ORF_ID e_value Gene_name EC_number CAZy COGs Description
GNAMLDFM_00001 5.5e-43
GNAMLDFM_00002 4.7e-76 xylR GK ROK family
GNAMLDFM_00003 6.6e-167 xylB 1.1.1.57, 2.7.1.17 G Belongs to the FGGY kinase family
GNAMLDFM_00004 2.1e-79 G ABC-type sugar transport system periplasmic component
GNAMLDFM_00005 1.1e-119 G ATPases associated with a variety of cellular activities
GNAMLDFM_00006 1.9e-72 P branched-chain amino acid ABC transporter, permease protein
GNAMLDFM_00007 1.9e-57 G Branched-chain amino acid transport system / permease component
GNAMLDFM_00008 5.9e-47 5.3.1.27 G sugar phosphate isomerase involved in capsule formation
GNAMLDFM_00010 8.2e-64 K Helix-turn-helix domain
GNAMLDFM_00011 7.8e-235 glf 5.4.99.9 M UDP-galactopyranose mutase
GNAMLDFM_00012 5.1e-162
GNAMLDFM_00013 9.2e-106 S Domain of unknown function (DUF4190)
GNAMLDFM_00014 4e-158 fahA Q Fumarylacetoacetate (FAA) hydrolase family
GNAMLDFM_00015 1.2e-163 S Auxin Efflux Carrier
GNAMLDFM_00016 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GNAMLDFM_00018 2e-216 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
GNAMLDFM_00019 3.7e-215 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
GNAMLDFM_00020 2.8e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GNAMLDFM_00021 3.9e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GNAMLDFM_00022 1.6e-49 P Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00023 0.0 G N-terminal domain of (some) glycogen debranching enzymes
GNAMLDFM_00024 4.7e-130
GNAMLDFM_00025 2.3e-233 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
GNAMLDFM_00026 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
GNAMLDFM_00027 2.8e-257 S Calcineurin-like phosphoesterase
GNAMLDFM_00028 1.4e-08 S Calcineurin-like phosphoesterase
GNAMLDFM_00029 2.2e-140 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
GNAMLDFM_00030 4.2e-272 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
GNAMLDFM_00031 9.3e-132 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
GNAMLDFM_00032 2.5e-19 S Bacterial PH domain
GNAMLDFM_00033 4.3e-40 2.7.13.3 T Histidine kinase
GNAMLDFM_00034 9e-220 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
GNAMLDFM_00035 4.5e-132 yxeO 3.6.3.21 E ATPases associated with a variety of cellular activities
GNAMLDFM_00036 9.5e-103 S L-2-amino-thiazoline-4-carboxylic acid hydrolase
GNAMLDFM_00037 2.6e-138 P Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00038 1.1e-119 ytmL P Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00039 2.1e-157 ET Bacterial periplasmic substrate-binding proteins
GNAMLDFM_00040 7.6e-255 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
GNAMLDFM_00041 6.8e-256 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GNAMLDFM_00042 2.1e-222 G Transmembrane secretion effector
GNAMLDFM_00043 8.1e-131 K Bacterial regulatory proteins, tetR family
GNAMLDFM_00044 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
GNAMLDFM_00045 1.5e-302 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
GNAMLDFM_00046 2.5e-57 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
GNAMLDFM_00047 3.8e-231 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
GNAMLDFM_00048 1.8e-237 hom 1.1.1.3 E Homoserine dehydrogenase
GNAMLDFM_00049 1.4e-185 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
GNAMLDFM_00050 9e-270 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
GNAMLDFM_00051 3.2e-89 K Acetyltransferase (GNAT) family
GNAMLDFM_00052 7.2e-29 S Protein of unknown function (DUF1778)
GNAMLDFM_00053 3.6e-130 V ATPases associated with a variety of cellular activities
GNAMLDFM_00054 2e-221 V Efflux ABC transporter, permease protein
GNAMLDFM_00055 1.2e-191 K Bacterial regulatory proteins, lacI family
GNAMLDFM_00056 2.7e-249 4.2.1.68 M Enolase C-terminal domain-like
GNAMLDFM_00057 2.8e-148 IQ KR domain
GNAMLDFM_00058 5.4e-202 fucP G Major Facilitator Superfamily
GNAMLDFM_00059 3.2e-149 S Amidohydrolase
GNAMLDFM_00060 1.7e-165 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
GNAMLDFM_00061 1.9e-167 mdcF S Transporter, auxin efflux carrier (AEC) family protein
GNAMLDFM_00062 2.4e-231 dapE 3.5.1.18 E Peptidase dimerisation domain
GNAMLDFM_00063 0.0 rne 3.1.26.12 J Ribonuclease E/G family
GNAMLDFM_00064 1.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
GNAMLDFM_00065 5.8e-39 rpmA J Ribosomal L27 protein
GNAMLDFM_00066 2.3e-311 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GNAMLDFM_00067 1.9e-195 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
GNAMLDFM_00068 1.5e-215 G polysaccharide deacetylase
GNAMLDFM_00069 3.8e-229 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
GNAMLDFM_00071 1.4e-31 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
GNAMLDFM_00072 7e-110 nusG K Participates in transcription elongation, termination and antitermination
GNAMLDFM_00073 2.1e-145 K Psort location Cytoplasmic, score
GNAMLDFM_00074 4e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GNAMLDFM_00075 2.7e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
GNAMLDFM_00076 3.2e-164 QT PucR C-terminal helix-turn-helix domain
GNAMLDFM_00077 0.0
GNAMLDFM_00078 2.2e-163 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
GNAMLDFM_00079 1.2e-90 bioY S BioY family
GNAMLDFM_00080 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
GNAMLDFM_00081 4.5e-294 pccB I Carboxyl transferase domain
GNAMLDFM_00082 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
GNAMLDFM_00083 9.5e-46 XK27_04590 S NADPH-dependent FMN reductase
GNAMLDFM_00088 7.5e-181 K Helix-turn-helix XRE-family like proteins
GNAMLDFM_00089 2.3e-21 yxiO G Major facilitator Superfamily
GNAMLDFM_00090 1.8e-53 relB L RelB antitoxin
GNAMLDFM_00091 6.3e-69 T Toxic component of a toxin-antitoxin (TA) module
GNAMLDFM_00092 2.5e-130 K helix_turn_helix, mercury resistance
GNAMLDFM_00093 4.5e-236 yxiO S Vacuole effluxer Atg22 like
GNAMLDFM_00094 7.4e-194 yegV G pfkB family carbohydrate kinase
GNAMLDFM_00095 2.5e-29 rpmB J Ribosomal L28 family
GNAMLDFM_00096 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
GNAMLDFM_00097 1.7e-102 rsmD 2.1.1.171 L Conserved hypothetical protein 95
GNAMLDFM_00098 5.3e-178 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
GNAMLDFM_00099 4e-300 yegQ O Peptidase family U32 C-terminal domain
GNAMLDFM_00100 1.3e-196 yfiH Q Multi-copper polyphenol oxidoreductase laccase
GNAMLDFM_00101 2.1e-149 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
GNAMLDFM_00102 2.6e-126 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GNAMLDFM_00103 8.9e-44 D nuclear chromosome segregation
GNAMLDFM_00104 1e-267 pepC 3.4.22.40 E Peptidase C1-like family
GNAMLDFM_00105 1.7e-262 pepC 3.4.22.40 E Peptidase C1-like family
GNAMLDFM_00106 6.8e-99 U MarC family integral membrane protein
GNAMLDFM_00107 4.6e-188 K Periplasmic binding protein domain
GNAMLDFM_00108 3.1e-237 G Bacterial extracellular solute-binding protein
GNAMLDFM_00109 2.6e-169 malC U Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00110 5.7e-152 P Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00111 0.0 kojP 2.4.1.230 GH65 G Glycosyl hydrolase family 65 central catalytic domain
GNAMLDFM_00112 1.2e-155 EG EamA-like transporter family
GNAMLDFM_00113 4.8e-114 pgmB 5.4.2.6 S phosphonoacetaldehyde hydrolase activity
GNAMLDFM_00114 0.0 ebgA 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GNAMLDFM_00115 4.1e-86 ebgC G YhcH YjgK YiaL family protein
GNAMLDFM_00116 4.1e-217 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GNAMLDFM_00117 1.9e-236 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
GNAMLDFM_00118 7.4e-124 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GNAMLDFM_00119 9.7e-239 EGP Sugar (and other) transporter
GNAMLDFM_00120 7.1e-205 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
GNAMLDFM_00121 3.8e-142 KT Transcriptional regulatory protein, C terminal
GNAMLDFM_00122 2.8e-202 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
GNAMLDFM_00123 1.2e-156 pstC P probably responsible for the translocation of the substrate across the membrane
GNAMLDFM_00124 1.3e-171 pstA P Phosphate transport system permease
GNAMLDFM_00125 1.2e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GNAMLDFM_00126 1.1e-251 pbuO S Permease family
GNAMLDFM_00127 6.4e-145 3.2.1.8 S alpha beta
GNAMLDFM_00128 2.4e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GNAMLDFM_00129 9.3e-49 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
GNAMLDFM_00130 3.8e-185 T Forkhead associated domain
GNAMLDFM_00131 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
GNAMLDFM_00132 4.8e-28 L Superfamily I DNA and RNA helicases and helicase subunits
GNAMLDFM_00133 7e-93 flgA NO SAF
GNAMLDFM_00134 4.3e-31 fmdB S Putative regulatory protein
GNAMLDFM_00135 7.3e-56 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
GNAMLDFM_00136 2.6e-85 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
GNAMLDFM_00137 1.6e-134
GNAMLDFM_00138 1.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GNAMLDFM_00142 4.1e-25 rpmG J Ribosomal protein L33
GNAMLDFM_00143 1.3e-213 murB 1.3.1.98 M Cell wall formation
GNAMLDFM_00144 1.4e-268 E aromatic amino acid transport protein AroP K03293
GNAMLDFM_00145 2.9e-59 fdxA C 4Fe-4S binding domain
GNAMLDFM_00146 5.7e-222 dapC E Aminotransferase class I and II
GNAMLDFM_00147 1.4e-234 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GNAMLDFM_00148 2.5e-20 S EamA-like transporter family
GNAMLDFM_00149 1.6e-60 S EamA-like transporter family
GNAMLDFM_00151 4.4e-21
GNAMLDFM_00152 9e-217 rbsR K helix_turn _helix lactose operon repressor
GNAMLDFM_00153 3.5e-241 malE G Bacterial extracellular solute-binding protein
GNAMLDFM_00154 2.7e-163 malC U Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00155 8e-160 U Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00156 1.2e-243 bglA 3.2.1.21 G Glycosyl hydrolase family 1
GNAMLDFM_00157 1.6e-240 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
GNAMLDFM_00158 1.3e-69 S Nucleotidyltransferase substrate binding protein like
GNAMLDFM_00159 1.6e-45 S Nucleotidyltransferase domain
GNAMLDFM_00161 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
GNAMLDFM_00162 2.1e-142 K Bacterial regulatory proteins, tetR family
GNAMLDFM_00163 2.1e-254 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
GNAMLDFM_00164 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
GNAMLDFM_00165 7.7e-137 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GNAMLDFM_00166 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
GNAMLDFM_00167 1.8e-256 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GNAMLDFM_00168 3.7e-42 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GNAMLDFM_00169 4.1e-95 ywrO 1.6.5.2 S Flavodoxin-like fold
GNAMLDFM_00170 0.0 fadD 6.2.1.3 I AMP-binding enzyme
GNAMLDFM_00171 8.8e-63 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GNAMLDFM_00172 1.4e-77 F Nucleoside 2-deoxyribosyltransferase
GNAMLDFM_00174 1.6e-200 S Endonuclease/Exonuclease/phosphatase family
GNAMLDFM_00175 2.9e-179 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
GNAMLDFM_00176 1e-234 aspB E Aminotransferase class-V
GNAMLDFM_00177 6.5e-201 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
GNAMLDFM_00178 1.6e-84 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
GNAMLDFM_00179 4.5e-100 XK27_03610 K Acetyltransferase (GNAT) domain
GNAMLDFM_00180 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
GNAMLDFM_00181 3.4e-146 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
GNAMLDFM_00182 7.8e-249 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
GNAMLDFM_00183 6e-151 map 3.4.11.18 E Methionine aminopeptidase
GNAMLDFM_00184 1e-138 S Short repeat of unknown function (DUF308)
GNAMLDFM_00185 0.0 pepO 3.4.24.71 O Peptidase family M13
GNAMLDFM_00186 2.2e-117 L Single-strand binding protein family
GNAMLDFM_00187 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
GNAMLDFM_00188 1.7e-200 pflA 1.97.1.4 O Radical SAM superfamily
GNAMLDFM_00189 5.1e-258 S AMMECR1
GNAMLDFM_00190 4.1e-267 recD2 3.6.4.12 L PIF1-like helicase
GNAMLDFM_00191 4.8e-122 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
GNAMLDFM_00192 4.8e-293 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
GNAMLDFM_00193 2.1e-211 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
GNAMLDFM_00194 1.5e-118 ywlC 2.7.7.87 J Belongs to the SUA5 family
GNAMLDFM_00195 3.3e-124 livF E ATPases associated with a variety of cellular activities
GNAMLDFM_00196 1.8e-161 E Branched-chain amino acid ATP-binding cassette transporter
GNAMLDFM_00197 1e-188 livM U Belongs to the binding-protein-dependent transport system permease family
GNAMLDFM_00198 5.4e-111 U Belongs to the binding-protein-dependent transport system permease family
GNAMLDFM_00199 2.6e-206 livK E Receptor family ligand binding region
GNAMLDFM_00200 6.5e-154 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
GNAMLDFM_00201 4.1e-190 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GNAMLDFM_00202 1.3e-36 rpmE J Binds the 23S rRNA
GNAMLDFM_00204 3.2e-66 yebQ EGP Major facilitator Superfamily
GNAMLDFM_00205 2.4e-147
GNAMLDFM_00206 5e-72 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
GNAMLDFM_00207 4.2e-166 dkgB S Oxidoreductase, aldo keto reductase family protein
GNAMLDFM_00208 1.5e-18 lmrB U Major Facilitator Superfamily
GNAMLDFM_00209 3.4e-86 K Winged helix DNA-binding domain
GNAMLDFM_00210 1.5e-177 glkA 2.7.1.2 G ROK family
GNAMLDFM_00212 2.8e-305 EGP Major Facilitator Superfamily
GNAMLDFM_00213 0.0 yjjK S ATP-binding cassette protein, ChvD family
GNAMLDFM_00214 1.5e-169 tesB I Thioesterase-like superfamily
GNAMLDFM_00215 2.5e-92 S Protein of unknown function (DUF3180)
GNAMLDFM_00216 6.1e-263 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
GNAMLDFM_00217 1.3e-159 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
GNAMLDFM_00218 5.8e-106 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
GNAMLDFM_00220 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GNAMLDFM_00221 2.7e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
GNAMLDFM_00222 1.5e-206 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
GNAMLDFM_00223 3.7e-250 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
GNAMLDFM_00224 4e-298
GNAMLDFM_00225 3.1e-190 natA V ATPases associated with a variety of cellular activities
GNAMLDFM_00226 2.3e-234 epsG M Glycosyl transferase family 21
GNAMLDFM_00227 2.8e-272 S AI-2E family transporter
GNAMLDFM_00228 2.3e-178 3.4.14.13 M Glycosyltransferase like family 2
GNAMLDFM_00229 1.2e-203 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
GNAMLDFM_00230 2.1e-262 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
GNAMLDFM_00233 4.5e-161 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
GNAMLDFM_00235 2.6e-11
GNAMLDFM_00236 1.4e-20
GNAMLDFM_00237 1.8e-40
GNAMLDFM_00238 3.8e-278 pip S YhgE Pip domain protein
GNAMLDFM_00239 0.0 pip S YhgE Pip domain protein
GNAMLDFM_00240 5.7e-138 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
GNAMLDFM_00241 1.2e-59 S Protein of unknown function (DUF4235)
GNAMLDFM_00242 3.6e-102 G Phosphoglycerate mutase family
GNAMLDFM_00243 2.9e-254 amyE G Bacterial extracellular solute-binding protein
GNAMLDFM_00244 5.3e-184 K Psort location Cytoplasmic, score
GNAMLDFM_00245 4.4e-147 malC G Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00246 6.8e-153 rafG G ABC transporter permease
GNAMLDFM_00247 1.1e-104 S Protein of unknown function, DUF624
