ORF_ID e_value Gene_name EC_number CAZy COGs Description
GOKDLDOB_00001 4.3e-46 L Transposase
GOKDLDOB_00002 8.5e-128 L Integrase core domain
GOKDLDOB_00003 1.2e-157 metQ_4 P Belongs to the nlpA lipoprotein family
GOKDLDOB_00004 2.6e-88 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
GOKDLDOB_00005 3.5e-123 O Zinc-dependent metalloprotease
GOKDLDOB_00006 3.7e-105 S Membrane
GOKDLDOB_00007 1.7e-196 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
GOKDLDOB_00008 3.1e-33 L PFAM Integrase catalytic region
GOKDLDOB_00009 1.3e-187 L PFAM Integrase catalytic region
GOKDLDOB_00010 1e-130 2.4.1.52 GT4 M Glycosyl transferases group 1
GOKDLDOB_00011 1.5e-201 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
GOKDLDOB_00012 2.7e-79 L transposase and inactivated derivatives, IS30 family
GOKDLDOB_00013 1e-38 tra L Transposase and inactivated derivatives, IS30 family
GOKDLDOB_00015 1.2e-95 L Integrase
GOKDLDOB_00016 0.0 tetP J of the elongation factors EF-G and EF-2. Tet(M) and Tet(O) catalyze the release of tetracycline (Tc) from the ribosome
GOKDLDOB_00018 8.3e-69 yqkB S Belongs to the HesB IscA family
GOKDLDOB_00019 2.7e-49
GOKDLDOB_00021 1.6e-88 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
GOKDLDOB_00022 1.3e-61 asp S Asp23 family, cell envelope-related function
GOKDLDOB_00023 2.3e-24
GOKDLDOB_00024 3.2e-95
GOKDLDOB_00025 1.8e-289 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
GOKDLDOB_00026 5.8e-183 K Transcriptional regulator, LacI family
GOKDLDOB_00027 1.3e-233 gntT EG Gluconate
GOKDLDOB_00028 7e-297 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
GOKDLDOB_00029 2.2e-96 K Acetyltransferase (GNAT) domain
GOKDLDOB_00030 4.2e-47
GOKDLDOB_00031 0.0 nylA 3.5.1.4 J Belongs to the amidase family
GOKDLDOB_00032 2.2e-44
GOKDLDOB_00033 1.6e-41 yhaI S Protein of unknown function (DUF805)
GOKDLDOB_00034 3.8e-29
GOKDLDOB_00035 7.2e-63
GOKDLDOB_00036 2.7e-20
GOKDLDOB_00037 0.0 L PLD-like domain
GOKDLDOB_00039 5.1e-181 rihA 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
GOKDLDOB_00040 1.7e-188 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
GOKDLDOB_00041 3e-94 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
GOKDLDOB_00042 9.4e-225 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
GOKDLDOB_00043 4.4e-77 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
GOKDLDOB_00044 3.9e-104 T Ion transport 2 domain protein
GOKDLDOB_00045 0.0 S Bacterial membrane protein YfhO
GOKDLDOB_00046 8.6e-202 G Transporter, major facilitator family protein
GOKDLDOB_00047 2.4e-109 yvrI K sigma factor activity
GOKDLDOB_00048 1.7e-63 ydiI Q Thioesterase superfamily
GOKDLDOB_00049 2.2e-156 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
GOKDLDOB_00050 4.2e-272 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
GOKDLDOB_00051 1.1e-150 L hmm pf00665
GOKDLDOB_00052 9.6e-56 L Helix-turn-helix domain
GOKDLDOB_00053 1e-79 Q Methyltransferase
GOKDLDOB_00054 1.4e-116 ktrA P domain protein
GOKDLDOB_00055 3.8e-238 ktrB P Potassium uptake protein
GOKDLDOB_00056 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
GOKDLDOB_00057 3.6e-137 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
GOKDLDOB_00058 4.4e-219 G Glycosyl hydrolases family 8
GOKDLDOB_00059 1e-243 ydaM M Glycosyl transferase
GOKDLDOB_00061 2e-139
GOKDLDOB_00062 6.6e-125 phoU P Plays a role in the regulation of phosphate uptake
GOKDLDOB_00063 1.4e-136 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GOKDLDOB_00064 7.9e-152 pstA P Phosphate transport system permease protein PstA
GOKDLDOB_00065 7.3e-153 pstC P probably responsible for the translocation of the substrate across the membrane
GOKDLDOB_00066 2.1e-157 pstS P Phosphate
GOKDLDOB_00067 2.8e-131 K Transcriptional regulatory protein, C-terminal domain protein
GOKDLDOB_00068 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
GOKDLDOB_00069 1e-204 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
GOKDLDOB_00070 4.7e-260 G Major Facilitator
GOKDLDOB_00071 1.1e-178 K Transcriptional regulator, LacI family
GOKDLDOB_00072 1.6e-51 K LysR substrate binding domain
GOKDLDOB_00073 1.2e-189 1.3.5.4 C FAD binding domain
GOKDLDOB_00074 8.2e-268 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GOKDLDOB_00075 1.2e-100 nqr 1.5.1.36 S reductase
GOKDLDOB_00076 5.1e-197 XK27_09615 S reductase
GOKDLDOB_00077 8.8e-178 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GOKDLDOB_00078 0.0 lacS G Transporter
GOKDLDOB_00079 1.1e-40
GOKDLDOB_00080 1.4e-275 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GOKDLDOB_00081 1.7e-287 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GOKDLDOB_00082 8e-194 yeaN P Transporter, major facilitator family protein
GOKDLDOB_00083 3.2e-74 S 3-demethylubiquinone-9 3-methyltransferase
GOKDLDOB_00084 2.9e-84 nrdI F Belongs to the NrdI family
GOKDLDOB_00085 6.2e-241 yhdP S Transporter associated domain
GOKDLDOB_00086 7.5e-155 ypdB V (ABC) transporter
GOKDLDOB_00087 3.9e-90 GM epimerase
GOKDLDOB_00088 1e-90 M1-874 K Domain of unknown function (DUF1836)
GOKDLDOB_00089 6.6e-78 yybA 2.3.1.57 K Transcriptional regulator
GOKDLDOB_00090 2.8e-134 XK27_07210 6.1.1.6 S B3 4 domain
GOKDLDOB_00091 2.2e-151 S AI-2E family transporter
GOKDLDOB_00092 2.9e-159 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
GOKDLDOB_00093 3.8e-165
GOKDLDOB_00094 3.5e-134 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GOKDLDOB_00095 4.1e-150 eutJ E Hsp70 protein
GOKDLDOB_00096 3e-201 K helix_turn_helix, arabinose operon control protein
GOKDLDOB_00097 6.2e-42 pduA_4 CQ BMC
GOKDLDOB_00098 2.7e-134 pduB E BMC
GOKDLDOB_00099 0.0 pduC 4.2.1.28 Q Dehydratase large subunit
GOKDLDOB_00100 8.4e-128 pduD 4.2.1.28, 4.2.1.30 Q Dehydratase medium subunit
GOKDLDOB_00101 2.6e-78 pduE 4.2.1.28 Q Dehydratase small subunit
GOKDLDOB_00102 0.0 pduG D Diol dehydratase reactivase ATPase-like domain
GOKDLDOB_00103 1.7e-60 pduH S Dehydratase medium subunit
GOKDLDOB_00104 3.6e-73 pduK CQ BMC
GOKDLDOB_00105 7.6e-43 pduA_4 CQ BMC
GOKDLDOB_00106 4.2e-118 pduL 2.3.1.222, 2.3.1.8 Q Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate
GOKDLDOB_00107 6.4e-90 S Putative propanediol utilisation
GOKDLDOB_00108 1.8e-41 ccmL CQ Ethanolamine utilisation protein EutN/carboxysome
GOKDLDOB_00109 2.8e-105 pduO 2.5.1.17 S Cobalamin adenosyltransferase
GOKDLDOB_00110 7.4e-80 pduO S Haem-degrading
GOKDLDOB_00111 3.1e-270 pduP 1.2.1.87 C Aldehyde dehydrogenase family
GOKDLDOB_00112 1.3e-210 pduQ C Iron-containing alcohol dehydrogenase
GOKDLDOB_00113 2.8e-221 ackA 2.7.2.1, 2.7.2.15 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GOKDLDOB_00114 5.5e-56 pduU E BMC
GOKDLDOB_00115 1.6e-148 3.1.3.48 T Pfam:Y_phosphatase3C
GOKDLDOB_00116 9e-121 pgm1 3.1.3.73 G phosphoglycerate mutase
GOKDLDOB_00117 3.1e-93 P Cadmium resistance transporter
GOKDLDOB_00118 3e-72 eutP E Ethanolamine utilisation - propanediol utilisation
GOKDLDOB_00119 1.5e-77 fld C Flavodoxin
GOKDLDOB_00120 1.2e-157 XK27_04590 S NADPH-dependent FMN reductase
GOKDLDOB_00121 1.7e-102 cobO 2.5.1.17 S Cobalamin adenosyltransferase
GOKDLDOB_00122 8.1e-207 cobD 4.1.1.81 E Aminotransferase class I and II
GOKDLDOB_00123 6.7e-259 cbiA 6.3.5.11, 6.3.5.9 F Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source
GOKDLDOB_00124 2.8e-179 cobD 6.3.1.10 H Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
GOKDLDOB_00125 9.2e-124 cbiC 5.4.99.60, 5.4.99.61 H Precorrin-8X methylmutase
GOKDLDOB_00126 3.3e-206 cbiD 2.1.1.195 H Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
GOKDLDOB_00127 1e-110 cbiE 2.1.1.132, 2.1.1.289 H Tetrapyrrole (Corrin/Porphyrin) Methylases
GOKDLDOB_00128 9.2e-98 cbiT 2.1.1.132, 2.1.1.196 H Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
GOKDLDOB_00129 5.8e-135 cobM 1.3.1.76, 2.1.1.131, 2.1.1.133, 2.1.1.271, 3.7.1.12, 4.99.1.4 H Tetrapyrrole (Corrin/Porphyrin) Methylases
GOKDLDOB_00130 4.1e-195 cbiG 2.1.1.131, 2.1.1.133, 2.1.1.271, 3.7.1.12 H Cobalamin synthesis G C-terminus
GOKDLDOB_00131 1.7e-131 cobJ 2.1.1.131, 2.1.1.133, 2.1.1.271, 3.7.1.12, 6.3.5.10 H Tetrapyrrole (Corrin/Porphyrin) Methylases
GOKDLDOB_00132 1.5e-135 cobK 1.3.1.106, 1.3.1.54, 2.1.1.195 H Precorrin-6x reductase CbiJ/CobK
GOKDLDOB_00133 2.4e-259 cobA 2.1.1.107, 4.2.1.75 H Tetrapyrrole (Corrin/Porphyrin) Methylases
GOKDLDOB_00134 1.2e-146 cbiK 4.99.1.3 H Cobalt chelatase (CbiK)
GOKDLDOB_00135 2.3e-125 cobI 2.1.1.130, 2.1.1.151, 4.99.1.3 H Tetrapyrrole (Corrin/Porphyrin) Methylases
GOKDLDOB_00136 2.4e-133 cbiM P Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import
GOKDLDOB_00137 8.7e-53 cbiN P Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import
GOKDLDOB_00138 1.3e-117 cbiQ P Cobalt transport protein
GOKDLDOB_00139 7.5e-149 cbiO 2.1.1.195 P part of an ABC transporter complex. Responsible for energy coupling to the transport system
GOKDLDOB_00140 6.9e-281 cobQ 6.3.5.10 H Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
GOKDLDOB_00141 2.7e-79 cysG 1.3.1.76, 4.99.1.4 H Putative NAD(P)-binding
GOKDLDOB_00142 7.4e-236 hemA 1.2.1.70 H Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
GOKDLDOB_00143 2.6e-169 hemC 2.1.1.107, 2.5.1.61, 4.2.1.75 H Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps
GOKDLDOB_00144 1.2e-180 hemB 4.2.1.24 H Delta-aminolevulinic acid dehydratase
GOKDLDOB_00145 1.2e-249 hemL 5.4.3.8 H Aminotransferase class-III
GOKDLDOB_00146 3.5e-103 cobU 2.7.1.156, 2.7.7.62, 6.3.5.10 H Cobinamide kinase / cobinamide phosphate guanyltransferase
GOKDLDOB_00147 2e-135 cobS 2.7.8.26 H Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
GOKDLDOB_00148 5.4e-112 gpm 3.1.3.73, 5.4.2.12 G Belongs to the phosphoglycerate mutase family
GOKDLDOB_00149 2e-129 hemD 2.1.1.107, 4.2.1.75 H Uroporphyrinogen-III synthase
GOKDLDOB_00150 2.2e-193 cobT 2.4.2.21, 6.3.5.11, 6.3.5.9 F Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB)
GOKDLDOB_00151 8.1e-61 S Domain of unknown function (DUF4430)
GOKDLDOB_00152 1.2e-81 S ECF transporter, substrate-specific component
GOKDLDOB_00153 1.1e-189 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GOKDLDOB_00154 1.2e-308 lmrA V ABC transporter, ATP-binding protein
GOKDLDOB_00155 0.0 yfiC V ABC transporter
GOKDLDOB_00156 1.4e-283 pipD E Dipeptidase
GOKDLDOB_00157 4.2e-89 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GOKDLDOB_00158 4e-133 gntR K UbiC transcription regulator-associated domain protein
GOKDLDOB_00159 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
GOKDLDOB_00160 9.5e-183 iunH2 3.2.2.1 F nucleoside hydrolase
GOKDLDOB_00161 1.1e-181 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
GOKDLDOB_00162 4.7e-116 agrA K LytTr DNA-binding domain
GOKDLDOB_00163 1.4e-19 S Domain of unknown function (DUF4767)
GOKDLDOB_00164 4.6e-10
GOKDLDOB_00165 8.1e-17
GOKDLDOB_00168 1.9e-24 S Domain of unknown function (DUF4767)
GOKDLDOB_00170 5.1e-148 3.6.4.12 S PD-(D/E)XK nuclease family transposase
GOKDLDOB_00171 2.1e-115 3.6.4.12 S PD-(D/E)XK nuclease family transposase
GOKDLDOB_00172 1.5e-115 gph 3.1.3.18 S HAD hydrolase, family IA, variant
GOKDLDOB_00173 4.8e-126 O Bacterial dnaA protein
GOKDLDOB_00174 2.6e-217 L Integrase core domain
GOKDLDOB_00175 1e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
GOKDLDOB_00176 4.5e-169 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GOKDLDOB_00177 7.4e-68 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
GOKDLDOB_00178 1.8e-229 V MatE
GOKDLDOB_00179 4.3e-267 yjeM E Amino Acid
GOKDLDOB_00180 4.1e-278 arlS 2.7.13.3 T Histidine kinase
GOKDLDOB_00181 1.5e-121 K response regulator
GOKDLDOB_00182 1.1e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
GOKDLDOB_00183 2.9e-99 yceD S Uncharacterized ACR, COG1399
GOKDLDOB_00184 1.5e-211 ylbM S Belongs to the UPF0348 family
GOKDLDOB_00185 8.4e-139 yqeM Q Methyltransferase
GOKDLDOB_00186 4.9e-60 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
GOKDLDOB_00187 3.5e-114 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
GOKDLDOB_00188 1.1e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GOKDLDOB_00189 1.9e-47 yhbY J RNA-binding protein
GOKDLDOB_00190 2.1e-218 yqeH S Ribosome biogenesis GTPase YqeH
GOKDLDOB_00191 3.7e-96 yqeG S HAD phosphatase, family IIIA
GOKDLDOB_00192 3.3e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GOKDLDOB_00193 2.3e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
GOKDLDOB_00194 3.7e-85 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GOKDLDOB_00195 4.8e-171 dnaI L Primosomal protein DnaI
GOKDLDOB_00196 8.6e-206 dnaB L replication initiation and membrane attachment
GOKDLDOB_00197 1.1e-80 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GOKDLDOB_00198 3.9e-102 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GOKDLDOB_00199 5.7e-160 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
GOKDLDOB_00200 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GOKDLDOB_00201 1.9e-116 yoaK S Protein of unknown function (DUF1275)
GOKDLDOB_00202 5.5e-119 ybhL S Belongs to the BI1 family
GOKDLDOB_00203 4.5e-252 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
GOKDLDOB_00204 2.5e-118 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GOKDLDOB_00205 1.7e-56 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
GOKDLDOB_00206 2.6e-112 K Transcriptional regulator
GOKDLDOB_00209 5.5e-89 dut S Protein conserved in bacteria
GOKDLDOB_00210 4.1e-184
GOKDLDOB_00211 1e-151
GOKDLDOB_00212 1.4e-50 S Iron-sulfur cluster assembly protein
GOKDLDOB_00213 1.4e-100 msrA 1.8.4.11, 1.8.4.12 C Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GOKDLDOB_00214 1.9e-155 P Belongs to the nlpA lipoprotein family
GOKDLDOB_00215 3.9e-12
GOKDLDOB_00216 1.5e-217 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
GOKDLDOB_00217 5.3e-297 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GOKDLDOB_00218 8e-182 M lysozyme activity
GOKDLDOB_00219 8.8e-16 S Bacteriophage holin family
GOKDLDOB_00220 4.8e-12
GOKDLDOB_00222 0.0 GT2,GT4 LM gp58-like protein
GOKDLDOB_00223 1.2e-50
GOKDLDOB_00224 0.0 M Phage tail tape measure protein TP901
GOKDLDOB_00225 5.7e-32
GOKDLDOB_00226 9e-58
GOKDLDOB_00227 6.5e-71 S Phage tail tube protein, TTP
GOKDLDOB_00228 2.1e-45
GOKDLDOB_00229 1.6e-78
GOKDLDOB_00230 1.2e-58
GOKDLDOB_00231 3.6e-35
GOKDLDOB_00232 1.8e-166 S Phage major capsid protein E
GOKDLDOB_00233 2.3e-52
GOKDLDOB_00234 1.4e-49 S Domain of unknown function (DUF4355)
GOKDLDOB_00235 2.6e-149 S Phage Mu protein F like protein
GOKDLDOB_00236 1.3e-215 S Phage portal protein, SPP1 Gp6-like
GOKDLDOB_00237 1.7e-219 S Terminase-like family
GOKDLDOB_00238 9.2e-121 xtmA L Terminase small subunit
GOKDLDOB_00241 1.9e-62 S Domain of unknown function (DUF4417)
GOKDLDOB_00246 1.7e-37
GOKDLDOB_00250 4.9e-76 Q DNA (cytosine-5-)-methyltransferase activity
