ORF_ID e_value Gene_name EC_number CAZy COGs Description
PDJILDJI_00001 5.8e-64
PDJILDJI_00002 4.1e-195 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PDJILDJI_00003 2.3e-75 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PDJILDJI_00004 0.0 dnaK O Heat shock 70 kDa protein
PDJILDJI_00005 5.1e-199 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PDJILDJI_00006 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PDJILDJI_00007 4.1e-275 pipD E Dipeptidase
PDJILDJI_00008 4.7e-199 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
PDJILDJI_00010 2.5e-280 pipD E Dipeptidase
PDJILDJI_00011 3.6e-241 pbuX F xanthine permease
PDJILDJI_00012 1.8e-251 nhaC C Na H antiporter NhaC
PDJILDJI_00013 1.8e-240 S C4-dicarboxylate anaerobic carrier
PDJILDJI_00014 1.1e-27 S C4-dicarboxylate anaerobic carrier
PDJILDJI_00015 8e-125 pgm3 3.1.3.73 G phosphoglycerate mutase family
PDJILDJI_00016 1.3e-41
PDJILDJI_00017 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PDJILDJI_00018 1.7e-207 gldA 1.1.1.6 C dehydrogenase
PDJILDJI_00019 5.5e-126 S Alpha beta hydrolase
PDJILDJI_00020 3.5e-219 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PDJILDJI_00021 2.5e-101
PDJILDJI_00023 1.4e-124 yciB M ErfK YbiS YcfS YnhG
PDJILDJI_00024 1.7e-103 dedA 3.1.3.1 S SNARE associated Golgi protein
PDJILDJI_00025 1e-232 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PDJILDJI_00026 1.5e-80 K AsnC family
PDJILDJI_00027 1.5e-80 uspA T universal stress protein
PDJILDJI_00028 1.9e-41 ltrA S Bacterial low temperature requirement A protein (LtrA)
PDJILDJI_00029 0.0 lacS G Transporter
PDJILDJI_00030 9.8e-09 K DNA-binding helix-turn-helix protein
PDJILDJI_00031 9.7e-112 L Transposase
PDJILDJI_00032 4.9e-89 3.1.21.3 L Type I restriction modification DNA specificity domain
PDJILDJI_00033 8.2e-50 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDJILDJI_00034 2.4e-265 glnPH2 P ABC transporter permease
PDJILDJI_00035 7.5e-23 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PDJILDJI_00036 3.8e-70 yqeY S YqeY-like protein
PDJILDJI_00037 5.8e-58
PDJILDJI_00040 7.2e-11 T PFAM SpoVT AbrB
PDJILDJI_00041 2.7e-23 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PDJILDJI_00042 5.8e-15 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
PDJILDJI_00043 8.4e-18 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PDJILDJI_00047 2.3e-66 ruvB 3.6.4.12 L four-way junction helicase activity
PDJILDJI_00048 2.2e-48
PDJILDJI_00049 4e-129
PDJILDJI_00050 5.8e-36 K Cro/C1-type HTH DNA-binding domain
PDJILDJI_00051 4.7e-201 mod 2.1.1.72, 3.1.21.5 L DNA methylase
PDJILDJI_00052 2.9e-24 mod 2.1.1.72, 3.1.21.5 L DNA methylase
PDJILDJI_00053 0.0 res 2.1.1.72, 3.1.21.5 L Type III restriction enzyme, res subunit
PDJILDJI_00054 3.3e-207 K DNA binding
PDJILDJI_00055 0.0 L helicase activity
PDJILDJI_00058 4.4e-17
PDJILDJI_00059 9.3e-56
PDJILDJI_00060 7.6e-208 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PDJILDJI_00062 2.6e-228 yfmL L DEAD DEAH box helicase
PDJILDJI_00063 4.5e-191 mocA S Oxidoreductase
PDJILDJI_00064 9.1e-62 S Domain of unknown function (DUF4828)
PDJILDJI_00065 3.3e-106 yvdD 3.2.2.10 S Belongs to the LOG family
PDJILDJI_00066 1.3e-165 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PDJILDJI_00067 3.7e-298 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
PDJILDJI_00068 9.3e-197 S Protein of unknown function (DUF3114)
PDJILDJI_00069 6.5e-81 yjcF 3.5.4.33, 4.4.1.8 K protein acetylation
PDJILDJI_00070 4.6e-118 ybhL S Belongs to the BI1 family
PDJILDJI_00071 3.1e-21
PDJILDJI_00072 9.1e-92 K Acetyltransferase (GNAT) family
PDJILDJI_00073 5.4e-77 K LytTr DNA-binding domain
PDJILDJI_00074 7.3e-69 S Protein of unknown function (DUF3021)
PDJILDJI_00075 9.8e-153 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
PDJILDJI_00076 8.5e-172 XK27_00915 C Luciferase-like monooxygenase
PDJILDJI_00077 2.9e-73 ogt 2.1.1.63 L Methyltransferase
PDJILDJI_00078 6.3e-122 pnb C nitroreductase
PDJILDJI_00079 3.3e-92
PDJILDJI_00080 1.4e-90 S B3 4 domain
PDJILDJI_00081 2.1e-249 gor 1.8.1.7 C pyridine nucleotide-disulfide oxidoreductase
PDJILDJI_00082 7.9e-158 amtB P ammonium transporter
PDJILDJI_00083 1.9e-37 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PDJILDJI_00085 1.3e-46
PDJILDJI_00086 2.7e-95 S PFAM Archaeal ATPase
PDJILDJI_00089 1.3e-146 2.3.1.19 K Helix-turn-helix XRE-family like proteins
PDJILDJI_00090 4.5e-48 L PFAM transposase IS200-family protein
PDJILDJI_00091 8.8e-71 yneR S Belongs to the HesB IscA family
PDJILDJI_00092 0.0 S membrane
PDJILDJI_00093 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
PDJILDJI_00094 4.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PDJILDJI_00095 1.7e-99 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PDJILDJI_00096 3.4e-12 gluP 3.4.21.105 S Peptidase, S54 family
PDJILDJI_00097 3.8e-46 gluP 3.4.21.105 S Peptidase, S54 family
PDJILDJI_00098 7.4e-36 yqgQ S Bacterial protein of unknown function (DUF910)
PDJILDJI_00099 5.6e-183 glk 2.7.1.2 G Glucokinase
PDJILDJI_00100 3.4e-67 yqhL P Rhodanese-like protein
PDJILDJI_00101 5.9e-22 S Protein of unknown function (DUF3042)
PDJILDJI_00102 3.3e-177 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PDJILDJI_00103 2.4e-261 glnA 6.3.1.2 E glutamine synthetase
PDJILDJI_00104 1.4e-294 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PDJILDJI_00105 4.8e-221 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
PDJILDJI_00106 3.9e-12
PDJILDJI_00107 2.2e-154 P Belongs to the nlpA lipoprotein family
PDJILDJI_00108 2.5e-261 S Putative peptidoglycan binding domain
PDJILDJI_00109 3.5e-109 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
PDJILDJI_00110 2.2e-87
PDJILDJI_00111 5.7e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
PDJILDJI_00112 2.6e-214 yttB EGP Major facilitator Superfamily
PDJILDJI_00113 8.2e-103
PDJILDJI_00114 3e-24
PDJILDJI_00115 5.1e-173 scrR K Transcriptional regulator, LacI family
PDJILDJI_00116 2e-212 acm2 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PDJILDJI_00117 3.5e-49 czrA K Transcriptional regulator, ArsR family
PDJILDJI_00118 4.6e-38
PDJILDJI_00119 0.0 yhcA V ABC transporter, ATP-binding protein
PDJILDJI_00120 2.3e-114 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PDJILDJI_00121 2.1e-183 hrtB V ABC transporter permease
PDJILDJI_00122 2.6e-86 ygfC K transcriptional regulator (TetR family)
PDJILDJI_00123 9.9e-191 tdh 1.1.1.14 E Alcohol dehydrogenase GroES-like domain
PDJILDJI_00124 4.3e-289 mntH P H( )-stimulated, divalent metal cation uptake system
PDJILDJI_00125 3e-34
PDJILDJI_00126 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PDJILDJI_00127 9.2e-74 L hmm pf00665
PDJILDJI_00128 1.6e-52 azlD S branched-chain amino acid
PDJILDJI_00129 3.7e-136 azlC E AzlC protein
PDJILDJI_00130 4.2e-198 hpk31 2.7.13.3 T Histidine kinase
PDJILDJI_00131 1.2e-123 K response regulator
PDJILDJI_00132 2.9e-207 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PDJILDJI_00133 2.8e-171 deoR K sugar-binding domain protein
PDJILDJI_00134 1.1e-130 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
PDJILDJI_00135 1.1e-234 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
PDJILDJI_00136 2.9e-234 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
PDJILDJI_00137 9.8e-118 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PDJILDJI_00138 2.2e-134 XK27_01040 S Protein of unknown function (DUF1129)
PDJILDJI_00139 8.8e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PDJILDJI_00140 5.4e-32 yyzM S Bacterial protein of unknown function (DUF951)
PDJILDJI_00141 1.7e-154 spo0J K Belongs to the ParB family
PDJILDJI_00142 2.6e-138 soj D Sporulation initiation inhibitor
PDJILDJI_00143 4.3e-151 noc K Belongs to the ParB family
PDJILDJI_00144 2.5e-127 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PDJILDJI_00145 1.4e-161 fadB4 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
PDJILDJI_00146 5.6e-169 rihC 3.2.2.1 F Nucleoside
PDJILDJI_00147 2.3e-218 nupG F Nucleoside transporter
PDJILDJI_00148 7.2e-221 cycA E Amino acid permease
PDJILDJI_00150 1.4e-138 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDJILDJI_00151 1.2e-264 glnP P ABC transporter
PDJILDJI_00152 3.8e-251 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PDJILDJI_00153 9.2e-74 L hmm pf00665
PDJILDJI_00155 1.1e-159 L restriction endonuclease
PDJILDJI_00156 5.9e-89 mrr L restriction endonuclease
PDJILDJI_00157 0.0 L PLD-like domain
PDJILDJI_00159 1.2e-177 rihA 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PDJILDJI_00160 4e-92
PDJILDJI_00161 3.5e-293 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PDJILDJI_00162 2.7e-25 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PDJILDJI_00163 0.0 yjbQ P TrkA C-terminal domain protein
PDJILDJI_00164 7.4e-277 pipD E Dipeptidase
PDJILDJI_00165 2.4e-78
PDJILDJI_00166 9.8e-32 ykzG S Belongs to the UPF0356 family
PDJILDJI_00167 1.3e-179 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic
PDJILDJI_00168 5.7e-29
PDJILDJI_00169 1.2e-133 mltD CBM50 M NlpC P60 family protein
PDJILDJI_00171 7.7e-58
PDJILDJI_00172 1e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PDJILDJI_00173 1.7e-219 EG GntP family permease
PDJILDJI_00174 8.5e-84 KT Putative sugar diacid recognition
PDJILDJI_00175 3.9e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PDJILDJI_00176 5.5e-217 patA 2.6.1.1 E Aminotransferase
PDJILDJI_00177 2.2e-137 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PDJILDJI_00178 1.3e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PDJILDJI_00179 8.5e-223 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PDJILDJI_00180 1.2e-76 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PDJILDJI_00181 2.3e-248 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PDJILDJI_00182 5.1e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
PDJILDJI_00183 6.5e-171 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PDJILDJI_00184 9e-23 UW LPXTG-motif cell wall anchor domain protein
PDJILDJI_00185 9.2e-74 L hmm pf00665
PDJILDJI_00186 8.9e-178 L Belongs to the 'phage' integrase family
PDJILDJI_00187 1.6e-69 hsdS 3.1.21.3 V type I restriction modification DNA specificity domain protein
PDJILDJI_00188 2.7e-134 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PDJILDJI_00189 3.7e-190 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDJILDJI_00190 3.6e-310 lmrA V ABC transporter, ATP-binding protein
PDJILDJI_00191 0.0 yfiC V ABC transporter
PDJILDJI_00192 7e-283 pipD E Dipeptidase
PDJILDJI_00193 3.9e-87 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PDJILDJI_00194 1.4e-133 gntR K UbiC transcription regulator-associated domain protein
PDJILDJI_00195 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PDJILDJI_00196 2.7e-244 yagE E amino acid
PDJILDJI_00197 4.5e-140 aroD S Serine hydrolase (FSH1)
PDJILDJI_00198 8.2e-241 brnQ U Component of the transport system for branched-chain amino acids
PDJILDJI_00199 5.2e-167 GK ROK family
PDJILDJI_00200 0.0 tetP J elongation factor G
PDJILDJI_00201 5.1e-81 uspA T universal stress protein
PDJILDJI_00202 2.1e-193 lplA 6.3.1.20 H Lipoate-protein ligase
PDJILDJI_00203 7.1e-63
PDJILDJI_00204 5.2e-14
PDJILDJI_00205 1.4e-212 EGP Major facilitator Superfamily
PDJILDJI_00206 1.9e-256 G PTS system Galactitol-specific IIC component
PDJILDJI_00207 2.6e-180 1.6.5.5 C Zinc-binding dehydrogenase
PDJILDJI_00208 1.1e-161
PDJILDJI_00209 1e-72 K Transcriptional regulator
PDJILDJI_00210 3.7e-190 D Alpha beta
PDJILDJI_00211 2.2e-52 ypaA S Protein of unknown function (DUF1304)
PDJILDJI_00212 0.0 yjcE P Sodium proton antiporter
PDJILDJI_00213 1.6e-52 yvlA
PDJILDJI_00214 1.8e-113 P Cobalt transport protein
PDJILDJI_00215 1.6e-247 cbiO1 S ABC transporter, ATP-binding protein
PDJILDJI_00216 3e-96 S ABC-type cobalt transport system, permease component
PDJILDJI_00217 3.3e-133 S membrane transporter protein
PDJILDJI_00218 2.5e-138 IQ KR domain
PDJILDJI_00219 3.6e-182 iunH2 3.2.2.1 F nucleoside hydrolase
PDJILDJI_00220 2.4e-181 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
PDJILDJI_00221 1.5e-157 L hmm pf00665
PDJILDJI_00222 1.7e-128 L Helix-turn-helix domain
PDJILDJI_00223 4e-73 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
PDJILDJI_00224 1.3e-91 L Belongs to the 'phage' integrase family
PDJILDJI_00225 6e-37 3.1.21.3 V Type I restriction modification DNA specificity domain
PDJILDJI_00226 2.8e-149 V Type I restriction-modification system methyltransferase subunit()
PDJILDJI_00229 4e-19 D nuclear chromosome segregation
PDJILDJI_00240 1.7e-44 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PDJILDJI_00241 1.6e-105 ypsA S Belongs to the UPF0398 family
PDJILDJI_00242 4.4e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PDJILDJI_00243 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PDJILDJI_00244 2e-161 EG EamA-like transporter family
PDJILDJI_00245 3e-125 dnaD L DnaD domain protein
PDJILDJI_00246 2.9e-85 ypmB S Protein conserved in bacteria
PDJILDJI_00247 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PDJILDJI_00248 5.7e-172 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
PDJILDJI_00249 4.6e-169 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PDJILDJI_00250 2.1e-213 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PDJILDJI_00251 1.7e-193 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PDJILDJI_00252 4.9e-87 S Protein of unknown function (DUF1440)
PDJILDJI_00253 0.0 rafA 3.2.1.22 G alpha-galactosidase
PDJILDJI_00254 4.2e-189 galR K Periplasmic binding protein-like domain
PDJILDJI_00255 1.9e-169 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PDJILDJI_00256 1.4e-178 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PDJILDJI_00257 2.6e-124 lrgB M LrgB-like family