GNAMLDFM_00248 3.8e-268 aroP E aromatic amino acid transport protein AroP K03293
GNAMLDFM_00249 7.5e-129 V ABC transporter
GNAMLDFM_00250 0.0 V FtsX-like permease family
GNAMLDFM_00251 9.5e-278 cycA E Amino acid permease
GNAMLDFM_00252 1.2e-91 ydgJ K helix_turn_helix multiple antibiotic resistance protein
GNAMLDFM_00253 0.0 lmrA1 V ABC transporter, ATP-binding protein
GNAMLDFM_00254 0.0 lmrA2 V ABC transporter transmembrane region
GNAMLDFM_00255 8.1e-179 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GNAMLDFM_00256 1.1e-256 G MFS/sugar transport protein
GNAMLDFM_00258 6.5e-182 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GNAMLDFM_00259 9.4e-121
GNAMLDFM_00260 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GNAMLDFM_00261 2.5e-46
GNAMLDFM_00262 1.2e-277 pepC 3.4.22.40 E Peptidase C1-like family
GNAMLDFM_00263 1.8e-176 appB EP Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00264 3.2e-173 dppC EP N-terminal TM domain of oligopeptide transport permease C
GNAMLDFM_00265 0.0 oppD P Belongs to the ABC transporter superfamily
GNAMLDFM_00266 0.0 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
GNAMLDFM_00267 4e-34 EGP Major facilitator Superfamily
GNAMLDFM_00268 3.1e-54 EGP Major facilitator Superfamily
GNAMLDFM_00269 1.5e-266 S AAA domain
GNAMLDFM_00270 0.0 lacZ 3.2.1.23 G Beta-galactosidase trimerisation domain
GNAMLDFM_00271 8.1e-196 K helix_turn _helix lactose operon repressor
GNAMLDFM_00272 1.8e-242 G Bacterial extracellular solute-binding protein
GNAMLDFM_00273 1.3e-176 U Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00274 1.4e-153 U Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00275 3.7e-192 G Glycosyl hydrolases family 43
GNAMLDFM_00276 1.2e-252 S Domain of unknown function (DUF4143)
GNAMLDFM_00277 8.7e-270 S ATPase domain predominantly from Archaea
GNAMLDFM_00278 0.0 mdlA2 V ABC transporter
GNAMLDFM_00279 0.0 yknV V ABC transporter
GNAMLDFM_00280 2e-185 tatD L TatD related DNase
GNAMLDFM_00281 0.0 kup P Transport of potassium into the cell
GNAMLDFM_00282 1.8e-159 S Glutamine amidotransferase domain
GNAMLDFM_00283 6e-140 T HD domain
GNAMLDFM_00284 8.1e-184 V ABC transporter
GNAMLDFM_00285 3.3e-256 V ABC transporter permease
GNAMLDFM_00286 6.8e-230 K Cell envelope-related transcriptional attenuator domain
GNAMLDFM_00287 1.7e-193 lytC 3.1.4.46, 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
GNAMLDFM_00288 5.6e-172 rfbJ M Glycosyl transferase family 2
GNAMLDFM_00289 0.0
GNAMLDFM_00290 1.2e-204 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
GNAMLDFM_00291 1.9e-288 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
GNAMLDFM_00292 1.6e-171 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
GNAMLDFM_00293 5.8e-183 M Glycosyltransferase like family 2
GNAMLDFM_00294 0.0 rgpF M Rhamnan synthesis protein F
GNAMLDFM_00295 7.4e-144 rgpC U Transport permease protein
GNAMLDFM_00296 1.8e-234 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
GNAMLDFM_00297 2.1e-285 lsgC M transferase activity, transferring glycosyl groups
GNAMLDFM_00298 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
GNAMLDFM_00299 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
GNAMLDFM_00301 1.6e-271 aspA 4.3.1.1 E Fumarase C C-terminus
GNAMLDFM_00302 1.2e-135 M Mechanosensitive ion channel
GNAMLDFM_00303 3.7e-185 S CAAX protease self-immunity
GNAMLDFM_00304 9.7e-239 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
GNAMLDFM_00305 6.9e-151 U Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00306 9.9e-161 U Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00307 2.9e-218 P Bacterial extracellular solute-binding protein
GNAMLDFM_00308 9.1e-228 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
GNAMLDFM_00309 4.6e-180 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
GNAMLDFM_00310 8.8e-189 plsC2 2.3.1.51 I Phosphate acyltransferases
GNAMLDFM_00311 3.6e-64 psp1 3.5.99.10 J Endoribonuclease L-PSP
GNAMLDFM_00314 6.9e-118 cyaA 4.6.1.1 S CYTH
GNAMLDFM_00315 1.1e-170 trxA2 O Tetratricopeptide repeat
GNAMLDFM_00316 2.5e-178
GNAMLDFM_00317 6.1e-179
GNAMLDFM_00318 3.6e-158 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
GNAMLDFM_00319 5.2e-130 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
GNAMLDFM_00320 9.4e-49 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
GNAMLDFM_00321 6.1e-282 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GNAMLDFM_00322 6.1e-163 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GNAMLDFM_00323 1.3e-309 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GNAMLDFM_00324 3.5e-149 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GNAMLDFM_00325 1.8e-58 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GNAMLDFM_00326 1.7e-29 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GNAMLDFM_00327 1.9e-144 atpB C it plays a direct role in the translocation of protons across the membrane
GNAMLDFM_00328 2.3e-206 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
GNAMLDFM_00330 0.0 K RNA polymerase II activating transcription factor binding
GNAMLDFM_00331 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
GNAMLDFM_00332 2.8e-90 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
GNAMLDFM_00333 1.1e-96 mntP P Probably functions as a manganese efflux pump
GNAMLDFM_00334 1.1e-116
GNAMLDFM_00335 4e-139 KT Transcriptional regulatory protein, C terminal
GNAMLDFM_00336 5.7e-126 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GNAMLDFM_00337 2.7e-280 E Bacterial extracellular solute-binding proteins, family 5 Middle
GNAMLDFM_00338 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
GNAMLDFM_00339 0.0 S domain protein
GNAMLDFM_00340 1e-63 tyrA 5.4.99.5 E Chorismate mutase type II
GNAMLDFM_00341 5.4e-50 pabC 2.6.1.42, 4.1.3.38 EH Amino-transferase class IV
GNAMLDFM_00342 1.6e-35 L Helix-turn-helix domain
GNAMLDFM_00343 5.7e-21 L Helix-turn-helix domain
GNAMLDFM_00344 3.2e-131 rafA 3.2.1.22 G alpha-galactosidase
GNAMLDFM_00345 2.2e-114 araQ U Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00346 1.2e-120 lacF P Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00347 2.8e-153 araN G Bacterial extracellular solute-binding protein
GNAMLDFM_00348 5.1e-50 K helix_turn_helix, arabinose operon control protein
GNAMLDFM_00349 5.5e-116 L Transposase
GNAMLDFM_00350 1.3e-46 pabC 2.6.1.42, 4.1.3.38 EH Amino-transferase class IV
GNAMLDFM_00351 3.3e-291 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
GNAMLDFM_00352 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
GNAMLDFM_00353 3.3e-52 S Protein of unknown function (DUF2469)
GNAMLDFM_00354 4e-195 2.3.1.57 J Acetyltransferase (GNAT) domain
GNAMLDFM_00355 5.6e-283 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GNAMLDFM_00356 4.6e-288 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
GNAMLDFM_00357 4.1e-51 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GNAMLDFM_00358 3.3e-160 K Psort location Cytoplasmic, score
GNAMLDFM_00359 4.5e-178
GNAMLDFM_00360 5.4e-167 V ABC transporter
GNAMLDFM_00361 6.2e-155 spoU 2.1.1.185 J RNA methyltransferase TrmH family
GNAMLDFM_00362 1.6e-109 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GNAMLDFM_00363 1.6e-210 rmuC S RmuC family
GNAMLDFM_00364 9.6e-43 csoR S Metal-sensitive transcriptional repressor
GNAMLDFM_00365 0.0 pacS 1.9.3.1, 3.6.3.54 P E1-E2 ATPase
GNAMLDFM_00366 4e-117 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
GNAMLDFM_00368 2.7e-71 rplI J Binds to the 23S rRNA
GNAMLDFM_00369 2e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GNAMLDFM_00370 6.8e-76 ssb1 L Single-stranded DNA-binding protein
GNAMLDFM_00371 4.6e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
GNAMLDFM_00372 2.4e-11 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 M Aamy_C
GNAMLDFM_00373 1.2e-27 L Integrase core domain
GNAMLDFM_00374 1.4e-223 glf 5.4.99.9 M UDP-galactopyranose mutase
GNAMLDFM_00375 7.9e-101 cps1D M Domain of unknown function (DUF4422)
GNAMLDFM_00376 1.3e-37 L Transposase and inactivated derivatives IS30 family
GNAMLDFM_00377 5.7e-109 3.1.3.48 T Low molecular weight phosphatase family
GNAMLDFM_00378 2.8e-310 rfbP 2.7.8.6 M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
GNAMLDFM_00379 0.0 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
GNAMLDFM_00380 3.3e-281 EGP Major facilitator Superfamily
GNAMLDFM_00381 2.6e-231 mntH P H( )-stimulated, divalent metal cation uptake system
GNAMLDFM_00382 1.8e-150 S Domain of unknown function (DUF4143)
GNAMLDFM_00383 2.1e-140 L Protein of unknown function (DUF1524)
GNAMLDFM_00384 1.6e-165 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
GNAMLDFM_00385 3.6e-191 K helix_turn _helix lactose operon repressor
GNAMLDFM_00386 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GNAMLDFM_00387 1.1e-102 malC G Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00388 7.1e-261 G Bacterial extracellular solute-binding protein
GNAMLDFM_00389 5.2e-38 EGP Major facilitator Superfamily
GNAMLDFM_00390 0.0 cydD V ABC transporter transmembrane region
GNAMLDFM_00393 3.6e-55 araE EGP Major facilitator Superfamily
GNAMLDFM_00394 0.0 fadD 6.2.1.3 I AMP-binding enzyme
GNAMLDFM_00395 3.6e-210 K helix_turn _helix lactose operon repressor
GNAMLDFM_00396 1e-159 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GNAMLDFM_00397 7.2e-164 lepB 3.4.21.89 U Belongs to the peptidase S26 family
GNAMLDFM_00398 1.5e-59 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
GNAMLDFM_00399 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00400 5.3e-259 abcT3 P ATPases associated with a variety of cellular activities
GNAMLDFM_00401 0.0 pgi 5.3.1.9 G Belongs to the GPI family
GNAMLDFM_00404 2.4e-176 S Auxin Efflux Carrier
GNAMLDFM_00405 6.6e-126 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GNAMLDFM_00406 7e-144 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
GNAMLDFM_00407 1.5e-247 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GNAMLDFM_00408 4.5e-117
GNAMLDFM_00409 6.3e-78 soxR K MerR, DNA binding
GNAMLDFM_00410 1.9e-197 yghZ C Aldo/keto reductase family
GNAMLDFM_00411 1.4e-47 S Protein of unknown function (DUF3039)
GNAMLDFM_00412 4.3e-86 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GNAMLDFM_00413 6.3e-76
GNAMLDFM_00414 7.6e-117 yceD S Uncharacterized ACR, COG1399
GNAMLDFM_00415 9.3e-21 rpmF J Belongs to the bacterial ribosomal protein bL32 family
GNAMLDFM_00416 6.3e-134 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
GNAMLDFM_00417 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
GNAMLDFM_00418 1.5e-92 ilvN 2.2.1.6 E ACT domain
GNAMLDFM_00419 3.9e-44 stbC S Plasmid stability protein
GNAMLDFM_00420 7.8e-73 vapC S Toxic component of a toxin-antitoxin (TA) module. An RNase
GNAMLDFM_00421 0.0 yjjK S ABC transporter
GNAMLDFM_00422 7.1e-137 guaA1 6.3.5.2 F Peptidase C26
GNAMLDFM_00423 0.0 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
GNAMLDFM_00424 2.3e-162 P Cation efflux family
GNAMLDFM_00425 9e-266 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GNAMLDFM_00426 4.2e-213 S Endonuclease/Exonuclease/phosphatase family
GNAMLDFM_00427 7e-62 rpsP J Belongs to the bacterial ribosomal protein bS16 family
GNAMLDFM_00428 1e-34 CP_0960 S Belongs to the UPF0109 family
GNAMLDFM_00429 6.4e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GNAMLDFM_00430 1.9e-200 iunH1 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
GNAMLDFM_00431 4.1e-169 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
GNAMLDFM_00432 3.1e-20
GNAMLDFM_00433 4.4e-58 S Predicted membrane protein (DUF2207)
GNAMLDFM_00434 8.2e-59 S Predicted membrane protein (DUF2207)
GNAMLDFM_00435 9.9e-12 S Predicted membrane protein (DUF2207)
GNAMLDFM_00436 0.0 S Predicted membrane protein (DUF2207)
GNAMLDFM_00437 1.3e-89 lemA S LemA family
GNAMLDFM_00439 2.1e-13 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
GNAMLDFM_00440 5.2e-292 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GNAMLDFM_00441 6.9e-192 V Acetyltransferase (GNAT) domain
GNAMLDFM_00442 1.1e-44 V Acetyltransferase (GNAT) domain
GNAMLDFM_00443 0.0 smc D Required for chromosome condensation and partitioning
GNAMLDFM_00444 3.4e-302 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
GNAMLDFM_00445 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
GNAMLDFM_00446 3.1e-95 3.6.1.55 F NUDIX domain
GNAMLDFM_00447 6.1e-246 nagA 3.5.1.25 G Amidohydrolase family
GNAMLDFM_00448 1.8e-150 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GNAMLDFM_00449 1.5e-208 GK ROK family
GNAMLDFM_00450 2.2e-165 2.7.1.2 GK ROK family
GNAMLDFM_00452 5e-221 GK ROK family
GNAMLDFM_00453 2.3e-167 2.7.1.4 G pfkB family carbohydrate kinase
GNAMLDFM_00454 9.5e-44 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GNAMLDFM_00455 7e-15
GNAMLDFM_00456 8.1e-172 ftsQ 6.3.2.4 D Cell division protein FtsQ
GNAMLDFM_00457 7.5e-283 murC 6.3.2.8 M Belongs to the MurCDEF family
GNAMLDFM_00458 1.1e-217 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GNAMLDFM_00459 1.5e-225 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
GNAMLDFM_00460 4.3e-272 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GNAMLDFM_00461 1.7e-204 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GNAMLDFM_00462 2e-240 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
GNAMLDFM_00463 2.6e-155 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GNAMLDFM_00464 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
GNAMLDFM_00465 1.3e-65 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
GNAMLDFM_00466 1.8e-190 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
GNAMLDFM_00467 1.3e-93 mraZ K Belongs to the MraZ family
GNAMLDFM_00468 0.0 L DNA helicase
GNAMLDFM_00469 7.5e-230 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
GNAMLDFM_00470 8.4e-78 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GNAMLDFM_00471 7.4e-46 M Lysin motif
GNAMLDFM_00472 8.4e-128 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GNAMLDFM_00473 4.1e-162 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GNAMLDFM_00474 1.5e-175 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
GNAMLDFM_00475 6.9e-273 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GNAMLDFM_00476 3.4e-123 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
GNAMLDFM_00477 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
GNAMLDFM_00478 1.9e-217 EGP Major facilitator Superfamily
GNAMLDFM_00479 2.1e-265 glnA2 6.3.1.2 E glutamine synthetase
GNAMLDFM_00480 1.6e-279 S Uncharacterized protein conserved in bacteria (DUF2252)
GNAMLDFM_00481 8.3e-131 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
GNAMLDFM_00482 3.4e-120 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
GNAMLDFM_00483 2.3e-99
GNAMLDFM_00484 2.7e-111 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
GNAMLDFM_00485 1.8e-220 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
GNAMLDFM_00486 1.1e-253 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
GNAMLDFM_00487 1.1e-53 acyP 3.6.1.7 C Acylphosphatase
GNAMLDFM_00488 2.2e-156 yvgN 1.1.1.346 S Aldo/keto reductase family
GNAMLDFM_00489 0.0 3.2.1.51 GH95 G Glycosyl hydrolase family 65, N-terminal domain
GNAMLDFM_00490 7.7e-163 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
GNAMLDFM_00491 4.1e-111 S Amidohydrolase
GNAMLDFM_00492 5.8e-146 IQ KR domain
GNAMLDFM_00493 6.8e-245 4.2.1.68 M Enolase C-terminal domain-like
GNAMLDFM_00494 4.4e-266 G Bacterial extracellular solute-binding protein
