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDEIFNDL_00133 2e-237 G MFS/sugar transport protein
PDEIFNDL_00134 1.4e-293 efeU_1 P Iron permease FTR1 family
PDEIFNDL_00135 1.4e-92 tpd P Fe2+ transport protein
PDEIFNDL_00136 3.6e-230 S Predicted membrane protein (DUF2318)
PDEIFNDL_00137 6.8e-219 macB_2 V ABC transporter permease
PDEIFNDL_00139 1.6e-201 Z012_06715 V FtsX-like permease family
PDEIFNDL_00140 9e-150 macB V ABC transporter, ATP-binding protein
PDEIFNDL_00141 1.1e-61 S FMN_bind
PDEIFNDL_00142 4.1e-89 K Psort location Cytoplasmic, score 8.87
PDEIFNDL_00143 1.1e-274 pip S YhgE Pip domain protein
PDEIFNDL_00144 0.0 pip S YhgE Pip domain protein
PDEIFNDL_00145 2e-225 S Putative ABC-transporter type IV
PDEIFNDL_00146 6e-38 nrdH O Glutaredoxin
PDEIFNDL_00147 1.9e-264 M cell wall binding repeat
PDEIFNDL_00148 8.3e-23
PDEIFNDL_00149 5.7e-80 xerH L Belongs to the 'phage' integrase family
PDEIFNDL_00150 4.7e-45 L Psort location Cytoplasmic, score 8.87
PDEIFNDL_00151 5.6e-123 L Integrase core domain
PDEIFNDL_00152 7.8e-35 S Putative ABC-transporter type IV
PDEIFNDL_00154 3e-261 kdpA 3.6.3.12 P Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
PDEIFNDL_00155 0.0 kdpB 3.6.3.12 P Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
PDEIFNDL_00156 3.4e-69 kdpC 3.6.3.12 P Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
PDEIFNDL_00157 0.0 T Osmosensitive K+ channel His kinase sensor domain
PDEIFNDL_00158 9e-106 KT Transcriptional regulatory protein, C terminal
PDEIFNDL_00159 1.2e-33 nrdH O Glutaredoxin
PDEIFNDL_00161 6.8e-306 pepD E Peptidase family C69
PDEIFNDL_00162 5.7e-194 XK27_01805 M Glycosyltransferase like family 2
PDEIFNDL_00163 1.1e-107 icaR K Bacterial regulatory proteins, tetR family
PDEIFNDL_00164 5.6e-167 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PDEIFNDL_00165 1.2e-236 amt U Ammonium Transporter Family
PDEIFNDL_00166 1e-54 glnB K Nitrogen regulatory protein P-II
PDEIFNDL_00167 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
PDEIFNDL_00168 2.6e-28 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
PDEIFNDL_00169 3.3e-248 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PDEIFNDL_00170 1.1e-251 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
PDEIFNDL_00171 2.1e-137 cobQ S CobB/CobQ-like glutamine amidotransferase domain
PDEIFNDL_00172 1e-24 S granule-associated protein
PDEIFNDL_00173 0.0 ubiB S ABC1 family
PDEIFNDL_00174 6.3e-193 K Periplasmic binding protein domain
PDEIFNDL_00175 1.1e-242 G Bacterial extracellular solute-binding protein
PDEIFNDL_00176 1.5e-07 P Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00177 3.1e-167 P Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00178 9.3e-147 G Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00179 0.0 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
PDEIFNDL_00180 0.0 sca1 3.2.1.187 GH121 DG Bacterial Ig-like domain (group 4)
PDEIFNDL_00181 0.0 G Bacterial Ig-like domain (group 4)
PDEIFNDL_00182 3.2e-208 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
PDEIFNDL_00183 2.7e-117 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PDEIFNDL_00184 3.9e-91
PDEIFNDL_00185 4.5e-224 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
PDEIFNDL_00186 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PDEIFNDL_00188 5.5e-141 cpaE D bacterial-type flagellum organization
PDEIFNDL_00189 1.6e-185 cpaF U Type II IV secretion system protein
PDEIFNDL_00190 5.8e-132 U Type ii secretion system
PDEIFNDL_00191 6.1e-91 gspF NU Type II secretion system (T2SS), protein F
PDEIFNDL_00192 1.3e-42 S Protein of unknown function (DUF4244)
PDEIFNDL_00193 5.1e-60 U TadE-like protein
PDEIFNDL_00194 3e-55 S TIGRFAM helicase secretion neighborhood TadE-like protein
PDEIFNDL_00195 4.9e-218 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
PDEIFNDL_00196 7.9e-193 S Psort location CytoplasmicMembrane, score
PDEIFNDL_00197 1.1e-96 K Bacterial regulatory proteins, tetR family
PDEIFNDL_00198 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
PDEIFNDL_00199 2.2e-105 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PDEIFNDL_00200 3.4e-135 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
PDEIFNDL_00201 1.4e-96 askB 1.1.1.3, 2.7.2.4 E ACT domain
PDEIFNDL_00202 2.7e-210 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PDEIFNDL_00203 0.0 3.2.1.22 G lipolytic protein G-D-S-L family
PDEIFNDL_00204 1.9e-271 rafA 3.2.1.22 G Psort location Cytoplasmic, score 8.87
PDEIFNDL_00205 4.1e-232 G Bacterial extracellular solute-binding protein
PDEIFNDL_00206 5.7e-156 malC G Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00207 1.8e-61 G Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00208 7.9e-71 G Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00209 2.7e-159 K Periplasmic binding protein domain
PDEIFNDL_00210 5.9e-46 K Acetyltransferase (GNAT) family
PDEIFNDL_00211 1.3e-23 S Protein of unknown function (DUF1778)
PDEIFNDL_00212 1.1e-06 2.7.13.3 T Histidine kinase
PDEIFNDL_00213 2.9e-39 K helix_turn_helix, Lux Regulon
PDEIFNDL_00214 3.8e-40
PDEIFNDL_00215 2.4e-115
PDEIFNDL_00216 1.9e-300 S Calcineurin-like phosphoesterase
PDEIFNDL_00217 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PDEIFNDL_00218 0.0 3.2.1.99 GH43 G C-terminal of Glycosyl hydrolases family 43
PDEIFNDL_00219 0.0 3.2.1.99 GH43 G C-terminal of Glycosyl hydrolases family 43
PDEIFNDL_00220 0.0 3.2.1.97 GH101 G Glycosyl hydrolases family 43
PDEIFNDL_00221 2.4e-195 K helix_turn _helix lactose operon repressor
PDEIFNDL_00222 8.7e-203 abf G Glycosyl hydrolases family 43
PDEIFNDL_00223 4.5e-244 G Bacterial extracellular solute-binding protein
PDEIFNDL_00224 9.1e-170 G Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00225 1.9e-156 U Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00226 0.0 S Beta-L-arabinofuranosidase, GH127
PDEIFNDL_00227 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
PDEIFNDL_00228 3.5e-216 ino1 5.5.1.4 I Myo-inositol-1-phosphate synthase
PDEIFNDL_00229 5.9e-235 glf 5.4.99.9 M UDP-galactopyranose mutase
PDEIFNDL_00230 8.1e-191 3.6.1.27 I PAP2 superfamily
PDEIFNDL_00231 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PDEIFNDL_00232 4.1e-113 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PDEIFNDL_00233 1.1e-193 holB 2.7.7.7 L DNA polymerase III
PDEIFNDL_00234 6e-183 K helix_turn _helix lactose operon repressor
PDEIFNDL_00235 6e-39 ptsH G PTS HPr component phosphorylation site
PDEIFNDL_00236 1e-285 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PDEIFNDL_00237 1.1e-106 S Phosphatidylethanolamine-binding protein
PDEIFNDL_00238 0.0 pepD E Peptidase family C69
PDEIFNDL_00239 9.1e-289 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
PDEIFNDL_00240 2.3e-62 S Macrophage migration inhibitory factor (MIF)
PDEIFNDL_00241 4.9e-96 S GtrA-like protein
PDEIFNDL_00242 2.1e-263 EGP Major facilitator Superfamily
PDEIFNDL_00243 4.6e-120 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
PDEIFNDL_00244 7e-184
PDEIFNDL_00245 1.2e-98 S Protein of unknown function (DUF805)
PDEIFNDL_00246 5.5e-297 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PDEIFNDL_00249 1.2e-280 S Calcineurin-like phosphoesterase
PDEIFNDL_00250 1.1e-139 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
PDEIFNDL_00251 7.1e-272 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PDEIFNDL_00252 1.3e-131 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PDEIFNDL_00253 3.6e-200 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
PDEIFNDL_00254 1e-256 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDEIFNDL_00255 5.1e-175 plsC2 2.3.1.51 I Phosphate acyltransferases
PDEIFNDL_00256 1.7e-179 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
PDEIFNDL_00257 2.2e-218 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PDEIFNDL_00258 1.7e-218 P Bacterial extracellular solute-binding protein
PDEIFNDL_00259 1.4e-157 U Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00260 6.2e-141 U Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00261 2.6e-214 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PDEIFNDL_00262 2.4e-177 S CAAX protease self-immunity
PDEIFNDL_00263 1.7e-137 M Mechanosensitive ion channel
PDEIFNDL_00264 5.9e-230 MA20_36090 S Psort location Cytoplasmic, score 8.87
PDEIFNDL_00265 2.4e-228 MA20_36090 S Psort location Cytoplasmic, score 8.87
PDEIFNDL_00266 6.3e-125 K Bacterial regulatory proteins, tetR family
PDEIFNDL_00267 1.4e-231 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
PDEIFNDL_00268 5.8e-76 gntK 2.7.1.12 F Shikimate kinase
PDEIFNDL_00269 4.8e-126 gntR K FCD
PDEIFNDL_00270 1.9e-229 yxiO S Vacuole effluxer Atg22 like
PDEIFNDL_00271 0.0 S Psort location Cytoplasmic, score 8.87
PDEIFNDL_00272 8.4e-30 rpmB J Ribosomal L28 family
PDEIFNDL_00273 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
PDEIFNDL_00274 4.7e-100 rsmD 2.1.1.171 L Conserved hypothetical protein 95
PDEIFNDL_00275 1.5e-90 K helix_turn_helix, arabinose operon control protein
PDEIFNDL_00276 7.1e-138 uhpT EGP Major facilitator Superfamily
PDEIFNDL_00277 2.1e-148 I alpha/beta hydrolase fold
PDEIFNDL_00278 2.5e-148 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PDEIFNDL_00279 3.6e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PDEIFNDL_00280 1.8e-34 CP_0960 S Belongs to the UPF0109 family
PDEIFNDL_00281 3.9e-54 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PDEIFNDL_00282 2e-178 S Endonuclease/Exonuclease/phosphatase family
PDEIFNDL_00283 1.5e-265 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PDEIFNDL_00284 2.1e-302 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDEIFNDL_00285 1.9e-152 guaA1 6.3.5.2 F Peptidase C26
PDEIFNDL_00286 0.0 yjjK S ABC transporter
PDEIFNDL_00287 6.4e-96
PDEIFNDL_00288 6.7e-248 S Domain of unknown function (DUF4143)
PDEIFNDL_00289 5.7e-92 ilvN 2.2.1.6 E ACT domain
PDEIFNDL_00290 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
PDEIFNDL_00291 5.7e-136 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PDEIFNDL_00292 1e-19 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PDEIFNDL_00293 2e-112 yceD S Uncharacterized ACR, COG1399
PDEIFNDL_00294 8.5e-134
PDEIFNDL_00295 2.2e-87 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PDEIFNDL_00296 3.2e-58 S Protein of unknown function (DUF3039)
PDEIFNDL_00297 1.7e-195 yghZ C Aldo/keto reductase family
PDEIFNDL_00298 5.4e-77 soxR K MerR, DNA binding
PDEIFNDL_00299 1.2e-120 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PDEIFNDL_00300 1e-139 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
PDEIFNDL_00301 3.8e-251 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDEIFNDL_00302 8.2e-243 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
PDEIFNDL_00303 5.9e-220 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
PDEIFNDL_00306 5.4e-181 S Auxin Efflux Carrier
PDEIFNDL_00307 0.0 pgi 5.3.1.9 G Belongs to the GPI family
PDEIFNDL_00308 3e-60 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PDEIFNDL_00309 1.3e-122 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PDEIFNDL_00310 7.2e-138 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDEIFNDL_00311 1.9e-127 V ATPases associated with a variety of cellular activities
PDEIFNDL_00312 5.7e-267 V Efflux ABC transporter, permease protein
PDEIFNDL_00313 2.3e-165 mdcF S Transporter, auxin efflux carrier (AEC) family protein
PDEIFNDL_00314 3.1e-231 dapE 3.5.1.18 E Peptidase dimerisation domain
PDEIFNDL_00315 1.5e-308 rne 3.1.26.12 J Ribonuclease E/G family
PDEIFNDL_00316 2.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
PDEIFNDL_00317 2.6e-39 rpmA J Ribosomal L27 protein
PDEIFNDL_00318 2.3e-311 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PDEIFNDL_00319 5.1e-204 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PDEIFNDL_00320 7.4e-233 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
PDEIFNDL_00322 1.2e-32 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PDEIFNDL_00323 2.9e-129 nusG K Participates in transcription elongation, termination and antitermination
PDEIFNDL_00324 2.3e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PDEIFNDL_00325 3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PDEIFNDL_00326 1e-139 QT PucR C-terminal helix-turn-helix domain
PDEIFNDL_00327 0.0
PDEIFNDL_00328 1.3e-162 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
PDEIFNDL_00329 2.1e-79 bioY S BioY family
PDEIFNDL_00330 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
PDEIFNDL_00331 0.0 pccB I Carboxyl transferase domain
PDEIFNDL_00332 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
PDEIFNDL_00334 2.6e-82 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PDEIFNDL_00335 0.0 ams 2.4.1.4, 3.2.1.1, 5.4.99.16 GH13 G Alpha amylase, catalytic domain
PDEIFNDL_00337 5.4e-116
PDEIFNDL_00338 1.7e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PDEIFNDL_00339 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PDEIFNDL_00340 1.7e-91 lemA S LemA family
PDEIFNDL_00341 0.0 S Predicted membrane protein (DUF2207)
PDEIFNDL_00342 9.7e-171 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
PDEIFNDL_00343 7e-297 yegQ O Peptidase family U32 C-terminal domain
PDEIFNDL_00344 3.1e-184 yfiH Q Multi-copper polyphenol oxidoreductase laccase
PDEIFNDL_00345 5.5e-144 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PDEIFNDL_00346 3.4e-126 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PDEIFNDL_00347 2.9e-58 D nuclear chromosome segregation
PDEIFNDL_00348 5.1e-267 pepC 3.4.22.40 E Peptidase C1-like family
PDEIFNDL_00349 7.4e-211 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PDEIFNDL_00350 2.2e-221 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PDEIFNDL_00351 1.8e-122 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PDEIFNDL_00352 2.2e-220 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
PDEIFNDL_00353 3.4e-129 KT Transcriptional regulatory protein, C terminal
PDEIFNDL_00354 1.2e-197 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
PDEIFNDL_00355 3.4e-164 pstC P probably responsible for the translocation of the substrate across the membrane
PDEIFNDL_00356 4e-168 pstA P Phosphate transport system permease