PDJILDJI_00258 1.9e-66 lrgA S LrgA family
PDJILDJI_00259 2.4e-130 lytT K response regulator receiver
PDJILDJI_00260 0.0 lytS 2.7.13.3 T LytS YhcK-type transmembrane receptor domain protein
PDJILDJI_00261 6.8e-148 f42a O Band 7 protein
PDJILDJI_00262 1e-259 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
PDJILDJI_00263 1.3e-156 yitU 3.1.3.104 S hydrolase
PDJILDJI_00264 9.2e-39 S Cytochrome B5
PDJILDJI_00265 5.4e-113 nreC K PFAM regulatory protein LuxR
PDJILDJI_00266 3.6e-160 hipB K Helix-turn-helix
PDJILDJI_00267 2.8e-57 yitW S Iron-sulfur cluster assembly protein
PDJILDJI_00268 1.6e-271 sufB O assembly protein SufB
PDJILDJI_00269 6.5e-81 nifU C SUF system FeS assembly protein, NifU family
PDJILDJI_00270 3.6e-235 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PDJILDJI_00271 1.6e-238 sufD O FeS assembly protein SufD
PDJILDJI_00272 6.5e-145 sufC O FeS assembly ATPase SufC
PDJILDJI_00273 4.2e-32 feoA P FeoA domain
PDJILDJI_00274 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
PDJILDJI_00275 2.2e-268 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
PDJILDJI_00276 5.8e-157 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PDJILDJI_00277 3.5e-64 ydiI Q Thioesterase superfamily
PDJILDJI_00278 7.8e-108 yvrI K sigma factor activity
PDJILDJI_00279 5.6e-201 G Transporter, major facilitator family protein
PDJILDJI_00280 0.0 S Bacterial membrane protein YfhO
PDJILDJI_00281 2.4e-101 T Ion transport 2 domain protein
PDJILDJI_00282 3.9e-78 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PDJILDJI_00283 2.5e-225 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PDJILDJI_00284 1.2e-95 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
PDJILDJI_00285 5.3e-195 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PDJILDJI_00286 5.9e-114 L PFAM Integrase catalytic region
PDJILDJI_00287 1e-130 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDJILDJI_00288 6.9e-242 purD 6.3.4.13 F Belongs to the GARS family
PDJILDJI_00289 8.6e-295 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PDJILDJI_00290 2.8e-105 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PDJILDJI_00291 4e-195 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PDJILDJI_00292 2.2e-276 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PDJILDJI_00293 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDJILDJI_00294 2.3e-127 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDJILDJI_00295 7e-37 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PDJILDJI_00296 9.7e-132 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PDJILDJI_00297 2e-252 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PDJILDJI_00298 5.2e-212 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PDJILDJI_00299 4.3e-83 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PDJILDJI_00300 1.3e-131 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
PDJILDJI_00301 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
PDJILDJI_00302 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PDJILDJI_00303 4.9e-177 K AI-2E family transporter
PDJILDJI_00304 1.1e-236 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PDJILDJI_00305 6.7e-95 ribA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PDJILDJI_00306 6.2e-114 thiE 2.5.1.3, 2.7.6.2, 5.4.2.6 S Haloacid dehalogenase-like hydrolase
PDJILDJI_00307 2.5e-115 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PDJILDJI_00308 6e-129 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PDJILDJI_00309 8.6e-173 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PDJILDJI_00310 3.9e-248 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PDJILDJI_00311 9.5e-172 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PDJILDJI_00312 7.4e-134 K LysR substrate binding domain
PDJILDJI_00313 4.5e-48 L PFAM transposase IS200-family protein
PDJILDJI_00314 3e-75
PDJILDJI_00315 7.4e-228 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PDJILDJI_00316 8e-174 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PDJILDJI_00317 1e-37 M Peptidase_C39 like family
PDJILDJI_00318 1.2e-111 S Psort location CytoplasmicMembrane, score
PDJILDJI_00319 6.7e-37
PDJILDJI_00320 8.8e-75 cps3I G Acyltransferase family
PDJILDJI_00321 5.7e-310 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PDJILDJI_00322 1.4e-230 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PDJILDJI_00323 2.5e-163 yueF S AI-2E family transporter
PDJILDJI_00324 1.3e-20
PDJILDJI_00325 1.4e-53 M repeat protein
PDJILDJI_00326 5.6e-68 S integral membrane protein
PDJILDJI_00327 3.6e-68 acmD 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PDJILDJI_00328 8.2e-185 lacR K Transcriptional regulator
PDJILDJI_00329 2.1e-107 lacS G Transporter
PDJILDJI_00330 5.1e-229 lacS G Transporter
PDJILDJI_00331 0.0 lacZ 3.2.1.23 G -beta-galactosidase
PDJILDJI_00332 5.1e-176 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PDJILDJI_00333 1.9e-156 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PDJILDJI_00334 1.2e-129 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PDJILDJI_00335 2.4e-223 mdtG EGP Major facilitator Superfamily
PDJILDJI_00336 3.2e-166 T Calcineurin-like phosphoesterase superfamily domain
PDJILDJI_00337 7e-43 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PDJILDJI_00338 2.3e-61
PDJILDJI_00340 1.3e-70 O Preprotein translocase subunit SecB
PDJILDJI_00341 2.9e-168 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PDJILDJI_00342 8.5e-249 mmuP E amino acid
PDJILDJI_00344 9.2e-297 L Transposase IS66 family
PDJILDJI_00345 5.4e-67 XK27_01125 L PFAM IS66 Orf2 family protein
PDJILDJI_00347 1.2e-61 T Toxin-antitoxin system, toxin component, MazF family
PDJILDJI_00348 5.2e-37
PDJILDJI_00350 0.0 snf 2.7.11.1 KL domain protein
PDJILDJI_00351 1.4e-144 ywqE 3.1.3.48 GM PHP domain protein
PDJILDJI_00352 3.8e-207 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PDJILDJI_00353 0.0 sbcC L Putative exonuclease SbcCD, C subunit
PDJILDJI_00354 2e-17 L nuclease
PDJILDJI_00355 1.3e-48 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
PDJILDJI_00356 6.2e-70
PDJILDJI_00357 6.7e-104 fic D Fic/DOC family
PDJILDJI_00358 1.5e-121 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PDJILDJI_00359 1.3e-151 3.1.3.73 G Belongs to the phosphoglycerate mutase family
PDJILDJI_00360 0.0
PDJILDJI_00361 7.2e-88
PDJILDJI_00362 1.8e-263
PDJILDJI_00363 9.2e-25
PDJILDJI_00364 8.6e-202 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
PDJILDJI_00365 1.3e-130 2.4.1.52 GT4 M Glycosyl transferases group 1
PDJILDJI_00366 7e-14 L Integrase core domain
PDJILDJI_00367 2e-192 L Integrase core domain
PDJILDJI_00368 8.2e-126 O Bacterial dnaA protein
PDJILDJI_00369 3.2e-172 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PDJILDJI_00372 1.4e-87 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PDJILDJI_00373 1.7e-179 ABC-SBP S ABC transporter
PDJILDJI_00374 1.6e-88 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
PDJILDJI_00375 2.5e-215 htrA 3.4.21.107 O serine protease
PDJILDJI_00376 4.5e-154 vicX 3.1.26.11 S domain protein
PDJILDJI_00377 2.7e-149 yycI S YycH protein
PDJILDJI_00378 2.1e-246 yycH S YycH protein
PDJILDJI_00379 0.0 vicK 2.7.13.3 T Histidine kinase
PDJILDJI_00380 6.8e-130 K response regulator
PDJILDJI_00382 5.2e-309 lmrA 3.6.3.44 V ABC transporter
PDJILDJI_00383 3.3e-74 K helix_turn_helix multiple antibiotic resistance protein
PDJILDJI_00385 5.5e-280 O Arylsulfotransferase (ASST)
PDJILDJI_00386 6.1e-293 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PDJILDJI_00387 1.1e-189 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PDJILDJI_00388 1.4e-170 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PDJILDJI_00389 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PDJILDJI_00390 1.5e-97 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PDJILDJI_00391 4.9e-257 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PDJILDJI_00392 9.8e-67 yabR J RNA binding
PDJILDJI_00393 3.3e-56 divIC D Septum formation initiator
PDJILDJI_00394 8.1e-39 yabO J S4 domain protein
PDJILDJI_00395 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PDJILDJI_00396 3.3e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PDJILDJI_00397 4e-113 S (CBS) domain
PDJILDJI_00398 1.2e-146 tesE Q hydratase
PDJILDJI_00399 4.7e-243 codA 3.5.4.1 F cytosine deaminase
PDJILDJI_00400 6.8e-251 U Belongs to the purine-cytosine permease (2.A.39) family
PDJILDJI_00401 3.2e-62 L Toxic component of a toxin-antitoxin (TA) module
PDJILDJI_00402 1.9e-211 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PDJILDJI_00403 2.2e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PDJILDJI_00405 1.1e-294 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDJILDJI_00406 3.9e-234 dltB M MBOAT, membrane-bound O-acyltransferase family
PDJILDJI_00407 2.8e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PDJILDJI_00408 1.4e-253 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PDJILDJI_00409 9e-167 glsA 3.5.1.2 E Belongs to the glutaminase family
PDJILDJI_00410 2.2e-136 sprD D Domain of Unknown Function (DUF1542)
PDJILDJI_00411 3.1e-126 L PFAM Integrase catalytic region
PDJILDJI_00412 1.4e-249 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PDJILDJI_00413 1.8e-259 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PDJILDJI_00414 2.6e-158 htpX O Belongs to the peptidase M48B family
PDJILDJI_00415 7e-93 lemA S LemA family
PDJILDJI_00416 1.5e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PDJILDJI_00417 4.6e-120 pgm3 G Belongs to the phosphoglycerate mutase family
PDJILDJI_00418 1.4e-161 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PDJILDJI_00419 2.3e-139 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PDJILDJI_00420 2.5e-234 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PDJILDJI_00421 1.1e-124 srtA 3.4.22.70 M sortase family
PDJILDJI_00422 1.3e-165 S Alpha/beta hydrolase of unknown function (DUF915)
PDJILDJI_00423 1.2e-236 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PDJILDJI_00424 4.6e-41 rpmE2 J Ribosomal protein L31
PDJILDJI_00425 5.7e-236 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDJILDJI_00426 8.2e-102 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PDJILDJI_00427 3e-209 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
PDJILDJI_00428 2.4e-181 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
PDJILDJI_00429 1.8e-224 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PDJILDJI_00430 4.1e-275 lpdA 1.8.1.4 C Dehydrogenase
PDJILDJI_00431 1.9e-46 yktA S Belongs to the UPF0223 family
PDJILDJI_00432 2.8e-137 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
PDJILDJI_00433 0.0 typA T GTP-binding protein TypA
PDJILDJI_00434 2e-222 ftsW D Belongs to the SEDS family
PDJILDJI_00435 3e-44 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
PDJILDJI_00436 6.5e-99 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PDJILDJI_00437 5.1e-90 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PDJILDJI_00438 6.7e-198 ylbL T Belongs to the peptidase S16 family
PDJILDJI_00439 2.6e-80 comEA L Competence protein ComEA
PDJILDJI_00440 6.9e-89 comEB 3.5.4.12 F ComE operon protein 2
PDJILDJI_00441 0.0 comEC S Competence protein ComEC
PDJILDJI_00442 1.2e-146 holA 2.7.7.7 L DNA polymerase III delta subunit
PDJILDJI_00443 5.1e-35 rpsT J Binds directly to 16S ribosomal RNA
PDJILDJI_00444 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PDJILDJI_00445 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDJILDJI_00446 3.5e-163 S Tetratricopeptide repeat
PDJILDJI_00447 3.8e-226 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PDJILDJI_00448 6.3e-238 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PDJILDJI_00449 1.4e-234 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PDJILDJI_00450 3.6e-108 engB D Necessary for normal cell division and for the maintenance of normal septation
PDJILDJI_00451 6.1e-60 MA20_27270 S mazG nucleotide pyrophosphohydrolase
PDJILDJI_00452 1.3e-08
PDJILDJI_00453 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PDJILDJI_00454 4e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PDJILDJI_00455 1.3e-176 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PDJILDJI_00456 6.5e-156 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PDJILDJI_00457 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PDJILDJI_00458 2.7e-91 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PDJILDJI_00459 2.1e-87
PDJILDJI_00460 4.6e-56 sip L Belongs to the 'phage' integrase family
PDJILDJI_00461 9.7e-11 K Cro/C1-type HTH DNA-binding domain
PDJILDJI_00466 7.3e-46 L Bifunctional DNA primase/polymerase, N-terminal
PDJILDJI_00467 1.3e-90 S Phage plasmid primase, P4
PDJILDJI_00470 1e-27 L Phage-associated protein
PDJILDJI_00471 3.2e-22 terS L Phage terminase, small subunit
PDJILDJI_00472 1.5e-202 terL S overlaps another CDS with the same product name
PDJILDJI_00473 5.2e-140 S Phage portal protein
PDJILDJI_00474 1.2e-248 S Caudovirus prohead serine protease
PDJILDJI_00475 1.2e-19 S Phage gp6-like head-tail connector protein
PDJILDJI_00476 9.3e-18
PDJILDJI_00478 1.8e-124 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDJILDJI_00479 1.5e-211 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PDJILDJI_00480 4.7e-114 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PDJILDJI_00481 1.3e-35 ynzC S UPF0291 protein
PDJILDJI_00482 9.8e-30 yneF S Uncharacterised protein family (UPF0154)
PDJILDJI_00483 4.6e-117 plsC 2.3.1.51 I Acyltransferase
PDJILDJI_00484 6.4e-142 yabB 2.1.1.223 L Methyltransferase small domain
