ORF_ID e_value Gene_name EC_number CAZy COGs Description
NMCIJIJD_00001 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
NMCIJIJD_00002 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NMCIJIJD_00003 1.8e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
NMCIJIJD_00004 2e-191 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
NMCIJIJD_00005 3.5e-202 tgt_1 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
NMCIJIJD_00006 2.2e-96 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NMCIJIJD_00018 7e-89 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
NMCIJIJD_00019 1.5e-74 L PFAM Integrase catalytic region
NMCIJIJD_00020 6.4e-37 L transposase activity
NMCIJIJD_00021 4.7e-35
NMCIJIJD_00022 4.1e-15 L Recombinase zinc beta ribbon domain
NMCIJIJD_00024 1.5e-89 padR K Transcriptional regulator PadR-like family
NMCIJIJD_00025 6.1e-261 norB EGP Major Facilitator
NMCIJIJD_00026 4.7e-108 1.6.5.2 S NADPH-dependent FMN reductase
NMCIJIJD_00027 2.7e-94 K Bacterial regulatory proteins, tetR family
NMCIJIJD_00028 1.5e-91 entB 3.5.1.19 Q Isochorismatase family
NMCIJIJD_00029 2.2e-75 K Psort location Cytoplasmic, score
NMCIJIJD_00030 1.8e-69 yjdF S Protein of unknown function (DUF2992)
NMCIJIJD_00032 2.2e-265 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NMCIJIJD_00033 1.7e-187 yegS 2.7.1.107 G Lipid kinase
NMCIJIJD_00034 1.8e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NMCIJIJD_00035 4.1e-278 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
NMCIJIJD_00036 2.4e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NMCIJIJD_00037 3.3e-203 camS S sex pheromone
NMCIJIJD_00038 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
NMCIJIJD_00039 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
NMCIJIJD_00041 1.6e-30
NMCIJIJD_00042 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NMCIJIJD_00044 1.7e-128 L Helix-turn-helix domain
NMCIJIJD_00045 3.4e-157 L hmm pf00665
NMCIJIJD_00046 2.9e-232 yxiO S Vacuole effluxer Atg22 like
NMCIJIJD_00047 3e-267 npp S type I phosphodiesterase nucleotide pyrophosphatase
NMCIJIJD_00048 2.9e-241 E amino acid
NMCIJIJD_00049 9.4e-183 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NMCIJIJD_00052 4.7e-85 L Integrase
NMCIJIJD_00053 1.4e-86 moaC 4.6.1.17 H Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
NMCIJIJD_00054 4.6e-17 K Transcriptional regulator, LacI family
NMCIJIJD_00055 1.7e-211 fhaB M Rib/alpha-like repeat
NMCIJIJD_00056 5.6e-80 L Belongs to the 'phage' integrase family
NMCIJIJD_00058 4.6e-137
NMCIJIJD_00059 3.6e-190 M lysozyme activity
NMCIJIJD_00060 4.6e-76 S Bacteriophage holin family
NMCIJIJD_00062 0.0 E GDSL-like Lipase/Acylhydrolase
NMCIJIJD_00064 0.0 M Prophage endopeptidase tail
NMCIJIJD_00065 7.5e-154 S phage tail
NMCIJIJD_00066 3e-263 sca1 D Phage tail tape measure protein
NMCIJIJD_00067 5.4e-62
NMCIJIJD_00068 2.6e-55 S Phage tail assembly chaperone protein, TAC
NMCIJIJD_00069 8.3e-105 S Phage tail tube protein
NMCIJIJD_00070 2.1e-19 S Protein of unknown function (DUF3168)
NMCIJIJD_00071 1.4e-68 S Bacteriophage HK97-gp10, putative tail-component
NMCIJIJD_00072 1e-53
NMCIJIJD_00073 1.3e-66 S Phage gp6-like head-tail connector protein
NMCIJIJD_00074 1.4e-156
NMCIJIJD_00075 6.6e-105 S Domain of unknown function (DUF4355)
NMCIJIJD_00077 1.3e-276 S Phage Mu protein F like protein
NMCIJIJD_00078 5.4e-275 S Phage portal protein
NMCIJIJD_00079 3.2e-247 S Phage terminase, large subunit
NMCIJIJD_00080 2.4e-69 L Terminase small subunit
NMCIJIJD_00082 5.7e-117 C Domain of unknown function (DUF4145)
NMCIJIJD_00083 6.5e-81 arpU S Phage transcriptional regulator, ArpU family
NMCIJIJD_00086 8.4e-40
NMCIJIJD_00088 5.4e-77
NMCIJIJD_00089 1.5e-180
NMCIJIJD_00090 2.6e-183 fecB P Periplasmic binding protein
NMCIJIJD_00091 1.9e-141 fecE 3.6.3.34 HP AAA domain, putative AbiEii toxin, Type IV TA system
NMCIJIJD_00092 1.6e-132 fecD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NMCIJIJD_00093 3.4e-82 S Flavodoxin
NMCIJIJD_00094 2.2e-64 moaE 2.8.1.12 H MoaE protein
NMCIJIJD_00095 7.6e-36 moaD 2.8.1.12 H ThiS family
NMCIJIJD_00096 1.2e-219 narK P Transporter, major facilitator family protein
NMCIJIJD_00097 1.7e-165 hepT 2.5.1.30, 2.5.1.90 H geranyltranstransferase activity
NMCIJIJD_00098 3.6e-182
NMCIJIJD_00099 1.6e-18
NMCIJIJD_00100 3.6e-117 nreC K PFAM regulatory protein LuxR
NMCIJIJD_00101 2.5e-192 comP 2.7.13.3 F Sensor histidine kinase
NMCIJIJD_00102 3e-44
NMCIJIJD_00103 4.3e-106 mobA 2.7.7.77 H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
NMCIJIJD_00104 4.2e-86 mobB 2.10.1.1, 2.7.7.77 H molybdopterin-guanine dinucleotide biosynthesis protein
NMCIJIJD_00105 2.8e-232 moeA 2.10.1.1 H MoeA N-terminal region (domain I and II)
NMCIJIJD_00106 3.6e-85 moaB 2.7.7.75 H May be involved in the biosynthesis of molybdopterin
NMCIJIJD_00107 1.8e-192 moeB 2.7.7.73, 2.7.7.80 H ThiF family
NMCIJIJD_00108 0.0 narG 1.7.5.1 C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
NMCIJIJD_00109 0.0 narH 1.7.5.1 C 4Fe-4S dicluster domain
NMCIJIJD_00110 2.7e-100 narJ C nitrate reductase molybdenum cofactor assembly chaperone
NMCIJIJD_00111 1.5e-129 narI 1.7.5.1 C Nitrate reductase
NMCIJIJD_00112 7.7e-155 EG EamA-like transporter family
NMCIJIJD_00113 2.5e-118 L Integrase
NMCIJIJD_00114 3.8e-159 rssA S Phospholipase, patatin family
NMCIJIJD_00115 0.0 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
NMCIJIJD_00116 7.9e-244 glpT G Major Facilitator Superfamily
NMCIJIJD_00117 8.8e-15
NMCIJIJD_00119 3.1e-170 whiA K May be required for sporulation
NMCIJIJD_00120 1.7e-187 ybhK S Required for morphogenesis under gluconeogenic growth conditions
NMCIJIJD_00121 2.9e-162 rapZ S Displays ATPase and GTPase activities
NMCIJIJD_00122 8.3e-246 steT E amino acid
NMCIJIJD_00123 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
NMCIJIJD_00124 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
NMCIJIJD_00125 1.5e-13
NMCIJIJD_00126 2.3e-116 yfbR S HD containing hydrolase-like enzyme
NMCIJIJD_00127 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
NMCIJIJD_00128 1.1e-89 ykhA 3.1.2.20 I Thioesterase superfamily
NMCIJIJD_00129 8.7e-167 aatB ET PFAM extracellular solute-binding protein, family 3
NMCIJIJD_00130 5.6e-222 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
NMCIJIJD_00131 3.5e-174 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
NMCIJIJD_00132 4.7e-159 lutA C Cysteine-rich domain
NMCIJIJD_00133 1.8e-289 lutB C 4Fe-4S dicluster domain
NMCIJIJD_00134 1.6e-137 yrjD S LUD domain
NMCIJIJD_00135 1.1e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
NMCIJIJD_00136 1.8e-184 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
NMCIJIJD_00137 9.7e-160 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
NMCIJIJD_00138 4.6e-177 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
NMCIJIJD_00139 4.9e-52 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
NMCIJIJD_00140 3.1e-32 KT PspC domain protein
NMCIJIJD_00141 7e-189 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
NMCIJIJD_00142 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
NMCIJIJD_00143 3.8e-96 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
NMCIJIJD_00144 4e-127 comFC S Competence protein
NMCIJIJD_00145 2e-260 comFA L Helicase C-terminal domain protein
NMCIJIJD_00146 8.9e-113 yvyE 3.4.13.9 S YigZ family
NMCIJIJD_00147 3.1e-47 P nitrite transmembrane transporter activity
NMCIJIJD_00148 5.8e-169 yaaU EGP Major facilitator Superfamily
NMCIJIJD_00149 2.3e-50 rmaI K Transcriptional regulator
NMCIJIJD_00150 9.2e-40
NMCIJIJD_00151 0.0 ydaO E amino acid
NMCIJIJD_00152 1.1e-305 ybeC E amino acid
NMCIJIJD_00153 5.5e-86 S YbaK proline--tRNA ligase associated domain protein
NMCIJIJD_00154 1.9e-292 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
NMCIJIJD_00155 1.1e-43 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
NMCIJIJD_00157 8.2e-114 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
NMCIJIJD_00158 0.0 uup S ABC transporter, ATP-binding protein
NMCIJIJD_00159 2e-185 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
NMCIJIJD_00160 1.1e-230 mtnE 2.6.1.83 E Aminotransferase
NMCIJIJD_00161 1.4e-147 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
NMCIJIJD_00162 1.2e-138 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
NMCIJIJD_00163 3.5e-230 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
NMCIJIJD_00164 1.8e-128 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NMCIJIJD_00165 6.5e-198 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
NMCIJIJD_00166 1.5e-103 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
NMCIJIJD_00167 3.7e-131 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
NMCIJIJD_00168 1.5e-194 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
NMCIJIJD_00169 8.7e-176 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
NMCIJIJD_00170 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
NMCIJIJD_00171 2.1e-285 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
NMCIJIJD_00172 3.2e-141 fat 3.1.2.21 I Acyl-ACP thioesterase
NMCIJIJD_00173 1.9e-158 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
NMCIJIJD_00174 9.1e-59 yabA L Involved in initiation control of chromosome replication
NMCIJIJD_00175 3e-187 holB 2.7.7.7 L DNA polymerase III
NMCIJIJD_00176 7.6e-52 yaaQ S Cyclic-di-AMP receptor
NMCIJIJD_00177 5.1e-116 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
NMCIJIJD_00178 9.7e-39 S Protein of unknown function (DUF2508)
NMCIJIJD_00179 3.3e-109 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
NMCIJIJD_00180 7e-47 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
NMCIJIJD_00181 1.9e-288 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
NMCIJIJD_00182 2.7e-91 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
NMCIJIJD_00183 3.4e-35 nrdH O Glutaredoxin
NMCIJIJD_00184 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NMCIJIJD_00185 3.4e-199 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NMCIJIJD_00186 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
NMCIJIJD_00187 4.7e-137 S Putative adhesin
NMCIJIJD_00188 1.7e-84 XK27_06920 S Protein of unknown function (DUF1700)
NMCIJIJD_00189 1.1e-56 K transcriptional regulator PadR family
NMCIJIJD_00190 2e-40 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
NMCIJIJD_00192 1.5e-48
NMCIJIJD_00193 3.2e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
NMCIJIJD_00194 1.7e-82 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
NMCIJIJD_00195 7.1e-214 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
NMCIJIJD_00196 2.7e-249 M Glycosyl transferase family group 2
NMCIJIJD_00198 5.4e-228 aadAT EK Aminotransferase, class I
NMCIJIJD_00199 3.7e-162 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
NMCIJIJD_00200 6.8e-37 veg S Biofilm formation stimulator VEG
NMCIJIJD_00201 1e-162 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
NMCIJIJD_00202 5e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
NMCIJIJD_00203 1.4e-158 tatD L hydrolase, TatD family
NMCIJIJD_00204 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NMCIJIJD_00205 7.4e-163 yunF F Protein of unknown function DUF72
NMCIJIJD_00207 9.4e-132 cobB K SIR2 family
NMCIJIJD_00208 2.4e-178
NMCIJIJD_00209 1.3e-232 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
NMCIJIJD_00210 9.3e-167 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
NMCIJIJD_00211 7e-192 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
NMCIJIJD_00212 4.8e-187 hpaIM 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
NMCIJIJD_00213 2.2e-81 ndk 2.7.4.6 F Belongs to the NDK family
NMCIJIJD_00214 0.0 helD 3.6.4.12 L DNA helicase
NMCIJIJD_00215 5.3e-204 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
NMCIJIJD_00216 4.4e-216 L Belongs to the 'phage' integrase family
NMCIJIJD_00217 6.6e-08
NMCIJIJD_00221 6e-76
NMCIJIJD_00222 8.3e-129 L Helix-turn-helix domain
NMCIJIJD_00223 2.6e-123 L hmm pf00665
NMCIJIJD_00224 2.9e-232 dacA 3.4.16.4 M Belongs to the peptidase S11 family
NMCIJIJD_00225 9.7e-133 ponA V Beta-lactamase enzyme family
NMCIJIJD_00226 8e-233 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
NMCIJIJD_00227 4.1e-99 dedA 3.1.3.1 S SNARE associated Golgi protein
NMCIJIJD_00228 3.7e-182 galR K Transcriptional regulator
NMCIJIJD_00229 3e-289 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
NMCIJIJD_00230 2.2e-226 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
NMCIJIJD_00231 1.7e-187 celE 3.2.1.4 GH5,GH9 E GDSL-like Lipase/Acylhydrolase family
NMCIJIJD_00232 1.6e-148 ptp3 3.1.3.48 T Tyrosine phosphatase family
NMCIJIJD_00233 3.3e-94 yxkA S Phosphatidylethanolamine-binding protein
NMCIJIJD_00234 9.1e-36
NMCIJIJD_00235 1.8e-53
NMCIJIJD_00236 4.2e-206
NMCIJIJD_00237 1.5e-83 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
NMCIJIJD_00238 4e-136 pnuC H nicotinamide mononucleotide transporter
NMCIJIJD_00239 2.2e-94 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
NMCIJIJD_00240 2e-129 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
NMCIJIJD_00241 2.4e-153 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
NMCIJIJD_00242 1.2e-143 rpsB J Belongs to the universal ribosomal protein uS2 family
NMCIJIJD_00243 6.8e-184 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NMCIJIJD_00244 7.1e-49 yazA L GIY-YIG catalytic domain protein
NMCIJIJD_00245 8.3e-142 yabB 2.1.1.223 L Methyltransferase small domain
NMCIJIJD_00246 1.6e-117 plsC 2.3.1.51 I Acyltransferase
NMCIJIJD_00247 9.8e-30 yneF S Uncharacterised protein family (UPF0154)
NMCIJIJD_00248 3e-35 ynzC S UPF0291 protein
NMCIJIJD_00249 5.5e-115 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NMCIJIJD_00250 3.3e-85 L PFAM transposase IS200-family protein
NMCIJIJD_00251 0.0 yhcA V ABC transporter, ATP-binding protein
NMCIJIJD_00252 7.4e-121 devA 3.6.3.25 V ABC transporter, ATP-binding protein
NMCIJIJD_00253 3.5e-186 hrtB V ABC transporter permease