PDEIFNDL_00357 3.6e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDEIFNDL_00358 1.8e-143 P Zinc-uptake complex component A periplasmic
PDEIFNDL_00359 1.3e-246 pbuO S Permease family
PDEIFNDL_00360 1.1e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PDEIFNDL_00361 2.4e-36 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PDEIFNDL_00362 2.1e-175 T Forkhead associated domain
PDEIFNDL_00363 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
PDEIFNDL_00364 1.1e-35
PDEIFNDL_00365 6.5e-93 flgA NO SAF
PDEIFNDL_00366 1.3e-29 fmdB S Putative regulatory protein
PDEIFNDL_00367 1.6e-100 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
PDEIFNDL_00368 7.4e-112 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
PDEIFNDL_00369 1.6e-147
PDEIFNDL_00370 2.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PDEIFNDL_00374 5.5e-25 rpmG J Ribosomal protein L33
PDEIFNDL_00375 1.6e-203 murB 1.3.1.98 M Cell wall formation
PDEIFNDL_00376 1.3e-266 E aromatic amino acid transport protein AroP K03293
PDEIFNDL_00377 8.3e-59 fdxA C 4Fe-4S binding domain
PDEIFNDL_00378 5.6e-214 dapC E Aminotransferase class I and II
PDEIFNDL_00380 9.4e-110 E Bacterial extracellular solute-binding proteins, family 5 Middle
PDEIFNDL_00381 2.7e-210 E Bacterial extracellular solute-binding proteins, family 5 Middle
PDEIFNDL_00382 3.1e-181 EP Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00383 1.1e-140 EP Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00384 5.1e-156 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
PDEIFNDL_00385 2.8e-151 dppF E ABC transporter
PDEIFNDL_00386 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
PDEIFNDL_00388 0.0 G Psort location Cytoplasmic, score 8.87
PDEIFNDL_00389 7.7e-232 3.2.1.156 GH8 G CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
PDEIFNDL_00390 0.0 G candidate polyfunctional acetylxylan esterase b-xylosidase A-L-arabinofuranosidase, CBM9 module, glycoside hydrolase family 43 protein and carbohydrate esterase family 6 protein K01238
PDEIFNDL_00391 7.3e-296 CE10 I Belongs to the type-B carboxylesterase lipase family
PDEIFNDL_00393 9.4e-226 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PDEIFNDL_00394 2.7e-252 M Bacterial capsule synthesis protein PGA_cap
PDEIFNDL_00395 2.7e-185 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDEIFNDL_00396 2.1e-114 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
PDEIFNDL_00397 6.9e-122
PDEIFNDL_00398 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
PDEIFNDL_00399 2.4e-80 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PDEIFNDL_00400 3.4e-67 rpsI J Belongs to the universal ribosomal protein uS9 family
PDEIFNDL_00401 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
PDEIFNDL_00402 2.8e-177 tdh 1.1.1.14 C Zinc-binding dehydrogenase
PDEIFNDL_00403 3.2e-226 EGP Major facilitator Superfamily
PDEIFNDL_00404 6.1e-75 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDEIFNDL_00405 7.6e-216 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
PDEIFNDL_00406 1.3e-235 EGP Major facilitator Superfamily
PDEIFNDL_00407 9.5e-197 Z012_01000 1.1.1.14, 1.1.1.9 C Zinc-binding dehydrogenase
PDEIFNDL_00408 7.3e-183 rhaR_1 K helix_turn_helix, arabinose operon control protein
PDEIFNDL_00409 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PDEIFNDL_00410 5.2e-50 rpsJ J Involved in the binding of tRNA to the ribosomes
PDEIFNDL_00411 2.3e-116 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PDEIFNDL_00412 1.4e-116 rplD J Forms part of the polypeptide exit tunnel
PDEIFNDL_00413 6.8e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PDEIFNDL_00414 6.1e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PDEIFNDL_00415 1.3e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PDEIFNDL_00416 1.9e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PDEIFNDL_00417 1e-97 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PDEIFNDL_00418 1.7e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PDEIFNDL_00419 5e-38 rpmC J Belongs to the universal ribosomal protein uL29 family
PDEIFNDL_00420 4.9e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PDEIFNDL_00421 3e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PDEIFNDL_00422 8.7e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PDEIFNDL_00423 7.5e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PDEIFNDL_00424 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDEIFNDL_00425 5.5e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PDEIFNDL_00426 3.8e-96 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PDEIFNDL_00427 3.3e-59 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PDEIFNDL_00428 1.5e-92 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PDEIFNDL_00429 3.4e-25 rpmD J Ribosomal protein L30p/L7e
PDEIFNDL_00430 9.8e-74 rplO J binds to the 23S rRNA
PDEIFNDL_00431 3.8e-238 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PDEIFNDL_00432 5.5e-98 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PDEIFNDL_00433 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PDEIFNDL_00434 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PDEIFNDL_00435 3.3e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PDEIFNDL_00436 1.9e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PDEIFNDL_00437 4.7e-185 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDEIFNDL_00438 1.3e-66 rplQ J Ribosomal protein L17
PDEIFNDL_00439 4.4e-183 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PDEIFNDL_00441 3.7e-109
PDEIFNDL_00442 6.1e-191 nusA K Participates in both transcription termination and antitermination
PDEIFNDL_00443 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PDEIFNDL_00444 2.2e-69 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PDEIFNDL_00445 5.1e-188 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PDEIFNDL_00446 6.8e-218 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
PDEIFNDL_00447 2.7e-250 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PDEIFNDL_00448 3.8e-108
PDEIFNDL_00450 2.4e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PDEIFNDL_00451 3e-213 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDEIFNDL_00452 3e-251 T GHKL domain
PDEIFNDL_00453 2.1e-151 T LytTr DNA-binding domain
PDEIFNDL_00454 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PDEIFNDL_00455 0.0 crr G pts system, glucose-specific IIABC component
PDEIFNDL_00456 6.4e-154 arbG K CAT RNA binding domain
PDEIFNDL_00457 1.6e-197 I Diacylglycerol kinase catalytic domain
PDEIFNDL_00458 9.2e-242 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PDEIFNDL_00460 6.7e-187 yegU O ADP-ribosylglycohydrolase
PDEIFNDL_00461 8.3e-190 yegV G pfkB family carbohydrate kinase
PDEIFNDL_00462 4.5e-269 U Permease for cytosine/purines, uracil, thiamine, allantoin
PDEIFNDL_00463 1.8e-101 Q Isochorismatase family
PDEIFNDL_00464 1.9e-121 degU K helix_turn_helix, Lux Regulon
PDEIFNDL_00465 3e-258 tcsS3 KT PspC domain
PDEIFNDL_00466 1.5e-147 pspC KT PspC domain
PDEIFNDL_00467 7.1e-93
PDEIFNDL_00468 3.3e-115 S Protein of unknown function (DUF4125)
PDEIFNDL_00469 0.0 S Domain of unknown function (DUF4037)
PDEIFNDL_00470 7.5e-214 araJ EGP Major facilitator Superfamily
PDEIFNDL_00472 1.5e-264 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PDEIFNDL_00473 0.0 S Psort location CytoplasmicMembrane, score 9.99
PDEIFNDL_00474 2.1e-241 V ABC transporter permease
PDEIFNDL_00475 2.9e-157 V ABC transporter
PDEIFNDL_00476 5.1e-150 T HD domain
PDEIFNDL_00477 1e-167 S Glutamine amidotransferase domain
PDEIFNDL_00478 0.0 kup P Transport of potassium into the cell
PDEIFNDL_00479 2.2e-184 tatD L TatD related DNase
PDEIFNDL_00480 0.0 G Alpha-L-arabinofuranosidase C-terminus
PDEIFNDL_00481 8.1e-22 rafA 3.2.1.22 G alpha-galactosidase
PDEIFNDL_00482 1.8e-223 K helix_turn _helix lactose operon repressor
PDEIFNDL_00483 0.0 rafA 3.2.1.22 G Psort location Cytoplasmic, score 8.87
PDEIFNDL_00484 8e-126
PDEIFNDL_00485 0.0 yknV V ABC transporter
PDEIFNDL_00486 0.0 mdlA2 V ABC transporter
PDEIFNDL_00487 9.7e-216 lipA I Hydrolase, alpha beta domain protein
PDEIFNDL_00488 5e-27 S Psort location Cytoplasmic, score 8.87
PDEIFNDL_00489 3.8e-156 I alpha/beta hydrolase fold
PDEIFNDL_00490 6.5e-234 M Protein of unknown function (DUF2961)
PDEIFNDL_00491 3.2e-153 P Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00492 3.2e-159 G Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00493 5.1e-256 G Bacterial extracellular solute-binding protein
PDEIFNDL_00494 3.8e-190 K helix_turn _helix lactose operon repressor
PDEIFNDL_00495 0.0 M probably involved in cell wall
PDEIFNDL_00496 4.5e-252 3.2.1.14 GH18 S Carbohydrate binding domain
PDEIFNDL_00497 0.0 T Diguanylate cyclase, GGDEF domain
PDEIFNDL_00498 1.9e-186 lacR K Transcriptional regulator, LacI family
PDEIFNDL_00499 3.3e-223 nagA 3.5.1.25 G Amidohydrolase family
PDEIFNDL_00500 7.6e-149 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PDEIFNDL_00501 0.0 G Glycosyl hydrolase family 20, domain 2
PDEIFNDL_00502 1.9e-172 2.7.1.2 GK ROK family
PDEIFNDL_00503 4.4e-164 G ABC transporter permease
PDEIFNDL_00504 7.5e-147 G Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00505 4.2e-242 G Bacterial extracellular solute-binding protein
PDEIFNDL_00506 5.6e-211 GK ROK family
PDEIFNDL_00507 2.1e-264 lacS G Psort location CytoplasmicMembrane, score 10.00
PDEIFNDL_00508 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PDEIFNDL_00509 4.1e-135 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway. Thus, catalyzes the conversion of 4-amino-5-aminomethyl-2-methylpyrimidine to 4-amino- 5-hydroxymethyl-2-methylpyrimidine (HMP)
PDEIFNDL_00511 0.0 cbgA_1 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PDEIFNDL_00512 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PDEIFNDL_00513 6.6e-107
PDEIFNDL_00514 4.9e-180 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PDEIFNDL_00515 2.8e-17 3.2.1.78 GH26 G Glycosyl hydrolase family 26
PDEIFNDL_00516 1.9e-124 dedA S SNARE associated Golgi protein
PDEIFNDL_00518 5.7e-129 S HAD hydrolase, family IA, variant 3
PDEIFNDL_00519 8.6e-47
PDEIFNDL_00520 2e-115 hspR K transcriptional regulator, MerR family
PDEIFNDL_00521 1.5e-162 dnaJ1 O DnaJ molecular chaperone homology domain
PDEIFNDL_00522 2.8e-48 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PDEIFNDL_00523 0.0 dnaK O Heat shock 70 kDa protein
PDEIFNDL_00524 1.3e-145 S Mitochondrial biogenesis AIM24
PDEIFNDL_00525 1.6e-54 phoA 3.1.3.1, 3.1.3.39 P Alkaline phosphatase homologues
PDEIFNDL_00526 2.9e-120 S membrane transporter protein
PDEIFNDL_00527 8.3e-193 K Psort location Cytoplasmic, score
PDEIFNDL_00528 6e-129 traX S TraX protein
PDEIFNDL_00529 5.4e-144 S HAD-hyrolase-like
PDEIFNDL_00530 1.5e-226 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
PDEIFNDL_00531 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
PDEIFNDL_00532 2.9e-13 S Transposon-encoded protein TnpV
PDEIFNDL_00533 9.7e-109 pepE 3.4.13.21 E Peptidase family S51
PDEIFNDL_00534 1.4e-105 S Protein of unknown function, DUF624
PDEIFNDL_00535 6.8e-153 rafG G ABC transporter permease
PDEIFNDL_00536 3.7e-154 msmF G Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00537 1.7e-182 K Psort location Cytoplasmic, score
PDEIFNDL_00538 7.2e-184 K Periplasmic binding protein-like domain
PDEIFNDL_00539 7e-264 amyE G Bacterial extracellular solute-binding protein
PDEIFNDL_00540 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
PDEIFNDL_00541 5.6e-258 amyE G Bacterial extracellular solute-binding protein
PDEIFNDL_00542 2.4e-135 G Phosphoglycerate mutase family
PDEIFNDL_00543 1.9e-62 S Protein of unknown function (DUF4235)
PDEIFNDL_00544 3.9e-142 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
PDEIFNDL_00545 1.5e-44
PDEIFNDL_00546 5.7e-85 K Cro/C1-type HTH DNA-binding domain
PDEIFNDL_00547 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
PDEIFNDL_00548 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PDEIFNDL_00549 1.7e-125 S Short repeat of unknown function (DUF308)
PDEIFNDL_00550 2.7e-49 S Antitoxin component of a toxin-antitoxin (TA) module
PDEIFNDL_00551 3.4e-55 DJ Addiction module toxin, RelE StbE family
PDEIFNDL_00552 4.5e-13 S Psort location Extracellular, score 8.82
PDEIFNDL_00553 2.9e-232 EGP Major facilitator Superfamily
PDEIFNDL_00554 1.2e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDEIFNDL_00555 2e-269 KLT Domain of unknown function (DUF4032)
PDEIFNDL_00556 1.6e-210 ugpC E Belongs to the ABC transporter superfamily
PDEIFNDL_00557 2.8e-131 K LytTr DNA-binding domain
PDEIFNDL_00558 1.6e-234 T GHKL domain
PDEIFNDL_00559 1.9e-70
PDEIFNDL_00560 2.9e-217 clcA_2 P Voltage gated chloride channel
PDEIFNDL_00561 6.1e-49 S Psort location Cytoplasmic, score
PDEIFNDL_00562 2.6e-138
PDEIFNDL_00563 8e-145 3.4.22.70 M Sortase family
PDEIFNDL_00564 4.1e-178 M LPXTG-motif cell wall anchor domain protein
PDEIFNDL_00565 1.2e-14 S LPXTG-motif cell wall anchor domain protein
PDEIFNDL_00566 0.0 S LPXTG-motif cell wall anchor domain protein
PDEIFNDL_00567 3.7e-10 S LPXTG-motif cell wall anchor domain protein
PDEIFNDL_00568 1.3e-72 S GtrA-like protein
PDEIFNDL_00569 0.0 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
PDEIFNDL_00570 9.2e-119 ybjG 3.6.1.27 I Psort location CytoplasmicMembrane, score
PDEIFNDL_00571 1.5e-79 ypeA 2.3.1.1 K Psort location Cytoplasmic, score 8.87
PDEIFNDL_00572 1.1e-113 vex2 V ABC transporter, ATP-binding protein
PDEIFNDL_00573 2.2e-213 vex1 V Efflux ABC transporter, permease protein
PDEIFNDL_00574 1.1e-240 vex3 V ABC transporter permease
PDEIFNDL_00575 1.8e-24 G Major facilitator Superfamily
PDEIFNDL_00576 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PDEIFNDL_00577 1.4e-181 lacR K Transcriptional regulator, LacI family
PDEIFNDL_00578 0.0 3.2.1.51 GH95 G Glycosyl hydrolase family 65, N-terminal domain
PDEIFNDL_00579 8.3e-165 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
PDEIFNDL_00580 8.1e-159 S Amidohydrolase
PDEIFNDL_00581 2.2e-145 IQ KR domain
PDEIFNDL_00582 6.8e-245 4.2.1.68 M Enolase C-terminal domain-like
PDEIFNDL_00583 4.4e-266 G Bacterial extracellular solute-binding protein
