ORF_ID e_value Gene_name EC_number CAZy COGs Description
PCGDLBEE_00001 5.5e-43
PCGDLBEE_00002 4.7e-76 xylR GK ROK family
PCGDLBEE_00003 6.6e-167 xylB 1.1.1.57, 2.7.1.17 G Belongs to the FGGY kinase family
PCGDLBEE_00004 2.1e-79 G ABC-type sugar transport system periplasmic component
PCGDLBEE_00005 1.1e-119 G ATPases associated with a variety of cellular activities
PCGDLBEE_00006 1.9e-72 P branched-chain amino acid ABC transporter, permease protein
PCGDLBEE_00007 1.9e-57 G Branched-chain amino acid transport system / permease component
PCGDLBEE_00008 5.9e-47 5.3.1.27 G sugar phosphate isomerase involved in capsule formation
PCGDLBEE_00010 8.2e-64 K Helix-turn-helix domain
PCGDLBEE_00011 7.8e-235 glf 5.4.99.9 M UDP-galactopyranose mutase
PCGDLBEE_00012 5.1e-162
PCGDLBEE_00013 9.2e-106 S Domain of unknown function (DUF4190)
PCGDLBEE_00014 4e-158 fahA Q Fumarylacetoacetate (FAA) hydrolase family
PCGDLBEE_00015 1.2e-163 S Auxin Efflux Carrier
PCGDLBEE_00016 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PCGDLBEE_00018 2e-216 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
PCGDLBEE_00019 3.7e-215 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
PCGDLBEE_00020 2.8e-82 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PCGDLBEE_00021 3.9e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PCGDLBEE_00022 1.6e-49 P Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00023 0.0 G N-terminal domain of (some) glycogen debranching enzymes
PCGDLBEE_00024 4.7e-130
PCGDLBEE_00025 2.3e-233 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
PCGDLBEE_00026 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PCGDLBEE_00027 2.8e-257 S Calcineurin-like phosphoesterase
PCGDLBEE_00028 1.4e-08 S Calcineurin-like phosphoesterase
PCGDLBEE_00029 2.2e-140 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
PCGDLBEE_00030 4.2e-272 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PCGDLBEE_00031 9.3e-132 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PCGDLBEE_00032 2.5e-19 S Bacterial PH domain
PCGDLBEE_00033 4.3e-40 2.7.13.3 T Histidine kinase
PCGDLBEE_00034 9e-220 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
PCGDLBEE_00035 4.5e-132 yxeO 3.6.3.21 E ATPases associated with a variety of cellular activities
PCGDLBEE_00036 9.5e-103 S L-2-amino-thiazoline-4-carboxylic acid hydrolase
PCGDLBEE_00037 2.6e-138 P Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00038 1.1e-119 ytmL P Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00039 2.1e-157 ET Bacterial periplasmic substrate-binding proteins
PCGDLBEE_00040 7.6e-255 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
PCGDLBEE_00041 6.8e-256 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PCGDLBEE_00042 2.1e-222 G Transmembrane secretion effector
PCGDLBEE_00043 8.1e-131 K Bacterial regulatory proteins, tetR family
PCGDLBEE_00044 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PCGDLBEE_00045 1.5e-302 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PCGDLBEE_00046 2.5e-57 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PCGDLBEE_00047 3.8e-231 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
PCGDLBEE_00048 1.8e-237 hom 1.1.1.3 E Homoserine dehydrogenase
PCGDLBEE_00049 1.4e-185 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PCGDLBEE_00050 9e-270 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
PCGDLBEE_00051 3.2e-89 K Acetyltransferase (GNAT) family
PCGDLBEE_00052 7.2e-29 S Protein of unknown function (DUF1778)
PCGDLBEE_00053 3.6e-130 V ATPases associated with a variety of cellular activities
PCGDLBEE_00054 2e-221 V Efflux ABC transporter, permease protein
PCGDLBEE_00055 1.2e-191 K Bacterial regulatory proteins, lacI family
PCGDLBEE_00056 2.7e-249 4.2.1.68 M Enolase C-terminal domain-like
PCGDLBEE_00057 2.8e-148 IQ KR domain
PCGDLBEE_00058 5.4e-202 fucP G Major Facilitator Superfamily
PCGDLBEE_00059 3.2e-149 S Amidohydrolase
PCGDLBEE_00060 1.7e-165 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
PCGDLBEE_00061 1.9e-167 mdcF S Transporter, auxin efflux carrier (AEC) family protein
PCGDLBEE_00062 2.4e-231 dapE 3.5.1.18 E Peptidase dimerisation domain
PCGDLBEE_00063 0.0 rne 3.1.26.12 J Ribonuclease E/G family
PCGDLBEE_00064 1.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
PCGDLBEE_00065 5.8e-39 rpmA J Ribosomal L27 protein
PCGDLBEE_00066 2.3e-311 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PCGDLBEE_00067 1.9e-195 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PCGDLBEE_00068 1.5e-215 G polysaccharide deacetylase
PCGDLBEE_00069 3.8e-229 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
PCGDLBEE_00071 1.4e-31 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PCGDLBEE_00072 7e-110 nusG K Participates in transcription elongation, termination and antitermination
PCGDLBEE_00073 2.1e-145 K Psort location Cytoplasmic, score
PCGDLBEE_00074 4e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PCGDLBEE_00075 2.7e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PCGDLBEE_00076 3.2e-164 QT PucR C-terminal helix-turn-helix domain
PCGDLBEE_00077 0.0
PCGDLBEE_00078 2.2e-163 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
PCGDLBEE_00079 1.2e-90 bioY S BioY family
PCGDLBEE_00081 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
PCGDLBEE_00082 4.5e-294 pccB I Carboxyl transferase domain
PCGDLBEE_00083 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
PCGDLBEE_00084 9.5e-46 XK27_04590 S NADPH-dependent FMN reductase
PCGDLBEE_00089 7.5e-181 K Helix-turn-helix XRE-family like proteins
PCGDLBEE_00090 2.3e-21 yxiO G Major facilitator Superfamily
PCGDLBEE_00091 1.8e-53 relB L RelB antitoxin
PCGDLBEE_00092 6.3e-69 T Toxic component of a toxin-antitoxin (TA) module
PCGDLBEE_00093 2.5e-130 K helix_turn_helix, mercury resistance
PCGDLBEE_00094 4.5e-236 yxiO S Vacuole effluxer Atg22 like
PCGDLBEE_00095 7.4e-194 yegV G pfkB family carbohydrate kinase
PCGDLBEE_00096 2.5e-29 rpmB J Ribosomal L28 family
PCGDLBEE_00097 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
PCGDLBEE_00098 1.7e-102 rsmD 2.1.1.171 L Conserved hypothetical protein 95
PCGDLBEE_00099 5.3e-178 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PCGDLBEE_00100 4e-300 yegQ O Peptidase family U32 C-terminal domain
PCGDLBEE_00101 1.3e-196 yfiH Q Multi-copper polyphenol oxidoreductase laccase
PCGDLBEE_00102 2.1e-149 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PCGDLBEE_00103 2.6e-126 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PCGDLBEE_00104 8.9e-44 D nuclear chromosome segregation
PCGDLBEE_00105 1e-267 pepC 3.4.22.40 E Peptidase C1-like family
PCGDLBEE_00106 1.7e-262 pepC 3.4.22.40 E Peptidase C1-like family
PCGDLBEE_00107 6.8e-99 U MarC family integral membrane protein
PCGDLBEE_00108 4.6e-188 K Periplasmic binding protein domain
PCGDLBEE_00109 3.1e-237 G Bacterial extracellular solute-binding protein
PCGDLBEE_00110 2.6e-169 malC U Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00111 5.7e-152 P Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00112 0.0 kojP 2.4.1.230 GH65 G Glycosyl hydrolase family 65 central catalytic domain
PCGDLBEE_00113 1.2e-155 EG EamA-like transporter family
PCGDLBEE_00114 4.8e-114 pgmB 5.4.2.6 S phosphonoacetaldehyde hydrolase activity
PCGDLBEE_00115 0.0 ebgA 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PCGDLBEE_00116 4.1e-86 ebgC G YhcH YjgK YiaL family protein
PCGDLBEE_00117 4.1e-217 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PCGDLBEE_00118 1.9e-236 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PCGDLBEE_00119 7.4e-124 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PCGDLBEE_00120 9.7e-239 EGP Sugar (and other) transporter
PCGDLBEE_00121 7.1e-205 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
PCGDLBEE_00122 3.8e-142 KT Transcriptional regulatory protein, C terminal
PCGDLBEE_00123 2.8e-202 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
PCGDLBEE_00124 1.2e-156 pstC P probably responsible for the translocation of the substrate across the membrane
PCGDLBEE_00125 1.3e-171 pstA P Phosphate transport system permease
PCGDLBEE_00126 1.2e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PCGDLBEE_00127 1.1e-251 pbuO S Permease family
PCGDLBEE_00128 6.4e-145 3.2.1.8 S alpha beta
PCGDLBEE_00129 2.4e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PCGDLBEE_00130 9.3e-49 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PCGDLBEE_00131 3.8e-185 T Forkhead associated domain
PCGDLBEE_00132 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
PCGDLBEE_00133 4.8e-28 L Superfamily I DNA and RNA helicases and helicase subunits
PCGDLBEE_00134 7e-93 flgA NO SAF
PCGDLBEE_00135 4.3e-31 fmdB S Putative regulatory protein
PCGDLBEE_00136 7.3e-56 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
PCGDLBEE_00137 2.6e-85 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
PCGDLBEE_00138 1.6e-134
PCGDLBEE_00139 1.5e-46 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PCGDLBEE_00143 4.1e-25 rpmG J Ribosomal protein L33
PCGDLBEE_00144 1.3e-213 murB 1.3.1.98 M Cell wall formation
PCGDLBEE_00145 1.4e-268 E aromatic amino acid transport protein AroP K03293
PCGDLBEE_00146 2.9e-59 fdxA C 4Fe-4S binding domain
PCGDLBEE_00147 5.7e-222 dapC E Aminotransferase class I and II
PCGDLBEE_00148 1.4e-234 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PCGDLBEE_00149 2.5e-20 S EamA-like transporter family
PCGDLBEE_00150 1.6e-60 S EamA-like transporter family
PCGDLBEE_00152 4.4e-21
PCGDLBEE_00153 9e-217 rbsR K helix_turn _helix lactose operon repressor
PCGDLBEE_00154 3.5e-241 malE G Bacterial extracellular solute-binding protein
PCGDLBEE_00155 2.7e-163 malC U Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00156 8e-160 U Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00157 1.2e-243 bglA 3.2.1.21 G Glycosyl hydrolase family 1
PCGDLBEE_00158 1.6e-240 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
PCGDLBEE_00159 1.3e-69 S Nucleotidyltransferase substrate binding protein like
PCGDLBEE_00160 1.6e-45 S Nucleotidyltransferase domain
PCGDLBEE_00162 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
PCGDLBEE_00163 2.1e-142 K Bacterial regulatory proteins, tetR family
PCGDLBEE_00164 2.1e-254 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
PCGDLBEE_00165 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
PCGDLBEE_00166 7.7e-137 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PCGDLBEE_00167 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
PCGDLBEE_00168 1.8e-256 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PCGDLBEE_00169 3.7e-42 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PCGDLBEE_00170 4.1e-95 ywrO 1.6.5.2 S Flavodoxin-like fold
PCGDLBEE_00171 0.0 fadD 6.2.1.3 I AMP-binding enzyme
PCGDLBEE_00172 8.8e-63 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PCGDLBEE_00173 1.4e-77 F Nucleoside 2-deoxyribosyltransferase
PCGDLBEE_00175 1.6e-200 S Endonuclease/Exonuclease/phosphatase family
PCGDLBEE_00176 2.9e-179 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
PCGDLBEE_00177 1e-234 aspB E Aminotransferase class-V
PCGDLBEE_00178 6.5e-201 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
PCGDLBEE_00179 7.4e-88 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
PCGDLBEE_00180 4.5e-100 XK27_03610 K Acetyltransferase (GNAT) domain
PCGDLBEE_00181 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
PCGDLBEE_00182 3.4e-146 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
PCGDLBEE_00183 7.8e-249 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
PCGDLBEE_00184 6e-151 map 3.4.11.18 E Methionine aminopeptidase
PCGDLBEE_00185 1e-138 S Short repeat of unknown function (DUF308)
PCGDLBEE_00186 0.0 pepO 3.4.24.71 O Peptidase family M13
PCGDLBEE_00187 2.2e-117 L Single-strand binding protein family
PCGDLBEE_00188 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PCGDLBEE_00189 1.7e-200 pflA 1.97.1.4 O Radical SAM superfamily
PCGDLBEE_00190 5.1e-258 S AMMECR1
PCGDLBEE_00191 4.1e-267 recD2 3.6.4.12 L PIF1-like helicase
PCGDLBEE_00192 4.8e-122 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
PCGDLBEE_00193 4.8e-293 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PCGDLBEE_00194 2.1e-211 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
PCGDLBEE_00195 1.5e-118 ywlC 2.7.7.87 J Belongs to the SUA5 family
PCGDLBEE_00196 3.3e-124 livF E ATPases associated with a variety of cellular activities
PCGDLBEE_00197 1.8e-161 E Branched-chain amino acid ATP-binding cassette transporter
PCGDLBEE_00198 1e-188 livM U Belongs to the binding-protein-dependent transport system permease family
PCGDLBEE_00199 5.4e-111 U Belongs to the binding-protein-dependent transport system permease family
PCGDLBEE_00200 2.6e-206 livK E Receptor family ligand binding region
PCGDLBEE_00201 6.5e-154 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PCGDLBEE_00202 4.1e-190 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PCGDLBEE_00203 1.3e-36 rpmE J Binds the 23S rRNA
PCGDLBEE_00205 3.2e-66 yebQ EGP Major facilitator Superfamily
PCGDLBEE_00206 2.4e-147
PCGDLBEE_00207 5e-72 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PCGDLBEE_00208 4.2e-166 dkgB S Oxidoreductase, aldo keto reductase family protein
PCGDLBEE_00209 1.5e-18 lmrB U Major Facilitator Superfamily
PCGDLBEE_00210 3.4e-86 K Winged helix DNA-binding domain
PCGDLBEE_00211 1.5e-177 glkA 2.7.1.2 G ROK family
PCGDLBEE_00213 2.8e-305 EGP Major Facilitator Superfamily
PCGDLBEE_00214 0.0 yjjK S ATP-binding cassette protein, ChvD family
PCGDLBEE_00215 1.5e-169 tesB I Thioesterase-like superfamily
PCGDLBEE_00216 2.5e-92 S Protein of unknown function (DUF3180)
PCGDLBEE_00217 6.1e-263 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PCGDLBEE_00218 1.3e-159 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PCGDLBEE_00219 5.8e-106 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
PCGDLBEE_00221 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PCGDLBEE_00222 2.7e-97 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PCGDLBEE_00223 1.5e-206 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PCGDLBEE_00224 3.7e-250 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
PCGDLBEE_00225 4e-298
PCGDLBEE_00226 3.1e-190 natA V ATPases associated with a variety of cellular activities
PCGDLBEE_00227 2.3e-234 epsG M Glycosyl transferase family 21
PCGDLBEE_00228 2.8e-272 S AI-2E family transporter
PCGDLBEE_00229 2.3e-178 3.4.14.13 M Glycosyltransferase like family 2
PCGDLBEE_00230 1.2e-203 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
PCGDLBEE_00231 2.1e-262 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
PCGDLBEE_00234 4.5e-161 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PCGDLBEE_00236 2.6e-11
PCGDLBEE_00237 1.4e-20
PCGDLBEE_00238 4.7e-16
PCGDLBEE_00239 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
PCGDLBEE_00240 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
PCGDLBEE_00241 2.1e-285 lsgC M transferase activity, transferring glycosyl groups
PCGDLBEE_00242 1.8e-234 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
PCGDLBEE_00243 7.4e-144 rgpC U Transport permease protein
PCGDLBEE_00244 0.0 rgpF M Rhamnan synthesis protein F
PCGDLBEE_00245 5.8e-183 M Glycosyltransferase like family 2
PCGDLBEE_00246 1.5e-29 M Glycosyltransferase like family 2
PCGDLBEE_00247 1.6e-171 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PCGDLBEE_00248 1.9e-288 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PCGDLBEE_00249 1.2e-204 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PCGDLBEE_00250 0.0