GNAMLDFM_00495 1.1e-175 P Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00496 1.1e-156 P Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00497 2.6e-85 K Bacterial regulatory proteins, lacI family
GNAMLDFM_00498 8.1e-36 K Bacterial regulatory proteins, lacI family
GNAMLDFM_00500 6.5e-12 S Psort location Extracellular, score 8.82
GNAMLDFM_00501 5e-84 L Transposase and inactivated derivatives IS30 family
GNAMLDFM_00502 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
GNAMLDFM_00503 8e-174 3.4.22.70 M Sortase family
GNAMLDFM_00504 0.0 M domain protein
GNAMLDFM_00505 0.0 M cell wall anchor domain protein
GNAMLDFM_00507 1.5e-186 K Psort location Cytoplasmic, score
GNAMLDFM_00508 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
GNAMLDFM_00509 3.7e-204 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
GNAMLDFM_00510 2.4e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
GNAMLDFM_00511 1.8e-251 yhjE EGP Sugar (and other) transporter
GNAMLDFM_00512 3.7e-180 K helix_turn _helix lactose operon repressor
GNAMLDFM_00513 1.7e-277 scrT G Transporter major facilitator family protein
GNAMLDFM_00514 4.1e-297 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
GNAMLDFM_00515 6e-202 K helix_turn _helix lactose operon repressor
GNAMLDFM_00516 7.2e-51 natB E Receptor family ligand binding region
GNAMLDFM_00517 8.7e-58 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GNAMLDFM_00518 4.4e-141 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GNAMLDFM_00519 4.5e-280 clcA P Voltage gated chloride channel
GNAMLDFM_00520 2e-244 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GNAMLDFM_00521 2.4e-195 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
GNAMLDFM_00522 1.2e-166 yicL EG EamA-like transporter family
GNAMLDFM_00524 9.9e-169 htpX O Belongs to the peptidase M48B family
GNAMLDFM_00525 1e-276 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
GNAMLDFM_00526 0.0 cadA P E1-E2 ATPase
GNAMLDFM_00527 1.4e-228 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
GNAMLDFM_00528 1e-259 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
GNAMLDFM_00530 8.3e-146 yplQ S Haemolysin-III related
GNAMLDFM_00531 3.7e-88 yjcF Q Acetyltransferase (GNAT) domain
GNAMLDFM_00532 3.5e-52 ybjQ S Putative heavy-metal-binding
GNAMLDFM_00533 3.4e-166 dcm 2.1.1.37 L Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
GNAMLDFM_00534 3e-125 S Domain of unknown function (DUF4928)
GNAMLDFM_00535 1.2e-173 L Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
GNAMLDFM_00536 2.1e-259 L Z1 domain
GNAMLDFM_00537 3.4e-32 S Putative PD-(D/E)XK family member, (DUF4420)
GNAMLDFM_00538 1e-32 S Putative PD-(D/E)XK family member, (DUF4420)
GNAMLDFM_00539 2.3e-241 S AIPR protein
GNAMLDFM_00540 1e-175 dcm 2.1.1.37 H C-5 cytosine-specific DNA methylase
GNAMLDFM_00541 8.3e-164 M Glycosyltransferase like family 2
GNAMLDFM_00542 8.8e-198 S Fic/DOC family
GNAMLDFM_00543 1.1e-130 S Pyridoxamine 5'-phosphate oxidase
GNAMLDFM_00544 6.9e-200 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GNAMLDFM_00545 0.0 lysX S Uncharacterised conserved protein (DUF2156)
GNAMLDFM_00546 4.3e-253 S Putative esterase
GNAMLDFM_00547 7.1e-20
GNAMLDFM_00548 7.2e-170 yddG EG EamA-like transporter family
GNAMLDFM_00549 3.4e-91 hsp20 O Hsp20/alpha crystallin family
GNAMLDFM_00550 2.9e-212 pldB 3.1.1.5 I Serine aminopeptidase, S33
GNAMLDFM_00551 0.0 4.2.1.53 S MCRA family
GNAMLDFM_00552 1e-167 dkgA 1.1.1.346 C Aldo/keto reductase family
GNAMLDFM_00553 5.3e-68 yneG S Domain of unknown function (DUF4186)
GNAMLDFM_00554 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
GNAMLDFM_00555 2.4e-200 K WYL domain
GNAMLDFM_00556 9e-178 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
GNAMLDFM_00557 1.6e-89 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GNAMLDFM_00558 4.9e-20 tccB2 V DivIVA protein
GNAMLDFM_00559 4.9e-45 yggT S YGGT family
GNAMLDFM_00560 6.6e-68 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
GNAMLDFM_00561 1.2e-211 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GNAMLDFM_00562 2.8e-248 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GNAMLDFM_00563 3.3e-296 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
GNAMLDFM_00564 1e-157 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
GNAMLDFM_00565 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
GNAMLDFM_00566 1.6e-227 O AAA domain (Cdc48 subfamily)
GNAMLDFM_00567 1e-140 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
GNAMLDFM_00568 4.7e-61 S Thiamine-binding protein
GNAMLDFM_00569 7.1e-248 ydjK G Sugar (and other) transporter
GNAMLDFM_00570 8.3e-215 2.7.13.3 T Histidine kinase
GNAMLDFM_00571 6.1e-123 K helix_turn_helix, Lux Regulon
GNAMLDFM_00572 1.3e-190
GNAMLDFM_00573 6.6e-257 O SERine Proteinase INhibitors
GNAMLDFM_00574 1.8e-195 K helix_turn _helix lactose operon repressor
GNAMLDFM_00575 6.2e-241 lacY P LacY proton/sugar symporter
GNAMLDFM_00576 3e-303 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
GNAMLDFM_00577 3.2e-141 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
GNAMLDFM_00578 2.5e-149 C Putative TM nitroreductase
GNAMLDFM_00579 6.4e-198 S Glycosyltransferase, group 2 family protein
GNAMLDFM_00580 1.3e-93 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GNAMLDFM_00581 0.0 ecfA GP ABC transporter, ATP-binding protein
GNAMLDFM_00582 3.1e-47 yhbY J CRS1_YhbY
GNAMLDFM_00583 1.6e-53 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
GNAMLDFM_00584 6.9e-52
GNAMLDFM_00585 3.8e-187 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
GNAMLDFM_00586 5.5e-251 EGP Major facilitator Superfamily
GNAMLDFM_00587 2.1e-34 mtrB 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
GNAMLDFM_00588 6.9e-11 KT Transcriptional regulatory protein, C terminal
GNAMLDFM_00589 7.5e-250 rarA L Recombination factor protein RarA
GNAMLDFM_00590 0.0 helY L DEAD DEAH box helicase
GNAMLDFM_00591 1.5e-197 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
GNAMLDFM_00592 3.5e-285 ydfD EK Alanine-glyoxylate amino-transferase
GNAMLDFM_00593 5.1e-111 argO S LysE type translocator
GNAMLDFM_00594 9.9e-291 phoN I PAP2 superfamily
GNAMLDFM_00595 1.2e-194 gluD E Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00596 3.4e-110 gluC E Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00597 1.1e-144 gluB ET Belongs to the bacterial solute-binding protein 3 family
GNAMLDFM_00598 7.6e-152 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
GNAMLDFM_00599 5.2e-101 S Aminoacyl-tRNA editing domain
GNAMLDFM_00600 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
GNAMLDFM_00601 4.3e-253 hisS 6.1.1.21 J Histidyl-tRNA synthetase
GNAMLDFM_00602 1.2e-210 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
GNAMLDFM_00603 0.0 3.1.3.5 F 5'-nucleotidase, C-terminal domain
GNAMLDFM_00604 1.7e-142 3.5.2.10 S Creatinine amidohydrolase
GNAMLDFM_00605 1.1e-228 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GNAMLDFM_00606 4.2e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
GNAMLDFM_00607 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
GNAMLDFM_00608 1.2e-183 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GNAMLDFM_00609 4.3e-132 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GNAMLDFM_00610 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GNAMLDFM_00611 1.4e-117 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
GNAMLDFM_00612 2.5e-124 apl 3.1.3.1 S SNARE associated Golgi protein
GNAMLDFM_00613 2.6e-286 arc O AAA ATPase forming ring-shaped complexes
GNAMLDFM_00614 1.8e-133 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GNAMLDFM_00615 5.8e-280 manR K PRD domain
GNAMLDFM_00616 2.6e-71 H Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GNAMLDFM_00617 4e-78 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GNAMLDFM_00618 2.1e-46 fruA 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
GNAMLDFM_00619 4.8e-162 G Phosphotransferase System
GNAMLDFM_00620 6.1e-134 alsE 5.1.3.1 G Ribulose-phosphate 3 epimerase family
GNAMLDFM_00621 0.0 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
GNAMLDFM_00622 8.9e-175 hisN 3.1.3.25 G Inositol monophosphatase family
GNAMLDFM_00624 1.5e-283 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
GNAMLDFM_00625 8.1e-42 hup L Belongs to the bacterial histone-like protein family
GNAMLDFM_00626 0.0 S Lysylphosphatidylglycerol synthase TM region
GNAMLDFM_00627 2.7e-277 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
GNAMLDFM_00628 2.9e-111 ykoE S ABC-type cobalt transport system, permease component
GNAMLDFM_00629 4.4e-254 S PGAP1-like protein
GNAMLDFM_00630 3.1e-56
GNAMLDFM_00631 2.5e-152 S von Willebrand factor (vWF) type A domain
GNAMLDFM_00632 8.8e-190 S von Willebrand factor (vWF) type A domain
GNAMLDFM_00633 2.6e-84
GNAMLDFM_00634 1.3e-163 S Protein of unknown function DUF58
GNAMLDFM_00635 1.4e-187 moxR S ATPase family associated with various cellular activities (AAA)
GNAMLDFM_00636 1.9e-132 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GNAMLDFM_00637 3.1e-84 S LytR cell envelope-related transcriptional attenuator
GNAMLDFM_00638 6.1e-38 K 'Cold-shock' DNA-binding domain
GNAMLDFM_00639 2.7e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
GNAMLDFM_00640 4.2e-33 S Proteins of 100 residues with WXG
GNAMLDFM_00641 5.1e-100
GNAMLDFM_00642 4.4e-132 KT Response regulator receiver domain protein
GNAMLDFM_00643 1.6e-309 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GNAMLDFM_00644 1.7e-66 cspB K 'Cold-shock' DNA-binding domain
GNAMLDFM_00645 9e-179 S Protein of unknown function (DUF3027)
GNAMLDFM_00646 5.4e-178 uspA T Belongs to the universal stress protein A family
GNAMLDFM_00647 0.0 clpC O ATPase family associated with various cellular activities (AAA)
GNAMLDFM_00648 5.7e-255 codA 3.5.4.1, 3.5.4.21 F Amidohydrolase family
GNAMLDFM_00649 1.4e-281 purR QT Purine catabolism regulatory protein-like family
GNAMLDFM_00651 4e-251 proP EGP Sugar (and other) transporter
GNAMLDFM_00652 6.6e-39 L Psort location Cytoplasmic, score 8.87
GNAMLDFM_00653 3.4e-50 S Appr-1'-p processing enzyme
GNAMLDFM_00654 7.1e-86 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GNAMLDFM_00655 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
GNAMLDFM_00656 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
GNAMLDFM_00657 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
GNAMLDFM_00658 3e-245 srrA1 G Bacterial extracellular solute-binding protein
GNAMLDFM_00659 4.3e-172 malC G Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00660 6.7e-156 lacG G Binding-protein-dependent transport system inner membrane component
GNAMLDFM_00661 1.9e-263 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
GNAMLDFM_00662 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
GNAMLDFM_00663 0.0 3.2.1.96 G Glycosyl hydrolase family 85
GNAMLDFM_00664 6e-205 K helix_turn _helix lactose operon repressor
GNAMLDFM_00665 6.1e-243 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
GNAMLDFM_00666 1.7e-256 S Metal-independent alpha-mannosidase (GH125)
GNAMLDFM_00667 1.1e-31
GNAMLDFM_00668 2.6e-129 C Putative TM nitroreductase
GNAMLDFM_00669 4.9e-168 EG EamA-like transporter family
GNAMLDFM_00670 2e-70 pdxH S Pfam:Pyridox_oxidase
GNAMLDFM_00671 2.9e-232 L ribosomal rna small subunit methyltransferase
GNAMLDFM_00672 5.4e-166 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
GNAMLDFM_00673 5.3e-170 corA P CorA-like Mg2+ transporter protein
GNAMLDFM_00674 2.3e-159 ET Bacterial periplasmic substrate-binding proteins
GNAMLDFM_00675 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
GNAMLDFM_00676 4.9e-81 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
GNAMLDFM_00677 2.6e-308 comE S Competence protein
GNAMLDFM_00678 9e-173 holA 2.7.7.7 L DNA polymerase III delta subunit
GNAMLDFM_00679 2.6e-87 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
GNAMLDFM_00680 1.9e-158 yeaZ 2.3.1.234 O Glycoprotease family
GNAMLDFM_00681 1.4e-104 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
GNAMLDFM_00682 6.2e-196 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GNAMLDFM_00684 0.0 V FtsX-like permease family
GNAMLDFM_00685 3.3e-124 V ABC transporter
GNAMLDFM_00686 7.7e-109 K Bacterial regulatory proteins, tetR family
GNAMLDFM_00687 1e-136 L PFAM Relaxase mobilization nuclease family protein
GNAMLDFM_00688 5.1e-142 S Fic/DOC family
GNAMLDFM_00693 9e-87 2.7.11.1 S HipA-like C-terminal domain
GNAMLDFM_00694 3.7e-18 L Belongs to the 'phage' integrase family
GNAMLDFM_00695 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
GNAMLDFM_00696 2e-129 fhaA T Protein of unknown function (DUF2662)
GNAMLDFM_00697 1e-74 fhaB T Inner membrane component of T3SS, cytoplasmic domain
GNAMLDFM_00698 1.8e-271 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
GNAMLDFM_00699 1e-277 rodA D Belongs to the SEDS family
GNAMLDFM_00700 4.5e-261 pbpA M penicillin-binding protein
GNAMLDFM_00701 1.3e-171 T Protein tyrosine kinase
GNAMLDFM_00702 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
GNAMLDFM_00703 2.9e-119 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
GNAMLDFM_00704 3.8e-229 srtA 3.4.22.70 M Sortase family
GNAMLDFM_00705 6.4e-107 S Bacterial protein of unknown function (DUF881)
GNAMLDFM_00706 7.5e-69 crgA D Involved in cell division
GNAMLDFM_00707 3e-120 gluP 3.4.21.105 S Rhomboid family
GNAMLDFM_00708 4.5e-35
GNAMLDFM_00709 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
GNAMLDFM_00710 3.7e-72 I Sterol carrier protein
GNAMLDFM_00711 2.5e-224 EGP Major Facilitator Superfamily
GNAMLDFM_00712 3.2e-209 2.7.13.3 T Histidine kinase
GNAMLDFM_00713 5.5e-113 K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
GNAMLDFM_00714 1.2e-38 S Protein of unknown function (DUF3073)
GNAMLDFM_00715 5.5e-203 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
GNAMLDFM_00716 3.3e-289 S Amidohydrolase family
GNAMLDFM_00717 3.2e-157 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
GNAMLDFM_00718 4e-44 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
GNAMLDFM_00719 0.0 yjjP S Threonine/Serine exporter, ThrE
GNAMLDFM_00720 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
GNAMLDFM_00721 1.9e-308 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
GNAMLDFM_00722 2.5e-92 S AAA domain
GNAMLDFM_00723 0.0 yliE T Putative diguanylate phosphodiesterase
GNAMLDFM_00724 2.3e-108 S Domain of unknown function (DUF4956)
GNAMLDFM_00725 7.4e-152 P VTC domain
GNAMLDFM_00726 3.1e-304 cotH M CotH kinase protein
GNAMLDFM_00727 2.1e-272 pelG S Putative exopolysaccharide Exporter (EPS-E)
GNAMLDFM_00728 4.5e-252 pelF GT4 M Domain of unknown function (DUF3492)
GNAMLDFM_00729 1.3e-14 pelF GT4 M Domain of unknown function (DUF3492)
GNAMLDFM_00730 0.0 S Uncharacterised protein conserved in bacteria (DUF2194)
GNAMLDFM_00731 5.7e-161
GNAMLDFM_00732 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
GNAMLDFM_00733 1.6e-127
GNAMLDFM_00734 8.5e-100
GNAMLDFM_00735 1.5e-19 S Psort location CytoplasmicMembrane, score
GNAMLDFM_00736 8e-94 rpoE4 K Sigma-70 region 2
GNAMLDFM_00737 4.6e-26 2.7.13.3 T Histidine kinase
GNAMLDFM_00738 1.4e-49 S Bacterial toxin of type II toxin-antitoxin system, YafQ
GNAMLDFM_00739 2.1e-39 relB L RelB antitoxin
GNAMLDFM_00740 2.5e-43 V MacB-like periplasmic core domain
GNAMLDFM_00741 3.3e-100 S Acetyltransferase (GNAT) domain
GNAMLDFM_00742 4.5e-25 S Uncharacterized protein conserved in bacteria (DUF2316)
GNAMLDFM_00743 1.5e-35 cefD 5.1.1.17 E Aminotransferase class-V