GOKDLDOB_00255 1.9e-18
GOKDLDOB_00257 2.3e-50 S ORF6C domain
GOKDLDOB_00260 6e-28
GOKDLDOB_00261 3.5e-30 K Conserved phage C-terminus (Phg_2220_C)
GOKDLDOB_00262 1.4e-74 S Putative HNHc nuclease
GOKDLDOB_00263 2.2e-36 S Protein of unknown function (DUF669)
GOKDLDOB_00264 1.4e-82 S AAA domain
GOKDLDOB_00265 1.2e-83 S Bacteriophage Mu Gam like protein
GOKDLDOB_00273 5.6e-19
GOKDLDOB_00274 2.5e-11 S Hypothetical protein (DUF2513)
GOKDLDOB_00280 1.5e-82 S Phage antirepressor protein KilAC domain
GOKDLDOB_00283 3e-25
GOKDLDOB_00284 4.9e-32 ps115 K Transcriptional regulator, Cro CI family
GOKDLDOB_00285 1.6e-20 E Zn peptidase
GOKDLDOB_00286 1e-61 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
GOKDLDOB_00287 9.8e-11
GOKDLDOB_00288 9.9e-42
GOKDLDOB_00289 1.4e-45
GOKDLDOB_00290 1e-149 L Belongs to the 'phage' integrase family
GOKDLDOB_00291 6.2e-265 glnA 6.3.1.2 E glutamine synthetase
GOKDLDOB_00292 1.2e-174 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GOKDLDOB_00293 5.9e-22 S Protein of unknown function (DUF3042)
GOKDLDOB_00294 3.4e-67 yqhL P Rhodanese-like protein
GOKDLDOB_00295 1.5e-183 glk 2.7.1.2 G Glucokinase
GOKDLDOB_00296 7.4e-36 yqgQ S Bacterial protein of unknown function (DUF910)
GOKDLDOB_00297 2.4e-113 gluP 3.4.21.105 S Peptidase, S54 family
GOKDLDOB_00298 1.3e-99 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
GOKDLDOB_00299 4.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
GOKDLDOB_00300 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
GOKDLDOB_00301 0.0 S membrane
GOKDLDOB_00302 3.7e-69 yneR S Belongs to the HesB IscA family
GOKDLDOB_00303 1.4e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GOKDLDOB_00304 2.5e-118 udk 2.7.1.48 F Cytidine monophosphokinase
GOKDLDOB_00305 3e-116 rlpA M PFAM NLP P60 protein
GOKDLDOB_00306 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GOKDLDOB_00307 6.6e-198 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GOKDLDOB_00308 6.7e-59 yodB K Transcriptional regulator, HxlR family
GOKDLDOB_00309 3.1e-92 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
GOKDLDOB_00310 2.2e-145 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GOKDLDOB_00311 0.0 dnaE 2.7.7.7 L DNA polymerase
GOKDLDOB_00312 2.1e-271 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
GOKDLDOB_00313 9.3e-169 cvfB S S1 domain
GOKDLDOB_00314 5.7e-166 xerD D recombinase XerD
GOKDLDOB_00315 1.5e-64 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
GOKDLDOB_00316 5.8e-138 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
GOKDLDOB_00317 2.2e-105 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GOKDLDOB_00318 4.9e-128 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GOKDLDOB_00319 5.8e-103 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GOKDLDOB_00320 2.6e-191 ypbB 5.1.3.1 S Helix-turn-helix domain
GOKDLDOB_00321 1.8e-270 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
GOKDLDOB_00322 8.5e-14 M Lysin motif
GOKDLDOB_00323 7.6e-118 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
GOKDLDOB_00324 3.9e-205 rpsA 1.17.7.4 J Ribosomal protein S1
GOKDLDOB_00325 7.2e-250 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
GOKDLDOB_00326 2.6e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
GOKDLDOB_00327 1.5e-236 S Tetratricopeptide repeat protein
GOKDLDOB_00328 5.7e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
GOKDLDOB_00329 0.0 yfmR S ABC transporter, ATP-binding protein
GOKDLDOB_00330 2.9e-192 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GOKDLDOB_00331 5.1e-92 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
GOKDLDOB_00332 1.5e-112 hlyIII S protein, hemolysin III
GOKDLDOB_00333 3.1e-153 DegV S EDD domain protein, DegV family
GOKDLDOB_00334 3.6e-147 ypmR E lipolytic protein G-D-S-L family
GOKDLDOB_00335 1.6e-108 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
GOKDLDOB_00336 4.4e-35 yozE S Belongs to the UPF0346 family
GOKDLDOB_00337 8.4e-162 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
GOKDLDOB_00338 3.2e-141 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GOKDLDOB_00339 1.2e-163 dprA LU DNA protecting protein DprA
GOKDLDOB_00340 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GOKDLDOB_00341 3.8e-170 lacX 5.1.3.3 G Aldose 1-epimerase
GOKDLDOB_00342 1.5e-107 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
GOKDLDOB_00343 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GOKDLDOB_00344 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GOKDLDOB_00345 8.9e-86 F NUDIX domain
GOKDLDOB_00346 2.3e-173 ppaC 3.6.1.1 C inorganic pyrophosphatase
GOKDLDOB_00347 1.2e-19 L hmm pf00665
GOKDLDOB_00348 8.1e-35 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
GOKDLDOB_00349 6.7e-33 infB UW LPXTG-motif cell wall anchor domain protein
GOKDLDOB_00351 1.6e-51 M NlpC P60 family protein
GOKDLDOB_00352 1.3e-233 S Putative peptidoglycan binding domain
GOKDLDOB_00356 9e-168 2.7.13.3 T GHKL domain
GOKDLDOB_00357 2e-135 K LytTr DNA-binding domain
GOKDLDOB_00359 5.9e-241 V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
GOKDLDOB_00361 5e-75 osmC O OsmC-like protein
GOKDLDOB_00362 6.2e-177 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GOKDLDOB_00363 4.1e-220 patA 2.6.1.1 E Aminotransferase
GOKDLDOB_00364 2.7e-32
GOKDLDOB_00365 0.0 clpL O associated with various cellular activities
GOKDLDOB_00366 1.9e-74 copY K Copper transport repressor CopY TcrY
GOKDLDOB_00367 8.5e-246 yhdP S Transporter associated domain
GOKDLDOB_00368 0.0 ubiB S ABC1 family
GOKDLDOB_00369 1.3e-143 S DUF218 domain
GOKDLDOB_00370 3.2e-68 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GOKDLDOB_00371 2.4e-57 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GOKDLDOB_00372 4.5e-55 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GOKDLDOB_00373 0.0 uvrA3 L excinuclease ABC, A subunit
GOKDLDOB_00374 1.1e-121 S SNARE associated Golgi protein
GOKDLDOB_00375 3.9e-229 N Uncharacterized conserved protein (DUF2075)
GOKDLDOB_00376 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GOKDLDOB_00378 7.8e-255 yifK E Amino acid permease
GOKDLDOB_00379 1.4e-150 endA V DNA/RNA non-specific endonuclease
GOKDLDOB_00380 0.0 I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOKDLDOB_00381 3.5e-42 ybaN S Protein of unknown function (DUF454)
GOKDLDOB_00382 1.8e-72 S Protein of unknown function (DUF3290)
GOKDLDOB_00383 8.1e-114 yviA S Protein of unknown function (DUF421)
GOKDLDOB_00384 1.4e-164 S Alpha/beta hydrolase of unknown function (DUF915)
GOKDLDOB_00385 2.8e-20
GOKDLDOB_00386 2.1e-90 ntd 2.4.2.6 F Nucleoside
GOKDLDOB_00387 2.8e-151 3.1.3.102, 3.1.3.104 S hydrolase
GOKDLDOB_00388 3.4e-48 yrvD S Pfam:DUF1049
GOKDLDOB_00390 8.5e-20 K Helix-turn-helix XRE-family like proteins
GOKDLDOB_00391 2.6e-163 I alpha/beta hydrolase fold
GOKDLDOB_00392 3.7e-114 frnE Q DSBA-like thioredoxin domain
GOKDLDOB_00393 2.3e-54
GOKDLDOB_00402 9.3e-133 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
GOKDLDOB_00403 8e-140 accA 2.1.3.15, 6.4.1.2 I alpha subunit
GOKDLDOB_00404 6.5e-143 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
GOKDLDOB_00405 2.2e-257 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
GOKDLDOB_00406 3.9e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
GOKDLDOB_00407 2e-74 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
GOKDLDOB_00408 4e-226 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
GOKDLDOB_00409 4.2e-130 IQ reductase
GOKDLDOB_00410 6.5e-160 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
GOKDLDOB_00411 1.5e-34 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
GOKDLDOB_00412 1.2e-177 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
GOKDLDOB_00413 4.2e-77 marR K Transcriptional regulator, MarR family
GOKDLDOB_00414 6.6e-72 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
GOKDLDOB_00416 4.6e-202 xerS L Belongs to the 'phage' integrase family
GOKDLDOB_00417 7.7e-48 L PFAM transposase IS200-family protein
GOKDLDOB_00418 2.1e-285 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
GOKDLDOB_00419 2.2e-10 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
GOKDLDOB_00420 1.4e-158 rssA S Phospholipase, patatin family
GOKDLDOB_00421 2.5e-118 L Integrase
GOKDLDOB_00422 2.7e-152 EG EamA-like transporter family
GOKDLDOB_00423 3.3e-129 narI 1.7.5.1 C Nitrate reductase
GOKDLDOB_00424 4.3e-98 narJ C nitrate reductase molybdenum cofactor assembly chaperone
GOKDLDOB_00425 0.0 narH 1.7.5.1 C 4Fe-4S dicluster domain
GOKDLDOB_00426 0.0 narG 1.7.5.1 C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
GOKDLDOB_00427 1.5e-186 moeB 2.7.7.73, 2.7.7.80 H ThiF family
GOKDLDOB_00428 8.9e-84 moaB 2.7.7.75 H May be involved in the biosynthesis of molybdopterin
GOKDLDOB_00429 4.8e-224 moeA 2.10.1.1 H MoeA N-terminal region (domain I and II)
GOKDLDOB_00430 7.5e-75 mobB 2.10.1.1, 2.7.7.77 H molybdopterin-guanine dinucleotide biosynthesis protein
GOKDLDOB_00431 3.7e-94 mobA 2.7.7.77 H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
GOKDLDOB_00432 3e-44
GOKDLDOB_00433 2.2e-185 comP 2.7.13.3 F Sensor histidine kinase
GOKDLDOB_00434 9.8e-115 nreC K PFAM regulatory protein LuxR
GOKDLDOB_00435 7.2e-19
GOKDLDOB_00436 7.8e-177
GOKDLDOB_00437 4.8e-144 hepT 2.5.1.30, 2.5.1.90 H geranyltranstransferase activity
GOKDLDOB_00438 1.5e-217 narK P Transporter, major facilitator family protein
GOKDLDOB_00439 1.1e-31 moaD 2.8.1.12 H ThiS family
GOKDLDOB_00440 9.1e-63 moaE 2.8.1.12 H MoaE protein
GOKDLDOB_00441 1e-78 S Flavodoxin
GOKDLDOB_00442 5e-128 fecD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
GOKDLDOB_00443 1e-126 fecE 3.6.3.34 HP AAA domain, putative AbiEii toxin, Type IV TA system
GOKDLDOB_00444 7.7e-175 fecB P Periplasmic binding protein
GOKDLDOB_00445 5.5e-175
GOKDLDOB_00446 1.2e-76
GOKDLDOB_00447 5.4e-113 flp 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
GOKDLDOB_00448 0.0 S SEC-C Motif Domain Protein
GOKDLDOB_00449 1.2e-51
GOKDLDOB_00450 9.9e-141 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
GOKDLDOB_00451 1.1e-147 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
GOKDLDOB_00452 2.7e-117 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
GOKDLDOB_00453 1.6e-230 clcA_2 P Chloride transporter, ClC family
GOKDLDOB_00454 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
GOKDLDOB_00455 1.9e-110 lssY 3.6.1.27 I Acid phosphatase homologues
GOKDLDOB_00457 5.2e-50 rplU J This protein binds to 23S rRNA in the presence of protein L20
GOKDLDOB_00458 7.4e-55 ysxB J Cysteine protease Prp
GOKDLDOB_00459 2.1e-45 rpmA J Belongs to the bacterial ribosomal protein bL27 family
GOKDLDOB_00460 6.2e-131 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
GOKDLDOB_00461 3.5e-202 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
GOKDLDOB_00462 9.1e-116 J 2'-5' RNA ligase superfamily
GOKDLDOB_00463 1.5e-21 sprD D Domain of Unknown Function (DUF1542)
GOKDLDOB_00464 1.4e-249 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
GOKDLDOB_00465 1.3e-257 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
GOKDLDOB_00466 6.9e-172 L transposase, IS605 OrfB family
GOKDLDOB_00467 3.3e-160 xth 3.1.11.2 L exodeoxyribonuclease III
GOKDLDOB_00468 2.4e-53 S Mazg nucleotide pyrophosphohydrolase
GOKDLDOB_00469 5e-34
GOKDLDOB_00470 3.8e-284 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
GOKDLDOB_00471 6.3e-216 uhpT EGP Major facilitator Superfamily
GOKDLDOB_00472 1.9e-258 ytjP 3.5.1.18 E Dipeptidase
GOKDLDOB_00473 5.7e-275 arcD S C4-dicarboxylate anaerobic carrier
GOKDLDOB_00474 4.3e-180 yfeX P Peroxidase
GOKDLDOB_00475 2.6e-168 lsa S ABC transporter
GOKDLDOB_00476 7.2e-135 I alpha/beta hydrolase fold
GOKDLDOB_00477 6.1e-180 MA20_14895 S Conserved hypothetical protein 698
GOKDLDOB_00478 9.6e-240 G Belongs to the glycosyl hydrolase family 6
GOKDLDOB_00479 6.4e-96 S NADPH-dependent FMN reductase
GOKDLDOB_00480 2.2e-168 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
GOKDLDOB_00481 9.5e-180 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
GOKDLDOB_00482 3e-232 mntH P H( )-stimulated, divalent metal cation uptake system
GOKDLDOB_00483 7.9e-149 2.3.1.19 K Helix-turn-helix XRE-family like proteins
GOKDLDOB_00484 1.2e-261 araP U Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
GOKDLDOB_00485 0.0 araB 2.7.1.12, 2.7.1.16 G carbohydrate kinase FGGY
GOKDLDOB_00486 3.7e-139 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
GOKDLDOB_00487 4.4e-285 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
GOKDLDOB_00488 4.5e-100 maa 2.3.1.79 S Maltose O-acetyltransferase
GOKDLDOB_00489 4.6e-157 ytbE 1.1.1.346 S Aldo keto reductase
GOKDLDOB_00490 1.5e-208 araR K Transcriptional regulator
GOKDLDOB_00491 9.7e-83 usp6 T universal stress protein
GOKDLDOB_00492 1.7e-45
GOKDLDOB_00493 6.5e-243 rarA L recombination factor protein RarA
GOKDLDOB_00494 2.7e-85 yueI S Protein of unknown function (DUF1694)
GOKDLDOB_00495 1.5e-21
GOKDLDOB_00496 1.8e-74 4.4.1.5 E Glyoxalase
GOKDLDOB_00497 2.5e-138 S Membrane
GOKDLDOB_00498 2e-140 S Belongs to the UPF0246 family
GOKDLDOB_00499 0.0 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
GOKDLDOB_00500 1.3e-262 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
GOKDLDOB_00501 3.6e-231 pbuG S permease
GOKDLDOB_00502 2.9e-38 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
GOKDLDOB_00503 1.3e-62 gadB 4.1.1.15 E Belongs to the group II decarboxylase family
GOKDLDOB_00504 3.7e-36 L Transposase domain (DUF772)
GOKDLDOB_00505 4.8e-39 L Transposase
GOKDLDOB_00506 4.3e-112 L Transposase
GOKDLDOB_00507 1.1e-153 E Amino acid permease
GOKDLDOB_00508 0.0 4.1.1.25 E Pyridoxal-dependent decarboxylase conserved domain
GOKDLDOB_00509 5.3e-124 L PFAM Integrase catalytic region
GOKDLDOB_00510 7.5e-186 gadC E amino acid
GOKDLDOB_00511 3.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GOKDLDOB_00512 7.4e-239 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
GOKDLDOB_00513 2.5e-214 iscS2 2.8.1.7 E Aminotransferase class V
GOKDLDOB_00514 8.5e-229 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GOKDLDOB_00515 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
GOKDLDOB_00516 1.5e-272 cydA 1.10.3.14 C ubiquinol oxidase
GOKDLDOB_00517 2.6e-183 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
GOKDLDOB_00518 6.7e-309 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
GOKDLDOB_00519 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
GOKDLDOB_00520 2e-230 ndh 1.6.99.3 C NADH dehydrogenase
GOKDLDOB_00521 1.5e-247 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
GOKDLDOB_00522 6.8e-121 radC L DNA repair protein
GOKDLDOB_00523 1.7e-179 mreB D cell shape determining protein MreB
GOKDLDOB_00524 5.9e-152 mreC M Involved in formation and maintenance of cell shape
GOKDLDOB_00525 8.7e-93 mreD M rod shape-determining protein MreD