PDJILDJI_00485 5.4e-49 yazA L GIY-YIG catalytic domain protein
PDJILDJI_00486 4.4e-183 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDJILDJI_00487 1.2e-143 rpsB J Belongs to the universal ribosomal protein uS2 family
PDJILDJI_00488 2.4e-153 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PDJILDJI_00489 2e-129 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PDJILDJI_00490 2.2e-94 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PDJILDJI_00491 9.3e-141 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PDJILDJI_00492 1.3e-137 cdsA 2.7.7.41 I Belongs to the CDS family
PDJILDJI_00493 9.2e-234 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PDJILDJI_00494 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PDJILDJI_00495 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDJILDJI_00496 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
PDJILDJI_00497 1e-215 nusA K Participates in both transcription termination and antitermination
PDJILDJI_00498 1e-44 ylxR K Protein of unknown function (DUF448)
PDJILDJI_00499 4.5e-49 ylxQ J ribosomal protein
PDJILDJI_00500 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PDJILDJI_00501 2.1e-58 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PDJILDJI_00502 6.2e-168 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PDJILDJI_00503 4.5e-177 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PDJILDJI_00504 0.0 uup S ABC transporter, ATP-binding protein
PDJILDJI_00505 8e-182 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PDJILDJI_00506 2.5e-225 mtnE 2.6.1.83 E Aminotransferase
PDJILDJI_00507 2.3e-142 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
PDJILDJI_00508 1.4e-136 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PDJILDJI_00509 1.9e-228 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PDJILDJI_00510 3.6e-132 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PDJILDJI_00511 8.6e-198 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PDJILDJI_00512 3.6e-102 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PDJILDJI_00513 7e-130 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PDJILDJI_00514 5.9e-114 L PFAM Integrase catalytic region
PDJILDJI_00515 9.7e-173
PDJILDJI_00516 1.3e-240 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PDJILDJI_00517 4.4e-100 L Helix-turn-helix domain
PDJILDJI_00519 3.1e-226 yxiO S Vacuole effluxer Atg22 like
PDJILDJI_00520 1.8e-214 npp S type I phosphodiesterase nucleotide pyrophosphatase
PDJILDJI_00521 1.1e-240 E amino acid
PDJILDJI_00522 2.3e-181 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PDJILDJI_00524 6.7e-212 yxjG_1 E methionine synthase, vitamin-B12 independent
PDJILDJI_00525 7.8e-41 S Cytochrome B5
PDJILDJI_00526 5.4e-09 S Cytochrome B5
PDJILDJI_00527 1.8e-39 S Cytochrome B5
PDJILDJI_00528 1.7e-70 elaA S Gnat family
PDJILDJI_00529 6.6e-119 GM NmrA-like family
PDJILDJI_00530 2.5e-52 hxlR K Transcriptional regulator, HxlR family
PDJILDJI_00531 3.7e-108 XK27_02070 S Nitroreductase family
PDJILDJI_00532 7.8e-79 K Transcriptional regulator, HxlR family
PDJILDJI_00533 1.8e-229
PDJILDJI_00534 6.5e-210 EGP Major facilitator Superfamily
PDJILDJI_00535 9.8e-255 pepC 3.4.22.40 E aminopeptidase
PDJILDJI_00536 2e-112 ylbE GM NAD dependent epimerase dehydratase family protein
PDJILDJI_00537 0.0 pepN 3.4.11.2 E aminopeptidase
PDJILDJI_00538 2e-92 folT S ECF transporter, substrate-specific component
PDJILDJI_00539 1.9e-197 asnA 6.3.1.1 F aspartate--ammonia ligase
PDJILDJI_00540 1.3e-256 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PDJILDJI_00541 5e-122 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
PDJILDJI_00542 1.2e-203 2.7.7.65 T GGDEF domain
PDJILDJI_00544 5.4e-116 yrkL S Flavodoxin-like fold
PDJILDJI_00545 9.5e-55
PDJILDJI_00546 2e-15 S Domain of unknown function (DUF4767)
PDJILDJI_00547 5.8e-98 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PDJILDJI_00548 2.9e-27 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PDJILDJI_00549 6.9e-49
PDJILDJI_00550 7.6e-205 nrnB S DHHA1 domain
PDJILDJI_00551 1.5e-228 S Uncharacterized protein conserved in bacteria (DUF2325)
PDJILDJI_00552 3.2e-248 brnQ U Component of the transport system for branched-chain amino acids
PDJILDJI_00553 2e-106 NU mannosyl-glycoprotein
PDJILDJI_00554 2.3e-142 S Putative ABC-transporter type IV
PDJILDJI_00555 7.8e-272 S ABC transporter, ATP-binding protein
PDJILDJI_00556 8.2e-48
PDJILDJI_00557 4.4e-100 L Helix-turn-helix domain
PDJILDJI_00559 4e-173 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDJILDJI_00560 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PDJILDJI_00561 9e-119 S Repeat protein
PDJILDJI_00562 1.1e-121 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
PDJILDJI_00563 1.8e-225 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PDJILDJI_00564 1.3e-57 XK27_04120 S Putative amino acid metabolism
PDJILDJI_00565 1.1e-214 iscS 2.8.1.7 E Aminotransferase class V
PDJILDJI_00566 1e-125 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PDJILDJI_00568 1.1e-98 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PDJILDJI_00569 4.2e-32 cspA K Cold shock protein
PDJILDJI_00570 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PDJILDJI_00571 1.9e-42 divIVA D DivIVA domain protein
PDJILDJI_00572 5.1e-142 ylmH S S4 domain protein
PDJILDJI_00573 3.2e-40 yggT S YGGT family
PDJILDJI_00574 9.4e-71 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PDJILDJI_00575 5.3e-226 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PDJILDJI_00576 6.6e-254 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PDJILDJI_00577 8.7e-148 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PDJILDJI_00578 3e-204 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PDJILDJI_00579 8.5e-262 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PDJILDJI_00580 3.4e-180 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PDJILDJI_00581 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PDJILDJI_00582 2.6e-56 ftsL D Cell division protein FtsL
PDJILDJI_00583 1.2e-174 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PDJILDJI_00584 3.1e-77 mraZ K Belongs to the MraZ family
PDJILDJI_00585 7.3e-56
PDJILDJI_00586 1.2e-10 S Protein of unknown function (DUF4044)
PDJILDJI_00587 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PDJILDJI_00588 3.9e-95 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PDJILDJI_00589 3.7e-162 rrmA 2.1.1.187 H Methyltransferase
PDJILDJI_00590 2.3e-182 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PDJILDJI_00592 5.9e-114 L PFAM Integrase catalytic region
PDJILDJI_00593 3e-14 D nuclear chromosome segregation
PDJILDJI_00594 5.9e-114 L PFAM Integrase catalytic region
PDJILDJI_00595 8.1e-60 rfbX S Membrane protein involved in the export of O-antigen and teichoic acid
PDJILDJI_00596 2.7e-213 glf 5.4.99.9 M UDP-galactopyranose mutase
PDJILDJI_00597 3.9e-30
PDJILDJI_00598 3.2e-55 M Domain of unknown function (DUF4422)
PDJILDJI_00599 3e-95 M Glycosyltransferase, group 1 family protein
PDJILDJI_00600 2.9e-77 glfT1 1.1.1.133 S Glycosyltransferase like family 2
PDJILDJI_00601 4.7e-74 wceM M Glycosyltransferase like family 2
PDJILDJI_00602 2e-51 pglC M Bacterial sugar transferase
PDJILDJI_00603 7.5e-119 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PDJILDJI_00604 4.6e-144 epsB M biosynthesis protein
PDJILDJI_00605 1.4e-165 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PDJILDJI_00606 2.2e-69 K Transcriptional regulator, HxlR family
PDJILDJI_00607 7.6e-94
PDJILDJI_00608 2.5e-230 L transposase, IS605 OrfB family
PDJILDJI_00609 9.6e-61 L PFAM transposase IS200-family protein
PDJILDJI_00610 4e-28
PDJILDJI_00611 1.2e-105 K DNA-templated transcription, initiation
PDJILDJI_00612 1.7e-37
PDJILDJI_00613 5.9e-114 L PFAM Integrase catalytic region
PDJILDJI_00614 5.9e-114 L PFAM Integrase catalytic region
PDJILDJI_00615 4e-182 M LPXTG-motif cell wall anchor domain protein
PDJILDJI_00616 0.0 M LPXTG-motif cell wall anchor domain protein
PDJILDJI_00617 1.1e-19 M LPXTG-motif cell wall anchor domain protein
PDJILDJI_00618 4.8e-12 sraP UW domain, Protein
PDJILDJI_00621 5.9e-114 L PFAM Integrase catalytic region
PDJILDJI_00622 1e-201 xerS L Belongs to the 'phage' integrase family
PDJILDJI_00624 6.6e-72 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PDJILDJI_00625 4.2e-77 marR K Transcriptional regulator, MarR family
PDJILDJI_00626 1.9e-178 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PDJILDJI_00627 6.5e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PDJILDJI_00628 3.3e-164 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
PDJILDJI_00629 1.3e-131 IQ reductase
PDJILDJI_00630 1.2e-225 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PDJILDJI_00631 5.8e-74 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PDJILDJI_00632 1.9e-74 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PDJILDJI_00633 3e-259 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
PDJILDJI_00634 5.5e-142 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PDJILDJI_00635 1.1e-136 accA 2.1.3.15, 6.4.1.2 I alpha subunit
PDJILDJI_00636 1.1e-130 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
PDJILDJI_00641 1e-135 L Transposase
PDJILDJI_00642 5.3e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDJILDJI_00643 3.3e-118 udk 2.7.1.48 F Cytidine monophosphokinase
PDJILDJI_00644 5.6e-115 rlpA M PFAM NLP P60 protein
PDJILDJI_00645 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDJILDJI_00646 6.6e-198 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PDJILDJI_00647 2e-58 yodB K Transcriptional regulator, HxlR family
PDJILDJI_00648 3.1e-92 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
PDJILDJI_00649 9.1e-144 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDJILDJI_00650 7e-46 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PDJILDJI_00651 5.9e-169 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PDJILDJI_00652 8.7e-69 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PDJILDJI_00653 4.4e-231 V MatE
PDJILDJI_00654 1.3e-266 yjeM E Amino Acid
PDJILDJI_00655 1e-135 L Transposase
PDJILDJI_00656 1.6e-179 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PDJILDJI_00657 1.4e-197 XK27_09615 S reductase
PDJILDJI_00658 4.9e-102 nqr 1.5.1.36 S reductase
PDJILDJI_00659 8.2e-268 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDJILDJI_00660 1.2e-189 1.3.5.4 C FAD binding domain
PDJILDJI_00661 1.6e-51 K LysR substrate binding domain
PDJILDJI_00662 1.1e-178 K Transcriptional regulator, LacI family
PDJILDJI_00663 4.7e-260 G Major Facilitator
PDJILDJI_00664 1e-204 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PDJILDJI_00665 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PDJILDJI_00666 4.5e-49 G Major Facilitator
PDJILDJI_00667 2.5e-187 G Major Facilitator
PDJILDJI_00668 0.0 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
PDJILDJI_00669 1.7e-270 M domain protein
PDJILDJI_00670 6.7e-260 tagE2 2.4.1.52 GT4 M Poly(Glycerol-phosphate) alpha-glucosyltransferase
PDJILDJI_00671 1.8e-268 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
PDJILDJI_00672 1.1e-71
PDJILDJI_00673 6.2e-76 K Transcriptional regulator, TetR family
PDJILDJI_00674 4.3e-13 K Transcriptional regulator, TetR family
PDJILDJI_00676 4.1e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PDJILDJI_00677 3e-86
PDJILDJI_00678 4e-253 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PDJILDJI_00679 2.5e-183 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PDJILDJI_00680 9.3e-261 nox C NADH oxidase
PDJILDJI_00681 1.1e-86 hmpT S ECF-type riboflavin transporter, S component
PDJILDJI_00682 0.0 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
PDJILDJI_00683 6.1e-48 1.14.12.17 S Cupin 2, conserved barrel domain protein
PDJILDJI_00684 3.8e-167 yvgN C Aldo keto reductase
PDJILDJI_00685 6.6e-136 puuD S peptidase C26
PDJILDJI_00686 8.1e-257 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
PDJILDJI_00687 1.6e-208 yfeO P Voltage gated chloride channel
PDJILDJI_00688 5.3e-226 sptS 2.7.13.3 T Histidine kinase
PDJILDJI_00689 2.1e-117 K response regulator
PDJILDJI_00690 1.7e-87 2.7.6.5 T Region found in RelA / SpoT proteins
PDJILDJI_00691 5.4e-121 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PDJILDJI_00692 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PDJILDJI_00693 1.1e-256 malT G Major Facilitator
PDJILDJI_00694 1.4e-113 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PDJILDJI_00696 1.1e-43 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PDJILDJI_00697 1.9e-292 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PDJILDJI_00698 8.2e-82 S YbaK proline--tRNA ligase associated domain protein
PDJILDJI_00699 3.6e-304 ybeC E amino acid
PDJILDJI_00700 0.0 ydaO E amino acid
PDJILDJI_00701 1.2e-39
PDJILDJI_00702 7.4e-68 rmaI K Transcriptional regulator
PDJILDJI_00703 1.7e-159 spoU 2.1.1.185 J Methyltransferase
PDJILDJI_00704 1.4e-223 oxlT P Major Facilitator Superfamily
PDJILDJI_00705 5.9e-114 L PFAM Integrase catalytic region
PDJILDJI_00706 9.6e-139 L hmm pf00665
PDJILDJI_00707 7.9e-95 L Helix-turn-helix domain
PDJILDJI_00708 2.6e-261 araP U Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
PDJILDJI_00709 0.0 araB 2.7.1.12, 2.7.1.16 G carbohydrate kinase FGGY
PDJILDJI_00710 1.8e-138 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
PDJILDJI_00711 4.4e-285 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
PDJILDJI_00712 1.1e-93 maa 2.3.1.79 S Maltose O-acetyltransferase
PDJILDJI_00713 1.5e-39 ykuJ S Protein of unknown function (DUF1797)