GNAMLDFM_00744 4e-14 cefD 5.1.1.17 E Aminotransferase, class V
GNAMLDFM_00745 3.5e-188 V VanZ like family
GNAMLDFM_00747 2.6e-258 mmuP E amino acid
GNAMLDFM_00748 6.3e-154 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
GNAMLDFM_00749 6.5e-133 S SOS response associated peptidase (SRAP)
GNAMLDFM_00750 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
GNAMLDFM_00751 4.6e-160 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
GNAMLDFM_00752 5.3e-186 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GNAMLDFM_00753 9.4e-113 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
GNAMLDFM_00754 9.9e-42 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
GNAMLDFM_00755 8.7e-156 hisG 2.4.2.17 F ATP phosphoribosyltransferase
GNAMLDFM_00756 7.3e-104 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GNAMLDFM_00757 3.9e-168 S Bacterial protein of unknown function (DUF881)
GNAMLDFM_00758 3.9e-35 sbp S Protein of unknown function (DUF1290)
GNAMLDFM_00759 2.2e-140 S Bacterial protein of unknown function (DUF881)
GNAMLDFM_00760 6.7e-75 garA T Inner membrane component of T3SS, cytoplasmic domain
GNAMLDFM_00761 1.1e-110 K helix_turn_helix, mercury resistance
GNAMLDFM_00762 1.5e-65
GNAMLDFM_00763 2.6e-35
GNAMLDFM_00764 1.1e-138 pgp 3.1.3.18 S HAD-hyrolase-like
GNAMLDFM_00765 5.1e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
GNAMLDFM_00766 0.0 helY L DEAD DEAH box helicase
GNAMLDFM_00767 6.8e-53
GNAMLDFM_00768 0.0 pafB K WYL domain
GNAMLDFM_00769 2.5e-291 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
GNAMLDFM_00770 1.6e-162 supH S Sucrose-6F-phosphate phosphohydrolase
GNAMLDFM_00772 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
GNAMLDFM_00773 4.5e-143 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GNAMLDFM_00774 4.7e-118 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GNAMLDFM_00775 4.1e-31
GNAMLDFM_00776 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
GNAMLDFM_00777 4.7e-233
GNAMLDFM_00778 2.9e-165 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
GNAMLDFM_00779 3.1e-223 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
GNAMLDFM_00780 3e-99 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GNAMLDFM_00781 3.6e-52 yajC U Preprotein translocase subunit
GNAMLDFM_00782 2e-197 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
GNAMLDFM_00783 2.7e-106 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
GNAMLDFM_00784 2.7e-100 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
GNAMLDFM_00785 2e-111 yebC K transcriptional regulatory protein
GNAMLDFM_00786 1.2e-111 hit 2.7.7.53 FG HIT domain
GNAMLDFM_00787 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GNAMLDFM_00793 1.5e-133 S PAC2 family
GNAMLDFM_00794 1.8e-156 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
GNAMLDFM_00795 9.6e-157 G Fructosamine kinase
GNAMLDFM_00796 6.8e-212 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
GNAMLDFM_00797 3.7e-191 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
GNAMLDFM_00798 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
GNAMLDFM_00799 3.6e-202 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
GNAMLDFM_00800 3.3e-234 brnQ U Component of the transport system for branched-chain amino acids
GNAMLDFM_00801 2.5e-185
GNAMLDFM_00802 1.2e-299 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
GNAMLDFM_00803 4.9e-159 S Sucrose-6F-phosphate phosphohydrolase
GNAMLDFM_00804 2.5e-175 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
GNAMLDFM_00805 2.7e-33 secG U Preprotein translocase SecG subunit
GNAMLDFM_00806 6e-146 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GNAMLDFM_00807 1e-218 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
GNAMLDFM_00808 3.5e-169 whiA K May be required for sporulation
GNAMLDFM_00809 1.1e-178 rapZ S Displays ATPase and GTPase activities
GNAMLDFM_00810 6.2e-190 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
GNAMLDFM_00811 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
GNAMLDFM_00812 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
GNAMLDFM_00813 5.5e-233 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
GNAMLDFM_00814 1.1e-89 XK27_08585 S Hypothetical bacterial integral membrane protein (Trep_Strep)
GNAMLDFM_00815 6.1e-21 G ATPases associated with a variety of cellular activities
GNAMLDFM_00816 1.2e-129 S Enoyl-(Acyl carrier protein) reductase
GNAMLDFM_00817 6.4e-301 ybiT S ABC transporter
GNAMLDFM_00818 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GNAMLDFM_00819 9.4e-123 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GNAMLDFM_00820 9.4e-172 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
GNAMLDFM_00821 2.4e-217 MA20_36090 S Psort location Cytoplasmic, score 8.87
GNAMLDFM_00822 9e-29
GNAMLDFM_00823 5e-125 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GNAMLDFM_00824 4e-181 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
GNAMLDFM_00825 6.9e-158 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
GNAMLDFM_00826 2.7e-174 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
GNAMLDFM_00827 9.1e-289 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
GNAMLDFM_00828 7e-74 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
GNAMLDFM_00829 1.6e-177 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
GNAMLDFM_00830 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
GNAMLDFM_00831 4.8e-187 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GNAMLDFM_00832 1.6e-162 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
GNAMLDFM_00833 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
GNAMLDFM_00835 5.8e-100 sixA 3.6.1.55 T Phosphoglycerate mutase family
GNAMLDFM_00836 9.4e-200 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
GNAMLDFM_00837 1.3e-133 S Phospholipase/Carboxylesterase
GNAMLDFM_00839 2e-140 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
GNAMLDFM_00840 9.3e-146 S phosphoesterase or phosphohydrolase
GNAMLDFM_00841 5e-90 S Appr-1'-p processing enzyme
GNAMLDFM_00842 1.5e-177 I alpha/beta hydrolase fold
GNAMLDFM_00843 4.4e-25
GNAMLDFM_00845 2.2e-82 L Transposase, Mutator family
GNAMLDFM_00846 1.2e-141
GNAMLDFM_00847 3.6e-94 bcp 1.11.1.15 O Redoxin
GNAMLDFM_00848 1e-156 S Sucrose-6F-phosphate phosphohydrolase
GNAMLDFM_00849 1.9e-158 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
GNAMLDFM_00850 7.3e-244 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
GNAMLDFM_00851 8.6e-81
GNAMLDFM_00852 0.0 S Glycosyl hydrolases related to GH101 family, GH129
GNAMLDFM_00853 0.0 E ABC transporter, substrate-binding protein, family 5
GNAMLDFM_00854 5.4e-44
GNAMLDFM_00856 1.4e-305 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
GNAMLDFM_00857 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
GNAMLDFM_00858 1.2e-191 K helix_turn _helix lactose operon repressor
GNAMLDFM_00860 4.1e-253 hemN H Involved in the biosynthesis of porphyrin-containing compound
GNAMLDFM_00861 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
GNAMLDFM_00862 5.8e-34 rpsT J Binds directly to 16S ribosomal RNA
GNAMLDFM_00863 8.8e-139 S UPF0126 domain
GNAMLDFM_00864 2.2e-141 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
GNAMLDFM_00865 1.6e-226 ilvE 2.6.1.42 E Amino-transferase class IV
GNAMLDFM_00866 2.7e-93 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
GNAMLDFM_00867 9.2e-234 yhjX EGP Major facilitator Superfamily
GNAMLDFM_00868 3.3e-232 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
GNAMLDFM_00869 3e-42 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
GNAMLDFM_00870 9e-204 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
GNAMLDFM_00871 0.0 fadD 6.2.1.3 I AMP-binding enzyme
GNAMLDFM_00872 2.8e-185 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GNAMLDFM_00873 4.3e-248 corC S CBS domain
GNAMLDFM_00874 4.7e-102 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GNAMLDFM_00875 2.7e-216 phoH T PhoH-like protein
GNAMLDFM_00876 4.4e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
GNAMLDFM_00877 6.8e-148 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
GNAMLDFM_00879 3.3e-166 spoU 2.1.1.185 J SpoU rRNA Methylase family
GNAMLDFM_00880 4.4e-241 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
GNAMLDFM_00881 3.2e-109 yitW S Iron-sulfur cluster assembly protein
GNAMLDFM_00882 4e-101 iscU C SUF system FeS assembly protein, NifU family
GNAMLDFM_00883 5.5e-239 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GNAMLDFM_00884 7e-144 sufC O FeS assembly ATPase SufC
GNAMLDFM_00885 7.3e-236 sufD O FeS assembly protein SufD
GNAMLDFM_00886 1.5e-291 sufB O FeS assembly protein SufB
GNAMLDFM_00887 4.5e-311 S L,D-transpeptidase catalytic domain
GNAMLDFM_00888 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
GNAMLDFM_00889 1.3e-94 K Psort location Cytoplasmic, score
GNAMLDFM_00890 2.2e-78 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
GNAMLDFM_00891 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
GNAMLDFM_00892 4.7e-216 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
GNAMLDFM_00893 1.8e-70 3.4.23.43 S Type IV leader peptidase family
GNAMLDFM_00894 1.1e-193 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GNAMLDFM_00895 2.7e-71 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GNAMLDFM_00896 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GNAMLDFM_00897 1.6e-35
GNAMLDFM_00898 2.3e-55 WQ51_05790 S Bacterial protein of unknown function (DUF948)
GNAMLDFM_00899 1.9e-129 pgm3 G Phosphoglycerate mutase family
GNAMLDFM_00900 1.2e-48 relB L RelB antitoxin
GNAMLDFM_00901 3e-65 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
GNAMLDFM_00902 1.2e-111 E Transglutaminase-like superfamily
GNAMLDFM_00903 1.5e-45 sdpI S SdpI/YhfL protein family
GNAMLDFM_00904 5.7e-70 3.5.4.5 F cytidine deaminase activity
GNAMLDFM_00905 1.3e-150 S Peptidase C26
GNAMLDFM_00906 1.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GNAMLDFM_00907 4.1e-151 lolD V ABC transporter
GNAMLDFM_00908 8.2e-216 V FtsX-like permease family
GNAMLDFM_00909 6.9e-63 S Domain of unknown function (DUF4418)
GNAMLDFM_00910 0.0 pcrA 3.6.4.12 L DNA helicase
GNAMLDFM_00911 1.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
GNAMLDFM_00912 3.7e-241 pbuX F Permease family
GNAMLDFM_00913 3.4e-45 S Protein of unknown function (DUF2975)
GNAMLDFM_00914 1.1e-152 I Serine aminopeptidase, S33
GNAMLDFM_00915 3.1e-162 M pfam nlp p60
GNAMLDFM_00916 1e-105 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
GNAMLDFM_00917 1.1e-110 3.4.13.21 E Peptidase family S51
GNAMLDFM_00918 1.9e-196
GNAMLDFM_00919 2e-47 E lipolytic protein G-D-S-L family
GNAMLDFM_00920 1e-281 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
GNAMLDFM_00921 3.6e-226 V ABC-2 family transporter protein
GNAMLDFM_00922 3.3e-220 V ABC-2 family transporter protein
GNAMLDFM_00923 5.1e-176 V ATPases associated with a variety of cellular activities
GNAMLDFM_00924 1.8e-10 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
GNAMLDFM_00925 1.1e-216 T Histidine kinase
GNAMLDFM_00926 1.8e-113 K helix_turn_helix, Lux Regulon
GNAMLDFM_00927 4.3e-112 MA20_27875 P Protein of unknown function DUF47
GNAMLDFM_00928 2.8e-188 pit P Phosphate transporter family
GNAMLDFM_00929 6.2e-254 nplT G Alpha amylase, catalytic domain
GNAMLDFM_00930 1.8e-308 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
GNAMLDFM_00931 4.2e-234 rutG F Permease family
GNAMLDFM_00932 1.4e-161 3.1.3.73 G Phosphoglycerate mutase family
GNAMLDFM_00933 1.5e-106 3.1.3.27 E haloacid dehalogenase-like hydrolase
GNAMLDFM_00934 6.2e-236 EGP Major facilitator Superfamily
GNAMLDFM_00936 1.4e-62 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GNAMLDFM_00937 8.3e-131 S Sulfite exporter TauE/SafE
GNAMLDFM_00938 2.4e-14 feoB P transporter of a GTP-driven Fe(2 ) uptake system
GNAMLDFM_00939 2.3e-24 xerH L Phage integrase family
GNAMLDFM_00941 0.0 topB 5.99.1.2 L DNA topoisomerase
GNAMLDFM_00942 6.6e-206 dcm 2.1.1.37 H Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
GNAMLDFM_00943 0.0 L Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
GNAMLDFM_00944 1.4e-267 hsdBM 2.1.1.72 L Eco57I restriction-modification methylase
GNAMLDFM_00945 3.8e-184 pstIR 2.1.1.72, 3.1.21.4 L BsuBI/PstI restriction endonuclease C-terminus
GNAMLDFM_00946 1.3e-224
GNAMLDFM_00948 1.4e-69 L Phage integrase family
GNAMLDFM_00949 2.9e-84 L Phage integrase family
GNAMLDFM_00950 9e-36 M Peptidase family M23
GNAMLDFM_00951 2.3e-256 G ABC transporter substrate-binding protein
GNAMLDFM_00952 6.7e-242 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
GNAMLDFM_00953 3.8e-207 guaB 1.1.1.205 F IMP dehydrogenase family protein
GNAMLDFM_00954 3.3e-91
GNAMLDFM_00955 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
GNAMLDFM_00956 1.7e-87 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GNAMLDFM_00957 4.1e-142 rpsB J Belongs to the universal ribosomal protein uS2 family
GNAMLDFM_00958 8.5e-143 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GNAMLDFM_00959 6.3e-134 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
GNAMLDFM_00960 2.6e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
GNAMLDFM_00961 2.4e-173 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
GNAMLDFM_00962 5.1e-223 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
GNAMLDFM_00963 1.2e-52 3.5.1.124 S DJ-1/PfpI family
GNAMLDFM_00964 7.9e-16 3.5.1.124 S DJ-1/PfpI family
GNAMLDFM_00965 3.9e-139 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
GNAMLDFM_00966 1.5e-70 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
GNAMLDFM_00967 5.4e-297 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
GNAMLDFM_00968 1.1e-91 yijF S Domain of unknown function (DUF1287)
GNAMLDFM_00969 6.5e-158 3.6.4.12
GNAMLDFM_00970 2.7e-73
GNAMLDFM_00971 1.9e-64 yeaO K Protein of unknown function, DUF488
GNAMLDFM_00973 2.3e-295 mmuP E amino acid
GNAMLDFM_00974 6.3e-20 G Major facilitator Superfamily
GNAMLDFM_00975 1.4e-41 2.6.1.76 EGP Major Facilitator Superfamily
GNAMLDFM_00976 3.1e-92 yidC U Membrane protein insertase, YidC Oxa1 family
GNAMLDFM_00977 2.9e-116 XK27_07525 3.6.1.55 F Hydrolase of X-linked nucleoside diphosphate N terminal
GNAMLDFM_00978 3e-31 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
GNAMLDFM_00979 5.4e-93
GNAMLDFM_00980 1.5e-22
GNAMLDFM_00981 2.5e-15 fic D Fic/DOC family
GNAMLDFM_00982 6.4e-122 V ATPases associated with a variety of cellular activities
GNAMLDFM_00983 4.6e-129
GNAMLDFM_00984 1.8e-102
GNAMLDFM_00985 4.3e-129 S EamA-like transporter family
GNAMLDFM_00986 2.6e-37
GNAMLDFM_00987 1.2e-46 S Protein of unknown function (DUF2089)
GNAMLDFM_00988 3.5e-90 ydaF_1 J Acetyltransferase (GNAT) domain
GNAMLDFM_00989 9.2e-95 K helix_turn_helix, Lux Regulon
GNAMLDFM_00990 1.5e-67 2.7.13.3 T Histidine kinase
GNAMLDFM_00991 5.6e-54 sdpI S SdpI/YhfL protein family
GNAMLDFM_00992 6e-99 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
GNAMLDFM_00993 1.6e-62 rplQ J Ribosomal protein L17
GNAMLDFM_00994 3.4e-183 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GNAMLDFM_00995 1.5e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GNAMLDFM_00996 9.5e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GNAMLDFM_00997 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
GNAMLDFM_00998 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GNAMLDFM_00999 1.1e-98 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
GNAMLDFM_01000 1.4e-245 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