GOKDLDOB_00526 3.2e-102 glnP P ABC transporter permease
GOKDLDOB_00527 3.6e-117 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GOKDLDOB_00528 2.6e-160 aatB ET ABC transporter substrate-binding protein
GOKDLDOB_00529 7.8e-230 ymfF S Peptidase M16 inactive domain protein
GOKDLDOB_00530 3.5e-249 ymfH S Peptidase M16
GOKDLDOB_00531 4.8e-140 ymfM S Helix-turn-helix domain
GOKDLDOB_00532 2.5e-101 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GOKDLDOB_00533 1.1e-231 cinA 3.5.1.42 S Belongs to the CinA family
GOKDLDOB_00534 1.3e-196 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GOKDLDOB_00535 9.5e-209 rny S Endoribonuclease that initiates mRNA decay
GOKDLDOB_00536 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
GOKDLDOB_00537 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
GOKDLDOB_00538 8.7e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
GOKDLDOB_00539 3.4e-191 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
GOKDLDOB_00540 5.3e-190 tgt_1 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
GOKDLDOB_00541 2.8e-31 yajC U Preprotein translocase
GOKDLDOB_00542 1.2e-182 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
GOKDLDOB_00543 8.3e-233 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
GOKDLDOB_00544 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GOKDLDOB_00545 9.1e-43 yrzL S Belongs to the UPF0297 family
GOKDLDOB_00546 3.6e-76 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GOKDLDOB_00547 6.1e-48 yrzB S Belongs to the UPF0473 family
GOKDLDOB_00548 6.6e-85 cvpA S Colicin V production protein
GOKDLDOB_00549 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
GOKDLDOB_00550 6.1e-54 trxA O Belongs to the thioredoxin family
GOKDLDOB_00551 1e-96 yslB S Protein of unknown function (DUF2507)
GOKDLDOB_00552 4.4e-141 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
GOKDLDOB_00553 1.7e-102 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GOKDLDOB_00554 2e-94 S Phosphoesterase
GOKDLDOB_00555 5.7e-74 ykuL S (CBS) domain
GOKDLDOB_00556 2.3e-153 3.1.3.102, 3.1.3.104, 3.1.3.23 S haloacid dehalogenase-like hydrolase
GOKDLDOB_00557 5.8e-147 ykuT M mechanosensitive ion channel
GOKDLDOB_00558 6.5e-38 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
GOKDLDOB_00559 1.1e-27
GOKDLDOB_00560 3.2e-211 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
GOKDLDOB_00561 8.4e-182 ccpA K catabolite control protein A
GOKDLDOB_00562 1.7e-135
GOKDLDOB_00563 3.5e-132 yebC K Transcriptional regulatory protein
GOKDLDOB_00564 3.4e-180 comGA NU Type II IV secretion system protein
GOKDLDOB_00565 6e-183 comGB NU type II secretion system
GOKDLDOB_00566 7.1e-47 comGC U competence protein ComGC
GOKDLDOB_00567 9.2e-77 NU general secretion pathway protein
GOKDLDOB_00568 8.4e-42
GOKDLDOB_00569 4.9e-70
GOKDLDOB_00571 1.1e-144 ytxK 2.1.1.72 L N-6 DNA Methylase
GOKDLDOB_00572 2.2e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GOKDLDOB_00573 1e-113 S Calcineurin-like phosphoesterase
GOKDLDOB_00574 7.8e-94 yutD S Protein of unknown function (DUF1027)
GOKDLDOB_00575 1.1e-133 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
GOKDLDOB_00576 2.2e-106 S Protein of unknown function (DUF1461)
GOKDLDOB_00577 1.6e-109 dedA S SNARE-like domain protein
GOKDLDOB_00578 8.1e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GOKDLDOB_00579 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
GOKDLDOB_00580 9e-119 S Repeat protein
GOKDLDOB_00581 1.3e-122 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
GOKDLDOB_00582 1.8e-225 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
GOKDLDOB_00583 7.5e-58 XK27_04120 S Putative amino acid metabolism
GOKDLDOB_00584 7.1e-217 iscS 2.8.1.7 E Aminotransferase class V
GOKDLDOB_00585 2.2e-125 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GOKDLDOB_00587 4.1e-98 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
GOKDLDOB_00588 3.6e-31 cspA K Cold shock protein
GOKDLDOB_00589 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GOKDLDOB_00590 1.9e-42 divIVA D DivIVA domain protein
GOKDLDOB_00591 1.7e-145 ylmH S S4 domain protein
GOKDLDOB_00592 3.2e-40 yggT S YGGT family
GOKDLDOB_00593 9.4e-71 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
GOKDLDOB_00594 5.3e-226 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GOKDLDOB_00595 5.6e-253 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
GOKDLDOB_00596 3.9e-148 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
GOKDLDOB_00597 3e-204 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GOKDLDOB_00598 2.7e-263 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GOKDLDOB_00599 7.6e-180 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GOKDLDOB_00600 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
GOKDLDOB_00601 1.5e-56 ftsL D Cell division protein FtsL
GOKDLDOB_00602 2.7e-174 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
GOKDLDOB_00603 3.1e-77 mraZ K Belongs to the MraZ family
GOKDLDOB_00604 1.9e-56
GOKDLDOB_00605 1.2e-10 S Protein of unknown function (DUF4044)
GOKDLDOB_00606 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
GOKDLDOB_00607 1e-95 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
GOKDLDOB_00608 1.7e-159 rrmA 2.1.1.187 H Methyltransferase
GOKDLDOB_00609 2.5e-181 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
GOKDLDOB_00610 2.2e-31 L transposase and inactivated derivatives, IS30 family
GOKDLDOB_00611 1.3e-78 L PFAM Integrase catalytic region
GOKDLDOB_00612 3.1e-74 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
GOKDLDOB_00613 1e-145 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
GOKDLDOB_00615 7.8e-295 UW LPXTG-motif cell wall anchor domain protein
GOKDLDOB_00616 2.9e-171 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
GOKDLDOB_00617 7.4e-258 lysC 2.7.2.4 E Belongs to the aspartokinase family
GOKDLDOB_00618 5.1e-248 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
GOKDLDOB_00619 1.8e-74 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
GOKDLDOB_00620 1.5e-222 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
GOKDLDOB_00621 3.5e-174 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
GOKDLDOB_00622 4.7e-140 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
GOKDLDOB_00623 4.2e-217 patA 2.6.1.1 E Aminotransferase
GOKDLDOB_00624 9.7e-197 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GOKDLDOB_00625 8.5e-84 KT Putative sugar diacid recognition
GOKDLDOB_00626 1.7e-219 EG GntP family permease
GOKDLDOB_00627 6.6e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
GOKDLDOB_00628 7.7e-58
GOKDLDOB_00630 3e-132 mltD CBM50 M NlpC P60 family protein
GOKDLDOB_00631 5.7e-29
GOKDLDOB_00632 3.8e-184 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic
GOKDLDOB_00633 9.8e-32 ykzG S Belongs to the UPF0356 family
GOKDLDOB_00634 3.6e-82
GOKDLDOB_00635 3.7e-102 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GOKDLDOB_00636 2e-208 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
GOKDLDOB_00637 8.1e-182 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
GOKDLDOB_00638 6e-228 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
GOKDLDOB_00639 1.4e-275 lpdA 1.8.1.4 C Dehydrogenase
GOKDLDOB_00640 3.9e-47 yktA S Belongs to the UPF0223 family
GOKDLDOB_00641 2.4e-136 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
GOKDLDOB_00642 0.0 typA T GTP-binding protein TypA
GOKDLDOB_00643 1.2e-222 ftsW D Belongs to the SEDS family
GOKDLDOB_00644 3e-44 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
GOKDLDOB_00645 1.4e-98 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
GOKDLDOB_00646 5.1e-90 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GOKDLDOB_00647 6e-199 ylbL T Belongs to the peptidase S16 family
GOKDLDOB_00648 3.4e-80 comEA L Competence protein ComEA
GOKDLDOB_00649 1.2e-88 comEB 3.5.4.12 F ComE operon protein 2
GOKDLDOB_00650 0.0 comEC S Competence protein ComEC
GOKDLDOB_00651 7.6e-146 holA 2.7.7.7 L DNA polymerase III delta subunit
GOKDLDOB_00652 1.5e-158 htpX O Belongs to the peptidase M48B family
GOKDLDOB_00653 7e-93 lemA S LemA family
GOKDLDOB_00654 3.4e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
GOKDLDOB_00655 5.4e-121 pgm3 G Belongs to the phosphoglycerate mutase family
GOKDLDOB_00656 1.4e-161 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
GOKDLDOB_00657 3.4e-138 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GOKDLDOB_00658 1.4e-158 3.2.1.55 GH51 G Right handed beta helix region
GOKDLDOB_00659 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
GOKDLDOB_00660 1.5e-124 srtA 3.4.22.70 M sortase family
GOKDLDOB_00661 5.7e-166 S Alpha/beta hydrolase of unknown function (DUF915)
GOKDLDOB_00662 2.4e-237 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GOKDLDOB_00663 4.6e-41 rpmE2 J Ribosomal protein L31
GOKDLDOB_00664 2e-236 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GOKDLDOB_00665 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
GOKDLDOB_00666 8.8e-48 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
GOKDLDOB_00667 5.2e-53 ywiB S Domain of unknown function (DUF1934)
GOKDLDOB_00668 6.7e-153 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
GOKDLDOB_00669 1e-270 ywfO S HD domain protein
GOKDLDOB_00670 3.5e-146 yxeH S hydrolase
GOKDLDOB_00671 1.7e-203 rarA L recombination factor protein RarA
GOKDLDOB_00672 5.6e-50
GOKDLDOB_00673 1.1e-178 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GOKDLDOB_00674 2.2e-241 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GOKDLDOB_00675 6.9e-150 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
GOKDLDOB_00676 1.2e-119 znuB U ABC 3 transport family
GOKDLDOB_00677 7.7e-123 fhuC P ABC transporter
GOKDLDOB_00678 2.8e-168 znuA P Belongs to the bacterial solute-binding protein 9 family
GOKDLDOB_00679 7.6e-160 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
GOKDLDOB_00680 6.8e-37 veg S Biofilm formation stimulator VEG
GOKDLDOB_00681 9.5e-161 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
GOKDLDOB_00682 4.2e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
GOKDLDOB_00683 2.4e-155 tatD L hydrolase, TatD family
GOKDLDOB_00684 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GOKDLDOB_00685 5.8e-160 yunF F Protein of unknown function DUF72
GOKDLDOB_00687 2.7e-131 cobB K SIR2 family
GOKDLDOB_00688 1.3e-176
GOKDLDOB_00689 5.7e-228 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
GOKDLDOB_00690 6e-166 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
GOKDLDOB_00691 1.3e-190 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
GOKDLDOB_00692 5.5e-183 hpaIM 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
GOKDLDOB_00693 6.3e-81 ndk 2.7.4.6 F Belongs to the NDK family
GOKDLDOB_00694 0.0 helD 3.6.4.12 L DNA helicase
GOKDLDOB_00695 1.8e-204 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
GOKDLDOB_00696 5.6e-23
GOKDLDOB_00697 1.4e-64 ubiX 2.5.1.129 H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
GOKDLDOB_00698 1.3e-244 ubiX 2.5.1.129, 4.1.1.98 H 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
GOKDLDOB_00699 1.8e-47 K LysR substrate binding domain
GOKDLDOB_00701 1.5e-255 gabT 2.6.1.19 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
GOKDLDOB_00702 4e-265 yfnA E amino acid
GOKDLDOB_00703 8.4e-119 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GOKDLDOB_00704 1.9e-43 1.3.5.4 S FMN binding
GOKDLDOB_00705 1.3e-221 norA EGP Major facilitator Superfamily
GOKDLDOB_00706 2.3e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
GOKDLDOB_00707 2.6e-42 S Sugar efflux transporter for intercellular exchange
GOKDLDOB_00708 4e-156 scrK 2.7.1.2, 2.7.1.4 GK ROK family
GOKDLDOB_00709 2.8e-121 scrR3 K Transcriptional regulator, LacI family
GOKDLDOB_00710 2.8e-154 metQ1 P Belongs to the nlpA lipoprotein family
GOKDLDOB_00711 4.2e-192 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GOKDLDOB_00712 3.1e-103 metI P ABC transporter permease
GOKDLDOB_00713 5.7e-219 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
GOKDLDOB_00714 9.2e-253 clcA P chloride
GOKDLDOB_00715 9.6e-38 S Enoyl-(Acyl carrier protein) reductase
GOKDLDOB_00716 7.9e-21 S Protein conserved in bacteria
GOKDLDOB_00717 3.8e-64 ywrO S Flavodoxin-like fold
GOKDLDOB_00718 3.6e-29 S Uncharacterized protein conserved in bacteria (DUF2255)
GOKDLDOB_00719 7.3e-80 C Aldo keto reductase
GOKDLDOB_00720 4e-138 tas 1.1.1.65 C Aldo keto reductase
GOKDLDOB_00721 6e-21 S Uncharacterized protein conserved in bacteria (DUF2255)
GOKDLDOB_00722 9.3e-79 K LysR substrate binding domain protein
GOKDLDOB_00723 2e-79 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
GOKDLDOB_00724 9.6e-99 proW P ABC transporter, permease protein
GOKDLDOB_00725 4.2e-141 proV E ABC transporter, ATP-binding protein
GOKDLDOB_00726 3.7e-109 proWZ P ABC transporter permease
GOKDLDOB_00727 2.1e-160 proX M ABC transporter, substrate-binding protein, QAT family
GOKDLDOB_00728 8.6e-128 C Zinc-binding dehydrogenase
GOKDLDOB_00729 2.6e-43 S Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GOKDLDOB_00730 2.6e-74 K Transcriptional regulator
GOKDLDOB_00731 7.9e-157 1.6.5.2 GM NAD(P)H-binding
GOKDLDOB_00733 2.5e-44 L Transposase
GOKDLDOB_00734 2.7e-166 L Transposase
GOKDLDOB_00735 0.0 UW LPXTG-motif cell wall anchor domain protein
GOKDLDOB_00736 1.9e-166 L Transposase
GOKDLDOB_00737 1.5e-80 uspA T universal stress protein
GOKDLDOB_00738 1.5e-80 K AsnC family
GOKDLDOB_00739 1e-232 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
GOKDLDOB_00740 7e-99 dedA 3.1.3.1 S SNARE associated Golgi protein
GOKDLDOB_00741 1.2e-180 galR K Transcriptional regulator
GOKDLDOB_00742 2.4e-286 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
GOKDLDOB_00743 1.7e-226 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
GOKDLDOB_00744 3.4e-180 celE 3.2.1.4 GH5,GH9 E GDSL-like Lipase/Acylhydrolase family
GOKDLDOB_00745 4.4e-146 ptp3 3.1.3.48 T Tyrosine phosphatase family
GOKDLDOB_00746 1.1e-92 yxkA S Phosphatidylethanolamine-binding protein
GOKDLDOB_00747 9.1e-36
GOKDLDOB_00748 7.7e-52
GOKDLDOB_00749 1e-204
GOKDLDOB_00750 7.5e-83 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GOKDLDOB_00751 3.4e-135 pnuC H nicotinamide mononucleotide transporter
GOKDLDOB_00752 3.9e-156 ytbE 1.1.1.346 S Aldo keto reductase
GOKDLDOB_00753 9.8e-126 K response regulator
GOKDLDOB_00754 8.7e-184 T PhoQ Sensor
GOKDLDOB_00755 2.6e-135 macB2 V ABC transporter, ATP-binding protein
GOKDLDOB_00756 0.0 ysaB V FtsX-like permease family
GOKDLDOB_00757 9.1e-158 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
GOKDLDOB_00758 1.8e-167 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
GOKDLDOB_00759 2.1e-54 K helix_turn_helix, mercury resistance