PDEIFNDL_00584 1.1e-175 P Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00585 4.2e-164 P Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00586 3.3e-189 K Bacterial regulatory proteins, lacI family
PDEIFNDL_00587 2.3e-53 lacZ5 3.2.1.23 G beta-galactosidase activity
PDEIFNDL_00588 1.5e-263 G Bacterial extracellular solute-binding protein
PDEIFNDL_00589 3.7e-169 K helix_turn _helix lactose operon repressor
PDEIFNDL_00590 8.3e-110 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
PDEIFNDL_00591 1e-16 G Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00592 7.6e-151 G ABC transporter permease
PDEIFNDL_00593 3.8e-12 S Psort location Extracellular, score 8.82
PDEIFNDL_00594 5e-307 trxB1 1.8.1.9 C Thioredoxin domain
PDEIFNDL_00595 3.2e-106 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
PDEIFNDL_00596 1.5e-109 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
PDEIFNDL_00597 2.6e-155 G Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00598 6.6e-157 G Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00599 1.5e-244 msmE7 G Bacterial extracellular solute-binding protein
PDEIFNDL_00600 3.4e-230 nagC GK ROK family
PDEIFNDL_00601 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
PDEIFNDL_00602 1.4e-77 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PDEIFNDL_00603 0.0 yjcE P Sodium/hydrogen exchanger family
PDEIFNDL_00604 2.7e-154 ypfH S Phospholipase/Carboxylesterase
PDEIFNDL_00605 4e-112 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
PDEIFNDL_00606 1.3e-47 L PFAM Integrase catalytic
PDEIFNDL_00607 3.3e-203 rbsR K helix_turn _helix lactose operon repressor
PDEIFNDL_00608 6.3e-210 malE G Bacterial extracellular solute-binding protein
PDEIFNDL_00609 1e-162 U Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00610 8.7e-159 U Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00611 5.6e-238 bglA 3.2.1.21 G Glycosyl hydrolase family 1
PDEIFNDL_00612 2.3e-18 ET Bacterial periplasmic substrate-binding proteins
PDEIFNDL_00613 3e-68 odh 1.5.1.28 I glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
PDEIFNDL_00614 6.2e-73 3.6.3.21 E ABC transporter
PDEIFNDL_00615 4.3e-36 E Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00616 2.3e-37 yxeN P amino acid ABC transporter
PDEIFNDL_00617 6.9e-50 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
PDEIFNDL_00618 4.1e-234 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
PDEIFNDL_00619 6.2e-145 cobB2 K Sir2 family
PDEIFNDL_00620 1.1e-171 I alpha/beta hydrolase fold
PDEIFNDL_00621 2.8e-242 L PFAM Integrase catalytic
PDEIFNDL_00622 1.1e-141 L IstB-like ATP binding protein
PDEIFNDL_00623 3e-26 L transposase activity
PDEIFNDL_00624 9.3e-108 L Transposase and inactivated derivatives
PDEIFNDL_00625 1.3e-190 K helix_turn _helix lactose operon repressor
PDEIFNDL_00626 7.4e-250 G Psort location CytoplasmicMembrane, score 10.00
PDEIFNDL_00627 4.1e-99 S Serine aminopeptidase, S33
PDEIFNDL_00628 1.1e-206 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
PDEIFNDL_00629 3e-139 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDEIFNDL_00630 0.0 4.2.1.53 S MCRA family
PDEIFNDL_00631 7.4e-89 phoU P Plays a role in the regulation of phosphate uptake
PDEIFNDL_00632 2.4e-215 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDEIFNDL_00633 6.2e-41
PDEIFNDL_00634 8.2e-218 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PDEIFNDL_00635 1.3e-165 usp 3.5.1.28 CBM50 S CHAP domain
PDEIFNDL_00636 1.3e-79 M NlpC/P60 family
PDEIFNDL_00637 1.3e-190 T Universal stress protein family
PDEIFNDL_00638 7.7e-73 attW O OsmC-like protein
PDEIFNDL_00639 3.8e-181 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PDEIFNDL_00640 6.4e-130 folA 1.5.1.3 H dihydrofolate reductase
PDEIFNDL_00641 1.1e-86 ptpA 3.1.3.48 T low molecular weight
PDEIFNDL_00643 9e-200 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PDEIFNDL_00644 4.4e-160 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PDEIFNDL_00648 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
PDEIFNDL_00649 3e-162
PDEIFNDL_00650 0.0 S Uncharacterised protein conserved in bacteria (DUF2194)
PDEIFNDL_00651 1.8e-102 pelF GT4 M Domain of unknown function (DUF3492)
PDEIFNDL_00652 1.5e-129 pelF GT4 M Domain of unknown function (DUF3492)
PDEIFNDL_00653 1.1e-284 pelG S Putative exopolysaccharide Exporter (EPS-E)
PDEIFNDL_00654 2.5e-309 cotH M CotH kinase protein
PDEIFNDL_00655 1.4e-158 P VTC domain
PDEIFNDL_00656 1.1e-110 S Domain of unknown function (DUF4956)
PDEIFNDL_00657 0.0 yliE T Putative diguanylate phosphodiesterase
PDEIFNDL_00658 1.8e-204 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
PDEIFNDL_00659 5.5e-180 3.4.14.13 M Glycosyltransferase like family 2
PDEIFNDL_00660 1.8e-236 S AI-2E family transporter
PDEIFNDL_00661 6.3e-232 epsG M Glycosyl transferase family 21
PDEIFNDL_00662 4.4e-232 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
PDEIFNDL_00663 1.5e-200 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PDEIFNDL_00664 8.6e-99 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PDEIFNDL_00665 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PDEIFNDL_00666 9.6e-115 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
PDEIFNDL_00667 1e-154 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PDEIFNDL_00668 2.4e-273 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PDEIFNDL_00669 1.4e-93 S Protein of unknown function (DUF3180)
PDEIFNDL_00670 8.5e-165 tesB I Thioesterase-like superfamily
PDEIFNDL_00671 0.0 yjjK S ATP-binding cassette protein, ChvD family
PDEIFNDL_00672 2.2e-181 V Beta-lactamase
PDEIFNDL_00673 2.5e-74 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PDEIFNDL_00674 2.8e-84 ribD 1.1.1.193, 3.5.4.26 H Cytidine and deoxycytidylate deaminase zinc-binding region
PDEIFNDL_00675 5.1e-256 G ABC transporter periplasmic binding protein YcjN precursor K02027
PDEIFNDL_00676 2.1e-174 U Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00677 4.3e-150 G Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00678 0.0 G Psort location Cytoplasmic, score 8.87
PDEIFNDL_00679 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
PDEIFNDL_00680 0.0 O Highly conserved protein containing a thioredoxin domain
PDEIFNDL_00681 1.5e-235 3.2.1.156 GH8 G CBM9 module, glycoside hydrolase family 8 protein and carbohydrate esterase family 4 protein K01238
PDEIFNDL_00682 0.0 3.1.1.53 G Glycosyl hydrolase family 2, sugar binding domain protein
PDEIFNDL_00683 8.6e-09 bdhA C Iron-containing alcohol dehydrogenase
PDEIFNDL_00684 1.4e-214 bdhA C Iron-containing alcohol dehydrogenase
PDEIFNDL_00685 9.5e-169 F Inosine-uridine preferring nucleoside hydrolase
PDEIFNDL_00686 2.6e-291 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
PDEIFNDL_00687 4.7e-227 xylR GK ROK family
PDEIFNDL_00688 9.3e-88 ykoE S ABC-type cobalt transport system, permease component
PDEIFNDL_00689 2.3e-37 ydcZ S Putative inner membrane exporter, YdcZ
PDEIFNDL_00690 9.6e-40 ydcZ S Putative inner membrane exporter, YdcZ
PDEIFNDL_00691 3.8e-106 S Membrane
PDEIFNDL_00692 7e-278 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PDEIFNDL_00693 1.6e-249 metY 2.5.1.49 H Psort location Cytoplasmic, score 9.98
PDEIFNDL_00694 3e-267 xylA 5.3.1.5 G Belongs to the xylose isomerase family
PDEIFNDL_00695 0.0 3.2.1.37, 3.2.1.55 GH43,GH51 G Belongs to the glycosyl hydrolase 43 family
PDEIFNDL_00696 5.1e-187 K Bacterial regulatory proteins, lacI family
PDEIFNDL_00697 2.4e-242 msmE G ABC transporter periplasmic binding protein YcjN precursor K02027
PDEIFNDL_00698 7.6e-186 MA20_14025 U Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00699 2.4e-164 MA20_14020 P Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00700 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
PDEIFNDL_00701 0.0 3.1.1.53 G Glycosyl hydrolase family 2, sugar binding domain protein
PDEIFNDL_00702 2.1e-106 lacA 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
PDEIFNDL_00703 1.2e-288 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
PDEIFNDL_00704 5.7e-225 xylR GK ROK family
PDEIFNDL_00706 1.5e-35 rpmE J Binds the 23S rRNA
PDEIFNDL_00707 1.4e-190 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PDEIFNDL_00708 3.2e-172 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PDEIFNDL_00709 2.7e-219 livK E Receptor family ligand binding region
PDEIFNDL_00710 9.5e-156 U Belongs to the binding-protein-dependent transport system permease family
PDEIFNDL_00711 6.7e-196 livM U Belongs to the binding-protein-dependent transport system permease family
PDEIFNDL_00712 2.4e-150 E Branched-chain amino acid ATP-binding cassette transporter
PDEIFNDL_00713 1.9e-124 livF E ATPases associated with a variety of cellular activities
PDEIFNDL_00714 3.8e-114 ywlC 2.7.7.87 J Belongs to the SUA5 family
PDEIFNDL_00715 4.5e-195 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
PDEIFNDL_00716 2.7e-288 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PDEIFNDL_00717 2.2e-122 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
PDEIFNDL_00718 4.6e-160 supH S Sucrose-6F-phosphate phosphohydrolase
PDEIFNDL_00719 2.5e-269 recD2 3.6.4.12 L PIF1-like helicase
PDEIFNDL_00720 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PDEIFNDL_00721 3.1e-98 L Single-strand binding protein family
PDEIFNDL_00722 0.0 pepO 3.4.24.71 O Peptidase family M13
PDEIFNDL_00723 1.6e-151 map 3.4.11.18 E Methionine aminopeptidase
PDEIFNDL_00724 1.6e-249 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
PDEIFNDL_00725 1.7e-142 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
PDEIFNDL_00726 4e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PDEIFNDL_00727 1.1e-190 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PDEIFNDL_00728 8.9e-168 ftsE D Cell division ATP-binding protein FtsE
PDEIFNDL_00729 1.5e-161 ftsX D Part of the ABC transporter FtsEX involved in cellular division
PDEIFNDL_00730 1.3e-148 usp 3.5.1.28 CBM50 D CHAP domain protein
PDEIFNDL_00731 2e-77 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PDEIFNDL_00732 3e-157 pknD ET ABC transporter, substrate-binding protein, family 3
PDEIFNDL_00733 2.5e-151 pknD ET ABC transporter, substrate-binding protein, family 3
PDEIFNDL_00734 1.9e-127 pknD ET ABC transporter, substrate-binding protein, family 3
PDEIFNDL_00735 2.8e-142 yecS E Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00736 8.5e-145 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
PDEIFNDL_00737 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PDEIFNDL_00738 1.8e-144 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
PDEIFNDL_00739 5.3e-229 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
PDEIFNDL_00740 1.4e-189 K Periplasmic binding protein domain
PDEIFNDL_00741 3.8e-166 G ABC transporter permease
PDEIFNDL_00742 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PDEIFNDL_00743 0.0 abfA1 3.2.1.55 GH51 G arabinose metabolic process
PDEIFNDL_00744 2.2e-246 G Bacterial extracellular solute-binding protein
PDEIFNDL_00745 1.1e-275 G Bacterial extracellular solute-binding protein
PDEIFNDL_00746 4.8e-122 K Transcriptional regulatory protein, C terminal
PDEIFNDL_00747 1.8e-142 T His Kinase A (phosphoacceptor) domain
PDEIFNDL_00748 7e-82 S SnoaL-like domain
PDEIFNDL_00749 2e-143 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PDEIFNDL_00750 2.7e-241 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PDEIFNDL_00751 7.8e-294 E ABC transporter, substrate-binding protein, family 5
PDEIFNDL_00752 1.1e-165 P Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00753 1.2e-139 EP Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00754 7.1e-136 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
PDEIFNDL_00755 1.5e-138 sapF E ATPases associated with a variety of cellular activities
PDEIFNDL_00756 9.9e-191 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
PDEIFNDL_00757 1.1e-217 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PDEIFNDL_00758 0.0 macB_2 V ATPases associated with a variety of cellular activities
PDEIFNDL_00759 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PDEIFNDL_00760 3.9e-92 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PDEIFNDL_00761 2.7e-102 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PDEIFNDL_00762 3.1e-270 yhdG E aromatic amino acid transport protein AroP K03293
PDEIFNDL_00763 2.2e-306 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PDEIFNDL_00764 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PDEIFNDL_00765 8.1e-216 ybiR P Citrate transporter
PDEIFNDL_00767 2.3e-176 ydcZ S Putative inner membrane exporter, YdcZ
PDEIFNDL_00769 0.0 tetP J Elongation factor G, domain IV
PDEIFNDL_00773 2.7e-114 K acetyltransferase
PDEIFNDL_00774 8.9e-108 papP E Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00775 3.6e-120 E Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00776 1.5e-152 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
PDEIFNDL_00777 2e-142 cjaA ET Bacterial periplasmic substrate-binding proteins
PDEIFNDL_00778 1.4e-200 panE1 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PDEIFNDL_00779 2.6e-155 metQ M NLPA lipoprotein
PDEIFNDL_00780 6.5e-193 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PDEIFNDL_00781 4.9e-98 metI P Psort location CytoplasmicMembrane, score 9.99
PDEIFNDL_00782 2.2e-221 mtnE 2.6.1.83 E Aminotransferase class I and II
PDEIFNDL_00783 3.2e-75 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PDEIFNDL_00784 1.4e-43 XAC3035 O Glutaredoxin
PDEIFNDL_00785 3.1e-127 XK27_08050 O prohibitin homologues
PDEIFNDL_00786 2e-14 S Domain of unknown function (DUF4143)
PDEIFNDL_00787 7.4e-75
PDEIFNDL_00788 2.8e-134 V ATPases associated with a variety of cellular activities
PDEIFNDL_00789 1.7e-146 M Conserved repeat domain
PDEIFNDL_00790 2e-256 macB_8 V MacB-like periplasmic core domain
PDEIFNDL_00791 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PDEIFNDL_00792 1.2e-183 adh3 C Zinc-binding dehydrogenase
PDEIFNDL_00793 1.1e-84 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PDEIFNDL_00794 1.3e-226 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PDEIFNDL_00795 2.3e-89 zur P Belongs to the Fur family