GNAMLDFM_01001 8.1e-76 rplO J binds to the 23S rRNA
GNAMLDFM_01002 9.2e-26 rpmD J Ribosomal protein L30p/L7e
GNAMLDFM_01003 6.7e-96 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GNAMLDFM_01004 2.4e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GNAMLDFM_01005 1.6e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GNAMLDFM_01006 5.5e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GNAMLDFM_01007 9.2e-18 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GNAMLDFM_01008 7.5e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GNAMLDFM_01009 1.3e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GNAMLDFM_01010 6.6e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GNAMLDFM_01011 6.4e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GNAMLDFM_01012 4.1e-37 rpmC J Belongs to the universal ribosomal protein uL29 family
GNAMLDFM_01013 2.2e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GNAMLDFM_01014 1.7e-100 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GNAMLDFM_01015 5.7e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GNAMLDFM_01016 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GNAMLDFM_01017 1.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GNAMLDFM_01018 7.5e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
GNAMLDFM_01019 3.1e-116 rplD J Forms part of the polypeptide exit tunnel
GNAMLDFM_01020 8.7e-116 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GNAMLDFM_01021 8e-51 rpsJ J Involved in the binding of tRNA to the ribosomes
GNAMLDFM_01022 8.2e-137 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
GNAMLDFM_01023 4.3e-145 ywiC S YwiC-like protein
GNAMLDFM_01024 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
GNAMLDFM_01025 3.1e-170 rhaR_1 K helix_turn_helix, arabinose operon control protein
GNAMLDFM_01026 2.2e-193 Z012_01000 1.1.1.14, 1.1.1.9 C Zinc-binding dehydrogenase
GNAMLDFM_01027 2.7e-196 EGP Major facilitator Superfamily
GNAMLDFM_01028 1.6e-213 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
GNAMLDFM_01029 6e-75 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GNAMLDFM_01030 2.2e-233 EGP Major facilitator Superfamily
GNAMLDFM_01031 2.3e-179 tdh 1.1.1.14 C Zinc-binding dehydrogenase
GNAMLDFM_01032 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
GNAMLDFM_01033 3.7e-82 rpsI J Belongs to the universal ribosomal protein uS9 family
GNAMLDFM_01034 3.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GNAMLDFM_01035 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
GNAMLDFM_01036 8.4e-117
GNAMLDFM_01037 1.1e-110 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
GNAMLDFM_01038 5e-182 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GNAMLDFM_01039 1.7e-15 M Bacterial capsule synthesis protein PGA_cap
GNAMLDFM_01040 8.1e-39 M Bacterial capsule synthesis protein PGA_cap
GNAMLDFM_01041 5.7e-51 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
GNAMLDFM_01042 8.1e-31
GNAMLDFM_01043 4.1e-142
GNAMLDFM_01044 1.1e-65 S PrgI family protein
GNAMLDFM_01045 0.0 trsE U type IV secretory pathway VirB4
GNAMLDFM_01046 1e-258 isp2 3.2.1.96 M CHAP domain
GNAMLDFM_01047 2e-185
GNAMLDFM_01049 3.4e-65 S Putative amidase domain
GNAMLDFM_01050 1.5e-99 S Putative amidase domain
GNAMLDFM_01051 0.0 U Type IV secretory system Conjugative DNA transfer
GNAMLDFM_01052 6.6e-59
GNAMLDFM_01053 3.5e-46
GNAMLDFM_01054 9.9e-124
GNAMLDFM_01055 9.4e-259 ard S Antirestriction protein (ArdA)
GNAMLDFM_01056 7.1e-165
GNAMLDFM_01057 1.5e-161 S Protein of unknown function (DUF3801)
GNAMLDFM_01058 1.6e-271 rlx U Relaxase/Mobilisation nuclease domain
GNAMLDFM_01059 3.5e-70 S Bacterial mobilisation protein (MobC)
GNAMLDFM_01060 1.1e-84
GNAMLDFM_01061 1.3e-46
GNAMLDFM_01062 1.4e-265 K ParB-like nuclease domain
GNAMLDFM_01063 1.1e-107 S Domain of unknown function (DUF4192)
GNAMLDFM_01064 1.6e-233 T Histidine kinase
GNAMLDFM_01065 1.9e-124 K helix_turn_helix, Lux Regulon
GNAMLDFM_01066 1.9e-121 V ABC transporter
GNAMLDFM_01067 1.4e-17
GNAMLDFM_01068 4.1e-292 E Asparagine synthase
GNAMLDFM_01069 3.2e-35 E Asparagine synthase
GNAMLDFM_01070 2.7e-308 V ABC transporter transmembrane region
GNAMLDFM_01072 4.9e-164 spaB S Thiopeptide-type bacteriocin biosynthesis domain protein
GNAMLDFM_01073 5.4e-107 V Psort location Cytoplasmic, score
GNAMLDFM_01075 8.1e-116 V VanZ like family
GNAMLDFM_01076 5.3e-96 rpoE4 K Sigma-70 region 2
GNAMLDFM_01077 5.5e-22 S Psort location CytoplasmicMembrane, score
GNAMLDFM_01078 1.3e-25 cysB 4.2.1.22 EGP Major facilitator Superfamily
GNAMLDFM_01079 1e-42 cysB 4.2.1.22 EGP Major facilitator Superfamily
GNAMLDFM_01080 1e-11
GNAMLDFM_01081 1.6e-118 K Bacterial regulatory proteins, tetR family
GNAMLDFM_01082 3.5e-217 G Transmembrane secretion effector
GNAMLDFM_01083 5.4e-17 K addiction module antidote protein HigA
GNAMLDFM_01084 6.9e-242 S HipA-like C-terminal domain
GNAMLDFM_01085 1.3e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
GNAMLDFM_01086 7.4e-110 papP E Binding-protein-dependent transport system inner membrane component
GNAMLDFM_01087 1.2e-118 E Binding-protein-dependent transport system inner membrane component
GNAMLDFM_01088 1.2e-138 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
GNAMLDFM_01089 4.8e-154 cjaA ET Bacterial periplasmic substrate-binding proteins
GNAMLDFM_01090 1.4e-147 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GNAMLDFM_01091 1.2e-288 pip 3.4.11.5 S alpha/beta hydrolase fold
GNAMLDFM_01092 0.0 tcsS2 T Histidine kinase
GNAMLDFM_01093 1.1e-139 K helix_turn_helix, Lux Regulon
GNAMLDFM_01094 0.0 MV MacB-like periplasmic core domain
GNAMLDFM_01095 1.7e-168 V ABC transporter, ATP-binding protein
GNAMLDFM_01096 4.5e-252 metY 2.5.1.49 E Aminotransferase class-V
GNAMLDFM_01097 2.8e-165 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
GNAMLDFM_01098 4.7e-23 L Transposase and inactivated derivatives IS30 family
GNAMLDFM_01099 8.3e-75 yraN L Belongs to the UPF0102 family
GNAMLDFM_01100 9.8e-291 comM O Magnesium chelatase, subunit ChlI C-terminal
GNAMLDFM_01101 0.0 dprA 5.99.1.2 LU DNA recombination-mediator protein A
GNAMLDFM_01102 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
GNAMLDFM_01103 2.7e-182 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
GNAMLDFM_01104 2.1e-112 safC S O-methyltransferase
GNAMLDFM_01105 8.9e-167 fmt2 3.2.2.10 S Belongs to the LOG family
GNAMLDFM_01106 7.4e-221 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
GNAMLDFM_01107 4.4e-238 patB 4.4.1.8 E Aminotransferase, class I II
GNAMLDFM_01109 3.2e-253 S UPF0210 protein
GNAMLDFM_01110 6.4e-44 gcvR T Belongs to the UPF0237 family
GNAMLDFM_01111 1.4e-15 lmrB EGP Major facilitator Superfamily
GNAMLDFM_01112 1.3e-232 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
GNAMLDFM_01113 6.6e-253 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
GNAMLDFM_01114 6.3e-123 glpR K DeoR C terminal sensor domain
GNAMLDFM_01115 1.8e-228 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
GNAMLDFM_01116 1.8e-229 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
GNAMLDFM_01117 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
GNAMLDFM_01118 1.4e-130 glxR K helix_turn_helix, cAMP Regulatory protein
GNAMLDFM_01119 4e-212 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
GNAMLDFM_01120 2.7e-191 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
GNAMLDFM_01121 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
GNAMLDFM_01122 1.6e-224 S Uncharacterized conserved protein (DUF2183)
GNAMLDFM_01123 1.7e-69 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
GNAMLDFM_01124 1.3e-211 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
GNAMLDFM_01125 1.3e-159 mhpC I Alpha/beta hydrolase family
GNAMLDFM_01126 9.3e-121 F Domain of unknown function (DUF4916)
GNAMLDFM_01127 3.3e-59 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
GNAMLDFM_01128 5e-171 S G5
GNAMLDFM_01129 5.1e-129
GNAMLDFM_01130 7.6e-237 wcoI DM Psort location CytoplasmicMembrane, score
GNAMLDFM_01131 1.1e-69
GNAMLDFM_01132 1.2e-247 S Psort location CytoplasmicMembrane, score 9.99
GNAMLDFM_01133 1.8e-16 L Helix-turn-helix domain
GNAMLDFM_01134 6.4e-31 L PFAM Integrase catalytic
GNAMLDFM_01137 1.8e-36 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
GNAMLDFM_01138 4.2e-197 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
GNAMLDFM_01139 2.1e-131 cas4 3.1.12.1 L Domain of unknown function DUF83
GNAMLDFM_01140 8.7e-156 csd2 L CRISPR-associated protein Cas7
GNAMLDFM_01141 0.0 csd1 3.5.1.28 M CRISPR-associated protein (Cas_Csd1)
GNAMLDFM_01142 1.5e-137 cas5d S CRISPR-associated protein (Cas_Cas5)
GNAMLDFM_01143 0.0 cas3 L DEAD-like helicases superfamily
GNAMLDFM_01144 6.3e-61 L Transposase
GNAMLDFM_01145 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GNAMLDFM_01146 1.1e-135 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GNAMLDFM_01147 3.9e-169 EGP Major Facilitator Superfamily
GNAMLDFM_01148 6.8e-139 rihA_2 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
GNAMLDFM_01149 2.7e-135 rbsR K helix_turn _helix lactose operon repressor
GNAMLDFM_01150 0.0 V ABC transporter transmembrane region
GNAMLDFM_01151 0.0 V ABC transporter, ATP-binding protein
GNAMLDFM_01152 8.9e-90 K MarR family
GNAMLDFM_01153 2.1e-185 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
GNAMLDFM_01154 8.1e-138 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
GNAMLDFM_01155 1.4e-192 opcA G Glucose-6-phosphate dehydrogenase subunit
GNAMLDFM_01156 5e-303 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GNAMLDFM_01157 3.4e-290 3.5.2.6 V Beta-lactamase enzyme family
GNAMLDFM_01159 5.1e-300 pepD E Peptidase family C69
GNAMLDFM_01160 2.8e-196 XK27_01805 M Glycosyltransferase like family 2
GNAMLDFM_01161 1.4e-150 icaR K Bacterial regulatory proteins, tetR family
GNAMLDFM_01162 2.2e-171 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
GNAMLDFM_01163 1e-227 amt U Ammonium Transporter Family
GNAMLDFM_01164 1e-54 glnB K Nitrogen regulatory protein P-II
GNAMLDFM_01165 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
GNAMLDFM_01166 1.3e-238 dinF V MatE
GNAMLDFM_01167 3.1e-255 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
GNAMLDFM_01168 1e-257 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
GNAMLDFM_01169 3.5e-140 cobQ S CobB/CobQ-like glutamine amidotransferase domain
GNAMLDFM_01170 5.5e-38 S granule-associated protein
GNAMLDFM_01171 0.0 ubiB S ABC1 family
GNAMLDFM_01172 3.5e-71 K Periplasmic binding protein domain
GNAMLDFM_01173 1.2e-238 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
GNAMLDFM_01174 4.5e-155 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
GNAMLDFM_01175 1.3e-187 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GNAMLDFM_01176 2.1e-151 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
GNAMLDFM_01177 4.8e-45
GNAMLDFM_01178 1.1e-116 lacS G Psort location CytoplasmicMembrane, score 10.00
GNAMLDFM_01180 2e-120 V ATPases associated with a variety of cellular activities
GNAMLDFM_01181 2.2e-99
GNAMLDFM_01182 6.8e-81
GNAMLDFM_01183 3.2e-29 spaB S Lantibiotic dehydratase, C terminus
GNAMLDFM_01184 4.1e-18 V Lanthionine synthetase C-like protein
GNAMLDFM_01185 9.6e-41 V ATPase activity
GNAMLDFM_01186 4.9e-47 V ABC-2 type transporter
GNAMLDFM_01187 0.0 sprF 4.6.1.1 M Cell surface antigen C-terminus
GNAMLDFM_01189 7.8e-126 K Helix-turn-helix domain protein
GNAMLDFM_01190 5.2e-27
GNAMLDFM_01191 9.2e-71
GNAMLDFM_01192 1.7e-35
GNAMLDFM_01193 2.1e-103 parA D AAA domain
GNAMLDFM_01194 8e-83 S Transcription factor WhiB
GNAMLDFM_01195 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
GNAMLDFM_01196 1e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GNAMLDFM_01197 1.6e-107
GNAMLDFM_01198 5.5e-86
GNAMLDFM_01200 2.1e-277 M LPXTG cell wall anchor motif
GNAMLDFM_01201 0.0 1.3.98.1, 3.2.1.21 GH3 M Conserved repeat domain
GNAMLDFM_01202 1.1e-97
GNAMLDFM_01203 4.9e-11
GNAMLDFM_01205 2.8e-112 P Sodium/hydrogen exchanger family
GNAMLDFM_01206 9.2e-72 ams 2.4.1.4, 3.2.1.1, 5.4.99.16 GH13 G Alpha amylase, catalytic domain
GNAMLDFM_01207 1.9e-81 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
GNAMLDFM_01208 1.4e-89 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
GNAMLDFM_01209 4.7e-257 MA20_36090 S Psort location Cytoplasmic, score 8.87
GNAMLDFM_01210 1.9e-105 K Bacterial regulatory proteins, tetR family
GNAMLDFM_01211 3.8e-12 L Transposase DDE domain
GNAMLDFM_01212 2.1e-29 L Transposase DDE domain
GNAMLDFM_01213 3.1e-204 EGP Major Facilitator Superfamily
GNAMLDFM_01214 2.6e-230 S AAA domain
GNAMLDFM_01215 3.6e-18 L Tetratricopeptide repeat
GNAMLDFM_01216 2.6e-255 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GNAMLDFM_01217 9.1e-82 S Protein of unknown function (DUF975)
GNAMLDFM_01218 3.9e-139 S Putative ABC-transporter type IV
GNAMLDFM_01219 4.6e-102 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
GNAMLDFM_01220 3.3e-64 M1-798 P Rhodanese Homology Domain
GNAMLDFM_01221 5e-145 moeB 2.7.7.80 H ThiF family
GNAMLDFM_01222 1.8e-156 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
GNAMLDFM_01223 7.9e-28 thiS 2.8.1.10 H ThiS family
GNAMLDFM_01224 3e-281 argH 4.3.2.1 E argininosuccinate lyase
GNAMLDFM_01225 1.2e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
GNAMLDFM_01226 5.9e-83 argR K Regulates arginine biosynthesis genes
GNAMLDFM_01227 3.9e-184 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GNAMLDFM_01228 1.3e-248 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
GNAMLDFM_01229 8.2e-179 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
GNAMLDFM_01230 2.6e-211 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
GNAMLDFM_01231 3e-201 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
GNAMLDFM_01232 4.8e-93
GNAMLDFM_01233 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
GNAMLDFM_01234 5e-201 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GNAMLDFM_01235 7.9e-160 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GNAMLDFM_01236 1.8e-162 cbiQ P Cobalt transport protein
GNAMLDFM_01237 7e-278 ykoD P ATPases associated with a variety of cellular activities
GNAMLDFM_01238 1.8e-107 ykoE S ABC-type cobalt transport system, permease component
GNAMLDFM_01239 4.4e-258 argE E Peptidase dimerisation domain
GNAMLDFM_01240 2e-101 S Protein of unknown function (DUF3043)
GNAMLDFM_01241 7.6e-272 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GNAMLDFM_01242 8.6e-142 S Domain of unknown function (DUF4191)
GNAMLDFM_01243 2.3e-281 glnA 6.3.1.2 E glutamine synthetase
GNAMLDFM_01244 8.1e-202 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
GNAMLDFM_01245 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GNAMLDFM_01246 0.0 S Tetratricopeptide repeat
GNAMLDFM_01247 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
GNAMLDFM_01248 1e-18 2.8.2.22 S Arylsulfotransferase Ig-like domain
GNAMLDFM_01249 3.7e-140 bioM P ATPases associated with a variety of cellular activities
GNAMLDFM_01250 1.4e-223 E Aminotransferase class I and II
GNAMLDFM_01251 1.5e-189 P NMT1/THI5 like
GNAMLDFM_01252 3.8e-134 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
GNAMLDFM_01253 3.1e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GNAMLDFM_01254 8.5e-128 recO L Involved in DNA repair and RecF pathway recombination
GNAMLDFM_01255 0.0 I acetylesterase activity
GNAMLDFM_01256 5.3e-231 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