NMCIJIJD_00254 7.2e-89 ygfC K transcriptional regulator (TetR family)
NMCIJIJD_00255 9.9e-191 tdh 1.1.1.14 E Alcohol dehydrogenase GroES-like domain
NMCIJIJD_00256 6e-291 mntH P H( )-stimulated, divalent metal cation uptake system
NMCIJIJD_00257 7.6e-285 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
NMCIJIJD_00258 1.5e-214 uhpT EGP Major facilitator Superfamily
NMCIJIJD_00259 2.4e-261 ytjP 3.5.1.18 E Dipeptidase
NMCIJIJD_00260 3.3e-275 arcD S C4-dicarboxylate anaerobic carrier
NMCIJIJD_00261 6.7e-181 yfeX P Peroxidase
NMCIJIJD_00262 9.7e-85 lsa S ABC transporter
NMCIJIJD_00263 1.3e-179 lsa S ABC transporter
NMCIJIJD_00264 1.5e-137 I alpha/beta hydrolase fold
NMCIJIJD_00265 1.6e-180 MA20_14895 S Conserved hypothetical protein 698
NMCIJIJD_00266 3.2e-255 G Belongs to the glycosyl hydrolase family 6
NMCIJIJD_00267 5.8e-97 S NADPH-dependent FMN reductase
NMCIJIJD_00269 1.6e-171 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
NMCIJIJD_00270 8.6e-181 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
NMCIJIJD_00271 2.5e-234 mntH P H( )-stimulated, divalent metal cation uptake system
NMCIJIJD_00274 4.6e-55 K Cro/C1-type HTH DNA-binding domain
NMCIJIJD_00275 6.3e-83 Q Methyltransferase
NMCIJIJD_00276 1.4e-116 ktrA P domain protein
NMCIJIJD_00277 6.9e-240 ktrB P Potassium uptake protein
NMCIJIJD_00278 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
NMCIJIJD_00279 7.1e-141 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
NMCIJIJD_00280 1.8e-225 G Glycosyl hydrolases family 8
NMCIJIJD_00281 1.7e-243 ydaM M Glycosyl transferase
NMCIJIJD_00282 2.9e-11
NMCIJIJD_00283 3.2e-40
NMCIJIJD_00284 3.9e-125 phoU P Plays a role in the regulation of phosphate uptake
NMCIJIJD_00285 1.1e-136 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
NMCIJIJD_00286 2e-155 pstA P Phosphate transport system permease protein PstA
NMCIJIJD_00287 6.6e-154 pstC P probably responsible for the translocation of the substrate across the membrane
NMCIJIJD_00288 7.1e-161 pstS P Phosphate
NMCIJIJD_00289 3.5e-134 K Transcriptional regulatory protein, C-terminal domain protein
NMCIJIJD_00290 2.3e-136 cbiO P ABC transporter
NMCIJIJD_00291 3.8e-135 P Cobalt transport protein
NMCIJIJD_00292 2.1e-185 nikMN P PDGLE domain
NMCIJIJD_00293 6.9e-74 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NMCIJIJD_00294 7.4e-42 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NMCIJIJD_00295 5.9e-168 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
NMCIJIJD_00296 1.6e-114 ureG KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
NMCIJIJD_00297 1.9e-132 ureF O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
NMCIJIJD_00298 8.6e-78 ureE O Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
NMCIJIJD_00299 0.0 ureC 3.5.1.5 E Amidohydrolase family
NMCIJIJD_00300 2.1e-69 ureB 3.5.1.5 E Urease beta subunit
NMCIJIJD_00301 3.7e-48 ureA 3.5.1.5 E Urease, gamma subunit
NMCIJIJD_00302 7.8e-99 ureI S AmiS/UreI family transporter
NMCIJIJD_00303 8.1e-224 P ammonium transporter
NMCIJIJD_00304 1.9e-172 arcC 2.7.2.2 E Belongs to the carbamate kinase family
NMCIJIJD_00305 3.4e-191 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NMCIJIJD_00306 5.6e-155 KT YcbB domain
NMCIJIJD_00307 1.9e-302 xylB 2.7.1.17 G Belongs to the FGGY kinase family
NMCIJIJD_00308 6.2e-273 xylA 5.3.1.5 G Belongs to the xylose isomerase family
NMCIJIJD_00309 3.1e-17 pgdA 3.5.1.104 G polysaccharide deacetylase
NMCIJIJD_00310 2.2e-47 pgdA 3.5.1.104 G polysaccharide deacetylase
NMCIJIJD_00311 0.0 3.2.1.55 GH51 G Right handed beta helix region
NMCIJIJD_00312 5.1e-292 xynT G MFS/sugar transport protein
NMCIJIJD_00313 2.3e-173 rhaS2 K Transcriptional regulator, AraC family
NMCIJIJD_00314 4.3e-261 xylT EGP Major facilitator Superfamily
NMCIJIJD_00316 1.1e-217 xylR GK ROK family
NMCIJIJD_00317 1.3e-28
NMCIJIJD_00318 9e-264 pgi 5.3.1.9 G Belongs to the GPI family
NMCIJIJD_00319 3.1e-102 lacA 2.3.1.79 S Transferase hexapeptide repeat
NMCIJIJD_00320 2e-155 glcU U sugar transport
NMCIJIJD_00321 3.2e-270 yclK 2.7.13.3 T Histidine kinase
NMCIJIJD_00322 1.6e-134 K response regulator
NMCIJIJD_00324 2.8e-79 lytE M Lysin motif
NMCIJIJD_00325 2e-149 XK27_02985 S Cof-like hydrolase
NMCIJIJD_00326 2.3e-81 K Transcriptional regulator
NMCIJIJD_00327 0.0 oatA I Acyltransferase
NMCIJIJD_00328 8.7e-53
NMCIJIJD_00329 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
NMCIJIJD_00330 3.8e-254 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NMCIJIJD_00331 2.8e-128 ybbR S YbbR-like protein
NMCIJIJD_00332 5e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
NMCIJIJD_00333 4.8e-249 fucP G Major Facilitator Superfamily
NMCIJIJD_00334 1e-66 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
NMCIJIJD_00335 9.1e-167 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NMCIJIJD_00336 7.3e-169 murB 1.3.1.98 M Cell wall formation
NMCIJIJD_00337 2.7e-102 dnaQ 2.7.7.7 L DNA polymerase III
NMCIJIJD_00338 6.8e-77 S PAS domain
NMCIJIJD_00339 3e-87 K Acetyltransferase (GNAT) domain
NMCIJIJD_00340 7.7e-82 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
NMCIJIJD_00341 3.8e-179 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
NMCIJIJD_00342 8.1e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NMCIJIJD_00343 1.3e-105 yxjI
NMCIJIJD_00344 1.4e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
NMCIJIJD_00345 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
NMCIJIJD_00346 3.6e-148 est 3.1.1.1 S Serine aminopeptidase, S33
NMCIJIJD_00347 8.2e-35 secG U Preprotein translocase
NMCIJIJD_00348 9.6e-294 clcA P chloride
NMCIJIJD_00349 7.1e-248 yifK E Amino acid permease
NMCIJIJD_00350 4.2e-250 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
NMCIJIJD_00351 9.7e-143 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
NMCIJIJD_00352 2.4e-228 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
NMCIJIJD_00353 1.1e-189 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
NMCIJIJD_00355 7.8e-238 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
NMCIJIJD_00356 4.2e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
NMCIJIJD_00357 2e-201 XK27_09615 S reductase
NMCIJIJD_00358 4.9e-102 nqr 1.5.1.36 S reductase
NMCIJIJD_00360 1.1e-267 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NMCIJIJD_00361 1.1e-250 L PFAM transposase, IS4 family protein
NMCIJIJD_00362 1.1e-211 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
NMCIJIJD_00363 1.5e-74 gtcA S Teichoic acid glycosylation protein
NMCIJIJD_00364 4.7e-79 fld C Flavodoxin
NMCIJIJD_00365 1.3e-167 map 3.4.11.18 E Methionine Aminopeptidase
NMCIJIJD_00366 8.4e-223 arcT 2.6.1.1 E Aminotransferase
NMCIJIJD_00367 2.7e-258 E Arginine ornithine antiporter
NMCIJIJD_00368 1.6e-282 yjeM E Amino Acid
NMCIJIJD_00369 5.5e-153 yihY S Belongs to the UPF0761 family
NMCIJIJD_00370 2.3e-34 S Protein of unknown function (DUF2922)
NMCIJIJD_00371 4.9e-31
NMCIJIJD_00372 2.1e-143 recX 2.4.1.337 GT4 S Regulatory protein RecX
NMCIJIJD_00373 3.2e-149 cps1D M Domain of unknown function (DUF4422)
NMCIJIJD_00374 9.8e-177 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
NMCIJIJD_00375 5.7e-123 rfbP 2.7.8.6 M Bacterial sugar transferase
NMCIJIJD_00376 0.0 2.7.7.6 M Peptidase family M23
NMCIJIJD_00377 8e-34 L PFAM Integrase catalytic region
NMCIJIJD_00378 2.2e-57 yitW S Pfam:DUF59
NMCIJIJD_00379 3.5e-196 moaA 4.1.99.22 H Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
NMCIJIJD_00380 2.6e-123 flp 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
NMCIJIJD_00381 3.1e-77 L PFAM Integrase catalytic region
NMCIJIJD_00382 3.1e-77 L PFAM Integrase catalytic region
NMCIJIJD_00384 0.0
NMCIJIJD_00385 5.4e-27
NMCIJIJD_00386 6.1e-137 agrA K LytTr DNA-binding domain
NMCIJIJD_00387 3.1e-77 L PFAM Integrase catalytic region
NMCIJIJD_00388 4.5e-258 nhaC C Na H antiporter NhaC
NMCIJIJD_00389 1.2e-38 S Cytochrome b5-like Heme/Steroid binding domain
NMCIJIJD_00390 4.4e-115 ywnB S NAD(P)H-binding
NMCIJIJD_00391 4.4e-38
NMCIJIJD_00392 2e-132 IQ Dehydrogenase reductase
NMCIJIJD_00393 7.3e-242 yhjE EGP MFS transporter, metabolite H symporter (MHS) family protein
NMCIJIJD_00395 2.6e-266 3.4.24.40 M Peptidase family M23
NMCIJIJD_00397 0.0 cotH M CotH kinase protein
NMCIJIJD_00398 1.2e-108 gepA S Protein of unknown function (DUF4065)
NMCIJIJD_00400 3.1e-77 L PFAM Integrase catalytic region
NMCIJIJD_00401 4.1e-43 yrzL S Belongs to the UPF0297 family
NMCIJIJD_00402 3.6e-76 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
NMCIJIJD_00403 6.1e-48 yrzB S Belongs to the UPF0473 family
NMCIJIJD_00404 1.6e-86 cvpA S Colicin V production protein
NMCIJIJD_00405 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
NMCIJIJD_00406 6.1e-54 trxA O Belongs to the thioredoxin family
NMCIJIJD_00407 1.6e-97 yslB S Protein of unknown function (DUF2507)
NMCIJIJD_00408 4.1e-147 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
NMCIJIJD_00409 1.4e-107 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
NMCIJIJD_00410 5.7e-97 S Phosphoesterase
NMCIJIJD_00411 3.6e-76 ykuL S (CBS) domain
NMCIJIJD_00412 4.3e-155 3.1.3.102, 3.1.3.104, 3.1.3.23 S haloacid dehalogenase-like hydrolase
NMCIJIJD_00413 1.1e-148 ykuT M mechanosensitive ion channel
NMCIJIJD_00414 6.5e-38 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
NMCIJIJD_00415 1.5e-29
NMCIJIJD_00416 9.1e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
NMCIJIJD_00417 4.5e-183 ccpA K catabolite control protein A
NMCIJIJD_00418 2e-136
NMCIJIJD_00419 1.6e-132 yebC K Transcriptional regulatory protein
NMCIJIJD_00420 4.6e-185 comGA NU Type II IV secretion system protein
NMCIJIJD_00421 5.6e-189 comGB NU type II secretion system
NMCIJIJD_00422 5.4e-47 comGC U competence protein ComGC
NMCIJIJD_00423 8.9e-80 NU general secretion pathway protein
NMCIJIJD_00424 6.9e-44
NMCIJIJD_00425 1.8e-72
NMCIJIJD_00427 4.5e-146 ytxK 2.1.1.72 L N-6 DNA Methylase
NMCIJIJD_00428 1.1e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NMCIJIJD_00429 2e-117 S Calcineurin-like phosphoesterase
NMCIJIJD_00430 4.4e-100 yutD S Protein of unknown function (DUF1027)
NMCIJIJD_00431 1.6e-140 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
NMCIJIJD_00432 1.1e-113 S Protein of unknown function (DUF1461)
NMCIJIJD_00433 4.2e-110 dedA S SNARE-like domain protein
NMCIJIJD_00434 2.3e-24
NMCIJIJD_00436 1.6e-58
NMCIJIJD_00437 2.5e-158 dnaQ 2.7.7.7 L 3'-5' exonuclease
NMCIJIJD_00438 4.5e-87 E IrrE N-terminal-like domain
NMCIJIJD_00439 6.7e-72 K Cro/C1-type HTH DNA-binding domain
NMCIJIJD_00440 8.2e-34 K Helix-turn-helix XRE-family like proteins
NMCIJIJD_00441 2.3e-149 S Protein of unknown function (DUF3102)
NMCIJIJD_00443 9.2e-08
NMCIJIJD_00446 2.2e-07
NMCIJIJD_00448 2e-59 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
NMCIJIJD_00449 1.1e-132 S Putative HNHc nuclease
NMCIJIJD_00450 1.7e-141 L Psort location Cytoplasmic, score
NMCIJIJD_00457 4.7e-44
NMCIJIJD_00458 2.7e-79 rusA L Endodeoxyribonuclease RusA
NMCIJIJD_00467 4.8e-145
NMCIJIJD_00473 5e-164
NMCIJIJD_00474 1.8e-130 dck 2.7.1.74 F deoxynucleoside kinase
NMCIJIJD_00479 1.9e-74 S Transcriptional regulator, RinA family
NMCIJIJD_00481 0.0
NMCIJIJD_00482 3e-93 S LemA family
NMCIJIJD_00483 2.8e-137
NMCIJIJD_00494 2e-140 pnuC H nicotinamide mononucleotide transporter
NMCIJIJD_00496 2.3e-27 N mRNA binding
NMCIJIJD_00497 3.3e-68 S HicB_like antitoxin of bacterial toxin-antitoxin system
NMCIJIJD_00498 3.3e-180 T Histidine kinase-like ATPases
NMCIJIJD_00500 2.8e-13
NMCIJIJD_00514 1.6e-57 L HNH nucleases
NMCIJIJD_00515 4.2e-80 L Phage terminase, small subunit
NMCIJIJD_00516 2.7e-93 L Terminase
NMCIJIJD_00517 1.1e-13 S endonuclease activity
NMCIJIJD_00518 1.7e-267 L Terminase
NMCIJIJD_00519 4.3e-247 S portal protein
NMCIJIJD_00520 7.5e-138 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
NMCIJIJD_00521 2.8e-213 S Phage capsid family
NMCIJIJD_00523 2.1e-60 S Phage gp6-like head-tail connector protein
NMCIJIJD_00524 1.2e-63 S Phage head-tail joining protein
NMCIJIJD_00525 1.9e-83
NMCIJIJD_00526 8.7e-71
NMCIJIJD_00527 3.9e-133 S Phage tail tube protein
NMCIJIJD_00528 3.7e-67
NMCIJIJD_00529 0.0 M Phage tail tape measure protein TP901
NMCIJIJD_00530 1.5e-144 S Phage tail protein
NMCIJIJD_00531 3.5e-303 M Prophage endopeptidase tail
NMCIJIJD_00532 5.5e-39
NMCIJIJD_00534 0.0 S Domain of unknown function (DUF2479)
NMCIJIJD_00538 1.2e-68 S Bacteriophage holin of superfamily 6 (Holin_LLH)
NMCIJIJD_00539 1.4e-209 3.5.1.104 M hydrolase, family 25
NMCIJIJD_00541 1.5e-103 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
NMCIJIJD_00542 3.6e-196 ypbB 5.1.3.1 S Helix-turn-helix domain
NMCIJIJD_00543 1.6e-274 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
NMCIJIJD_00544 8.8e-27 M Lysin motif
NMCIJIJD_00545 9e-119 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
NMCIJIJD_00546 1.4e-205 rpsA 1.17.7.4 J Ribosomal protein S1
NMCIJIJD_00547 7.2e-250 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
NMCIJIJD_00548 2.6e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
NMCIJIJD_00549 8.8e-237 S Tetratricopeptide repeat protein
NMCIJIJD_00550 1.8e-226 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
NMCIJIJD_00551 0.0 yfmR S ABC transporter, ATP-binding protein
NMCIJIJD_00552 7.7e-193 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
NMCIJIJD_00553 5.1e-92 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
NMCIJIJD_00554 5.3e-113 hlyIII S protein, hemolysin III
NMCIJIJD_00555 3.4e-152 DegV S EDD domain protein, DegV family
NMCIJIJD_00556 1.9e-172 ypmR E lipolytic protein G-D-S-L family
NMCIJIJD_00557 7.4e-109 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
NMCIJIJD_00558 1.5e-35 yozE S Belongs to the UPF0346 family
NMCIJIJD_00559 2.2e-162 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
NMCIJIJD_00560 4.5e-143 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NMCIJIJD_00561 6.2e-165 dprA LU DNA protecting protein DprA