GOKDLDOB_00760 4.9e-287 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOKDLDOB_00761 3.7e-197 EGP Major facilitator Superfamily
GOKDLDOB_00762 4.6e-88 ymdB S Macro domain protein
GOKDLDOB_00763 4.9e-111 K Helix-turn-helix domain
GOKDLDOB_00764 0.0 pepO 3.4.24.71 O Peptidase family M13
GOKDLDOB_00765 2.4e-172 L transposase, IS605 OrfB family
GOKDLDOB_00766 4.9e-240 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GOKDLDOB_00767 2.6e-165
GOKDLDOB_00768 5.1e-130 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GOKDLDOB_00769 1.1e-244 purD 6.3.4.13 F Belongs to the GARS family
GOKDLDOB_00770 2.5e-294 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
GOKDLDOB_00771 2.8e-105 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
GOKDLDOB_00772 1.8e-195 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
GOKDLDOB_00773 1.3e-276 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
GOKDLDOB_00774 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GOKDLDOB_00775 2.3e-127 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GOKDLDOB_00776 1.3e-38 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
GOKDLDOB_00777 8.2e-131 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
GOKDLDOB_00778 1.5e-252 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
GOKDLDOB_00779 1.6e-216 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
GOKDLDOB_00780 1.9e-83 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
GOKDLDOB_00781 6.9e-130 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
GOKDLDOB_00782 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
GOKDLDOB_00783 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
GOKDLDOB_00784 4.7e-172 K AI-2E family transporter
GOKDLDOB_00785 7.4e-230 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
GOKDLDOB_00786 2.8e-114 thiE 2.5.1.3, 2.7.6.2, 5.4.2.6 S Haloacid dehalogenase-like hydrolase
GOKDLDOB_00787 3.3e-115 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GOKDLDOB_00788 4.6e-129 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
GOKDLDOB_00789 8.6e-173 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
GOKDLDOB_00790 8.9e-245 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
GOKDLDOB_00791 8.6e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
GOKDLDOB_00792 3.9e-135 K LysR substrate binding domain
GOKDLDOB_00793 3.6e-52 azlD S branched-chain amino acid
GOKDLDOB_00794 1.9e-140 azlC E AzlC protein
GOKDLDOB_00795 1.8e-201 hpk31 2.7.13.3 T Histidine kinase
GOKDLDOB_00796 3.8e-125 K response regulator
GOKDLDOB_00797 4.1e-209 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GOKDLDOB_00798 1.3e-171 deoR K sugar-binding domain protein
GOKDLDOB_00799 1.1e-130 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
GOKDLDOB_00800 5.3e-237 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
GOKDLDOB_00801 1.8e-236 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
GOKDLDOB_00802 3.4e-118 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
GOKDLDOB_00803 4.5e-135 XK27_01040 S Protein of unknown function (DUF1129)
GOKDLDOB_00804 5.7e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
GOKDLDOB_00805 5.4e-32 yyzM S Bacterial protein of unknown function (DUF951)
GOKDLDOB_00806 6.5e-154 spo0J K Belongs to the ParB family
GOKDLDOB_00807 3.9e-139 soj D Sporulation initiation inhibitor
GOKDLDOB_00808 2.8e-150 noc K Belongs to the ParB family
GOKDLDOB_00809 1.5e-127 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
GOKDLDOB_00810 2.2e-162 fadB4 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
GOKDLDOB_00811 2.7e-171 rihC 3.2.2.1 F Nucleoside
GOKDLDOB_00812 1e-218 nupG F Nucleoside transporter
GOKDLDOB_00813 6.1e-220 cycA E Amino acid permease
GOKDLDOB_00814 1.4e-138 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GOKDLDOB_00815 1.8e-265 glnP P ABC transporter
GOKDLDOB_00816 1.4e-250 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GOKDLDOB_00817 3.7e-187 infB UW LPXTG-motif cell wall anchor domain protein
GOKDLDOB_00819 9.8e-169 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
GOKDLDOB_00820 6.9e-17 K Cro/C1-type HTH DNA-binding domain
GOKDLDOB_00821 5.3e-217 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
GOKDLDOB_00822 3e-47 gcvH E glycine cleavage
GOKDLDOB_00823 1.1e-220 rodA D Belongs to the SEDS family
GOKDLDOB_00824 1e-31 S Protein of unknown function (DUF2969)
GOKDLDOB_00825 4.4e-41 yidD S Could be involved in insertion of integral membrane proteins into the membrane
GOKDLDOB_00826 5.5e-178 mbl D Cell shape determining protein MreB Mrl
GOKDLDOB_00827 9.4e-242 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GOKDLDOB_00828 1.3e-33 ywzB S Protein of unknown function (DUF1146)
GOKDLDOB_00829 1e-67 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
GOKDLDOB_00830 1.1e-267 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GOKDLDOB_00831 1.9e-164 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GOKDLDOB_00832 1.5e-283 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GOKDLDOB_00833 5.1e-93 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GOKDLDOB_00834 1.1e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GOKDLDOB_00835 1.5e-14 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GOKDLDOB_00836 7.3e-124 atpB C it plays a direct role in the translocation of protons across the membrane
GOKDLDOB_00837 5.9e-233 pyrP F Permease
GOKDLDOB_00838 2e-130 yibF S overlaps another CDS with the same product name
GOKDLDOB_00839 8.1e-194 yibE S overlaps another CDS with the same product name
GOKDLDOB_00840 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GOKDLDOB_00841 6.6e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GOKDLDOB_00842 1.8e-231 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
GOKDLDOB_00843 5.2e-195 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
GOKDLDOB_00844 5e-167 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
GOKDLDOB_00845 1.2e-194 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GOKDLDOB_00846 6e-108 tdk 2.7.1.21 F thymidine kinase
GOKDLDOB_00847 8.9e-264 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain
GOKDLDOB_00848 1.1e-135 cobQ S CobB/CobQ-like glutamine amidotransferase domain
GOKDLDOB_00849 1.2e-221 arcD U Amino acid permease
GOKDLDOB_00850 7.5e-261 E Arginine ornithine antiporter
GOKDLDOB_00851 2.7e-79 argR K Regulates arginine biosynthesis genes
GOKDLDOB_00852 4.1e-239 arcA 3.5.3.6 E Arginine
GOKDLDOB_00853 8.2e-185 ampC V Beta-lactamase
GOKDLDOB_00854 7.7e-34
GOKDLDOB_00855 0.0 M domain protein
GOKDLDOB_00856 1.2e-91
GOKDLDOB_00858 4.4e-254 yjcE P Sodium proton antiporter
GOKDLDOB_00859 3.6e-57
GOKDLDOB_00861 2e-88
GOKDLDOB_00862 0.0 copA 3.6.3.54 P P-type ATPase
GOKDLDOB_00863 6.3e-50 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
GOKDLDOB_00864 8.7e-52 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
GOKDLDOB_00865 4.5e-103 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
GOKDLDOB_00866 4.7e-160 EG EamA-like transporter family
GOKDLDOB_00867 5.6e-172 arcC 2.7.2.2 E Belongs to the carbamate kinase family
GOKDLDOB_00868 5.8e-191 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
GOKDLDOB_00869 9.5e-155 KT YcbB domain
GOKDLDOB_00870 1.1e-30 xylB 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
GOKDLDOB_00872 2.7e-26
GOKDLDOB_00873 1.3e-262 pgi 5.3.1.9 G Belongs to the GPI family
GOKDLDOB_00874 1.5e-101 lacA 2.3.1.79 S Transferase hexapeptide repeat
GOKDLDOB_00875 2.4e-153 glcU U sugar transport
GOKDLDOB_00876 2.4e-273 yclK 2.7.13.3 T Histidine kinase
GOKDLDOB_00877 3e-133 K response regulator
GOKDLDOB_00879 3.4e-77 lytE M Lysin motif
GOKDLDOB_00880 3.7e-148 XK27_02985 S Cof-like hydrolase
GOKDLDOB_00881 8.6e-81 K Transcriptional regulator
GOKDLDOB_00882 0.0 oatA I Acyltransferase
GOKDLDOB_00883 8.7e-53
GOKDLDOB_00884 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
GOKDLDOB_00885 3.2e-253 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GOKDLDOB_00886 2e-126 ybbR S YbbR-like protein
GOKDLDOB_00887 5e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
GOKDLDOB_00888 1.2e-247 fucP G Major Facilitator Superfamily
GOKDLDOB_00889 1e-66 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
GOKDLDOB_00890 2.7e-166 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GOKDLDOB_00891 1.6e-168 murB 1.3.1.98 M Cell wall formation
GOKDLDOB_00892 6e-102 dnaQ 2.7.7.7 L DNA polymerase III
GOKDLDOB_00893 4.4e-76 S PAS domain
GOKDLDOB_00894 3e-87 K Acetyltransferase (GNAT) domain
GOKDLDOB_00895 2.2e-81 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
GOKDLDOB_00896 3.8e-179 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
GOKDLDOB_00897 6.2e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GOKDLDOB_00898 1.8e-104 yxjI
GOKDLDOB_00899 1.4e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
GOKDLDOB_00900 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
GOKDLDOB_00901 6.8e-147 est 3.1.1.1 S Serine aminopeptidase, S33
GOKDLDOB_00902 1.8e-34 secG U Preprotein translocase
GOKDLDOB_00903 3.1e-292 clcA P chloride
GOKDLDOB_00904 4.6e-247 yifK E Amino acid permease
GOKDLDOB_00905 4.2e-250 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GOKDLDOB_00906 4.8e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GOKDLDOB_00907 2.4e-228 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
GOKDLDOB_00908 1.1e-189 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
GOKDLDOB_00910 2.1e-103 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GOKDLDOB_00911 2.6e-242 glpT G Major Facilitator Superfamily
GOKDLDOB_00912 8.8e-15
GOKDLDOB_00914 4e-170 whiA K May be required for sporulation
GOKDLDOB_00915 6.5e-187 ybhK S Required for morphogenesis under gluconeogenic growth conditions
GOKDLDOB_00916 2.2e-162 rapZ S Displays ATPase and GTPase activities
GOKDLDOB_00917 2.4e-245 steT E amino acid
GOKDLDOB_00918 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
GOKDLDOB_00919 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
GOKDLDOB_00920 1.5e-13
GOKDLDOB_00921 2.3e-116 yfbR S HD containing hydrolase-like enzyme
GOKDLDOB_00922 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
GOKDLDOB_00923 3e-87 ykhA 3.1.2.20 I Thioesterase superfamily
GOKDLDOB_00924 1.4e-159 aatB ET PFAM extracellular solute-binding protein, family 3
GOKDLDOB_00925 4.9e-218 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
GOKDLDOB_00926 6.6e-173 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
GOKDLDOB_00927 5.4e-164 lutA C Cysteine-rich domain
GOKDLDOB_00928 5.8e-288 lutB C 4Fe-4S dicluster domain
GOKDLDOB_00929 5.1e-136 yrjD S LUD domain
GOKDLDOB_00930 1.1e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
GOKDLDOB_00931 1.5e-183 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
GOKDLDOB_00932 4.1e-158 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GOKDLDOB_00933 4.6e-177 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
GOKDLDOB_00934 4.9e-52 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
GOKDLDOB_00935 2.4e-32 KT PspC domain protein
GOKDLDOB_00936 5e-187 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
GOKDLDOB_00937 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GOKDLDOB_00938 3e-93 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GOKDLDOB_00939 4.6e-115 comFC S Competence protein
GOKDLDOB_00940 7.1e-253 comFA L Helicase C-terminal domain protein
GOKDLDOB_00941 2.5e-107 yvyE 3.4.13.9 S YigZ family
GOKDLDOB_00942 1.3e-24 yybR K transcriptional regulator
GOKDLDOB_00943 1.8e-39 C nitroreductase
GOKDLDOB_00944 3.3e-237 EGP Major facilitator Superfamily
GOKDLDOB_00945 3.3e-68 rmaI K Transcriptional regulator
GOKDLDOB_00946 7.8e-39
GOKDLDOB_00947 0.0 ydaO E amino acid
GOKDLDOB_00948 8.1e-304 ybeC E amino acid
GOKDLDOB_00949 1.8e-84 S Aminoacyl-tRNA editing domain
GOKDLDOB_00950 1.9e-292 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
GOKDLDOB_00951 1.1e-43 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GOKDLDOB_00953 8.2e-114 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
GOKDLDOB_00954 0.0 uup S ABC transporter, ATP-binding protein
GOKDLDOB_00955 3.3e-183 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GOKDLDOB_00956 4.5e-227 mtnE 2.6.1.83 E Aminotransferase
GOKDLDOB_00957 1.9e-141 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
GOKDLDOB_00958 3.8e-137 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
GOKDLDOB_00959 1.1e-226 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
GOKDLDOB_00960 3.6e-132 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GOKDLDOB_00961 4.2e-197 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GOKDLDOB_00962 1.5e-103 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
GOKDLDOB_00963 1.5e-124 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
GOKDLDOB_00964 1.5e-194 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
GOKDLDOB_00965 1.6e-174 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
GOKDLDOB_00966 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
GOKDLDOB_00967 9.1e-281 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
GOKDLDOB_00968 1.6e-137 fat 3.1.2.21 I Acyl-ACP thioesterase
GOKDLDOB_00969 1e-156 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GOKDLDOB_00970 1e-57 yabA L Involved in initiation control of chromosome replication
GOKDLDOB_00971 3.7e-185 holB 2.7.7.7 L DNA polymerase III
GOKDLDOB_00972 7.6e-52 yaaQ S Cyclic-di-AMP receptor
GOKDLDOB_00973 5.1e-116 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GOKDLDOB_00974 9.7e-39 S Protein of unknown function (DUF2508)
GOKDLDOB_00975 3.3e-109 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GOKDLDOB_00976 7e-47 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
GOKDLDOB_00977 6.6e-302 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GOKDLDOB_00978 2.3e-90 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
GOKDLDOB_00979 3.4e-35 nrdH O Glutaredoxin
GOKDLDOB_00980 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GOKDLDOB_00981 2.2e-198 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GOKDLDOB_00982 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
GOKDLDOB_00983 2.3e-131 S Putative adhesin
GOKDLDOB_00984 2.5e-72 XK27_06920 S Protein of unknown function (DUF1700)
GOKDLDOB_00985 2.4e-56 K transcriptional regulator PadR family
GOKDLDOB_00986 6.5e-39 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GOKDLDOB_00988 1.7e-47
GOKDLDOB_00989 3.2e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
GOKDLDOB_00990 1.7e-82 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GOKDLDOB_00991 2.2e-207 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
GOKDLDOB_00992 4e-245 M Glycosyl transferase family group 2
GOKDLDOB_00994 1.6e-227 aadAT EK Aminotransferase, class I