GNAMLDFM_01257 1.7e-221 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
GNAMLDFM_01258 1e-205 2.7.11.1 NU Tfp pilus assembly protein FimV
GNAMLDFM_01260 1.6e-73 S Protein of unknown function (DUF3052)
GNAMLDFM_01261 1.7e-157 lon T Belongs to the peptidase S16 family
GNAMLDFM_01262 3.1e-293 S Zincin-like metallopeptidase
GNAMLDFM_01263 3.8e-290 uvrD2 3.6.4.12 L DNA helicase
GNAMLDFM_01264 5.5e-300 mphA S Aminoglycoside phosphotransferase
GNAMLDFM_01265 4.7e-32 S Protein of unknown function (DUF3107)
GNAMLDFM_01266 1.5e-169 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
GNAMLDFM_01267 3.8e-128 S Vitamin K epoxide reductase
GNAMLDFM_01268 6e-171 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
GNAMLDFM_01269 5.7e-149 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
GNAMLDFM_01270 2.9e-159 S Patatin-like phospholipase
GNAMLDFM_01271 5.1e-59 S Domain of unknown function (DUF4143)
GNAMLDFM_01272 7.2e-116 XK27_08050 O prohibitin homologues
GNAMLDFM_01273 2.7e-08 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
GNAMLDFM_01274 1.2e-41 XAC3035 O Glutaredoxin
GNAMLDFM_01275 2.6e-233 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
GNAMLDFM_01276 7.9e-126 ypfH S Phospholipase/Carboxylesterase
GNAMLDFM_01277 0.0 tetP J Elongation factor G, domain IV
GNAMLDFM_01279 3.7e-136 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
GNAMLDFM_01280 2.4e-104 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
GNAMLDFM_01281 5.7e-169 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
GNAMLDFM_01282 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
GNAMLDFM_01283 2.2e-240 carA 6.3.5.5 F Belongs to the CarA family
GNAMLDFM_01284 1.5e-92 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GNAMLDFM_01285 3.9e-104 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GNAMLDFM_01286 1.4e-127 ybbL V ATPases associated with a variety of cellular activities
GNAMLDFM_01287 7.1e-136 ybbM V Uncharacterised protein family (UPF0014)
GNAMLDFM_01288 0.0 T Diguanylate cyclase, GGDEF domain
GNAMLDFM_01289 9.1e-253 3.2.1.14 GH18 S Carbohydrate binding domain
GNAMLDFM_01290 0.0 M probably involved in cell wall
GNAMLDFM_01292 7.4e-48 4.1.1.44 L Cupin 2, conserved barrel domain protein
GNAMLDFM_01293 1.6e-183 S Membrane transport protein
GNAMLDFM_01294 2.4e-40 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
GNAMLDFM_01295 5.7e-110 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
GNAMLDFM_01297 5.1e-122 magIII L endonuclease III
GNAMLDFM_01298 5.7e-242 vbsD V MatE
GNAMLDFM_01299 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
GNAMLDFM_01300 3.8e-138 K LysR substrate binding domain
GNAMLDFM_01301 9.5e-216 EGP Major Facilitator Superfamily
GNAMLDFM_01302 7.3e-156 K LysR substrate binding domain
GNAMLDFM_01303 9.9e-217 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
GNAMLDFM_01305 9.2e-144 K helix_turn _helix lactose operon repressor
GNAMLDFM_01306 0.0 3.2.1.25 G beta-mannosidase
GNAMLDFM_01307 2.7e-138 dppF E ABC transporter
GNAMLDFM_01308 5e-141 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
GNAMLDFM_01309 5.3e-155 EP Binding-protein-dependent transport system inner membrane component
GNAMLDFM_01310 1.3e-174 EP Binding-protein-dependent transport system inner membrane component
GNAMLDFM_01311 1.7e-299 E Bacterial extracellular solute-binding proteins, family 5 Middle
GNAMLDFM_01312 1.1e-237 bglA 3.2.1.21 G Glycosyl hydrolase family 1
GNAMLDFM_01313 4.2e-147 E GDSL-like Lipase/Acylhydrolase family
GNAMLDFM_01314 7.1e-174 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
GNAMLDFM_01315 2.7e-77 KT Transcriptional regulatory protein, C terminal
GNAMLDFM_01316 7.9e-35
GNAMLDFM_01317 1.1e-253 S Domain of unknown function (DUF4143)
GNAMLDFM_01318 1.1e-197 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
GNAMLDFM_01319 1.8e-75 K MerR family regulatory protein
GNAMLDFM_01320 8.4e-88 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GNAMLDFM_01321 7.3e-59 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GNAMLDFM_01322 2.9e-30 S Psort location CytoplasmicMembrane, score
GNAMLDFM_01324 1e-185 MA20_14895 S Conserved hypothetical protein 698
GNAMLDFM_01325 3e-145 rlrG K Bacterial regulatory helix-turn-helix protein, lysR family
GNAMLDFM_01326 1e-128 tmp1 S Domain of unknown function (DUF4391)
GNAMLDFM_01327 6.2e-232 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GNAMLDFM_01328 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GNAMLDFM_01329 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
GNAMLDFM_01330 9.3e-62 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GNAMLDFM_01331 6.6e-111 yocS S SBF-like CPA transporter family (DUF4137)
GNAMLDFM_01333 2.3e-195 ltaE 4.1.2.48 E Beta-eliminating lyase
GNAMLDFM_01334 2.2e-218 M Glycosyl transferase 4-like domain
GNAMLDFM_01335 1.1e-87 mtnE 2.6.1.83 E Aminotransferase class I and II
GNAMLDFM_01336 1.3e-249 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GNAMLDFM_01337 7.3e-121 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GNAMLDFM_01338 6.5e-116 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GNAMLDFM_01339 3.4e-59
GNAMLDFM_01340 2.4e-243 clcA_2 P Voltage gated chloride channel
GNAMLDFM_01341 4.4e-234 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
GNAMLDFM_01342 3.4e-252 rnd 3.1.13.5 J 3'-5' exonuclease
GNAMLDFM_01343 1.4e-118 S Protein of unknown function (DUF3000)
GNAMLDFM_01344 8.7e-175 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GNAMLDFM_01345 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
GNAMLDFM_01346 1e-37
GNAMLDFM_01347 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
GNAMLDFM_01348 4.1e-225 S Peptidase dimerisation domain
GNAMLDFM_01349 7.4e-113 metI P Binding-protein-dependent transport system inner membrane component
GNAMLDFM_01350 1.4e-220 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GNAMLDFM_01351 5.1e-176 metQ P NLPA lipoprotein
GNAMLDFM_01352 5.6e-158 S Sucrose-6F-phosphate phosphohydrolase
GNAMLDFM_01354 1.6e-65 L Helix-turn-helix domain
GNAMLDFM_01355 6.9e-14 L PFAM Integrase catalytic
GNAMLDFM_01356 7.9e-87
GNAMLDFM_01357 8.8e-67
GNAMLDFM_01358 5.6e-48 L Transposase, Mutator family
GNAMLDFM_01359 1.3e-89 L Transposase
GNAMLDFM_01360 1.5e-43 L Psort location Cytoplasmic, score
GNAMLDFM_01361 2.4e-103 K Transposase IS116 IS110 IS902
GNAMLDFM_01362 4.5e-66 L PFAM Integrase catalytic
GNAMLDFM_01363 5.2e-211 L PFAM Integrase catalytic
GNAMLDFM_01364 1.4e-131 L IstB-like ATP binding protein
GNAMLDFM_01365 2.1e-24 L PFAM Integrase catalytic
GNAMLDFM_01366 1.4e-49 L Transposase
GNAMLDFM_01367 9.3e-176 5.1.3.37 P Domain of unknown function (DUF4143)
GNAMLDFM_01368 1.7e-59 L IstB-like ATP binding protein
GNAMLDFM_01369 4.9e-70 L IstB-like ATP binding protein
GNAMLDFM_01370 2.4e-20 EGP Transmembrane secretion effector
GNAMLDFM_01371 1.1e-251 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
GNAMLDFM_01372 2.8e-243 nagA 3.5.1.25 G Amidohydrolase family
GNAMLDFM_01373 1.2e-146 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GNAMLDFM_01374 3.1e-173 2.7.1.2 GK ROK family
GNAMLDFM_01375 5.5e-217 GK ROK family
GNAMLDFM_01376 2.4e-158 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
GNAMLDFM_01377 1.4e-251 gtr U Sugar (and other) transporter
GNAMLDFM_01378 2.1e-311 P Domain of unknown function (DUF4976)
GNAMLDFM_01379 1.2e-271 aslB C Iron-sulfur cluster-binding domain
GNAMLDFM_01380 4.6e-106 S Sulfite exporter TauE/SafE
GNAMLDFM_01381 5.9e-53 L Helix-turn-helix domain
GNAMLDFM_01382 2.7e-134 3.1.3.85 G Phosphoglycerate mutase family
GNAMLDFM_01383 6.5e-66 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
GNAMLDFM_01384 3e-262 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GNAMLDFM_01385 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
GNAMLDFM_01386 1.1e-300 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
GNAMLDFM_01387 3.7e-16
GNAMLDFM_01389 5.2e-28
GNAMLDFM_01390 4.6e-70 S Putative DNA-binding domain
GNAMLDFM_01391 9.1e-107 pepE 3.4.13.21 E Belongs to the peptidase S51 family
GNAMLDFM_01393 4.1e-18 L Helix-turn-helix domain
GNAMLDFM_01394 1.1e-180 C Polysaccharide pyruvyl transferase
GNAMLDFM_01395 2.2e-132 GT2 M Glycosyltransferase like family 2
GNAMLDFM_01396 2.8e-148 1.13.11.79 C Psort location Cytoplasmic, score 8.87
GNAMLDFM_01397 6.1e-175 wbbI M transferase activity, transferring glycosyl groups
GNAMLDFM_01398 4.2e-222 S Psort location CytoplasmicMembrane, score 9.99
GNAMLDFM_01399 2.4e-27 S Psort location CytoplasmicMembrane, score 9.99
GNAMLDFM_01400 8.6e-155 S Glycosyl transferase family 2
GNAMLDFM_01401 9.2e-26 cps1D M Domain of unknown function (DUF4422)
GNAMLDFM_01402 2.2e-19 cps1D M Domain of unknown function (DUF4422)
GNAMLDFM_01403 1.6e-32 L Psort location Cytoplasmic, score 8.87
GNAMLDFM_01404 1e-87 L IstB-like ATP binding protein
GNAMLDFM_01405 2.4e-50 L Transposase and inactivated derivatives IS30 family
GNAMLDFM_01406 2.5e-218 L Transposase, Mutator family
GNAMLDFM_01407 2.2e-51 S Phage derived protein Gp49-like (DUF891)
GNAMLDFM_01408 3.3e-38 K Addiction module
GNAMLDFM_01410 5e-80 ybfG M Domain of unknown function (DUF1906)
GNAMLDFM_01411 7e-153 P Belongs to the ABC transporter superfamily
GNAMLDFM_01412 2.1e-88 appC EP PFAM binding-protein-dependent transport systems inner membrane component
GNAMLDFM_01413 4.7e-121 appB P PFAM binding-protein-dependent transport systems inner membrane component
GNAMLDFM_01414 3.4e-191 oppA5 E family 5
GNAMLDFM_01415 3.1e-22 trxB1 1.8.1.9 C Thioredoxin domain
GNAMLDFM_01416 3.3e-68 trxB1 1.8.1.9 C Thioredoxin domain
GNAMLDFM_01417 2.6e-194 K Psort location Cytoplasmic, score
GNAMLDFM_01418 4.2e-144 traX S TraX protein
GNAMLDFM_01419 3.1e-173 S HAD-hyrolase-like
GNAMLDFM_01420 0.0 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
GNAMLDFM_01421 2.6e-161 malG G Binding-protein-dependent transport system inner membrane component
GNAMLDFM_01422 2.4e-251 malF G Binding-protein-dependent transport system inner membrane component
GNAMLDFM_01423 1.3e-232 malE G Bacterial extracellular solute-binding protein
GNAMLDFM_01424 3.2e-166 malL 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
GNAMLDFM_01425 4.7e-103 insK L Integrase core domain
GNAMLDFM_01426 1.1e-30 S AAA domain, putative AbiEii toxin, Type IV TA system
GNAMLDFM_01427 4.8e-39 S AAA domain, putative AbiEii toxin, Type IV TA system
GNAMLDFM_01429 3.5e-32
GNAMLDFM_01430 2.2e-20
GNAMLDFM_01431 2.5e-56
GNAMLDFM_01432 4.8e-65 S Predicted membrane protein (DUF2142)
GNAMLDFM_01433 1.1e-172 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
GNAMLDFM_01435 1.7e-190 M Glycosyltransferase like family 2
GNAMLDFM_01436 3.6e-225 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
GNAMLDFM_01437 3.6e-137 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
GNAMLDFM_01438 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
GNAMLDFM_01439 8.2e-222 I alpha/beta hydrolase fold
GNAMLDFM_01440 2.8e-252 Q D-alanine [D-alanyl carrier protein] ligase activity
GNAMLDFM_01441 6.6e-111 Q D-alanine [D-alanyl carrier protein] ligase activity
GNAMLDFM_01442 1.1e-101 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
GNAMLDFM_01443 1.2e-13 C Aldo/keto reductase family
GNAMLDFM_01444 3.5e-32
GNAMLDFM_01445 1.2e-299 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
GNAMLDFM_01446 7.9e-293 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
GNAMLDFM_01447 1.6e-183 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
GNAMLDFM_01448 9.1e-242 purD 6.3.4.13 F Belongs to the GARS family
GNAMLDFM_01449 1.5e-294 aldH 1.2.1.3, 1.2.1.5 C Aldehyde dehydrogenase family
GNAMLDFM_01450 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
GNAMLDFM_01451 3.2e-143 P Zinc-uptake complex component A periplasmic
GNAMLDFM_01452 8.9e-69 zur P Belongs to the Fur family
GNAMLDFM_01453 1.1e-222 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GNAMLDFM_01454 6.2e-85 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
GNAMLDFM_01455 2.4e-181 adh3 C Zinc-binding dehydrogenase
GNAMLDFM_01456 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GNAMLDFM_01457 5.6e-278 macB_8 V MacB-like periplasmic core domain
GNAMLDFM_01458 8e-177 M Conserved repeat domain
GNAMLDFM_01459 4e-134 V ATPases associated with a variety of cellular activities
GNAMLDFM_01460 1.9e-86 msrA 1.8.4.11, 1.8.4.12 O peptide-methionine (S)-S-oxide reductase activity
GNAMLDFM_01461 0.0 E ABC transporter, substrate-binding protein, family 5
GNAMLDFM_01462 4.5e-13 L Psort location Cytoplasmic, score 8.87
GNAMLDFM_01463 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
GNAMLDFM_01464 9.9e-225 K helix_turn _helix lactose operon repressor
GNAMLDFM_01465 4.3e-258 G Bacterial extracellular solute-binding protein
GNAMLDFM_01468 3.1e-156 K Helix-turn-helix domain, rpiR family
GNAMLDFM_01469 3.5e-42 G Alpha-L-arabinofuranosidase C-terminal domain
GNAMLDFM_01470 3.3e-30
GNAMLDFM_01471 3.8e-210 ybiR P Citrate transporter
GNAMLDFM_01472 1.6e-293 EK Alanine-glyoxylate amino-transferase
GNAMLDFM_01473 1.1e-115 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
GNAMLDFM_01474 3.1e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
GNAMLDFM_01475 1e-34
GNAMLDFM_01476 1.8e-69 S PIN domain
GNAMLDFM_01477 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
GNAMLDFM_01478 2.9e-243 dgt 3.1.5.1 F Phosphohydrolase-associated domain
GNAMLDFM_01479 2.9e-262 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GNAMLDFM_01480 4.3e-272 yhdG E aromatic amino acid transport protein AroP K03293
GNAMLDFM_01481 6.5e-104 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
GNAMLDFM_01482 2.7e-93 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
GNAMLDFM_01483 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
GNAMLDFM_01484 3.5e-219 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
GNAMLDFM_01485 1.8e-192 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
GNAMLDFM_01486 2.4e-136 sapF E ATPases associated with a variety of cellular activities
GNAMLDFM_01487 5.5e-136 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
GNAMLDFM_01488 1.1e-146 EP Binding-protein-dependent transport system inner membrane component
GNAMLDFM_01489 7.4e-167 P Binding-protein-dependent transport system inner membrane component
GNAMLDFM_01490 1.9e-292 E ABC transporter, substrate-binding protein, family 5
GNAMLDFM_01491 4.5e-143 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
GNAMLDFM_01492 4e-278 G Bacterial extracellular solute-binding protein
GNAMLDFM_01493 1.7e-259 G Bacterial extracellular solute-binding protein
GNAMLDFM_01494 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GNAMLDFM_01495 1.2e-167 G ABC transporter permease
GNAMLDFM_01496 1.4e-167 malC G Binding-protein-dependent transport system inner membrane component
GNAMLDFM_01497 3.3e-186 K Periplasmic binding protein domain
GNAMLDFM_01498 5.3e-158 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
GNAMLDFM_01499 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
GNAMLDFM_01500 1.4e-150 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
GNAMLDFM_01501 8e-153 yecS E Binding-protein-dependent transport system inner membrane component
GNAMLDFM_01502 5.8e-169 pknD ET ABC transporter, substrate-binding protein, family 3
GNAMLDFM_01503 1.6e-142 pknD ET ABC transporter, substrate-binding protein, family 3
GNAMLDFM_01504 9.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