PDEIFNDL_00796 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
PDEIFNDL_00797 2.5e-203 psuK 2.7.1.15, 2.7.1.45, 2.7.1.83 G pfkB family carbohydrate kinase
PDEIFNDL_00798 9.1e-189 yeiI 2.7.1.15, 2.7.1.45, 2.7.1.83 G pfkB family carbohydrate kinase
PDEIFNDL_00799 3.3e-129 trpF 5.3.1.24 E N-(5'phosphoribosyl)anthranilate (PRA) isomerase
PDEIFNDL_00800 5.6e-214 1.1.1.1 C Iron-containing alcohol dehydrogenase
PDEIFNDL_00801 1.1e-183 rihB 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PDEIFNDL_00802 2.1e-247 EGP Major facilitator Superfamily
PDEIFNDL_00803 2.8e-235 purD 6.3.4.13 F Belongs to the GARS family
PDEIFNDL_00804 8.3e-185 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PDEIFNDL_00805 1e-284 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PDEIFNDL_00806 1.1e-257 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
PDEIFNDL_00807 1.2e-24
PDEIFNDL_00808 8.7e-119 2.7.1.196, 2.7.1.205 K sequence-specific DNA binding
PDEIFNDL_00810 4.3e-165
PDEIFNDL_00811 4.9e-64
PDEIFNDL_00812 8.9e-110
PDEIFNDL_00813 2.2e-210 S Short C-terminal domain
PDEIFNDL_00814 4.3e-61 S Protein of unknown function (DUF4230)
PDEIFNDL_00816 3.6e-33
PDEIFNDL_00817 4.2e-38
PDEIFNDL_00818 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
PDEIFNDL_00819 4.3e-138 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PDEIFNDL_00820 3.3e-228 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PDEIFNDL_00821 6.5e-226 M Glycosyl transferase 4-like domain
PDEIFNDL_00822 1.1e-197 ltaE 4.1.2.48 E Beta-eliminating lyase
PDEIFNDL_00824 8.1e-188 yocS S SBF-like CPA transporter family (DUF4137)
PDEIFNDL_00825 1.2e-61 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PDEIFNDL_00826 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PDEIFNDL_00827 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PDEIFNDL_00828 9.5e-233 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PDEIFNDL_00829 2e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PDEIFNDL_00830 1.8e-75 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PDEIFNDL_00831 1.1e-239 carA 6.3.5.5 F Belongs to the CarA family
PDEIFNDL_00832 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
PDEIFNDL_00833 3.7e-171 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PDEIFNDL_00834 1.2e-106 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PDEIFNDL_00835 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
PDEIFNDL_00836 1.4e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PDEIFNDL_00837 4.2e-228 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PDEIFNDL_00838 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PDEIFNDL_00839 2.7e-134 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PDEIFNDL_00840 1.1e-178 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PDEIFNDL_00841 3.5e-123 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
PDEIFNDL_00842 4.4e-283 arc O AAA ATPase forming ring-shaped complexes
PDEIFNDL_00843 1e-301 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
PDEIFNDL_00844 3.3e-160 hisN 3.1.3.25 G Inositol monophosphatase family
PDEIFNDL_00845 1.4e-24 pup S Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation
PDEIFNDL_00846 2.6e-280 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
PDEIFNDL_00847 9.7e-141 C FMN binding
PDEIFNDL_00848 3.9e-57
PDEIFNDL_00849 1.4e-41 hup L Belongs to the bacterial histone-like protein family
PDEIFNDL_00850 0.0 S Lysylphosphatidylglycerol synthase TM region
PDEIFNDL_00851 1.6e-279 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
PDEIFNDL_00852 1e-276 S PGAP1-like protein
PDEIFNDL_00853 5.3e-67
PDEIFNDL_00854 7.2e-181 S von Willebrand factor (vWF) type A domain
PDEIFNDL_00855 6.1e-191 S von Willebrand factor (vWF) type A domain
PDEIFNDL_00856 3.6e-91
PDEIFNDL_00857 3.6e-174 S Protein of unknown function DUF58
PDEIFNDL_00858 4e-182 moxR S ATPase family associated with various cellular activities (AAA)
PDEIFNDL_00859 4.4e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PDEIFNDL_00860 8.5e-77 S LytR cell envelope-related transcriptional attenuator
PDEIFNDL_00861 8.7e-290 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PDEIFNDL_00863 8.6e-124
PDEIFNDL_00864 2.6e-132 KT Response regulator receiver domain protein
PDEIFNDL_00865 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDEIFNDL_00866 4.5e-67 cspB K 'Cold-shock' DNA-binding domain
PDEIFNDL_00867 1.2e-182 S Protein of unknown function (DUF3027)
PDEIFNDL_00868 4.6e-188 uspA T Belongs to the universal stress protein A family
PDEIFNDL_00869 0.0 clpC O ATPase family associated with various cellular activities (AAA)
PDEIFNDL_00870 6.3e-254 codA 3.5.4.1, 3.5.4.21 F Amidohydrolase family
PDEIFNDL_00871 3.4e-283 purR QT Purine catabolism regulatory protein-like family
PDEIFNDL_00872 2.5e-245 proP EGP Sugar (and other) transporter
PDEIFNDL_00873 1.6e-140 3.5.2.10 S Creatinine amidohydrolase
PDEIFNDL_00874 1.5e-216 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
PDEIFNDL_00875 2e-250 hisS 6.1.1.21 J Histidyl-tRNA synthetase
PDEIFNDL_00876 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PDEIFNDL_00877 7.1e-281 glnP E Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00878 6.7e-139 glnQ 3.6.3.21 E ATPases associated with a variety of cellular activities
PDEIFNDL_00879 6.2e-137 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
PDEIFNDL_00880 2.6e-152 gluB ET Belongs to the bacterial solute-binding protein 3 family
PDEIFNDL_00881 1.8e-111 gluC E Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00882 1e-199 gluD E Binding-protein-dependent transport system inner membrane component
PDEIFNDL_00883 4.3e-191 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
PDEIFNDL_00884 0.0 L DEAD DEAH box helicase
PDEIFNDL_00885 4.7e-252 rarA L Recombination factor protein RarA
PDEIFNDL_00886 2.8e-133 KT Transcriptional regulatory protein, C terminal
PDEIFNDL_00887 4.4e-286 mtrB 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PDEIFNDL_00888 0.0 lpqB S Lipoprotein LpqB beta-propeller domain
PDEIFNDL_00889 2.4e-165 G Periplasmic binding protein domain
PDEIFNDL_00890 6e-288 ytfR 3.6.3.17 G ATPases associated with a variety of cellular activities
PDEIFNDL_00891 1.5e-181 ytfT U Branched-chain amino acid transport system / permease component
PDEIFNDL_00892 1.2e-172 yjfF U Branched-chain amino acid transport system / permease component
PDEIFNDL_00893 5.3e-252 EGP Major facilitator Superfamily
PDEIFNDL_00894 0.0 E ABC transporter, substrate-binding protein, family 5
PDEIFNDL_00895 1e-113 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PDEIFNDL_00896 8.6e-125 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PDEIFNDL_00897 6.1e-241 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PDEIFNDL_00900 3.9e-246 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
PDEIFNDL_00901 4.8e-117 safC S O-methyltransferase
PDEIFNDL_00902 7.5e-177 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
PDEIFNDL_00903 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
PDEIFNDL_00904 2.7e-255 dprA 5.99.1.2 LU DNA recombination-mediator protein A
PDEIFNDL_00905 2.3e-292 comM O Magnesium chelatase, subunit ChlI C-terminal
PDEIFNDL_00906 3.1e-83 yraN L Belongs to the UPF0102 family
PDEIFNDL_00907 5.6e-166 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PDEIFNDL_00908 2.9e-251 metY 2.5.1.49 E Aminotransferase class-V
PDEIFNDL_00909 4.3e-95 XK27_01265 S ECF-type riboflavin transporter, S component
PDEIFNDL_00910 5.1e-306 3.6.3.24 P AAA domain, putative AbiEii toxin, Type IV TA system
PDEIFNDL_00911 1.7e-148 P Cobalt transport protein
PDEIFNDL_00912 9.1e-192 K helix_turn_helix ASNC type
PDEIFNDL_00913 5.1e-142 V ABC transporter, ATP-binding protein
PDEIFNDL_00914 0.0 MV MacB-like periplasmic core domain
PDEIFNDL_00915 4.4e-127 K helix_turn_helix, Lux Regulon
PDEIFNDL_00916 0.0 tcsS2 T Histidine kinase
PDEIFNDL_00917 9.9e-271 pip 3.4.11.5 S alpha/beta hydrolase fold
PDEIFNDL_00918 1.4e-142 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PDEIFNDL_00919 3.9e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PDEIFNDL_00920 1.4e-08 yccF S Inner membrane component domain
PDEIFNDL_00921 5.9e-12
PDEIFNDL_00922 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
PDEIFNDL_00923 7e-85 feoB P transporter of a GTP-driven Fe(2 ) uptake system
PDEIFNDL_00924 1e-94
PDEIFNDL_00925 5.5e-165 MA20_14895 S Conserved hypothetical protein 698
PDEIFNDL_00926 6.2e-185 C Na H antiporter family protein
PDEIFNDL_00927 7.7e-158 korD 1.2.7.3 C Domain of unknown function (DUF362)
PDEIFNDL_00928 4.9e-79 2.7.1.48 F uridine kinase
PDEIFNDL_00929 8.5e-70 S ECF transporter, substrate-specific component
PDEIFNDL_00930 8.9e-137 S Sulfite exporter TauE/SafE
PDEIFNDL_00931 7e-141 K helix_turn_helix, arabinose operon control protein
PDEIFNDL_00932 5.4e-155 3.1.3.73 G Phosphoglycerate mutase family
PDEIFNDL_00933 1.9e-234 rutG F Permease family
PDEIFNDL_00934 1.4e-127 S Enoyl-(Acyl carrier protein) reductase
PDEIFNDL_00935 1.2e-270 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
PDEIFNDL_00936 1.9e-133 ybbM V Uncharacterised protein family (UPF0014)
PDEIFNDL_00937 5.4e-142 ybbL V ATPases associated with a variety of cellular activities
PDEIFNDL_00938 1.3e-241 S Putative esterase
PDEIFNDL_00939 0.0 lysX S Uncharacterised conserved protein (DUF2156)
PDEIFNDL_00940 1.2e-277 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PDEIFNDL_00941 5.3e-147 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PDEIFNDL_00942 1.9e-219 patB 4.4.1.8 E Aminotransferase, class I II
PDEIFNDL_00943 3.6e-304 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PDEIFNDL_00944 2.6e-180 opcA G Glucose-6-phosphate dehydrogenase subunit
PDEIFNDL_00945 9e-147 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
PDEIFNDL_00946 1.6e-82 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PDEIFNDL_00947 1.3e-87 M Protein of unknown function (DUF3737)
PDEIFNDL_00948 1.1e-141 azlC E AzlC protein
PDEIFNDL_00949 3.2e-53 azlD E Branched-chain amino acid transport protein (AzlD)
PDEIFNDL_00950 0.0 cstA T 5TM C-terminal transporter carbon starvation CstA
PDEIFNDL_00951 6.2e-40 ybdD S Selenoprotein, putative
PDEIFNDL_00952 1.1e-176 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
PDEIFNDL_00953 0.0 S Uncharacterised protein family (UPF0182)
PDEIFNDL_00954 2.2e-93 2.3.1.183 M Acetyltransferase (GNAT) domain
PDEIFNDL_00955 3.8e-113 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PDEIFNDL_00956 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PDEIFNDL_00957 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PDEIFNDL_00958 2.6e-71 divIC D Septum formation initiator
PDEIFNDL_00959 7.5e-103 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
PDEIFNDL_00960 1.3e-182 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
PDEIFNDL_00962 9.5e-71 P Major Facilitator Superfamily
PDEIFNDL_00963 3.5e-92
PDEIFNDL_00964 9.4e-283 sdaA 4.3.1.17 E Serine dehydratase alpha chain
PDEIFNDL_00965 1.2e-73 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
PDEIFNDL_00966 2.6e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDEIFNDL_00967 2.3e-143 yplQ S Haemolysin-III related
PDEIFNDL_00968 6e-277 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDEIFNDL_00969 1.9e-46 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
PDEIFNDL_00970 0.0 D FtsK/SpoIIIE family
PDEIFNDL_00971 1.8e-170 K Cell envelope-related transcriptional attenuator domain
PDEIFNDL_00973 5.7e-208 K Cell envelope-related transcriptional attenuator domain
PDEIFNDL_00974 3.4e-54 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
PDEIFNDL_00975 0.0 S Glycosyl transferase, family 2
PDEIFNDL_00976 8.7e-223
PDEIFNDL_00977 1.5e-71 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
PDEIFNDL_00978 7.2e-152 cof 5.2.1.8 T Eukaryotic phosphomannomutase
PDEIFNDL_00979 8.5e-139 ctsW S Phosphoribosyl transferase domain
PDEIFNDL_00980 6.8e-188 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PDEIFNDL_00981 2e-129 T Response regulator receiver domain protein
PDEIFNDL_00982 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PDEIFNDL_00983 3e-102 carD K CarD-like/TRCF domain
PDEIFNDL_00984 1.7e-87 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PDEIFNDL_00985 3.9e-140 znuB U ABC 3 transport family
PDEIFNDL_00986 2e-160 znuC P ATPases associated with a variety of cellular activities
PDEIFNDL_00987 5e-172 P Zinc-uptake complex component A periplasmic
PDEIFNDL_00988 5.4e-161 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PDEIFNDL_00989 8.3e-255 rpsA J Ribosomal protein S1
PDEIFNDL_00990 3.4e-115 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PDEIFNDL_00991 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PDEIFNDL_00992 5.4e-14 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PDEIFNDL_00993 2.8e-157 terC P Integral membrane protein, TerC family
PDEIFNDL_00994 2.3e-273 pyk 2.7.1.40 G Pyruvate kinase
PDEIFNDL_00996 1e-70 topB 5.99.1.2 L DNA topoisomerase
PDEIFNDL_00997 1.8e-15
PDEIFNDL_01000 1.9e-92 KL Type III restriction enzyme res subunit
PDEIFNDL_01001 3.6e-165 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
PDEIFNDL_01002 8e-100 pdtaR T Response regulator receiver domain protein
PDEIFNDL_01003 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PDEIFNDL_01004 2.9e-173 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
PDEIFNDL_01005 1.5e-123 3.6.1.13 L NUDIX domain
PDEIFNDL_01006 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
PDEIFNDL_01007 1.4e-212 ykiI
PDEIFNDL_01009 9.6e-250 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PDEIFNDL_01010 1.7e-70 yvbK 3.1.3.25 K Acetyltransferase (GNAT) domain
PDEIFNDL_01011 5.8e-76 yiaC K Acetyltransferase (GNAT) domain
PDEIFNDL_01012 1.5e-302 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PDEIFNDL_01013 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
PDEIFNDL_01014 3.9e-301 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PDEIFNDL_01015 1.7e-232 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDEIFNDL_01016 0.0 yrhL I Psort location CytoplasmicMembrane, score 9.99