PCGDLBEE_00251 5.6e-172 rfbJ M Glycosyl transferase family 2
PCGDLBEE_00252 1.7e-193 lytC 3.1.4.46, 3.2.1.17, 3.2.1.96 M Glycosyl hydrolases family 25
PCGDLBEE_00253 6.8e-230 K Cell envelope-related transcriptional attenuator domain
PCGDLBEE_00254 3.3e-256 V ABC transporter permease
PCGDLBEE_00255 8.1e-184 V ABC transporter
PCGDLBEE_00256 6e-140 T HD domain
PCGDLBEE_00257 1.8e-159 S Glutamine amidotransferase domain
PCGDLBEE_00258 0.0 kup P Transport of potassium into the cell
PCGDLBEE_00259 2e-185 tatD L TatD related DNase
PCGDLBEE_00260 0.0 yknV V ABC transporter
PCGDLBEE_00261 0.0 mdlA2 V ABC transporter
PCGDLBEE_00262 8.7e-270 S ATPase domain predominantly from Archaea
PCGDLBEE_00263 1.2e-252 S Domain of unknown function (DUF4143)
PCGDLBEE_00264 3.7e-192 G Glycosyl hydrolases family 43
PCGDLBEE_00265 1.4e-153 U Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00266 1.3e-176 U Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00267 1.8e-242 G Bacterial extracellular solute-binding protein
PCGDLBEE_00268 8.1e-196 K helix_turn _helix lactose operon repressor
PCGDLBEE_00269 0.0 lacZ 3.2.1.23 G Beta-galactosidase trimerisation domain
PCGDLBEE_00270 1.5e-266 S AAA domain
PCGDLBEE_00271 3.1e-54 EGP Major facilitator Superfamily
PCGDLBEE_00272 4e-34 EGP Major facilitator Superfamily
PCGDLBEE_00273 0.0 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
PCGDLBEE_00274 0.0 oppD P Belongs to the ABC transporter superfamily
PCGDLBEE_00275 3.2e-173 dppC EP N-terminal TM domain of oligopeptide transport permease C
PCGDLBEE_00276 1.8e-176 appB EP Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00277 1.2e-277 pepC 3.4.22.40 E Peptidase C1-like family
PCGDLBEE_00278 2.5e-46
PCGDLBEE_00279 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PCGDLBEE_00280 9.4e-121
PCGDLBEE_00281 6.5e-182 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PCGDLBEE_00283 1.1e-256 G MFS/sugar transport protein
PCGDLBEE_00284 8.1e-179 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PCGDLBEE_00285 0.0 lmrA2 V ABC transporter transmembrane region
PCGDLBEE_00286 0.0 lmrA1 V ABC transporter, ATP-binding protein
PCGDLBEE_00287 1.2e-91 ydgJ K helix_turn_helix multiple antibiotic resistance protein
PCGDLBEE_00288 9.5e-278 cycA E Amino acid permease
PCGDLBEE_00289 0.0 V FtsX-like permease family
PCGDLBEE_00290 7.5e-129 V ABC transporter
PCGDLBEE_00291 3.8e-268 aroP E aromatic amino acid transport protein AroP K03293
PCGDLBEE_00292 1.1e-104 S Protein of unknown function, DUF624
PCGDLBEE_00293 6.8e-153 rafG G ABC transporter permease
PCGDLBEE_00294 4.4e-147 malC G Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00295 5.3e-184 K Psort location Cytoplasmic, score
PCGDLBEE_00296 2.9e-254 amyE G Bacterial extracellular solute-binding protein
PCGDLBEE_00297 3.6e-102 G Phosphoglycerate mutase family
PCGDLBEE_00298 1.2e-59 S Protein of unknown function (DUF4235)
PCGDLBEE_00299 5.7e-138 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
PCGDLBEE_00300 0.0 pip S YhgE Pip domain protein
PCGDLBEE_00301 3.8e-278 pip S YhgE Pip domain protein
PCGDLBEE_00302 1.8e-40
PCGDLBEE_00303 1.6e-271 aspA 4.3.1.1 E Fumarase C C-terminus
PCGDLBEE_00304 1.2e-135 M Mechanosensitive ion channel
PCGDLBEE_00305 3.7e-185 S CAAX protease self-immunity
PCGDLBEE_00306 9.7e-239 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PCGDLBEE_00307 6.9e-151 U Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00308 9.9e-161 U Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00309 2.9e-218 P Bacterial extracellular solute-binding protein
PCGDLBEE_00310 9.1e-228 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PCGDLBEE_00311 4.6e-180 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
PCGDLBEE_00312 8.8e-189 plsC2 2.3.1.51 I Phosphate acyltransferases
PCGDLBEE_00313 3.6e-64 psp1 3.5.99.10 J Endoribonuclease L-PSP
PCGDLBEE_00316 6.9e-118 cyaA 4.6.1.1 S CYTH
PCGDLBEE_00317 1.1e-170 trxA2 O Tetratricopeptide repeat
PCGDLBEE_00318 2.5e-178
PCGDLBEE_00319 6.1e-179
PCGDLBEE_00320 3.6e-158 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
PCGDLBEE_00321 5.2e-130 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
PCGDLBEE_00322 9.4e-49 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PCGDLBEE_00323 6.1e-282 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PCGDLBEE_00324 6.1e-163 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PCGDLBEE_00325 1.3e-309 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PCGDLBEE_00326 3.5e-149 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PCGDLBEE_00327 1.8e-58 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PCGDLBEE_00328 1.7e-29 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PCGDLBEE_00329 1.9e-144 atpB C it plays a direct role in the translocation of protons across the membrane
PCGDLBEE_00330 2.3e-206 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PCGDLBEE_00332 0.0 K RNA polymerase II activating transcription factor binding
PCGDLBEE_00333 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
PCGDLBEE_00334 2.8e-90 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
PCGDLBEE_00335 1.1e-96 mntP P Probably functions as a manganese efflux pump
PCGDLBEE_00336 1.1e-116
PCGDLBEE_00337 4e-139 KT Transcriptional regulatory protein, C terminal
PCGDLBEE_00338 5.7e-126 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PCGDLBEE_00339 2.7e-280 E Bacterial extracellular solute-binding proteins, family 5 Middle
PCGDLBEE_00340 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PCGDLBEE_00341 0.0 S domain protein
PCGDLBEE_00342 1e-63 tyrA 5.4.99.5 E Chorismate mutase type II
PCGDLBEE_00343 5.4e-50 pabC 2.6.1.42, 4.1.3.38 EH Amino-transferase class IV
PCGDLBEE_00344 1.6e-35 L Helix-turn-helix domain
PCGDLBEE_00345 5.7e-21 L Helix-turn-helix domain
PCGDLBEE_00346 3.2e-131 rafA 3.2.1.22 G alpha-galactosidase
PCGDLBEE_00347 2.2e-114 araQ U Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00348 1.2e-120 lacF P Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00349 2.8e-153 araN G Bacterial extracellular solute-binding protein
PCGDLBEE_00350 5.1e-50 K helix_turn_helix, arabinose operon control protein
PCGDLBEE_00351 5.5e-116 L Transposase
PCGDLBEE_00352 1.3e-46 pabC 2.6.1.42, 4.1.3.38 EH Amino-transferase class IV
PCGDLBEE_00353 3.3e-291 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PCGDLBEE_00354 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
PCGDLBEE_00355 3.3e-52 S Protein of unknown function (DUF2469)
PCGDLBEE_00356 4e-195 2.3.1.57 J Acetyltransferase (GNAT) domain
PCGDLBEE_00357 5.6e-283 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PCGDLBEE_00358 4.6e-288 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PCGDLBEE_00359 4.1e-51 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PCGDLBEE_00360 3.3e-160 K Psort location Cytoplasmic, score
PCGDLBEE_00361 4.5e-178
PCGDLBEE_00362 5.4e-167 V ABC transporter
PCGDLBEE_00363 6.2e-155 spoU 2.1.1.185 J RNA methyltransferase TrmH family
PCGDLBEE_00364 1.6e-109 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PCGDLBEE_00365 1.6e-210 rmuC S RmuC family
PCGDLBEE_00366 9.6e-43 csoR S Metal-sensitive transcriptional repressor
PCGDLBEE_00367 0.0 pacS 1.9.3.1, 3.6.3.54 P E1-E2 ATPase
PCGDLBEE_00368 4e-117 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
PCGDLBEE_00370 2.7e-71 rplI J Binds to the 23S rRNA
PCGDLBEE_00371 2e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PCGDLBEE_00372 6.8e-76 ssb1 L Single-stranded DNA-binding protein
PCGDLBEE_00373 4.6e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
PCGDLBEE_00374 1.2e-27 L Integrase core domain
PCGDLBEE_00375 1.4e-223 glf 5.4.99.9 M UDP-galactopyranose mutase
PCGDLBEE_00376 7.9e-101 cps1D M Domain of unknown function (DUF4422)
PCGDLBEE_00377 1.3e-37 L Transposase and inactivated derivatives IS30 family
PCGDLBEE_00378 5.7e-109 3.1.3.48 T Low molecular weight phosphatase family
PCGDLBEE_00379 2.8e-310 rfbP 2.7.8.6 M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
PCGDLBEE_00380 0.0 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
PCGDLBEE_00381 3.3e-281 EGP Major facilitator Superfamily
PCGDLBEE_00382 2.6e-231 mntH P H( )-stimulated, divalent metal cation uptake system
PCGDLBEE_00383 1.8e-150 S Domain of unknown function (DUF4143)
PCGDLBEE_00384 2.1e-140 L Protein of unknown function (DUF1524)
PCGDLBEE_00385 1.6e-165 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
PCGDLBEE_00386 3.6e-191 K helix_turn _helix lactose operon repressor
PCGDLBEE_00387 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PCGDLBEE_00388 1.1e-102 malC G Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00389 7.1e-261 G Bacterial extracellular solute-binding protein
PCGDLBEE_00390 5.2e-38 EGP Major facilitator Superfamily
PCGDLBEE_00391 0.0 cydD V ABC transporter transmembrane region
PCGDLBEE_00394 3.6e-55 araE EGP Major facilitator Superfamily
PCGDLBEE_00395 0.0 fadD 6.2.1.3 I AMP-binding enzyme
PCGDLBEE_00396 3.6e-210 K helix_turn _helix lactose operon repressor
PCGDLBEE_00397 1e-159 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PCGDLBEE_00398 7.2e-164 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PCGDLBEE_00399 1.5e-59 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PCGDLBEE_00400 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00401 5.3e-259 abcT3 P ATPases associated with a variety of cellular activities
PCGDLBEE_00402 0.0 pgi 5.3.1.9 G Belongs to the GPI family
PCGDLBEE_00405 2.4e-176 S Auxin Efflux Carrier
PCGDLBEE_00406 6.6e-126 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PCGDLBEE_00407 7e-144 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
PCGDLBEE_00408 1.5e-247 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PCGDLBEE_00409 4.5e-117
PCGDLBEE_00410 6.3e-78 soxR K MerR, DNA binding
PCGDLBEE_00411 1.9e-197 yghZ C Aldo/keto reductase family
PCGDLBEE_00412 1.4e-47 S Protein of unknown function (DUF3039)
PCGDLBEE_00413 4.3e-86 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PCGDLBEE_00414 6.3e-76
PCGDLBEE_00415 7.6e-117 yceD S Uncharacterized ACR, COG1399
PCGDLBEE_00416 9.3e-21 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PCGDLBEE_00417 6.3e-134 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PCGDLBEE_00418 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
PCGDLBEE_00419 1.5e-92 ilvN 2.2.1.6 E ACT domain
PCGDLBEE_00420 3.9e-44 stbC S Plasmid stability protein
PCGDLBEE_00421 7.8e-73 vapC S Toxic component of a toxin-antitoxin (TA) module. An RNase
PCGDLBEE_00422 0.0 yjjK S ABC transporter
PCGDLBEE_00423 7.1e-137 guaA1 6.3.5.2 F Peptidase C26
PCGDLBEE_00424 0.0 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
PCGDLBEE_00425 2.3e-162 P Cation efflux family
PCGDLBEE_00426 9e-266 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PCGDLBEE_00427 4.2e-213 S Endonuclease/Exonuclease/phosphatase family
PCGDLBEE_00428 7e-62 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PCGDLBEE_00429 1e-34 CP_0960 S Belongs to the UPF0109 family
PCGDLBEE_00430 6.4e-108 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PCGDLBEE_00431 1.9e-200 iunH1 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PCGDLBEE_00432 4.1e-169 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
PCGDLBEE_00433 3.1e-20
PCGDLBEE_00434 4.4e-58 S Predicted membrane protein (DUF2207)
PCGDLBEE_00435 8.2e-59 S Predicted membrane protein (DUF2207)
PCGDLBEE_00436 9.9e-12 S Predicted membrane protein (DUF2207)
PCGDLBEE_00437 0.0 S Predicted membrane protein (DUF2207)
PCGDLBEE_00438 1.3e-89 lemA S LemA family
PCGDLBEE_00440 2e-18 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PCGDLBEE_00441 5e-84 L Transposase and inactivated derivatives IS30 family
PCGDLBEE_00442 6.5e-12 S Psort location Extracellular, score 8.82
PCGDLBEE_00444 8.1e-36 K Bacterial regulatory proteins, lacI family
PCGDLBEE_00445 2.6e-85 K Bacterial regulatory proteins, lacI family
PCGDLBEE_00446 1.1e-156 P Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00447 7.4e-175 P Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00448 4.4e-266 G Bacterial extracellular solute-binding protein
PCGDLBEE_00449 6.8e-245 4.2.1.68 M Enolase C-terminal domain-like
PCGDLBEE_00450 5.8e-146 IQ KR domain
PCGDLBEE_00451 4.1e-111 S Amidohydrolase
PCGDLBEE_00452 7.7e-163 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
PCGDLBEE_00453 0.0 3.2.1.51 GH95 G Glycosyl hydrolase family 65, N-terminal domain
PCGDLBEE_00454 2.2e-156 yvgN 1.1.1.346 S Aldo/keto reductase family
PCGDLBEE_00455 1.1e-53 acyP 3.6.1.7 C Acylphosphatase
PCGDLBEE_00456 1.1e-253 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PCGDLBEE_00457 1.8e-220 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PCGDLBEE_00458 2.7e-111 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
PCGDLBEE_00459 2.3e-99
PCGDLBEE_00460 3.4e-120 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PCGDLBEE_00461 8.3e-131 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
PCGDLBEE_00462 1.6e-279 S Uncharacterized protein conserved in bacteria (DUF2252)
PCGDLBEE_00463 2.1e-265 glnA2 6.3.1.2 E glutamine synthetase
PCGDLBEE_00464 1.9e-217 EGP Major facilitator Superfamily
PCGDLBEE_00465 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
PCGDLBEE_00466 3.4e-123 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
PCGDLBEE_00467 6.9e-273 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PCGDLBEE_00468 1.5e-175 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
PCGDLBEE_00469 4.1e-162 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PCGDLBEE_00470 8.4e-128 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PCGDLBEE_00471 7.4e-46 M Lysin motif
PCGDLBEE_00472 8.4e-78 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PCGDLBEE_00473 7.5e-230 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
PCGDLBEE_00474 0.0 L DNA helicase
PCGDLBEE_00475 1.3e-93 mraZ K Belongs to the MraZ family
PCGDLBEE_00476 1.8e-190 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PCGDLBEE_00477 1.3e-65 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
PCGDLBEE_00478 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
PCGDLBEE_00479 2.6e-155 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PCGDLBEE_00480 2e-240 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PCGDLBEE_00481 1.7e-204 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PCGDLBEE_00482 4.3e-272 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PCGDLBEE_00483 1.5e-225 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
PCGDLBEE_00484 1.1e-217 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PCGDLBEE_00485 7.5e-283 murC 6.3.2.8 M Belongs to the MurCDEF family
PCGDLBEE_00486 8.1e-172 ftsQ 6.3.2.4 D Cell division protein FtsQ
PCGDLBEE_00487 7e-15
PCGDLBEE_00488 9.5e-44 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PCGDLBEE_00489 2.3e-167 2.7.1.4 G pfkB family carbohydrate kinase
PCGDLBEE_00490 5e-221 GK ROK family
PCGDLBEE_00491 2.2e-165 2.7.1.2 GK ROK family
PCGDLBEE_00492 1.5e-208 GK ROK family
PCGDLBEE_00493 1.8e-150 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PCGDLBEE_00494 6.1e-246 nagA 3.5.1.25 G Amidohydrolase family
PCGDLBEE_00495 3.1e-95 3.6.1.55 F NUDIX domain
PCGDLBEE_00496 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