GOKDLDOB_00995 3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
GOKDLDOB_00996 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GOKDLDOB_00997 3.4e-97 nusG K Participates in transcription elongation, termination and antitermination
GOKDLDOB_00998 1.3e-254 S Uncharacterised protein family (UPF0236)
GOKDLDOB_00999 5.4e-98 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GOKDLDOB_01000 1.8e-123 Z012_01130 S Fic/DOC family
GOKDLDOB_01001 4.3e-158 S Polyphosphate nucleotide phosphotransferase, PPK2 family
GOKDLDOB_01002 8.5e-59
GOKDLDOB_01003 2.9e-205 yttB EGP Major facilitator Superfamily
GOKDLDOB_01004 4.5e-234 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
GOKDLDOB_01005 9.9e-74 rplI J Binds to the 23S rRNA
GOKDLDOB_01006 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
GOKDLDOB_01007 1.6e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GOKDLDOB_01008 2.2e-78 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
GOKDLDOB_01009 1.2e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
GOKDLDOB_01010 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GOKDLDOB_01011 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GOKDLDOB_01012 5.5e-206 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GOKDLDOB_01013 2.4e-33 yaaA S S4 domain protein YaaA
GOKDLDOB_01014 4.4e-125 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
GOKDLDOB_01015 8.5e-207 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
GOKDLDOB_01016 2.9e-251 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GOKDLDOB_01017 3.4e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
GOKDLDOB_01018 2e-58 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
GOKDLDOB_01019 1e-129 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GOKDLDOB_01020 4.6e-132 jag S R3H domain protein
GOKDLDOB_01021 2.5e-253 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
GOKDLDOB_01022 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
GOKDLDOB_01023 0.0 asnB 6.3.5.4 E Asparagine synthase
GOKDLDOB_01024 1.8e-292 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GOKDLDOB_01025 3.2e-247 yxbA 6.3.1.12 S ATP-grasp enzyme
GOKDLDOB_01026 1.7e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
GOKDLDOB_01027 5.9e-88 2.3.1.183 M Acetyltransferase GNAT family
GOKDLDOB_01028 1.6e-160 S reductase
GOKDLDOB_01030 4.3e-146 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GOKDLDOB_01031 4.6e-125 S Alpha/beta hydrolase of unknown function (DUF915)
GOKDLDOB_01032 2.7e-296 S amidohydrolase
GOKDLDOB_01033 3.6e-92 L PFAM Integrase catalytic region
GOKDLDOB_01034 1.1e-53 L PFAM Integrase catalytic region
GOKDLDOB_01035 0.0 ilvD 4.2.1.9 EG Belongs to the IlvD Edd family
GOKDLDOB_01036 1.2e-39 S Iron-sulfur cluster assembly protein
GOKDLDOB_01037 3e-155 yocS S SBF-like CPA transporter family (DUF4137)
GOKDLDOB_01039 4.1e-119 azlC E azaleucine resistance protein AzlC
GOKDLDOB_01040 7.1e-50 azlD E Branched-chain amino acid transport
GOKDLDOB_01041 8.3e-122 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
GOKDLDOB_01043 3.9e-48 K Helix-turn-helix domain
GOKDLDOB_01044 4.4e-69 S SnoaL-like polyketide cyclase
GOKDLDOB_01045 2.6e-116 1.3.1.9 S Nitronate monooxygenase
GOKDLDOB_01046 1.5e-123 rocF 3.5.3.1, 3.5.3.11 E Arginase family
GOKDLDOB_01047 2.1e-90 K Bacterial regulatory proteins, tetR family
GOKDLDOB_01048 7.6e-184 ybhR V ABC transporter
GOKDLDOB_01049 1.6e-124 ybhF_2 V AAA domain, putative AbiEii toxin, Type IV TA system
GOKDLDOB_01050 3.1e-118 S GyrI-like small molecule binding domain
GOKDLDOB_01051 1.2e-123 yhiD S MgtC family
GOKDLDOB_01052 3.2e-95 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
GOKDLDOB_01053 1e-195 V Beta-lactamase
GOKDLDOB_01054 8.8e-56 yphI 1.14.99.57 S Antibiotic biosynthesis monooxygenase
GOKDLDOB_01055 1.1e-89 XK27_08850 J Aminoacyl-tRNA editing domain
GOKDLDOB_01056 3.1e-19 relB L Addiction module antitoxin, RelB DinJ family
GOKDLDOB_01057 8e-25
GOKDLDOB_01058 1.7e-118 K LytTr DNA-binding domain
GOKDLDOB_01059 2.7e-206 2.7.13.3 T GHKL domain
GOKDLDOB_01063 1.8e-119 1.1.1.193, 3.5.4.26 H RibD C-terminal domain
GOKDLDOB_01064 1.5e-161 mleP3 S Membrane transport protein
GOKDLDOB_01065 7.1e-225 4.4.1.8 E Aminotransferase, class I
GOKDLDOB_01066 3.1e-97 M Protein of unknown function (DUF3737)
GOKDLDOB_01067 8.6e-56 yphJ 4.1.1.44 S decarboxylase
GOKDLDOB_01068 5.1e-167 S Oxidoreductase, aldo keto reductase family protein
GOKDLDOB_01069 6e-85 C Flavodoxin
GOKDLDOB_01070 3.6e-16
GOKDLDOB_01071 1.1e-150 K Transcriptional regulator
GOKDLDOB_01072 9.2e-87 lacA S transferase hexapeptide repeat
GOKDLDOB_01073 4.3e-135 S Hydrolases of the alpha beta superfamily
GOKDLDOB_01074 6.5e-151 S Alpha beta hydrolase
GOKDLDOB_01075 1.8e-93 padC Q Phenolic acid decarboxylase
GOKDLDOB_01076 1.9e-92 padR K Virulence activator alpha C-term
GOKDLDOB_01077 1.3e-65 GM NAD(P)H-binding
GOKDLDOB_01078 5.1e-155 ypuA S Protein of unknown function (DUF1002)
GOKDLDOB_01079 5.2e-184 ansA 3.5.1.1 EJ L-asparaginase, type I
GOKDLDOB_01080 6.7e-135 K Transcriptional regulator
GOKDLDOB_01081 1.4e-161 akr5f 1.1.1.346 S reductase
GOKDLDOB_01082 1.8e-104 K Transcriptional regulator C-terminal region
GOKDLDOB_01083 1.2e-187 S membrane
GOKDLDOB_01084 1.2e-112 GM NAD(P)H-binding
GOKDLDOB_01085 2.8e-63 yneR
GOKDLDOB_01086 2.2e-130 yfeJ 6.3.5.2 F glutamine amidotransferase
GOKDLDOB_01087 4.8e-143 T EAL domain
GOKDLDOB_01088 1.4e-253 pgaC GT2 M Glycosyl transferase
GOKDLDOB_01089 3.9e-87
GOKDLDOB_01090 9.1e-170 2.7.7.65 T GGDEF domain
GOKDLDOB_01091 1.1e-121 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
GOKDLDOB_01092 1.3e-256 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
GOKDLDOB_01093 8.4e-198 asnA 6.3.1.1 F aspartate--ammonia ligase
GOKDLDOB_01094 9e-93 folT S ECF transporter, substrate-specific component
GOKDLDOB_01095 0.0 pepN 3.4.11.2 E aminopeptidase
GOKDLDOB_01096 1.5e-112 ylbE GM NAD dependent epimerase dehydratase family protein
GOKDLDOB_01097 1.4e-256 pepC 3.4.22.40 E aminopeptidase
GOKDLDOB_01098 1e-210 EGP Major facilitator Superfamily
GOKDLDOB_01099 2.7e-236
GOKDLDOB_01100 1.8e-83 K Transcriptional regulator, HxlR family
GOKDLDOB_01101 6.3e-108 XK27_02070 S Nitroreductase family
GOKDLDOB_01102 7.3e-52 hxlR K Transcriptional regulator, HxlR family
GOKDLDOB_01103 7.8e-120 GM NmrA-like family
GOKDLDOB_01104 2.6e-217 L Integrase core domain
GOKDLDOB_01105 4.8e-126 O Bacterial dnaA protein
GOKDLDOB_01106 2.5e-126 F helicase superfamily c-terminal domain
GOKDLDOB_01107 3e-20 K Cro/C1-type HTH DNA-binding domain
GOKDLDOB_01108 3.6e-44
GOKDLDOB_01109 9.9e-162 L Restriction endonuclease FokI, C terminal
GOKDLDOB_01110 2.4e-196 dam 2.1.1.72 L D12 class N6 adenine-specific DNA methyltransferase
GOKDLDOB_01111 1.3e-43 K Bacterial regulatory proteins, tetR family
GOKDLDOB_01112 1.5e-213 norB EGP Major Facilitator
GOKDLDOB_01113 6.8e-61 yjdF S Protein of unknown function (DUF2992)
GOKDLDOB_01114 7.4e-64 K Psort location Cytoplasmic, score
GOKDLDOB_01115 1.7e-87 entB 3.5.1.19 Q Isochorismatase family
GOKDLDOB_01116 1.6e-91 K Bacterial regulatory proteins, tetR family
GOKDLDOB_01117 1.1e-104 1.6.5.2 S NADPH-dependent FMN reductase
GOKDLDOB_01118 2.5e-247 norB EGP Major Facilitator
GOKDLDOB_01119 1.5e-81 padR K Transcriptional regulator PadR-like family
GOKDLDOB_01121 5.1e-173 L Plasmid pRiA4b ORF-3-like protein
GOKDLDOB_01122 9.3e-61 XK27_04080 H Riboflavin biosynthesis protein RibD
GOKDLDOB_01123 6.6e-44 yafP 3.6.4.13 K Acetyltransferase (GNAT) domain
GOKDLDOB_01124 3.2e-24 S PFAM Archaeal ATPase
GOKDLDOB_01125 1.3e-46
GOKDLDOB_01128 2.7e-203 amtB P ammonium transporter
GOKDLDOB_01129 8.6e-251 gor 1.8.1.7 C pyridine nucleotide-disulfide oxidoreductase
GOKDLDOB_01130 3.1e-74 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
GOKDLDOB_01131 1e-145 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
GOKDLDOB_01132 4.8e-126 O Bacterial dnaA protein
GOKDLDOB_01133 2.6e-217 L Integrase core domain
GOKDLDOB_01134 3.9e-179 yagE E amino acid
GOKDLDOB_01135 3.4e-85 dps P Belongs to the Dps family
GOKDLDOB_01136 0.0 pacL 3.6.3.8 P P-type ATPase
GOKDLDOB_01137 2.3e-178 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
GOKDLDOB_01138 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
GOKDLDOB_01139 3.4e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
GOKDLDOB_01140 4.5e-146 potB P ABC transporter permease
GOKDLDOB_01141 4.9e-140 potC P ABC transporter permease
GOKDLDOB_01142 2.5e-208 potD P ABC transporter
GOKDLDOB_01143 1.1e-229
GOKDLDOB_01144 7.2e-234 EGP Sugar (and other) transporter
GOKDLDOB_01145 2.3e-254 yfnA E Amino Acid
GOKDLDOB_01146 6.9e-74 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
GOKDLDOB_01147 5.8e-103 gmk2 2.7.4.8 F Guanylate kinase
GOKDLDOB_01148 1.5e-82 zur P Belongs to the Fur family
GOKDLDOB_01149 3.1e-17 3.2.1.14 GH18
GOKDLDOB_01150 4.9e-151
GOKDLDOB_01151 4.4e-39 pspC KT PspC domain protein
GOKDLDOB_01152 1.6e-94 K Transcriptional regulator (TetR family)
GOKDLDOB_01153 2e-220 V domain protein
GOKDLDOB_01154 5e-182 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GOKDLDOB_01156 2e-31 S Transglycosylase associated protein
GOKDLDOB_01157 4.9e-227 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GOKDLDOB_01158 5.5e-126 3.1.3.73 G phosphoglycerate mutase
GOKDLDOB_01159 6.8e-116 dedA S SNARE associated Golgi protein
GOKDLDOB_01160 0.0 helD 3.6.4.12 L DNA helicase
GOKDLDOB_01161 1.3e-243 nox C NADH oxidase
GOKDLDOB_01162 4.5e-255 nox C NADH oxidase
GOKDLDOB_01163 3.5e-160 EG EamA-like transporter family
GOKDLDOB_01164 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GOKDLDOB_01165 4.8e-176 coaA 2.7.1.33 F Pantothenic acid kinase
GOKDLDOB_01166 1.6e-219 S cog cog1373
GOKDLDOB_01168 9.6e-302 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
GOKDLDOB_01169 2.4e-44 L Transposase
GOKDLDOB_01170 3e-23
GOKDLDOB_01171 1.4e-191
GOKDLDOB_01172 3.2e-30
GOKDLDOB_01173 9.8e-152 3.1.3.73 G Belongs to the phosphoglycerate mutase family
GOKDLDOB_01174 9.5e-124 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GOKDLDOB_01175 6.8e-104 fic D Fic/DOC family
GOKDLDOB_01176 7.3e-71
GOKDLDOB_01177 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
GOKDLDOB_01178 8.9e-95 L nuclease
GOKDLDOB_01180 0.0 sbcC L Putative exonuclease SbcCD, C subunit
GOKDLDOB_01181 8.4e-207 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
GOKDLDOB_01182 4.4e-177 M Glycosyl hydrolases family 25
GOKDLDOB_01183 3.1e-144 ywqE 3.1.3.48 GM PHP domain protein
GOKDLDOB_01184 0.0 snf 2.7.11.1 KL domain protein
GOKDLDOB_01186 1e-37
GOKDLDOB_01187 1.7e-66 T Toxin-antitoxin system, toxin component, MazF family
GOKDLDOB_01189 1.9e-62 mmuP E amino acid
GOKDLDOB_01190 6.8e-237 L Transposase
GOKDLDOB_01192 6.7e-107 wecD3 K PFAM GCN5-related N-acetyltransferase
GOKDLDOB_01193 3.1e-286 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GOKDLDOB_01194 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
GOKDLDOB_01195 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
GOKDLDOB_01196 3.3e-172 malR K Transcriptional regulator, LacI family
GOKDLDOB_01197 1.6e-211 phbA 2.3.1.9 I Belongs to the thiolase family
GOKDLDOB_01198 1.1e-256 malT G Major Facilitator
GOKDLDOB_01199 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
GOKDLDOB_01200 5.4e-121 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
GOKDLDOB_01201 2.7e-63
GOKDLDOB_01202 1.3e-87 2.7.6.5 T Region found in RelA / SpoT proteins
GOKDLDOB_01203 1.7e-114 K response regulator
GOKDLDOB_01204 1.5e-220 sptS 2.7.13.3 T Histidine kinase
GOKDLDOB_01205 1.8e-204 yfeO P Voltage gated chloride channel
GOKDLDOB_01206 1.1e-258 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
GOKDLDOB_01207 7.8e-137 puuD S peptidase C26
GOKDLDOB_01208 1.5e-166 yvgN C Aldo keto reductase
GOKDLDOB_01209 0.0 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
GOKDLDOB_01210 1.1e-86 hmpT S ECF-type riboflavin transporter, S component
GOKDLDOB_01211 7.1e-261 nox C NADH oxidase
GOKDLDOB_01212 1.6e-185 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GOKDLDOB_01213 5.3e-253 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GOKDLDOB_01214 8.8e-86
GOKDLDOB_01215 4.1e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GOKDLDOB_01217 9.9e-112 K Transcriptional regulator, TetR family
GOKDLDOB_01218 1e-69
GOKDLDOB_01219 8.1e-269 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
GOKDLDOB_01220 6.7e-268 tagE2 2.4.1.52 GT4 M Poly(Glycerol-phosphate) alpha-glucosyltransferase
GOKDLDOB_01221 5.3e-280 M domain protein
GOKDLDOB_01222 0.0 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
GOKDLDOB_01223 1.4e-264 G Major Facilitator
GOKDLDOB_01224 6.6e-96 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
GOKDLDOB_01225 7.6e-09
GOKDLDOB_01226 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
GOKDLDOB_01227 3.3e-247 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GOKDLDOB_01228 1.3e-176 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
GOKDLDOB_01229 6.5e-156 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
GOKDLDOB_01230 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
GOKDLDOB_01231 2.7e-91 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GOKDLDOB_01232 2.5e-88
GOKDLDOB_01234 4.3e-126 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GOKDLDOB_01235 9.9e-211 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
GOKDLDOB_01236 5.5e-115 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GOKDLDOB_01237 1.3e-35 ynzC S UPF0291 protein
GOKDLDOB_01238 9.8e-30 yneF S Uncharacterised protein family (UPF0154)
GOKDLDOB_01239 1.6e-117 plsC 2.3.1.51 I Acyltransferase
GOKDLDOB_01240 7e-141 yabB 2.1.1.223 L Methyltransferase small domain
GOKDLDOB_01241 1.6e-48 yazA L GIY-YIG catalytic domain protein
GOKDLDOB_01242 1.1e-181 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GOKDLDOB_01243 1.2e-143 rpsB J Belongs to the universal ribosomal protein uS2 family
GOKDLDOB_01244 2.4e-153 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GOKDLDOB_01245 2e-129 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
GOKDLDOB_01246 4.8e-94 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
GOKDLDOB_01247 2.1e-60 L PFAM transposase IS200-family protein
GOKDLDOB_01248 2.5e-230 L transposase, IS605 OrfB family
GOKDLDOB_01249 9.3e-141 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GOKDLDOB_01250 5.8e-138 cdsA 2.7.7.41 I Belongs to the CDS family
GOKDLDOB_01251 1.7e-235 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
GOKDLDOB_01252 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
GOKDLDOB_01253 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GOKDLDOB_01254 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