NMCIJIJD_00562 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NMCIJIJD_00563 7.4e-166 lacX 5.1.3.3 G Aldose 1-epimerase
NMCIJIJD_00564 1.5e-107 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
NMCIJIJD_00565 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
NMCIJIJD_00566 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
NMCIJIJD_00567 1.8e-83 F Hydrolase, NUDIX family
NMCIJIJD_00568 2.3e-173 ppaC 3.6.1.1 C inorganic pyrophosphatase
NMCIJIJD_00570 8.4e-90 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
NMCIJIJD_00571 1.6e-66 K HxlR-like helix-turn-helix
NMCIJIJD_00572 1.3e-63 S macrophage migration inhibitory factor
NMCIJIJD_00573 1e-89 yqiG C Oxidoreductase
NMCIJIJD_00574 6.7e-56 yqiG C Oxidoreductase
NMCIJIJD_00576 2.8e-19
NMCIJIJD_00577 1e-263 dtpT U amino acid peptide transporter
NMCIJIJD_00578 5.7e-160 yjjH S Calcineurin-like phosphoesterase
NMCIJIJD_00581 2.1e-117
NMCIJIJD_00582 3.3e-85 L PFAM transposase IS200-family protein
NMCIJIJD_00583 5.5e-42 manA 5.3.1.8 G mannose-6-phosphate isomerase
NMCIJIJD_00585 4.6e-183
NMCIJIJD_00586 6.4e-99 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
NMCIJIJD_00587 3.1e-185 S Phosphotransferase system, EIIC
NMCIJIJD_00588 0.0 UW LPXTG-motif cell wall anchor domain protein
NMCIJIJD_00589 0.0 UW LPXTG-motif cell wall anchor domain protein
NMCIJIJD_00590 0.0 UW LPXTG-motif cell wall anchor domain protein
NMCIJIJD_00591 3.3e-85 L PFAM transposase IS200-family protein
NMCIJIJD_00592 2.7e-257 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
NMCIJIJD_00593 3.8e-198 asnA 6.3.1.1 F aspartate--ammonia ligase
NMCIJIJD_00594 5.3e-93 folT S ECF transporter, substrate-specific component
NMCIJIJD_00595 0.0 pepN 3.4.11.2 E aminopeptidase
NMCIJIJD_00596 6.2e-114 ylbE GM NAD dependent epimerase dehydratase family protein
NMCIJIJD_00597 2.7e-257 pepC 3.4.22.40 E aminopeptidase
NMCIJIJD_00598 2.6e-211 EGP Major facilitator Superfamily
NMCIJIJD_00599 3.8e-243
NMCIJIJD_00600 2.4e-83 K Transcriptional regulator, HxlR family
NMCIJIJD_00601 1.1e-109 XK27_02070 S Nitroreductase family
NMCIJIJD_00602 1.9e-52 hxlR K Transcriptional regulator, HxlR family
NMCIJIJD_00603 1.1e-121 GM NmrA-like family
NMCIJIJD_00604 6.4e-78 elaA S Gnat family
NMCIJIJD_00605 1.8e-39 S Cytochrome B5
NMCIJIJD_00606 5.4e-09 S Cytochrome B5
NMCIJIJD_00607 1.2e-41 S Cytochrome B5
NMCIJIJD_00608 3.2e-222 yxjG_1 E methionine synthase, vitamin-B12 independent
NMCIJIJD_00609 7.6e-228 V domain protein
NMCIJIJD_00610 1.6e-94 K Transcriptional regulator (TetR family)
NMCIJIJD_00611 4.4e-39 pspC KT PspC domain protein
NMCIJIJD_00612 3.4e-35
NMCIJIJD_00613 4.4e-55 S Mazg nucleotide pyrophosphohydrolase
NMCIJIJD_00614 8.8e-161 xth 3.1.11.2 L exodeoxyribonuclease III
NMCIJIJD_00615 6.6e-84
NMCIJIJD_00616 3.8e-190 lacR K Transcriptional regulator
NMCIJIJD_00617 0.0 lacS G Transporter
NMCIJIJD_00618 6.8e-109 lacZ 3.2.1.23 G -beta-galactosidase
NMCIJIJD_00619 2.5e-288 lacZ 3.2.1.23 G -beta-galactosidase
NMCIJIJD_00620 1.5e-172 D nuclear chromosome segregation
NMCIJIJD_00621 9e-181 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
NMCIJIJD_00622 6.8e-159 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
NMCIJIJD_00623 4.7e-131 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
NMCIJIJD_00624 8.2e-224 mdtG EGP Major facilitator Superfamily
NMCIJIJD_00625 9e-169 T Calcineurin-like phosphoesterase superfamily domain
NMCIJIJD_00626 9.2e-43 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NMCIJIJD_00628 2e-123 sdaAB 4.3.1.17 E Serine dehydratase beta chain
NMCIJIJD_00629 3e-143 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
NMCIJIJD_00630 3.2e-106 ahpC 1.11.1.15 O Peroxiredoxin
NMCIJIJD_00631 0.0 trxB2 1.8.1.9 C Thioredoxin domain
NMCIJIJD_00632 0.0 M LPXTG-motif cell wall anchor domain protein
NMCIJIJD_00633 4.6e-196 nss M transferase activity, transferring glycosyl groups
NMCIJIJD_00634 1.5e-209 secY2 U Part of the accessory SecA2 SecY2 system specifically required for export of
NMCIJIJD_00635 1.3e-298 M transferase activity, transferring glycosyl groups
NMCIJIJD_00636 3.2e-294 asp2 3.4.11.5 S Accessory Sec system GspB-transporter
NMCIJIJD_00637 3.6e-168 asp3 S Accessory Sec secretory system ASP3
NMCIJIJD_00638 0.0 secA2 U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
NMCIJIJD_00639 5.2e-300 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
NMCIJIJD_00640 3.4e-263 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
NMCIJIJD_00642 0.0 GT2,GT4 M Pfam:DUF1792
NMCIJIJD_00643 0.0 M family 8
NMCIJIJD_00644 1.3e-273 M family 8
NMCIJIJD_00645 0.0 lmrA V ABC transporter, ATP-binding protein
NMCIJIJD_00646 0.0 yfiC V ABC transporter
NMCIJIJD_00647 5.8e-285 pipD E Dipeptidase
NMCIJIJD_00648 7.8e-85 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NMCIJIJD_00649 1.1e-250 L PFAM transposase, IS4 family protein
NMCIJIJD_00650 7.8e-238 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
NMCIJIJD_00651 2.9e-47 ybaN S Protein of unknown function (DUF454)
NMCIJIJD_00652 1.8e-72 S Protein of unknown function (DUF3290)
NMCIJIJD_00653 4.3e-115 yviA S Protein of unknown function (DUF421)
NMCIJIJD_00654 5e-167 S Alpha/beta hydrolase of unknown function (DUF915)
NMCIJIJD_00655 3.4e-21
NMCIJIJD_00656 1.2e-90 ntd 2.4.2.6 F Nucleoside
NMCIJIJD_00657 1.9e-155 3.1.3.102, 3.1.3.104 S hydrolase
NMCIJIJD_00658 3e-49 yrvD S Pfam:DUF1049
NMCIJIJD_00660 2e-205 L Belongs to the 'phage' integrase family
NMCIJIJD_00661 2.3e-72
NMCIJIJD_00662 2.6e-32
NMCIJIJD_00664 8.1e-76
NMCIJIJD_00667 7.6e-123 3.4.21.88 K Peptidase S24-like
NMCIJIJD_00668 1.1e-09 K Helix-turn-helix XRE-family like proteins
NMCIJIJD_00672 7.8e-54
NMCIJIJD_00673 7.3e-61
NMCIJIJD_00674 8e-15
NMCIJIJD_00677 2.3e-122 L DnaD domain protein
NMCIJIJD_00678 1.3e-190 L Belongs to the 'phage' integrase family
NMCIJIJD_00679 3.3e-126 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
NMCIJIJD_00681 4.8e-70
NMCIJIJD_00682 1.7e-134
NMCIJIJD_00689 1.4e-83 arpU S Phage transcriptional regulator, ArpU family
NMCIJIJD_00690 2.2e-93 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
NMCIJIJD_00691 6.5e-179 bcgIA 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
NMCIJIJD_00692 6.2e-156 L HNH nucleases
NMCIJIJD_00693 1.4e-78 terS L Phage terminase, small subunit
NMCIJIJD_00694 0.0 terL S overlaps another CDS with the same product name
NMCIJIJD_00696 2e-241 S Phage portal protein
NMCIJIJD_00697 6.8e-116 pi136 S Caudovirus prohead serine protease
NMCIJIJD_00698 7e-209 S Phage capsid family
NMCIJIJD_00699 6.1e-70 S Phage gp6-like head-tail connector protein
NMCIJIJD_00700 6e-41 S Phage head-tail joining protein
NMCIJIJD_00701 8.5e-63 S Bacteriophage HK97-gp10, putative tail-component
NMCIJIJD_00702 4e-77
NMCIJIJD_00703 7.7e-117
NMCIJIJD_00704 4.6e-58
NMCIJIJD_00705 4.6e-24
NMCIJIJD_00706 0.0 M Phage tail tape measure protein TP901
NMCIJIJD_00707 1.7e-159 S Phage tail protein
NMCIJIJD_00708 4.5e-232
NMCIJIJD_00709 7.8e-238 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
NMCIJIJD_00710 6e-224 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
NMCIJIJD_00711 1.3e-84 F Belongs to the NrdI family
NMCIJIJD_00712 3.3e-85 L PFAM transposase IS200-family protein
NMCIJIJD_00713 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
NMCIJIJD_00714 3.4e-77 ctsR K Belongs to the CtsR family
NMCIJIJD_00715 9.4e-197 adhP 1.1.1.1 C alcohol dehydrogenase
NMCIJIJD_00716 2.3e-181 S Hydrolases of the alpha beta superfamily
NMCIJIJD_00722 9.6e-115 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
NMCIJIJD_00723 1e-276 lysP E amino acid
NMCIJIJD_00724 3.5e-10 2.3.1.128 J Acetyltransferase (GNAT) domain
NMCIJIJD_00725 2.1e-120 lssY 3.6.1.27 I phosphatase
NMCIJIJD_00726 4.2e-83 S Threonine/Serine exporter, ThrE
NMCIJIJD_00727 1.2e-132 thrE S Putative threonine/serine exporter
NMCIJIJD_00728 3.5e-31 cspC K Cold shock protein
NMCIJIJD_00729 4.8e-125 sirR K iron dependent repressor
NMCIJIJD_00730 9.1e-167 czcD P cation diffusion facilitator family transporter
NMCIJIJD_00731 1.7e-117 S membrane
NMCIJIJD_00732 7.6e-110 S VIT family
NMCIJIJD_00733 4.2e-83 usp1 T Belongs to the universal stress protein A family
NMCIJIJD_00734 1.4e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
NMCIJIJD_00735 6.7e-153 glnH ET ABC transporter
NMCIJIJD_00736 3.2e-110 gluC P ABC transporter permease
NMCIJIJD_00737 3.6e-109 glnP P ABC transporter permease
NMCIJIJD_00738 1.1e-220 S CAAX protease self-immunity
NMCIJIJD_00739 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NMCIJIJD_00740 1.4e-56
NMCIJIJD_00741 5.2e-75 merR K MerR HTH family regulatory protein
NMCIJIJD_00742 7.2e-270 lmrB EGP Major facilitator Superfamily
NMCIJIJD_00743 2e-124 S Domain of unknown function (DUF4811)
NMCIJIJD_00744 3.3e-166 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
NMCIJIJD_00746 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
NMCIJIJD_00747 2.6e-94 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
NMCIJIJD_00748 4.1e-189 I Alpha beta
NMCIJIJD_00749 1.3e-285 emrY EGP Major facilitator Superfamily
NMCIJIJD_00750 4.5e-120 ung2 3.2.2.27 L Uracil-DNA glycosylase
NMCIJIJD_00751 5.5e-253 yjjP S Putative threonine/serine exporter
NMCIJIJD_00752 1e-159 mleR K LysR family
NMCIJIJD_00753 6.8e-254 yflS P Sodium:sulfate symporter transmembrane region
NMCIJIJD_00754 1.3e-268 frdC 1.3.5.4 C FAD binding domain
NMCIJIJD_00755 2.1e-260 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
NMCIJIJD_00756 9.9e-310 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
NMCIJIJD_00757 1.1e-164 mleR K LysR family
NMCIJIJD_00758 1e-110 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NMCIJIJD_00759 1.6e-207 adhA 1.1.1.1 C Zinc-binding alcohol dehydrogenase family protein
NMCIJIJD_00760 9.8e-299 L PFAM plasmid pRiA4b ORF-3 family protein
NMCIJIJD_00761 3.4e-266 S Uncharacterized protein conserved in bacteria (DUF2252)
NMCIJIJD_00762 1.1e-29
NMCIJIJD_00763 1e-203 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
NMCIJIJD_00764 4.2e-200 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
NMCIJIJD_00765 1.1e-115 S Membrane
NMCIJIJD_00766 8.5e-117 O Zinc-dependent metalloprotease
NMCIJIJD_00767 2.6e-88 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
NMCIJIJD_00768 4.5e-160 metQ_4 P Belongs to the nlpA lipoprotein family
NMCIJIJD_00770 3.3e-258 NU Mycoplasma protein of unknown function, DUF285
NMCIJIJD_00771 2.2e-224 XK27_08635 S UPF0210 protein
NMCIJIJD_00772 2.1e-39 gcvR T Belongs to the UPF0237 family
NMCIJIJD_00773 3.7e-173 1.1.1.346 C Aldo keto reductase
NMCIJIJD_00774 2.6e-67 K Transcriptional regulator
NMCIJIJD_00775 1e-80 yphH S Cupin domain
NMCIJIJD_00776 4.5e-74 yeaL S UPF0756 membrane protein
NMCIJIJD_00777 8.7e-246 EGP Major facilitator Superfamily
NMCIJIJD_00778 5e-75 copY K Copper transport repressor CopY TcrY
NMCIJIJD_00779 1.9e-245 yhdP S Transporter associated domain
NMCIJIJD_00780 0.0 ubiB S ABC1 family
NMCIJIJD_00781 3.4e-149 S DUF218 domain
NMCIJIJD_00782 9.5e-118 nreC K PFAM regulatory protein LuxR
NMCIJIJD_00783 9.2e-39 S Cytochrome B5
NMCIJIJD_00784 6.4e-156 yitU 3.1.3.104 S hydrolase
NMCIJIJD_00785 6.5e-270 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
NMCIJIJD_00786 1.8e-148 f42a O Band 7 protein
NMCIJIJD_00787 0.0 lytS 2.7.13.3 T LytS YhcK-type transmembrane receptor domain protein
NMCIJIJD_00788 1.1e-130 lytT K response regulator receiver
NMCIJIJD_00789 1.9e-66 lrgA S LrgA family
NMCIJIJD_00790 2.6e-124 lrgB M LrgB-like family
NMCIJIJD_00791 5.8e-180 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
NMCIJIJD_00792 6.2e-173 scrK 2.7.1.2, 2.7.1.4 GK ROK family
NMCIJIJD_00793 5.6e-132 galR K Periplasmic binding protein-like domain
NMCIJIJD_00794 3.8e-70 yqeY S YqeY-like protein
NMCIJIJD_00795 1.2e-23 rpsU J Belongs to the bacterial ribosomal protein bS21 family
NMCIJIJD_00796 6.3e-266 glnPH2 P ABC transporter permease
NMCIJIJD_00797 1.8e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
NMCIJIJD_00798 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
NMCIJIJD_00799 9.6e-171 yniA G Phosphotransferase enzyme family
NMCIJIJD_00800 1.4e-256 L Transposase
NMCIJIJD_00801 4.7e-265 dapE 3.5.1.18 E Peptidase dimerisation domain
NMCIJIJD_00802 2.5e-233 Q Imidazolonepropionase and related amidohydrolases
NMCIJIJD_00803 0.0 dap2 3.4.19.1 E Prolyl oligopeptidase family
NMCIJIJD_00804 1.8e-220 Q Imidazolonepropionase and related amidohydrolases
NMCIJIJD_00805 8.2e-165 P Belongs to the ABC transporter superfamily
NMCIJIJD_00806 3e-198 oppD P Belongs to the ABC transporter superfamily
NMCIJIJD_00807 1.7e-165 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
NMCIJIJD_00808 2.7e-158 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
NMCIJIJD_00809 4.5e-310 E ABC transporter, substratebinding protein
NMCIJIJD_00810 8.4e-78 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
NMCIJIJD_00811 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NMCIJIJD_00812 1.2e-52
NMCIJIJD_00813 2.9e-131 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
NMCIJIJD_00814 1.4e-181 prmA J Ribosomal protein L11 methyltransferase
NMCIJIJD_00815 7.5e-58
NMCIJIJD_00816 8e-174 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
NMCIJIJD_00817 1.7e-201 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
NMCIJIJD_00818 4.7e-279 pipD E Dipeptidase
NMCIJIJD_00819 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
NMCIJIJD_00820 5.1e-199 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
NMCIJIJD_00821 0.0 dnaK O Heat shock 70 kDa protein
NMCIJIJD_00822 2.7e-76 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
NMCIJIJD_00823 1.8e-195 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
NMCIJIJD_00824 2.6e-64
NMCIJIJD_00825 3.3e-180 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
NMCIJIJD_00826 2.1e-168 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
NMCIJIJD_00827 2.1e-58 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
NMCIJIJD_00828 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