PDEIFNDL_01017 2.8e-244 pbuX F Permease family
PDEIFNDL_01018 1.5e-106 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PDEIFNDL_01019 0.0 pcrA 3.6.4.12 L DNA helicase
PDEIFNDL_01020 1.7e-61 S Domain of unknown function (DUF4418)
PDEIFNDL_01021 4.8e-216 V FtsX-like permease family
PDEIFNDL_01022 9.2e-150 lolD V ABC transporter
PDEIFNDL_01023 3.1e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PDEIFNDL_01024 8.5e-50 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
PDEIFNDL_01025 5.6e-129 pgm3 G Phosphoglycerate mutase family
PDEIFNDL_01026 3.4e-59 WQ51_05790 S Bacterial protein of unknown function (DUF948)
PDEIFNDL_01027 2.5e-36
PDEIFNDL_01028 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PDEIFNDL_01029 2.7e-82 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PDEIFNDL_01030 8.9e-191 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PDEIFNDL_01031 9.3e-57 3.4.23.43 S Type IV leader peptidase family
PDEIFNDL_01032 1.3e-221 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PDEIFNDL_01033 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PDEIFNDL_01034 4.9e-81 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
PDEIFNDL_01035 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 M Aamy_C
PDEIFNDL_01036 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PDEIFNDL_01037 0.0 S L,D-transpeptidase catalytic domain
PDEIFNDL_01038 1.6e-290 sufB O FeS assembly protein SufB
PDEIFNDL_01039 6.1e-235 sufD O FeS assembly protein SufD
PDEIFNDL_01040 1e-142 sufC O FeS assembly ATPase SufC
PDEIFNDL_01041 5.5e-239 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PDEIFNDL_01042 3.4e-100 iscU C SUF system FeS assembly protein, NifU family
PDEIFNDL_01043 2.7e-108 yitW S Iron-sulfur cluster assembly protein
PDEIFNDL_01044 8.1e-243 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PDEIFNDL_01045 3.5e-163 spoU 2.1.1.185 J SpoU rRNA Methylase family
PDEIFNDL_01047 2e-138 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PDEIFNDL_01048 1.8e-56 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
PDEIFNDL_01049 5.9e-208 phoH T PhoH-like protein
PDEIFNDL_01050 9.4e-103 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PDEIFNDL_01051 1.1e-251 corC S CBS domain
PDEIFNDL_01052 1.3e-179 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PDEIFNDL_01053 0.0 fadD 6.2.1.3 I AMP-binding enzyme
PDEIFNDL_01054 1.7e-202 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
PDEIFNDL_01055 2.1e-43 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
PDEIFNDL_01056 3.5e-258 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
PDEIFNDL_01057 7.2e-269 S Psort location Cytoplasmic, score 8.87
PDEIFNDL_01059 7.3e-223 G Transmembrane secretion effector
PDEIFNDL_01060 7e-121 K Bacterial regulatory proteins, tetR family
PDEIFNDL_01062 1.1e-39 nrdH O Glutaredoxin
PDEIFNDL_01063 3e-75 nrdI F Probably involved in ribonucleotide reductase function
PDEIFNDL_01064 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDEIFNDL_01066 3.1e-189 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDEIFNDL_01067 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
PDEIFNDL_01068 2.6e-30 EGP Major facilitator Superfamily
PDEIFNDL_01069 1.3e-25 yhjX EGP Major facilitator Superfamily
PDEIFNDL_01070 3.8e-195 S alpha beta
PDEIFNDL_01071 1e-89 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PDEIFNDL_01072 4.1e-92 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDEIFNDL_01073 3.2e-54 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDEIFNDL_01074 9.1e-74 K Acetyltransferase (GNAT) domain
PDEIFNDL_01076 1.9e-227 ilvE 2.6.1.42 E Amino-transferase class IV
PDEIFNDL_01077 1.1e-133 S UPF0126 domain
PDEIFNDL_01078 2.9e-33 rpsT J Binds directly to 16S ribosomal RNA
PDEIFNDL_01079 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PDEIFNDL_01080 1.5e-233 hemN H Involved in the biosynthesis of porphyrin-containing compound
PDEIFNDL_01081 5e-145 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
PDEIFNDL_01082 1.3e-287 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
PDEIFNDL_01083 8.1e-218 luxE 6.2.1.19 H long-chain-fatty-acid--luciferin-component ligase, acyl-protein synthase
PDEIFNDL_01084 1.3e-233 F Psort location CytoplasmicMembrane, score 10.00
PDEIFNDL_01085 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
PDEIFNDL_01086 2.6e-307 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
PDEIFNDL_01087 2e-74
PDEIFNDL_01088 7.6e-249 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
PDEIFNDL_01089 1.9e-158 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
PDEIFNDL_01090 1.5e-197 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
PDEIFNDL_01091 4.5e-100 sixA 3.6.1.55 T Phosphoglycerate mutase family
PDEIFNDL_01092 1.8e-239 int L Phage integrase, N-terminal SAM-like domain
PDEIFNDL_01093 9.7e-64
PDEIFNDL_01094 6.5e-24
PDEIFNDL_01095 6.3e-67 rlfA S Protein of unknown function (DUF3800)
PDEIFNDL_01096 4e-66
PDEIFNDL_01097 3.5e-33
PDEIFNDL_01101 2.1e-111 K BRO family, N-terminal domain
PDEIFNDL_01103 8.5e-37
PDEIFNDL_01107 1.5e-33
PDEIFNDL_01109 1.4e-79 ssb1 L Single-strand binding protein family
PDEIFNDL_01110 3.4e-81 K Transcriptional regulator
PDEIFNDL_01111 1.2e-25
PDEIFNDL_01112 2e-78 V HNH endonuclease
PDEIFNDL_01113 8.4e-102 A 3'-to-5' exoribonuclease specific for small oligoribonucleotides
PDEIFNDL_01116 1.7e-12
PDEIFNDL_01118 2.9e-16
PDEIFNDL_01119 4.7e-165 J tRNA 5'-leader removal
PDEIFNDL_01120 6.6e-51 V HNH nucleases
PDEIFNDL_01121 1.1e-58
PDEIFNDL_01122 1.3e-265 S Terminase
PDEIFNDL_01123 1.8e-244 S Phage portal protein, SPP1 Gp6-like
PDEIFNDL_01124 2.8e-113
PDEIFNDL_01126 2.6e-70
PDEIFNDL_01127 3.2e-153 V Phage capsid family
PDEIFNDL_01129 2.4e-63 S Phage protein Gp19/Gp15/Gp42
PDEIFNDL_01130 1.5e-47
PDEIFNDL_01131 4.7e-35
PDEIFNDL_01132 3.8e-61
PDEIFNDL_01133 4.5e-109
PDEIFNDL_01134 8.6e-63
PDEIFNDL_01136 5.1e-189 S phage tail tape measure protein
PDEIFNDL_01137 5.3e-142
PDEIFNDL_01138 3.1e-302 S Psort location Cytoplasmic, score
PDEIFNDL_01140 6.9e-84
PDEIFNDL_01141 7.5e-24
PDEIFNDL_01142 7.2e-45
PDEIFNDL_01143 6.2e-93 L DNA integration
PDEIFNDL_01144 3.7e-19
PDEIFNDL_01145 2.2e-48 MU outer membrane autotransporter barrel domain protein
PDEIFNDL_01149 1.9e-199 M Glycosyl hydrolases family 25
PDEIFNDL_01150 6.8e-29 S Putative phage holin Dp-1
PDEIFNDL_01151 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PDEIFNDL_01152 6.2e-154 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
PDEIFNDL_01153 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
PDEIFNDL_01154 3.9e-187 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PDEIFNDL_01155 4.2e-74 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
PDEIFNDL_01156 4.5e-274 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PDEIFNDL_01157 2.9e-171 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
PDEIFNDL_01158 1.5e-149 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
PDEIFNDL_01159 8.2e-179 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PDEIFNDL_01160 1.8e-122 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PDEIFNDL_01161 1.4e-161 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
PDEIFNDL_01162 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PDEIFNDL_01163 1.1e-108 J Acetyltransferase (GNAT) domain
PDEIFNDL_01164 6.1e-69 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PDEIFNDL_01165 9.6e-219 yxjG_1 E Psort location Cytoplasmic, score 8.87
PDEIFNDL_01166 6.1e-122 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PDEIFNDL_01167 1.8e-50 sdpR K helix_turn_helix, Arsenical Resistance Operon Repressor
PDEIFNDL_01168 2.3e-139 S SdpI/YhfL protein family
PDEIFNDL_01169 2.1e-109 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PDEIFNDL_01170 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PDEIFNDL_01171 5e-125 XK27_06785 V ABC transporter
PDEIFNDL_01174 1.6e-61
PDEIFNDL_01175 3.3e-96 M Peptidase family M23
PDEIFNDL_01176 0.0 fadD1 6.2.1.3 I AMP-binding enzyme
PDEIFNDL_01177 1.1e-268 G ABC transporter substrate-binding protein
PDEIFNDL_01178 5.3e-231 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
PDEIFNDL_01179 1.1e-209 guaB 1.1.1.205 F IMP dehydrogenase family protein
PDEIFNDL_01180 6.1e-108 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
PDEIFNDL_01181 9e-72 U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PDEIFNDL_01182 2.9e-241 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PDEIFNDL_01183 3.6e-67 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PDEIFNDL_01184 2.5e-143 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PDEIFNDL_01185 1.5e-115
PDEIFNDL_01187 1.3e-232 XK27_00240 K Fic/DOC family
PDEIFNDL_01188 2.7e-70 pdxH S Pfam:Pyridox_oxidase
PDEIFNDL_01189 2.7e-302 M domain protein
PDEIFNDL_01190 5.6e-83 3.4.22.70 M Sortase family
PDEIFNDL_01191 5.2e-65 3.4.22.70 M Sortase family
PDEIFNDL_01192 2.5e-163 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PDEIFNDL_01193 5.7e-172 corA P CorA-like Mg2+ transporter protein
PDEIFNDL_01194 1.5e-142 ET Bacterial periplasmic substrate-binding proteins
PDEIFNDL_01195 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDEIFNDL_01196 1.3e-92 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
PDEIFNDL_01197 0.0 comE S Competence protein
PDEIFNDL_01198 6.5e-179 holA 2.7.7.7 L DNA polymerase III delta subunit
PDEIFNDL_01199 9.2e-94 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
PDEIFNDL_01200 1.3e-148 yeaZ 2.3.1.234 O Glycoprotease family
PDEIFNDL_01201 2.6e-103 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
PDEIFNDL_01202 3.1e-195 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PDEIFNDL_01204 2.6e-119 yoaP E YoaP-like
PDEIFNDL_01205 4.5e-185 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PDEIFNDL_01206 5.3e-119 ykoE S ABC-type cobalt transport system, permease component
PDEIFNDL_01207 6.7e-72 K MerR family regulatory protein
PDEIFNDL_01208 4.6e-199 adhB 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
PDEIFNDL_01209 2e-143 4.1.1.44 S Carboxymuconolactone decarboxylase family
PDEIFNDL_01210 2.7e-221 yxjG_1 E Psort location Cytoplasmic, score 8.87
PDEIFNDL_01211 1.9e-71 S Psort location CytoplasmicMembrane, score
PDEIFNDL_01212 1e-182 cat P Cation efflux family
PDEIFNDL_01215 1.4e-111
PDEIFNDL_01216 9.2e-151
PDEIFNDL_01217 3.4e-146 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
PDEIFNDL_01218 6.1e-279 pepC 3.4.22.40 E Peptidase C1-like family
PDEIFNDL_01219 1.4e-157 S IMP dehydrogenase activity
PDEIFNDL_01220 1.9e-300 ybiT S ABC transporter
PDEIFNDL_01221 4.7e-111 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
PDEIFNDL_01222 2.8e-66 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PDEIFNDL_01224 2e-13
PDEIFNDL_01225 5.8e-273 S Psort location Cytoplasmic, score 8.87
PDEIFNDL_01226 9.5e-141 S Domain of unknown function (DUF4194)
PDEIFNDL_01227 0.0 S Psort location Cytoplasmic, score 8.87
PDEIFNDL_01228 6e-219 S Psort location Cytoplasmic, score 8.87
PDEIFNDL_01229 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PDEIFNDL_01230 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PDEIFNDL_01231 6e-182 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
PDEIFNDL_01232 1.1e-170 rapZ S Displays ATPase and GTPase activities
PDEIFNDL_01233 1.3e-171 whiA K May be required for sporulation
PDEIFNDL_01234 1.9e-220 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
PDEIFNDL_01235 9.6e-149 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PDEIFNDL_01236 2.4e-32 secG U Preprotein translocase SecG subunit
PDEIFNDL_01237 3.3e-163 S Sucrose-6F-phosphate phosphohydrolase
PDEIFNDL_01238 1.2e-299 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
PDEIFNDL_01239 1.2e-08 pnuC H Nicotinamide mononucleotide transporter
PDEIFNDL_01240 5.6e-112 pnuC H Nicotinamide mononucleotide transporter
PDEIFNDL_01241 2.5e-49 nadD 2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55 H ATPase kinase involved in NAD metabolism
PDEIFNDL_01242 2.2e-41 nadR H ATPase kinase involved in NAD metabolism
PDEIFNDL_01243 4.2e-203 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PDEIFNDL_01244 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
PDEIFNDL_01245 1e-196 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PDEIFNDL_01246 2.4e-188 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PDEIFNDL_01247 5.1e-158 G Fructosamine kinase
PDEIFNDL_01248 6.9e-156 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PDEIFNDL_01249 1.6e-156 S PAC2 family
PDEIFNDL_01254 9.4e-36
PDEIFNDL_01255 4.7e-76 garA T Inner membrane component of T3SS, cytoplasmic domain
PDEIFNDL_01256 9.7e-112 K helix_turn_helix, mercury resistance
PDEIFNDL_01257 4.6e-61
PDEIFNDL_01258 2e-140 pgp 3.1.3.18 S HAD-hyrolase-like
PDEIFNDL_01259 3.9e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
PDEIFNDL_01260 0.0 helY L DEAD DEAH box helicase
PDEIFNDL_01261 2.1e-54
PDEIFNDL_01262 0.0 pafB K WYL domain
PDEIFNDL_01263 1.4e-264 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
PDEIFNDL_01265 1.1e-69
PDEIFNDL_01266 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
PDEIFNDL_01267 9.1e-144 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PDEIFNDL_01268 5.8e-161 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PDEIFNDL_01269 8.2e-34
PDEIFNDL_01270 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PDEIFNDL_01271 3e-246
PDEIFNDL_01272 2.6e-161 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PDEIFNDL_01273 2.2e-221 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PDEIFNDL_01274 1.8e-99 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PDEIFNDL_01275 9.7e-49 yajC U Preprotein translocase subunit
PDEIFNDL_01276 4.7e-199 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PDEIFNDL_01277 1e-105 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PDEIFNDL_01278 1e-99 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PDEIFNDL_01279 5.2e-128 yebC K transcriptional regulatory protein
PDEIFNDL_01280 3.5e-112 pgsA1 2.7.8.11, 2.7.8.5 I CDP-alcohol phosphatidyltransferase
PDEIFNDL_01281 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PDEIFNDL_01282 1.7e-140 S Bacterial protein of unknown function (DUF881)