PCGDLBEE_00497 3.4e-302 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
PCGDLBEE_00498 0.0 smc D Required for chromosome condensation and partitioning
PCGDLBEE_00499 1.1e-44 V Acetyltransferase (GNAT) domain
PCGDLBEE_00500 6.9e-192 V Acetyltransferase (GNAT) domain
PCGDLBEE_00501 5.2e-292 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PCGDLBEE_00502 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
PCGDLBEE_00503 8e-174 3.4.22.70 M Sortase family
PCGDLBEE_00504 0.0 M domain protein
PCGDLBEE_00505 0.0 M cell wall anchor domain protein
PCGDLBEE_00507 1.5e-186 K Psort location Cytoplasmic, score
PCGDLBEE_00508 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
PCGDLBEE_00509 3.7e-204 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PCGDLBEE_00510 2.4e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PCGDLBEE_00511 1.8e-251 yhjE EGP Sugar (and other) transporter
PCGDLBEE_00512 3.7e-180 K helix_turn _helix lactose operon repressor
PCGDLBEE_00513 1.7e-277 scrT G Transporter major facilitator family protein
PCGDLBEE_00514 4.1e-297 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
PCGDLBEE_00515 6e-202 K helix_turn _helix lactose operon repressor
PCGDLBEE_00516 7.2e-51 natB E Receptor family ligand binding region
PCGDLBEE_00517 8.7e-58 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PCGDLBEE_00518 4.4e-141 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PCGDLBEE_00519 4.5e-280 clcA P Voltage gated chloride channel
PCGDLBEE_00520 2e-244 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PCGDLBEE_00521 2.4e-195 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
PCGDLBEE_00522 1.2e-166 yicL EG EamA-like transporter family
PCGDLBEE_00524 9.9e-169 htpX O Belongs to the peptidase M48B family
PCGDLBEE_00525 1e-276 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
PCGDLBEE_00526 0.0 cadA P E1-E2 ATPase
PCGDLBEE_00527 1.4e-228 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
PCGDLBEE_00528 1e-259 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PCGDLBEE_00530 8.3e-146 yplQ S Haemolysin-III related
PCGDLBEE_00531 3.7e-88 yjcF Q Acetyltransferase (GNAT) domain
PCGDLBEE_00532 3.5e-52 ybjQ S Putative heavy-metal-binding
PCGDLBEE_00533 3.4e-166 dcm 2.1.1.37 L Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
PCGDLBEE_00534 3e-125 S Domain of unknown function (DUF4928)
PCGDLBEE_00535 1.2e-173 L Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PCGDLBEE_00536 2.1e-259 L Z1 domain
PCGDLBEE_00537 3.4e-32 S Putative PD-(D/E)XK family member, (DUF4420)
PCGDLBEE_00538 1e-32 S Putative PD-(D/E)XK family member, (DUF4420)
PCGDLBEE_00539 2.3e-241 S AIPR protein
PCGDLBEE_00540 1e-175 dcm 2.1.1.37 H C-5 cytosine-specific DNA methylase
PCGDLBEE_00541 8.3e-164 M Glycosyltransferase like family 2
PCGDLBEE_00542 8.8e-198 S Fic/DOC family
PCGDLBEE_00543 1.1e-130 S Pyridoxamine 5'-phosphate oxidase
PCGDLBEE_00544 6.9e-200 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PCGDLBEE_00545 0.0 lysX S Uncharacterised conserved protein (DUF2156)
PCGDLBEE_00546 4.3e-253 S Putative esterase
PCGDLBEE_00547 7.1e-20
PCGDLBEE_00548 7.2e-170 yddG EG EamA-like transporter family
PCGDLBEE_00549 3.4e-91 hsp20 O Hsp20/alpha crystallin family
PCGDLBEE_00550 2.9e-212 pldB 3.1.1.5 I Serine aminopeptidase, S33
PCGDLBEE_00551 2.7e-10 L Transposase DDE domain
PCGDLBEE_00552 1.7e-142 3.5.2.10 S Creatinine amidohydrolase
PCGDLBEE_00553 0.0 3.1.3.5 F 5'-nucleotidase, C-terminal domain
PCGDLBEE_00554 1.2e-210 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
PCGDLBEE_00555 4.3e-253 hisS 6.1.1.21 J Histidyl-tRNA synthetase
PCGDLBEE_00556 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PCGDLBEE_00557 5.2e-101 S Aminoacyl-tRNA editing domain
PCGDLBEE_00558 7.6e-152 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
PCGDLBEE_00559 1.1e-144 gluB ET Belongs to the bacterial solute-binding protein 3 family
PCGDLBEE_00560 3.4e-110 gluC E Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00561 1.2e-194 gluD E Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00562 9.9e-291 phoN I PAP2 superfamily
PCGDLBEE_00563 5.1e-111 argO S LysE type translocator
PCGDLBEE_00564 3.5e-285 ydfD EK Alanine-glyoxylate amino-transferase
PCGDLBEE_00565 1.5e-197 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
PCGDLBEE_00566 0.0 helY L DEAD DEAH box helicase
PCGDLBEE_00567 7.5e-250 rarA L Recombination factor protein RarA
PCGDLBEE_00568 6.9e-11 KT Transcriptional regulatory protein, C terminal
PCGDLBEE_00569 2.1e-34 mtrB 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PCGDLBEE_00570 5.5e-251 EGP Major facilitator Superfamily
PCGDLBEE_00571 3.8e-187 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PCGDLBEE_00572 6.9e-52
PCGDLBEE_00573 1.6e-53 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
PCGDLBEE_00574 3.1e-47 yhbY J CRS1_YhbY
PCGDLBEE_00575 0.0 ecfA GP ABC transporter, ATP-binding protein
PCGDLBEE_00576 1.3e-93 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PCGDLBEE_00577 6.4e-198 S Glycosyltransferase, group 2 family protein
PCGDLBEE_00578 2.5e-149 C Putative TM nitroreductase
PCGDLBEE_00579 3.2e-141 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
PCGDLBEE_00580 3e-303 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
PCGDLBEE_00581 6.2e-241 lacY P LacY proton/sugar symporter
PCGDLBEE_00582 1.8e-195 K helix_turn _helix lactose operon repressor
PCGDLBEE_00583 6.6e-257 O SERine Proteinase INhibitors
PCGDLBEE_00584 1.3e-190
PCGDLBEE_00585 6.1e-123 K helix_turn_helix, Lux Regulon
PCGDLBEE_00586 8.3e-215 2.7.13.3 T Histidine kinase
PCGDLBEE_00587 7.1e-248 ydjK G Sugar (and other) transporter
PCGDLBEE_00588 4.7e-61 S Thiamine-binding protein
PCGDLBEE_00589 1e-140 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PCGDLBEE_00590 1.6e-227 O AAA domain (Cdc48 subfamily)
PCGDLBEE_00591 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PCGDLBEE_00592 1e-157 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PCGDLBEE_00593 3.3e-296 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
PCGDLBEE_00594 2.8e-248 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PCGDLBEE_00595 1.2e-211 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PCGDLBEE_00596 6.6e-68 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PCGDLBEE_00597 4.9e-45 yggT S YGGT family
PCGDLBEE_00598 4.9e-20 tccB2 V DivIVA protein
PCGDLBEE_00599 1.6e-89 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PCGDLBEE_00600 9e-178 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PCGDLBEE_00601 2.4e-200 K WYL domain
PCGDLBEE_00602 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
PCGDLBEE_00603 5.3e-68 yneG S Domain of unknown function (DUF4186)
PCGDLBEE_00604 1e-167 dkgA 1.1.1.346 C Aldo/keto reductase family
PCGDLBEE_00605 0.0 4.2.1.53 S MCRA family
PCGDLBEE_00606 4e-251 proP EGP Sugar (and other) transporter
PCGDLBEE_00608 1.4e-281 purR QT Purine catabolism regulatory protein-like family
PCGDLBEE_00609 5.7e-255 codA 3.5.4.1, 3.5.4.21 F Amidohydrolase family
PCGDLBEE_00610 0.0 clpC O ATPase family associated with various cellular activities (AAA)
PCGDLBEE_00611 5.4e-178 uspA T Belongs to the universal stress protein A family
PCGDLBEE_00612 9e-179 S Protein of unknown function (DUF3027)
PCGDLBEE_00613 1.7e-66 cspB K 'Cold-shock' DNA-binding domain
PCGDLBEE_00614 1.6e-309 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PCGDLBEE_00615 4.4e-132 KT Response regulator receiver domain protein
PCGDLBEE_00616 5.1e-100
PCGDLBEE_00617 4.2e-33 S Proteins of 100 residues with WXG
PCGDLBEE_00618 2.7e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PCGDLBEE_00619 6.1e-38 K 'Cold-shock' DNA-binding domain
PCGDLBEE_00620 3.1e-84 S LytR cell envelope-related transcriptional attenuator
PCGDLBEE_00621 1.9e-132 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PCGDLBEE_00622 1.4e-187 moxR S ATPase family associated with various cellular activities (AAA)
PCGDLBEE_00623 1.3e-163 S Protein of unknown function DUF58
PCGDLBEE_00624 2.6e-84
PCGDLBEE_00625 8.8e-190 S von Willebrand factor (vWF) type A domain
PCGDLBEE_00626 2.5e-152 S von Willebrand factor (vWF) type A domain
PCGDLBEE_00627 3.1e-56
PCGDLBEE_00628 4.4e-254 S PGAP1-like protein
PCGDLBEE_00629 2.9e-111 ykoE S ABC-type cobalt transport system, permease component
PCGDLBEE_00630 2.7e-277 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
PCGDLBEE_00631 0.0 S Lysylphosphatidylglycerol synthase TM region
PCGDLBEE_00632 8.1e-42 hup L Belongs to the bacterial histone-like protein family
PCGDLBEE_00633 1.5e-283 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
PCGDLBEE_00635 8.9e-175 hisN 3.1.3.25 G Inositol monophosphatase family
PCGDLBEE_00636 0.0 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
PCGDLBEE_00637 6.1e-134 alsE 5.1.3.1 G Ribulose-phosphate 3 epimerase family
PCGDLBEE_00638 4.8e-162 G Phosphotransferase System
PCGDLBEE_00639 2.1e-46 fruA 2.7.1.202 G PTS system, Lactose/Cellobiose specific IIB subunit
PCGDLBEE_00640 4e-78 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PCGDLBEE_00641 2.6e-71 H Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PCGDLBEE_00642 5.8e-280 manR K PRD domain
PCGDLBEE_00643 1.8e-133 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PCGDLBEE_00644 2.6e-286 arc O AAA ATPase forming ring-shaped complexes
PCGDLBEE_00645 2.5e-124 apl 3.1.3.1 S SNARE associated Golgi protein
PCGDLBEE_00646 1.4e-117 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
PCGDLBEE_00647 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PCGDLBEE_00648 4.3e-132 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PCGDLBEE_00649 1.2e-183 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PCGDLBEE_00650 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
PCGDLBEE_00651 4.2e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PCGDLBEE_00652 1.1e-228 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PCGDLBEE_00653 2.5e-166 G Fic/DOC family
PCGDLBEE_00654 1.2e-13 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
PCGDLBEE_00655 3.7e-18 L Belongs to the 'phage' integrase family
PCGDLBEE_00656 9e-87 2.7.11.1 S HipA-like C-terminal domain
PCGDLBEE_00661 5.1e-142 S Fic/DOC family
PCGDLBEE_00662 1e-136 L PFAM Relaxase mobilization nuclease family protein
PCGDLBEE_00663 7.7e-109 K Bacterial regulatory proteins, tetR family
PCGDLBEE_00664 3.3e-124 V ABC transporter
PCGDLBEE_00665 0.0 V FtsX-like permease family
PCGDLBEE_00667 6.2e-196 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PCGDLBEE_00668 1.4e-104 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
PCGDLBEE_00669 1.9e-158 yeaZ 2.3.1.234 O Glycoprotease family
PCGDLBEE_00670 2.6e-87 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
PCGDLBEE_00671 9e-173 holA 2.7.7.7 L DNA polymerase III delta subunit
PCGDLBEE_00672 2.6e-308 comE S Competence protein
PCGDLBEE_00673 4.9e-81 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
PCGDLBEE_00674 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PCGDLBEE_00675 2.3e-159 ET Bacterial periplasmic substrate-binding proteins
PCGDLBEE_00676 5.3e-170 corA P CorA-like Mg2+ transporter protein
PCGDLBEE_00677 5.4e-166 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PCGDLBEE_00678 2.9e-232 L ribosomal rna small subunit methyltransferase
PCGDLBEE_00679 2e-70 pdxH S Pfam:Pyridox_oxidase
PCGDLBEE_00680 4.9e-168 EG EamA-like transporter family
PCGDLBEE_00681 2.6e-129 C Putative TM nitroreductase
PCGDLBEE_00682 1.1e-31
PCGDLBEE_00683 1.7e-256 S Metal-independent alpha-mannosidase (GH125)
PCGDLBEE_00684 6.1e-243 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
PCGDLBEE_00685 6e-205 K helix_turn _helix lactose operon repressor
PCGDLBEE_00686 0.0 3.2.1.96 G Glycosyl hydrolase family 85
PCGDLBEE_00687 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PCGDLBEE_00688 1.9e-263 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
PCGDLBEE_00689 6.7e-156 lacG G Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00690 4.3e-172 malC G Binding-protein-dependent transport system inner membrane component
PCGDLBEE_00691 3e-245 srrA1 G Bacterial extracellular solute-binding protein
PCGDLBEE_00692 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
PCGDLBEE_00693 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
PCGDLBEE_00694 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
PCGDLBEE_00695 7.1e-86 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PCGDLBEE_00696 3.4e-50 S Appr-1'-p processing enzyme
PCGDLBEE_00697 6.6e-39 L Psort location Cytoplasmic, score 8.87
PCGDLBEE_00698 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
PCGDLBEE_00699 2e-129 fhaA T Protein of unknown function (DUF2662)
PCGDLBEE_00700 1e-74 fhaB T Inner membrane component of T3SS, cytoplasmic domain
PCGDLBEE_00701 1.8e-271 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
PCGDLBEE_00702 1e-277 rodA D Belongs to the SEDS family
PCGDLBEE_00703 4.5e-261 pbpA M penicillin-binding protein
PCGDLBEE_00704 1.3e-171 T Protein tyrosine kinase
PCGDLBEE_00705 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
PCGDLBEE_00706 2.9e-119 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
PCGDLBEE_00707 3.8e-229 srtA 3.4.22.70 M Sortase family
PCGDLBEE_00708 6.4e-107 S Bacterial protein of unknown function (DUF881)
PCGDLBEE_00709 7.5e-69 crgA D Involved in cell division
PCGDLBEE_00710 3e-120 gluP 3.4.21.105 S Rhomboid family
PCGDLBEE_00711 4.5e-35
PCGDLBEE_00712 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PCGDLBEE_00713 3.7e-72 I Sterol carrier protein
PCGDLBEE_00714 2.5e-224 EGP Major Facilitator Superfamily
PCGDLBEE_00715 3.2e-209 2.7.13.3 T Histidine kinase
PCGDLBEE_00716 5.5e-113 K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PCGDLBEE_00717 1.2e-38 S Protein of unknown function (DUF3073)
PCGDLBEE_00718 5.5e-203 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PCGDLBEE_00719 3.3e-289 S Amidohydrolase family
PCGDLBEE_00720 3.2e-157 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
PCGDLBEE_00721 4e-44 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PCGDLBEE_00722 0.0 yjjP S Threonine/Serine exporter, ThrE
PCGDLBEE_00723 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PCGDLBEE_00724 1.9e-308 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PCGDLBEE_00725 2.5e-92 S AAA domain
PCGDLBEE_00726 0.0 yliE T Putative diguanylate phosphodiesterase
PCGDLBEE_00727 2.3e-108 S Domain of unknown function (DUF4956)
PCGDLBEE_00728 7.4e-152 P VTC domain
PCGDLBEE_00729 3.1e-304 cotH M CotH kinase protein
PCGDLBEE_00730 2.1e-272 pelG S Putative exopolysaccharide Exporter (EPS-E)
PCGDLBEE_00731 4.5e-252 pelF GT4 M Domain of unknown function (DUF3492)
PCGDLBEE_00732 1.3e-14 pelF GT4 M Domain of unknown function (DUF3492)
PCGDLBEE_00733 0.0 S Uncharacterised protein conserved in bacteria (DUF2194)
PCGDLBEE_00734 5.7e-161
PCGDLBEE_00735 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
PCGDLBEE_00736 1.6e-127
PCGDLBEE_00737 8.5e-100
PCGDLBEE_00738 1.5e-19 S Psort location CytoplasmicMembrane, score
PCGDLBEE_00739 8e-94 rpoE4 K Sigma-70 region 2
PCGDLBEE_00740 4.6e-26 2.7.13.3 T Histidine kinase
PCGDLBEE_00741 1.4e-49 S Bacterial toxin of type II toxin-antitoxin system, YafQ
PCGDLBEE_00742 2.1e-39 relB L RelB antitoxin
PCGDLBEE_00743 2.5e-43 V MacB-like periplasmic core domain
PCGDLBEE_00744 3.3e-100 S Acetyltransferase (GNAT) domain
PCGDLBEE_00745 4.5e-25 S Uncharacterized protein conserved in bacteria (DUF2316)