NMCIJIJD_00829 4.5e-49 ylxQ J ribosomal protein
NMCIJIJD_00830 1e-44 ylxR K Protein of unknown function (DUF448)
NMCIJIJD_00831 2.1e-216 nusA K Participates in both transcription termination and antitermination
NMCIJIJD_00832 1.9e-83 rimP J Required for maturation of 30S ribosomal subunits
NMCIJIJD_00833 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
NMCIJIJD_00834 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
NMCIJIJD_00835 5.7e-236 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
NMCIJIJD_00836 3.4e-138 cdsA 2.7.7.41 I Belongs to the CDS family
NMCIJIJD_00837 1.7e-142 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NMCIJIJD_00838 8.3e-69 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
NMCIJIJD_00839 4e-60 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NMCIJIJD_00840 9.1e-56 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NMCIJIJD_00841 0.0 uvrA3 L excinuclease ABC, A subunit
NMCIJIJD_00842 4.6e-123 S SNARE associated Golgi protein
NMCIJIJD_00843 1.9e-161 N Uncharacterized conserved protein (DUF2075)
NMCIJIJD_00844 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
NMCIJIJD_00846 2.1e-255 yifK E Amino acid permease
NMCIJIJD_00847 6.7e-148 endA V DNA/RNA non-specific endonuclease
NMCIJIJD_00848 0.0 I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NMCIJIJD_00849 7.8e-238 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
NMCIJIJD_00850 0.0 S Bacterial membrane protein, YfhO
NMCIJIJD_00851 1.2e-134 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NMCIJIJD_00852 1.1e-169 I alpha/beta hydrolase fold
NMCIJIJD_00853 7.7e-216 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
NMCIJIJD_00854 4.9e-120 tcyB E ABC transporter
NMCIJIJD_00855 3.4e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
NMCIJIJD_00856 1.1e-141 tcyA ET Belongs to the bacterial solute-binding protein 3 family
NMCIJIJD_00857 4.1e-269 pepC 3.4.22.40 E Peptidase C1-like family
NMCIJIJD_00858 2.6e-126 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
NMCIJIJD_00859 3.8e-50 HA62_12640 S GCN5-related N-acetyl-transferase
NMCIJIJD_00860 1.5e-100 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
NMCIJIJD_00861 2.4e-256 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
NMCIJIJD_00862 5.4e-209 yacL S domain protein
NMCIJIJD_00863 9.1e-275 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
NMCIJIJD_00864 1.9e-71 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
NMCIJIJD_00865 2.7e-137 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NMCIJIJD_00866 1.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
NMCIJIJD_00867 1.4e-15 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
NMCIJIJD_00868 3.4e-97 nusG K Participates in transcription elongation, termination and antitermination
NMCIJIJD_00869 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
NMCIJIJD_00870 3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
NMCIJIJD_00871 7.8e-238 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
NMCIJIJD_00874 4.9e-08
NMCIJIJD_00875 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
NMCIJIJD_00876 9.4e-250 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
NMCIJIJD_00877 1.3e-176 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
NMCIJIJD_00878 7.7e-157 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
NMCIJIJD_00879 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
NMCIJIJD_00880 7.1e-92 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
NMCIJIJD_00881 3.5e-90
NMCIJIJD_00883 3.8e-130 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NMCIJIJD_00884 6.6e-215 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
NMCIJIJD_00885 3.3e-85 L PFAM transposase IS200-family protein
NMCIJIJD_00886 1.1e-250 L PFAM transposase, IS4 family protein
NMCIJIJD_00887 3.5e-38 S YSIRK type signal peptide
NMCIJIJD_00888 8.1e-122 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
NMCIJIJD_00889 4e-207 ecsB U ABC transporter
NMCIJIJD_00890 2.7e-137 ecsA V ABC transporter, ATP-binding protein
NMCIJIJD_00891 8.3e-78 hit FG histidine triad
NMCIJIJD_00893 5.3e-130 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
NMCIJIJD_00894 0.0 L AAA domain
NMCIJIJD_00895 7.5e-230 yhaO L Ser Thr phosphatase family protein
NMCIJIJD_00896 9.4e-38 yheA S Belongs to the UPF0342 family
NMCIJIJD_00897 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
NMCIJIJD_00898 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
NMCIJIJD_00899 7.3e-152 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
NMCIJIJD_00900 3.8e-168 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
NMCIJIJD_00902 3.3e-40
NMCIJIJD_00903 1e-43
NMCIJIJD_00904 1.7e-218 folP 2.5.1.15 H dihydropteroate synthase
NMCIJIJD_00905 2e-106 xtp 2.5.1.15, 3.6.1.66 F Ham1 family
NMCIJIJD_00906 1e-237 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
NMCIJIJD_00907 6.2e-105 folE 2.7.6.3, 3.5.4.16 F GTP cyclohydrolase 1
NMCIJIJD_00908 3.4e-94 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
NMCIJIJD_00909 1.1e-56 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
NMCIJIJD_00910 1.5e-73
NMCIJIJD_00911 1.1e-144 S Domain of unknown function DUF1829
NMCIJIJD_00912 1.8e-59
NMCIJIJD_00914 1.9e-43
NMCIJIJD_00915 1.4e-113 S CAAX protease self-immunity
NMCIJIJD_00916 2.1e-32
NMCIJIJD_00917 3.6e-163 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NMCIJIJD_00918 6.1e-188 rbsR K Periplasmic binding proteins and sugar binding domain of LacI family
NMCIJIJD_00919 9.1e-115
NMCIJIJD_00920 5e-116 dck 2.7.1.74 F deoxynucleoside kinase
NMCIJIJD_00921 1e-187 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
NMCIJIJD_00922 4.3e-86 uspA T Belongs to the universal stress protein A family
NMCIJIJD_00923 5.1e-278 pepV 3.5.1.18 E dipeptidase PepV
NMCIJIJD_00924 2.6e-155 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
NMCIJIJD_00925 1.4e-303 ytgP S Polysaccharide biosynthesis protein
NMCIJIJD_00926 7.6e-42
NMCIJIJD_00927 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
NMCIJIJD_00928 1.9e-217 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
NMCIJIJD_00929 2e-55 tag 3.2.2.20 L glycosylase
NMCIJIJD_00930 3.2e-24 tag 3.2.2.20 L DNA-3-methyladenine glycosylase activity
NMCIJIJD_00931 2.4e-259 EGP Major facilitator Superfamily
NMCIJIJD_00932 4.3e-85 perR P Belongs to the Fur family
NMCIJIJD_00933 5.7e-234 cycA E Amino acid permease
NMCIJIJD_00934 1.7e-102 V VanZ like family
NMCIJIJD_00935 1e-23
NMCIJIJD_00936 7.7e-86 S Short repeat of unknown function (DUF308)
NMCIJIJD_00937 9.1e-80 S Psort location Cytoplasmic, score
NMCIJIJD_00938 1.7e-287 dinB 2.7.7.7 L impB/mucB/samB family C-terminal domain
NMCIJIJD_00939 2.4e-77 hsp O Belongs to the small heat shock protein (HSP20) family
NMCIJIJD_00940 5.1e-156 yeaE S Aldo keto
NMCIJIJD_00941 5.3e-237 preA 1.3.1.1 C 4Fe-4S dicluster domain
NMCIJIJD_00942 9.5e-236 preT 1.3.1.1 E Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
NMCIJIJD_00943 4.4e-151 xth 3.1.11.2 L exodeoxyribonuclease III
NMCIJIJD_00944 2.3e-93 lytE M LysM domain protein
NMCIJIJD_00945 0.0 oppD EP Psort location Cytoplasmic, score
NMCIJIJD_00946 2.3e-81 lytE M LysM domain protein
NMCIJIJD_00947 2.6e-166 sufD O Uncharacterized protein family (UPF0051)
NMCIJIJD_00948 9e-112 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NMCIJIJD_00949 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
NMCIJIJD_00950 3.8e-241 lmrB EGP Major facilitator Superfamily
NMCIJIJD_00951 1.1e-250 L PFAM transposase, IS4 family protein
NMCIJIJD_00952 1.5e-62 gspA M lipopolysaccharide 3-alpha-galactosyltransferase activity
NMCIJIJD_00953 6e-120 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
NMCIJIJD_00954 9.4e-94
NMCIJIJD_00955 9.9e-163 degV S EDD domain protein, DegV family
NMCIJIJD_00956 0.0 FbpA K Fibronectin-binding protein
NMCIJIJD_00957 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
NMCIJIJD_00958 3.9e-209 carA 6.3.5.5 F Belongs to the CarA family
NMCIJIJD_00959 2.8e-176 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
NMCIJIJD_00960 9.8e-74 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
NMCIJIJD_00961 1.5e-65 esbA S Family of unknown function (DUF5322)
NMCIJIJD_00962 1.8e-71 rnhA 3.1.26.4 L Ribonuclease HI
NMCIJIJD_00963 1.1e-250 L PFAM transposase, IS4 family protein
NMCIJIJD_00968 8.2e-243 repB EP Plasmid replication protein
NMCIJIJD_00969 9.4e-236 L Belongs to the 'phage' integrase family
NMCIJIJD_00975 1.4e-13 K Cro/C1-type HTH DNA-binding domain
NMCIJIJD_00976 1.3e-133
NMCIJIJD_00979 9.2e-46
NMCIJIJD_00980 1.1e-250 L PFAM transposase, IS4 family protein
NMCIJIJD_00981 3.7e-122 gspA M family 8
NMCIJIJD_00982 8.1e-162 S Alpha beta hydrolase
NMCIJIJD_00983 1.1e-95 K Acetyltransferase (GNAT) domain
NMCIJIJD_00984 1.1e-250 L PFAM transposase, IS4 family protein
NMCIJIJD_00985 3.8e-23 2.1.1.72, 3.1.21.3 AA10,CBM73 L Belongs to the N(4) N(6)-methyltransferase family
NMCIJIJD_00986 1.1e-250 L PFAM transposase, IS4 family protein
NMCIJIJD_00987 1.5e-156 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
NMCIJIJD_00988 7.3e-69 S Protein of unknown function (DUF3021)
NMCIJIJD_00989 6.4e-78 K LytTr DNA-binding domain
NMCIJIJD_00990 3.7e-22
NMCIJIJD_00991 2.9e-210 yhjX P Major Facilitator Superfamily
NMCIJIJD_00992 4.4e-121 ybhL S Belongs to the BI1 family
NMCIJIJD_00993 1.5e-82 yjcF 3.5.4.33, 4.4.1.8 K protein acetylation
NMCIJIJD_00994 1.8e-200 S Protein of unknown function (DUF3114)
NMCIJIJD_00995 4.4e-299 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
NMCIJIJD_00996 3.5e-166 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
NMCIJIJD_00997 4.5e-111 yvdD 3.2.2.10 S Belongs to the LOG family
NMCIJIJD_00998 5.3e-62 S Domain of unknown function (DUF4828)
NMCIJIJD_00999 1.5e-191 mocA S Oxidoreductase
NMCIJIJD_01000 6.1e-233 yfmL L DEAD DEAH box helicase
NMCIJIJD_01002 1.4e-32 yajC U Preprotein translocase
NMCIJIJD_01003 1.9e-183 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
NMCIJIJD_01004 1.7e-233 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
NMCIJIJD_01005 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NMCIJIJD_01006 3.4e-188 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
NMCIJIJD_01007 1.2e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
NMCIJIJD_01008 5.8e-266 argH 4.3.2.1 E argininosuccinate lyase
NMCIJIJD_01009 2.4e-85 bioY S BioY family
NMCIJIJD_01010 1.5e-180 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
NMCIJIJD_01011 5.3e-184 phoH T phosphate starvation-inducible protein PhoH
NMCIJIJD_01012 1.9e-83 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
NMCIJIJD_01013 1.5e-62 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
NMCIJIJD_01014 6.6e-170 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
NMCIJIJD_01015 1.8e-147 recO L Involved in DNA repair and RecF pathway recombination
NMCIJIJD_01016 2e-180 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
NMCIJIJD_01017 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
NMCIJIJD_01018 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
NMCIJIJD_01019 1.7e-207 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
NMCIJIJD_01020 4.8e-221 patA 2.6.1.1 E Aminotransferase
NMCIJIJD_01021 3.8e-128 trmK 2.1.1.217 S SAM-dependent methyltransferase
NMCIJIJD_01022 4.8e-159 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
NMCIJIJD_01023 3.5e-238 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
NMCIJIJD_01024 2.3e-30 S Protein of unknown function (DUF2929)
NMCIJIJD_01025 0.0 dnaE 2.7.7.7 L DNA polymerase
NMCIJIJD_01026 2.1e-271 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
NMCIJIJD_01027 4.2e-169 cvfB S S1 domain
NMCIJIJD_01028 5.7e-166 xerD D recombinase XerD
NMCIJIJD_01029 1.5e-64 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
NMCIJIJD_01030 5.1e-142 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
NMCIJIJD_01031 2e-106 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
NMCIJIJD_01032 9e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
NMCIJIJD_01033 0.0 csd1 3.5.1.28 G domain, Protein
NMCIJIJD_01034 3e-164 yueF S AI-2E family transporter
NMCIJIJD_01035 4.4e-232 brpA K Cell envelope-like function transcriptional attenuator common domain protein
NMCIJIJD_01036 2e-310 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
NMCIJIJD_01037 0.0 M NlpC/P60 family
NMCIJIJD_01038 0.0 S Peptidase, M23
NMCIJIJD_01039 0.0 bamA GM domain, Protein
NMCIJIJD_01040 9.3e-65 gntR1 K Transcriptional regulator, GntR family
NMCIJIJD_01041 7.8e-160 V ABC transporter, ATP-binding protein
NMCIJIJD_01042 1.4e-119
NMCIJIJD_01043 1.2e-146 bacG M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
NMCIJIJD_01044 2e-129 V ABC transporter
NMCIJIJD_01045 9.5e-220 bacI V MacB-like periplasmic core domain
NMCIJIJD_01046 7.3e-41
NMCIJIJD_01047 4.5e-258 S Putative peptidoglycan binding domain
NMCIJIJD_01050 1e-227 2.7.13.3 T GHKL domain
NMCIJIJD_01051 1.1e-138 K LytTr DNA-binding domain
NMCIJIJD_01053 4.7e-252 V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
NMCIJIJD_01054 4.4e-132 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
NMCIJIJD_01056 2.9e-75 osmC O OsmC-like protein
NMCIJIJD_01057 1.4e-181 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NMCIJIJD_01058 4.4e-222 patA 2.6.1.1 E Aminotransferase
NMCIJIJD_01059 8.4e-34
NMCIJIJD_01060 0.0 clpL O associated with various cellular activities
NMCIJIJD_01061 1.7e-207 menC 4.2.1.113 H Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)
NMCIJIJD_01063 3.9e-107 wecD3 K PFAM GCN5-related N-acetyltransferase
NMCIJIJD_01064 2.8e-287 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NMCIJIJD_01065 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
NMCIJIJD_01066 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
NMCIJIJD_01067 5.4e-175 malR K Transcriptional regulator, LacI family
NMCIJIJD_01068 7.2e-217 phbA 2.3.1.9 I Belongs to the thiolase family