PDEIFNDL_01283 7.1e-45 sbp S Protein of unknown function (DUF1290)
PDEIFNDL_01284 1.7e-171 S Bacterial protein of unknown function (DUF881)
PDEIFNDL_01285 1.4e-102 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PDEIFNDL_01286 3.3e-155 hisG 2.4.2.17 F ATP phosphoribosyltransferase
PDEIFNDL_01287 1.9e-40 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
PDEIFNDL_01288 1.2e-96 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
PDEIFNDL_01289 4.6e-180 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PDEIFNDL_01290 1e-162 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PDEIFNDL_01291 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PDEIFNDL_01292 7.1e-297 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PDEIFNDL_01293 2.9e-72 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PDEIFNDL_01294 3e-139 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PDEIFNDL_01295 3.2e-225 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PDEIFNDL_01296 6.1e-177 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
PDEIFNDL_01297 1.7e-91 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PDEIFNDL_01298 2.6e-135 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PDEIFNDL_01300 5e-143 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PDEIFNDL_01301 1.9e-139 rpsB J Belongs to the universal ribosomal protein uS2 family
PDEIFNDL_01302 1.1e-83 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PDEIFNDL_01303 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
PDEIFNDL_01304 1.8e-121
PDEIFNDL_01306 5e-190 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDEIFNDL_01307 1.8e-141 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PDEIFNDL_01308 3.2e-101
PDEIFNDL_01309 2.9e-243 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PDEIFNDL_01310 6.5e-251 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PDEIFNDL_01311 2.3e-284 thrC 4.2.3.1 E Threonine synthase N terminus
PDEIFNDL_01312 1e-232 EGP Major facilitator Superfamily
PDEIFNDL_01313 1e-107 3.1.3.27 E haloacid dehalogenase-like hydrolase
PDEIFNDL_01314 7.4e-174 G Fic/DOC family
PDEIFNDL_01315 3.8e-144
PDEIFNDL_01316 6.9e-164 IQ Enoyl-(Acyl carrier protein) reductase
PDEIFNDL_01317 5.3e-167 S Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PDEIFNDL_01318 7.4e-77 3.4.13.22 S Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PDEIFNDL_01320 9.5e-92 bcp 1.11.1.15 O Redoxin
PDEIFNDL_01321 1.7e-21 S Psort location Cytoplasmic, score 8.87
PDEIFNDL_01322 1.1e-95 S Pyridoxamine 5'-phosphate oxidase
PDEIFNDL_01323 0.0 S Histidine phosphatase superfamily (branch 2)
PDEIFNDL_01324 6e-44 L transposition
PDEIFNDL_01325 1.1e-23 C Acetamidase/Formamidase family
PDEIFNDL_01326 1.7e-58 K helix_turn_helix gluconate operon transcriptional repressor
PDEIFNDL_01327 2.3e-173 V ATPases associated with a variety of cellular activities
PDEIFNDL_01328 4.4e-116 S ABC-2 family transporter protein
PDEIFNDL_01329 2.4e-121 S Haloacid dehalogenase-like hydrolase
PDEIFNDL_01330 3.7e-262 recN L May be involved in recombinational repair of damaged DNA
PDEIFNDL_01331 2e-177 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PDEIFNDL_01332 2.1e-266 trkB P Cation transport protein
PDEIFNDL_01333 3e-116 trkA P TrkA-N domain
PDEIFNDL_01334 2.9e-134 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PDEIFNDL_01335 1.1e-192 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
PDEIFNDL_01336 9.6e-141 L Tetratricopeptide repeat
PDEIFNDL_01337 1.3e-251 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PDEIFNDL_01338 0.0 S Protein of unknown function (DUF975)
PDEIFNDL_01339 8.6e-137 S Putative ABC-transporter type IV
PDEIFNDL_01340 9.7e-94 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
PDEIFNDL_01341 1.3e-279 argH 4.3.2.1 E argininosuccinate lyase
PDEIFNDL_01342 4.6e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PDEIFNDL_01343 2.3e-82 argR K Regulates arginine biosynthesis genes
PDEIFNDL_01344 1e-184 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PDEIFNDL_01345 6.4e-243 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
PDEIFNDL_01346 1.8e-178 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
PDEIFNDL_01347 8.8e-215 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PDEIFNDL_01348 2.2e-204 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PDEIFNDL_01349 1.9e-98
PDEIFNDL_01350 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
PDEIFNDL_01351 2.4e-203 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PDEIFNDL_01352 3.3e-158 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDEIFNDL_01353 1.5e-97 yvdD 3.2.2.10 S Possible lysine decarboxylase
PDEIFNDL_01354 4.5e-18
PDEIFNDL_01356 1.5e-17 L HNH endonuclease
PDEIFNDL_01357 2.2e-113 ung2 3.2.2.27 L Uracil DNA glycosylase superfamily
PDEIFNDL_01358 4e-42 V DNA modification
PDEIFNDL_01359 7.8e-282 glnA 6.3.1.2 E glutamine synthetase
PDEIFNDL_01360 6e-143 S Domain of unknown function (DUF4191)
PDEIFNDL_01361 8.4e-247 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PDEIFNDL_01362 3.6e-93 S Protein of unknown function (DUF3043)
PDEIFNDL_01363 1e-251 argE E Peptidase dimerisation domain
PDEIFNDL_01364 3.1e-145 cbiQ P Cobalt transport protein
PDEIFNDL_01365 1.2e-264 ykoD P ATPases associated with a variety of cellular activities
PDEIFNDL_01366 2.9e-84 ykoE S ABC-type cobalt transport system, permease component
PDEIFNDL_01367 2.6e-211 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PDEIFNDL_01368 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PDEIFNDL_01369 0.0 S Tetratricopeptide repeat
PDEIFNDL_01370 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PDEIFNDL_01371 1.8e-306 2.8.2.22 S Arylsulfotransferase Ig-like domain
PDEIFNDL_01372 1.9e-144 bioM P ATPases associated with a variety of cellular activities
PDEIFNDL_01373 6e-216 E Aminotransferase class I and II
PDEIFNDL_01374 9.3e-141 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
PDEIFNDL_01375 1.3e-198 S Glycosyltransferase, group 2 family protein
PDEIFNDL_01377 1.6e-145 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PDEIFNDL_01378 2.4e-47 yhbY J CRS1_YhbY
PDEIFNDL_01379 0.0 ecfA GP ABC transporter, ATP-binding protein
PDEIFNDL_01380 4.3e-107 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PDEIFNDL_01381 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
PDEIFNDL_01382 1.3e-39 pepC 3.4.22.40 E homocysteine catabolic process
PDEIFNDL_01383 1.3e-113 kcsA U Ion channel
PDEIFNDL_01384 1.1e-186 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PDEIFNDL_01385 7.8e-85 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PDEIFNDL_01386 1.1e-121 3.2.1.8 S alpha beta
PDEIFNDL_01387 5.5e-29
PDEIFNDL_01388 1.5e-186 mcrB L Restriction endonuclease
PDEIFNDL_01389 6.7e-31 S KAP family P-loop domain
PDEIFNDL_01390 0.0 L helicase
PDEIFNDL_01391 1e-120 S Domain of unknown function (DUF4391)
PDEIFNDL_01392 2e-230 2.1.1.72 L DNA methylase
PDEIFNDL_01393 0.0 res 3.1.21.5 V Type III restriction enzyme, res subunit
PDEIFNDL_01394 1.8e-54 S MTH538 TIR-like domain (DUF1863)
PDEIFNDL_01395 9e-124 XK26_04895
PDEIFNDL_01396 2.5e-82 V Abi-like protein
PDEIFNDL_01397 9.8e-09 XK26_04895
PDEIFNDL_01398 2.8e-68
PDEIFNDL_01399 1e-212
PDEIFNDL_01400 2.7e-148 S phosphoesterase or phosphohydrolase
PDEIFNDL_01401 3.6e-75 4.1.1.44 S Cupin domain
PDEIFNDL_01402 1e-166 C Aldo/keto reductase family
PDEIFNDL_01403 1.4e-49 C Flavodoxin
PDEIFNDL_01405 9e-159 2.7.13.3 T Histidine kinase
PDEIFNDL_01406 5.5e-121 K helix_turn_helix, Lux Regulon
PDEIFNDL_01407 0.0 KLT Lanthionine synthetase C-like protein
PDEIFNDL_01408 4.2e-138 3.6.3.44 V ABC transporter
PDEIFNDL_01409 1.2e-158 msbA2 3.6.3.44 V ABC transporter transmembrane region
PDEIFNDL_01410 3.9e-159 O Thioredoxin
PDEIFNDL_01411 7.6e-129 E Psort location Cytoplasmic, score 8.87
PDEIFNDL_01412 2.7e-132 yebE S DUF218 domain
PDEIFNDL_01413 2e-231 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PDEIFNDL_01414 2e-236 rnd 3.1.13.5 J 3'-5' exonuclease
PDEIFNDL_01415 2.9e-79 S Protein of unknown function (DUF3000)
PDEIFNDL_01416 7.4e-166 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDEIFNDL_01417 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
PDEIFNDL_01418 4.5e-31
PDEIFNDL_01419 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PDEIFNDL_01420 4.1e-225 S Peptidase dimerisation domain
PDEIFNDL_01421 1.7e-156 S Sucrose-6F-phosphate phosphohydrolase
PDEIFNDL_01422 1.6e-146 metQ P NLPA lipoprotein
PDEIFNDL_01423 5.5e-147 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PDEIFNDL_01424 5.4e-108 metI P Binding-protein-dependent transport system inner membrane component
PDEIFNDL_01425 2.6e-73
PDEIFNDL_01427 1.3e-125 V Abi-like protein
PDEIFNDL_01428 1e-30 S Psort location Cytoplasmic, score 8.87
PDEIFNDL_01429 6.8e-128 insK L Integrase core domain
PDEIFNDL_01430 3.1e-67 L Helix-turn-helix domain
PDEIFNDL_01432 0.0 S LPXTG-motif cell wall anchor domain protein
PDEIFNDL_01433 3.7e-236 dinF V MatE
PDEIFNDL_01434 3e-238 L Phage integrase family
PDEIFNDL_01435 3.8e-38 mod 2.1.1.72 L DNA methylase
PDEIFNDL_01436 4.5e-180 S Fic/DOC family
PDEIFNDL_01437 2.2e-65
PDEIFNDL_01438 1e-64
PDEIFNDL_01439 0.0 topB 5.99.1.2 L DNA topoisomerase
PDEIFNDL_01440 3.9e-59
PDEIFNDL_01441 5.3e-31
PDEIFNDL_01443 2.1e-44 S Domain of unknown function (DUF4160)
PDEIFNDL_01444 2.5e-42 K Protein of unknown function (DUF2442)
PDEIFNDL_01445 1.5e-43 S Bacterial mobilisation protein (MobC)
PDEIFNDL_01446 5.8e-249 ltrBE1 U Relaxase/Mobilisation nuclease domain
PDEIFNDL_01447 1.3e-161 S Protein of unknown function (DUF3801)
PDEIFNDL_01448 2.1e-85
PDEIFNDL_01449 9.8e-43
PDEIFNDL_01450 0.0 XK27_00500 KL Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
PDEIFNDL_01451 2.5e-36
PDEIFNDL_01452 1.5e-33
PDEIFNDL_01453 0.0 U Type IV secretory system Conjugative DNA transfer
PDEIFNDL_01454 6e-130
PDEIFNDL_01455 8.4e-96
PDEIFNDL_01456 1.1e-261 isp2 3.2.1.96 M CHAP domain
PDEIFNDL_01457 0.0 trsE U type IV secretory pathway VirB4
PDEIFNDL_01458 8.8e-62 S PrgI family protein
PDEIFNDL_01459 5.3e-145
PDEIFNDL_01460 5.2e-26
PDEIFNDL_01462 0.0 D Cell surface antigen C-terminus
PDEIFNDL_01463 5.4e-58
PDEIFNDL_01465 3.4e-27
PDEIFNDL_01466 1.2e-102 parA D AAA domain
PDEIFNDL_01467 5.4e-89 S Transcription factor WhiB
PDEIFNDL_01468 2.5e-42
PDEIFNDL_01469 2.2e-186 S Helix-turn-helix domain
PDEIFNDL_01470 8e-15
PDEIFNDL_01471 1.3e-27
PDEIFNDL_01472 5.2e-117
PDEIFNDL_01473 8.1e-66
PDEIFNDL_01474 4.8e-151 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PDEIFNDL_01475 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PDEIFNDL_01476 1.3e-84 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
PDEIFNDL_01477 1e-47 S Domain of unknown function (DUF4193)
PDEIFNDL_01478 4.1e-147 S Protein of unknown function (DUF3071)
PDEIFNDL_01479 3e-234 S Type I phosphodiesterase / nucleotide pyrophosphatase
PDEIFNDL_01480 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
PDEIFNDL_01481 0.0 lhr L DEAD DEAH box helicase
PDEIFNDL_01482 5.8e-32 yozG K Cro/C1-type HTH DNA-binding domain
PDEIFNDL_01483 1.6e-78 S Protein of unknown function (DUF2975)
PDEIFNDL_01484 4.8e-241 T PhoQ Sensor
PDEIFNDL_01485 1.5e-222 G Major Facilitator Superfamily
PDEIFNDL_01486 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
PDEIFNDL_01487 9.7e-173 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PDEIFNDL_01488 1.1e-118
PDEIFNDL_01489 1e-196 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
PDEIFNDL_01490 0.0 pknL 2.7.11.1 KLT PASTA
PDEIFNDL_01491 4.3e-132 plsC2 2.3.1.51 I Phosphate acyltransferases
PDEIFNDL_01492 1.1e-96
PDEIFNDL_01493 5.9e-194 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PDEIFNDL_01494 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PDEIFNDL_01495 3.3e-118 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PDEIFNDL_01496 3.5e-123 recX S Modulates RecA activity
PDEIFNDL_01497 5.4e-212 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PDEIFNDL_01498 4.3e-46 S Protein of unknown function (DUF3046)
PDEIFNDL_01499 1.6e-80 K Helix-turn-helix XRE-family like proteins
PDEIFNDL_01500 5.5e-98 cinA 3.5.1.42 S Belongs to the CinA family
PDEIFNDL_01501 4.1e-124 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PDEIFNDL_01502 0.0 ftsK D FtsK SpoIIIE family protein
PDEIFNDL_01503 1.6e-191 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PDEIFNDL_01504 1e-281 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PDEIFNDL_01505 1.1e-155 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
PDEIFNDL_01506 6.2e-177 ydeD EG EamA-like transporter family
PDEIFNDL_01507 1.9e-126 ybhL S Belongs to the BI1 family
PDEIFNDL_01508 6.7e-60 S Domain of unknown function (DUF5067)
PDEIFNDL_01509 5.1e-243 T Histidine kinase
PDEIFNDL_01510 1.8e-127 K helix_turn_helix, Lux Regulon
PDEIFNDL_01511 0.0 S Protein of unknown function DUF262
PDEIFNDL_01512 9.9e-115 K helix_turn_helix, Lux Regulon
PDEIFNDL_01513 1.1e-245 T Histidine kinase
PDEIFNDL_01514 1.7e-190 V ATPases associated with a variety of cellular activities
PDEIFNDL_01515 7.7e-225 V ABC-2 family transporter protein
PDEIFNDL_01516 1.1e-229 V ABC-2 family transporter protein
PDEIFNDL_01517 1.3e-212 rhaR1 K helix_turn_helix, arabinose operon control protein
PDEIFNDL_01518 4.7e-109 maa 2.3.1.18, 2.3.1.79 S Bacterial transferase hexapeptide repeat protein
PDEIFNDL_01519 1.9e-248 VP1224 V Psort location CytoplasmicMembrane, score 9.99
PDEIFNDL_01520 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PDEIFNDL_01521 0.0 ctpE P E1-E2 ATPase
PDEIFNDL_01522 2e-74
PDEIFNDL_01523 2.8e-243 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDEIFNDL_01524 2.4e-133 S Protein of unknown function (DUF3159)
PDEIFNDL_01525 1.7e-151 S Protein of unknown function (DUF3710)
PDEIFNDL_01526 1.4e-172 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
PDEIFNDL_01527 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
PDEIFNDL_01528 1.4e-170 dppC EP N-terminal TM domain of oligopeptide transport permease C
PDEIFNDL_01529 1.6e-155 dppB EP Binding-protein-dependent transport system inner membrane component