PCGDLBEE_00746 1.5e-35 cefD 5.1.1.17 E Aminotransferase class-V
PCGDLBEE_00747 4e-14 cefD 5.1.1.17 E Aminotransferase, class V
PCGDLBEE_00748 3.5e-188 V VanZ like family
PCGDLBEE_00750 2.6e-258 mmuP E amino acid
PCGDLBEE_00751 6.3e-154 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PCGDLBEE_00752 6.5e-133 S SOS response associated peptidase (SRAP)
PCGDLBEE_00753 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PCGDLBEE_00754 4.6e-160 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PCGDLBEE_00755 5.3e-186 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PCGDLBEE_00756 9.4e-113 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
PCGDLBEE_00757 9.9e-42 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
PCGDLBEE_00758 8.7e-156 hisG 2.4.2.17 F ATP phosphoribosyltransferase
PCGDLBEE_00759 7.3e-104 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PCGDLBEE_00760 3.9e-168 S Bacterial protein of unknown function (DUF881)
PCGDLBEE_00761 3.9e-35 sbp S Protein of unknown function (DUF1290)
PCGDLBEE_00762 2.2e-140 S Bacterial protein of unknown function (DUF881)
PCGDLBEE_00763 6.7e-75 garA T Inner membrane component of T3SS, cytoplasmic domain
PCGDLBEE_00764 1.1e-110 K helix_turn_helix, mercury resistance
PCGDLBEE_00765 1.5e-65
PCGDLBEE_00766 2.6e-35
PCGDLBEE_00767 1.1e-138 pgp 3.1.3.18 S HAD-hyrolase-like
PCGDLBEE_00768 5.1e-62 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
PCGDLBEE_00769 0.0 helY L DEAD DEAH box helicase
PCGDLBEE_00770 6.8e-53
PCGDLBEE_00771 0.0 pafB K WYL domain
PCGDLBEE_00772 2.5e-291 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
PCGDLBEE_00773 1.6e-162 supH S Sucrose-6F-phosphate phosphohydrolase
PCGDLBEE_00775 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
PCGDLBEE_00776 4.5e-143 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PCGDLBEE_00777 4.7e-118 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PCGDLBEE_00778 4.1e-31
PCGDLBEE_00779 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PCGDLBEE_00780 4.7e-233
PCGDLBEE_00781 2.9e-165 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PCGDLBEE_00782 3.1e-223 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PCGDLBEE_00783 3e-99 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PCGDLBEE_00784 3.6e-52 yajC U Preprotein translocase subunit
PCGDLBEE_00785 2e-197 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PCGDLBEE_00786 2.7e-106 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PCGDLBEE_00787 2.7e-100 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PCGDLBEE_00788 2e-111 yebC K transcriptional regulatory protein
PCGDLBEE_00789 1.2e-111 hit 2.7.7.53 FG HIT domain
PCGDLBEE_00790 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PCGDLBEE_00796 1.5e-133 S PAC2 family
PCGDLBEE_00797 1.8e-156 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PCGDLBEE_00798 9.6e-157 G Fructosamine kinase
PCGDLBEE_00799 6.8e-212 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PCGDLBEE_00800 3.7e-191 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PCGDLBEE_00801 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
PCGDLBEE_00802 3.6e-202 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PCGDLBEE_00803 3.3e-234 brnQ U Component of the transport system for branched-chain amino acids
PCGDLBEE_00804 2.5e-185
PCGDLBEE_00805 1.2e-299 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
PCGDLBEE_00806 4.9e-159 S Sucrose-6F-phosphate phosphohydrolase
PCGDLBEE_00807 2.5e-175 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PCGDLBEE_00808 2.7e-33 secG U Preprotein translocase SecG subunit
PCGDLBEE_00809 6e-146 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PCGDLBEE_00810 1e-218 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
PCGDLBEE_00811 3.5e-169 whiA K May be required for sporulation
PCGDLBEE_00812 1.1e-178 rapZ S Displays ATPase and GTPase activities
PCGDLBEE_00813 6.2e-190 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
PCGDLBEE_00814 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PCGDLBEE_00815 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PCGDLBEE_00816 5.5e-233 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
PCGDLBEE_00817 1.1e-89 XK27_08585 S Hypothetical bacterial integral membrane protein (Trep_Strep)
PCGDLBEE_00818 6.1e-21 G ATPases associated with a variety of cellular activities
PCGDLBEE_00819 1.2e-129 S Enoyl-(Acyl carrier protein) reductase
PCGDLBEE_00820 6.4e-301 ybiT S ABC transporter
PCGDLBEE_00821 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PCGDLBEE_00822 9.4e-123 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PCGDLBEE_00823 9.4e-172 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
PCGDLBEE_00824 2.4e-217 MA20_36090 S Psort location Cytoplasmic, score 8.87
PCGDLBEE_00825 9e-29
PCGDLBEE_00826 5e-125 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PCGDLBEE_00827 4e-181 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PCGDLBEE_00828 6.9e-158 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
PCGDLBEE_00829 2.7e-174 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
PCGDLBEE_00830 9.1e-289 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PCGDLBEE_00831 7e-74 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
PCGDLBEE_00832 1.6e-177 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PCGDLBEE_00833 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
PCGDLBEE_00834 4.8e-187 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PCGDLBEE_00835 1.6e-162 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
PCGDLBEE_00836 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PCGDLBEE_00838 5.8e-100 sixA 3.6.1.55 T Phosphoglycerate mutase family
PCGDLBEE_00839 9.4e-200 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
PCGDLBEE_00840 1.3e-133 S Phospholipase/Carboxylesterase
PCGDLBEE_00842 2e-140 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PCGDLBEE_00843 9.3e-146 S phosphoesterase or phosphohydrolase
PCGDLBEE_00844 5e-90 S Appr-1'-p processing enzyme
PCGDLBEE_00845 1.5e-177 I alpha/beta hydrolase fold
PCGDLBEE_00846 4.4e-25
PCGDLBEE_00848 2.2e-82 L Transposase, Mutator family
PCGDLBEE_00849 1.2e-141
PCGDLBEE_00850 3.6e-94 bcp 1.11.1.15 O Redoxin
PCGDLBEE_00851 1e-156 S Sucrose-6F-phosphate phosphohydrolase
PCGDLBEE_00852 1.9e-158 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
PCGDLBEE_00853 7.3e-244 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
PCGDLBEE_00854 8.6e-81
PCGDLBEE_00855 0.0 S Glycosyl hydrolases related to GH101 family, GH129
PCGDLBEE_00856 0.0 E ABC transporter, substrate-binding protein, family 5
PCGDLBEE_00857 5.4e-44
PCGDLBEE_00859 1.4e-305 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
PCGDLBEE_00860 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
PCGDLBEE_00861 1.2e-191 K helix_turn _helix lactose operon repressor
PCGDLBEE_00863 4.1e-253 hemN H Involved in the biosynthesis of porphyrin-containing compound
PCGDLBEE_00864 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PCGDLBEE_00865 5.8e-34 rpsT J Binds directly to 16S ribosomal RNA
PCGDLBEE_00866 8.8e-139 S UPF0126 domain
PCGDLBEE_00867 2.2e-141 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
PCGDLBEE_00868 1.6e-226 ilvE 2.6.1.42 E Amino-transferase class IV
PCGDLBEE_00869 2.7e-93 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PCGDLBEE_00870 9.2e-234 yhjX EGP Major facilitator Superfamily
PCGDLBEE_00871 3.3e-232 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
PCGDLBEE_00872 3e-42 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
PCGDLBEE_00873 9e-204 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
PCGDLBEE_00874 0.0 fadD 6.2.1.3 I AMP-binding enzyme
PCGDLBEE_00875 2.8e-185 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PCGDLBEE_00876 4.3e-248 corC S CBS domain
PCGDLBEE_00877 4.7e-102 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PCGDLBEE_00878 2.7e-216 phoH T PhoH-like protein
PCGDLBEE_00879 4.4e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
PCGDLBEE_00880 6.8e-148 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PCGDLBEE_00882 3.3e-166 spoU 2.1.1.185 J SpoU rRNA Methylase family
PCGDLBEE_00883 4.4e-241 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PCGDLBEE_00884 3.2e-109 yitW S Iron-sulfur cluster assembly protein
PCGDLBEE_00885 4e-101 iscU C SUF system FeS assembly protein, NifU family
PCGDLBEE_00886 5.5e-239 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PCGDLBEE_00887 7e-144 sufC O FeS assembly ATPase SufC
PCGDLBEE_00888 7.3e-236 sufD O FeS assembly protein SufD
PCGDLBEE_00889 1.5e-291 sufB O FeS assembly protein SufB
PCGDLBEE_00890 4.5e-311 S L,D-transpeptidase catalytic domain
PCGDLBEE_00891 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PCGDLBEE_00892 2.4e-14 feoB P transporter of a GTP-driven Fe(2 ) uptake system
PCGDLBEE_00893 8.3e-131 S Sulfite exporter TauE/SafE
PCGDLBEE_00894 1.4e-62 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PCGDLBEE_00896 6.2e-236 EGP Major facilitator Superfamily
PCGDLBEE_00897 1.5e-106 3.1.3.27 E haloacid dehalogenase-like hydrolase
PCGDLBEE_00898 1.4e-161 3.1.3.73 G Phosphoglycerate mutase family
PCGDLBEE_00899 4.2e-234 rutG F Permease family
PCGDLBEE_00900 1.8e-308 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
PCGDLBEE_00901 6.2e-254 nplT G Alpha amylase, catalytic domain
PCGDLBEE_00902 2.8e-188 pit P Phosphate transporter family
PCGDLBEE_00903 4.3e-112 MA20_27875 P Protein of unknown function DUF47
PCGDLBEE_00904 1.8e-113 K helix_turn_helix, Lux Regulon
PCGDLBEE_00905 1.1e-216 T Histidine kinase
PCGDLBEE_00906 1.8e-10 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
PCGDLBEE_00907 5.1e-176 V ATPases associated with a variety of cellular activities
PCGDLBEE_00908 3.3e-220 V ABC-2 family transporter protein
PCGDLBEE_00909 3.6e-226 V ABC-2 family transporter protein
PCGDLBEE_00910 1e-281 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PCGDLBEE_00911 2e-47 E lipolytic protein G-D-S-L family
PCGDLBEE_00912 1.9e-196
PCGDLBEE_00913 1.1e-110 3.4.13.21 E Peptidase family S51
PCGDLBEE_00914 1e-105 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
PCGDLBEE_00915 3.1e-162 M pfam nlp p60
PCGDLBEE_00916 1.1e-152 I Serine aminopeptidase, S33
PCGDLBEE_00917 3.4e-45 S Protein of unknown function (DUF2975)
PCGDLBEE_00918 3.7e-241 pbuX F Permease family
PCGDLBEE_00919 1.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PCGDLBEE_00920 0.0 pcrA 3.6.4.12 L DNA helicase
PCGDLBEE_00921 6.9e-63 S Domain of unknown function (DUF4418)
PCGDLBEE_00922 8.2e-216 V FtsX-like permease family
PCGDLBEE_00923 4.1e-151 lolD V ABC transporter
PCGDLBEE_00924 1.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PCGDLBEE_00925 1.3e-150 S Peptidase C26
PCGDLBEE_00926 5.7e-70 3.5.4.5 F cytidine deaminase activity
PCGDLBEE_00927 1.5e-45 sdpI S SdpI/YhfL protein family
PCGDLBEE_00928 1.2e-111 E Transglutaminase-like superfamily
PCGDLBEE_00929 3e-65 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PCGDLBEE_00930 1.2e-48 relB L RelB antitoxin
PCGDLBEE_00931 1.9e-129 pgm3 G Phosphoglycerate mutase family
PCGDLBEE_00932 2.3e-55 WQ51_05790 S Bacterial protein of unknown function (DUF948)
PCGDLBEE_00933 1.6e-35
PCGDLBEE_00934 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PCGDLBEE_00935 2.7e-71 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PCGDLBEE_00936 1.1e-193 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PCGDLBEE_00937 1.8e-70 3.4.23.43 S Type IV leader peptidase family
PCGDLBEE_00938 4.7e-216 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PCGDLBEE_00939 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PCGDLBEE_00940 2.2e-78 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
PCGDLBEE_00941 1.3e-94 K Psort location Cytoplasmic, score
PCGDLBEE_00942 6e-99 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
PCGDLBEE_00943 5.6e-54 sdpI S SdpI/YhfL protein family
PCGDLBEE_00944 1.5e-67 2.7.13.3 T Histidine kinase
PCGDLBEE_00945 9.2e-95 K helix_turn_helix, Lux Regulon
PCGDLBEE_00946 3.5e-90 ydaF_1 J Acetyltransferase (GNAT) domain
PCGDLBEE_00947 1.2e-46 S Protein of unknown function (DUF2089)
PCGDLBEE_00948 2.6e-37
PCGDLBEE_00949 4.3e-129 S EamA-like transporter family
PCGDLBEE_00950 1.8e-102
PCGDLBEE_00951 4.6e-129
PCGDLBEE_00952 6.4e-122 V ATPases associated with a variety of cellular activities
PCGDLBEE_00953 2.5e-15 fic D Fic/DOC family
PCGDLBEE_00954 1.5e-22
PCGDLBEE_00955 5.4e-93
PCGDLBEE_00956 3e-31 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
PCGDLBEE_00957 2.9e-116 XK27_07525 3.6.1.55 F Hydrolase of X-linked nucleoside diphosphate N terminal
PCGDLBEE_00958 3.1e-92 yidC U Membrane protein insertase, YidC Oxa1 family
PCGDLBEE_00959 1.4e-41 2.6.1.76 EGP Major Facilitator Superfamily
PCGDLBEE_00960 6.3e-20 G Major facilitator Superfamily
PCGDLBEE_00961 2.3e-295 mmuP E amino acid
PCGDLBEE_00963 1.9e-64 yeaO K Protein of unknown function, DUF488
PCGDLBEE_00964 2.7e-73
PCGDLBEE_00965 6.5e-158 3.6.4.12
PCGDLBEE_00966 1.1e-91 yijF S Domain of unknown function (DUF1287)
PCGDLBEE_00967 5.4e-297 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PCGDLBEE_00968 1.5e-70 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PCGDLBEE_00969 3.9e-139 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PCGDLBEE_00970 7.9e-16 3.5.1.124 S DJ-1/PfpI family
PCGDLBEE_00971 1.2e-52 3.5.1.124 S DJ-1/PfpI family
PCGDLBEE_00972 5.1e-223 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PCGDLBEE_00973 2.4e-173 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
PCGDLBEE_00974 2.6e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PCGDLBEE_00975 6.3e-134 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PCGDLBEE_00976 8.5e-143 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PCGDLBEE_00977 4.1e-142 rpsB J Belongs to the universal ribosomal protein uS2 family
PCGDLBEE_00978 1.7e-87 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PCGDLBEE_00979 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
PCGDLBEE_00980 3.3e-91
PCGDLBEE_00981 3.8e-207 guaB 1.1.1.205 F IMP dehydrogenase family protein
PCGDLBEE_00982 6.7e-242 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
PCGDLBEE_00983 2.3e-256 G ABC transporter substrate-binding protein
PCGDLBEE_00984 1.8e-86 M Peptidase family M23
PCGDLBEE_00985 2.9e-84 L Phage integrase family
PCGDLBEE_00986 1.4e-69 L Phage integrase family
PCGDLBEE_00988 1.3e-224
PCGDLBEE_00989 3.8e-184 pstIR 2.1.1.72, 3.1.21.4 L BsuBI/PstI restriction endonuclease C-terminus
PCGDLBEE_00990 1.4e-267 hsdBM 2.1.1.72 L Eco57I restriction-modification methylase
PCGDLBEE_00991 0.0 L Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PCGDLBEE_00992 6.6e-206 dcm 2.1.1.37 H Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
PCGDLBEE_00993 0.0 topB 5.99.1.2 L DNA topoisomerase
PCGDLBEE_00995 2.3e-24 xerH L Phage integrase family
PCGDLBEE_00996 8.1e-39 M Bacterial capsule synthesis protein PGA_cap
PCGDLBEE_00997 1.7e-15 M Bacterial capsule synthesis protein PGA_cap
PCGDLBEE_00998 5e-182 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PCGDLBEE_00999 1.1e-110 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
PCGDLBEE_01000 8.4e-117
PCGDLBEE_01001 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
PCGDLBEE_01002 3.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PCGDLBEE_01003 3.7e-82 rpsI J Belongs to the universal ribosomal protein uS9 family