PDJILDJI_00714 2.5e-178 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PDJILDJI_00715 7.2e-197 cpoA GT4 M Glycosyltransferase, group 1 family protein
PDJILDJI_00716 1.4e-226 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
PDJILDJI_00717 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PDJILDJI_00718 2.7e-39 ptsH G phosphocarrier protein HPR
PDJILDJI_00719 2.9e-27
PDJILDJI_00720 0.0 clpE O Belongs to the ClpA ClpB family
PDJILDJI_00721 2.4e-99 S Pfam:DUF3816
PDJILDJI_00722 8e-142 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G MucBP domain
PDJILDJI_00723 6.7e-114
PDJILDJI_00724 1.8e-153 V ABC transporter, ATP-binding protein
PDJILDJI_00725 1e-63 gntR1 K Transcriptional regulator, GntR family
PDJILDJI_00726 1.7e-254 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PDJILDJI_00727 7.3e-259 ganB 3.2.1.89 G arabinogalactan
PDJILDJI_00728 1.7e-254 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PDJILDJI_00729 3.2e-200 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PDJILDJI_00730 1.5e-25
PDJILDJI_00731 7.1e-264 S Uncharacterized protein conserved in bacteria (DUF2252)
PDJILDJI_00732 7.2e-169 L transposase, IS605 OrfB family
PDJILDJI_00733 9.4e-295 L PFAM plasmid pRiA4b ORF-3 family protein
PDJILDJI_00734 1.1e-205 adhA 1.1.1.1 C Zinc-binding alcohol dehydrogenase family protein
PDJILDJI_00735 1e-110 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PDJILDJI_00736 1.9e-161 mleR K LysR family
PDJILDJI_00737 1.5e-305 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
PDJILDJI_00738 4.7e-260 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PDJILDJI_00739 1.8e-267 frdC 1.3.5.4 C FAD binding domain
PDJILDJI_00740 1.3e-252 yflS P Sodium:sulfate symporter transmembrane region
PDJILDJI_00741 1e-159 mleR K LysR family
PDJILDJI_00742 8.8e-251 yjjP S Putative threonine/serine exporter
PDJILDJI_00743 5e-119 ung2 3.2.2.27 L Uracil-DNA glycosylase
PDJILDJI_00744 8.5e-282 emrY EGP Major facilitator Superfamily
PDJILDJI_00745 3.4e-188 I Alpha beta
PDJILDJI_00746 4e-104 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
PDJILDJI_00747 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PDJILDJI_00749 4.6e-160 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PDJILDJI_00750 9.5e-119 S Domain of unknown function (DUF4811)
PDJILDJI_00751 1e-268 lmrB EGP Major facilitator Superfamily
PDJILDJI_00752 2.6e-74 merR K MerR HTH family regulatory protein
PDJILDJI_00753 2.9e-57
PDJILDJI_00754 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PDJILDJI_00755 7.3e-217 S CAAX protease self-immunity
PDJILDJI_00756 1.2e-107 glnP P ABC transporter permease
PDJILDJI_00757 4.2e-110 gluC P ABC transporter permease
PDJILDJI_00758 4.8e-151 glnH ET ABC transporter
PDJILDJI_00759 1.4e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDJILDJI_00760 5.5e-83 usp1 T Belongs to the universal stress protein A family
PDJILDJI_00761 8.4e-109 S VIT family
PDJILDJI_00762 1.6e-115 S membrane
PDJILDJI_00763 6.5e-165 czcD P cation diffusion facilitator family transporter
PDJILDJI_00764 1.1e-124 sirR K iron dependent repressor
PDJILDJI_00765 3.5e-31 cspC K Cold shock protein
PDJILDJI_00766 3.6e-129 thrE S Putative threonine/serine exporter
PDJILDJI_00767 6.7e-81 S Threonine/Serine exporter, ThrE
PDJILDJI_00768 2.7e-120 lssY 3.6.1.27 I phosphatase
PDJILDJI_00769 8.6e-09 2.3.1.128 J Acetyltransferase (GNAT) domain
PDJILDJI_00770 1.5e-275 lysP E amino acid
PDJILDJI_00771 4.3e-115 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PDJILDJI_00777 1.8e-128 L Helix-turn-helix domain
PDJILDJI_00778 1.5e-157 L hmm pf00665
PDJILDJI_00779 1.7e-254 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PDJILDJI_00780 7.1e-158 ytbE 1.1.1.346 S Aldo keto reductase
PDJILDJI_00781 5.3e-206 araR K Transcriptional regulator
PDJILDJI_00782 4.3e-83 usp6 T universal stress protein
PDJILDJI_00783 4.4e-46
PDJILDJI_00784 1.7e-235 rarA L recombination factor protein RarA
PDJILDJI_00785 9.3e-86 yueI S Protein of unknown function (DUF1694)
PDJILDJI_00786 1.5e-21
PDJILDJI_00787 8.1e-75 4.4.1.5 E Glyoxalase
PDJILDJI_00788 2.5e-138 S Membrane
PDJILDJI_00789 2.5e-135 S Belongs to the UPF0246 family
PDJILDJI_00790 0.0 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
PDJILDJI_00791 1.6e-260 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PDJILDJI_00792 1.1e-150 pbuG S permease
PDJILDJI_00793 1.2e-71 pbuG S permease
PDJILDJI_00794 1e-135 L Transposase
PDJILDJI_00795 7.7e-277 arlS 2.7.13.3 T Histidine kinase
PDJILDJI_00796 1.5e-121 K response regulator
PDJILDJI_00797 1.1e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PDJILDJI_00798 2.9e-99 yceD S Uncharacterized ACR, COG1399
PDJILDJI_00799 2.1e-213 ylbM S Belongs to the UPF0348 family
PDJILDJI_00800 1.7e-139 yqeM Q Methyltransferase
PDJILDJI_00801 4.9e-60 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PDJILDJI_00802 1e-113 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PDJILDJI_00803 5.6e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PDJILDJI_00804 1.9e-47 yhbY J RNA-binding protein
PDJILDJI_00805 2.1e-218 yqeH S Ribosome biogenesis GTPase YqeH
PDJILDJI_00806 1.8e-95 yqeG S HAD phosphatase, family IIIA
PDJILDJI_00807 1.6e-55 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PDJILDJI_00808 2.3e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PDJILDJI_00809 3.7e-85 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PDJILDJI_00810 5.3e-170 dnaI L Primosomal protein DnaI
PDJILDJI_00811 1.4e-203 dnaB L replication initiation and membrane attachment
PDJILDJI_00812 1.1e-80 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PDJILDJI_00813 4.8e-100 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PDJILDJI_00814 7.4e-160 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PDJILDJI_00815 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PDJILDJI_00816 4.1e-116 yoaK S Protein of unknown function (DUF1275)
PDJILDJI_00817 1.9e-119 ybhL S Belongs to the BI1 family
PDJILDJI_00818 1.9e-250 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PDJILDJI_00819 1.3e-21 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PDJILDJI_00820 7e-48 yafQ S Bacterial toxin of type II toxin-antitoxin system, YafQ
PDJILDJI_00821 2.5e-118 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PDJILDJI_00822 1.7e-56 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PDJILDJI_00823 7.5e-58 ytzB S Small secreted protein
PDJILDJI_00824 9.1e-167 glsA 3.5.1.2 E Belongs to the glutaminase family
PDJILDJI_00825 8.8e-184 iolS C Aldo keto reductase
PDJILDJI_00826 8.6e-81 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
PDJILDJI_00827 2.3e-145 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
PDJILDJI_00828 3.4e-253 2.1.1.72, 3.1.21.3 AA10,CBM73 L Belongs to the N(4) N(6)-methyltransferase family
PDJILDJI_00829 1.1e-65 2.1.1.72, 3.1.21.3 AA10,CBM73 L Belongs to the N(4) N(6)-methyltransferase family
PDJILDJI_00830 7.7e-27 S YSIRK type signal peptide
PDJILDJI_00831 1.1e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PDJILDJI_00832 5.1e-218 ecsB U ABC transporter
PDJILDJI_00833 1.5e-135 ecsA V ABC transporter, ATP-binding protein
PDJILDJI_00834 1.2e-76 hit FG histidine triad
PDJILDJI_00836 5e-128 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PDJILDJI_00837 0.0 L AAA domain
PDJILDJI_00838 1.8e-220 yhaO L Ser Thr phosphatase family protein
PDJILDJI_00839 3.5e-40 yheA S Belongs to the UPF0342 family
PDJILDJI_00840 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PDJILDJI_00841 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PDJILDJI_00842 7.3e-152 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PDJILDJI_00843 3.5e-166 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PDJILDJI_00845 7.4e-40
PDJILDJI_00846 1.8e-43
PDJILDJI_00847 6e-216 folP 2.5.1.15 H dihydropteroate synthase
PDJILDJI_00848 2.8e-105 xtp 2.5.1.15, 3.6.1.66 F Ham1 family
PDJILDJI_00849 4.5e-225 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PDJILDJI_00850 1.1e-104 folE 2.7.6.3, 3.5.4.16 F GTP cyclohydrolase 1
PDJILDJI_00851 5.2e-87 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
PDJILDJI_00852 2.2e-54 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PDJILDJI_00854 1.9e-43
PDJILDJI_00855 4.5e-112 S CAAX protease self-immunity
PDJILDJI_00856 2.1e-32
PDJILDJI_00857 4.4e-161 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PDJILDJI_00858 1.6e-185 rbsR K Periplasmic binding proteins and sugar binding domain of LacI family
PDJILDJI_00859 3.8e-113
PDJILDJI_00860 5e-116 dck 2.7.1.74 F deoxynucleoside kinase
PDJILDJI_00861 3.2e-176 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PDJILDJI_00862 1.2e-85 uspA T Belongs to the universal stress protein A family
PDJILDJI_00863 5.6e-277 pepV 3.5.1.18 E dipeptidase PepV
PDJILDJI_00864 2.2e-151 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PDJILDJI_00865 4.1e-303 ytgP S Polysaccharide biosynthesis protein
PDJILDJI_00866 4.9e-41
PDJILDJI_00867 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDJILDJI_00868 5.6e-217 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PDJILDJI_00869 9.6e-92 tag 3.2.2.20 L glycosylase
PDJILDJI_00870 6.9e-254 EGP Major facilitator Superfamily
PDJILDJI_00871 4.3e-85 perR P Belongs to the Fur family
PDJILDJI_00872 4.5e-231 cycA E Amino acid permease
PDJILDJI_00873 7.5e-103 V VanZ like family
PDJILDJI_00874 1e-23
PDJILDJI_00875 3.8e-85 S Short repeat of unknown function (DUF308)
PDJILDJI_00876 4.5e-79 S Psort location Cytoplasmic, score
PDJILDJI_00877 1.2e-277 dinB 2.7.7.7 L impB/mucB/samB family C-terminal domain
PDJILDJI_00878 2.9e-75 hsp O Belongs to the small heat shock protein (HSP20) family
PDJILDJI_00879 3.8e-151 yeaE S Aldo keto
PDJILDJI_00880 2e-236 preA 1.3.1.1 C 4Fe-4S dicluster domain
PDJILDJI_00881 9.5e-236 preT 1.3.1.1 E Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
PDJILDJI_00882 7.1e-149 xth 3.1.11.2 L exodeoxyribonuclease III
PDJILDJI_00883 2.3e-93 lytE M LysM domain protein
PDJILDJI_00884 0.0 oppD EP Psort location Cytoplasmic, score
PDJILDJI_00885 1.6e-42 lytE M LysM domain protein
PDJILDJI_00886 4.4e-158 sufD O Uncharacterized protein family (UPF0051)
PDJILDJI_00887 2e-111 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PDJILDJI_00888 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PDJILDJI_00889 8.5e-233 lmrB EGP Major facilitator Superfamily
PDJILDJI_00890 1.3e-96 2.3.1.128 K Acetyltransferase (GNAT) domain
PDJILDJI_00891 8.7e-190 L Transposase
PDJILDJI_00892 8.2e-60 M Peptidase_C39 like family
PDJILDJI_00893 1.6e-108 S Peptidase, M23
PDJILDJI_00894 2.3e-162
PDJILDJI_00895 2.9e-159 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
PDJILDJI_00896 2.8e-170 S AI-2E family transporter
PDJILDJI_00897 4.2e-135 XK27_07210 6.1.1.6 S B3 4 domain
PDJILDJI_00898 2.3e-78 yybA 2.3.1.57 K Transcriptional regulator
PDJILDJI_00899 3.6e-91 M1-874 K Domain of unknown function (DUF1836)
PDJILDJI_00900 1.8e-87 GM epimerase
PDJILDJI_00901 1.7e-154 ypdB V (ABC) transporter
PDJILDJI_00902 6.2e-241 yhdP S Transporter associated domain
PDJILDJI_00903 9.9e-85 nrdI F Belongs to the NrdI family
PDJILDJI_00904 3.2e-74 S 3-demethylubiquinone-9 3-methyltransferase
PDJILDJI_00905 3.1e-193 yeaN P Transporter, major facilitator family protein
PDJILDJI_00906 2.2e-287 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PDJILDJI_00907 3.2e-275 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PDJILDJI_00908 5.5e-28
PDJILDJI_00909 3.7e-210 L Belongs to the 'phage' integrase family
PDJILDJI_00910 7.7e-49
PDJILDJI_00911 1e-38
PDJILDJI_00912 5.4e-09
PDJILDJI_00915 2.8e-07
PDJILDJI_00916 4.6e-70 S Pfam:DUF955
PDJILDJI_00917 4.4e-26 3.4.21.88 K Helix-turn-helix domain
PDJILDJI_00922 6.2e-18
PDJILDJI_00925 1.8e-14 K Cro/C1-type HTH DNA-binding domain
PDJILDJI_00936 5.5e-79 recT L RecT family
PDJILDJI_00937 1.1e-57 pi112 3.6.4.12 L PDDEXK-like domain of unknown function (DUF3799)
PDJILDJI_00938 1.9e-121 L Psort location Cytoplasmic, score
PDJILDJI_00939 1.7e-54
PDJILDJI_00942 2.1e-51 S ORF6C domain
PDJILDJI_00948 2.6e-16
PDJILDJI_00949 1.8e-61 rusA L Endodeoxyribonuclease RusA
PDJILDJI_00952 2.5e-07
PDJILDJI_00953 6.6e-37
PDJILDJI_00958 3.5e-69 S Domain of unknown function (DUF4417)
PDJILDJI_00961 2.3e-119 xtmA L Terminase small subunit
PDJILDJI_00962 4.1e-218 S Terminase-like family
PDJILDJI_00963 5.5e-214 S Phage portal protein, SPP1 Gp6-like
PDJILDJI_00964 8.1e-151 S Phage Mu protein F like protein
PDJILDJI_00965 1.5e-51 S Domain of unknown function (DUF4355)
PDJILDJI_00966 4.2e-54
PDJILDJI_00967 1.6e-167 S Phage major capsid protein E
PDJILDJI_00968 3.6e-35
PDJILDJI_00969 1.2e-58
PDJILDJI_00970 6.2e-78
PDJILDJI_00971 3e-44
PDJILDJI_00972 5.9e-72 S Phage tail tube protein, TTP
PDJILDJI_00973 3.4e-57
PDJILDJI_00974 6.8e-33
PDJILDJI_00975 0.0 M Phage tail tape measure protein TP901
PDJILDJI_00976 8.4e-52
PDJILDJI_00977 6.5e-278 GT2,GT4 LM gp58-like protein
PDJILDJI_00978 1.5e-157 L hmm pf00665
PDJILDJI_00979 1.7e-128 L Helix-turn-helix domain
PDJILDJI_00980 5.1e-49 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PDJILDJI_00981 2.7e-117 gph 3.1.3.18 S HAD hydrolase, family IA, variant
PDJILDJI_00982 2.8e-255 yagE E amino acid
PDJILDJI_00983 3.4e-85 dps P Belongs to the Dps family
PDJILDJI_00984 0.0 pacL 3.6.3.8 P P-type ATPase
PDJILDJI_00985 1.1e-177 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
PDJILDJI_00986 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PDJILDJI_00987 2e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PDJILDJI_00988 4.5e-146 potB P ABC transporter permease
PDJILDJI_00989 4.9e-140 potC P ABC transporter permease
PDJILDJI_00990 4.3e-208 potD P ABC transporter