GOKDLDOB_01255 1e-215 nusA K Participates in both transcription termination and antitermination
GOKDLDOB_01256 1e-44 ylxR K Protein of unknown function (DUF448)
GOKDLDOB_01257 3.8e-48 ylxQ J ribosomal protein
GOKDLDOB_01258 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GOKDLDOB_01259 2.1e-58 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GOKDLDOB_01260 1.8e-167 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GOKDLDOB_01261 1.2e-177 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
GOKDLDOB_01262 2e-64
GOKDLDOB_01263 1.8e-195 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
GOKDLDOB_01264 2.7e-76 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GOKDLDOB_01265 0.0 dnaK O Heat shock 70 kDa protein
GOKDLDOB_01266 5.1e-199 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
GOKDLDOB_01267 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
GOKDLDOB_01268 3.9e-223 3.6.4.12 L Belongs to the 'phage' integrase family
GOKDLDOB_01269 4.4e-08 2.1.1.72 V Restriction endonuclease
GOKDLDOB_01271 4.7e-76
GOKDLDOB_01272 2.2e-81
GOKDLDOB_01273 1.1e-27 3.4.21.88 K Peptidase S24-like
GOKDLDOB_01275 2.8e-276 pipD E Dipeptidase
GOKDLDOB_01276 3.6e-199 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
GOKDLDOB_01277 2.3e-173 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
GOKDLDOB_01279 2.8e-57
GOKDLDOB_01280 1.7e-176 prmA J Ribosomal protein L11 methyltransferase
GOKDLDOB_01281 1.9e-130 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
GOKDLDOB_01282 2.3e-51
GOKDLDOB_01283 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GOKDLDOB_01284 5.4e-77 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GOKDLDOB_01285 1.1e-166 yniA G Phosphotransferase enzyme family
GOKDLDOB_01286 6.6e-96 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
GOKDLDOB_01287 7.7e-130 ponA V Beta-lactamase enzyme family
GOKDLDOB_01288 1.5e-220 dacA 3.4.16.4 M Belongs to the peptidase S11 family
GOKDLDOB_01289 6.7e-75
GOKDLDOB_01290 5.4e-200 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
GOKDLDOB_01291 5.8e-22
GOKDLDOB_01294 7.6e-266 S Uncharacterized protein conserved in bacteria (DUF2252)
GOKDLDOB_01295 2.6e-299 L PFAM plasmid pRiA4b ORF-3 family protein
GOKDLDOB_01296 5.1e-206 adhA 1.1.1.1 C Zinc-binding alcohol dehydrogenase family protein
GOKDLDOB_01297 1e-110 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GOKDLDOB_01298 8.2e-157 mleR K LysR family
GOKDLDOB_01299 4.8e-304 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
GOKDLDOB_01300 2.1e-260 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
GOKDLDOB_01301 1.8e-267 frdC 1.3.5.4 C FAD binding domain
GOKDLDOB_01302 7e-251 yflS P Sodium:sulfate symporter transmembrane region
GOKDLDOB_01303 1.4e-159 mleR K LysR family
GOKDLDOB_01304 9.4e-253 yjjP S Putative threonine/serine exporter
GOKDLDOB_01305 9.5e-118 ung2 3.2.2.27 L Uracil-DNA glycosylase
GOKDLDOB_01306 1.5e-275 emrY EGP Major facilitator Superfamily
GOKDLDOB_01307 8.5e-187 I Alpha beta
GOKDLDOB_01308 2.8e-93 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
GOKDLDOB_01309 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
GOKDLDOB_01311 1.8e-164 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
GOKDLDOB_01312 6e-121 S Domain of unknown function (DUF4811)
GOKDLDOB_01313 7.2e-270 lmrB EGP Major facilitator Superfamily
GOKDLDOB_01314 4.9e-73 merR K MerR HTH family regulatory protein
GOKDLDOB_01315 6.7e-54
GOKDLDOB_01316 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GOKDLDOB_01317 1.7e-218 S CAAX protease self-immunity
GOKDLDOB_01318 1.4e-108 glnP P ABC transporter permease
GOKDLDOB_01319 3.2e-110 gluC P ABC transporter permease
GOKDLDOB_01320 6.7e-153 glnH ET ABC transporter
GOKDLDOB_01321 6.9e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GOKDLDOB_01322 2.7e-82 usp1 T Belongs to the universal stress protein A family
GOKDLDOB_01323 2.2e-109 S VIT family
GOKDLDOB_01324 2.5e-116 S membrane
GOKDLDOB_01325 3.5e-166 czcD P cation diffusion facilitator family transporter
GOKDLDOB_01326 4.8e-125 sirR K iron dependent repressor
GOKDLDOB_01327 1e-30 cspC K Cold shock protein
GOKDLDOB_01328 6.8e-128 thrE S Putative threonine/serine exporter
GOKDLDOB_01329 2.1e-82 S Threonine/Serine exporter, ThrE
GOKDLDOB_01330 2.3e-119 lssY 3.6.1.27 I phosphatase
GOKDLDOB_01331 1.4e-11 2.3.1.128 J Acetyltransferase (GNAT) domain
GOKDLDOB_01332 2.3e-276 lysP E amino acid
GOKDLDOB_01333 2.8e-114 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
GOKDLDOB_01339 4.3e-57 sip L Belongs to the 'phage' integrase family
GOKDLDOB_01340 4.4e-11 K transcriptional
GOKDLDOB_01341 1.2e-12 S Helix-turn-helix domain
GOKDLDOB_01343 9.7e-33 L DnaD domain protein
GOKDLDOB_01347 8.8e-181 S Hydrolases of the alpha beta superfamily
GOKDLDOB_01348 3.6e-196 adhP 1.1.1.1 C alcohol dehydrogenase
GOKDLDOB_01349 1.3e-76 ctsR K Belongs to the CtsR family
GOKDLDOB_01350 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GOKDLDOB_01351 1e-110 K Bacterial regulatory proteins, tetR family
GOKDLDOB_01352 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GOKDLDOB_01353 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GOKDLDOB_01354 1.8e-199 ykiI
GOKDLDOB_01355 6.3e-117 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
GOKDLDOB_01356 3.9e-72 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GOKDLDOB_01357 2.4e-83 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
GOKDLDOB_01358 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GOKDLDOB_01359 3.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
GOKDLDOB_01360 1.5e-118 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GOKDLDOB_01361 1.6e-106 rplD J Forms part of the polypeptide exit tunnel
GOKDLDOB_01362 5.7e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
GOKDLDOB_01363 4.2e-150 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GOKDLDOB_01364 1.4e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GOKDLDOB_01365 2.8e-52 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GOKDLDOB_01366 6.1e-112 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GOKDLDOB_01367 3.5e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GOKDLDOB_01368 8.4e-28 rpmC J Belongs to the universal ribosomal protein uL29 family
GOKDLDOB_01369 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GOKDLDOB_01370 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GOKDLDOB_01371 2.6e-49 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GOKDLDOB_01372 1.4e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GOKDLDOB_01373 4e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GOKDLDOB_01374 1.3e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GOKDLDOB_01375 3.2e-95 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GOKDLDOB_01376 6.6e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GOKDLDOB_01377 2.2e-85 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GOKDLDOB_01378 2.9e-24 rpmD J Ribosomal protein L30
GOKDLDOB_01379 8.9e-64 rplO J Binds to the 23S rRNA
GOKDLDOB_01380 8.8e-240 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
GOKDLDOB_01381 8.1e-125 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
GOKDLDOB_01382 1.2e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GOKDLDOB_01383 1.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
GOKDLDOB_01384 4.7e-58 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GOKDLDOB_01385 2.3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GOKDLDOB_01386 2.8e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GOKDLDOB_01387 1.1e-62 rplQ J Ribosomal protein L17
GOKDLDOB_01388 1.5e-144 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GOKDLDOB_01389 1.4e-153 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GOKDLDOB_01390 1.2e-141 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GOKDLDOB_01391 6.5e-142 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
GOKDLDOB_01392 4.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GOKDLDOB_01393 5.6e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
GOKDLDOB_01394 9.4e-141 IQ reductase
GOKDLDOB_01395 1e-113 acmC 3.2.1.96 NU mannosyl-glycoprotein
GOKDLDOB_01396 1.3e-99 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
GOKDLDOB_01397 1.6e-213 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
GOKDLDOB_01398 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
GOKDLDOB_01399 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GOKDLDOB_01400 1.2e-202 camS S sex pheromone
GOKDLDOB_01401 2.4e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GOKDLDOB_01402 2e-277 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
GOKDLDOB_01403 1.8e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GOKDLDOB_01404 4.6e-188 yegS 2.7.1.107 G Lipid kinase
GOKDLDOB_01405 2.2e-262 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GOKDLDOB_01407 5.4e-22 draG 3.2.2.24 O PFAM ADP-ribosylation Crystallin J1
GOKDLDOB_01408 5.5e-72 K DNA-templated transcription, initiation
GOKDLDOB_01409 3.4e-18 S Domain of unknown function (DUF1837)
GOKDLDOB_01410 2.6e-217 L Integrase core domain
GOKDLDOB_01411 4.8e-126 O Bacterial dnaA protein
GOKDLDOB_01412 8.8e-240 acm2 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
GOKDLDOB_01413 4.1e-50 czrA K Transcriptional regulator, ArsR family
GOKDLDOB_01414 1e-37
GOKDLDOB_01415 0.0 yhcA V ABC transporter, ATP-binding protein
GOKDLDOB_01416 3.1e-119 devA 3.6.3.25 V ABC transporter, ATP-binding protein
GOKDLDOB_01417 7.5e-173 hrtB V ABC transporter permease
GOKDLDOB_01418 7.5e-86 ygfC K transcriptional regulator (TetR family)
GOKDLDOB_01419 9.9e-191 tdh 1.1.1.14 E Alcohol dehydrogenase GroES-like domain
GOKDLDOB_01420 3.9e-290 mntH P H( )-stimulated, divalent metal cation uptake system
GOKDLDOB_01421 6.1e-35
GOKDLDOB_01422 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GOKDLDOB_01424 1.2e-227 yxiO S Vacuole effluxer Atg22 like
GOKDLDOB_01425 1.9e-261 npp S type I phosphodiesterase nucleotide pyrophosphatase
GOKDLDOB_01426 2.9e-241 E amino acid
GOKDLDOB_01427 1.4e-181 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
GOKDLDOB_01429 3.5e-28 WQ51_00220 K Helix-turn-helix XRE-family like proteins
GOKDLDOB_01430 3.5e-12 S Protein of unknown function (DUF3278)
GOKDLDOB_01431 3.9e-220 yxjG_1 E methionine synthase, vitamin-B12 independent
GOKDLDOB_01432 1.6e-41 S Cytochrome B5
GOKDLDOB_01433 7e-09 S Cytochrome B5
GOKDLDOB_01434 2.4e-39 S Cytochrome B5
GOKDLDOB_01435 1.4e-77 elaA S Gnat family
GOKDLDOB_01436 4.4e-188 L PFAM Integrase catalytic region
GOKDLDOB_01437 1.6e-218 uxaC 5.3.1.12 G glucuronate isomerase
GOKDLDOB_01438 5e-135 kduI 5.3.1.17 G Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
GOKDLDOB_01439 1e-129 IQ Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
GOKDLDOB_01440 9.4e-69 K Bacterial transcriptional regulator
GOKDLDOB_01441 1e-159 K LysR substrate binding domain protein
GOKDLDOB_01442 8.5e-84 C Flavodoxin
GOKDLDOB_01443 1e-80 yphH S Cupin domain
GOKDLDOB_01444 4.5e-74 yeaL S UPF0756 membrane protein
GOKDLDOB_01445 5.6e-245 EGP Major facilitator Superfamily
GOKDLDOB_01446 1.3e-218 5.4.2.7 G Metalloenzyme superfamily
GOKDLDOB_01447 0.0 cadA P P-type ATPase
GOKDLDOB_01448 5.8e-124 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
GOKDLDOB_01449 2.1e-126
GOKDLDOB_01450 1.8e-53 S Sugar efflux transporter for intercellular exchange
GOKDLDOB_01451 1.2e-244 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
GOKDLDOB_01453 0.0 L Helicase C-terminal domain protein
GOKDLDOB_01454 1.7e-74 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I PAP2 superfamily
GOKDLDOB_01455 4.8e-179 S Aldo keto reductase
GOKDLDOB_01456 0.0 rafA 3.2.1.22 G alpha-galactosidase
GOKDLDOB_01457 5.4e-86 S Membrane
GOKDLDOB_01458 9.7e-144 K helix_turn_helix, arabinose operon control protein
GOKDLDOB_01460 1.8e-139 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GOKDLDOB_01461 5.9e-62 psiE S Phosphate-starvation-inducible E
GOKDLDOB_01462 5.7e-100 ydeN S Serine hydrolase
GOKDLDOB_01464 1.6e-183 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
GOKDLDOB_01465 3e-254 nhaC C Na H antiporter NhaC
GOKDLDOB_01466 1.2e-38 S Cytochrome b5-like Heme/Steroid binding domain
GOKDLDOB_01467 2.2e-114 ywnB S NAD(P)H-binding
GOKDLDOB_01468 2.9e-37
GOKDLDOB_01469 7.9e-129 IQ Dehydrogenase reductase
GOKDLDOB_01470 2.6e-08
GOKDLDOB_01471 6.2e-44
GOKDLDOB_01472 1.6e-53 L Transposase
GOKDLDOB_01473 9e-37 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
GOKDLDOB_01474 9.4e-39 trxA O Belongs to the thioredoxin family
GOKDLDOB_01476 5.1e-95 frnE Q dithiol-disulfide isomerase involved in polyketide biosynthesis
GOKDLDOB_01477 1.6e-139 trxB 1.8.1.9 O Glucose inhibited division protein A
GOKDLDOB_01478 2.8e-24 CO cell redox homeostasis
GOKDLDOB_01479 1.4e-70 M1-798 K Rhodanese Homology Domain
GOKDLDOB_01480 6.4e-193 L Transposase IS66 family
GOKDLDOB_01484 3.3e-40
GOKDLDOB_01485 1e-43
GOKDLDOB_01486 4.3e-214 folP 2.5.1.15 H dihydropteroate synthase
GOKDLDOB_01487 1.2e-103 xtp 2.5.1.15, 3.6.1.66 F Ham1 family
GOKDLDOB_01488 7.2e-231 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
GOKDLDOB_01489 6.2e-105 folE 2.7.6.3, 3.5.4.16 F GTP cyclohydrolase 1
GOKDLDOB_01490 7e-92 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
GOKDLDOB_01491 5.3e-56 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
GOKDLDOB_01492 1.3e-72
GOKDLDOB_01493 5.6e-17 L Belongs to the 'phage' integrase family
GOKDLDOB_01494 1.5e-42 S Domain of unknown function DUF1829
GOKDLDOB_01495 4.4e-23
GOKDLDOB_01496 1.2e-21 L nuclease
GOKDLDOB_01497 1e-10 K sequence-specific DNA binding
GOKDLDOB_01498 1.2e-12
GOKDLDOB_01500 6.8e-19 L Phage regulatory protein
GOKDLDOB_01504 1.9e-43
GOKDLDOB_01505 3.2e-116 S CAAX protease self-immunity
GOKDLDOB_01506 6.9e-31
GOKDLDOB_01507 4.4e-161 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GOKDLDOB_01508 6.3e-185 rbsR K Periplasmic binding proteins and sugar binding domain of LacI family
GOKDLDOB_01509 7.2e-112
GOKDLDOB_01510 5e-116 dck 2.7.1.74 F deoxynucleoside kinase
GOKDLDOB_01511 2.8e-180 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
GOKDLDOB_01512 5.6e-86 uspA T Belongs to the universal stress protein A family
GOKDLDOB_01513 4.8e-276 pepV 3.5.1.18 E dipeptidase PepV
GOKDLDOB_01514 2.4e-153 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GOKDLDOB_01517 1.7e-09
GOKDLDOB_01518 1.2e-18 K Cro/C1-type HTH DNA-binding domain
GOKDLDOB_01520 5.4e-29
GOKDLDOB_01521 2e-29
GOKDLDOB_01522 6e-302 ytgP S Polysaccharide biosynthesis protein
GOKDLDOB_01523 1.7e-41
GOKDLDOB_01524 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
GOKDLDOB_01525 5.6e-217 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GOKDLDOB_01526 4.5e-97 tag 3.2.2.20 L glycosylase