PCGDLBEE_01004 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
PCGDLBEE_01005 2.3e-179 tdh 1.1.1.14 C Zinc-binding dehydrogenase
PCGDLBEE_01006 2.2e-233 EGP Major facilitator Superfamily
PCGDLBEE_01007 6e-75 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PCGDLBEE_01008 1.6e-213 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
PCGDLBEE_01009 2.7e-196 EGP Major facilitator Superfamily
PCGDLBEE_01010 2.2e-193 Z012_01000 1.1.1.14, 1.1.1.9 C Zinc-binding dehydrogenase
PCGDLBEE_01011 3.1e-170 rhaR_1 K helix_turn_helix, arabinose operon control protein
PCGDLBEE_01012 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PCGDLBEE_01013 4.3e-145 ywiC S YwiC-like protein
PCGDLBEE_01014 8.2e-137 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
PCGDLBEE_01015 8e-51 rpsJ J Involved in the binding of tRNA to the ribosomes
PCGDLBEE_01016 8.7e-116 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PCGDLBEE_01017 3.1e-116 rplD J Forms part of the polypeptide exit tunnel
PCGDLBEE_01018 7.5e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PCGDLBEE_01019 1.8e-153 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PCGDLBEE_01020 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PCGDLBEE_01021 5.7e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PCGDLBEE_01022 1.7e-100 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PCGDLBEE_01023 2.2e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PCGDLBEE_01024 4.1e-37 rpmC J Belongs to the universal ribosomal protein uL29 family
PCGDLBEE_01025 6.4e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PCGDLBEE_01026 6.6e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PCGDLBEE_01027 1.3e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PCGDLBEE_01028 7.5e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PCGDLBEE_01029 9.2e-18 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PCGDLBEE_01030 5.5e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PCGDLBEE_01031 1.6e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PCGDLBEE_01032 2.4e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PCGDLBEE_01033 6.7e-96 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PCGDLBEE_01034 9.2e-26 rpmD J Ribosomal protein L30p/L7e
PCGDLBEE_01035 8.1e-76 rplO J binds to the 23S rRNA
PCGDLBEE_01036 1.4e-245 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PCGDLBEE_01037 1.1e-98 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PCGDLBEE_01038 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PCGDLBEE_01039 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PCGDLBEE_01040 9.5e-62 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PCGDLBEE_01041 1.5e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PCGDLBEE_01042 3.4e-183 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PCGDLBEE_01043 1.6e-62 rplQ J Ribosomal protein L17
PCGDLBEE_01044 5.5e-22 S Psort location CytoplasmicMembrane, score
PCGDLBEE_01045 5.3e-96 rpoE4 K Sigma-70 region 2
PCGDLBEE_01046 8.1e-116 V VanZ like family
PCGDLBEE_01048 5.4e-107 V Psort location Cytoplasmic, score
PCGDLBEE_01049 4.9e-164 spaB S Thiopeptide-type bacteriocin biosynthesis domain protein
PCGDLBEE_01051 2.7e-308 V ABC transporter transmembrane region
PCGDLBEE_01052 3.2e-35 E Asparagine synthase
PCGDLBEE_01053 4.1e-292 E Asparagine synthase
PCGDLBEE_01054 1.4e-17
PCGDLBEE_01055 1.9e-121 V ABC transporter
PCGDLBEE_01056 1.9e-124 K helix_turn_helix, Lux Regulon
PCGDLBEE_01057 1.6e-233 T Histidine kinase
PCGDLBEE_01058 1.1e-107 S Domain of unknown function (DUF4192)
PCGDLBEE_01059 1.4e-265 K ParB-like nuclease domain
PCGDLBEE_01060 1.3e-46
PCGDLBEE_01061 1.1e-84
PCGDLBEE_01062 3.5e-70 S Bacterial mobilisation protein (MobC)
PCGDLBEE_01063 1.6e-271 rlx U Relaxase/Mobilisation nuclease domain
PCGDLBEE_01064 1.5e-161 S Protein of unknown function (DUF3801)
PCGDLBEE_01065 7.1e-165
PCGDLBEE_01066 9.4e-259 ard S Antirestriction protein (ArdA)
PCGDLBEE_01067 9.9e-124
PCGDLBEE_01068 3.5e-46
PCGDLBEE_01069 6.6e-59
PCGDLBEE_01070 0.0 U Type IV secretory system Conjugative DNA transfer
PCGDLBEE_01071 1.5e-99 S Putative amidase domain
PCGDLBEE_01072 3.4e-65 S Putative amidase domain
PCGDLBEE_01074 2e-185
PCGDLBEE_01075 1e-258 isp2 3.2.1.96 M CHAP domain
PCGDLBEE_01076 0.0 trsE U type IV secretory pathway VirB4
PCGDLBEE_01077 1.1e-65 S PrgI family protein
PCGDLBEE_01078 4.1e-142
PCGDLBEE_01079 8.1e-31
PCGDLBEE_01080 5.7e-51 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
PCGDLBEE_01082 4.4e-238 patB 4.4.1.8 E Aminotransferase, class I II
PCGDLBEE_01083 7.4e-221 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
PCGDLBEE_01084 8.9e-167 fmt2 3.2.2.10 S Belongs to the LOG family
PCGDLBEE_01085 2.1e-112 safC S O-methyltransferase
PCGDLBEE_01086 2.7e-182 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
PCGDLBEE_01087 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
PCGDLBEE_01088 0.0 dprA 5.99.1.2 LU DNA recombination-mediator protein A
PCGDLBEE_01089 9.8e-291 comM O Magnesium chelatase, subunit ChlI C-terminal
PCGDLBEE_01090 8.3e-75 yraN L Belongs to the UPF0102 family
PCGDLBEE_01091 4.7e-23 L Transposase and inactivated derivatives IS30 family
PCGDLBEE_01092 2.8e-165 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PCGDLBEE_01093 4.5e-252 metY 2.5.1.49 E Aminotransferase class-V
PCGDLBEE_01094 1.7e-168 V ABC transporter, ATP-binding protein
PCGDLBEE_01095 0.0 MV MacB-like periplasmic core domain
PCGDLBEE_01096 1.1e-139 K helix_turn_helix, Lux Regulon
PCGDLBEE_01097 0.0 tcsS2 T Histidine kinase
PCGDLBEE_01098 1.2e-288 pip 3.4.11.5 S alpha/beta hydrolase fold
PCGDLBEE_01099 1.4e-147 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PCGDLBEE_01100 4.8e-154 cjaA ET Bacterial periplasmic substrate-binding proteins
PCGDLBEE_01101 1.2e-138 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
PCGDLBEE_01102 1.2e-118 E Binding-protein-dependent transport system inner membrane component
PCGDLBEE_01103 7.4e-110 papP E Binding-protein-dependent transport system inner membrane component
PCGDLBEE_01104 1.3e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PCGDLBEE_01105 6.9e-242 S HipA-like C-terminal domain
PCGDLBEE_01106 5.4e-17 K addiction module antidote protein HigA
PCGDLBEE_01107 3.5e-217 G Transmembrane secretion effector
PCGDLBEE_01108 1.6e-118 K Bacterial regulatory proteins, tetR family
PCGDLBEE_01109 1e-11
PCGDLBEE_01110 1e-42 cysB 4.2.1.22 EGP Major facilitator Superfamily
PCGDLBEE_01111 1.3e-25 cysB 4.2.1.22 EGP Major facilitator Superfamily
PCGDLBEE_01112 3.2e-253 S UPF0210 protein
PCGDLBEE_01113 6.4e-44 gcvR T Belongs to the UPF0237 family
PCGDLBEE_01114 1.4e-15 lmrB EGP Major facilitator Superfamily
PCGDLBEE_01115 1.3e-232 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
PCGDLBEE_01116 6.6e-253 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
PCGDLBEE_01117 6.3e-123 glpR K DeoR C terminal sensor domain
PCGDLBEE_01118 1.8e-228 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
PCGDLBEE_01119 1.8e-229 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
PCGDLBEE_01120 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
PCGDLBEE_01121 1.4e-130 glxR K helix_turn_helix, cAMP Regulatory protein
PCGDLBEE_01122 4e-212 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
PCGDLBEE_01123 2.7e-191 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PCGDLBEE_01124 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
PCGDLBEE_01125 1.6e-224 S Uncharacterized conserved protein (DUF2183)
PCGDLBEE_01126 1.7e-69 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
PCGDLBEE_01127 1.3e-211 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
PCGDLBEE_01128 1.3e-159 mhpC I Alpha/beta hydrolase family
PCGDLBEE_01129 9.3e-121 F Domain of unknown function (DUF4916)
PCGDLBEE_01130 3.3e-59 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
PCGDLBEE_01131 5e-171 S G5
PCGDLBEE_01132 5.1e-129
PCGDLBEE_01133 7.6e-237 wcoI DM Psort location CytoplasmicMembrane, score
PCGDLBEE_01134 1.1e-69
PCGDLBEE_01135 1.2e-247 S Psort location CytoplasmicMembrane, score 9.99
PCGDLBEE_01136 1.8e-16 L Helix-turn-helix domain
PCGDLBEE_01137 6.4e-31 L PFAM Integrase catalytic
PCGDLBEE_01140 1.8e-36 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PCGDLBEE_01141 4.2e-197 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PCGDLBEE_01142 2.1e-131 cas4 3.1.12.1 L Domain of unknown function DUF83
PCGDLBEE_01143 8.7e-156 csd2 L CRISPR-associated protein Cas7
PCGDLBEE_01144 0.0 csd1 3.5.1.28 M CRISPR-associated protein (Cas_Csd1)
PCGDLBEE_01145 1.5e-137 cas5d S CRISPR-associated protein (Cas_Cas5)
PCGDLBEE_01146 0.0 cas3 L DEAD-like helicases superfamily
PCGDLBEE_01147 6.3e-61 L Transposase
PCGDLBEE_01148 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PCGDLBEE_01149 1.1e-135 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PCGDLBEE_01150 3.9e-169 EGP Major Facilitator Superfamily
PCGDLBEE_01151 6.8e-139 rihA_2 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PCGDLBEE_01152 2.7e-135 rbsR K helix_turn _helix lactose operon repressor
PCGDLBEE_01153 0.0 V ABC transporter transmembrane region
PCGDLBEE_01154 0.0 V ABC transporter, ATP-binding protein
PCGDLBEE_01155 8.9e-90 K MarR family
PCGDLBEE_01156 2.1e-185 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
PCGDLBEE_01157 1.3e-187 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PCGDLBEE_01158 4.5e-155 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PCGDLBEE_01159 1.2e-238 3.2.1.185 GH127 S Beta-L-arabinofuranosidase, GH127
PCGDLBEE_01160 3.5e-71 K Periplasmic binding protein domain
PCGDLBEE_01161 0.0 ubiB S ABC1 family
PCGDLBEE_01162 5.5e-38 S granule-associated protein
PCGDLBEE_01163 3.5e-140 cobQ S CobB/CobQ-like glutamine amidotransferase domain
PCGDLBEE_01164 1e-257 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
PCGDLBEE_01165 3.1e-255 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PCGDLBEE_01166 1.3e-238 dinF V MatE
PCGDLBEE_01167 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
PCGDLBEE_01168 1e-54 glnB K Nitrogen regulatory protein P-II
PCGDLBEE_01169 1e-227 amt U Ammonium Transporter Family
PCGDLBEE_01170 2.2e-171 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PCGDLBEE_01171 1.4e-150 icaR K Bacterial regulatory proteins, tetR family
PCGDLBEE_01172 2.8e-196 XK27_01805 M Glycosyltransferase like family 2
PCGDLBEE_01173 5.1e-300 pepD E Peptidase family C69
PCGDLBEE_01175 3.4e-290 3.5.2.6 V Beta-lactamase enzyme family
PCGDLBEE_01176 5e-303 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PCGDLBEE_01177 1.4e-192 opcA G Glucose-6-phosphate dehydrogenase subunit
PCGDLBEE_01178 8.1e-138 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
PCGDLBEE_01179 2.1e-151 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
PCGDLBEE_01180 4.8e-45
PCGDLBEE_01181 1.1e-116 lacS G Psort location CytoplasmicMembrane, score 10.00
PCGDLBEE_01183 2e-120 V ATPases associated with a variety of cellular activities
PCGDLBEE_01184 2.2e-99
PCGDLBEE_01185 6.8e-81
PCGDLBEE_01186 3.2e-29 spaB S Lantibiotic dehydratase, C terminus
PCGDLBEE_01187 4.1e-18 V Lanthionine synthetase C-like protein
PCGDLBEE_01188 9.6e-41 V ATPase activity
PCGDLBEE_01189 4.9e-47 V ABC-2 type transporter
PCGDLBEE_01190 0.0 sprF 4.6.1.1 M Cell surface antigen C-terminus
PCGDLBEE_01192 7.8e-126 K Helix-turn-helix domain protein
PCGDLBEE_01193 5.2e-27
PCGDLBEE_01194 9.2e-71
PCGDLBEE_01195 1.7e-35
PCGDLBEE_01196 2.1e-103 parA D AAA domain
PCGDLBEE_01197 8e-83 S Transcription factor WhiB
PCGDLBEE_01198 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PCGDLBEE_01199 1e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PCGDLBEE_01200 1.6e-107
PCGDLBEE_01201 5.5e-86
PCGDLBEE_01203 2.1e-277 M LPXTG cell wall anchor motif
PCGDLBEE_01204 0.0 1.3.98.1, 3.2.1.21 GH3 M Conserved repeat domain
PCGDLBEE_01205 1.1e-97
PCGDLBEE_01206 4.9e-11
PCGDLBEE_01208 2.8e-112 P Sodium/hydrogen exchanger family
PCGDLBEE_01209 9.2e-72 ams 2.4.1.4, 3.2.1.1, 5.4.99.16 GH13 G Alpha amylase, catalytic domain
PCGDLBEE_01210 1.9e-81 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PCGDLBEE_01211 1.4e-89 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PCGDLBEE_01212 4.7e-257 MA20_36090 S Psort location Cytoplasmic, score 8.87
PCGDLBEE_01213 1.9e-105 K Bacterial regulatory proteins, tetR family
PCGDLBEE_01214 3.8e-12 L Transposase DDE domain
PCGDLBEE_01215 2.1e-29 L Transposase DDE domain
PCGDLBEE_01216 3.1e-204 EGP Major Facilitator Superfamily
PCGDLBEE_01217 2.6e-230 S AAA domain
PCGDLBEE_01218 1.1e-87 mtnE 2.6.1.83 E Aminotransferase class I and II
PCGDLBEE_01219 2.2e-218 M Glycosyl transferase 4-like domain
PCGDLBEE_01220 2.3e-195 ltaE 4.1.2.48 E Beta-eliminating lyase
PCGDLBEE_01222 6.6e-111 yocS S SBF-like CPA transporter family (DUF4137)
PCGDLBEE_01223 9.3e-62 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PCGDLBEE_01224 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PCGDLBEE_01225 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PCGDLBEE_01226 6.2e-232 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PCGDLBEE_01227 1e-128 tmp1 S Domain of unknown function (DUF4391)
PCGDLBEE_01228 3e-145 rlrG K Bacterial regulatory helix-turn-helix protein, lysR family
PCGDLBEE_01229 1e-185 MA20_14895 S Conserved hypothetical protein 698
PCGDLBEE_01231 2.9e-30 S Psort location CytoplasmicMembrane, score
PCGDLBEE_01232 7.3e-59 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PCGDLBEE_01233 8.4e-88 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PCGDLBEE_01234 1.8e-75 K MerR family regulatory protein
PCGDLBEE_01235 1.1e-197 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
PCGDLBEE_01236 1.1e-253 S Domain of unknown function (DUF4143)
PCGDLBEE_01237 7.9e-35
PCGDLBEE_01238 2.7e-77 KT Transcriptional regulatory protein, C terminal
PCGDLBEE_01239 7.1e-174 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
PCGDLBEE_01240 4.2e-147 E GDSL-like Lipase/Acylhydrolase family
PCGDLBEE_01241 1.1e-237 bglA 3.2.1.21 G Glycosyl hydrolase family 1
PCGDLBEE_01242 1.7e-299 E Bacterial extracellular solute-binding proteins, family 5 Middle
PCGDLBEE_01243 1.3e-174 EP Binding-protein-dependent transport system inner membrane component
PCGDLBEE_01244 5.3e-155 EP Binding-protein-dependent transport system inner membrane component
PCGDLBEE_01245 5e-141 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
PCGDLBEE_01246 2.7e-138 dppF E ABC transporter
PCGDLBEE_01247 0.0 3.2.1.25 G beta-mannosidase
PCGDLBEE_01248 9.2e-144 K helix_turn _helix lactose operon repressor
PCGDLBEE_01250 9.9e-217 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
PCGDLBEE_01251 7.3e-156 K LysR substrate binding domain
PCGDLBEE_01252 9.5e-216 EGP Major Facilitator Superfamily
PCGDLBEE_01253 3.8e-138 K LysR substrate binding domain
PCGDLBEE_01254 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
PCGDLBEE_01255 5.7e-242 vbsD V MatE
PCGDLBEE_01256 5.1e-122 magIII L endonuclease III
PCGDLBEE_01258 5.7e-110 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PCGDLBEE_01259 2.4e-40 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PCGDLBEE_01260 1.6e-183 S Membrane transport protein
PCGDLBEE_01261 7.4e-48 4.1.1.44 L Cupin 2, conserved barrel domain protein
PCGDLBEE_01263 0.0 M probably involved in cell wall
PCGDLBEE_01264 9.1e-253 3.2.1.14 GH18 S Carbohydrate binding domain
PCGDLBEE_01265 0.0 T Diguanylate cyclase, GGDEF domain