PDJILDJI_00991 8.1e-230
PDJILDJI_00992 7.2e-234 EGP Sugar (and other) transporter
PDJILDJI_00993 3e-254 yfnA E Amino Acid
PDJILDJI_00994 1.2e-73 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
PDJILDJI_00995 1.2e-100 gmk2 2.7.4.8 F Guanylate kinase
PDJILDJI_00996 1.5e-82 zur P Belongs to the Fur family
PDJILDJI_00997 4e-17 3.2.1.14 GH18
PDJILDJI_00998 2.2e-151
PDJILDJI_00999 5.8e-39 pspC KT PspC domain protein
PDJILDJI_01000 1.6e-94 K Transcriptional regulator (TetR family)
PDJILDJI_01001 3.2e-226 V domain protein
PDJILDJI_01002 7.6e-183 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDJILDJI_01004 6.6e-35 S Transglycosylase associated protein
PDJILDJI_01005 7.5e-228 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PDJILDJI_01006 4.2e-126 3.1.3.73 G phosphoglycerate mutase
PDJILDJI_01007 1.2e-115 dedA S SNARE associated Golgi protein
PDJILDJI_01008 0.0 helD 3.6.4.12 L DNA helicase
PDJILDJI_01009 2.8e-36 Q pyridine nucleotide-disulphide oxidoreductase
PDJILDJI_01010 4.7e-157 EG EamA-like transporter family
PDJILDJI_01011 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PDJILDJI_01012 4.8e-176 coaA 2.7.1.33 F Pantothenic acid kinase
PDJILDJI_01013 1.5e-225 S cog cog1373
PDJILDJI_01015 8.7e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PDJILDJI_01016 1.5e-157 L hmm pf00665
PDJILDJI_01017 1.8e-128 L Helix-turn-helix domain
PDJILDJI_01018 3.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PDJILDJI_01019 2.2e-230 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PDJILDJI_01020 1.3e-215 iscS2 2.8.1.7 E Aminotransferase class V
PDJILDJI_01021 8.5e-229 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PDJILDJI_01022 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PDJILDJI_01023 1.9e-272 cydA 1.10.3.14 C ubiquinol oxidase
PDJILDJI_01024 1.1e-184 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
PDJILDJI_01025 2.8e-310 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PDJILDJI_01026 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PDJILDJI_01027 7.6e-230 ndh 1.6.99.3 C NADH dehydrogenase
PDJILDJI_01028 4.8e-246 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PDJILDJI_01029 6.8e-121 radC L DNA repair protein
PDJILDJI_01030 1.7e-179 mreB D cell shape determining protein MreB
PDJILDJI_01031 2.2e-151 mreC M Involved in formation and maintenance of cell shape
PDJILDJI_01032 1.2e-91 mreD M rod shape-determining protein MreD
PDJILDJI_01033 3.2e-102 glnP P ABC transporter permease
PDJILDJI_01034 1.6e-117 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDJILDJI_01035 2.6e-160 aatB ET ABC transporter substrate-binding protein
PDJILDJI_01036 1.6e-230 ymfF S Peptidase M16 inactive domain protein
PDJILDJI_01037 9.3e-250 ymfH S Peptidase M16
PDJILDJI_01038 7.4e-141 ymfM S Helix-turn-helix domain
PDJILDJI_01039 2.5e-101 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PDJILDJI_01040 1.9e-228 cinA 3.5.1.42 S Belongs to the CinA family
PDJILDJI_01041 7.6e-197 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PDJILDJI_01042 1.7e-128 L Helix-turn-helix domain
PDJILDJI_01043 1.5e-157 L hmm pf00665
PDJILDJI_01044 5.3e-130 S Hydrolases of the alpha beta superfamily
PDJILDJI_01045 1.3e-16 S Hydrolases of the alpha beta superfamily
PDJILDJI_01046 1.2e-196 adhP 1.1.1.1 C alcohol dehydrogenase
PDJILDJI_01047 3.4e-77 ctsR K Belongs to the CtsR family
PDJILDJI_01048 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PDJILDJI_01049 1e-110 K Bacterial regulatory proteins, tetR family
PDJILDJI_01050 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDJILDJI_01051 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDJILDJI_01052 1.6e-200 ykiI
PDJILDJI_01053 1.5e-118 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
PDJILDJI_01054 3.9e-72 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PDJILDJI_01055 2.4e-83 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PDJILDJI_01056 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PDJILDJI_01057 1.7e-133 K Transcriptional regulatory protein, C-terminal domain protein
PDJILDJI_01058 2.5e-158 pstS P Phosphate
PDJILDJI_01059 2.8e-152 pstC P probably responsible for the translocation of the substrate across the membrane
PDJILDJI_01060 3.6e-152 pstA P Phosphate transport system permease protein PstA
PDJILDJI_01061 8.9e-136 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PDJILDJI_01062 1.9e-124 phoU P Plays a role in the regulation of phosphate uptake
PDJILDJI_01063 2.1e-141
PDJILDJI_01064 6.7e-44 ydaM M Glycosyl transferase
PDJILDJI_01065 1.1e-181 ydaM M Glycosyl transferase
PDJILDJI_01066 7.4e-219 G Glycosyl hydrolases family 8
PDJILDJI_01067 3.9e-139 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PDJILDJI_01068 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
PDJILDJI_01069 1.7e-238 ktrB P Potassium uptake protein
PDJILDJI_01070 1.4e-116 ktrA P domain protein
PDJILDJI_01071 1.2e-81 Q Methyltransferase
PDJILDJI_01072 8.2e-230 mntH P H( )-stimulated, divalent metal cation uptake system
PDJILDJI_01073 5.7e-82 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
PDJILDJI_01074 2.6e-68 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
PDJILDJI_01075 7.4e-169 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PDJILDJI_01076 1.3e-96 S NADPH-dependent FMN reductase
PDJILDJI_01077 6.1e-216 G Belongs to the glycosyl hydrolase family 6
PDJILDJI_01078 6.1e-180 MA20_14895 S Conserved hypothetical protein 698
PDJILDJI_01079 3.5e-134 I alpha/beta hydrolase fold
PDJILDJI_01080 1e-54 lsa S ABC transporter
PDJILDJI_01081 1.2e-82 lsa S ABC transporter
PDJILDJI_01082 8.7e-116 lssY 3.6.1.27 I Acid phosphatase homologues
PDJILDJI_01083 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PDJILDJI_01084 4.2e-231 clcA_2 P Chloride transporter, ClC family
PDJILDJI_01085 7.2e-118 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PDJILDJI_01086 4.8e-151 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PDJILDJI_01087 4e-142 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PDJILDJI_01088 1.6e-51
PDJILDJI_01089 0.0 S SEC-C Motif Domain Protein
PDJILDJI_01091 1.8e-240 yhjE EGP MFS transporter, metabolite H symporter (MHS) family protein
PDJILDJI_01092 1.2e-129 IQ Dehydrogenase reductase
PDJILDJI_01093 2.9e-37
PDJILDJI_01094 2.2e-114 ywnB S NAD(P)H-binding
PDJILDJI_01095 1.2e-38 S Cytochrome b5-like Heme/Steroid binding domain
PDJILDJI_01096 2e-74 nhaC C Na H antiporter NhaC
PDJILDJI_01097 3.5e-149 nhaC C Na H antiporter NhaC
PDJILDJI_01098 7.7e-183 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PDJILDJI_01100 7.9e-102 ydeN S Serine hydrolase
PDJILDJI_01101 4.5e-62 psiE S Phosphate-starvation-inducible E
PDJILDJI_01102 5e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PDJILDJI_01104 2.6e-177 S Aldo keto reductase
PDJILDJI_01105 9.9e-75 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I PAP2 superfamily
PDJILDJI_01106 0.0 L Helicase C-terminal domain protein
PDJILDJI_01108 3.2e-253 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
PDJILDJI_01109 3.3e-55 S Sugar efflux transporter for intercellular exchange
PDJILDJI_01110 2.1e-126
PDJILDJI_01111 8.2e-110 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
PDJILDJI_01112 0.0 cadA P P-type ATPase
PDJILDJI_01113 3.3e-217 5.4.2.7 G Metalloenzyme superfamily
PDJILDJI_01115 4.8e-154 1.6.5.2 GM NAD(P)H-binding
PDJILDJI_01116 9e-75 K Transcriptional regulator
PDJILDJI_01117 2.3e-162 proX M ABC transporter, substrate-binding protein, QAT family
PDJILDJI_01118 6.3e-109 proWZ P ABC transporter permease
PDJILDJI_01119 6.7e-139 proV E ABC transporter, ATP-binding protein
PDJILDJI_01120 4.5e-104 proW P ABC transporter, permease protein
PDJILDJI_01121 6.9e-77 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PDJILDJI_01122 1.2e-252 clcA P chloride
PDJILDJI_01123 5.7e-219 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PDJILDJI_01124 3.1e-103 metI P ABC transporter permease
PDJILDJI_01125 4.2e-192 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PDJILDJI_01126 2.8e-154 metQ1 P Belongs to the nlpA lipoprotein family
PDJILDJI_01127 3.6e-121 scrR3 K Transcriptional regulator, LacI family
PDJILDJI_01128 4e-156 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PDJILDJI_01129 2.6e-42 S Sugar efflux transporter for intercellular exchange
PDJILDJI_01130 2.3e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PDJILDJI_01131 1.3e-221 norA EGP Major facilitator Superfamily
PDJILDJI_01132 1.9e-43 1.3.5.4 S FMN binding
PDJILDJI_01133 8.4e-119 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PDJILDJI_01134 1.8e-265 yfnA E amino acid
PDJILDJI_01135 3.1e-256 gabT 2.6.1.19 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PDJILDJI_01137 3.1e-204 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PDJILDJI_01138 0.0 helD 3.6.4.12 L DNA helicase
PDJILDJI_01139 6.3e-81 ndk 2.7.4.6 F Belongs to the NDK family
PDJILDJI_01148 2.2e-12
PDJILDJI_01163 3.4e-29 L Psort location Cytoplasmic, score
PDJILDJI_01171 7.6e-12 S protein disulfide oxidoreductase activity
PDJILDJI_01172 1.6e-10 E Zn peptidase
PDJILDJI_01173 6.6e-77 L Belongs to the 'phage' integrase family
PDJILDJI_01175 3e-78 S Fic/DOC family
PDJILDJI_01178 1.3e-30
PDJILDJI_01181 1.4e-07 V CAAX protease self-immunity
PDJILDJI_01184 2.2e-51 trwN GH23 M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
PDJILDJI_01186 1.3e-194 U type IV secretory pathway VirB4
PDJILDJI_01187 2.9e-29
PDJILDJI_01189 1.2e-68
PDJILDJI_01190 1e-232 U TraM recognition site of TraD and TraG
PDJILDJI_01195 6.7e-145 clpB O Belongs to the ClpA ClpB family
PDJILDJI_01198 1.1e-148 topA2 5.99.1.2 G Topoisomerase IA
PDJILDJI_01199 2.1e-51 L Protein of unknown function (DUF3991)
PDJILDJI_01200 1e-08 nrdH O Glutaredoxin-like protein NrdH
PDJILDJI_01203 7.9e-16 K ORF6N domain
PDJILDJI_01204 5.8e-32 XK27_00515 D Glucan-binding protein C
PDJILDJI_01205 1.3e-157 S Polyphosphate nucleotide phosphotransferase, PPK2 family
PDJILDJI_01206 3.7e-54
PDJILDJI_01207 9.9e-206 yttB EGP Major facilitator Superfamily
PDJILDJI_01208 1.5e-234 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PDJILDJI_01209 2e-74 rplI J Binds to the 23S rRNA
PDJILDJI_01210 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PDJILDJI_01211 1.6e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PDJILDJI_01212 1.7e-78 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PDJILDJI_01213 1.2e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
PDJILDJI_01214 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDJILDJI_01215 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PDJILDJI_01216 1.2e-205 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PDJILDJI_01217 1.7e-34 yaaA S S4 domain protein YaaA
PDJILDJI_01218 6.7e-10 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
PDJILDJI_01219 1.6e-81 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
PDJILDJI_01220 3.2e-206 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PDJILDJI_01221 6.5e-251 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PDJILDJI_01222 3.4e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PDJILDJI_01223 2e-58 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PDJILDJI_01224 4.5e-130 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PDJILDJI_01225 9.7e-130 jag S R3H domain protein
PDJILDJI_01226 1.3e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PDJILDJI_01227 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PDJILDJI_01228 0.0 asnB 6.3.5.4 E Asparagine synthase
PDJILDJI_01229 5.3e-292 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PDJILDJI_01230 1.9e-247 yxbA 6.3.1.12 S ATP-grasp enzyme
PDJILDJI_01231 1.7e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PDJILDJI_01232 9.1e-89 2.3.1.183 M Acetyltransferase GNAT family
PDJILDJI_01233 1.8e-161 S reductase
PDJILDJI_01235 3.6e-288 S amidohydrolase
PDJILDJI_01236 1.6e-260 K Aminotransferase class I and II
PDJILDJI_01237 7.5e-83 azlC E azaleucine resistance protein AzlC
PDJILDJI_01238 7.1e-50 azlD E Branched-chain amino acid transport
PDJILDJI_01239 5.5e-118 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
PDJILDJI_01241 2.7e-70 S GyrI-like small molecule binding domain
PDJILDJI_01242 6.4e-39 S GyrI-like small molecule binding domain
PDJILDJI_01243 5e-122 yhiD S MgtC family
PDJILDJI_01244 3.9e-93 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PDJILDJI_01245 5.9e-191 V Beta-lactamase
PDJILDJI_01247 4.4e-100 L Helix-turn-helix domain
PDJILDJI_01248 5.5e-183 hpaIM 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
PDJILDJI_01249 1.3e-190 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDJILDJI_01250 1.8e-165 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PDJILDJI_01251 6.1e-222 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PDJILDJI_01252 1.6e-177
PDJILDJI_01253 1e-130 cobB K SIR2 family
PDJILDJI_01255 3.6e-162 yunF F Protein of unknown function DUF72
PDJILDJI_01256 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PDJILDJI_01257 1.9e-155 tatD L hydrolase, TatD family
PDJILDJI_01258 3.2e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PDJILDJI_01259 5.2e-159 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PDJILDJI_01260 6.8e-37 veg S Biofilm formation stimulator VEG
PDJILDJI_01261 4.9e-159 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PDJILDJI_01262 8.2e-168 znuA P Belongs to the bacterial solute-binding protein 9 family
PDJILDJI_01263 1.4e-121 fhuC P ABC transporter
PDJILDJI_01264 1.4e-118 znuB U ABC 3 transport family
PDJILDJI_01265 2.6e-149 purR 2.4.2.7 F pur operon repressor