NMCIJIJD_01069 1.6e-257 malT G Major Facilitator
NMCIJIJD_01070 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
NMCIJIJD_01071 2.4e-121 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
NMCIJIJD_01072 1.1e-258 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
NMCIJIJD_01073 2.7e-137 puuD S peptidase C26
NMCIJIJD_01074 1.2e-168 yvgN C Aldo keto reductase
NMCIJIJD_01075 6.1e-48 1.14.12.17 S Cupin 2, conserved barrel domain protein
NMCIJIJD_01076 0.0 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
NMCIJIJD_01077 2.3e-87 hmpT S ECF-type riboflavin transporter, S component
NMCIJIJD_01078 6.9e-264 nox C NADH oxidase
NMCIJIJD_01079 1.7e-187 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
NMCIJIJD_01080 1.4e-253 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
NMCIJIJD_01081 2.8e-84
NMCIJIJD_01082 4.1e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
NMCIJIJD_01084 9.6e-115 K Transcriptional regulator, TetR family
NMCIJIJD_01085 2.2e-72
NMCIJIJD_01086 4.4e-275 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
NMCIJIJD_01087 2.7e-277 tagE2 2.4.1.52 GT4 M Poly(Glycerol-phosphate) alpha-glucosyltransferase
NMCIJIJD_01088 3.4e-309 M protein which possibly mediates interactions of S.aureus with components of the extracellular matrix of higher eukaryotes
NMCIJIJD_01089 0.0 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
NMCIJIJD_01090 1.4e-267 G Major Facilitator
NMCIJIJD_01091 1e-259 G Major Facilitator
NMCIJIJD_01092 1.7e-151 K Transcriptional regulator, LacI family
NMCIJIJD_01093 1.1e-250 L PFAM transposase, IS4 family protein
NMCIJIJD_01094 0.0 sprD D Domain of Unknown Function (DUF1542)
NMCIJIJD_01095 9e-167 glsA 3.5.1.2 E Belongs to the glutaminase family
NMCIJIJD_01096 2.5e-255 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
NMCIJIJD_01097 2.8e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
NMCIJIJD_01098 3.5e-235 dltB M MBOAT, membrane-bound O-acyltransferase family
NMCIJIJD_01099 9.1e-297 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
NMCIJIJD_01101 2.6e-61 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
NMCIJIJD_01102 3.2e-214 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NMCIJIJD_01103 3.2e-62 L Toxic component of a toxin-antitoxin (TA) module
NMCIJIJD_01104 2.3e-251 U Belongs to the purine-cytosine permease (2.A.39) family
NMCIJIJD_01105 2.1e-243 codA 3.5.4.1 F cytosine deaminase
NMCIJIJD_01106 4e-147 tesE Q hydratase
NMCIJIJD_01107 2.8e-114 S (CBS) domain
NMCIJIJD_01108 8.7e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
NMCIJIJD_01109 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NMCIJIJD_01110 2.1e-39 yabO J S4 domain protein
NMCIJIJD_01111 6.6e-57 divIC D Septum formation initiator
NMCIJIJD_01112 9.8e-67 yabR J RNA binding
NMCIJIJD_01113 1.3e-268 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
NMCIJIJD_01114 1.5e-97 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
NMCIJIJD_01115 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NMCIJIJD_01116 3.6e-171 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
NMCIJIJD_01117 2.2e-190 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NMCIJIJD_01118 1.6e-293 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
NMCIJIJD_01119 1.1e-288 O Arylsulfotransferase (ASST)
NMCIJIJD_01120 1.5e-94 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NMCIJIJD_01121 7.3e-97 L nuclease
NMCIJIJD_01122 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
NMCIJIJD_01123 3.3e-71
NMCIJIJD_01124 6.7e-104 fic D Fic/DOC family
NMCIJIJD_01125 1.1e-127 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
NMCIJIJD_01126 0.0
NMCIJIJD_01127 0.0
NMCIJIJD_01128 5.4e-25
NMCIJIJD_01129 1.5e-161 hipB K Helix-turn-helix
NMCIJIJD_01130 4.7e-57 yitW S Iron-sulfur cluster assembly protein
NMCIJIJD_01131 7.2e-272 sufB O assembly protein SufB
NMCIJIJD_01132 6.5e-81 nifU C SUF system FeS assembly protein, NifU family
NMCIJIJD_01133 2.7e-238 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
NMCIJIJD_01134 1.4e-242 sufD O FeS assembly protein SufD
NMCIJIJD_01135 6.5e-145 sufC O FeS assembly ATPase SufC
NMCIJIJD_01136 1.7e-33 feoA P FeoA domain
NMCIJIJD_01137 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
NMCIJIJD_01138 9.1e-275 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
NMCIJIJD_01139 2.2e-156 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
NMCIJIJD_01140 1.2e-64 ydiI Q Thioesterase superfamily
NMCIJIJD_01141 2.4e-109 yvrI K RNA polymerase sigma factor, sigma-70 family
NMCIJIJD_01142 6.1e-208 G Transporter, major facilitator family protein
NMCIJIJD_01143 0.0 S Bacterial membrane protein YfhO
NMCIJIJD_01144 7.8e-105 T Ion transport 2 domain protein
NMCIJIJD_01145 6e-182 rihA F Inosine-uridine preferring nucleoside hydrolase
NMCIJIJD_01147 0.0 L PLD-like domain
NMCIJIJD_01148 1.2e-103 mrr L restriction endonuclease
NMCIJIJD_01149 1.9e-68 L restriction endonuclease
NMCIJIJD_01150 1.6e-171 L restriction endonuclease
NMCIJIJD_01151 3.8e-201 3.1.21.3 L Type I restriction modification DNA specificity domain
NMCIJIJD_01152 8.1e-179 L Belongs to the 'phage' integrase family
NMCIJIJD_01153 9.5e-212 hsdS-1 3.1.21.3 L Type I restriction modification DNA specificity domain
NMCIJIJD_01154 2.6e-297 hsdM 2.1.1.72 V type I restriction-modification system
NMCIJIJD_01155 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
NMCIJIJD_01156 2.8e-58 yhaI S Protein of unknown function (DUF805)
NMCIJIJD_01157 2.2e-44
NMCIJIJD_01158 2.4e-22
NMCIJIJD_01159 4.2e-47
NMCIJIJD_01160 1.7e-96 K Acetyltransferase (GNAT) domain
NMCIJIJD_01161 7e-297 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
NMCIJIJD_01162 3.9e-235 gntT EG Gluconate
NMCIJIJD_01163 5.2e-184 K Transcriptional regulator, LacI family
NMCIJIJD_01164 5.2e-292 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
NMCIJIJD_01165 8.5e-96
NMCIJIJD_01166 2.1e-25
NMCIJIJD_01167 8.7e-63 asp S Asp23 family, cell envelope-related function
NMCIJIJD_01168 1.2e-91 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
NMCIJIJD_01170 1.9e-50
NMCIJIJD_01171 3.7e-69 yqkB S Belongs to the HesB IscA family
NMCIJIJD_01172 1e-110 K Bacterial regulatory proteins, tetR family
NMCIJIJD_01173 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NMCIJIJD_01174 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NMCIJIJD_01175 1.1e-206 ykiI
NMCIJIJD_01176 6.8e-119 pilD 3.4.23.43 NOU Type II secretory pathway prepilin signal peptidase PulO and related peptidases
NMCIJIJD_01177 3.9e-72 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
NMCIJIJD_01178 2.4e-83 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
NMCIJIJD_01179 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
NMCIJIJD_01180 2.9e-251 L Transposase
NMCIJIJD_01181 3.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
NMCIJIJD_01182 1.5e-118 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
NMCIJIJD_01183 5.5e-107 rplD J Forms part of the polypeptide exit tunnel
NMCIJIJD_01184 5.7e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
NMCIJIJD_01185 4.2e-150 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
NMCIJIJD_01186 1.4e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
NMCIJIJD_01187 2.8e-52 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
NMCIJIJD_01188 6.1e-112 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
NMCIJIJD_01189 3.5e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
NMCIJIJD_01190 8.4e-28 rpmC J Belongs to the universal ribosomal protein uL29 family
NMCIJIJD_01191 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
NMCIJIJD_01192 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
NMCIJIJD_01193 2.6e-49 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
NMCIJIJD_01194 1.1e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
NMCIJIJD_01195 1.3e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
NMCIJIJD_01196 3.2e-95 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
NMCIJIJD_01197 6.6e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
NMCIJIJD_01198 2.2e-85 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
NMCIJIJD_01199 2.9e-24 rpmD J Ribosomal protein L30
NMCIJIJD_01200 8.9e-64 rplO J Binds to the 23S rRNA
NMCIJIJD_01201 8.8e-240 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
NMCIJIJD_01202 8.1e-125 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
NMCIJIJD_01203 1.2e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
NMCIJIJD_01204 1.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
NMCIJIJD_01205 3.6e-58 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
NMCIJIJD_01206 2.3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
NMCIJIJD_01207 2.8e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NMCIJIJD_01208 1.1e-62 rplQ J Ribosomal protein L17
NMCIJIJD_01209 1.1e-147 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
NMCIJIJD_01210 2e-155 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
NMCIJIJD_01211 4.4e-141 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
NMCIJIJD_01212 1.2e-143 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
NMCIJIJD_01213 9.1e-80 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
NMCIJIJD_01214 5.6e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
NMCIJIJD_01215 5.5e-141 IQ reductase
NMCIJIJD_01216 1e-113 acmC 3.2.1.96 NU mannosyl-glycoprotein
NMCIJIJD_01217 3.5e-100 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
NMCIJIJD_01218 5.5e-214 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
NMCIJIJD_01219 5.1e-170 znuA P Belongs to the bacterial solute-binding protein 9 family
NMCIJIJD_01220 1e-122 fhuC P ABC transporter
NMCIJIJD_01221 1.1e-120 znuB U ABC 3 transport family
NMCIJIJD_01222 2.6e-149 purR 2.4.2.7 F pur operon repressor
NMCIJIJD_01223 7.5e-242 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
NMCIJIJD_01224 3.2e-178 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NMCIJIJD_01225 1.5e-50
NMCIJIJD_01226 2.4e-150 yxeH S hydrolase
NMCIJIJD_01227 3.5e-271 ywfO S HD domain protein
NMCIJIJD_01228 1.3e-156 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
NMCIJIJD_01229 2.2e-90
NMCIJIJD_01230 5.3e-15
NMCIJIJD_01231 9.2e-69 S Bacteriophage holin of superfamily 6 (Holin_LLH)
NMCIJIJD_01232 1.2e-208 ps461 3.5.1.104 M hydrolase, family 25
NMCIJIJD_01235 1e-167 I alpha/beta hydrolase fold
NMCIJIJD_01236 3.9e-116 frnE Q DSBA-like thioredoxin domain
NMCIJIJD_01237 3.6e-55
NMCIJIJD_01238 2.7e-07 L Transposase
NMCIJIJD_01247 4.9e-134 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
NMCIJIJD_01248 2.8e-140 accA 2.1.3.15, 6.4.1.2 I alpha subunit
NMCIJIJD_01249 4.6e-134 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
NMCIJIJD_01250 6.9e-95 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
NMCIJIJD_01251 7.6e-106 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
NMCIJIJD_01252 1.9e-49 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
NMCIJIJD_01253 2.7e-10 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
NMCIJIJD_01254 1.9e-28 IQ reductase
NMCIJIJD_01255 6.3e-66 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
NMCIJIJD_01256 2.9e-51 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
NMCIJIJD_01257 1.7e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
NMCIJIJD_01258 2.2e-179 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
NMCIJIJD_01259 4.2e-77 marR K Transcriptional regulator, MarR family
NMCIJIJD_01260 6.6e-72 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
NMCIJIJD_01262 3.5e-202 xerS L Belongs to the 'phage' integrase family
NMCIJIJD_01266 4e-60 mleP3 S Membrane transport protein
NMCIJIJD_01268 7.8e-123 T Transcriptional regulatory protein, C terminal
NMCIJIJD_01269 3.7e-246 T GHKL domain
NMCIJIJD_01270 1.7e-111 S Peptidase propeptide and YPEB domain
NMCIJIJD_01271 7.3e-230 4.4.1.8 E Aminotransferase, class I
NMCIJIJD_01272 1.8e-100 M Protein of unknown function (DUF3737)
NMCIJIJD_01273 3.9e-56 yphJ 4.1.1.44 S decarboxylase
NMCIJIJD_01274 2.6e-58 L Transposase and inactivated derivatives
NMCIJIJD_01277 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
NMCIJIJD_01278 4.8e-137 K LytTr DNA-binding domain
NMCIJIJD_01279 1.9e-74 2.7.13.3 T GHKL domain
NMCIJIJD_01280 1.4e-110 K transcriptional regulator
NMCIJIJD_01281 5.1e-302 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
NMCIJIJD_01282 2.5e-36 copZ P PFAM Heavy metal transport detoxification protein
NMCIJIJD_01283 4.8e-99 dps P Belongs to the Dps family
NMCIJIJD_01284 5.8e-112 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
NMCIJIJD_01285 0.0 tolA M M26 IgA1-specific Metallo-endopeptidase C-terminal region
NMCIJIJD_01286 8.7e-60
NMCIJIJD_01287 2.3e-48 sugE U Multidrug resistance protein
NMCIJIJD_01288 6.3e-61 S Protein of unknown function (DUF3021)
NMCIJIJD_01289 1.4e-75 K LytTr DNA-binding domain
NMCIJIJD_01290 3.7e-146 cylB V ABC-2 type transporter
NMCIJIJD_01291 2e-129 cylA V ABC transporter
NMCIJIJD_01292 5.7e-52
NMCIJIJD_01294 8e-208 amtB P ammonium transporter
NMCIJIJD_01295 4.7e-257 gor 1.8.1.7 C pyridine nucleotide-disulfide oxidoreductase
NMCIJIJD_01296 2.7e-85 yvbK 3.1.3.25 K GNAT family
NMCIJIJD_01297 2.5e-92
NMCIJIJD_01298 4e-124 pnb C nitroreductase
NMCIJIJD_01299 6.3e-63 XK27_00915 C Luciferase-like monooxygenase
NMCIJIJD_01300 1.9e-92 XK27_00915 C Luciferase-like monooxygenase
NMCIJIJD_01301 1.1e-250 L PFAM transposase, IS4 family protein
NMCIJIJD_01303 8.7e-278 pipD E Dipeptidase
NMCIJIJD_01304 0.0 yjbQ P TrkA C-terminal domain protein
NMCIJIJD_01305 2.7e-25 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
NMCIJIJD_01306 5.4e-294 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
NMCIJIJD_01307 5.3e-92
NMCIJIJD_01308 1.2e-38
NMCIJIJD_01309 2.6e-76 K DNA-templated transcription, initiation
NMCIJIJD_01310 8.8e-133
NMCIJIJD_01311 1e-69 K Transcriptional regulator, HxlR family
NMCIJIJD_01312 1.8e-168 brpA K Cell envelope-like function transcriptional attenuator common domain protein