GNAMLDFM_01505 3.2e-144 usp 3.5.1.28 CBM50 D CHAP domain protein
GNAMLDFM_01506 9.8e-161 ftsX D Part of the ABC transporter FtsEX involved in cellular division
GNAMLDFM_01507 4.8e-192 ftsE D Cell division ATP-binding protein FtsE
GNAMLDFM_01508 1e-204 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
GNAMLDFM_01509 8.5e-268 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
GNAMLDFM_01510 1.1e-121 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GNAMLDFM_01511 8.9e-259 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GNAMLDFM_01512 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
GNAMLDFM_01513 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GNAMLDFM_01514 1.7e-165 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GNAMLDFM_01515 7.1e-133 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
GNAMLDFM_01516 6.1e-233 G Major Facilitator Superfamily
GNAMLDFM_01517 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
GNAMLDFM_01518 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
GNAMLDFM_01519 1.2e-221 KLT Protein tyrosine kinase
GNAMLDFM_01520 0.0 S Fibronectin type 3 domain
GNAMLDFM_01521 1.1e-237 S Protein of unknown function DUF58
GNAMLDFM_01522 0.0 E Transglutaminase-like superfamily
GNAMLDFM_01523 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GNAMLDFM_01524 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GNAMLDFM_01525 5.3e-125
GNAMLDFM_01526 9.2e-186 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
GNAMLDFM_01527 7.6e-115 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
GNAMLDFM_01528 1.9e-45 L Integrase core domain
GNAMLDFM_01529 2.1e-118 EGP Major Facilitator Superfamily
GNAMLDFM_01530 5.5e-137 EGP Major Facilitator Superfamily
GNAMLDFM_01532 1.9e-115 K WHG domain
GNAMLDFM_01533 6.5e-111 pptA 6.3.2.14 Q 4'-phosphopantetheinyl transferase superfamily
GNAMLDFM_01534 2.2e-60 L PFAM Integrase catalytic
GNAMLDFM_01535 2.9e-15 S COG NOG14600 non supervised orthologous group
GNAMLDFM_01536 9.8e-296 L PFAM Integrase catalytic
GNAMLDFM_01537 4.3e-171 G Acyltransferase family
GNAMLDFM_01538 8.6e-56 KLT Protein tyrosine kinase
GNAMLDFM_01539 1.1e-209 EGP Transmembrane secretion effector
GNAMLDFM_01540 3e-228 2.7.7.7 L Transposase and inactivated derivatives
GNAMLDFM_01541 2.5e-106 L Transposase and inactivated derivatives IS30 family
GNAMLDFM_01542 4.6e-67 L Integrase core domain
GNAMLDFM_01543 1e-26 L PFAM Integrase catalytic
GNAMLDFM_01544 0.0 trxB2 1.8.1.9 C Thioredoxin domain
GNAMLDFM_01545 2.9e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
GNAMLDFM_01546 2.4e-119 cah 4.2.1.1 P Reversible hydration of carbon dioxide
GNAMLDFM_01547 5.5e-206 S AAA ATPase domain
GNAMLDFM_01548 5.7e-234 ytfL P Transporter associated domain
GNAMLDFM_01549 1.2e-82 dps P Belongs to the Dps family
GNAMLDFM_01550 6.7e-256 S Domain of unknown function (DUF4143)
GNAMLDFM_01551 9.3e-121 S Protein of unknown function DUF45
GNAMLDFM_01554 7.4e-17 S Domain of unknown function (DUF4143)
GNAMLDFM_01555 5.3e-197 S Psort location CytoplasmicMembrane, score
GNAMLDFM_01556 2.8e-257 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
GNAMLDFM_01557 5.2e-203 V VanZ like family
GNAMLDFM_01558 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GNAMLDFM_01559 1.4e-15 lacS G Psort location CytoplasmicMembrane, score 10.00
GNAMLDFM_01560 4.5e-183 lacR K Transcriptional regulator, LacI family
GNAMLDFM_01561 9.3e-50 S Transmembrane domain of unknown function (DUF3566)
GNAMLDFM_01562 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GNAMLDFM_01563 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GNAMLDFM_01564 4.2e-83 S Protein of unknown function (DUF721)
GNAMLDFM_01565 1.1e-201 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GNAMLDFM_01566 5.5e-206 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
GNAMLDFM_01567 3.3e-280 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GNAMLDFM_01568 2.6e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
GNAMLDFM_01569 2.9e-57 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
GNAMLDFM_01570 9.3e-181 yidC U Membrane protein insertase, YidC Oxa1 family
GNAMLDFM_01571 3e-93 jag S Putative single-stranded nucleic acids-binding domain
GNAMLDFM_01572 3.4e-123 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
GNAMLDFM_01573 8.1e-174 parA D CobQ CobB MinD ParA nucleotide binding domain protein
GNAMLDFM_01574 1e-221 parB K Belongs to the ParB family
GNAMLDFM_01575 3.5e-175 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
GNAMLDFM_01576 0.0 murJ KLT MviN-like protein
GNAMLDFM_01577 0.0
GNAMLDFM_01578 2.3e-160 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
GNAMLDFM_01579 2.7e-282 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
GNAMLDFM_01580 3.1e-110 S LytR cell envelope-related transcriptional attenuator
GNAMLDFM_01581 1.3e-173 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
GNAMLDFM_01582 2.2e-168 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
GNAMLDFM_01583 4.8e-215 S G5
GNAMLDFM_01585 2e-135 O Thioredoxin
GNAMLDFM_01586 0.0 KLT Protein tyrosine kinase
GNAMLDFM_01587 3.9e-119 3.2.1.21 GH3 G Fibronectin type III-like domain
GNAMLDFM_01588 2.7e-118 T LytTr DNA-binding domain
GNAMLDFM_01589 1.7e-134 T GHKL domain
GNAMLDFM_01590 0.0 3.2.1.21 GH3 G Fibronectin type III-like domain
GNAMLDFM_01591 7.7e-50 kcsA U Ion channel
GNAMLDFM_01592 3.8e-125 S Protein of unknown function (DUF3990)
GNAMLDFM_01593 3.1e-121 K Helix-turn-helix XRE-family like proteins
GNAMLDFM_01594 0.0 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
GNAMLDFM_01595 8.3e-122 S Psort location CytoplasmicMembrane, score
GNAMLDFM_01597 2e-42 nrdH O Glutaredoxin
GNAMLDFM_01598 6e-88 nrdI F Probably involved in ribonucleotide reductase function
GNAMLDFM_01599 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GNAMLDFM_01601 1.3e-190 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GNAMLDFM_01602 1.2e-216 2.4.1.166 GT2 M Glycosyltransferase like family 2
GNAMLDFM_01603 2.1e-73 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GNAMLDFM_01604 1.1e-44 ulaB 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
GNAMLDFM_01605 4.9e-241 ulaA 2.7.1.194 S PTS system sugar-specific permease component
GNAMLDFM_01606 6e-137 K UTRA domain
GNAMLDFM_01607 4.3e-211 ugpC E Belongs to the ABC transporter superfamily
GNAMLDFM_01608 9.1e-26 tnp3514b L Winged helix-turn helix
GNAMLDFM_01610 2.2e-185
GNAMLDFM_01611 3.8e-142 U Branched-chain amino acid transport system / permease component
GNAMLDFM_01612 7.9e-179 3.6.3.17 G ATPases associated with a variety of cellular activities
GNAMLDFM_01613 4.2e-146 G Periplasmic binding protein domain
GNAMLDFM_01614 1.5e-131 K helix_turn _helix lactose operon repressor
GNAMLDFM_01615 7.6e-18 tnp7109-21 L Integrase core domain
GNAMLDFM_01616 1.3e-287 S LPXTG-motif cell wall anchor domain protein
GNAMLDFM_01617 8.4e-261 M LPXTG-motif cell wall anchor domain protein
GNAMLDFM_01618 8.5e-179 3.4.22.70 M Sortase family
GNAMLDFM_01619 4.2e-136
GNAMLDFM_01620 2.3e-270 KLT Domain of unknown function (DUF4032)
GNAMLDFM_01621 4.2e-302 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
GNAMLDFM_01622 1.8e-164 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
GNAMLDFM_01623 6.4e-174 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GNAMLDFM_01624 7.4e-43
GNAMLDFM_01625 7.7e-125 I alpha/beta hydrolase fold
GNAMLDFM_01626 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
GNAMLDFM_01627 8.6e-25
GNAMLDFM_01628 1e-110 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
GNAMLDFM_01629 1.1e-150
GNAMLDFM_01630 1.1e-146 ypfH S Phospholipase/Carboxylesterase
GNAMLDFM_01631 4.7e-119 S membrane transporter protein
GNAMLDFM_01632 0.0 yjcE P Sodium/hydrogen exchanger family
GNAMLDFM_01633 9.8e-79 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
GNAMLDFM_01634 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
GNAMLDFM_01635 3.8e-229 nagC GK ROK family
GNAMLDFM_01636 3.8e-243 msmE7 G Bacterial extracellular solute-binding protein
GNAMLDFM_01637 4.7e-147 malC G Binding-protein-dependent transport system inner membrane component
GNAMLDFM_01638 2.9e-154 G Binding-protein-dependent transport system inner membrane component
GNAMLDFM_01639 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
GNAMLDFM_01640 1.5e-231 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
GNAMLDFM_01641 6.4e-142 cobB2 K Sir2 family
GNAMLDFM_01642 2e-45 L IstB-like ATP binding protein
GNAMLDFM_01643 3.2e-27 yjdF S Protein of unknown function (DUF2992)
GNAMLDFM_01644 2.3e-176 V Abi-like protein
GNAMLDFM_01645 0.0 XK27_09800 I Psort location CytoplasmicMembrane, score 9.99
GNAMLDFM_01646 3.2e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GNAMLDFM_01648 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
GNAMLDFM_01649 1.1e-231 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GNAMLDFM_01650 6.6e-251 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
GNAMLDFM_01651 1.9e-214 ykiI
GNAMLDFM_01653 6.2e-20 tag 3.2.2.20 L Methyladenine glycosylase
GNAMLDFM_01655 3.5e-120 S GyrI-like small molecule binding domain
GNAMLDFM_01656 6.9e-89 K Putative zinc ribbon domain
GNAMLDFM_01657 1.3e-25 zntR K bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
GNAMLDFM_01658 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
GNAMLDFM_01659 4e-127 3.6.1.13 L NUDIX domain
GNAMLDFM_01660 5.1e-178 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
GNAMLDFM_01661 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GNAMLDFM_01662 1.2e-122 pdtaR T Response regulator receiver domain protein
GNAMLDFM_01664 9.1e-107 aspA 3.6.1.13 L NUDIX domain
GNAMLDFM_01665 2.7e-274 pyk 2.7.1.40 G Pyruvate kinase
GNAMLDFM_01666 2.1e-177 terC P Integral membrane protein, TerC family
GNAMLDFM_01667 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
GNAMLDFM_01668 2.3e-105 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GNAMLDFM_01669 1.2e-253 rpsA J Ribosomal protein S1
GNAMLDFM_01670 1.1e-161 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GNAMLDFM_01671 3e-183 P Zinc-uptake complex component A periplasmic
GNAMLDFM_01672 1.9e-161 znuC P ATPases associated with a variety of cellular activities
GNAMLDFM_01673 4.4e-136 znuB U ABC 3 transport family
GNAMLDFM_01674 1.1e-87 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
GNAMLDFM_01675 2.1e-100 carD K CarD-like/TRCF domain
GNAMLDFM_01676 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
GNAMLDFM_01677 1e-128 T Response regulator receiver domain protein
GNAMLDFM_01678 9.8e-197 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GNAMLDFM_01679 6.5e-122 ctsW S Phosphoribosyl transferase domain
GNAMLDFM_01680 2.2e-148 cof 5.2.1.8 T Eukaryotic phosphomannomutase
GNAMLDFM_01681 6.3e-78 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
GNAMLDFM_01682 1.1e-262
GNAMLDFM_01683 0.0 S Glycosyl transferase, family 2
GNAMLDFM_01684 1.5e-54 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
GNAMLDFM_01685 2.1e-204 K Cell envelope-related transcriptional attenuator domain
GNAMLDFM_01686 0.0 D FtsK/SpoIIIE family
GNAMLDFM_01687 4.9e-47 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
GNAMLDFM_01688 7.5e-280 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GNAMLDFM_01689 5.9e-145 yplQ S Haemolysin-III related
GNAMLDFM_01690 4.4e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GNAMLDFM_01691 1.4e-74 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
GNAMLDFM_01692 6.7e-281 sdaA 4.3.1.17 E Serine dehydratase alpha chain
GNAMLDFM_01693 3.2e-93
GNAMLDFM_01694 2.5e-40 int8 L Phage integrase family
GNAMLDFM_01695 2.6e-87 int8 L Phage integrase family
GNAMLDFM_01698 1.3e-07
GNAMLDFM_01701 1.1e-33
GNAMLDFM_01702 2.3e-07
GNAMLDFM_01703 1.6e-121 XK27_00240 K Fic/DOC family
GNAMLDFM_01705 3.9e-87 L PFAM Integrase catalytic
GNAMLDFM_01706 8.8e-49 L PFAM Integrase catalytic
GNAMLDFM_01707 3.8e-147 K helix_turn _helix lactose operon repressor
GNAMLDFM_01708 7.9e-237 bfrA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
GNAMLDFM_01709 7.4e-258 M Protein of unknown function (DUF2961)
GNAMLDFM_01710 4.4e-128 P Binding-protein-dependent transport systems inner membrane component
GNAMLDFM_01711 3.3e-126 P Binding-protein-dependent transport system inner membrane component
GNAMLDFM_01712 8.6e-211 G Bacterial extracellular solute-binding protein
GNAMLDFM_01713 2.4e-88 pin L Resolvase, N terminal domain
GNAMLDFM_01714 9.2e-45 L Helix-turn-helix domain
GNAMLDFM_01715 2.8e-80 insK L Integrase core domain
GNAMLDFM_01716 2.6e-81 L HTH-like domain
GNAMLDFM_01718 5.8e-183 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
GNAMLDFM_01719 6.3e-102 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
GNAMLDFM_01720 1.6e-63 divIC D Septum formation initiator
GNAMLDFM_01721 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GNAMLDFM_01722 1e-178 1.1.1.65 C Aldo/keto reductase family
GNAMLDFM_01723 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GNAMLDFM_01724 7.6e-114 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
GNAMLDFM_01725 4.3e-90 2.3.1.183 M Acetyltransferase (GNAT) domain
GNAMLDFM_01726 0.0 S Uncharacterised protein family (UPF0182)
GNAMLDFM_01727 8.6e-12 P Zinc-uptake complex component A periplasmic
GNAMLDFM_01728 1.8e-151 P Zinc-uptake complex component A periplasmic
GNAMLDFM_01730 6.4e-167 ycgR S Predicted permease
GNAMLDFM_01731 8e-130 S TIGRFAM TIGR03943 family protein
GNAMLDFM_01732 7.8e-137 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GNAMLDFM_01733 3e-96
GNAMLDFM_01734 2.9e-235 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
GNAMLDFM_01735 8.6e-284 thrC 4.2.3.1 E Threonine synthase N terminus
GNAMLDFM_01736 3.1e-196 S Protein of unknown function (DUF1648)
GNAMLDFM_01737 7.8e-71 K helix_turn_helix gluconate operon transcriptional repressor
GNAMLDFM_01738 8.8e-25 pacL2 3.6.3.8 P ATPase, P-type transporting, HAD superfamily, subfamily IC
GNAMLDFM_01739 3.7e-107
GNAMLDFM_01740 1.7e-120 S ABC-2 family transporter protein
GNAMLDFM_01741 1.1e-172 V ATPases associated with a variety of cellular activities
GNAMLDFM_01742 4.8e-58 K helix_turn_helix gluconate operon transcriptional repressor
GNAMLDFM_01743 2.3e-18 J Acetyltransferase (GNAT) domain
GNAMLDFM_01744 6e-13 J Acetyltransferase (GNAT) domain
GNAMLDFM_01745 5e-119 S Haloacid dehalogenase-like hydrolase
GNAMLDFM_01746 0.0 recN L May be involved in recombinational repair of damaged DNA
GNAMLDFM_01747 9.6e-183 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GNAMLDFM_01748 1.9e-41 trkB P Cation transport protein
GNAMLDFM_01749 1.3e-49 trkA P TrkA-N domain
GNAMLDFM_01750 1.4e-95
GNAMLDFM_01751 5.5e-141 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
GNAMLDFM_01753 3.2e-200 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
GNAMLDFM_01754 4.9e-137 L Tetratricopeptide repeat
GNAMLDFM_01756 5.9e-143 fic D Fic/DOC family
GNAMLDFM_01757 3.3e-26
GNAMLDFM_01759 5e-50 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
GNAMLDFM_01760 6.3e-238 S HipA-like C-terminal domain
GNAMLDFM_01762 2.3e-74
GNAMLDFM_01763 1.6e-102 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GNAMLDFM_01764 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GNAMLDFM_01765 5.5e-83 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
GNAMLDFM_01766 1.4e-47 S Domain of unknown function (DUF4193)
GNAMLDFM_01767 1.3e-148 S Protein of unknown function (DUF3071)