PDJILDJI_01266 7.5e-242 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PDJILDJI_01267 1.1e-178 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PDJILDJI_01268 2.1e-49
PDJILDJI_01269 1.8e-145 yxeH S hydrolase
PDJILDJI_01270 5e-270 ywfO S HD domain protein
PDJILDJI_01271 7.9e-146 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
PDJILDJI_01272 3e-66 ywiB S Domain of unknown function (DUF1934)
PDJILDJI_01273 8.6e-51 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PDJILDJI_01274 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PDJILDJI_01275 5.9e-114 L PFAM Integrase catalytic region
PDJILDJI_01276 5.9e-114 L PFAM Integrase catalytic region
PDJILDJI_01277 1.6e-67 yqkB S Belongs to the HesB IscA family
PDJILDJI_01278 2.7e-49
PDJILDJI_01280 4.1e-89 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
PDJILDJI_01281 1.3e-61 asp S Asp23 family, cell envelope-related function
PDJILDJI_01282 2.1e-25
PDJILDJI_01283 3.2e-95
PDJILDJI_01284 7e-289 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
PDJILDJI_01285 9.9e-183 K Transcriptional regulator, LacI family
PDJILDJI_01286 1.9e-11 gntT EG Gluconate
PDJILDJI_01287 1.2e-201 gntT EG Gluconate
PDJILDJI_01288 1.1e-294 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
PDJILDJI_01289 2.9e-96 K Acetyltransferase (GNAT) domain
PDJILDJI_01290 5.4e-47
PDJILDJI_01291 2.4e-22
PDJILDJI_01292 2.2e-44
PDJILDJI_01293 1.8e-57 yhaI S Protein of unknown function (DUF805)
PDJILDJI_01294 2.8e-140 IQ reductase
PDJILDJI_01295 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
PDJILDJI_01296 5.3e-282 hsdM 2.1.1.72 V type I restriction-modification system
PDJILDJI_01297 1.9e-225 L Transposase IS66 family
PDJILDJI_01299 2.1e-88 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PDJILDJI_01300 2.4e-65 K HxlR-like helix-turn-helix
PDJILDJI_01301 8.5e-54 S macrophage migration inhibitory factor
PDJILDJI_01302 1.1e-50 yqiG C Oxidoreductase
PDJILDJI_01303 7.8e-20 yqiG C Oxidoreductase
PDJILDJI_01304 3.7e-91 yqiG C Oxidoreductase
PDJILDJI_01306 3.7e-19
PDJILDJI_01307 1.9e-262 dtpT U amino acid peptide transporter
PDJILDJI_01308 6.9e-15 yjjH S Calcineurin-like phosphoesterase
PDJILDJI_01309 1.9e-135 yjjH S Calcineurin-like phosphoesterase
PDJILDJI_01312 1.5e-115
PDJILDJI_01313 9.1e-251 EGP Major facilitator Superfamily
PDJILDJI_01314 9.5e-300 aspT P Predicted Permease Membrane Region
PDJILDJI_01315 1.4e-133 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PDJILDJI_01316 1.8e-127 gntR1 K UbiC transcription regulator-associated domain protein
PDJILDJI_01317 2.9e-284 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDJILDJI_01318 1.4e-153 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PDJILDJI_01319 0.0 yhgF K Tex-like protein N-terminal domain protein
PDJILDJI_01320 1.9e-85 ydcK S Belongs to the SprT family
PDJILDJI_01322 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PDJILDJI_01323 1.3e-184 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
PDJILDJI_01324 0.0 S Bacterial membrane protein, YfhO
PDJILDJI_01325 1.2e-134 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PDJILDJI_01326 3.1e-169 I alpha/beta hydrolase fold
PDJILDJI_01327 9.4e-214 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PDJILDJI_01328 2.4e-119 tcyB E ABC transporter
PDJILDJI_01329 6.3e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDJILDJI_01330 7.4e-141 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PDJILDJI_01331 5.1e-267 pepC 3.4.22.40 E Peptidase C1-like family
PDJILDJI_01332 2.6e-126 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PDJILDJI_01333 1.5e-49 HA62_12640 S GCN5-related N-acetyl-transferase
PDJILDJI_01334 2e-97 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
PDJILDJI_01335 2.3e-254 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PDJILDJI_01336 1.7e-207 yacL S domain protein
PDJILDJI_01337 1.7e-273 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PDJILDJI_01338 2.1e-70 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PDJILDJI_01339 2.3e-136 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PDJILDJI_01340 1.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PDJILDJI_01341 2.2e-16 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PDJILDJI_01342 1.7e-96 nusG K Participates in transcription elongation, termination and antitermination
PDJILDJI_01343 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PDJILDJI_01344 3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PDJILDJI_01345 1.1e-225 aadAT EK Aminotransferase, class I
PDJILDJI_01347 2.5e-247 M Glycosyl transferase family group 2
PDJILDJI_01348 9e-209 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PDJILDJI_01349 1.7e-82 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PDJILDJI_01350 3.2e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PDJILDJI_01351 1.5e-48
PDJILDJI_01353 2e-40 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PDJILDJI_01354 4e-56 K transcriptional regulator PadR family
PDJILDJI_01355 1.6e-82 XK27_06920 S Protein of unknown function (DUF1700)
PDJILDJI_01356 6.4e-126 S Putative adhesin
PDJILDJI_01357 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PDJILDJI_01358 3.4e-199 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDJILDJI_01359 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PDJILDJI_01360 3.4e-35 nrdH O Glutaredoxin
PDJILDJI_01361 3.5e-91 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PDJILDJI_01362 4.7e-300 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PDJILDJI_01363 7e-47 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PDJILDJI_01364 3.3e-109 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PDJILDJI_01365 9.7e-39 S Protein of unknown function (DUF2508)
PDJILDJI_01366 4.8e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PDJILDJI_01367 7.6e-52 yaaQ S Cyclic-di-AMP receptor
PDJILDJI_01368 2.8e-185 holB 2.7.7.7 L DNA polymerase III
PDJILDJI_01369 5.9e-58 yabA L Involved in initiation control of chromosome replication
PDJILDJI_01370 2e-155 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PDJILDJI_01371 1.5e-135 fat 3.1.2.21 I Acyl-ACP thioesterase
PDJILDJI_01372 8.5e-279 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PDJILDJI_01373 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PDJILDJI_01374 1.5e-172 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
PDJILDJI_01375 4.2e-194 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PDJILDJI_01376 2e-194 L Integrase core domain
PDJILDJI_01390 2.9e-18
PDJILDJI_01391 1.8e-55 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PDJILDJI_01393 4.8e-38 L helicase activity
PDJILDJI_01394 1.6e-25 L helicase activity
PDJILDJI_01395 1.6e-235 L Integrase core domain
PDJILDJI_01398 6.2e-208 rny S Endoribonuclease that initiates mRNA decay
PDJILDJI_01399 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PDJILDJI_01400 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PDJILDJI_01401 1.9e-101 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PDJILDJI_01402 3.4e-191 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PDJILDJI_01403 2.6e-189 tgt_1 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PDJILDJI_01404 2.8e-31 yajC U Preprotein translocase
PDJILDJI_01405 3.6e-182 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PDJILDJI_01406 3.7e-233 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PDJILDJI_01407 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PDJILDJI_01408 4.1e-43 yrzL S Belongs to the UPF0297 family
PDJILDJI_01409 3.6e-76 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PDJILDJI_01410 6.1e-48 yrzB S Belongs to the UPF0473 family
PDJILDJI_01411 1e-85 cvpA S Colicin V production protein
PDJILDJI_01412 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PDJILDJI_01413 6.1e-54 trxA O Belongs to the thioredoxin family
PDJILDJI_01414 1.3e-96 yslB S Protein of unknown function (DUF2507)
PDJILDJI_01415 2.1e-143 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PDJILDJI_01416 2.7e-103 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PDJILDJI_01417 4.4e-94 S Phosphoesterase
PDJILDJI_01418 3.6e-76 ykuL S (CBS) domain
PDJILDJI_01419 4.4e-152 3.1.3.102, 3.1.3.104, 3.1.3.23 S haloacid dehalogenase-like hydrolase
PDJILDJI_01420 3.4e-147 ykuT M mechanosensitive ion channel
PDJILDJI_01421 9.4e-37 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PDJILDJI_01422 3.5e-26
PDJILDJI_01423 1.2e-210 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PDJILDJI_01424 1.4e-181 ccpA K catabolite control protein A
PDJILDJI_01425 1.9e-134
PDJILDJI_01426 3.5e-132 yebC K Transcriptional regulatory protein
PDJILDJI_01427 1.7e-183 S Phosphotransferase system, EIIC
PDJILDJI_01428 7.1e-98 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PDJILDJI_01429 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
PDJILDJI_01430 7.9e-35 copZ C Heavy-metal-associated domain
PDJILDJI_01431 6.7e-93 dps P Belongs to the Dps family
PDJILDJI_01432 5.8e-112 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
PDJILDJI_01433 4.2e-111 3.6.1.13, 3.6.1.55 F NUDIX domain
PDJILDJI_01434 4e-230 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PDJILDJI_01435 5.6e-79 pncA Q Isochorismatase family
PDJILDJI_01436 7.9e-61 pldB 3.1.1.5 I Serine aminopeptidase, S33
PDJILDJI_01437 2.7e-26 K TRANSCRIPTIONal
PDJILDJI_01438 2.8e-57
PDJILDJI_01439 5.9e-177 prmA J Ribosomal protein L11 methyltransferase
PDJILDJI_01440 1.2e-129 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PDJILDJI_01441 1.2e-52
PDJILDJI_01442 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PDJILDJI_01443 8.4e-78 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PDJILDJI_01444 2.1e-165 yniA G Phosphotransferase enzyme family
PDJILDJI_01445 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PDJILDJI_01446 5.5e-75 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PDJILDJI_01447 8.7e-148 1.1.1.346 C Aldo keto reductase
PDJILDJI_01448 6.8e-139 K LysR substrate binding domain protein
PDJILDJI_01449 1.5e-80 C Flavodoxin
PDJILDJI_01450 7.5e-77 yphH S Cupin domain
PDJILDJI_01451 1.7e-73 yeaL S UPF0756 membrane protein
PDJILDJI_01452 6.9e-243 EGP Major facilitator Superfamily
PDJILDJI_01453 5e-75 copY K Copper transport repressor CopY TcrY
PDJILDJI_01454 8.5e-246 yhdP S Transporter associated domain
PDJILDJI_01455 0.0 ubiB S ABC1 family
PDJILDJI_01456 8.1e-143 S DUF218 domain
PDJILDJI_01457 8.3e-69 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PDJILDJI_01458 5.8e-59 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDJILDJI_01459 9.1e-56 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PDJILDJI_01460 0.0 uvrA3 L excinuclease ABC, A subunit
PDJILDJI_01461 4.6e-123 S SNARE associated Golgi protein
PDJILDJI_01462 1.3e-229 N Uncharacterized conserved protein (DUF2075)
PDJILDJI_01463 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PDJILDJI_01465 1e-254 yifK E Amino acid permease
PDJILDJI_01466 5.5e-158 endA V DNA/RNA non-specific endonuclease
PDJILDJI_01467 0.0 I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDJILDJI_01468 1.6e-236 EGP Major facilitator Superfamily
PDJILDJI_01469 2.9e-111 yvyE 3.4.13.9 S YigZ family
PDJILDJI_01470 6.8e-256 comFA L Helicase C-terminal domain protein
PDJILDJI_01471 1.2e-112 comFC S Competence protein
PDJILDJI_01472 3.8e-96 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PDJILDJI_01473 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PDJILDJI_01474 1.7e-187 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PDJILDJI_01475 3.1e-32 KT PspC domain protein
PDJILDJI_01476 4.9e-52 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
PDJILDJI_01477 1.7e-176 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PDJILDJI_01478 2.2e-156 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PDJILDJI_01479 1.8e-184 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PDJILDJI_01480 5.7e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PDJILDJI_01481 3.9e-136 yrjD S LUD domain
PDJILDJI_01482 7.5e-288 lutB C 4Fe-4S dicluster domain
PDJILDJI_01483 6.8e-158 lutA C Cysteine-rich domain
PDJILDJI_01484 5e-173 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PDJILDJI_01485 2.5e-217 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PDJILDJI_01486 1.3e-157 aatB ET PFAM extracellular solute-binding protein, family 3
PDJILDJI_01487 1.6e-88 ykhA 3.1.2.20 I Thioesterase superfamily
PDJILDJI_01488 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PDJILDJI_01489 2.3e-116 yfbR S HD containing hydrolase-like enzyme
PDJILDJI_01490 1.5e-13
PDJILDJI_01491 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PDJILDJI_01492 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PDJILDJI_01493 5.4e-245 steT E amino acid
PDJILDJI_01494 1.1e-161 rapZ S Displays ATPase and GTPase activities
PDJILDJI_01495 1.4e-186 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PDJILDJI_01496 4e-170 whiA K May be required for sporulation
PDJILDJI_01498 8.8e-15
PDJILDJI_01499 2.1e-103 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PDJILDJI_01501 1.1e-189 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PDJILDJI_01502 2.4e-228 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PDJILDJI_01503 4.8e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PDJILDJI_01504 4.2e-250 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PDJILDJI_01505 7.1e-248 yifK E Amino acid permease
PDJILDJI_01506 2.6e-291 clcA P chloride
PDJILDJI_01507 1.8e-34 secG U Preprotein translocase
PDJILDJI_01508 6.8e-147 est 3.1.1.1 S Serine aminopeptidase, S33
PDJILDJI_01509 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PDJILDJI_01510 1.4e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PDJILDJI_01511 6.3e-105 yxjI