PDEIFNDL_01530 0.0 E ABC transporter, substrate-binding protein, family 5
PDEIFNDL_01531 0.0 E ABC transporter, substrate-binding protein, family 5
PDEIFNDL_01532 1.6e-171 xerC D Belongs to the 'phage' integrase family. XerC subfamily
PDEIFNDL_01533 5.2e-08
PDEIFNDL_01534 2.8e-34
PDEIFNDL_01535 8.9e-195 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
PDEIFNDL_01536 1.8e-189 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
PDEIFNDL_01537 1.2e-103
PDEIFNDL_01538 0.0 typA T Elongation factor G C-terminus
PDEIFNDL_01539 1.7e-249 naiP U Sugar (and other) transporter
PDEIFNDL_01540 2.1e-151 nrtR 3.6.1.55 F NUDIX hydrolase
PDEIFNDL_01541 6.8e-153 soj D CobQ CobB MinD ParA nucleotide binding domain protein
PDEIFNDL_01542 7.7e-177 xerD D recombinase XerD
PDEIFNDL_01543 9.6e-62 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PDEIFNDL_01544 2.1e-25 rpmI J Ribosomal protein L35
PDEIFNDL_01545 1.6e-103 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PDEIFNDL_01546 4.9e-110 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
PDEIFNDL_01547 1.8e-198 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PDEIFNDL_01548 7.9e-88 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PDEIFNDL_01549 7.9e-172 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PDEIFNDL_01550 1.6e-187 galM 5.1.3.3 G Aldose 1-epimerase
PDEIFNDL_01551 1.2e-36
PDEIFNDL_01552 1.3e-97 sigH K Belongs to the sigma-70 factor family. ECF subfamily
PDEIFNDL_01553 9e-276 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PDEIFNDL_01554 3.3e-186 V Acetyltransferase (GNAT) domain
PDEIFNDL_01555 1.9e-289 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
PDEIFNDL_01556 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
PDEIFNDL_01557 4.5e-94 3.6.1.55 F NUDIX domain
PDEIFNDL_01558 0.0 P Belongs to the ABC transporter superfamily
PDEIFNDL_01559 4.7e-192 dppC EP Binding-protein-dependent transport system inner membrane component
PDEIFNDL_01560 3.8e-188 dppB EP Binding-protein-dependent transport system inner membrane component
PDEIFNDL_01561 4.7e-307 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
PDEIFNDL_01562 6.6e-218 GK ROK family
PDEIFNDL_01563 4.9e-165 2.7.1.4 G pfkB family carbohydrate kinase
PDEIFNDL_01564 1.7e-219 S Metal-independent alpha-mannosidase (GH125)
PDEIFNDL_01565 1.6e-27
PDEIFNDL_01566 7.1e-247 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
PDEIFNDL_01567 2.7e-141 ftsQ 6.3.2.4 D Cell division protein FtsQ
PDEIFNDL_01568 2.3e-271 murC 6.3.2.8 M Belongs to the MurCDEF family
PDEIFNDL_01569 6.3e-216 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PDEIFNDL_01570 8.1e-203 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
PDEIFNDL_01571 6.2e-255 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PDEIFNDL_01572 8.8e-193 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PDEIFNDL_01573 6.4e-263 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PDEIFNDL_01574 1.1e-153 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PDEIFNDL_01575 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
PDEIFNDL_01576 6.7e-62 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
PDEIFNDL_01577 1.3e-190 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PDEIFNDL_01578 7e-92 mraZ K Belongs to the MraZ family
PDEIFNDL_01579 0.0 L DNA helicase
PDEIFNDL_01580 1.1e-217 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
PDEIFNDL_01581 8.5e-84 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PDEIFNDL_01582 2.3e-53 M Lysin motif
PDEIFNDL_01583 2.2e-131 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PDEIFNDL_01584 1.3e-149 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PDEIFNDL_01585 2.3e-176 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
PDEIFNDL_01586 1.9e-270 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PDEIFNDL_01587 2.9e-113 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
PDEIFNDL_01588 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
PDEIFNDL_01589 8.1e-191
PDEIFNDL_01590 2.7e-155 V N-Acetylmuramoyl-L-alanine amidase
PDEIFNDL_01591 2.9e-88
PDEIFNDL_01592 3.2e-118 ytrE V ATPases associated with a variety of cellular activities
PDEIFNDL_01593 9.5e-220 EGP Major facilitator Superfamily
PDEIFNDL_01594 9e-138 M Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
PDEIFNDL_01595 5.7e-195 S Domain of unknown function (DUF5067)
PDEIFNDL_01596 3.1e-264 glnA2 6.3.1.2 E glutamine synthetase
PDEIFNDL_01597 1.4e-130 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
PDEIFNDL_01598 6.3e-122 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PDEIFNDL_01599 2.8e-121
PDEIFNDL_01600 1.5e-109 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
PDEIFNDL_01601 2.5e-225 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PDEIFNDL_01602 1.2e-258 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PDEIFNDL_01603 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
PDEIFNDL_01604 1.9e-175 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PDEIFNDL_01605 3.3e-87 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PDEIFNDL_01606 1.3e-30 3.1.21.3 V DivIVA protein
PDEIFNDL_01607 6.9e-41 yggT S YGGT family
PDEIFNDL_01608 8.9e-81 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PDEIFNDL_01609 5.6e-220 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PDEIFNDL_01610 1.1e-244 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PDEIFNDL_01611 1.3e-295 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
PDEIFNDL_01612 1e-105 S Pilus assembly protein, PilO
PDEIFNDL_01613 8.1e-166 pilN NU PFAM Fimbrial assembly family protein
PDEIFNDL_01614 3e-190 pilM NU Type IV pilus assembly protein PilM;
PDEIFNDL_01615 9.1e-150 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
PDEIFNDL_01616 0.0
PDEIFNDL_01617 7.3e-231 pilC U Type II secretion system (T2SS), protein F
PDEIFNDL_01618 1.8e-40 pilA NU Prokaryotic N-terminal methylation motif
PDEIFNDL_01619 1.6e-104 S Prokaryotic N-terminal methylation motif
PDEIFNDL_01620 3.2e-136 ppdC NU Prokaryotic N-terminal methylation motif
PDEIFNDL_01621 0.0 pulE NU Type II/IV secretion system protein
PDEIFNDL_01622 0.0 pilT NU Type II/IV secretion system protein
PDEIFNDL_01623 0.0
PDEIFNDL_01624 9.9e-155 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PDEIFNDL_01625 2e-132 thiE 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PDEIFNDL_01626 2.9e-151 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PDEIFNDL_01627 3e-60 S Thiamine-binding protein
PDEIFNDL_01628 3.7e-193 K helix_turn _helix lactose operon repressor
PDEIFNDL_01629 8e-241 lacY P LacY proton/sugar symporter
PDEIFNDL_01630 0.0 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
PDEIFNDL_01631 8.5e-143 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
PDEIFNDL_01632 5.3e-206 P NMT1/THI5 like
PDEIFNDL_01633 2.1e-217 iunH1 3.2.2.1 F nucleoside hydrolase
PDEIFNDL_01634 4e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PDEIFNDL_01635 7.3e-135 recO L Involved in DNA repair and RecF pathway recombination
PDEIFNDL_01636 0.0 I acetylesterase activity
PDEIFNDL_01637 5.6e-225 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PDEIFNDL_01638 1.4e-199 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PDEIFNDL_01639 1.1e-236 2.7.11.1 NU Tfp pilus assembly protein FimV
PDEIFNDL_01641 2.2e-213 L Phage integrase family
PDEIFNDL_01642 2.6e-14
PDEIFNDL_01645 2.9e-09 K sequence-specific DNA binding
PDEIFNDL_01646 2.2e-124 K DNA binding
PDEIFNDL_01647 5.4e-16
PDEIFNDL_01648 4.3e-72 V Ami_2
PDEIFNDL_01655 3.7e-18 MU outer membrane autotransporter barrel domain protein
PDEIFNDL_01656 3e-151 L DNA integration
PDEIFNDL_01657 1.7e-36
PDEIFNDL_01658 6.8e-84
PDEIFNDL_01660 4.3e-233 S Psort location Cytoplasmic, score
PDEIFNDL_01661 1.4e-150
PDEIFNDL_01662 0.0 S Phage-related minor tail protein
PDEIFNDL_01663 2e-08
PDEIFNDL_01664 1.8e-79
PDEIFNDL_01665 9.9e-86
PDEIFNDL_01666 4.1e-66
PDEIFNDL_01667 5.4e-49
PDEIFNDL_01668 6.2e-54
PDEIFNDL_01669 7.9e-33 S Phage protein Gp19/Gp15/Gp42
PDEIFNDL_01672 4e-120
PDEIFNDL_01673 9.9e-20
PDEIFNDL_01674 3.1e-68
PDEIFNDL_01675 1.8e-161 S Phage portal protein, SPP1 Gp6-like
PDEIFNDL_01676 1.1e-260 S Terminase
PDEIFNDL_01677 1.2e-63
PDEIFNDL_01679 1e-88
PDEIFNDL_01680 3.7e-14
PDEIFNDL_01682 2.9e-31 S Protein of unknwon function (DUF3310)
PDEIFNDL_01685 2e-106
PDEIFNDL_01688 1.3e-39
PDEIFNDL_01689 1.1e-73
PDEIFNDL_01690 4.2e-65
PDEIFNDL_01692 9.7e-59 ssb1 L single-stranded DNA-binding protein
PDEIFNDL_01693 1.4e-73 recT L RecT family
PDEIFNDL_01694 1.6e-84 yqaJ L YqaJ-like viral recombinase domain
PDEIFNDL_01699 1.2e-124 K BRO family, N-terminal domain
PDEIFNDL_01700 6.3e-22 T Pentapeptide repeats (8 copies)
PDEIFNDL_01701 2.2e-13
PDEIFNDL_01702 1.3e-24
PDEIFNDL_01705 1.1e-10
PDEIFNDL_01707 4.4e-08
PDEIFNDL_01708 4.2e-45
PDEIFNDL_01709 6.3e-31
PDEIFNDL_01710 2.2e-128
PDEIFNDL_01711 3.7e-87
PDEIFNDL_01712 6.5e-75 S Protein of unknown function (DUF3052)
PDEIFNDL_01713 1.3e-154 lon T Belongs to the peptidase S16 family
PDEIFNDL_01714 3.3e-294 S Zincin-like metallopeptidase
PDEIFNDL_01715 1.8e-281 uvrD2 3.6.4.12 L DNA helicase
PDEIFNDL_01716 9.4e-270 mphA S Aminoglycoside phosphotransferase
PDEIFNDL_01717 3.6e-32 S Protein of unknown function (DUF3107)
PDEIFNDL_01718 1.1e-172 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
PDEIFNDL_01719 1.4e-116 S Vitamin K epoxide reductase
PDEIFNDL_01720 7.8e-171 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
PDEIFNDL_01721 2.2e-145 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PDEIFNDL_01722 3.5e-21 S Patatin-like phospholipase
PDEIFNDL_01723 7.8e-302 E ABC transporter, substrate-binding protein, family 5
PDEIFNDL_01724 3.2e-175 iaaA 3.4.19.5, 3.5.1.1 E Asparaginase
PDEIFNDL_01725 1e-156 S Patatin-like phospholipase
PDEIFNDL_01726 1.9e-186 K LysR substrate binding domain protein
PDEIFNDL_01727 2.1e-240 patB 4.4.1.8 E Aminotransferase, class I II
PDEIFNDL_01728 2.6e-118 S Phospholipase/Carboxylesterase
PDEIFNDL_01729 1.8e-85
PDEIFNDL_01730 2.5e-25 cas2 L CRISPR associated protein Cas2
PDEIFNDL_01731 1.4e-255 cas4 3.1.12.1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PDEIFNDL_01732 1.8e-94
PDEIFNDL_01733 1.1e-216 cas3 L CRISPR-associated helicase Cas3
PDEIFNDL_01734 1e-77
PDEIFNDL_01735 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PDEIFNDL_01736 1e-257 lacS G Psort location CytoplasmicMembrane, score 10.00
PDEIFNDL_01737 2.8e-185 lacR K Transcriptional regulator, LacI family
PDEIFNDL_01738 0.0 V ABC transporter transmembrane region
PDEIFNDL_01739 0.0 V ABC transporter, ATP-binding protein
PDEIFNDL_01740 1.3e-96 K MarR family
PDEIFNDL_01741 0.0 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
PDEIFNDL_01742 1.1e-106 K Bacterial regulatory proteins, tetR family
PDEIFNDL_01743 1.5e-201 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PDEIFNDL_01744 1.9e-181 G Transporter major facilitator family protein
PDEIFNDL_01745 0.0 3.2.1.40 E Bacterial alpha-L-rhamnosidase C-terminal domain
PDEIFNDL_01746 3.7e-214 EGP Major facilitator Superfamily
PDEIFNDL_01747 8.9e-118 K Periplasmic binding protein domain
PDEIFNDL_01748 4.3e-14 K helix_turn_helix, mercury resistance
PDEIFNDL_01749 1e-220 lmrB U Major Facilitator Superfamily
PDEIFNDL_01750 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
PDEIFNDL_01751 2.3e-108 K Bacterial regulatory proteins, tetR family
PDEIFNDL_01752 1.1e-239 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
PDEIFNDL_01753 0.0 3.2.1.37 GH43 G Glycosyl hydrolases family 43
PDEIFNDL_01754 2.3e-234 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
PDEIFNDL_01755 1.2e-236 G Transporter major facilitator family protein
PDEIFNDL_01756 5.2e-105 K Bacterial regulatory proteins, tetR family
PDEIFNDL_01757 0.0 lacZ3 3.2.1.23 G Beta-galactosidase trimerisation domain
PDEIFNDL_01758 9.4e-115 K Bacterial regulatory proteins, tetR family
PDEIFNDL_01759 1.4e-253 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
PDEIFNDL_01760 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
PDEIFNDL_01761 3.9e-156 hgdC I BadF/BadG/BcrA/BcrD ATPase family
PDEIFNDL_01762 3.6e-139 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDEIFNDL_01763 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
PDEIFNDL_01764 8.9e-245 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDEIFNDL_01765 7e-41 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDEIFNDL_01767 1.5e-195 S Endonuclease/Exonuclease/phosphatase family
PDEIFNDL_01768 2.7e-43 V ATPases associated with a variety of cellular activities
PDEIFNDL_01769 6.4e-23
PDEIFNDL_01770 2.8e-22 M cell wall anchor domain protein
PDEIFNDL_01771 3.8e-99 tmp1 S Domain of unknown function (DUF4391)
PDEIFNDL_01772 3e-168 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
PDEIFNDL_01773 9.6e-233 aspB E Aminotransferase class-V
PDEIFNDL_01774 1.5e-70 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
PDEIFNDL_01775 1.6e-188 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
PDEIFNDL_01776 0.0 helD 3.6.4.12 L Psort location Cytoplasmic, score 8.87
PDEIFNDL_01777 3e-59 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
PDEIFNDL_01778 5.5e-13 KL Domain of unknown function (DUF3427)
PDEIFNDL_01779 0.0 KL Domain of unknown function (DUF3427)
PDEIFNDL_01780 1.5e-76
PDEIFNDL_01781 1.4e-69 S Bacterial PH domain
PDEIFNDL_01782 2.5e-247 S zinc finger
PDEIFNDL_01783 5.2e-287 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
PDEIFNDL_01784 5.2e-116 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PDEIFNDL_01785 1.5e-253 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PDEIFNDL_01786 0.0 eccCa D FtsK/SpoIIIE family
PDEIFNDL_01787 9.6e-157 T Forkhead associated domain
PDEIFNDL_01788 1e-191
PDEIFNDL_01789 9.8e-55
PDEIFNDL_01790 9.7e-189
PDEIFNDL_01791 1.3e-146
PDEIFNDL_01792 1.3e-178
PDEIFNDL_01793 2.4e-256 O Subtilase family
PDEIFNDL_01795 1.5e-43 S Proteins of 100 residues with WXG
PDEIFNDL_01796 1.1e-47 esxU S Proteins of 100 residues with WXG
PDEIFNDL_01797 3.8e-225 snm S WXG100 protein secretion system (Wss), protein YukD