PCGDLBEE_01266 7.1e-136 ybbM V Uncharacterised protein family (UPF0014)
PCGDLBEE_01267 1.4e-127 ybbL V ATPases associated with a variety of cellular activities
PCGDLBEE_01268 3.9e-104 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PCGDLBEE_01269 1.5e-92 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PCGDLBEE_01270 2.2e-240 carA 6.3.5.5 F Belongs to the CarA family
PCGDLBEE_01271 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
PCGDLBEE_01272 5.7e-169 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PCGDLBEE_01273 2.4e-104 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PCGDLBEE_01274 3.7e-136 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
PCGDLBEE_01276 0.0 tetP J Elongation factor G, domain IV
PCGDLBEE_01277 7.9e-126 ypfH S Phospholipase/Carboxylesterase
PCGDLBEE_01278 2.6e-233 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PCGDLBEE_01279 1.2e-41 XAC3035 O Glutaredoxin
PCGDLBEE_01280 2.7e-08 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
PCGDLBEE_01281 7.2e-116 XK27_08050 O prohibitin homologues
PCGDLBEE_01282 5.1e-59 S Domain of unknown function (DUF4143)
PCGDLBEE_01283 2.9e-159 S Patatin-like phospholipase
PCGDLBEE_01284 5.7e-149 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PCGDLBEE_01285 6e-171 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
PCGDLBEE_01286 3.8e-128 S Vitamin K epoxide reductase
PCGDLBEE_01287 1.5e-169 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
PCGDLBEE_01288 4.7e-32 S Protein of unknown function (DUF3107)
PCGDLBEE_01289 5.5e-300 mphA S Aminoglycoside phosphotransferase
PCGDLBEE_01290 3.8e-290 uvrD2 3.6.4.12 L DNA helicase
PCGDLBEE_01291 3.1e-293 S Zincin-like metallopeptidase
PCGDLBEE_01292 1.7e-157 lon T Belongs to the peptidase S16 family
PCGDLBEE_01293 1.6e-73 S Protein of unknown function (DUF3052)
PCGDLBEE_01295 1e-205 2.7.11.1 NU Tfp pilus assembly protein FimV
PCGDLBEE_01296 1.7e-221 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PCGDLBEE_01297 5.3e-231 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PCGDLBEE_01298 0.0 I acetylesterase activity
PCGDLBEE_01299 8.5e-128 recO L Involved in DNA repair and RecF pathway recombination
PCGDLBEE_01300 3.1e-155 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PCGDLBEE_01301 3.8e-134 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
PCGDLBEE_01302 1.5e-189 P NMT1/THI5 like
PCGDLBEE_01303 1.4e-223 E Aminotransferase class I and II
PCGDLBEE_01304 3.7e-140 bioM P ATPases associated with a variety of cellular activities
PCGDLBEE_01305 1e-18 2.8.2.22 S Arylsulfotransferase Ig-like domain
PCGDLBEE_01306 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PCGDLBEE_01307 0.0 S Tetratricopeptide repeat
PCGDLBEE_01308 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PCGDLBEE_01309 8.1e-202 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PCGDLBEE_01310 2.3e-281 glnA 6.3.1.2 E glutamine synthetase
PCGDLBEE_01311 8.6e-142 S Domain of unknown function (DUF4191)
PCGDLBEE_01312 7.6e-272 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PCGDLBEE_01313 2e-101 S Protein of unknown function (DUF3043)
PCGDLBEE_01314 4.4e-258 argE E Peptidase dimerisation domain
PCGDLBEE_01315 1.8e-107 ykoE S ABC-type cobalt transport system, permease component
PCGDLBEE_01316 7e-278 ykoD P ATPases associated with a variety of cellular activities
PCGDLBEE_01317 1.8e-162 cbiQ P Cobalt transport protein
PCGDLBEE_01318 7.9e-160 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PCGDLBEE_01319 5e-201 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PCGDLBEE_01320 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
PCGDLBEE_01321 4.8e-93
PCGDLBEE_01322 3e-201 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PCGDLBEE_01323 2.6e-211 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PCGDLBEE_01324 8.2e-179 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
PCGDLBEE_01325 1.3e-248 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
PCGDLBEE_01326 3.9e-184 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PCGDLBEE_01327 5.9e-83 argR K Regulates arginine biosynthesis genes
PCGDLBEE_01328 1.2e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PCGDLBEE_01329 3e-281 argH 4.3.2.1 E argininosuccinate lyase
PCGDLBEE_01330 7.9e-28 thiS 2.8.1.10 H ThiS family
PCGDLBEE_01331 1.8e-156 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PCGDLBEE_01332 5e-145 moeB 2.7.7.80 H ThiF family
PCGDLBEE_01333 3.3e-64 M1-798 P Rhodanese Homology Domain
PCGDLBEE_01334 4.6e-102 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
PCGDLBEE_01335 3.9e-139 S Putative ABC-transporter type IV
PCGDLBEE_01336 9.1e-82 S Protein of unknown function (DUF975)
PCGDLBEE_01337 2.6e-255 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PCGDLBEE_01338 3.6e-18 L Tetratricopeptide repeat
PCGDLBEE_01340 5.6e-158 S Sucrose-6F-phosphate phosphohydrolase
PCGDLBEE_01341 5.1e-176 metQ P NLPA lipoprotein
PCGDLBEE_01342 1.4e-220 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PCGDLBEE_01343 7.4e-113 metI P Binding-protein-dependent transport system inner membrane component
PCGDLBEE_01344 4.1e-225 S Peptidase dimerisation domain
PCGDLBEE_01345 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PCGDLBEE_01346 1e-37
PCGDLBEE_01347 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
PCGDLBEE_01348 8.7e-175 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PCGDLBEE_01349 1.4e-118 S Protein of unknown function (DUF3000)
PCGDLBEE_01350 3.4e-252 rnd 3.1.13.5 J 3'-5' exonuclease
PCGDLBEE_01351 4.4e-234 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PCGDLBEE_01352 2.4e-243 clcA_2 P Voltage gated chloride channel
PCGDLBEE_01353 3.4e-59
PCGDLBEE_01354 6.5e-116 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PCGDLBEE_01355 7.3e-121 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PCGDLBEE_01356 1.3e-249 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PCGDLBEE_01357 1.6e-65 L Helix-turn-helix domain
PCGDLBEE_01358 6.9e-14 L PFAM Integrase catalytic
PCGDLBEE_01359 7.9e-87
PCGDLBEE_01360 8.8e-67
PCGDLBEE_01361 5.6e-48 L Transposase, Mutator family
PCGDLBEE_01362 1.3e-89 L Transposase
PCGDLBEE_01363 1.5e-43 L Psort location Cytoplasmic, score
PCGDLBEE_01364 2.4e-103 K Transposase IS116 IS110 IS902
PCGDLBEE_01365 4.5e-66 L PFAM Integrase catalytic
PCGDLBEE_01366 5.2e-211 L PFAM Integrase catalytic
PCGDLBEE_01367 1.4e-131 L IstB-like ATP binding protein
PCGDLBEE_01368 2.1e-24 L PFAM Integrase catalytic
PCGDLBEE_01369 1.4e-49 L Transposase
PCGDLBEE_01370 9.3e-176 5.1.3.37 P Domain of unknown function (DUF4143)
PCGDLBEE_01371 1.7e-59 L IstB-like ATP binding protein
PCGDLBEE_01372 4.9e-70 L IstB-like ATP binding protein
PCGDLBEE_01373 5.9e-53 L Helix-turn-helix domain
PCGDLBEE_01374 4.6e-106 S Sulfite exporter TauE/SafE
PCGDLBEE_01375 1.2e-271 aslB C Iron-sulfur cluster-binding domain
PCGDLBEE_01376 2.1e-311 P Domain of unknown function (DUF4976)
PCGDLBEE_01377 1.4e-251 gtr U Sugar (and other) transporter
PCGDLBEE_01378 2.4e-158 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
PCGDLBEE_01379 5.5e-217 GK ROK family
PCGDLBEE_01380 3.1e-173 2.7.1.2 GK ROK family
PCGDLBEE_01381 1.2e-146 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PCGDLBEE_01382 2.8e-243 nagA 3.5.1.25 G Amidohydrolase family
PCGDLBEE_01383 1.1e-251 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PCGDLBEE_01384 2.4e-20 EGP Transmembrane secretion effector
PCGDLBEE_01386 9.1e-107 pepE 3.4.13.21 E Belongs to the peptidase S51 family
PCGDLBEE_01387 4.6e-70 S Putative DNA-binding domain
PCGDLBEE_01388 5.2e-28
PCGDLBEE_01390 3.7e-16
PCGDLBEE_01391 1.1e-300 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PCGDLBEE_01392 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
PCGDLBEE_01393 3e-262 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PCGDLBEE_01394 6.5e-66 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PCGDLBEE_01395 2.7e-134 3.1.3.85 G Phosphoglycerate mutase family
PCGDLBEE_01396 1e-87 L IstB-like ATP binding protein
PCGDLBEE_01397 1.6e-32 L Psort location Cytoplasmic, score 8.87
PCGDLBEE_01398 2.2e-19 cps1D M Domain of unknown function (DUF4422)
PCGDLBEE_01399 9.2e-26 cps1D M Domain of unknown function (DUF4422)
PCGDLBEE_01400 8.6e-155 S Glycosyl transferase family 2
PCGDLBEE_01401 2.4e-27 S Psort location CytoplasmicMembrane, score 9.99
PCGDLBEE_01402 4.2e-222 S Psort location CytoplasmicMembrane, score 9.99
PCGDLBEE_01403 6.1e-175 wbbI M transferase activity, transferring glycosyl groups
PCGDLBEE_01404 2.8e-148 1.13.11.79 C Psort location Cytoplasmic, score 8.87
PCGDLBEE_01405 2.2e-132 GT2 M Glycosyltransferase like family 2
PCGDLBEE_01406 1.1e-180 C Polysaccharide pyruvyl transferase
PCGDLBEE_01407 4.1e-18 L Helix-turn-helix domain
PCGDLBEE_01408 3.3e-68 trxB1 1.8.1.9 C Thioredoxin domain
PCGDLBEE_01409 3.1e-22 trxB1 1.8.1.9 C Thioredoxin domain
PCGDLBEE_01410 3.4e-191 oppA5 E family 5
PCGDLBEE_01411 4.7e-121 appB P PFAM binding-protein-dependent transport systems inner membrane component
PCGDLBEE_01412 2.1e-88 appC EP PFAM binding-protein-dependent transport systems inner membrane component
PCGDLBEE_01413 7e-153 P Belongs to the ABC transporter superfamily
PCGDLBEE_01414 4.8e-80 ybfG M Domain of unknown function (DUF1906)
PCGDLBEE_01416 3.3e-38 K Addiction module
PCGDLBEE_01417 2.2e-51 S Phage derived protein Gp49-like (DUF891)
PCGDLBEE_01418 2.5e-218 L Transposase, Mutator family
PCGDLBEE_01419 2.4e-50 L Transposase and inactivated derivatives IS30 family
PCGDLBEE_01420 2.6e-194 K Psort location Cytoplasmic, score
PCGDLBEE_01421 4.2e-144 traX S TraX protein
PCGDLBEE_01422 3.1e-173 S HAD-hyrolase-like
PCGDLBEE_01423 0.0 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
PCGDLBEE_01424 2.6e-161 malG G Binding-protein-dependent transport system inner membrane component
PCGDLBEE_01425 2.4e-251 malF G Binding-protein-dependent transport system inner membrane component
PCGDLBEE_01426 1.3e-232 malE G Bacterial extracellular solute-binding protein
PCGDLBEE_01427 3.2e-166 malL 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
PCGDLBEE_01428 2.5e-56
PCGDLBEE_01429 2.2e-20
PCGDLBEE_01430 3.5e-32
PCGDLBEE_01432 4.8e-39 S AAA domain, putative AbiEii toxin, Type IV TA system
PCGDLBEE_01433 1.1e-30 S AAA domain, putative AbiEii toxin, Type IV TA system
PCGDLBEE_01434 4.7e-103 insK L Integrase core domain
PCGDLBEE_01435 2.9e-15 S COG NOG14600 non supervised orthologous group
PCGDLBEE_01436 9.2e-10
PCGDLBEE_01437 3.6e-225 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PCGDLBEE_01438 3.6e-137 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PCGDLBEE_01439 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
PCGDLBEE_01440 8.2e-222 I alpha/beta hydrolase fold
PCGDLBEE_01441 2.8e-252 Q D-alanine [D-alanyl carrier protein] ligase activity
PCGDLBEE_01442 6.6e-111 Q D-alanine [D-alanyl carrier protein] ligase activity
PCGDLBEE_01443 1.1e-101 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
PCGDLBEE_01444 1.2e-13 C Aldo/keto reductase family
PCGDLBEE_01445 3.5e-32
PCGDLBEE_01446 1.2e-299 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
PCGDLBEE_01447 7.9e-293 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PCGDLBEE_01448 1.6e-183 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PCGDLBEE_01449 9.1e-242 purD 6.3.4.13 F Belongs to the GARS family
PCGDLBEE_01450 1.5e-294 aldH 1.2.1.3, 1.2.1.5 C Aldehyde dehydrogenase family
PCGDLBEE_01451 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
PCGDLBEE_01452 3.2e-143 P Zinc-uptake complex component A periplasmic
PCGDLBEE_01453 8.9e-69 zur P Belongs to the Fur family
PCGDLBEE_01454 1.1e-222 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PCGDLBEE_01455 6.2e-85 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PCGDLBEE_01456 2.4e-181 adh3 C Zinc-binding dehydrogenase
PCGDLBEE_01457 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PCGDLBEE_01458 5.6e-278 macB_8 V MacB-like periplasmic core domain
PCGDLBEE_01459 8e-177 M Conserved repeat domain
PCGDLBEE_01460 4e-134 V ATPases associated with a variety of cellular activities
PCGDLBEE_01461 1.9e-86 msrA 1.8.4.11, 1.8.4.12 O peptide-methionine (S)-S-oxide reductase activity
PCGDLBEE_01462 0.0 E ABC transporter, substrate-binding protein, family 5
PCGDLBEE_01463 4.5e-13 L Psort location Cytoplasmic, score 8.87
PCGDLBEE_01464 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
PCGDLBEE_01465 9.9e-225 K helix_turn _helix lactose operon repressor
PCGDLBEE_01466 4.3e-258 G Bacterial extracellular solute-binding protein
PCGDLBEE_01469 3.1e-156 K Helix-turn-helix domain, rpiR family
PCGDLBEE_01470 3.5e-42 G Alpha-L-arabinofuranosidase C-terminal domain
PCGDLBEE_01471 3.3e-30
PCGDLBEE_01472 3.8e-210 ybiR P Citrate transporter
PCGDLBEE_01473 1.6e-293 EK Alanine-glyoxylate amino-transferase
PCGDLBEE_01474 1.1e-115 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
PCGDLBEE_01475 3.1e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
PCGDLBEE_01476 1e-34
PCGDLBEE_01477 1.8e-69 S PIN domain
PCGDLBEE_01478 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PCGDLBEE_01479 2.9e-243 dgt 3.1.5.1 F Phosphohydrolase-associated domain
PCGDLBEE_01480 2.9e-262 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PCGDLBEE_01481 4.3e-272 yhdG E aromatic amino acid transport protein AroP K03293
PCGDLBEE_01482 6.5e-104 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PCGDLBEE_01483 2.7e-93 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PCGDLBEE_01484 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PCGDLBEE_01485 3.5e-219 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PCGDLBEE_01486 1.8e-192 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
PCGDLBEE_01487 2.4e-136 sapF E ATPases associated with a variety of cellular activities
PCGDLBEE_01488 5.5e-136 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
PCGDLBEE_01489 1.1e-146 EP Binding-protein-dependent transport system inner membrane component
PCGDLBEE_01490 7.4e-167 P Binding-protein-dependent transport system inner membrane component
PCGDLBEE_01491 1.9e-292 E ABC transporter, substrate-binding protein, family 5
PCGDLBEE_01492 4.5e-143 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PCGDLBEE_01493 4e-278 G Bacterial extracellular solute-binding protein
PCGDLBEE_01494 1.7e-259 G Bacterial extracellular solute-binding protein
PCGDLBEE_01495 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PCGDLBEE_01496 1.2e-167 G ABC transporter permease
PCGDLBEE_01497 1.4e-167 malC G Binding-protein-dependent transport system inner membrane component
PCGDLBEE_01498 4.8e-182 K Periplasmic binding protein domain
PCGDLBEE_01499 1.5e-140 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
PCGDLBEE_01500 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PCGDLBEE_01501 1.4e-150 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
PCGDLBEE_01502 8e-153 yecS E Binding-protein-dependent transport system inner membrane component
PCGDLBEE_01503 5.8e-169 pknD ET ABC transporter, substrate-binding protein, family 3
PCGDLBEE_01504 1.6e-142 pknD ET ABC transporter, substrate-binding protein, family 3
PCGDLBEE_01505 9.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PCGDLBEE_01506 3.2e-144 usp 3.5.1.28 CBM50 D CHAP domain protein
PCGDLBEE_01507 9.8e-161 ftsX D Part of the ABC transporter FtsEX involved in cellular division
PCGDLBEE_01508 4.8e-192 ftsE D Cell division ATP-binding protein FtsE