PDJILDJI_01512 6.2e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PDJILDJI_01513 3.8e-179 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PDJILDJI_01514 2.9e-81 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PDJILDJI_01515 2.6e-86 K Acetyltransferase (GNAT) domain
PDJILDJI_01516 4.4e-76 S PAS domain
PDJILDJI_01517 2.7e-102 dnaQ 2.7.7.7 L DNA polymerase III
PDJILDJI_01518 3.6e-168 murB 1.3.1.98 M Cell wall formation
PDJILDJI_01519 2.7e-166 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PDJILDJI_01520 1.7e-66 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PDJILDJI_01521 6.1e-244 fucP G Major Facilitator Superfamily
PDJILDJI_01522 5e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PDJILDJI_01523 2e-126 ybbR S YbbR-like protein
PDJILDJI_01524 9.4e-253 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PDJILDJI_01525 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PDJILDJI_01526 8.7e-53
PDJILDJI_01527 0.0 oatA I Acyltransferase
PDJILDJI_01528 2.3e-81 K Transcriptional regulator
PDJILDJI_01529 2e-149 XK27_02985 S Cof-like hydrolase
PDJILDJI_01530 2.8e-79 lytE M Lysin motif
PDJILDJI_01532 1.5e-132 K response regulator
PDJILDJI_01533 6.8e-273 yclK 2.7.13.3 T Histidine kinase
PDJILDJI_01534 2.6e-155 glcU U sugar transport
PDJILDJI_01535 9e-94 lacA 2.3.1.79 S Transferase hexapeptide repeat
PDJILDJI_01536 1e-262 pgi 5.3.1.9 G Belongs to the GPI family
PDJILDJI_01537 1.3e-28
PDJILDJI_01538 5.6e-164 xylR GK ROK family
PDJILDJI_01539 1.8e-300 xylB 2.7.1.17 G Belongs to the FGGY kinase family
PDJILDJI_01540 8.1e-154 KT YcbB domain
PDJILDJI_01541 9.9e-191 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PDJILDJI_01542 4.3e-172 arcC 2.7.2.2 E Belongs to the carbamate kinase family
PDJILDJI_01543 3.3e-161 EG EamA-like transporter family
PDJILDJI_01544 4.5e-103 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
PDJILDJI_01545 2.5e-51 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PDJILDJI_01546 6.3e-50 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PDJILDJI_01547 0.0 copA 3.6.3.54 P P-type ATPase
PDJILDJI_01548 4.5e-85
PDJILDJI_01550 5.2e-56
PDJILDJI_01552 1e-73 yjcE P Sodium proton antiporter
PDJILDJI_01553 2.7e-158 yjcE P Sodium proton antiporter
PDJILDJI_01555 5.9e-91
PDJILDJI_01556 0.0 M domain protein
PDJILDJI_01557 1.9e-32
PDJILDJI_01558 3.9e-187 ampC V Beta-lactamase
PDJILDJI_01559 4.1e-239 arcA 3.5.3.6 E Arginine
PDJILDJI_01560 4.7e-79 argR K Regulates arginine biosynthesis genes
PDJILDJI_01561 2e-261 E Arginine ornithine antiporter
PDJILDJI_01562 2.7e-223 arcD U Amino acid permease
PDJILDJI_01563 3.2e-135 cobQ S CobB/CobQ-like glutamine amidotransferase domain
PDJILDJI_01564 4e-264 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain
PDJILDJI_01565 6e-108 tdk 2.7.1.21 F thymidine kinase
PDJILDJI_01566 1.2e-194 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PDJILDJI_01567 5.7e-163 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PDJILDJI_01568 1e-195 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PDJILDJI_01569 9.2e-231 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PDJILDJI_01570 6.6e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PDJILDJI_01571 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PDJILDJI_01572 9.9e-192 yibE S overlaps another CDS with the same product name
PDJILDJI_01573 6.3e-129 yibF S overlaps another CDS with the same product name
PDJILDJI_01574 2.5e-231 pyrP F Permease
PDJILDJI_01575 7.3e-124 atpB C it plays a direct role in the translocation of protons across the membrane
PDJILDJI_01576 1.5e-14 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDJILDJI_01577 1.1e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PDJILDJI_01578 6.7e-93 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PDJILDJI_01579 4e-284 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PDJILDJI_01580 1.9e-164 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PDJILDJI_01581 1.1e-267 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PDJILDJI_01582 1.6e-68 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PDJILDJI_01583 1.3e-33 ywzB S Protein of unknown function (DUF1146)
PDJILDJI_01584 2.1e-241 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PDJILDJI_01585 1.9e-178 mbl D Cell shape determining protein MreB Mrl
PDJILDJI_01586 1e-31 S Protein of unknown function (DUF2969)
PDJILDJI_01587 4.1e-220 rodA D Belongs to the SEDS family
PDJILDJI_01588 3.3e-46 gcvH E glycine cleavage
PDJILDJI_01589 5.3e-217 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PDJILDJI_01592 1.8e-76 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
PDJILDJI_01593 1.6e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PDJILDJI_01594 3.2e-121 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PDJILDJI_01595 2e-202 coiA 3.6.4.12 S Competence protein
PDJILDJI_01596 9.2e-264 pipD E Dipeptidase
PDJILDJI_01597 4.7e-114 yjbH Q Thioredoxin
PDJILDJI_01598 2e-115 yjbM 2.7.6.5 S RelA SpoT domain protein
PDJILDJI_01599 3e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PDJILDJI_01600 1.9e-172 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
PDJILDJI_01609 3.1e-77 L PFAM Integrase catalytic region
PDJILDJI_01610 3.5e-85 rfbX S Membrane protein involved in the export of O-antigen and teichoic acid
PDJILDJI_01611 6e-23 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PDJILDJI_01612 4.7e-10 T PFAM SpoVT AbrB
PDJILDJI_01613 5.5e-183 M lysozyme activity
PDJILDJI_01614 6.2e-18 S Bacteriophage holin family
PDJILDJI_01615 4.8e-12
PDJILDJI_01617 7.4e-37 GT2,GT4 LM gp58-like protein
PDJILDJI_01618 2.1e-41 ybaN S Protein of unknown function (DUF454)
PDJILDJI_01619 3.1e-72 S Protein of unknown function (DUF3290)
PDJILDJI_01620 6.2e-114 yviA S Protein of unknown function (DUF421)
PDJILDJI_01621 4e-164 S Alpha/beta hydrolase of unknown function (DUF915)
PDJILDJI_01622 1.3e-20
PDJILDJI_01623 8.1e-90 ntd 2.4.2.6 F Nucleoside
PDJILDJI_01624 5.6e-155 3.1.3.102, 3.1.3.104 S hydrolase
PDJILDJI_01625 1.6e-45 yrvD S Pfam:DUF1049
PDJILDJI_01627 1.1e-35 S Phage derived protein Gp49-like (DUF891)
PDJILDJI_01628 8.5e-20 K Helix-turn-helix XRE-family like proteins
PDJILDJI_01629 1.7e-78 I alpha/beta hydrolase fold
PDJILDJI_01630 1.1e-113 frnE Q DSBA-like thioredoxin domain
PDJILDJI_01631 1.4e-51
PDJILDJI_01632 2.1e-188 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PDJILDJI_01633 2.9e-34
PDJILDJI_01634 6.4e-54 S Mazg nucleotide pyrophosphohydrolase
PDJILDJI_01635 2.8e-159 xth 3.1.11.2 L exodeoxyribonuclease III
PDJILDJI_01636 3.3e-83
PDJILDJI_01637 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PDJILDJI_01638 7.5e-113 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PDJILDJI_01639 1.7e-37 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PDJILDJI_01640 3e-50 S CRISPR-associated protein (Cas_Csn2)
PDJILDJI_01641 3.6e-64 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PDJILDJI_01642 9.9e-261 yfnA E amino acid
PDJILDJI_01643 9.9e-143 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PDJILDJI_01644 9e-92 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PDJILDJI_01645 2e-39 ylqC S Belongs to the UPF0109 family
PDJILDJI_01646 2.2e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PDJILDJI_01647 2.3e-249 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PDJILDJI_01648 1.3e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PDJILDJI_01649 4.1e-180 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PDJILDJI_01650 0.0 smc D Required for chromosome condensation and partitioning
PDJILDJI_01651 4.2e-132 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PDJILDJI_01652 2.9e-38 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PDJILDJI_01653 6.1e-188 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PDJILDJI_01654 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PDJILDJI_01655 7.1e-311 yloV S DAK2 domain fusion protein YloV
PDJILDJI_01656 4.7e-58 asp S Asp23 family, cell envelope-related function
PDJILDJI_01657 7e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PDJILDJI_01658 1.8e-121 thiN 2.7.6.2 H thiamine pyrophosphokinase
PDJILDJI_01659 1.5e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PDJILDJI_01660 2.8e-165 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PDJILDJI_01661 0.0 KLT serine threonine protein kinase
PDJILDJI_01662 6.5e-131 stp 3.1.3.16 T phosphatase
PDJILDJI_01663 2.1e-249 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PDJILDJI_01664 4e-173 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PDJILDJI_01665 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PDJILDJI_01666 6.9e-215 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PDJILDJI_01667 7.7e-32 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PDJILDJI_01668 4.2e-115 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
PDJILDJI_01669 1.7e-54
PDJILDJI_01670 1.9e-263 recN L May be involved in recombinational repair of damaged DNA
PDJILDJI_01671 3.1e-75 argR K Regulates arginine biosynthesis genes
PDJILDJI_01672 1.1e-150 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PDJILDJI_01673 1.1e-158 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PDJILDJI_01674 2.1e-42 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDJILDJI_01675 5.3e-224 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PDJILDJI_01676 7.2e-150 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PDJILDJI_01677 1.2e-70 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PDJILDJI_01678 2.2e-70 yqhY S Asp23 family, cell envelope-related function
PDJILDJI_01679 1.7e-114 J 2'-5' RNA ligase superfamily
PDJILDJI_01680 5.1e-201 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PDJILDJI_01681 2.1e-131 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PDJILDJI_01682 2.1e-45 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PDJILDJI_01683 1.6e-54 ysxB J Cysteine protease Prp
PDJILDJI_01684 5.2e-50 rplU J This protein binds to 23S rRNA in the presence of protein L20
PDJILDJI_01685 1.8e-110 K Transcriptional regulator
PDJILDJI_01688 2.5e-89 dut S Protein conserved in bacteria
PDJILDJI_01689 6.6e-174
PDJILDJI_01690 1e-151
PDJILDJI_01691 3.7e-51 S Iron-sulfur cluster assembly protein
PDJILDJI_01692 4.7e-90 msrA 1.8.4.11, 1.8.4.12 C Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PDJILDJI_01694 5.1e-139 L Bacterial dnaA protein
PDJILDJI_01696 3e-119 sdaAB 4.3.1.17 E Serine dehydratase beta chain
PDJILDJI_01697 6.5e-138 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PDJILDJI_01698 2.1e-105 ahpC 1.11.1.15 O Peroxiredoxin
PDJILDJI_01699 0.0 trxB2 1.8.1.9 C Thioredoxin domain
PDJILDJI_01700 2.3e-67 gtcA S Teichoic acid glycosylation protein
PDJILDJI_01701 6.1e-79 fld C Flavodoxin
PDJILDJI_01702 3.8e-167 map 3.4.11.18 E Methionine Aminopeptidase
PDJILDJI_01703 1.7e-220 arcT 2.6.1.1 E Aminotransferase
PDJILDJI_01704 3.6e-255 E Arginine ornithine antiporter
PDJILDJI_01705 1.1e-281 yjeM E Amino Acid
PDJILDJI_01706 3.2e-153 yihY S Belongs to the UPF0761 family
PDJILDJI_01707 6.6e-34 S Protein of unknown function (DUF2922)
PDJILDJI_01708 4.9e-31
PDJILDJI_01709 7.9e-127 recX 2.4.1.337 GT4 S Regulatory protein RecX
PDJILDJI_01710 4.3e-146 cps1D M Domain of unknown function (DUF4422)
PDJILDJI_01711 1.1e-172 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
PDJILDJI_01712 3.8e-119 rfbP 2.7.8.6 M Bacterial sugar transferase
PDJILDJI_01713 1.6e-62 cps3F
PDJILDJI_01714 1.2e-34 M biosynthesis protein
PDJILDJI_01715 3.6e-66 M Domain of unknown function (DUF4422)
PDJILDJI_01716 1.5e-78 M Core-2/I-Branching enzyme
PDJILDJI_01717 3.5e-153 ykoT GT2 M Glycosyl transferase family 2
PDJILDJI_01718 7.6e-216 glf 5.4.99.9 M UDP-galactopyranose mutase
PDJILDJI_01719 3.1e-230 rfbX S Membrane protein involved in the export of O-antigen and teichoic acid
PDJILDJI_01720 3e-73 waaB GT4 M Glycosyl transferases group 1
PDJILDJI_01721 3.3e-51 cps3I G Acyltransferase family
PDJILDJI_01722 5.4e-181 galR K Transcriptional regulator
PDJILDJI_01723 7.6e-285 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PDJILDJI_01724 1.9e-225 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PDJILDJI_01725 8.6e-184 celE 3.2.1.4 GH5,GH9 E GDSL-like Lipase/Acylhydrolase family
PDJILDJI_01726 4e-147 ptp3 3.1.3.48 T Tyrosine phosphatase family
PDJILDJI_01727 1.8e-92 yxkA S Phosphatidylethanolamine-binding protein
PDJILDJI_01728 3.4e-35
PDJILDJI_01729 9.1e-53
PDJILDJI_01730 8.7e-204
PDJILDJI_01731 3.7e-82 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PDJILDJI_01732 4.4e-135 pnuC H nicotinamide mononucleotide transporter
PDJILDJI_01733 1.9e-155 ytbE 1.1.1.346 S Aldo keto reductase
PDJILDJI_01734 1.2e-123 K response regulator
PDJILDJI_01735 3.8e-179 T PhoQ Sensor
PDJILDJI_01736 2.1e-132 macB2 V ABC transporter, ATP-binding protein
PDJILDJI_01737 0.0 ysaB V FtsX-like permease family
PDJILDJI_01738 5.3e-158 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
PDJILDJI_01739 6.3e-168 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PDJILDJI_01740 4.9e-287 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDJILDJI_01741 2.1e-197 EGP Major facilitator Superfamily
PDJILDJI_01742 5.6e-86 ymdB S Macro domain protein
PDJILDJI_01743 3.2e-110 K Helix-turn-helix domain
PDJILDJI_01744 0.0 pepO 3.4.24.71 O Peptidase family M13
PDJILDJI_01745 1.8e-47
PDJILDJI_01746 8.7e-240 S Putative metallopeptidase domain
PDJILDJI_01747 3e-204 3.1.3.1 S associated with various cellular activities
PDJILDJI_01748 7.5e-120 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PDJILDJI_01749 1.6e-64 yeaO S Protein of unknown function, DUF488