GNAMLDFM_01768 1.5e-233 S Type I phosphodiesterase / nucleotide pyrophosphatase
GNAMLDFM_01769 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
GNAMLDFM_01770 3.1e-104 G Bacterial extracellular solute-binding protein
GNAMLDFM_01771 2.3e-42 K AraC-like ligand binding domain
GNAMLDFM_01772 5.2e-43 K Psort location Cytoplasmic, score
GNAMLDFM_01773 1.2e-48 K Psort location Cytoplasmic, score
GNAMLDFM_01774 0.0 lhr L DEAD DEAH box helicase
GNAMLDFM_01775 8.3e-171 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GNAMLDFM_01776 2.2e-221 G Major Facilitator Superfamily
GNAMLDFM_01777 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
GNAMLDFM_01778 1.4e-190 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
GNAMLDFM_01779 3.2e-110
GNAMLDFM_01780 2.1e-194 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
GNAMLDFM_01781 0.0 pknL 2.7.11.1 KLT PASTA
GNAMLDFM_01782 6.2e-131 plsC2 2.3.1.51 I Phosphate acyltransferases
GNAMLDFM_01783 2e-118
GNAMLDFM_01784 6.7e-190 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
GNAMLDFM_01785 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GNAMLDFM_01786 2.4e-113 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GNAMLDFM_01787 1.1e-101 recX S Modulates RecA activity
GNAMLDFM_01788 1.1e-196 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GNAMLDFM_01789 7e-39 S Protein of unknown function (DUF3046)
GNAMLDFM_01790 7.6e-78 K Helix-turn-helix XRE-family like proteins
GNAMLDFM_01791 7.4e-95 cinA 3.5.1.42 S Belongs to the CinA family
GNAMLDFM_01792 3.5e-117 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GNAMLDFM_01793 0.0 ftsK D FtsK SpoIIIE family protein
GNAMLDFM_01794 2.2e-151 fic D Fic/DOC family
GNAMLDFM_01795 2.1e-177 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GNAMLDFM_01796 1.3e-276 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
GNAMLDFM_01797 6.9e-145 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
GNAMLDFM_01798 3.1e-165 ydeD EG EamA-like transporter family
GNAMLDFM_01799 9.7e-136 ybhL S Belongs to the BI1 family
GNAMLDFM_01800 1.4e-81 K helix_turn_helix, Lux Regulon
GNAMLDFM_01801 1.1e-118 E Psort location Cytoplasmic, score 8.87
GNAMLDFM_01802 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
GNAMLDFM_01803 0.0 ctpE P E1-E2 ATPase
GNAMLDFM_01804 1.4e-96
GNAMLDFM_01805 1.2e-241 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GNAMLDFM_01806 3.8e-134 S Protein of unknown function (DUF3159)
GNAMLDFM_01807 4e-145 S Protein of unknown function (DUF3710)
GNAMLDFM_01808 3.3e-171 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
GNAMLDFM_01809 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
GNAMLDFM_01810 1.9e-170 dppC EP N-terminal TM domain of oligopeptide transport permease C
GNAMLDFM_01811 8.9e-154 dppB EP Binding-protein-dependent transport system inner membrane component
GNAMLDFM_01812 2.9e-309 E ABC transporter, substrate-binding protein, family 5
GNAMLDFM_01813 2.1e-188 xerC D Belongs to the 'phage' integrase family. XerC subfamily
GNAMLDFM_01814 4.9e-148 V ABC transporter, ATP-binding protein
GNAMLDFM_01815 0.0 MV MacB-like periplasmic core domain
GNAMLDFM_01816 1.7e-41
GNAMLDFM_01817 1.2e-188 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
GNAMLDFM_01818 1.5e-188 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
GNAMLDFM_01819 1.4e-77
GNAMLDFM_01820 0.0 typA T Elongation factor G C-terminus
GNAMLDFM_01821 2.6e-106 K Virulence activator alpha C-term
GNAMLDFM_01822 1.1e-136 V ATPases associated with a variety of cellular activities
GNAMLDFM_01823 0.0 V FtsX-like permease family
GNAMLDFM_01824 4.5e-19 naiP U Sugar (and other) transporter
GNAMLDFM_01825 8.1e-238 iscS1 2.8.1.7 E Aminotransferase class-V
GNAMLDFM_01826 1.5e-161 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, N-terminal domain
GNAMLDFM_01827 2.8e-296 nadB 1.3.5.4, 1.4.3.16, 2.4.2.19 H Catalyzes the oxidation of L-aspartate to iminoaspartate
GNAMLDFM_01828 7e-250 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
GNAMLDFM_01829 1.8e-153 nrtR 3.6.1.55 F NUDIX hydrolase
GNAMLDFM_01830 4.4e-116 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GNAMLDFM_01831 2.4e-151 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
GNAMLDFM_01832 1.4e-149 soj D CobQ CobB MinD ParA nucleotide binding domain protein
GNAMLDFM_01833 7.6e-145 xerD D recombinase XerD
GNAMLDFM_01834 1.5e-198 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
GNAMLDFM_01835 2.1e-61 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GNAMLDFM_01836 6.2e-25 rpmI J Ribosomal protein L35
GNAMLDFM_01837 1.7e-113 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GNAMLDFM_01838 1.1e-11 S Spermine/spermidine synthase domain
GNAMLDFM_01839 1.6e-134 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
GNAMLDFM_01840 1.4e-195 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
GNAMLDFM_01841 4.2e-89 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GNAMLDFM_01842 7.5e-183 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
GNAMLDFM_01843 2.1e-190 galM 5.1.3.3 G Aldose 1-epimerase
GNAMLDFM_01844 1.1e-186 galM 5.1.3.3 G Aldose 1-epimerase
GNAMLDFM_01845 5.6e-52
GNAMLDFM_01846 3.6e-137 sigH K Belongs to the sigma-70 factor family. ECF subfamily
GNAMLDFM_01847 2.6e-08 pepF E Oligoendopeptidase f
GNAMLDFM_01848 5.7e-65
GNAMLDFM_01849 1.4e-140 G Glycosyl hydrolase family 20, domain 2
GNAMLDFM_01850 1.8e-59 G Glycosyl hydrolase family 20, domain 2
GNAMLDFM_01851 1.4e-35 G Glycosyl hydrolase family 20, domain 2
GNAMLDFM_01852 4.1e-245 L Phage integrase family
GNAMLDFM_01854 3.6e-20 S Protein of unknown function (DUF2599)
GNAMLDFM_01855 3.9e-128
GNAMLDFM_01856 1.6e-80
GNAMLDFM_01857 3.1e-234 L Phage integrase family
GNAMLDFM_01858 6e-68
GNAMLDFM_01860 5.6e-10 S Helix-turn-helix domain
GNAMLDFM_01861 4.7e-214 S Helix-turn-helix domain
GNAMLDFM_01862 1.3e-81 S Transcription factor WhiB
GNAMLDFM_01863 3.3e-101 parA D AAA domain
GNAMLDFM_01864 6.8e-40
GNAMLDFM_01865 1.8e-281 S ATPases associated with a variety of cellular activities
GNAMLDFM_01866 3.4e-94 K FR47-like protein
GNAMLDFM_01867 1.3e-119 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
GNAMLDFM_01868 0.0 XK27_00515 D Cell surface antigen C-terminus
GNAMLDFM_01869 2.4e-44 S Helix-turn-helix domain
GNAMLDFM_01870 1.3e-26 S PIN domain
GNAMLDFM_01871 7.9e-15 L Phage integrase family
GNAMLDFM_01872 9.5e-267 lacS G Psort location CytoplasmicMembrane, score 10.00
GNAMLDFM_01873 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
GNAMLDFM_01874 4.8e-185 lacR K Transcriptional regulator, LacI family
GNAMLDFM_01875 6.3e-22 L Helix-turn-helix domain
GNAMLDFM_01876 1.3e-243 G Bacterial extracellular solute-binding protein
GNAMLDFM_01877 4.5e-219 GK ROK family
GNAMLDFM_01878 0.0 G Glycosyl hydrolase family 20, domain 2
GNAMLDFM_01879 3.5e-09 L HTH-like domain
GNAMLDFM_01880 5.2e-219 vex3 V ABC transporter permease
GNAMLDFM_01881 4.4e-209 vex1 V Efflux ABC transporter, permease protein
GNAMLDFM_01882 4.1e-110 vex2 V ABC transporter, ATP-binding protein
GNAMLDFM_01883 1.5e-97 ptpA 3.1.3.48 T low molecular weight
GNAMLDFM_01884 7.3e-126 folA 1.5.1.3 H dihydrofolate reductase
GNAMLDFM_01885 7.8e-168 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GNAMLDFM_01886 3.4e-73 attW O OsmC-like protein
GNAMLDFM_01887 2.1e-188 T Universal stress protein family
GNAMLDFM_01888 1.5e-103 M NlpC/P60 family
GNAMLDFM_01889 1.4e-101 M NlpC/P60 family
GNAMLDFM_01890 1.7e-168 usp 3.5.1.28 CBM50 S CHAP domain
GNAMLDFM_01891 4.4e-211 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
GNAMLDFM_01892 8.1e-33
GNAMLDFM_01893 6.9e-170 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
GNAMLDFM_01894 5.4e-116 phoU P Plays a role in the regulation of phosphate uptake
GNAMLDFM_01895 1.1e-138 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GNAMLDFM_01896 1.2e-174 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
GNAMLDFM_01897 4.7e-311 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
GNAMLDFM_01899 8.9e-215 araJ EGP Major facilitator Superfamily
GNAMLDFM_01900 0.0 S Domain of unknown function (DUF4037)
GNAMLDFM_01901 1.4e-110 S Protein of unknown function (DUF4125)
GNAMLDFM_01902 0.0 S alpha beta
GNAMLDFM_01903 1.9e-66
GNAMLDFM_01904 4.8e-283 pspC KT PspC domain
GNAMLDFM_01905 7.6e-236 tcsS3 KT PspC domain
GNAMLDFM_01906 4.4e-118 degU K helix_turn_helix, Lux Regulon
GNAMLDFM_01907 4.5e-167 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
GNAMLDFM_01908 6.3e-204 mdsC 2.7.1.162, 2.7.1.39 S Phosphotransferase enzyme family
GNAMLDFM_01909 0.0 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
GNAMLDFM_01910 2.5e-167 G ABC transporter permease
GNAMLDFM_01911 6.9e-173 malC G Binding-protein-dependent transport system inner membrane component
GNAMLDFM_01912 5.5e-250 G Bacterial extracellular solute-binding protein
GNAMLDFM_01914 3.3e-242 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GNAMLDFM_01915 6.5e-200 I Diacylglycerol kinase catalytic domain
GNAMLDFM_01916 5.9e-163 arbG K CAT RNA binding domain
GNAMLDFM_01917 0.0 crr 2.7.1.193 G pts system, glucose-specific IIABC component
GNAMLDFM_01918 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
GNAMLDFM_01919 1.5e-197 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
GNAMLDFM_01920 2.1e-73 K Transcriptional regulator
GNAMLDFM_01921 3.3e-275 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GNAMLDFM_01922 1e-172 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GNAMLDFM_01923 9.1e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GNAMLDFM_01925 1e-97
GNAMLDFM_01926 3.6e-261 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GNAMLDFM_01927 2.8e-218 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
GNAMLDFM_01928 5.4e-220 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GNAMLDFM_01929 4e-81 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GNAMLDFM_01930 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GNAMLDFM_01931 1.4e-184 nusA K Participates in both transcription termination and antitermination
GNAMLDFM_01932 8.9e-125
GNAMLDFM_01933 2.6e-101 K helix_turn _helix lactose operon repressor
GNAMLDFM_01935 7.4e-149 E Transglutaminase/protease-like homologues
GNAMLDFM_01936 0.0 gcs2 S A circularly permuted ATPgrasp
GNAMLDFM_01937 1.6e-168 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
GNAMLDFM_01938 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 M Aamy_C
GNAMLDFM_01939 0.0 dnaK O Heat shock 70 kDa protein
GNAMLDFM_01940 5.2e-58 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GNAMLDFM_01941 9.4e-157 dnaJ1 O DnaJ molecular chaperone homology domain
GNAMLDFM_01942 2.7e-103 hspR K transcriptional regulator, MerR family
GNAMLDFM_01943 3.1e-17 F Psort location CytoplasmicMembrane, score 10.00
GNAMLDFM_01944 3.3e-114 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
GNAMLDFM_01945 2.8e-140 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
GNAMLDFM_01946 6.7e-127 S HAD hydrolase, family IA, variant 3
GNAMLDFM_01947 1e-133 dedA S SNARE associated Golgi protein
GNAMLDFM_01948 6e-122 cpaE D bacterial-type flagellum organization
GNAMLDFM_01949 5.5e-189 cpaF U Type II IV secretion system protein
GNAMLDFM_01950 9.8e-74 U Type ii secretion system
GNAMLDFM_01951 5.8e-115 gspF NU Type II secretion system (T2SS), protein F
GNAMLDFM_01952 1.1e-41 S Protein of unknown function (DUF4244)
GNAMLDFM_01953 1.4e-57 U TadE-like protein
GNAMLDFM_01954 6.5e-54 S TIGRFAM helicase secretion neighborhood TadE-like protein
GNAMLDFM_01955 1.1e-214 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
GNAMLDFM_01956 3.5e-95 K Bacterial regulatory proteins, tetR family
GNAMLDFM_01957 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
GNAMLDFM_01958 8.7e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GNAMLDFM_01959 8.6e-31 S ATPase domain predominantly from Archaea
GNAMLDFM_01960 6.6e-197 3.4.22.70 M Sortase family
GNAMLDFM_01961 4.8e-69 V Abi-like protein
GNAMLDFM_01962 3.6e-193 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
GNAMLDFM_01963 1.3e-134 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
GNAMLDFM_01964 1.8e-96 askB 1.1.1.3, 2.7.2.4 E ACT domain
GNAMLDFM_01965 2.9e-212 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GNAMLDFM_01966 2.5e-112
GNAMLDFM_01967 1.5e-174 L Domain of unknown function (DUF4862)
GNAMLDFM_01968 4.1e-168 2.7.1.2 GK ROK family
GNAMLDFM_01969 1.3e-125 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
GNAMLDFM_01970 3.6e-159 3.5.1.106 I carboxylic ester hydrolase activity
GNAMLDFM_01971 3.1e-300 E Bacterial extracellular solute-binding proteins, family 5 Middle
GNAMLDFM_01972 4.6e-153 oppB6 EP Binding-protein-dependent transport system inner membrane component
GNAMLDFM_01973 0.0 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
GNAMLDFM_01974 6.5e-148 oppF E ATPases associated with a variety of cellular activities
GNAMLDFM_01975 9.8e-180 nanL 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
GNAMLDFM_01976 4.6e-146 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GNAMLDFM_01977 3.5e-13 nagA 3.5.1.25 G Amidohydrolase family
GNAMLDFM_01978 0.0 nanI 3.2.1.18 GH33 G BNR repeat-like domain
GNAMLDFM_01979 1.2e-246 P Domain of unknown function (DUF4143)
GNAMLDFM_01980 9e-153 K FCD
GNAMLDFM_01981 8.8e-273 S Calcineurin-like phosphoesterase
GNAMLDFM_01982 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
GNAMLDFM_01983 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
GNAMLDFM_01984 1.6e-165 3.6.1.27 I PAP2 superfamily
GNAMLDFM_01985 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GNAMLDFM_01986 4.5e-115 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GNAMLDFM_01987 3.9e-207 holB 2.7.7.7 L DNA polymerase III
GNAMLDFM_01988 3e-105 K helix_turn _helix lactose operon repressor
GNAMLDFM_01989 3.3e-37 ptsH G PTS HPr component phosphorylation site
GNAMLDFM_01990 3.9e-293 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GNAMLDFM_01991 3.1e-104 S Phosphatidylethanolamine-binding protein
GNAMLDFM_01992 2.7e-310 pepD E Peptidase family C69
GNAMLDFM_01993 2.5e-286 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
GNAMLDFM_01994 6.7e-62 S Macrophage migration inhibitory factor (MIF)
GNAMLDFM_01995 8.4e-96 S GtrA-like protein
GNAMLDFM_01996 4.8e-247 EGP Major facilitator Superfamily
GNAMLDFM_01997 2.6e-123 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
GNAMLDFM_01998 6.3e-118
GNAMLDFM_01999 1.4e-228 3.1.1.31 G Lactonase, 7-bladed beta-propeller
GNAMLDFM_02000 2.2e-145 S Protein of unknown function (DUF805)
GNAMLDFM_02002 2.7e-293 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GNAMLDFM_02005 2.7e-31 L Phage integrase, N-terminal SAM-like domain
GNAMLDFM_02006 1.9e-22 L Phage integrase, N-terminal SAM-like domain
GNAMLDFM_02008 0.0 efeU_1 P Iron permease FTR1 family
GNAMLDFM_02009 1.6e-99 tpd P Fe2+ transport protein
GNAMLDFM_02010 3.2e-231 S Predicted membrane protein (DUF2318)
GNAMLDFM_02011 6.5e-227 macB_2 V ABC transporter permease
GNAMLDFM_02012 2.1e-199 Z012_06715 V FtsX-like permease family
GNAMLDFM_02013 1.7e-145 macB V ABC transporter, ATP-binding protein
GNAMLDFM_02014 2.4e-61 S FMN_bind
GNAMLDFM_02015 7.1e-101 K Psort location Cytoplasmic, score 8.87
GNAMLDFM_02016 2.2e-304 pip S YhgE Pip domain protein
GNAMLDFM_02017 0.0 pip S YhgE Pip domain protein
GNAMLDFM_02018 5.1e-251 S Putative ABC-transporter type IV
GNAMLDFM_02019 2.2e-271 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)