PCGDLBEE_01509 1e-204 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PCGDLBEE_01510 8.5e-268 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
PCGDLBEE_01511 1.1e-121 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PCGDLBEE_01512 8.9e-259 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PCGDLBEE_01513 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
PCGDLBEE_01514 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PCGDLBEE_01515 1.7e-165 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PCGDLBEE_01516 7.1e-133 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PCGDLBEE_01517 6.1e-233 G Major Facilitator Superfamily
PCGDLBEE_01518 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
PCGDLBEE_01519 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
PCGDLBEE_01520 1.2e-221 KLT Protein tyrosine kinase
PCGDLBEE_01521 0.0 S Fibronectin type 3 domain
PCGDLBEE_01522 1.1e-237 S Protein of unknown function DUF58
PCGDLBEE_01523 0.0 E Transglutaminase-like superfamily
PCGDLBEE_01524 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PCGDLBEE_01525 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PCGDLBEE_01526 5.3e-125
PCGDLBEE_01527 9.2e-186 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
PCGDLBEE_01528 7.6e-115 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PCGDLBEE_01529 4.8e-65 S Predicted membrane protein (DUF2142)
PCGDLBEE_01530 1.1e-172 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
PCGDLBEE_01532 1.7e-190 M Glycosyltransferase like family 2
PCGDLBEE_01533 2.2e-60 L PFAM Integrase catalytic
PCGDLBEE_01534 6.5e-111 pptA 6.3.2.14 Q 4'-phosphopantetheinyl transferase superfamily
PCGDLBEE_01535 1.9e-115 K WHG domain
PCGDLBEE_01537 5.5e-137 EGP Major Facilitator Superfamily
PCGDLBEE_01538 2.1e-118 EGP Major Facilitator Superfamily
PCGDLBEE_01539 1.9e-45 L Integrase core domain
PCGDLBEE_01540 9.8e-296 L PFAM Integrase catalytic
PCGDLBEE_01541 4.3e-171 G Acyltransferase family
PCGDLBEE_01542 1.1e-209 EGP Transmembrane secretion effector
PCGDLBEE_01543 8.6e-56 KLT Protein tyrosine kinase
PCGDLBEE_01544 3e-228 2.7.7.7 L Transposase and inactivated derivatives
PCGDLBEE_01545 6.8e-77 L Transposase and inactivated derivatives IS30 family
PCGDLBEE_01546 4.6e-67 L Integrase core domain
PCGDLBEE_01547 6.4e-142 cobB2 K Sir2 family
PCGDLBEE_01548 1.5e-231 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
PCGDLBEE_01549 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
PCGDLBEE_01550 2.9e-154 G Binding-protein-dependent transport system inner membrane component
PCGDLBEE_01551 4.7e-147 malC G Binding-protein-dependent transport system inner membrane component
PCGDLBEE_01552 3.8e-243 msmE7 G Bacterial extracellular solute-binding protein
PCGDLBEE_01553 3.8e-229 nagC GK ROK family
PCGDLBEE_01554 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
PCGDLBEE_01555 9.8e-79 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PCGDLBEE_01556 0.0 yjcE P Sodium/hydrogen exchanger family
PCGDLBEE_01557 4.7e-119 S membrane transporter protein
PCGDLBEE_01558 1.1e-146 ypfH S Phospholipase/Carboxylesterase
PCGDLBEE_01559 1.1e-150
PCGDLBEE_01560 1e-110 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
PCGDLBEE_01561 8.6e-25
PCGDLBEE_01562 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
PCGDLBEE_01563 7.7e-125 I alpha/beta hydrolase fold
PCGDLBEE_01564 7.4e-43
PCGDLBEE_01565 6.4e-174 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PCGDLBEE_01566 1.8e-164 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
PCGDLBEE_01567 4.2e-302 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PCGDLBEE_01568 2.3e-270 KLT Domain of unknown function (DUF4032)
PCGDLBEE_01569 4.2e-136
PCGDLBEE_01570 8.5e-179 3.4.22.70 M Sortase family
PCGDLBEE_01571 8.4e-261 M LPXTG-motif cell wall anchor domain protein
PCGDLBEE_01572 1.3e-287 S LPXTG-motif cell wall anchor domain protein
PCGDLBEE_01573 7.6e-18 tnp7109-21 L Integrase core domain
PCGDLBEE_01574 1.5e-131 K helix_turn _helix lactose operon repressor
PCGDLBEE_01575 4.2e-146 G Periplasmic binding protein domain
PCGDLBEE_01576 7.9e-179 3.6.3.17 G ATPases associated with a variety of cellular activities
PCGDLBEE_01577 3.8e-142 U Branched-chain amino acid transport system / permease component
PCGDLBEE_01578 2.2e-185
PCGDLBEE_01580 9.1e-26 tnp3514b L Winged helix-turn helix
PCGDLBEE_01581 1.5e-33 S LPXTG-motif cell wall anchor domain protein
PCGDLBEE_01582 4.3e-211 ugpC E Belongs to the ABC transporter superfamily
PCGDLBEE_01583 6e-137 K UTRA domain
PCGDLBEE_01584 4.9e-241 ulaA 2.7.1.194 S PTS system sugar-specific permease component
PCGDLBEE_01585 1.1e-44 ulaB 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
PCGDLBEE_01586 2.1e-73 2.7.1.194, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PCGDLBEE_01587 1.2e-216 2.4.1.166 GT2 M Glycosyltransferase like family 2
PCGDLBEE_01588 1.3e-190 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PCGDLBEE_01590 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PCGDLBEE_01591 6e-88 nrdI F Probably involved in ribonucleotide reductase function
PCGDLBEE_01592 2e-42 nrdH O Glutaredoxin
PCGDLBEE_01594 8.3e-122 S Psort location CytoplasmicMembrane, score
PCGDLBEE_01595 0.0 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
PCGDLBEE_01596 3.1e-121 K Helix-turn-helix XRE-family like proteins
PCGDLBEE_01597 3.8e-125 S Protein of unknown function (DUF3990)
PCGDLBEE_01598 7.7e-50 kcsA U Ion channel
PCGDLBEE_01599 0.0 3.2.1.21 GH3 G Fibronectin type III-like domain
PCGDLBEE_01600 1.7e-134 T GHKL domain
PCGDLBEE_01601 2.7e-118 T LytTr DNA-binding domain
PCGDLBEE_01602 3.9e-119 3.2.1.21 GH3 G Fibronectin type III-like domain
PCGDLBEE_01603 0.0 KLT Protein tyrosine kinase
PCGDLBEE_01604 2e-135 O Thioredoxin
PCGDLBEE_01606 4.8e-215 S G5
PCGDLBEE_01607 2.2e-168 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PCGDLBEE_01608 1.3e-173 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PCGDLBEE_01609 3.1e-110 S LytR cell envelope-related transcriptional attenuator
PCGDLBEE_01610 2.7e-282 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
PCGDLBEE_01611 2.3e-160 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
PCGDLBEE_01612 0.0
PCGDLBEE_01613 0.0 murJ KLT MviN-like protein
PCGDLBEE_01614 3.5e-175 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PCGDLBEE_01615 1e-221 parB K Belongs to the ParB family
PCGDLBEE_01616 8.1e-174 parA D CobQ CobB MinD ParA nucleotide binding domain protein
PCGDLBEE_01617 3.4e-123 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PCGDLBEE_01618 3e-93 jag S Putative single-stranded nucleic acids-binding domain
PCGDLBEE_01619 9.3e-181 yidC U Membrane protein insertase, YidC Oxa1 family
PCGDLBEE_01620 2.9e-57 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PCGDLBEE_01621 2.6e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PCGDLBEE_01622 3.3e-280 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PCGDLBEE_01623 5.5e-206 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PCGDLBEE_01624 1.1e-201 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PCGDLBEE_01625 4.2e-83 S Protein of unknown function (DUF721)
PCGDLBEE_01626 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PCGDLBEE_01627 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PCGDLBEE_01628 9.3e-50 S Transmembrane domain of unknown function (DUF3566)
PCGDLBEE_01629 4.5e-183 lacR K Transcriptional regulator, LacI family
PCGDLBEE_01630 1.4e-15 lacS G Psort location CytoplasmicMembrane, score 10.00
PCGDLBEE_01631 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PCGDLBEE_01632 5.2e-203 V VanZ like family
PCGDLBEE_01633 2.8e-257 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
PCGDLBEE_01634 5.3e-197 S Psort location CytoplasmicMembrane, score
PCGDLBEE_01635 7.4e-17 S Domain of unknown function (DUF4143)
PCGDLBEE_01638 9.3e-121 S Protein of unknown function DUF45
PCGDLBEE_01639 6.7e-256 S Domain of unknown function (DUF4143)
PCGDLBEE_01640 1.2e-82 dps P Belongs to the Dps family
PCGDLBEE_01641 5.7e-234 ytfL P Transporter associated domain
PCGDLBEE_01642 5.5e-206 S AAA ATPase domain
PCGDLBEE_01643 2.4e-119 cah 4.2.1.1 P Reversible hydration of carbon dioxide
PCGDLBEE_01644 2.9e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
PCGDLBEE_01645 0.0 trxB2 1.8.1.9 C Thioredoxin domain
PCGDLBEE_01646 2e-45 L IstB-like ATP binding protein
PCGDLBEE_01647 3.1e-22 L Psort location Cytoplasmic, score 8.87
PCGDLBEE_01649 4.9e-137 L Tetratricopeptide repeat
PCGDLBEE_01650 3.2e-200 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
PCGDLBEE_01652 5.5e-141 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PCGDLBEE_01653 1.4e-95
PCGDLBEE_01654 1.3e-49 trkA P TrkA-N domain
PCGDLBEE_01655 1.9e-41 trkB P Cation transport protein
PCGDLBEE_01656 9.6e-183 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PCGDLBEE_01657 0.0 recN L May be involved in recombinational repair of damaged DNA
PCGDLBEE_01658 5e-119 S Haloacid dehalogenase-like hydrolase
PCGDLBEE_01659 6e-13 J Acetyltransferase (GNAT) domain
PCGDLBEE_01660 2.3e-18 J Acetyltransferase (GNAT) domain
PCGDLBEE_01661 4.8e-58 K helix_turn_helix gluconate operon transcriptional repressor
PCGDLBEE_01662 1.1e-172 V ATPases associated with a variety of cellular activities
PCGDLBEE_01663 1.7e-120 S ABC-2 family transporter protein
PCGDLBEE_01664 3.7e-107
PCGDLBEE_01665 8.8e-25 pacL2 3.6.3.8 P ATPase, P-type transporting, HAD superfamily, subfamily IC
PCGDLBEE_01666 7.8e-71 K helix_turn_helix gluconate operon transcriptional repressor
PCGDLBEE_01667 3.1e-196 S Protein of unknown function (DUF1648)
PCGDLBEE_01668 8.6e-284 thrC 4.2.3.1 E Threonine synthase N terminus
PCGDLBEE_01669 2.9e-235 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PCGDLBEE_01670 3e-96
PCGDLBEE_01671 7.8e-137 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PCGDLBEE_01672 8e-130 S TIGRFAM TIGR03943 family protein
PCGDLBEE_01673 6.4e-167 ycgR S Predicted permease
PCGDLBEE_01675 1.8e-151 P Zinc-uptake complex component A periplasmic
PCGDLBEE_01676 8.6e-12 P Zinc-uptake complex component A periplasmic
PCGDLBEE_01677 0.0 S Uncharacterised protein family (UPF0182)
PCGDLBEE_01678 4.3e-90 2.3.1.183 M Acetyltransferase (GNAT) domain
PCGDLBEE_01679 7.6e-114 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PCGDLBEE_01680 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PCGDLBEE_01681 1e-178 1.1.1.65 C Aldo/keto reductase family
PCGDLBEE_01682 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PCGDLBEE_01683 1.6e-63 divIC D Septum formation initiator
PCGDLBEE_01684 6.3e-102 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
PCGDLBEE_01685 5.8e-183 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
PCGDLBEE_01687 2.6e-81 L HTH-like domain
PCGDLBEE_01688 2.8e-80 insK L Integrase core domain
PCGDLBEE_01689 9.2e-45 L Helix-turn-helix domain
PCGDLBEE_01690 2.4e-88 pin L Resolvase, N terminal domain
PCGDLBEE_01691 8.6e-211 G Bacterial extracellular solute-binding protein
PCGDLBEE_01692 3.3e-126 P Binding-protein-dependent transport system inner membrane component
PCGDLBEE_01693 4.4e-128 P Binding-protein-dependent transport systems inner membrane component
PCGDLBEE_01694 7.4e-258 M Protein of unknown function (DUF2961)
PCGDLBEE_01695 7.9e-237 bfrA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
PCGDLBEE_01696 3.8e-147 K helix_turn _helix lactose operon repressor
PCGDLBEE_01697 8.8e-49 L PFAM Integrase catalytic
PCGDLBEE_01698 3.9e-87 L PFAM Integrase catalytic
PCGDLBEE_01700 1.6e-121 XK27_00240 K Fic/DOC family
PCGDLBEE_01701 2.3e-07
PCGDLBEE_01702 1.1e-33
PCGDLBEE_01705 1.3e-07
PCGDLBEE_01708 2.6e-87 int8 L Phage integrase family
PCGDLBEE_01709 2.5e-40 int8 L Phage integrase family
PCGDLBEE_01710 3.2e-93
PCGDLBEE_01711 6.7e-281 sdaA 4.3.1.17 E Serine dehydratase alpha chain
PCGDLBEE_01712 1.4e-74 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
PCGDLBEE_01713 4.4e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PCGDLBEE_01714 5.9e-145 yplQ S Haemolysin-III related
PCGDLBEE_01715 7.5e-280 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PCGDLBEE_01716 4.9e-47 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
PCGDLBEE_01717 0.0 D FtsK/SpoIIIE family
PCGDLBEE_01718 2.1e-204 K Cell envelope-related transcriptional attenuator domain
PCGDLBEE_01719 1.8e-55 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
PCGDLBEE_01720 0.0 S Glycosyl transferase, family 2
PCGDLBEE_01721 1.1e-262
PCGDLBEE_01722 6.3e-78 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
PCGDLBEE_01723 2.2e-148 cof 5.2.1.8 T Eukaryotic phosphomannomutase
PCGDLBEE_01724 6.5e-122 ctsW S Phosphoribosyl transferase domain
PCGDLBEE_01725 9.8e-197 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PCGDLBEE_01726 1e-128 T Response regulator receiver domain protein
PCGDLBEE_01727 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PCGDLBEE_01728 2.1e-100 carD K CarD-like/TRCF domain
PCGDLBEE_01729 1.1e-87 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PCGDLBEE_01730 4.4e-136 znuB U ABC 3 transport family
PCGDLBEE_01731 1.9e-161 znuC P ATPases associated with a variety of cellular activities
PCGDLBEE_01732 3e-183 P Zinc-uptake complex component A periplasmic
PCGDLBEE_01733 1.1e-161 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PCGDLBEE_01734 1.2e-253 rpsA J Ribosomal protein S1
PCGDLBEE_01735 2.3e-105 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PCGDLBEE_01736 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PCGDLBEE_01737 2.1e-177 terC P Integral membrane protein, TerC family
PCGDLBEE_01738 2.7e-274 pyk 2.7.1.40 G Pyruvate kinase
PCGDLBEE_01739 9.1e-107 aspA 3.6.1.13 L NUDIX domain
PCGDLBEE_01741 1.2e-122 pdtaR T Response regulator receiver domain protein
PCGDLBEE_01742 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PCGDLBEE_01743 5.1e-178 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
PCGDLBEE_01744 4e-127 3.6.1.13 L NUDIX domain
PCGDLBEE_01745 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
PCGDLBEE_01746 1.3e-25 zntR K bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
PCGDLBEE_01747 6.9e-89 K Putative zinc ribbon domain
PCGDLBEE_01748 3.5e-120 S GyrI-like small molecule binding domain
PCGDLBEE_01750 6.2e-20 tag 3.2.2.20 L Methyladenine glycosylase
PCGDLBEE_01752 1.9e-214 ykiI
PCGDLBEE_01753 6.6e-251 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PCGDLBEE_01754 1.1e-231 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PCGDLBEE_01755 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PCGDLBEE_01757 3.2e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PCGDLBEE_01758 0.0 XK27_09800 I Psort location CytoplasmicMembrane, score 9.99
PCGDLBEE_01759 2.3e-176 V Abi-like protein
PCGDLBEE_01760 3.2e-27 yjdF S Protein of unknown function (DUF2992)
PCGDLBEE_01761 3.6e-137 sigH K Belongs to the sigma-70 factor family. ECF subfamily
PCGDLBEE_01762 5.6e-52
PCGDLBEE_01763 1.1e-186 galM 5.1.3.3 G Aldose 1-epimerase
PCGDLBEE_01764 2.1e-190 galM 5.1.3.3 G Aldose 1-epimerase
PCGDLBEE_01765 7.5e-183 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PCGDLBEE_01766 4.2e-89 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PCGDLBEE_01767 1.4e-195 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PCGDLBEE_01768 1.6e-134 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
PCGDLBEE_01769 1.1e-11 S Spermine/spermidine synthase domain