NMCIJIJD_01313 1.5e-147 epsB M biosynthesis protein
NMCIJIJD_01314 6e-124 ywqD 2.7.10.1 D Capsular exopolysaccharide family
NMCIJIJD_01315 5.9e-120 rfbP M Bacterial sugar transferase
NMCIJIJD_01316 5.8e-163 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
NMCIJIJD_01317 5.5e-109 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
NMCIJIJD_01318 8.3e-201 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
NMCIJIJD_01319 1.6e-188 M family 8
NMCIJIJD_01320 3.3e-186 GT2 M Glycosyltransferase like family 2
NMCIJIJD_01321 6.1e-193 M Glycosyl transferase, family 2
NMCIJIJD_01322 4.7e-238 S Psort location CytoplasmicMembrane, score 9.99
NMCIJIJD_01323 6.2e-244 S polysaccharide biosynthetic process
NMCIJIJD_01324 8.6e-220 glf 5.4.99.9 M UDP-galactopyranose mutase
NMCIJIJD_01325 6.8e-161 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
NMCIJIJD_01327 1.1e-71 S TM2 domain
NMCIJIJD_01329 2.4e-104
NMCIJIJD_01330 4e-56 YPO0284 GM NAD(P)H-binding
NMCIJIJD_01333 1.7e-66 E Preprotein translocase subunit SecB
NMCIJIJD_01334 3.7e-176 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
NMCIJIJD_01335 1.1e-251 mmuP E amino acid
NMCIJIJD_01337 8.8e-68 T Toxin-antitoxin system, toxin component, MazF family
NMCIJIJD_01338 1e-37
NMCIJIJD_01339 4.4e-06 D nuclear chromosome segregation
NMCIJIJD_01340 0.0 snf 2.7.11.1 KL domain protein
NMCIJIJD_01341 6.3e-145 ywqE 3.1.3.48 GM PHP domain protein
NMCIJIJD_01342 2.3e-183 M Glycosyl hydrolases family 25
NMCIJIJD_01343 1e-212 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
NMCIJIJD_01344 0.0 sbcC L Putative exonuclease SbcCD, C subunit
NMCIJIJD_01345 5.9e-76 luxA C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
NMCIJIJD_01346 2e-152
NMCIJIJD_01347 1.2e-16 3.2.1.14 GH18
NMCIJIJD_01348 1.5e-82 zur P Belongs to the Fur family
NMCIJIJD_01349 2.1e-105 gmk2 2.7.4.8 F Guanylate kinase
NMCIJIJD_01350 6.9e-74 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
NMCIJIJD_01351 5.4e-256 yfnA E Amino Acid
NMCIJIJD_01352 1.7e-235 EGP Sugar (and other) transporter
NMCIJIJD_01353 6.7e-232
NMCIJIJD_01354 1.7e-209 potD P ABC transporter
NMCIJIJD_01355 2.9e-140 potC P ABC transporter permease
NMCIJIJD_01356 1e-145 potB P ABC transporter permease
NMCIJIJD_01357 2e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
NMCIJIJD_01358 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
NMCIJIJD_01359 1.3e-178 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
NMCIJIJD_01360 0.0 pacL 3.6.3.8 P P-type ATPase
NMCIJIJD_01361 2.6e-85 dps P Belongs to the Dps family
NMCIJIJD_01362 5.9e-258 yagE E amino acid
NMCIJIJD_01363 7.2e-118 gph 3.1.3.18 S HAD hydrolase, family IA, variant
NMCIJIJD_01364 5.4e-161 3.6.4.12 S PD-(D/E)XK nuclease family transposase
NMCIJIJD_01366 2.7e-23 S Domain of unknown function (DUF4767)
NMCIJIJD_01367 1.8e-116 lssY 3.6.1.27 I Acid phosphatase homologues
NMCIJIJD_01368 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
NMCIJIJD_01369 1.1e-231 clcA_2 P Chloride transporter, ClC family
NMCIJIJD_01370 8.5e-119 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
NMCIJIJD_01371 1.8e-150 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
NMCIJIJD_01372 4e-142 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
NMCIJIJD_01373 1.2e-51
NMCIJIJD_01374 0.0 S SEC-C Motif Domain Protein
NMCIJIJD_01375 8.5e-120 ybhL S Belongs to the BI1 family
NMCIJIJD_01376 1.5e-252 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
NMCIJIJD_01377 3.3e-22 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
NMCIJIJD_01378 2.7e-48 yafQ S Bacterial toxin of type II toxin-antitoxin system, YafQ
NMCIJIJD_01379 5e-119 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
NMCIJIJD_01380 1.7e-56 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
NMCIJIJD_01381 7.5e-58 ytzB S Small secreted protein
NMCIJIJD_01382 2.6e-169 glsA 3.5.1.2 E Belongs to the glutaminase family
NMCIJIJD_01383 7.1e-186 iolS C Aldo keto reductase
NMCIJIJD_01384 9.3e-270 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
NMCIJIJD_01385 4.6e-10 D nuclear chromosome segregation
NMCIJIJD_01386 2e-131 yfeJ 6.3.5.2 F glutamine amidotransferase
NMCIJIJD_01387 1.5e-64 yneR
NMCIJIJD_01388 3.1e-164 akr5f 1.1.1.346 S reductase
NMCIJIJD_01389 2.8e-157 K Transcriptional regulator
NMCIJIJD_01390 4.7e-185 ansA 3.5.1.1 EJ L-asparaginase, type I
NMCIJIJD_01391 6.4e-166 ypuA S Protein of unknown function (DUF1002)
NMCIJIJD_01392 1.1e-95 padR K Virulence activator alpha C-term
NMCIJIJD_01393 6.3e-30 padC Q Phenolic acid decarboxylase
NMCIJIJD_01394 3.7e-53 padC Q Phenolic acid decarboxylase
NMCIJIJD_01395 2.2e-159 S Alpha beta hydrolase
NMCIJIJD_01396 9.4e-32 S thiolester hydrolase activity
NMCIJIJD_01397 2e-89 lacA S transferase hexapeptide repeat
NMCIJIJD_01398 6e-160 K Transcriptional regulator
NMCIJIJD_01399 9e-89 C Flavodoxin
NMCIJIJD_01400 5.4e-169 S Oxidoreductase, aldo keto reductase family protein
NMCIJIJD_01401 4e-184 1.1.1.1 C nadph quinone reductase
NMCIJIJD_01402 5.1e-56 yphJ 4.1.1.44 S decarboxylase
NMCIJIJD_01403 1.8e-46 V Beta-lactamase
NMCIJIJD_01404 1.1e-250 L PFAM transposase, IS4 family protein
NMCIJIJD_01405 1.1e-57 K Helix-turn-helix domain
NMCIJIJD_01407 4.8e-257 gabT 2.6.1.19 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
NMCIJIJD_01408 4.3e-267 yfnA E amino acid
NMCIJIJD_01409 9.9e-120 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NMCIJIJD_01410 5e-44 1.3.5.4 S FMN binding
NMCIJIJD_01411 1.3e-221 norA EGP Major facilitator Superfamily
NMCIJIJD_01412 3.6e-171 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
NMCIJIJD_01413 6.7e-156 metQ1 P Belongs to the nlpA lipoprotein family
NMCIJIJD_01414 1.9e-192 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NMCIJIJD_01415 3.1e-103 metI P ABC transporter permease
NMCIJIJD_01416 4.4e-219 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
NMCIJIJD_01417 2.4e-253 clcA P chloride
NMCIJIJD_01418 2e-79 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
NMCIJIJD_01419 2e-104 proW P ABC transporter, permease protein
NMCIJIJD_01420 1.7e-142 proV E ABC transporter, ATP-binding protein
NMCIJIJD_01421 4.3e-110 proWZ P ABC transporter permease
NMCIJIJD_01422 2.1e-163 proX M ABC transporter, substrate-binding protein, QAT family
NMCIJIJD_01423 2.1e-76 K Transcriptional regulator
NMCIJIJD_01424 8.4e-09 1.6.5.2 GM NAD(P)H-binding
NMCIJIJD_01425 9.2e-228 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
NMCIJIJD_01426 0.0 cadA P P-type ATPase
NMCIJIJD_01427 4.3e-119 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
NMCIJIJD_01428 4.9e-128
NMCIJIJD_01429 2.5e-55 S Sugar efflux transporter for intercellular exchange
NMCIJIJD_01430 2.2e-257 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
NMCIJIJD_01432 0.0 L Helicase C-terminal domain protein
NMCIJIJD_01433 1.1e-86 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I PAP2 superfamily
NMCIJIJD_01434 1.8e-181 S Aldo keto reductase
NMCIJIJD_01436 5e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
NMCIJIJD_01437 4.5e-62 psiE S Phosphate-starvation-inducible E
NMCIJIJD_01438 5.5e-103 ydeN S Serine hydrolase
NMCIJIJD_01440 8.3e-185 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
NMCIJIJD_01441 1.6e-174 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
NMCIJIJD_01443 8.2e-34
NMCIJIJD_01444 6.4e-07 S regulation of transcription, DNA-dependent
NMCIJIJD_01445 7.9e-128 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
NMCIJIJD_01446 3.2e-194 L Belongs to the 'phage' integrase family
NMCIJIJD_01449 1.7e-27
NMCIJIJD_01450 9.6e-140 L Psort location Cytoplasmic, score
NMCIJIJD_01451 5.1e-107 S Protein of unknown function (DUF669)
NMCIJIJD_01452 1.3e-125 S AAA domain
NMCIJIJD_01453 3.3e-89 S Bacteriophage Mu Gam like protein
NMCIJIJD_01458 1.7e-37
NMCIJIJD_01459 2.2e-45
NMCIJIJD_01462 2.6e-13
NMCIJIJD_01463 3.1e-50 ps115 K Helix-turn-helix XRE-family like proteins
NMCIJIJD_01464 3.2e-21 E Zn peptidase
NMCIJIJD_01465 3.5e-97 kch J Ion transport protein
NMCIJIJD_01466 1.3e-28
NMCIJIJD_01468 1.9e-57 L nuclease
NMCIJIJD_01469 1.2e-193
NMCIJIJD_01471 7.5e-52
NMCIJIJD_01472 3.6e-210 L Belongs to the 'phage' integrase family
NMCIJIJD_01473 2.1e-45 rpmA J Belongs to the bacterial ribosomal protein bL27 family
NMCIJIJD_01474 1.6e-54 ysxB J Cysteine protease Prp
NMCIJIJD_01475 5.2e-50 rplU J This protein binds to 23S rRNA in the presence of protein L20
NMCIJIJD_01476 2.6e-112 K Transcriptional regulator
NMCIJIJD_01479 2.9e-90 dut S Protein conserved in bacteria
NMCIJIJD_01480 9.8e-178
NMCIJIJD_01481 6.1e-152
NMCIJIJD_01482 4.8e-51 S Iron-sulfur cluster assembly protein
NMCIJIJD_01483 5e-101 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NMCIJIJD_01484 8.7e-156 P Belongs to the nlpA lipoprotein family
NMCIJIJD_01485 3.9e-12
NMCIJIJD_01486 1.5e-225 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
NMCIJIJD_01487 4e-297 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NMCIJIJD_01488 6.2e-265 glnA 6.3.1.2 E glutamine synthetase
NMCIJIJD_01489 3e-178 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
NMCIJIJD_01490 5.9e-22 S Protein of unknown function (DUF3042)
NMCIJIJD_01491 9.1e-68 yqhL P Rhodanese-like protein
NMCIJIJD_01492 1.5e-183 glk 2.7.1.2 G Glucokinase
NMCIJIJD_01493 7.4e-36 yqgQ S Bacterial protein of unknown function (DUF910)
NMCIJIJD_01494 4.2e-113 gluP 3.4.21.105 S Peptidase, S54 family
NMCIJIJD_01495 4e-101 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
NMCIJIJD_01496 4.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
NMCIJIJD_01497 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
NMCIJIJD_01498 0.0 S membrane
NMCIJIJD_01499 8.8e-71 yneR S Belongs to the HesB IscA family
NMCIJIJD_01500 1.4e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
NMCIJIJD_01501 2.5e-118 udk 2.7.1.48 F Cytidine monophosphokinase
NMCIJIJD_01502 6e-117 rlpA M PFAM NLP P60 protein
NMCIJIJD_01503 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
NMCIJIJD_01504 1.3e-198 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
NMCIJIJD_01505 6.7e-59 yodB K Transcriptional regulator, HxlR family
NMCIJIJD_01506 1.8e-92 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
NMCIJIJD_01507 1.3e-145 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NMCIJIJD_01508 7e-46 acyP 3.6.1.7 C Belongs to the acylphosphatase family
NMCIJIJD_01509 9.1e-170 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
NMCIJIJD_01510 2.9e-72 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
NMCIJIJD_01511 1.7e-235 V MatE
NMCIJIJD_01512 1.8e-268 yjeM E Amino Acid
NMCIJIJD_01513 3.1e-278 arlS 2.7.13.3 T Histidine kinase
NMCIJIJD_01514 1.5e-121 K response regulator
NMCIJIJD_01515 1.1e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
NMCIJIJD_01516 2.9e-99 yceD S Uncharacterized ACR, COG1399
NMCIJIJD_01517 2e-216 ylbM S Belongs to the UPF0348 family
NMCIJIJD_01518 3.1e-141 yqeM Q Methyltransferase
NMCIJIJD_01519 4.9e-60 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
NMCIJIJD_01520 3.5e-114 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
NMCIJIJD_01521 1.3e-124 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
NMCIJIJD_01522 1.9e-47 yhbY J RNA-binding protein
NMCIJIJD_01523 1.3e-218 yqeH S Ribosome biogenesis GTPase YqeH
NMCIJIJD_01524 1.3e-96 yqeG S HAD phosphatase, family IIIA
NMCIJIJD_01525 3.3e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
NMCIJIJD_01526 2.3e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
NMCIJIJD_01527 3.7e-85 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
NMCIJIJD_01528 1.8e-173 dnaI L Primosomal protein DnaI
NMCIJIJD_01529 3.8e-230 dnaB L replication initiation and membrane attachment
NMCIJIJD_01530 1.3e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
NMCIJIJD_01531 9.3e-104 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NMCIJIJD_01532 2.6e-160 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
NMCIJIJD_01533 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NMCIJIJD_01534 1e-119 yoaK S Protein of unknown function (DUF1275)
NMCIJIJD_01535 3.3e-85 L PFAM transposase IS200-family protein
NMCIJIJD_01536 1.6e-260 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
NMCIJIJD_01537 2.4e-147 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
NMCIJIJD_01538 2.5e-149 E Glyoxalase-like domain
NMCIJIJD_01539 7.5e-155 glcU U sugar transport
NMCIJIJD_01540 4.9e-226 dhaT 1.1.1.1, 1.1.1.202 C Dehydrogenase
NMCIJIJD_01541 2.2e-96 S reductase
NMCIJIJD_01543 4.7e-88 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
NMCIJIJD_01544 7e-181 ABC-SBP S ABC transporter
NMCIJIJD_01545 9.2e-89 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
NMCIJIJD_01546 1.7e-219 htrA 3.4.21.107 O serine protease
NMCIJIJD_01547 1.2e-154 vicX 3.1.26.11 S domain protein
NMCIJIJD_01548 4.4e-152 yycI S YycH protein
NMCIJIJD_01549 2.4e-250 yycH S YycH protein
NMCIJIJD_01550 0.0 vicK 2.7.13.3 T Histidine kinase
NMCIJIJD_01551 4e-130 K response regulator
NMCIJIJD_01553 0.0 lmrA 3.6.3.44 V ABC transporter
NMCIJIJD_01554 4.3e-74 K helix_turn_helix multiple antibiotic resistance protein
NMCIJIJD_01556 1.5e-100 K DNA-binding helix-turn-helix protein
NMCIJIJD_01557 1e-154 S Polyphosphate nucleotide phosphotransferase, PPK2 family
NMCIJIJD_01558 3.1e-61
NMCIJIJD_01559 1.3e-208 yttB EGP Major facilitator Superfamily
NMCIJIJD_01560 5.3e-235 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
NMCIJIJD_01561 2e-74 rplI J Binds to the 23S rRNA
NMCIJIJD_01562 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
NMCIJIJD_01563 1.6e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
NMCIJIJD_01564 7.5e-79 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
NMCIJIJD_01565 1.2e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
NMCIJIJD_01566 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NMCIJIJD_01567 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NMCIJIJD_01568 1.1e-206 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