PDEIFNDL_01798 0.0 O Type VII secretion system ESX-1, transport TM domain B
PDEIFNDL_01799 3.2e-168
PDEIFNDL_01800 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
PDEIFNDL_01801 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDEIFNDL_01802 9.5e-175 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PDEIFNDL_01803 0.0 pacS 3.6.3.54 P E1-E2 ATPase
PDEIFNDL_01804 1.1e-38 csoR S Metal-sensitive transcriptional repressor
PDEIFNDL_01805 1.4e-133 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PDEIFNDL_01806 3.9e-246 G Major Facilitator Superfamily
PDEIFNDL_01807 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
PDEIFNDL_01808 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
PDEIFNDL_01810 1.6e-263 KLT Protein tyrosine kinase
PDEIFNDL_01811 0.0 S Fibronectin type 3 domain
PDEIFNDL_01812 2.9e-230 S ATPase family associated with various cellular activities (AAA)
PDEIFNDL_01813 8.3e-221 S Protein of unknown function DUF58
PDEIFNDL_01814 0.0 E Transglutaminase-like superfamily
PDEIFNDL_01815 4.4e-163 3.1.3.16 T Sigma factor PP2C-like phosphatases
PDEIFNDL_01816 4.8e-104 B Belongs to the OprB family
PDEIFNDL_01817 1.8e-101 T Forkhead associated domain
PDEIFNDL_01818 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDEIFNDL_01819 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDEIFNDL_01820 6.8e-100
PDEIFNDL_01821 6.7e-181 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
PDEIFNDL_01822 3.3e-126 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PDEIFNDL_01823 7.2e-253 S UPF0210 protein
PDEIFNDL_01824 7.1e-43 gcvR T Belongs to the UPF0237 family
PDEIFNDL_01825 1.1e-23 lmrB EGP Major facilitator Superfamily
PDEIFNDL_01826 9e-234 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
PDEIFNDL_01827 4e-250 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
PDEIFNDL_01828 3.4e-141 glpR K DeoR C terminal sensor domain
PDEIFNDL_01829 8.8e-228 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
PDEIFNDL_01830 1.4e-220 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
PDEIFNDL_01831 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
PDEIFNDL_01832 2.3e-133 glxR K helix_turn_helix, cAMP Regulatory protein
PDEIFNDL_01833 1.9e-214 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
PDEIFNDL_01834 1.3e-86 J TM2 domain
PDEIFNDL_01835 2.2e-193 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PDEIFNDL_01836 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
PDEIFNDL_01837 4.3e-236 S Uncharacterized conserved protein (DUF2183)
PDEIFNDL_01838 2.7e-70 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
PDEIFNDL_01839 1.9e-208 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
PDEIFNDL_01840 3.4e-160 mhpC I Alpha/beta hydrolase family
PDEIFNDL_01841 3.5e-114 F Domain of unknown function (DUF4916)
PDEIFNDL_01842 3.9e-60 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
PDEIFNDL_01843 5.6e-170 S G5
PDEIFNDL_01844 2.1e-88
PDEIFNDL_01845 0.0 amyE 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
PDEIFNDL_01846 0.0 amyE 3.2.1.1, 3.2.1.80 GH13 G Bacterial Ig-like domain 2
PDEIFNDL_01847 2.1e-224 C Polysaccharide pyruvyl transferase
PDEIFNDL_01848 2.8e-207 GT2 M Glycosyltransferase like family 2
PDEIFNDL_01849 1.3e-190 1.13.11.79 C Psort location Cytoplasmic, score 8.87
PDEIFNDL_01850 4.7e-207 wbbI M transferase activity, transferring glycosyl groups
PDEIFNDL_01851 1.5e-286 S Psort location CytoplasmicMembrane, score 9.99
PDEIFNDL_01852 1.2e-255 S Psort location CytoplasmicMembrane, score 9.99
PDEIFNDL_01853 1.1e-189 2.4.1.166 GT2 M Glycosyltransferase like family 2
PDEIFNDL_01854 1.8e-158 cps1D M Domain of unknown function (DUF4422)
PDEIFNDL_01855 0.0 amyE 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
PDEIFNDL_01856 2.9e-72
PDEIFNDL_01857 1.6e-28 K Cro/C1-type HTH DNA-binding domain
PDEIFNDL_01858 1.7e-77
PDEIFNDL_01859 2.6e-97 3.1.3.48 T Low molecular weight phosphatase family
PDEIFNDL_01860 5.5e-246 wcoI DM Psort location CytoplasmicMembrane, score
PDEIFNDL_01861 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PDEIFNDL_01862 6.5e-148 P Binding-protein-dependent transport system inner membrane component
PDEIFNDL_01863 1.7e-162 P Binding-protein-dependent transport system inner membrane component
PDEIFNDL_01864 6.6e-270 G Bacterial extracellular solute-binding protein
PDEIFNDL_01865 1.4e-184 K Psort location Cytoplasmic, score
PDEIFNDL_01866 2.4e-181 K helix_turn _helix lactose operon repressor
PDEIFNDL_01867 1.8e-223 G Bacterial extracellular solute-binding protein
PDEIFNDL_01868 1.4e-162 G PFAM binding-protein-dependent transport systems inner membrane component
PDEIFNDL_01869 1.9e-144 G Binding-protein-dependent transport system inner membrane component
PDEIFNDL_01870 0.0 3.2.1.177 GH31 G Belongs to the glycosyl hydrolase 31 family
PDEIFNDL_01871 2e-56 yccF S Inner membrane component domain
PDEIFNDL_01872 3.3e-66 S Psort location CytoplasmicMembrane, score 9.99
PDEIFNDL_01873 2e-103
PDEIFNDL_01874 3.7e-47 S enterobacterial common antigen metabolic process
PDEIFNDL_01875 1.3e-115 S enterobacterial common antigen metabolic process
PDEIFNDL_01877 2.1e-154 O ATPase family associated with various cellular activities (AAA)
PDEIFNDL_01878 9.1e-309 O Subtilase family
PDEIFNDL_01879 2.7e-11
PDEIFNDL_01880 2.6e-29 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PDEIFNDL_01882 1.6e-24
PDEIFNDL_01884 4e-81 J tRNA cytidylyltransferase activity
PDEIFNDL_01885 1.1e-69
PDEIFNDL_01887 1e-26 L Transposase
PDEIFNDL_01888 5.2e-16 L Transposase, Mutator family
PDEIFNDL_01889 3.1e-45 L Transposase, Mutator family
PDEIFNDL_01890 1.1e-249 S Polysaccharide biosynthesis protein
PDEIFNDL_01891 8e-186 S Polysaccharide pyruvyl transferase
PDEIFNDL_01892 3.8e-166 1.13.11.79 C Psort location Cytoplasmic, score 8.87
PDEIFNDL_01893 2.1e-178 S Polysaccharide pyruvyl transferase
PDEIFNDL_01894 3e-99 S Hexapeptide repeat of succinyl-transferase
PDEIFNDL_01895 1e-163
PDEIFNDL_01896 2.2e-150
PDEIFNDL_01897 2.3e-171 MA20_43635 M Capsular polysaccharide synthesis protein
PDEIFNDL_01898 1.1e-160 epsJ GT2 S Glycosyltransferase like family 2
PDEIFNDL_01899 3.7e-225 M Glycosyl transferase 4-like domain
PDEIFNDL_01900 3.3e-219 M Domain of unknown function (DUF1972)
PDEIFNDL_01901 5.3e-153 M Psort location Cytoplasmic, score 8.87
PDEIFNDL_01902 1.1e-147 cps1D M Domain of unknown function (DUF4422)
PDEIFNDL_01903 1.7e-173 MA20_43635 M Capsular polysaccharide synthesis protein
PDEIFNDL_01904 6.2e-177 M Glycosyl transferase, family 2
PDEIFNDL_01906 3.7e-165 H Core-2/I-Branching enzyme
PDEIFNDL_01907 5.5e-251 S Psort location CytoplasmicMembrane, score 9.99
PDEIFNDL_01908 1e-13 S enterobacterial common antigen metabolic process
PDEIFNDL_01909 5.2e-15 L Transposase, Mutator family
PDEIFNDL_01910 7.5e-189
PDEIFNDL_01911 0.0 rfbP M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
PDEIFNDL_01912 0.0 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
PDEIFNDL_01913 5e-190 S Endonuclease/Exonuclease/phosphatase family
PDEIFNDL_01914 2.5e-47
PDEIFNDL_01915 4.7e-285 EGP Major facilitator Superfamily
PDEIFNDL_01916 3.5e-241 T Diguanylate cyclase (GGDEF) domain protein
PDEIFNDL_01917 1.4e-126 L Protein of unknown function (DUF1524)
PDEIFNDL_01918 9.3e-166 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
PDEIFNDL_01919 2.1e-241 mntH P H( )-stimulated, divalent metal cation uptake system
PDEIFNDL_01920 2.9e-196 K helix_turn _helix lactose operon repressor
PDEIFNDL_01921 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PDEIFNDL_01922 9.1e-240 G Bacterial extracellular solute-binding protein
PDEIFNDL_01923 1e-128 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
PDEIFNDL_01924 4e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
PDEIFNDL_01925 0.0 cydD V ABC transporter transmembrane region
PDEIFNDL_01926 0.0 fadD 6.2.1.3 I AMP-binding enzyme
PDEIFNDL_01927 6.3e-298 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
PDEIFNDL_01928 1e-130 araD 4.1.2.17, 5.1.3.4 G Class II Aldolase and Adducin N-terminal domain
PDEIFNDL_01929 0.0 araB 2.7.1.16, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
PDEIFNDL_01930 2.1e-210 K helix_turn _helix lactose operon repressor
PDEIFNDL_01931 2.4e-286 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
PDEIFNDL_01932 1.4e-189 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PDEIFNDL_01933 5.5e-242 hom 1.1.1.3 E Homoserine dehydrogenase
PDEIFNDL_01934 1.7e-298 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PDEIFNDL_01935 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PDEIFNDL_01936 1.5e-272 mmuP E amino acid
PDEIFNDL_01937 7e-60 psp1 3.5.99.10 J Endoribonuclease L-PSP
PDEIFNDL_01939 4.7e-122 cyaA 4.6.1.1 S CYTH
PDEIFNDL_01940 1e-168 trxA2 O Tetratricopeptide repeat
PDEIFNDL_01941 8.6e-179
PDEIFNDL_01942 4.8e-195
PDEIFNDL_01943 6.8e-149 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
PDEIFNDL_01944 2.3e-122 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
PDEIFNDL_01945 2.3e-44 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PDEIFNDL_01946 5.6e-283 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PDEIFNDL_01947 1.6e-163 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PDEIFNDL_01948 1.1e-308 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PDEIFNDL_01949 4.5e-149 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDEIFNDL_01950 4.4e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PDEIFNDL_01951 8.9e-31 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDEIFNDL_01952 2e-146 atpB C it plays a direct role in the translocation of protons across the membrane
PDEIFNDL_01953 4.5e-207 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PDEIFNDL_01955 5e-273 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PDEIFNDL_01956 7.4e-192 yfdV S Membrane transport protein
PDEIFNDL_01957 0.0 oxc 4.1.1.8 EH Thiamine pyrophosphate enzyme, central domain
PDEIFNDL_01958 2.7e-174 M LPXTG-motif cell wall anchor domain protein
PDEIFNDL_01959 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
PDEIFNDL_01960 3.4e-91 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
PDEIFNDL_01961 9.4e-98 mntP P Probably functions as a manganese efflux pump
PDEIFNDL_01962 4.9e-134
PDEIFNDL_01963 4.9e-134 KT Transcriptional regulatory protein, C terminal
PDEIFNDL_01964 3.2e-123 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PDEIFNDL_01965 1.6e-288 E Bacterial extracellular solute-binding proteins, family 5 Middle
PDEIFNDL_01966 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PDEIFNDL_01967 0.0 S domain protein
PDEIFNDL_01968 6.7e-69 tyrA 5.4.99.5 E Chorismate mutase type II
PDEIFNDL_01969 3.7e-79 K helix_turn_helix ASNC type
PDEIFNDL_01970 1.9e-247 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PDEIFNDL_01971 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
PDEIFNDL_01972 2.1e-51 S Protein of unknown function (DUF2469)
PDEIFNDL_01973 2e-205 2.3.1.57 J Acetyltransferase (GNAT) domain
PDEIFNDL_01974 8.7e-284 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDEIFNDL_01975 8.6e-287 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PDEIFNDL_01976 1.2e-46 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDEIFNDL_01977 3.6e-134 K Psort location Cytoplasmic, score
PDEIFNDL_01978 1.2e-132 spoU 2.1.1.185 J RNA methyltransferase TrmH family
PDEIFNDL_01979 2.7e-104 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PDEIFNDL_01980 6.3e-169 rmuC S RmuC family
PDEIFNDL_01981 3.4e-134 3.6.3.3, 3.6.3.5, 3.6.3.54 P Heavy metal translocating P-type atpase
PDEIFNDL_01982 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PDEIFNDL_01983 1.4e-164 fahA Q Fumarylacetoacetate (FAA) hydrolase family
PDEIFNDL_01984 1.1e-147 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PDEIFNDL_01985 8e-79
PDEIFNDL_01986 2.4e-209 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDEIFNDL_01987 4.9e-53 M Protein of unknown function (DUF3152)
PDEIFNDL_01988 1.2e-08 M Protein of unknown function (DUF3152)
PDEIFNDL_01989 9.2e-130 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
PDEIFNDL_01991 1.7e-70 rplI J Binds to the 23S rRNA
PDEIFNDL_01992 3.5e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PDEIFNDL_01993 3.8e-66 ssb1 L Single-stranded DNA-binding protein
PDEIFNDL_01994 2.5e-46 rpsF J Binds together with S18 to 16S ribosomal RNA
PDEIFNDL_01995 3.3e-186 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDEIFNDL_01996 3.7e-174 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PDEIFNDL_01997 1.1e-259 EGP Major Facilitator Superfamily
PDEIFNDL_01998 1.2e-166 iunH2 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PDEIFNDL_01999 1.1e-197 K helix_turn _helix lactose operon repressor
PDEIFNDL_02000 1.2e-61
PDEIFNDL_02001 2e-202 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PDEIFNDL_02002 8e-185 L Helix-turn-helix domain
PDEIFNDL_02003 2.7e-95 L Resolvase, N terminal domain
PDEIFNDL_02004 2.5e-33 S Domain of unknown function (DUF4143)
PDEIFNDL_02005 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
PDEIFNDL_02006 4.8e-193 M Glycosyltransferase like family 2
PDEIFNDL_02007 5e-148 rgpC U Transport permease protein
PDEIFNDL_02008 1.8e-242 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
PDEIFNDL_02009 0.0 rgpF M Rhamnan synthesis protein F
PDEIFNDL_02010 4.5e-165 I Acyltransferase family
PDEIFNDL_02011 2.9e-152 yfdH 2.4.2.53 GT2 M Glycosyltransferase like family 2
PDEIFNDL_02012 8.7e-191 S Glucosyl transferase GtrII
PDEIFNDL_02013 1.9e-147 1.1.1.339 GM NAD dependent epimerase/dehydratase family
PDEIFNDL_02014 7.7e-199 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PDEIFNDL_02015 1e-281 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PDEIFNDL_02016 2e-174 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PDEIFNDL_02017 0.0 lytC 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
PDEIFNDL_02018 2.2e-257 S AAA domain
PDEIFNDL_02019 8.1e-68
PDEIFNDL_02020 1.2e-07
PDEIFNDL_02021 1.2e-294 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
PDEIFNDL_02022 2.8e-58
PDEIFNDL_02024 4.8e-189 EGP Major facilitator Superfamily

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)