PCGDLBEE_01770 1.7e-113 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PCGDLBEE_01771 6.2e-25 rpmI J Ribosomal protein L35
PCGDLBEE_01772 2.1e-61 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PCGDLBEE_01773 1.5e-198 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PCGDLBEE_01774 7.6e-145 xerD D recombinase XerD
PCGDLBEE_01775 1.4e-149 soj D CobQ CobB MinD ParA nucleotide binding domain protein
PCGDLBEE_01776 2.4e-151 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PCGDLBEE_01777 4.4e-116 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PCGDLBEE_01778 1.8e-153 nrtR 3.6.1.55 F NUDIX hydrolase
PCGDLBEE_01779 7e-250 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PCGDLBEE_01780 2.8e-296 nadB 1.3.5.4, 1.4.3.16, 2.4.2.19 H Catalyzes the oxidation of L-aspartate to iminoaspartate
PCGDLBEE_01781 1.5e-161 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, N-terminal domain
PCGDLBEE_01782 8.1e-238 iscS1 2.8.1.7 E Aminotransferase class-V
PCGDLBEE_01783 4.5e-19 naiP U Sugar (and other) transporter
PCGDLBEE_01784 0.0 V FtsX-like permease family
PCGDLBEE_01785 1.1e-136 V ATPases associated with a variety of cellular activities
PCGDLBEE_01786 2.6e-106 K Virulence activator alpha C-term
PCGDLBEE_01787 0.0 typA T Elongation factor G C-terminus
PCGDLBEE_01788 1.4e-77
PCGDLBEE_01789 1.5e-188 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
PCGDLBEE_01790 1.2e-188 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
PCGDLBEE_01791 1.7e-41
PCGDLBEE_01792 0.0 MV MacB-like periplasmic core domain
PCGDLBEE_01793 4.9e-148 V ABC transporter, ATP-binding protein
PCGDLBEE_01794 2.1e-188 xerC D Belongs to the 'phage' integrase family. XerC subfamily
PCGDLBEE_01795 2.9e-309 E ABC transporter, substrate-binding protein, family 5
PCGDLBEE_01796 8.9e-154 dppB EP Binding-protein-dependent transport system inner membrane component
PCGDLBEE_01797 1.9e-170 dppC EP N-terminal TM domain of oligopeptide transport permease C
PCGDLBEE_01798 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
PCGDLBEE_01799 3.3e-171 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
PCGDLBEE_01800 4e-145 S Protein of unknown function (DUF3710)
PCGDLBEE_01801 3.8e-134 S Protein of unknown function (DUF3159)
PCGDLBEE_01802 1.2e-241 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PCGDLBEE_01803 1.4e-96
PCGDLBEE_01804 0.0 ctpE P E1-E2 ATPase
PCGDLBEE_01805 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PCGDLBEE_01806 1.1e-118 E Psort location Cytoplasmic, score 8.87
PCGDLBEE_01807 1.4e-81 K helix_turn_helix, Lux Regulon
PCGDLBEE_01808 9.7e-136 ybhL S Belongs to the BI1 family
PCGDLBEE_01809 3.1e-165 ydeD EG EamA-like transporter family
PCGDLBEE_01810 6.9e-145 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
PCGDLBEE_01811 1.3e-276 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PCGDLBEE_01812 2.1e-177 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PCGDLBEE_01813 2.2e-151 fic D Fic/DOC family
PCGDLBEE_01814 0.0 ftsK D FtsK SpoIIIE family protein
PCGDLBEE_01815 3.5e-117 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PCGDLBEE_01816 7.4e-95 cinA 3.5.1.42 S Belongs to the CinA family
PCGDLBEE_01817 7.6e-78 K Helix-turn-helix XRE-family like proteins
PCGDLBEE_01818 1.2e-31 S Protein of unknown function (DUF3046)
PCGDLBEE_01819 1.1e-196 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PCGDLBEE_01820 1.1e-101 recX S Modulates RecA activity
PCGDLBEE_01821 2.4e-113 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PCGDLBEE_01822 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PCGDLBEE_01823 6.7e-190 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PCGDLBEE_01824 2e-118
PCGDLBEE_01825 6.2e-131 plsC2 2.3.1.51 I Phosphate acyltransferases
PCGDLBEE_01826 0.0 pknL 2.7.11.1 KLT PASTA
PCGDLBEE_01827 2.1e-194 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
PCGDLBEE_01828 3.2e-110
PCGDLBEE_01829 1.4e-190 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PCGDLBEE_01830 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
PCGDLBEE_01831 2.2e-221 G Major Facilitator Superfamily
PCGDLBEE_01832 8.3e-171 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PCGDLBEE_01833 0.0 lhr L DEAD DEAH box helicase
PCGDLBEE_01834 1.2e-48 K Psort location Cytoplasmic, score
PCGDLBEE_01835 5.2e-43 K Psort location Cytoplasmic, score
PCGDLBEE_01836 2.3e-42 K AraC-like ligand binding domain
PCGDLBEE_01837 3.1e-104 G Bacterial extracellular solute-binding protein
PCGDLBEE_01838 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
PCGDLBEE_01839 1.5e-233 S Type I phosphodiesterase / nucleotide pyrophosphatase
PCGDLBEE_01840 1.3e-148 S Protein of unknown function (DUF3071)
PCGDLBEE_01841 1.4e-47 S Domain of unknown function (DUF4193)
PCGDLBEE_01842 5.5e-83 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
PCGDLBEE_01843 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PCGDLBEE_01844 1.6e-102 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PCGDLBEE_01845 2.3e-74
PCGDLBEE_01847 6.3e-238 S HipA-like C-terminal domain
PCGDLBEE_01848 5e-50 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
PCGDLBEE_01850 3.3e-26
PCGDLBEE_01851 5.9e-143 fic D Fic/DOC family
PCGDLBEE_01852 1.6e-168 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PCGDLBEE_01853 0.0 gcs2 S A circularly permuted ATPgrasp
PCGDLBEE_01854 7.4e-149 E Transglutaminase/protease-like homologues
PCGDLBEE_01856 2.6e-101 K helix_turn _helix lactose operon repressor
PCGDLBEE_01857 8.9e-125
PCGDLBEE_01858 1.4e-184 nusA K Participates in both transcription termination and antitermination
PCGDLBEE_01859 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PCGDLBEE_01860 4e-81 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PCGDLBEE_01861 5.4e-220 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PCGDLBEE_01862 2.8e-218 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
PCGDLBEE_01863 3.6e-261 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PCGDLBEE_01864 1e-97
PCGDLBEE_01866 9.1e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PCGDLBEE_01867 1e-172 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PCGDLBEE_01868 3.3e-275 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PCGDLBEE_01869 2.1e-73 K Transcriptional regulator
PCGDLBEE_01870 1.5e-197 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
PCGDLBEE_01871 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PCGDLBEE_01872 0.0 crr 2.7.1.193 G pts system, glucose-specific IIABC component
PCGDLBEE_01873 5.9e-163 arbG K CAT RNA binding domain
PCGDLBEE_01874 6.5e-200 I Diacylglycerol kinase catalytic domain
PCGDLBEE_01875 3.3e-242 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PCGDLBEE_01877 5.5e-250 G Bacterial extracellular solute-binding protein
PCGDLBEE_01878 6.9e-173 malC G Binding-protein-dependent transport system inner membrane component
PCGDLBEE_01879 2.5e-167 G ABC transporter permease
PCGDLBEE_01880 0.0 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
PCGDLBEE_01881 6.3e-204 mdsC 2.7.1.162, 2.7.1.39 S Phosphotransferase enzyme family
PCGDLBEE_01882 4.5e-167 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PCGDLBEE_01883 4.4e-118 degU K helix_turn_helix, Lux Regulon
PCGDLBEE_01884 7.6e-236 tcsS3 KT PspC domain
PCGDLBEE_01885 4.8e-283 pspC KT PspC domain
PCGDLBEE_01886 1.9e-66
PCGDLBEE_01887 0.0 S alpha beta
PCGDLBEE_01888 1.4e-110 S Protein of unknown function (DUF4125)
PCGDLBEE_01889 0.0 S Domain of unknown function (DUF4037)
PCGDLBEE_01890 8.9e-215 araJ EGP Major facilitator Superfamily
PCGDLBEE_01892 4.7e-311 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PCGDLBEE_01893 1.2e-174 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
PCGDLBEE_01894 1.1e-138 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PCGDLBEE_01895 5.4e-116 phoU P Plays a role in the regulation of phosphate uptake
PCGDLBEE_01896 6.9e-170 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PCGDLBEE_01897 8.1e-33
PCGDLBEE_01898 4.4e-211 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PCGDLBEE_01899 1.7e-168 usp 3.5.1.28 CBM50 S CHAP domain
PCGDLBEE_01900 1.4e-101 M NlpC/P60 family
PCGDLBEE_01901 1.5e-103 M NlpC/P60 family
PCGDLBEE_01902 1.6e-10 M NlpC/P60 family
PCGDLBEE_01903 2.1e-188 T Universal stress protein family
PCGDLBEE_01904 3.4e-73 attW O OsmC-like protein
PCGDLBEE_01905 7.8e-168 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PCGDLBEE_01906 7.3e-126 folA 1.5.1.3 H dihydrofolate reductase
PCGDLBEE_01907 1.5e-97 ptpA 3.1.3.48 T low molecular weight
PCGDLBEE_01908 4.1e-110 vex2 V ABC transporter, ATP-binding protein
PCGDLBEE_01909 4.4e-209 vex1 V Efflux ABC transporter, permease protein
PCGDLBEE_01910 5.2e-219 vex3 V ABC transporter permease
PCGDLBEE_01911 3.5e-09 L HTH-like domain
PCGDLBEE_01912 0.0 G Glycosyl hydrolase family 20, domain 2
PCGDLBEE_01913 4.5e-219 GK ROK family
PCGDLBEE_01914 1.3e-243 G Bacterial extracellular solute-binding protein
PCGDLBEE_01915 6.3e-22 L Helix-turn-helix domain
PCGDLBEE_01916 4.8e-185 lacR K Transcriptional regulator, LacI family
PCGDLBEE_01917 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PCGDLBEE_01918 9.5e-267 lacS G Psort location CytoplasmicMembrane, score 10.00
PCGDLBEE_01919 7.9e-15 L Phage integrase family
PCGDLBEE_01920 1.3e-26 S PIN domain
PCGDLBEE_01921 2.4e-44 S Helix-turn-helix domain
PCGDLBEE_01922 0.0 XK27_00515 D Cell surface antigen C-terminus
PCGDLBEE_01923 1.3e-119 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
PCGDLBEE_01924 3.4e-94 K FR47-like protein
PCGDLBEE_01925 1.8e-281 S ATPases associated with a variety of cellular activities
PCGDLBEE_01926 6.8e-40
PCGDLBEE_01927 3.3e-101 parA D AAA domain
PCGDLBEE_01928 1.3e-81 S Transcription factor WhiB
PCGDLBEE_01929 4.7e-214 S Helix-turn-helix domain
PCGDLBEE_01930 5.6e-10 S Helix-turn-helix domain
PCGDLBEE_01932 6e-68
PCGDLBEE_01933 3.1e-234 L Phage integrase family
PCGDLBEE_01934 1.6e-80
PCGDLBEE_01935 3.9e-128
PCGDLBEE_01936 3.6e-20 S Protein of unknown function (DUF2599)
PCGDLBEE_01938 4.1e-245 L Phage integrase family
PCGDLBEE_01939 1.4e-35 G Glycosyl hydrolase family 20, domain 2
PCGDLBEE_01940 1.8e-59 G Glycosyl hydrolase family 20, domain 2
PCGDLBEE_01941 1.4e-140 G Glycosyl hydrolase family 20, domain 2
PCGDLBEE_01942 5.7e-65
PCGDLBEE_01945 2.2e-271 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PCGDLBEE_01946 5.1e-251 S Putative ABC-transporter type IV
PCGDLBEE_01947 0.0 pip S YhgE Pip domain protein
PCGDLBEE_01948 2.2e-304 pip S YhgE Pip domain protein
PCGDLBEE_01949 7.1e-101 K Psort location Cytoplasmic, score 8.87
PCGDLBEE_01950 2.4e-61 S FMN_bind
PCGDLBEE_01951 1.7e-145 macB V ABC transporter, ATP-binding protein
PCGDLBEE_01952 2.1e-199 Z012_06715 V FtsX-like permease family
PCGDLBEE_01953 6.5e-227 macB_2 V ABC transporter permease
PCGDLBEE_01954 3.2e-231 S Predicted membrane protein (DUF2318)
PCGDLBEE_01955 1.6e-99 tpd P Fe2+ transport protein
PCGDLBEE_01956 0.0 efeU_1 P Iron permease FTR1 family
PCGDLBEE_01958 1.9e-22 L Phage integrase, N-terminal SAM-like domain
PCGDLBEE_01959 2.7e-31 L Phage integrase, N-terminal SAM-like domain
PCGDLBEE_01962 2.7e-293 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PCGDLBEE_01964 2.2e-145 S Protein of unknown function (DUF805)
PCGDLBEE_01965 1.4e-228 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PCGDLBEE_01966 6.3e-118
PCGDLBEE_01967 2.6e-123 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
PCGDLBEE_01968 4.8e-247 EGP Major facilitator Superfamily
PCGDLBEE_01969 8.4e-96 S GtrA-like protein
PCGDLBEE_01970 6.7e-62 S Macrophage migration inhibitory factor (MIF)
PCGDLBEE_01971 2.5e-286 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
PCGDLBEE_01972 2.7e-310 pepD E Peptidase family C69
PCGDLBEE_01973 3.1e-104 S Phosphatidylethanolamine-binding protein
PCGDLBEE_01974 3.9e-293 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PCGDLBEE_01975 3.3e-37 ptsH G PTS HPr component phosphorylation site
PCGDLBEE_01976 3e-105 K helix_turn _helix lactose operon repressor
PCGDLBEE_01977 3.9e-207 holB 2.7.7.7 L DNA polymerase III
PCGDLBEE_01978 4.5e-115 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PCGDLBEE_01979 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PCGDLBEE_01980 1.6e-165 3.6.1.27 I PAP2 superfamily
PCGDLBEE_01981 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
PCGDLBEE_01982 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PCGDLBEE_01983 8.8e-273 S Calcineurin-like phosphoesterase
PCGDLBEE_01984 9e-153 K FCD
PCGDLBEE_01985 1.2e-246 P Domain of unknown function (DUF4143)
PCGDLBEE_01986 0.0 nanI 3.2.1.18 GH33 G BNR repeat-like domain
PCGDLBEE_01987 3.5e-13 nagA 3.5.1.25 G Amidohydrolase family
PCGDLBEE_01988 4.6e-146 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PCGDLBEE_01989 9.8e-180 nanL 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
PCGDLBEE_01990 6.5e-148 oppF E ATPases associated with a variety of cellular activities
PCGDLBEE_01991 0.0 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
PCGDLBEE_01992 4.6e-153 oppB6 EP Binding-protein-dependent transport system inner membrane component
PCGDLBEE_01993 3.1e-300 E Bacterial extracellular solute-binding proteins, family 5 Middle
PCGDLBEE_01994 3.6e-159 3.5.1.106 I carboxylic ester hydrolase activity
PCGDLBEE_01995 1.3e-125 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PCGDLBEE_01996 4.1e-168 2.7.1.2 GK ROK family
PCGDLBEE_01997 1.5e-174 L Domain of unknown function (DUF4862)
PCGDLBEE_01998 2.5e-112
PCGDLBEE_01999 2.9e-212 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PCGDLBEE_02000 1.8e-96 askB 1.1.1.3, 2.7.2.4 E ACT domain
PCGDLBEE_02001 1.3e-134 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
PCGDLBEE_02002 3.6e-193 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PCGDLBEE_02003 4.8e-69 V Abi-like protein
PCGDLBEE_02004 6.6e-197 3.4.22.70 M Sortase family
PCGDLBEE_02005 8.6e-31 S ATPase domain predominantly from Archaea
PCGDLBEE_02006 8.7e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PCGDLBEE_02007 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
PCGDLBEE_02008 3.5e-95 K Bacterial regulatory proteins, tetR family
PCGDLBEE_02009 1.1e-214 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
PCGDLBEE_02010 6.5e-54 S TIGRFAM helicase secretion neighborhood TadE-like protein
PCGDLBEE_02011 1.4e-57 U TadE-like protein
PCGDLBEE_02012 1.1e-41 S Protein of unknown function (DUF4244)
PCGDLBEE_02013 5.8e-115 gspF NU Type II secretion system (T2SS), protein F
PCGDLBEE_02014 9.8e-74 U Type ii secretion system
PCGDLBEE_02015 5.5e-189 cpaF U Type II IV secretion system protein
PCGDLBEE_02016 6e-122 cpaE D bacterial-type flagellum organization
PCGDLBEE_02017 1e-133 dedA S SNARE associated Golgi protein
PCGDLBEE_02018 6.7e-127 S HAD hydrolase, family IA, variant 3
PCGDLBEE_02019 2.8e-140 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
PCGDLBEE_02020 3.3e-114 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
PCGDLBEE_02021 3.1e-17 F Psort location CytoplasmicMembrane, score 10.00
PCGDLBEE_02022 2.7e-103 hspR K transcriptional regulator, MerR family
PCGDLBEE_02023 9.4e-157 dnaJ1 O DnaJ molecular chaperone homology domain
PCGDLBEE_02024 5.2e-58 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PCGDLBEE_02025 0.0 dnaK O Heat shock 70 kDa protein
PCGDLBEE_02026 0.0 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 M Aamy_C

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)