PDJILDJI_01750 3.5e-35
PDJILDJI_01751 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PDJILDJI_01752 6.2e-207 carA 6.3.5.5 F Belongs to the CarA family
PDJILDJI_01753 3.8e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PDJILDJI_01754 1.3e-70 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PDJILDJI_01755 1.5e-65 esbA S Family of unknown function (DUF5322)
PDJILDJI_01756 1.7e-69 rnhA 3.1.26.4 L Ribonuclease HI
PDJILDJI_01757 1.2e-221 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PDJILDJI_01758 3.2e-83 F Belongs to the NrdI family
PDJILDJI_01759 5.5e-110 dedA S SNARE-like domain protein
PDJILDJI_01760 7e-105 S Protein of unknown function (DUF1461)
PDJILDJI_01761 1.6e-132 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PDJILDJI_01762 1.3e-93 yutD S Protein of unknown function (DUF1027)
PDJILDJI_01763 2.2e-113 S Calcineurin-like phosphoesterase
PDJILDJI_01764 2.1e-219 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PDJILDJI_01765 1.7e-145 ytxK 2.1.1.72 L N-6 DNA Methylase
PDJILDJI_01767 6.3e-70
PDJILDJI_01768 2.7e-40
PDJILDJI_01769 8.3e-78 NU general secretion pathway protein
PDJILDJI_01770 7.1e-47 comGC U competence protein ComGC
PDJILDJI_01771 9.5e-181 comGB NU type II secretion system
PDJILDJI_01772 2.6e-180 comGA NU Type II IV secretion system protein
PDJILDJI_01773 9.2e-86 D CobQ CobB MinD ParA nucleotide binding domain protein
PDJILDJI_01775 2.6e-177 sthIM 2.1.1.72 L DNA methylase
PDJILDJI_01776 0.0 res_1 3.1.21.5 L Type III restriction enzyme, res subunit
PDJILDJI_01777 2.1e-13
PDJILDJI_01779 2.3e-35 L Resolvase, N terminal domain
PDJILDJI_01783 1.5e-145
PDJILDJI_01784 0.0 FbpA K Fibronectin-binding protein
PDJILDJI_01785 1.7e-162 degV S EDD domain protein, DegV family
PDJILDJI_01786 3.8e-93
PDJILDJI_01787 2.3e-119 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PDJILDJI_01788 1.1e-158 gspA M family 8
PDJILDJI_01789 1.2e-160 S Alpha beta hydrolase
PDJILDJI_01790 1.5e-94 K Acetyltransferase (GNAT) domain
PDJILDJI_01791 4e-240 XK27_08635 S UPF0210 protein
PDJILDJI_01792 2.1e-39 gcvR T Belongs to the UPF0237 family
PDJILDJI_01794 1.6e-157 metQ_4 P Belongs to the nlpA lipoprotein family
PDJILDJI_01795 4.4e-88 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PDJILDJI_01796 1.2e-64 O Zinc-dependent metalloprotease
PDJILDJI_01797 9.5e-112 S Membrane
PDJILDJI_01798 5.2e-84
PDJILDJI_01799 1.2e-252 pgaC GT2 M Glycosyl transferase
PDJILDJI_01800 3.7e-140 T EAL domain
PDJILDJI_01801 3.4e-131 yfeJ 6.3.5.2 F glutamine amidotransferase
PDJILDJI_01802 1.1e-64 yneR
PDJILDJI_01803 1.2e-112 GM NAD(P)H-binding
PDJILDJI_01804 6.1e-88 S membrane
PDJILDJI_01805 1e-73 S membrane
PDJILDJI_01806 1.8e-104 K Transcriptional regulator C-terminal region
PDJILDJI_01807 3.2e-118 akr5f 1.1.1.346 S reductase
PDJILDJI_01808 6.5e-28 akr5f 1.1.1.346 S reductase
PDJILDJI_01809 4.3e-40 K Transcriptional regulator
PDJILDJI_01810 4.3e-59 K Transcriptional regulator
PDJILDJI_01811 5.2e-184 ansA 3.5.1.1 EJ L-asparaginase, type I
PDJILDJI_01812 2.3e-155 ypuA S Protein of unknown function (DUF1002)
PDJILDJI_01813 4.7e-66 GM NAD(P)H-binding
PDJILDJI_01814 3.3e-92 padR K Virulence activator alpha C-term
PDJILDJI_01815 2.3e-93 padC Q Phenolic acid decarboxylase
PDJILDJI_01816 2e-152 S Alpha beta hydrolase
PDJILDJI_01817 9.4e-32 S thiolester hydrolase activity
PDJILDJI_01818 6.3e-88 lacA S transferase hexapeptide repeat
PDJILDJI_01819 5.6e-158 K Transcriptional regulator
PDJILDJI_01820 2.7e-85 C Flavodoxin
PDJILDJI_01821 7.3e-166 S Oxidoreductase, aldo keto reductase family protein
PDJILDJI_01822 8.2e-166 K COG COG0846 NAD-dependent protein deacetylases, SIR2 family
PDJILDJI_01823 2.2e-77 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PDJILDJI_01824 5.3e-83 K Bacterial regulatory proteins, tetR family
PDJILDJI_01825 4.3e-55 yphJ 4.1.1.44 S decarboxylase
PDJILDJI_01826 2e-74 P FAD-binding domain
PDJILDJI_01827 3e-108 S Peptidase propeptide and YPEB domain
PDJILDJI_01828 9.9e-239 T GHKL domain
PDJILDJI_01829 7.3e-121 T Transcriptional regulatory protein, C terminal
PDJILDJI_01830 3.9e-27 mleP3 S Membrane transport protein
PDJILDJI_01831 3.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PDJILDJI_01832 1.5e-118 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PDJILDJI_01833 5.5e-107 rplD J Forms part of the polypeptide exit tunnel
PDJILDJI_01834 5.7e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PDJILDJI_01835 4.2e-150 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PDJILDJI_01836 1.4e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PDJILDJI_01837 4.8e-52 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PDJILDJI_01838 6.1e-112 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PDJILDJI_01839 3.5e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PDJILDJI_01840 8.4e-28 rpmC J Belongs to the universal ribosomal protein uL29 family
PDJILDJI_01841 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PDJILDJI_01842 4.3e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PDJILDJI_01843 2.6e-49 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PDJILDJI_01844 1.4e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PDJILDJI_01845 1.3e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PDJILDJI_01846 1.6e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PDJILDJI_01847 6.6e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PDJILDJI_01848 2.2e-85 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PDJILDJI_01849 2.9e-24 rpmD J Ribosomal protein L30
PDJILDJI_01850 8.9e-64 rplO J Binds to the 23S rRNA
PDJILDJI_01851 8.8e-240 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PDJILDJI_01852 8.1e-125 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PDJILDJI_01853 5.9e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PDJILDJI_01854 1.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PDJILDJI_01855 4.7e-58 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PDJILDJI_01856 2.3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PDJILDJI_01857 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PDJILDJI_01858 1.1e-62 rplQ J Ribosomal protein L17
PDJILDJI_01859 3e-145 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDJILDJI_01860 7.8e-152 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDJILDJI_01861 5.7e-141 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PDJILDJI_01862 1.9e-141 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PDJILDJI_01863 4.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PDJILDJI_01864 5.6e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
PDJILDJI_01865 1.6e-112 IQ reductase
PDJILDJI_01866 2.3e-19 IQ reductase
PDJILDJI_01867 1.5e-112 acmC 3.2.1.96 NU mannosyl-glycoprotein
PDJILDJI_01868 2.3e-99 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PDJILDJI_01869 5.5e-214 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PDJILDJI_01870 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PDJILDJI_01871 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PDJILDJI_01872 3.3e-203 camS S sex pheromone
PDJILDJI_01873 2.4e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDJILDJI_01874 1e-276 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PDJILDJI_01875 5.4e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PDJILDJI_01876 5.1e-187 yegS 2.7.1.107 G Lipid kinase
PDJILDJI_01877 7.3e-261 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PDJILDJI_01878 2.8e-18
PDJILDJI_01881 4.4e-150 polA_2 2.7.7.7 L DNA polymerase
PDJILDJI_01882 1.5e-95 S Protein of unknown function (DUF2815)
PDJILDJI_01883 4.5e-208 L Protein of unknown function (DUF2800)
PDJILDJI_01884 5.1e-45
PDJILDJI_01885 6.5e-25
PDJILDJI_01887 2.8e-147
PDJILDJI_01888 8.8e-87
PDJILDJI_01889 6.6e-173 ppaC 3.6.1.1 C inorganic pyrophosphatase
PDJILDJI_01890 4.9e-84 F NUDIX domain
PDJILDJI_01891 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PDJILDJI_01892 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PDJILDJI_01893 5.5e-107 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PDJILDJI_01894 4.3e-166 lacX 5.1.3.3 G Aldose 1-epimerase
PDJILDJI_01895 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PDJILDJI_01896 2.4e-161 dprA LU DNA protecting protein DprA
PDJILDJI_01897 1.2e-140 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PDJILDJI_01898 4.6e-160 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PDJILDJI_01899 4.4e-35 yozE S Belongs to the UPF0346 family
PDJILDJI_01900 1.6e-108 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
PDJILDJI_01901 9.5e-172 ypmR E lipolytic protein G-D-S-L family
PDJILDJI_01902 1.7e-151 DegV S EDD domain protein, DegV family
PDJILDJI_01903 5.3e-113 hlyIII S protein, hemolysin III
PDJILDJI_01904 1.9e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PDJILDJI_01905 5.9e-193 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PDJILDJI_01906 0.0 yfmR S ABC transporter, ATP-binding protein
PDJILDJI_01907 9.6e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PDJILDJI_01908 1.5e-236 S Tetratricopeptide repeat protein
PDJILDJI_01909 2.6e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PDJILDJI_01910 7.2e-250 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PDJILDJI_01911 5.1e-205 rpsA 1.17.7.4 J Ribosomal protein S1
PDJILDJI_01912 3.4e-118 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PDJILDJI_01913 8.5e-14 M Lysin motif
PDJILDJI_01914 1.5e-269 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
PDJILDJI_01915 9.1e-192 ypbB 5.1.3.1 S Helix-turn-helix domain
PDJILDJI_01916 1.5e-103 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PDJILDJI_01917 5.8e-129 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PDJILDJI_01918 7.7e-106 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PDJILDJI_01919 7.6e-138 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PDJILDJI_01920 1.5e-64 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PDJILDJI_01921 4.5e-163 xerD D recombinase XerD
PDJILDJI_01922 2.3e-167 cvfB S S1 domain
PDJILDJI_01923 2.1e-271 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PDJILDJI_01924 0.0 dnaE 2.7.7.7 L DNA polymerase
PDJILDJI_01925 3e-30 S Protein of unknown function (DUF2929)
PDJILDJI_01926 7.3e-236 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PDJILDJI_01927 5.9e-157 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PDJILDJI_01928 9.6e-124 trmK 2.1.1.217 S SAM-dependent methyltransferase
PDJILDJI_01929 1.2e-219 patA 2.6.1.1 E Aminotransferase
PDJILDJI_01930 1.9e-206 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PDJILDJI_01931 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PDJILDJI_01932 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PDJILDJI_01933 2e-180 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PDJILDJI_01934 6.8e-147 recO L Involved in DNA repair and RecF pathway recombination
PDJILDJI_01935 1.9e-169 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PDJILDJI_01936 9.9e-62 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
PDJILDJI_01937 1.9e-83 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PDJILDJI_01938 1.2e-183 phoH T phosphate starvation-inducible protein PhoH
PDJILDJI_01939 5.6e-175 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PDJILDJI_01940 1.1e-90 bioY S BioY family
PDJILDJI_01941 1.4e-264 argH 4.3.2.1 E argininosuccinate lyase
PDJILDJI_01942 8.4e-156 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PDJILDJI_01943 2.7e-39 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PDJILDJI_01944 8.7e-184 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PDJILDJI_01945 5.9e-30 2.7.13.3 T GHKL domain
PDJILDJI_01947 1.3e-260 S Putative peptidoglycan binding domain
PDJILDJI_01948 2e-180 yfeX P Peroxidase
PDJILDJI_01949 2.9e-71 arcD S C4-dicarboxylate anaerobic carrier
PDJILDJI_01950 1e-182 arcD S C4-dicarboxylate anaerobic carrier
PDJILDJI_01951 4.1e-253 ytjP 3.5.1.18 E Dipeptidase
PDJILDJI_01952 5.3e-215 uhpT EGP Major facilitator Superfamily
PDJILDJI_01953 1.7e-284 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
PDJILDJI_01954 4.8e-132 ponA V Beta-lactamase enzyme family
PDJILDJI_01955 1.5e-166 corA P CorA-like Mg2+ transporter protein
PDJILDJI_01956 4.1e-167 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PDJILDJI_01957 1.5e-130 terC P membrane
PDJILDJI_01958 2.1e-54 trxA O Belongs to the thioredoxin family
PDJILDJI_01959 1.6e-236 mepA V MATE efflux family protein
PDJILDJI_01960 3.9e-93 M domain protein
PDJILDJI_01961 1.2e-55 K Transcriptional regulator, ArsR family
PDJILDJI_01962 1e-91 P Cadmium resistance transporter
PDJILDJI_01963 1.1e-136 XK27_08845 S ABC transporter, ATP-binding protein
PDJILDJI_01964 1.6e-152 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PDJILDJI_01965 2.2e-182 ABC-SBP S ABC transporter
PDJILDJI_01966 1.5e-72 M PFAM NLP P60 protein
PDJILDJI_01968 6.3e-213 phbA 2.3.1.9 I Belongs to the thiolase family
PDJILDJI_01969 1.5e-172 malR K Transcriptional regulator, LacI family
PDJILDJI_01970 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PDJILDJI_01971 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PDJILDJI_01972 6.1e-282 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PDJILDJI_01973 3.1e-104 wecD3 K PFAM GCN5-related N-acetyltransferase
PDJILDJI_01976 0.0 clpL O associated with various cellular activities
PDJILDJI_01977 7.8e-32
PDJILDJI_01978 6.1e-216 patA 2.6.1.1 E Aminotransferase
PDJILDJI_01979 8e-177 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PDJILDJI_01980 5e-75 osmC O OsmC-like protein

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)