NMCIJIJD_01569 1.7e-34 yaaA S S4 domain protein YaaA
NMCIJIJD_01570 2.2e-207 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
NMCIJIJD_01571 2.2e-251 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
NMCIJIJD_01572 3.4e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
NMCIJIJD_01573 2e-58 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
NMCIJIJD_01574 4.5e-130 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
NMCIJIJD_01575 2.4e-136 jag S R3H domain protein
NMCIJIJD_01576 4.2e-256 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
NMCIJIJD_01577 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
NMCIJIJD_01578 0.0 asnB 6.3.5.4 E Asparagine synthase
NMCIJIJD_01579 9.9e-299 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NMCIJIJD_01580 2.2e-248 yxbA 6.3.1.12 S ATP-grasp enzyme
NMCIJIJD_01581 1.7e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
NMCIJIJD_01582 9.5e-94 2.3.1.183 M Acetyltransferase GNAT family
NMCIJIJD_01583 1.2e-165 S reductase
NMCIJIJD_01584 3.2e-305 S amidohydrolase
NMCIJIJD_01585 3.4e-266 K Aminotransferase class I and II
NMCIJIJD_01586 7.4e-121 azlC E azaleucine resistance protein AzlC
NMCIJIJD_01587 7.1e-50 azlD E Branched-chain amino acid transport
NMCIJIJD_01588 2e-131 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
NMCIJIJD_01590 3.1e-107 K Bacterial regulatory proteins, tetR family
NMCIJIJD_01591 8.4e-191 ybhR V ABC transporter
NMCIJIJD_01592 5e-128 ybhF_2 V AAA domain, putative AbiEii toxin, Type IV TA system
NMCIJIJD_01593 6.9e-33 S GyrI-like small molecule binding domain
NMCIJIJD_01594 1.8e-71 S GyrI-like small molecule binding domain
NMCIJIJD_01595 8.3e-125 yhiD S MgtC family
NMCIJIJD_01596 1.9e-95 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
NMCIJIJD_01597 1.1e-197 V Beta-lactamase
NMCIJIJD_01598 1.1e-74 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NMCIJIJD_01599 5.9e-48 XK27_08850 S Aminoacyl-tRNA editing domain
NMCIJIJD_01600 6.8e-122 K LytTr DNA-binding domain
NMCIJIJD_01601 2.5e-74 2.7.13.3 T GHKL domain
NMCIJIJD_01602 6.1e-60 MA20_27270 S mazG nucleotide pyrophosphohydrolase
NMCIJIJD_01603 4.7e-108 engB D Necessary for normal cell division and for the maintenance of normal septation
NMCIJIJD_01604 6.2e-235 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
NMCIJIJD_01605 2.8e-238 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
NMCIJIJD_01606 3.8e-226 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
NMCIJIJD_01607 1.1e-164 S Tetratricopeptide repeat
NMCIJIJD_01608 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NMCIJIJD_01609 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
NMCIJIJD_01610 5.1e-35 rpsT J Binds directly to 16S ribosomal RNA
NMCIJIJD_01611 1.8e-147 holA 2.7.7.7 L DNA polymerase III delta subunit
NMCIJIJD_01612 0.0 comEC S Competence protein ComEC
NMCIJIJD_01613 3.1e-89 comEB 3.5.4.12 F ComE operon protein 2
NMCIJIJD_01614 1.1e-81 comEA L Competence protein ComEA
NMCIJIJD_01615 7.1e-200 ylbL T Belongs to the peptidase S16 family
NMCIJIJD_01616 2.3e-90 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
NMCIJIJD_01617 3.8e-99 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
NMCIJIJD_01618 3e-44 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
NMCIJIJD_01619 2.8e-224 ftsW D Belongs to the SEDS family
NMCIJIJD_01620 0.0 typA T GTP-binding protein TypA
NMCIJIJD_01621 4.4e-138 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
NMCIJIJD_01622 4.6e-48 yktA S Belongs to the UPF0223 family
NMCIJIJD_01623 1.1e-275 lpdA 1.8.1.4 C Dehydrogenase
NMCIJIJD_01624 3.4e-231 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
NMCIJIJD_01625 8.1e-182 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
NMCIJIJD_01626 6.8e-209 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
NMCIJIJD_01627 1.3e-102 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
NMCIJIJD_01628 3.6e-82
NMCIJIJD_01629 9.8e-32 ykzG S Belongs to the UPF0356 family
NMCIJIJD_01630 3.8e-184 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic
NMCIJIJD_01631 9.7e-29
NMCIJIJD_01632 4.3e-131 mltD CBM50 M NlpC P60 family protein
NMCIJIJD_01634 5.9e-58
NMCIJIJD_01635 1.8e-212 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
NMCIJIJD_01636 1.4e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NMCIJIJD_01637 8.3e-221 patA 2.6.1.1 E Aminotransferase
NMCIJIJD_01638 4.6e-143 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
NMCIJIJD_01639 5.3e-175 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NMCIJIJD_01640 1e-223 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
NMCIJIJD_01641 6.7e-77 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
NMCIJIJD_01642 4.5e-252 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
NMCIJIJD_01643 9.4e-261 lysC 2.7.2.4 E Belongs to the aspartokinase family
NMCIJIJD_01644 1.2e-188 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
NMCIJIJD_01645 2.8e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NMCIJIJD_01646 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
NMCIJIJD_01647 9e-119 S Repeat protein
NMCIJIJD_01648 3.4e-123 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
NMCIJIJD_01649 1.8e-225 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
NMCIJIJD_01650 7.5e-58 XK27_04120 S Putative amino acid metabolism
NMCIJIJD_01651 2.2e-218 iscS 2.8.1.7 E Aminotransferase class V
NMCIJIJD_01652 1e-125 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NMCIJIJD_01654 1.1e-98 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
NMCIJIJD_01655 4.2e-32 cspA K Cold shock protein
NMCIJIJD_01656 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NMCIJIJD_01657 1.9e-42 divIVA D DivIVA domain protein
NMCIJIJD_01658 1.7e-145 ylmH S S4 domain protein
NMCIJIJD_01659 4.9e-41 yggT S YGGT family
NMCIJIJD_01660 9.4e-71 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
NMCIJIJD_01661 5.3e-226 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
NMCIJIJD_01662 1.1e-253 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
NMCIJIJD_01663 1e-148 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
NMCIJIJD_01664 1e-204 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NMCIJIJD_01665 1.2e-263 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
NMCIJIJD_01666 2.6e-180 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NMCIJIJD_01667 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
NMCIJIJD_01668 1.5e-56 ftsL D Cell division protein FtsL
NMCIJIJD_01669 3.2e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
NMCIJIJD_01670 3.1e-77 mraZ K Belongs to the MraZ family
NMCIJIJD_01671 1.7e-57
NMCIJIJD_01672 1.2e-10 S Protein of unknown function (DUF4044)
NMCIJIJD_01673 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
NMCIJIJD_01674 1e-95 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
NMCIJIJD_01675 9.7e-163 rrmA 2.1.1.187 H Methyltransferase
NMCIJIJD_01676 3.1e-184 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
NMCIJIJD_01677 1.4e-192 L Helix-turn-helix domain
NMCIJIJD_01678 3.6e-64 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
NMCIJIJD_01679 6.8e-262 yfnA E amino acid
NMCIJIJD_01680 9.9e-143 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
NMCIJIJD_01681 6.9e-92 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
NMCIJIJD_01682 1.2e-39 ylqC S Belongs to the UPF0109 family
NMCIJIJD_01683 2.2e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
NMCIJIJD_01684 6.1e-250 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NMCIJIJD_01685 1.3e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
NMCIJIJD_01686 5e-186 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
NMCIJIJD_01687 0.0 smc D Required for chromosome condensation and partitioning
NMCIJIJD_01688 4.2e-132 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
NMCIJIJD_01689 2.9e-38 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
NMCIJIJD_01690 3.3e-189 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
NMCIJIJD_01691 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
NMCIJIJD_01692 0.0 yloV S DAK2 domain fusion protein YloV
NMCIJIJD_01693 4.7e-58 asp S Asp23 family, cell envelope-related function
NMCIJIJD_01694 7e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
NMCIJIJD_01695 5.7e-123 thiN 2.7.6.2 H thiamine pyrophosphokinase
NMCIJIJD_01696 1.5e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
NMCIJIJD_01697 2e-166 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
NMCIJIJD_01698 0.0 KLT serine threonine protein kinase
NMCIJIJD_01699 1.5e-132 stp 3.1.3.16 T phosphatase
NMCIJIJD_01700 4.9e-254 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NMCIJIJD_01701 8.5e-176 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NMCIJIJD_01702 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NMCIJIJD_01703 4.6e-219 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
NMCIJIJD_01704 7.7e-32 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
NMCIJIJD_01705 4.2e-115 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
NMCIJIJD_01706 1.7e-54
NMCIJIJD_01707 2.9e-264 recN L May be involved in recombinational repair of damaged DNA
NMCIJIJD_01708 3e-78 argR K Regulates arginine biosynthesis genes
NMCIJIJD_01709 1.8e-150 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
NMCIJIJD_01710 1.6e-160 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
NMCIJIJD_01711 1.5e-43 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
NMCIJIJD_01712 4.5e-239 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
NMCIJIJD_01713 2.4e-153 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
NMCIJIJD_01714 1.2e-70 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NMCIJIJD_01715 2.2e-70 yqhY S Asp23 family, cell envelope-related function
NMCIJIJD_01716 1.8e-113 J 2'-5' RNA ligase superfamily
NMCIJIJD_01717 1.1e-203 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
NMCIJIJD_01718 1.5e-132 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
NMCIJIJD_01719 5.5e-19
NMCIJIJD_01720 4.5e-120 doc
NMCIJIJD_01721 1.9e-188 M Glycosyl hydrolases family 25
NMCIJIJD_01722 4e-78 S Bacteriophage holin of superfamily 6 (Holin_LLH)
NMCIJIJD_01723 2.4e-53
NMCIJIJD_01726 0.0 S Domain of unknown function (DUF2479)
NMCIJIJD_01729 0.0 M CHAP domain
NMCIJIJD_01730 4e-186 S Phage tail protein
NMCIJIJD_01731 0.0 D NLP P60 protein
NMCIJIJD_01732 2e-55
NMCIJIJD_01733 1.5e-77 S Phage tail assembly chaperone protein, TAC
NMCIJIJD_01735 1.8e-127
NMCIJIJD_01736 4.3e-68
NMCIJIJD_01737 2.2e-87
NMCIJIJD_01738 6.4e-60
NMCIJIJD_01739 2.6e-61 S Phage gp6-like head-tail connector protein
NMCIJIJD_01740 1.5e-163
NMCIJIJD_01741 6e-63 S Domain of unknown function (DUF4355)
NMCIJIJD_01743 1.4e-167 S Phage Mu protein F like protein
NMCIJIJD_01744 0.0 S Phage portal protein, SPP1 Gp6-like
NMCIJIJD_01745 7.4e-252 ps334 S Terminase-like family
NMCIJIJD_01746 1.8e-90 ps333 L Terminase small subunit
NMCIJIJD_01747 1.6e-08
NMCIJIJD_01748 1.1e-18
NMCIJIJD_01749 5.1e-102
NMCIJIJD_01751 5.2e-77
NMCIJIJD_01755 3.5e-44
NMCIJIJD_01756 9.5e-209 rny S Endoribonuclease that initiates mRNA decay
NMCIJIJD_01757 7.6e-197 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
NMCIJIJD_01758 1.5e-233 cinA 3.5.1.42 S Belongs to the CinA family
NMCIJIJD_01759 2.5e-101 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NMCIJIJD_01760 6.7e-150 ymfM S Helix-turn-helix domain
NMCIJIJD_01761 2.4e-250 ymfH S Peptidase M16
NMCIJIJD_01762 2.4e-231 ymfF S Peptidase M16 inactive domain protein
NMCIJIJD_01763 1.2e-160 aatB ET ABC transporter substrate-binding protein
NMCIJIJD_01764 7.2e-118 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
NMCIJIJD_01765 3.2e-102 glnP P ABC transporter permease
NMCIJIJD_01766 8.7e-93 mreD M rod shape-determining protein MreD
NMCIJIJD_01767 2.6e-152 mreC M Involved in formation and maintenance of cell shape
NMCIJIJD_01768 1.7e-179 mreB D cell shape determining protein MreB
NMCIJIJD_01769 2.1e-122 radC L DNA repair protein
NMCIJIJD_01770 1.6e-249 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
NMCIJIJD_01771 8.2e-232 ndh 1.6.99.3 C NADH dehydrogenase
NMCIJIJD_01772 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
NMCIJIJD_01773 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
NMCIJIJD_01774 2.8e-185 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
NMCIJIJD_01775 1.5e-272 cydA 1.10.3.14 C ubiquinol oxidase
NMCIJIJD_01776 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
NMCIJIJD_01777 8.5e-229 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NMCIJIJD_01778 3.1e-217 iscS2 2.8.1.7 E Aminotransferase class V
NMCIJIJD_01779 6.7e-240 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
NMCIJIJD_01780 3.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
NMCIJIJD_01781 3.6e-293 gadC E amino acid
NMCIJIJD_01782 3e-170 glsA 3.5.1.2 E Belongs to the glutaminase family
NMCIJIJD_01783 1.1e-286 gadC E amino acid
NMCIJIJD_01784 3.4e-282 gadB 4.1.1.15 E Belongs to the group II decarboxylase family
NMCIJIJD_01785 2.5e-237 pbuG S permease
NMCIJIJD_01786 1.5e-263 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
NMCIJIJD_01787 0.0 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
NMCIJIJD_01788 5.7e-143 S Belongs to the UPF0246 family
NMCIJIJD_01789 2.5e-138 S Membrane
NMCIJIJD_01790 2.8e-75 4.4.1.5 E Glyoxalase
NMCIJIJD_01791 1.5e-21
NMCIJIJD_01792 9e-89 yueI S Protein of unknown function (DUF1694)
NMCIJIJD_01793 8.2e-238 rarA L recombination factor protein RarA
NMCIJIJD_01794 4.4e-46
NMCIJIJD_01795 4.3e-83 usp6 T universal stress protein
NMCIJIJD_01796 1.1e-208 araR K Transcriptional regulator
NMCIJIJD_01797 4.9e-159 ytbE 1.1.1.346 S Aldo keto reductase
NMCIJIJD_01798 2e-100 maa 2.3.1.79 S Maltose O-acetyltransferase
NMCIJIJD_01799 4.4e-285 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
NMCIJIJD_01800 3.7e-139 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