GOKDLDOB_01527 4.2e-259 EGP Major facilitator Superfamily
GOKDLDOB_01528 4.3e-85 perR P Belongs to the Fur family
GOKDLDOB_01529 1.7e-230 cycA E Amino acid permease
GOKDLDOB_01530 6.3e-102 V VanZ like family
GOKDLDOB_01531 1e-23
GOKDLDOB_01532 7.7e-86 S Short repeat of unknown function (DUF308)
GOKDLDOB_01533 1.5e-79 S Psort location Cytoplasmic, score
GOKDLDOB_01534 5.1e-284 dinB 2.7.7.7 L impB/mucB/samB family C-terminal domain
GOKDLDOB_01535 2.4e-77 hsp O Belongs to the small heat shock protein (HSP20) family
GOKDLDOB_01536 6.9e-153 yeaE S Aldo keto
GOKDLDOB_01537 9e-237 preA 1.3.1.1 C 4Fe-4S dicluster domain
GOKDLDOB_01538 9.5e-236 preT 1.3.1.1 E Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
GOKDLDOB_01539 7.1e-149 xth 3.1.11.2 L exodeoxyribonuclease III
GOKDLDOB_01540 1.1e-87 lytE M LysM domain protein
GOKDLDOB_01541 0.0 oppD EP Psort location Cytoplasmic, score
GOKDLDOB_01542 3.5e-42 lytE M LysM domain protein
GOKDLDOB_01543 1.2e-160 sufD O Uncharacterized protein family (UPF0051)
GOKDLDOB_01544 9e-112 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GOKDLDOB_01545 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
GOKDLDOB_01546 6.7e-238 lmrB EGP Major facilitator Superfamily
GOKDLDOB_01547 1.4e-98 2.3.1.128 K Acetyltransferase (GNAT) domain
GOKDLDOB_01558 1.4e-72 K helix_turn_helix multiple antibiotic resistance protein
GOKDLDOB_01559 2.4e-311 lmrA 3.6.3.44 V ABC transporter
GOKDLDOB_01561 3.1e-130 K response regulator
GOKDLDOB_01562 0.0 vicK 2.7.13.3 T Histidine kinase
GOKDLDOB_01563 2.1e-249 yycH S YycH protein
GOKDLDOB_01564 5.4e-150 yycI S YycH protein
GOKDLDOB_01565 4.5e-154 vicX 3.1.26.11 S domain protein
GOKDLDOB_01566 1.6e-217 htrA 3.4.21.107 O serine protease
GOKDLDOB_01567 1.6e-88 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
GOKDLDOB_01568 1.5e-178 ABC-SBP S ABC transporter
GOKDLDOB_01569 2.6e-86 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GOKDLDOB_01571 9.2e-95 S reductase
GOKDLDOB_01572 6.5e-226 dhaT 1.1.1.1, 1.1.1.202 C Dehydrogenase
GOKDLDOB_01573 4.4e-146 E Glyoxalase-like domain
GOKDLDOB_01574 6e-146 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
GOKDLDOB_01575 1.2e-258 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
GOKDLDOB_01576 1.7e-143 bacG M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
GOKDLDOB_01577 2.6e-129 V ABC transporter
GOKDLDOB_01578 3.1e-218 bacI V MacB-like periplasmic core domain
GOKDLDOB_01581 1.4e-15 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
GOKDLDOB_01582 1.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
GOKDLDOB_01583 4.7e-137 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GOKDLDOB_01584 7.2e-71 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
GOKDLDOB_01585 1.9e-272 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
GOKDLDOB_01586 6.5e-207 yacL S domain protein
GOKDLDOB_01587 1e-254 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GOKDLDOB_01588 4.7e-99 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
GOKDLDOB_01589 3.8e-50 HA62_12640 S GCN5-related N-acetyl-transferase
GOKDLDOB_01590 2.9e-125 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GOKDLDOB_01591 3.9e-267 pepC 3.4.22.40 E Peptidase C1-like family
GOKDLDOB_01592 5.3e-139 tcyA ET Belongs to the bacterial solute-binding protein 3 family
GOKDLDOB_01593 4.4e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GOKDLDOB_01594 1.1e-119 tcyB E ABC transporter
GOKDLDOB_01595 7.7e-216 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
GOKDLDOB_01596 3.1e-169 I alpha/beta hydrolase fold
GOKDLDOB_01597 1.2e-134 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GOKDLDOB_01598 0.0 S Bacterial membrane protein, YfhO
GOKDLDOB_01599 8.5e-184 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
GOKDLDOB_01600 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
GOKDLDOB_01602 3.3e-85 ydcK S Belongs to the SprT family
GOKDLDOB_01603 0.0 yhgF K Tex-like protein N-terminal domain protein
GOKDLDOB_01604 4.4e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
GOKDLDOB_01605 3.8e-284 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GOKDLDOB_01606 1.8e-127 gntR1 K UbiC transcription regulator-associated domain protein
GOKDLDOB_01607 3.4e-129 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
GOKDLDOB_01608 6.3e-296 aspT P Predicted Permease Membrane Region
GOKDLDOB_01609 1.7e-249 EGP Major facilitator Superfamily
GOKDLDOB_01610 1.5e-115
GOKDLDOB_01613 4e-153 yjjH S Calcineurin-like phosphoesterase
GOKDLDOB_01614 1.3e-263 dtpT U amino acid peptide transporter
GOKDLDOB_01615 3.7e-19
GOKDLDOB_01619 5.7e-172 scrR K Transcriptional regulator, LacI family
GOKDLDOB_01620 1e-24
GOKDLDOB_01621 7.1e-107
GOKDLDOB_01622 8.9e-215 yttB EGP Major facilitator Superfamily
GOKDLDOB_01623 5.2e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
GOKDLDOB_01624 5e-87
GOKDLDOB_01625 7.8e-109 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
GOKDLDOB_01626 2.7e-263 S Putative peptidoglycan binding domain
GOKDLDOB_01627 1.4e-124 yciB M ErfK YbiS YcfS YnhG
GOKDLDOB_01629 6.5e-102
GOKDLDOB_01630 8.7e-218 dacA 3.4.16.4 M Belongs to the peptidase S11 family
GOKDLDOB_01631 3.6e-125 S Alpha beta hydrolase
GOKDLDOB_01632 8.4e-207 gldA 1.1.1.6 C dehydrogenase
GOKDLDOB_01633 4.3e-132 ydiN G Major Facilitator Superfamily
GOKDLDOB_01634 3.9e-127 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
GOKDLDOB_01635 6.5e-54 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
GOKDLDOB_01636 2.9e-12 ydiN 5.4.99.5 G Major Facilitator
GOKDLDOB_01637 8.6e-162 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
GOKDLDOB_01638 3.8e-35
GOKDLDOB_01639 2.2e-158 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
GOKDLDOB_01640 3.5e-109 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
GOKDLDOB_01641 3.4e-35 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
GOKDLDOB_01642 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GOKDLDOB_01643 6.4e-41
GOKDLDOB_01644 5.5e-126 pgm3 3.1.3.73 G phosphoglycerate mutase family
GOKDLDOB_01645 5.3e-284 S C4-dicarboxylate anaerobic carrier
GOKDLDOB_01646 5.7e-253 nhaC C Na H antiporter NhaC
GOKDLDOB_01647 1.9e-242 pbuX F xanthine permease
GOKDLDOB_01648 9.2e-283 pipD E Dipeptidase
GOKDLDOB_01649 9.7e-169 corA P CorA-like Mg2+ transporter protein
GOKDLDOB_01650 2e-166 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GOKDLDOB_01651 2.3e-131 terC P membrane
GOKDLDOB_01652 7.2e-55 trxA O Belongs to the thioredoxin family
GOKDLDOB_01653 6.4e-238 mepA V MATE efflux family protein
GOKDLDOB_01654 1e-93 M domain protein
GOKDLDOB_01655 2.2e-54 K Transcriptional regulator, ArsR family
GOKDLDOB_01656 8.2e-94 P Cadmium resistance transporter
GOKDLDOB_01657 8.2e-137 XK27_08845 S ABC transporter, ATP-binding protein
GOKDLDOB_01658 8.6e-154 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
GOKDLDOB_01659 4.9e-182 ABC-SBP S ABC transporter
GOKDLDOB_01660 2.2e-73 M PFAM NLP P60 protein
GOKDLDOB_01662 7.8e-14 relB L RelB antitoxin
GOKDLDOB_01663 1e-108 S Protein of unknown function (DUF3278)
GOKDLDOB_01665 2.9e-11
GOKDLDOB_01666 4.9e-274 S ABC transporter, ATP-binding protein
GOKDLDOB_01667 1.1e-144 S Putative ABC-transporter type IV
GOKDLDOB_01668 2e-106 NU mannosyl-glycoprotein
GOKDLDOB_01669 2.4e-248 brnQ U Component of the transport system for branched-chain amino acids
GOKDLDOB_01670 4.6e-230 S Uncharacterized protein conserved in bacteria (DUF2325)
GOKDLDOB_01671 5.8e-205 nrnB S DHHA1 domain
GOKDLDOB_01673 1.7e-12 K Helix-turn-helix domain
GOKDLDOB_01677 1.1e-49
GOKDLDOB_01678 7.3e-136 2.1.1.72 D peptidase
GOKDLDOB_01679 3.3e-18 S Domain of unknown function (DUF4767)
GOKDLDOB_01680 3.6e-54
GOKDLDOB_01681 2.1e-115 yrkL S Flavodoxin-like fold
GOKDLDOB_01683 1.4e-65 yeaO S Protein of unknown function, DUF488
GOKDLDOB_01684 1.2e-120 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
GOKDLDOB_01685 6.8e-204 3.1.3.1 S associated with various cellular activities
GOKDLDOB_01686 2.2e-235 S Putative metallopeptidase domain
GOKDLDOB_01687 4.6e-48
GOKDLDOB_01688 2.4e-44 L Transposase
GOKDLDOB_01689 1.6e-166 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
GOKDLDOB_01690 5.3e-150 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
GOKDLDOB_01691 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
GOKDLDOB_01692 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
GOKDLDOB_01693 3.5e-40 yheA S Belongs to the UPF0342 family
GOKDLDOB_01694 1.6e-219 yhaO L Ser Thr phosphatase family protein
GOKDLDOB_01695 0.0 L AAA domain
GOKDLDOB_01696 3.4e-129 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
GOKDLDOB_01698 8.3e-78 hit FG histidine triad
GOKDLDOB_01699 6e-137 ecsA V ABC transporter, ATP-binding protein
GOKDLDOB_01700 1.5e-217 ecsB U ABC transporter
GOKDLDOB_01701 3.1e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
GOKDLDOB_01702 0.0 2.1.1.72, 3.1.21.3 AA10,CBM73 L Belongs to the N(4) N(6)-methyltransferase family
GOKDLDOB_01703 1.2e-261 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
GOKDLDOB_01704 1e-184 iolS C Aldo keto reductase
GOKDLDOB_01705 1.7e-168 glsA 3.5.1.2 E Belongs to the glutaminase family
GOKDLDOB_01706 7.5e-58 ytzB S Small secreted protein
GOKDLDOB_01707 1.8e-237 L Transposase
GOKDLDOB_01708 0.0 trxB2 1.8.1.9 C Thioredoxin domain
GOKDLDOB_01709 1.2e-105 ahpC 1.11.1.15 O Peroxiredoxin
GOKDLDOB_01710 3.8e-138 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
GOKDLDOB_01711 6.6e-119 sdaAB 4.3.1.17 E Serine dehydratase beta chain
GOKDLDOB_01713 7e-43 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GOKDLDOB_01714 9.3e-166 T Calcineurin-like phosphoesterase superfamily domain
GOKDLDOB_01715 7e-223 mdtG EGP Major facilitator Superfamily
GOKDLDOB_01716 7.5e-129 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
GOKDLDOB_01717 5.5e-222 yxjG_1 E methionine synthase, vitamin-B12 independent
GOKDLDOB_01718 1.5e-143 XK27_00940 1.2.1.70, 3.5.1.9 S Putative cyclase
GOKDLDOB_01719 7.5e-158 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
GOKDLDOB_01720 2.9e-179 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GOKDLDOB_01721 0.0 lacZ 3.2.1.23 G -beta-galactosidase
GOKDLDOB_01722 0.0 lacS G Transporter
GOKDLDOB_01723 1.6e-188 lacR K Transcriptional regulator
GOKDLDOB_01724 1.5e-83
GOKDLDOB_01725 3.5e-97 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
GOKDLDOB_01726 3.7e-188 L Transposase
GOKDLDOB_01727 4e-96 L Transposase
GOKDLDOB_01728 1.4e-272 pipD E Dipeptidase
GOKDLDOB_01729 2.5e-311 yjbQ P TrkA C-terminal domain protein
GOKDLDOB_01730 2.7e-25 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
GOKDLDOB_01731 2.7e-293 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
GOKDLDOB_01732 8.4e-90
GOKDLDOB_01733 4.3e-36
GOKDLDOB_01734 3e-99 K DNA-templated transcription, initiation
GOKDLDOB_01735 2e-124
GOKDLDOB_01736 2.3e-66 K Transcriptional regulator, HxlR family
GOKDLDOB_01737 9.9e-167 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GOKDLDOB_01738 5.1e-143 epsB M biosynthesis protein
GOKDLDOB_01739 2.4e-117 ywqD 2.7.10.1 D Capsular exopolysaccharide family
GOKDLDOB_01740 1.2e-51 pglC M Bacterial sugar transferase
GOKDLDOB_01741 5.4e-75 wceM M Glycosyltransferase like family 2
GOKDLDOB_01742 1.4e-76 glfT1 1.1.1.133 S Glycosyltransferase like family 2
GOKDLDOB_01743 9.3e-97 M Glycosyltransferase, group 1 family protein
GOKDLDOB_01744 1.1e-59 M Domain of unknown function (DUF4422)
GOKDLDOB_01745 1.6e-31
GOKDLDOB_01746 9.2e-214 glf 5.4.99.9 M UDP-galactopyranose mutase
GOKDLDOB_01747 1.1e-155 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
GOKDLDOB_01748 5.9e-62 L Psort location Cytoplasmic, score
GOKDLDOB_01749 1.6e-14
GOKDLDOB_01751 2.8e-12
GOKDLDOB_01752 2.7e-136 L the current gene model (or a revised gene model) may contain a
GOKDLDOB_01753 3.7e-188 L Transposase
GOKDLDOB_01754 4.8e-219 sprD D Domain of Unknown Function (DUF1542)
GOKDLDOB_01755 0.0 sprD D Domain of Unknown Function (DUF1542)
GOKDLDOB_01756 9e-167 glsA 3.5.1.2 E Belongs to the glutaminase family
GOKDLDOB_01757 1.4e-253 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
GOKDLDOB_01758 2.8e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GOKDLDOB_01759 3e-234 dltB M MBOAT, membrane-bound O-acyltransferase family
GOKDLDOB_01760 1e-295 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GOKDLDOB_01762 2.2e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
GOKDLDOB_01763 9.6e-211 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GOKDLDOB_01764 3.2e-62 L Toxic component of a toxin-antitoxin (TA) module
GOKDLDOB_01765 7.5e-250 U Belongs to the purine-cytosine permease (2.A.39) family
GOKDLDOB_01766 6.1e-243 codA 3.5.4.1 F cytosine deaminase
GOKDLDOB_01767 3.4e-146 tesE Q hydratase
GOKDLDOB_01768 1.8e-113 S (CBS) domain
GOKDLDOB_01769 3.3e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
GOKDLDOB_01770 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GOKDLDOB_01771 2.1e-39 yabO J S4 domain protein
GOKDLDOB_01772 5.6e-56 divIC D Septum formation initiator
GOKDLDOB_01773 9.5e-65 yabR J RNA binding
GOKDLDOB_01774 4.2e-256 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
GOKDLDOB_01775 1.5e-97 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
GOKDLDOB_01776 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GOKDLDOB_01777 5.2e-170 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
GOKDLDOB_01778 2.2e-190 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GOKDLDOB_01779 1e-292 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
GOKDLDOB_01780 8.3e-88
GOKDLDOB_01781 7.1e-222 arcT 2.6.1.1 E Aminotransferase
GOKDLDOB_01782 1e-257 E Arginine ornithine antiporter
GOKDLDOB_01783 9e-281 yjeM E Amino Acid
GOKDLDOB_01784 1.6e-152 yihY S Belongs to the UPF0761 family
GOKDLDOB_01785 6.6e-34 S Protein of unknown function (DUF2922)
GOKDLDOB_01786 3.2e-30
GOKDLDOB_01787 6.5e-137 recX 2.4.1.337 GT4 S Regulatory protein RecX
GOKDLDOB_01788 5.7e-146 cps1D M Domain of unknown function (DUF4422)
GOKDLDOB_01789 5.9e-174 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
GOKDLDOB_01790 1.7e-119 rfbP 2.7.8.6 M Bacterial sugar transferase
GOKDLDOB_01791 8e-86 cps3F
GOKDLDOB_01792 2.8e-45 ywqC M biosynthesis protein
GOKDLDOB_01793 6.8e-209 glf 5.4.99.9 M UDP-galactopyranose mutase
GOKDLDOB_01794 3.5e-242 rfbX S Membrane protein involved in the export of O-antigen and teichoic acid
GOKDLDOB_01795 1.9e-144 waaB GT4 M Glycosyl transferases group 1
GOKDLDOB_01796 4.4e-138 M transferase activity, transferring glycosyl groups
GOKDLDOB_01797 8.4e-148 S enterobacterial common antigen metabolic process
GOKDLDOB_01798 2.4e-95 acmD M repeat protein
GOKDLDOB_01799 9.9e-46 M KxYKxGKxW signal domain protein
GOKDLDOB_01800 1.7e-105 M repeat protein
GOKDLDOB_01801 1.9e-24
GOKDLDOB_01802 8e-51 S Peptidase_C39 like family
GOKDLDOB_01803 5.1e-28 S Acyltransferase family
GOKDLDOB_01804 2.8e-108 S Psort location CytoplasmicMembrane, score
GOKDLDOB_01805 5e-82 ubiA H UbiA prenyltransferase family
GOKDLDOB_01806 1.5e-103 M Glycosyltransferase like family 2
GOKDLDOB_01807 1e-74 S Psort location CytoplasmicMembrane, score
GOKDLDOB_01808 4.9e-81 S Psort location CytoplasmicMembrane, score
GOKDLDOB_01809 4.2e-43 cotH M CotH kinase protein
GOKDLDOB_01810 3e-47 S dextransucrase activity
GOKDLDOB_01811 1.5e-160 yueF S AI-2E family transporter
GOKDLDOB_01812 2.9e-165 S Psort location CytoplasmicMembrane, score
GOKDLDOB_01813 2.9e-231 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GOKDLDOB_01814 2.8e-309 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
GOKDLDOB_01815 0.0 M NlpC/P60 family
GOKDLDOB_01817 9.3e-65 gntR1 K Transcriptional regulator, GntR family
GOKDLDOB_01818 8.6e-159 V ABC transporter, ATP-binding protein
GOKDLDOB_01819 6.2e-112
GOKDLDOB_01820 8e-142 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G MucBP domain
GOKDLDOB_01821 2.2e-100 S Pfam:DUF3816
GOKDLDOB_01822 0.0 clpE O Belongs to the ClpA ClpB family
GOKDLDOB_01823 8.3e-27
GOKDLDOB_01824 2.7e-39 ptsH G phosphocarrier protein HPR
GOKDLDOB_01825 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GOKDLDOB_01826 8.5e-229 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
GOKDLDOB_01827 5.9e-199 cpoA GT4 M Glycosyltransferase, group 1 family protein
GOKDLDOB_01828 2.5e-178 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
GOKDLDOB_01829 1.5e-39 ykuJ S Protein of unknown function (DUF1797)
GOKDLDOB_01830 1.4e-63 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
GOKDLDOB_01831 6.8e-262 yfnA E amino acid
GOKDLDOB_01832 9.9e-143 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
GOKDLDOB_01833 6.9e-92 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GOKDLDOB_01834 2e-39 ylqC S Belongs to the UPF0109 family
GOKDLDOB_01835 2.2e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
GOKDLDOB_01836 1e-249 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GOKDLDOB_01837 8.3e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
GOKDLDOB_01838 4.1e-180 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
GOKDLDOB_01839 0.0 smc D Required for chromosome condensation and partitioning
GOKDLDOB_01840 4.2e-132 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
GOKDLDOB_01841 2.9e-38 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
GOKDLDOB_01842 1.8e-187 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
GOKDLDOB_01843 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
GOKDLDOB_01844 0.0 yloV S DAK2 domain fusion protein YloV
GOKDLDOB_01845 4.7e-58 asp S Asp23 family, cell envelope-related function
GOKDLDOB_01846 7e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
GOKDLDOB_01847 3.1e-121 thiN 2.7.6.2 H thiamine pyrophosphokinase
GOKDLDOB_01848 1.5e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
GOKDLDOB_01849 8.2e-165 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
GOKDLDOB_01850 0.0 KLT serine threonine protein kinase
GOKDLDOB_01851 1.1e-130 stp 3.1.3.16 T phosphatase
GOKDLDOB_01852 2e-247 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
GOKDLDOB_01853 9.4e-175 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GOKDLDOB_01854 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GOKDLDOB_01855 5.3e-215 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GOKDLDOB_01856 7.7e-32 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
GOKDLDOB_01857 4.2e-115 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
GOKDLDOB_01858 4.9e-54
GOKDLDOB_01859 3.3e-263 recN L May be involved in recombinational repair of damaged DNA
GOKDLDOB_01860 1.1e-77 argR K Regulates arginine biosynthesis genes
GOKDLDOB_01861 1.1e-150 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
GOKDLDOB_01862 6.6e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GOKDLDOB_01863 1.5e-43 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GOKDLDOB_01864 4.2e-237 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GOKDLDOB_01865 4.2e-150 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GOKDLDOB_01866 2.7e-70 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GOKDLDOB_01867 2.2e-70 yqhY S Asp23 family, cell envelope-related function
GOKDLDOB_01868 2.3e-30 S Protein of unknown function (DUF2929)
GOKDLDOB_01869 1e-237 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
GOKDLDOB_01870 4.6e-154 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
GOKDLDOB_01871 8.4e-128 trmK 2.1.1.217 S SAM-dependent methyltransferase
GOKDLDOB_01872 4.8e-221 patA 2.6.1.1 E Aminotransferase
GOKDLDOB_01873 1.7e-207 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
GOKDLDOB_01874 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
GOKDLDOB_01875 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
GOKDLDOB_01876 9e-181 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
GOKDLDOB_01877 2.6e-146 recO L Involved in DNA repair and RecF pathway recombination
GOKDLDOB_01878 8.7e-170 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GOKDLDOB_01879 1.5e-62 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
GOKDLDOB_01880 2.1e-82 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GOKDLDOB_01881 6.9e-184 phoH T phosphate starvation-inducible protein PhoH
GOKDLDOB_01882 1.2e-177 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
GOKDLDOB_01883 9.6e-82 bioY S BioY family
GOKDLDOB_01884 1.7e-262 argH 4.3.2.1 E argininosuccinate lyase
GOKDLDOB_01885 1.3e-237 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
GOKDLDOB_01886 1.5e-183 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GOKDLDOB_01887 2.1e-68 yqeY S YqeY-like protein
GOKDLDOB_01888 1.2e-23 rpsU J Belongs to the bacterial ribosomal protein bS21 family
GOKDLDOB_01889 8.2e-266 glnPH2 P ABC transporter permease
GOKDLDOB_01890 1.8e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GOKDLDOB_01891 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
GOKDLDOB_01911 1.8e-76 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
GOKDLDOB_01912 3.6e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
GOKDLDOB_01913 3.2e-121 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
GOKDLDOB_01914 1.2e-202 coiA 3.6.4.12 S Competence protein
GOKDLDOB_01915 2.5e-74 pipD E Dipeptidase
GOKDLDOB_01916 4.1e-164 pipD E Dipeptidase
GOKDLDOB_01917 4.7e-114 yjbH Q Thioredoxin
GOKDLDOB_01918 5.2e-116 yjbM 2.7.6.5 S RelA SpoT domain protein
GOKDLDOB_01919 1.7e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GOKDLDOB_01920 5.8e-174 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
GOKDLDOB_01921 6.1e-60 MA20_27270 S mazG nucleotide pyrophosphohydrolase
GOKDLDOB_01922 3.6e-108 engB D Necessary for normal cell division and for the maintenance of normal septation
GOKDLDOB_01923 6.2e-235 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GOKDLDOB_01924 6.3e-238 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
GOKDLDOB_01925 3.8e-226 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GOKDLDOB_01926 3e-162 S Tetratricopeptide repeat
GOKDLDOB_01927 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GOKDLDOB_01928 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GOKDLDOB_01929 5.1e-35 rpsT J Binds directly to 16S ribosomal RNA
GOKDLDOB_01930 1.4e-306 L Transposase
GOKDLDOB_01931 2.6e-166 L Transposase
GOKDLDOB_01932 6.4e-162 degV S EDD domain protein, DegV family
GOKDLDOB_01933 0.0 FbpA K Fibronectin-binding protein
GOKDLDOB_01934 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
GOKDLDOB_01935 2.1e-207 carA 6.3.5.5 F Belongs to the CarA family
GOKDLDOB_01936 4.8e-176 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GOKDLDOB_01937 2.2e-73 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GOKDLDOB_01938 1.5e-65 esbA S Family of unknown function (DUF5322)
GOKDLDOB_01939 3.4e-70 rnhA 3.1.26.4 L Ribonuclease HI
GOKDLDOB_01940 1e-223 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
GOKDLDOB_01941 1.2e-82 F Belongs to the NrdI family
GOKDLDOB_01942 1.7e-44 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
GOKDLDOB_01943 8.9e-104 ypsA S Belongs to the UPF0398 family
GOKDLDOB_01944 7.5e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
GOKDLDOB_01945 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
GOKDLDOB_01946 1.4e-162 EG EamA-like transporter family
GOKDLDOB_01947 8.6e-125 dnaD L DnaD domain protein
GOKDLDOB_01948 2.2e-85 ypmB S Protein conserved in bacteria
GOKDLDOB_01949 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
GOKDLDOB_01950 2.2e-171 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
GOKDLDOB_01951 9.3e-162 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
GOKDLDOB_01952 4.2e-214 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
GOKDLDOB_01953 1.7e-193 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
GOKDLDOB_01954 3.8e-87 S Protein of unknown function (DUF1440)
GOKDLDOB_01955 0.0 rafA 3.2.1.22 G alpha-galactosidase
GOKDLDOB_01956 4.1e-192 galR K Periplasmic binding protein-like domain
GOKDLDOB_01957 2.1e-168 scrK 2.7.1.2, 2.7.1.4 GK ROK family
GOKDLDOB_01958 8.4e-179 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
GOKDLDOB_01959 2.6e-124 lrgB M LrgB-like family
GOKDLDOB_01960 1.9e-66 lrgA S LrgA family
GOKDLDOB_01961 3.2e-130 lytT K response regulator receiver
GOKDLDOB_01962 0.0 lytS 2.7.13.3 T LytS YhcK-type transmembrane receptor domain protein
GOKDLDOB_01963 4e-148 f42a O Band 7 protein
GOKDLDOB_01964 6.5e-262 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
GOKDLDOB_01965 5.8e-157 yitU 3.1.3.104 S hydrolase
GOKDLDOB_01966 9.2e-39 S Cytochrome B5
GOKDLDOB_01967 4e-116 nreC K PFAM regulatory protein LuxR
GOKDLDOB_01968 1.5e-161 hipB K Helix-turn-helix
GOKDLDOB_01969 2.8e-57 yitW S Iron-sulfur cluster assembly protein
GOKDLDOB_01970 1.2e-271 sufB O assembly protein SufB
GOKDLDOB_01971 6.5e-81 nifU C SUF system FeS assembly protein, NifU family
GOKDLDOB_01972 5.8e-233 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
GOKDLDOB_01973 4e-237 sufD O FeS assembly protein SufD
GOKDLDOB_01974 6.5e-145 sufC O FeS assembly ATPase SufC
GOKDLDOB_01975 1.2e-31 feoA P FeoA domain
GOKDLDOB_01976 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
GOKDLDOB_01977 2.4e-74
GOKDLDOB_01978 2.3e-119 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
GOKDLDOB_01979 3.8e-159 gspA M family 8
GOKDLDOB_01980 1.2e-160 S Alpha beta hydrolase
GOKDLDOB_01981 2.4e-95 K Acetyltransferase (GNAT) domain
GOKDLDOB_01982 3.9e-243 XK27_08635 S UPF0210 protein
GOKDLDOB_01983 2.1e-39 gcvR T Belongs to the UPF0237 family
GOKDLDOB_01984 1.9e-169 1.1.1.346 C Aldo keto reductase
GOKDLDOB_01985 1.6e-95 exuR K Periplasmic binding protein domain
GOKDLDOB_01986 1e-220 yjmB G MFS/sugar transport protein
GOKDLDOB_01987 1.9e-227 uxaC 5.3.1.12 G glucuronate isomerase
GOKDLDOB_01988 2.7e-94 S module of peptide synthetase
GOKDLDOB_01990 1.8e-150 uxaB 1.1.1.17, 1.1.1.58 G tagaturonate reductase activity
GOKDLDOB_01991 6e-128 uxaA 4.2.1.7, 4.4.1.24 G Altronate
GOKDLDOB_01992 1.8e-68 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
GOKDLDOB_01993 2.1e-160 uxaA 4.2.1.7, 4.4.1.24 G Altronate
GOKDLDOB_01994 2.1e-124 kdgK 2.7.1.45 G pfkB family carbohydrate kinase
GOKDLDOB_01995 1.5e-52 kdgR K FCD domain
GOKDLDOB_01996 2.4e-210 mtlD 1.1.1.17, 1.1.1.57 G Mannitol dehydrogenase C-terminal domain
GOKDLDOB_01997 4.7e-181 uxuA 4.2.1.8 G Catalyzes the dehydration of D-mannonate
GOKDLDOB_01998 2.7e-159 gntP EG GntP family permease
GOKDLDOB_01999 1.9e-52 L Helix-turn-helix domain
GOKDLDOB_02000 8.1e-151 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
GOKDLDOB_02001 1.5e-242 yagE E amino acid
GOKDLDOB_02002 2.9e-139 aroD S Serine hydrolase (FSH1)
GOKDLDOB_02003 4.8e-241 brnQ U Component of the transport system for branched-chain amino acids
GOKDLDOB_02004 4e-167 GK ROK family
GOKDLDOB_02005 0.0 tetP J elongation factor G
GOKDLDOB_02006 5.1e-81 uspA T universal stress protein
GOKDLDOB_02007 3.9e-195 lplA 6.3.1.20 H Lipoate-protein ligase
GOKDLDOB_02008 7.1e-63
GOKDLDOB_02009 5.2e-14
GOKDLDOB_02010 3.3e-108
GOKDLDOB_02011 6.1e-136 V ABC transporter
GOKDLDOB_02012 3.1e-212 EGP Major facilitator Superfamily
GOKDLDOB_02013 1.2e-255 G PTS system Galactitol-specific IIC component
GOKDLDOB_02014 1.1e-178 1.6.5.5 C Zinc-binding dehydrogenase
GOKDLDOB_02015 5.3e-161
GOKDLDOB_02016 1e-72 K Transcriptional regulator
GOKDLDOB_02017 2.7e-185 D Alpha beta
GOKDLDOB_02018 1.4e-51 ypaA S Protein of unknown function (DUF1304)
GOKDLDOB_02019 0.0 yjcE P Sodium proton antiporter
GOKDLDOB_02020 1.6e-52 yvlA
GOKDLDOB_02021 2.2e-114 P Cobalt transport protein
GOKDLDOB_02022 4.9e-249 cbiO1 S ABC transporter, ATP-binding protein
GOKDLDOB_02023 4.6e-97 S ABC-type cobalt transport system, permease component
GOKDLDOB_02024 1.3e-132 S membrane transporter protein
GOKDLDOB_02025 2.5e-138 IQ KR domain
GOKDLDOB_02026 3.1e-74 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
GOKDLDOB_02027 1e-145 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
GOKDLDOB_02028 4.8e-91 S B3 4 domain
GOKDLDOB_02029 4.5e-89
GOKDLDOB_02030 4.4e-123 pnb C nitroreductase
GOKDLDOB_02031 2.3e-68 ogt 2.1.1.63 L Methyltransferase
GOKDLDOB_02032 6.6e-78 tlpA2 L Transposase IS200 like
GOKDLDOB_02033 4.9e-232 L transposase, IS605 OrfB family
GOKDLDOB_02034 1.3e-66 XK27_00915 C Luciferase-like monooxygenase
GOKDLDOB_02035 1.4e-154 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
GOKDLDOB_02036 1e-67 S Protein of unknown function (DUF3021)
GOKDLDOB_02037 5.4e-77 K LytTr DNA-binding domain
GOKDLDOB_02038 2.4e-92 K Acetyltransferase (GNAT) family
GOKDLDOB_02039 3.7e-22
GOKDLDOB_02040 8.4e-120 ybhL S Belongs to the BI1 family
GOKDLDOB_02041 1.3e-81 yjcF 3.5.4.33, 4.4.1.8 K protein acetylation
GOKDLDOB_02042 1.6e-193 S Protein of unknown function (DUF3114)
GOKDLDOB_02043 4.1e-297 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
GOKDLDOB_02044 3.5e-166 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
GOKDLDOB_02045 5.1e-107 yvdD 3.2.2.10 S Belongs to the LOG family
GOKDLDOB_02046 9.1e-62 S Domain of unknown function (DUF4828)
GOKDLDOB_02047 1.4e-189 mocA S Oxidoreductase
GOKDLDOB_02048 3.9e-232 yfmL L DEAD DEAH box helicase
GOKDLDOB_02050 1.3e-207 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
GOKDLDOB_02051 4.2e-56
GOKDLDOB_02052 1.9e-74 gtcA S Teichoic acid glycosylation protein
GOKDLDOB_02053 6.1e-79 fld C Flavodoxin
GOKDLDOB_02054 1.7e-167 map 3.4.11.18 E Methionine Aminopeptidase
GOKDLDOB_02055 3.2e-121 L hmm pf00665

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)