NMCIJIJD_01801 0.0 araB 2.7.1.16 G carbohydrate kinase FGGY
NMCIJIJD_01802 1.5e-261 araP U Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
NMCIJIJD_01803 1.6e-149 2.3.1.19 K Helix-turn-helix XRE-family like proteins
NMCIJIJD_01804 4.8e-218 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
NMCIJIJD_01805 1e-47 gcvH E glycine cleavage
NMCIJIJD_01806 1.1e-220 rodA D Belongs to the SEDS family
NMCIJIJD_01807 1e-31 S Protein of unknown function (DUF2969)
NMCIJIJD_01808 1.9e-178 mbl D Cell shape determining protein MreB Mrl
NMCIJIJD_01809 1.9e-242 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NMCIJIJD_01810 1.3e-33 ywzB S Protein of unknown function (DUF1146)
NMCIJIJD_01811 1.6e-68 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
NMCIJIJD_01812 1.1e-267 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
NMCIJIJD_01813 1.9e-164 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
NMCIJIJD_01814 4e-284 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
NMCIJIJD_01815 5.1e-93 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NMCIJIJD_01816 1.1e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
NMCIJIJD_01817 1.5e-14 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NMCIJIJD_01818 7.3e-124 atpB C it plays a direct role in the translocation of protons across the membrane
NMCIJIJD_01819 5.9e-233 pyrP F Permease
NMCIJIJD_01820 5.2e-131 yibF S overlaps another CDS with the same product name
NMCIJIJD_01821 2.1e-194 yibE S overlaps another CDS with the same product name
NMCIJIJD_01822 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NMCIJIJD_01823 8.6e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
NMCIJIJD_01824 1.2e-233 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
NMCIJIJD_01825 7.2e-197 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
NMCIJIJD_01826 4.9e-170 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
NMCIJIJD_01827 7.2e-195 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
NMCIJIJD_01828 4.6e-108 tdk 2.7.1.21 F thymidine kinase
NMCIJIJD_01829 4e-264 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain
NMCIJIJD_01830 1.4e-135 cobQ S CobB/CobQ-like glutamine amidotransferase domain
NMCIJIJD_01831 1.1e-224 arcD U Amino acid permease
NMCIJIJD_01832 5.2e-262 E Arginine ornithine antiporter
NMCIJIJD_01833 2.7e-79 argR K Regulates arginine biosynthesis genes
NMCIJIJD_01834 4.1e-239 arcA 3.5.3.6 E Arginine
NMCIJIJD_01835 1.9e-197 ampC V Beta-lactamase
NMCIJIJD_01836 5.8e-37
NMCIJIJD_01837 0.0 M domain protein
NMCIJIJD_01838 1.8e-100
NMCIJIJD_01840 7.2e-257 yjcE P Sodium proton antiporter
NMCIJIJD_01841 3.6e-57
NMCIJIJD_01843 1.4e-89
NMCIJIJD_01844 0.0 copA 3.6.3.54 P P-type ATPase
NMCIJIJD_01845 8.3e-50 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
NMCIJIJD_01846 3e-52 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
NMCIJIJD_01847 1.5e-103 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
NMCIJIJD_01848 3.9e-162 EG EamA-like transporter family
NMCIJIJD_01849 1.1e-250 L PFAM transposase, IS4 family protein
NMCIJIJD_01850 6e-208 T GHKL domain
NMCIJIJD_01851 2.8e-131 S Double zinc ribbon
NMCIJIJD_01852 2.3e-184 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
NMCIJIJD_01853 9.5e-183 iunH2 3.2.2.1 F nucleoside hydrolase
NMCIJIJD_01854 2.5e-138 IQ KR domain
NMCIJIJD_01855 1.7e-134 S membrane transporter protein
NMCIJIJD_01856 1.2e-97 S ABC-type cobalt transport system, permease component
NMCIJIJD_01857 1.6e-260 cbiO1 S ABC transporter, ATP-binding protein
NMCIJIJD_01858 8.9e-116 P Cobalt transport protein
NMCIJIJD_01859 1.6e-52 yvlA
NMCIJIJD_01860 0.0 yjcE P Sodium proton antiporter
NMCIJIJD_01861 2.2e-52 ypaA S Protein of unknown function (DUF1304)
NMCIJIJD_01862 1e-192 D Alpha beta
NMCIJIJD_01863 1e-72 K Transcriptional regulator
NMCIJIJD_01864 7.4e-163
NMCIJIJD_01865 5.1e-184 1.6.5.5 C Zinc-binding dehydrogenase
NMCIJIJD_01866 2.7e-258 G PTS system Galactitol-specific IIC component
NMCIJIJD_01867 1.4e-212 EGP Major facilitator Superfamily
NMCIJIJD_01868 4.2e-137 V ABC transporter
NMCIJIJD_01869 3.5e-110
NMCIJIJD_01870 5.2e-14
NMCIJIJD_01871 2.4e-63
NMCIJIJD_01872 5.1e-195 lplA 6.3.1.20 H Lipoate-protein ligase
NMCIJIJD_01873 5.1e-81 uspA T universal stress protein
NMCIJIJD_01874 0.0 tetP J elongation factor G
NMCIJIJD_01875 2.1e-168 GK ROK family
NMCIJIJD_01876 1e-243 brnQ U Component of the transport system for branched-chain amino acids
NMCIJIJD_01877 9.1e-141 aroD S Serine hydrolase (FSH1)
NMCIJIJD_01878 1.2e-244 yagE E amino acid
NMCIJIJD_01879 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
NMCIJIJD_01880 1.2e-134 gntR K UbiC transcription regulator-associated domain protein
NMCIJIJD_01881 1.1e-250 L PFAM transposase, IS4 family protein
NMCIJIJD_01882 1.2e-160 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
NMCIJIJD_01883 6.4e-201 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
NMCIJIJD_01884 4.2e-109 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
NMCIJIJD_01885 1.4e-164 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
NMCIJIJD_01886 8.1e-266 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
NMCIJIJD_01887 0.0 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
NMCIJIJD_01888 3.5e-177 ykoT GT2 M Glycosyl transferase family 2
NMCIJIJD_01889 1.6e-21 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
NMCIJIJD_01890 2.6e-116 M 4-amino-4-deoxy-L-arabinose transferase activity
NMCIJIJD_01891 7.5e-157 S Glycosyltransferase like family
NMCIJIJD_01892 2.2e-153 M Domain of unknown function (DUF4422)
NMCIJIJD_01893 3.7e-179 rgpB GT2 M Glycosyltransferase, group 2 family protein
NMCIJIJD_01894 0.0 S Psort location CytoplasmicMembrane, score
NMCIJIJD_01895 5.4e-281 S Glucosyl transferase GtrII
NMCIJIJD_01896 4.8e-103 M biosynthesis protein
NMCIJIJD_01897 1e-221 cps3F
NMCIJIJD_01898 1.9e-264 rfbX S Membrane protein involved in the export of O-antigen and teichoic acid
NMCIJIJD_01899 1.3e-220 glf 5.4.99.9 M UDP-galactopyranose mutase
NMCIJIJD_01900 0.0 ganB 3.2.1.89 G arabinogalactan
NMCIJIJD_01901 0.0 3.5.1.28 M Ami_3
NMCIJIJD_01902 2.1e-25
NMCIJIJD_01903 0.0 G Peptidase_C39 like family
NMCIJIJD_01906 2.7e-45 rpfI 3.1.3.48 D nuclear chromosome segregation
NMCIJIJD_01907 2.1e-194 yeaN P Transporter, major facilitator family protein
NMCIJIJD_01908 7.5e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
NMCIJIJD_01909 1.4e-275 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
NMCIJIJD_01910 1.9e-40
NMCIJIJD_01911 0.0 lacS G Transporter
NMCIJIJD_01912 1.5e-80 uspA T universal stress protein
NMCIJIJD_01913 2.3e-81 K AsnC family
NMCIJIJD_01914 3.4e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NMCIJIJD_01915 5.9e-154
NMCIJIJD_01916 1e-130 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NMCIJIJD_01917 7.1e-247 purD 6.3.4.13 F Belongs to the GARS family
NMCIJIJD_01918 2.9e-298 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
NMCIJIJD_01919 7.3e-106 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
NMCIJIJD_01920 2.8e-196 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
NMCIJIJD_01921 7.4e-280 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
NMCIJIJD_01922 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NMCIJIJD_01923 1.2e-128 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NMCIJIJD_01924 1.3e-38 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NMCIJIJD_01925 3.9e-133 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
NMCIJIJD_01926 1.4e-253 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
NMCIJIJD_01927 2.5e-222 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
NMCIJIJD_01928 1.1e-83 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
NMCIJIJD_01929 3.5e-134 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
NMCIJIJD_01930 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
NMCIJIJD_01931 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
NMCIJIJD_01932 4.9e-177 K AI-2E family transporter
NMCIJIJD_01933 1.1e-230 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
NMCIJIJD_01934 1.2e-117 thiE 2.5.1.3, 2.7.6.2, 5.4.2.6 S Haloacid dehalogenase-like hydrolase
NMCIJIJD_01935 1.3e-116 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NMCIJIJD_01936 2.7e-129 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
NMCIJIJD_01937 8.6e-173 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
NMCIJIJD_01938 3.9e-248 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
NMCIJIJD_01939 2.9e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
NMCIJIJD_01940 1.3e-143 K LysR substrate binding domain
NMCIJIJD_01941 5.6e-53 azlD S branched-chain amino acid
NMCIJIJD_01942 6.9e-143 azlC E AzlC protein
NMCIJIJD_01943 1e-204 hpk31 2.7.13.3 T Histidine kinase
NMCIJIJD_01944 3.8e-125 K response regulator
NMCIJIJD_01945 4.1e-209 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
NMCIJIJD_01946 1.1e-172 deoR K sugar-binding domain protein
NMCIJIJD_01947 1.1e-130 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
NMCIJIJD_01948 9.6e-239 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
NMCIJIJD_01949 1.1e-236 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
NMCIJIJD_01950 3.4e-118 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
NMCIJIJD_01951 1.1e-136 XK27_01040 S Protein of unknown function (DUF1129)
NMCIJIJD_01952 8.8e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
NMCIJIJD_01953 5.4e-32 yyzM S Bacterial protein of unknown function (DUF951)
NMCIJIJD_01954 3.4e-155 spo0J K Belongs to the ParB family
NMCIJIJD_01955 4.7e-140 soj D Sporulation initiation inhibitor
NMCIJIJD_01956 1e-152 noc K Belongs to the ParB family
NMCIJIJD_01957 4.1e-130 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
NMCIJIJD_01958 3.1e-164 fadB4 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
NMCIJIJD_01959 3.5e-171 rihC 3.2.2.1 F Nucleoside
NMCIJIJD_01960 1e-218 nupG F Nucleoside transporter
NMCIJIJD_01961 2.2e-222 cycA E Amino acid permease
NMCIJIJD_01962 1.4e-138 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
NMCIJIJD_01963 1.8e-265 glnP P ABC transporter
NMCIJIJD_01964 3.8e-251 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
NMCIJIJD_01965 3.3e-232 infB UW LPXTG-motif cell wall anchor domain protein
NMCIJIJD_01966 1.2e-67 ywiB S Domain of unknown function (DUF1934)
NMCIJIJD_01967 8.7e-51 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
NMCIJIJD_01968 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
NMCIJIJD_01969 1.4e-237 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NMCIJIJD_01970 4.6e-41 rpmE2 J Ribosomal protein L31
NMCIJIJD_01971 2.5e-242 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
NMCIJIJD_01972 8e-168 S Alpha/beta hydrolase of unknown function (DUF915)
NMCIJIJD_01973 3.9e-125 srtA 3.4.22.70 M sortase family
NMCIJIJD_01974 2.8e-140 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
NMCIJIJD_01975 1.2e-163 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
NMCIJIJD_01976 4.1e-121 pgm3 G Belongs to the phosphoglycerate mutase family
NMCIJIJD_01977 4.7e-87 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NMCIJIJD_01978 7e-93 lemA S LemA family
NMCIJIJD_01979 3.1e-159 htpX O Belongs to the peptidase M48B family
NMCIJIJD_01980 3.6e-260 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
NMCIJIJD_01981 1.4e-249 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
NMCIJIJD_01982 4e-20 sprD D Domain of Unknown Function (DUF1542)
NMCIJIJD_01983 1.1e-74 S 3-demethylubiquinone-9 3-methyltransferase
NMCIJIJD_01984 9.9e-85 nrdI F Belongs to the NrdI family
NMCIJIJD_01985 1.1e-242 yhdP S Transporter associated domain
NMCIJIJD_01986 4e-156 ypdB V (ABC) transporter
NMCIJIJD_01987 2.5e-92 GM epimerase
NMCIJIJD_01988 3.6e-91 M1-874 K Domain of unknown function (DUF1836)
NMCIJIJD_01989 2.3e-78 yybA 2.3.1.57 K Transcriptional regulator
NMCIJIJD_01990 5.5e-135 XK27_07210 6.1.1.6 S B3 4 domain
NMCIJIJD_01991 9e-161 S AI-2E family transporter
NMCIJIJD_01992 1.7e-164 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
NMCIJIJD_01993 6.9e-167
NMCIJIJD_01994 5.4e-135 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
NMCIJIJD_01995 1.3e-190 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NMCIJIJD_01996 4.7e-92 S Domain of unknown function (DUF4767)
NMCIJIJD_01997 4.3e-13
NMCIJIJD_01998 1.1e-212 cytX U Belongs to the purine-cytosine permease (2.A.39) family
NMCIJIJD_01999 6.6e-98 wecD3 K PFAM GCN5-related N-acetyltransferase
NMCIJIJD_02000 4.4e-169 P CorA-like Mg2+ transporter protein
NMCIJIJD_02001 1.2e-79
NMCIJIJD_02002 1.3e-116 M Lysin motif
NMCIJIJD_02003 5.5e-201 EGP Major facilitator Superfamily
NMCIJIJD_02004 1e-37 D Antitoxin component of a toxin-antitoxin (TA) module
NMCIJIJD_02005 9.8e-55 S ParE toxin of type II toxin-antitoxin system, parDE
NMCIJIJD_02006 3.4e-103 ywlG S Belongs to the UPF0340 family
NMCIJIJD_02007 5.2e-239 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
NMCIJIJD_02008 1.8e-138 pnuC H nicotinamide mononucleotide transporter
NMCIJIJD_02009 5.6e-135 udp 2.4.2.1, 2.4.2.3 F Phosphorylase superfamily
NMCIJIJD_02010 7.2e-33 crp_2 K Cyclic nucleotide-binding domain
NMCIJIJD_02011 1.7e-187 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
NMCIJIJD_02012 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
NMCIJIJD_02014 8.6e-86 ydcK S Belongs to the SprT family
NMCIJIJD_02015 0.0 yhgF K Tex-like protein N-terminal domain protein
NMCIJIJD_02016 4.7e-154 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
NMCIJIJD_02017 2.4e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
NMCIJIJD_02018 1.8e-127 gntR1 K UbiC transcription regulator-associated domain protein
NMCIJIJD_02019 1.4e-133 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
NMCIJIJD_02020 3.9e-301 aspT P Predicted Permease Membrane Region
NMCIJIJD_02021 2.5e-253 EGP Major facilitator Superfamily
NMCIJIJD_02023 8e-60 S VRR_NUC
NMCIJIJD_02025 1.5e-236 S Virulence-associated protein E
NMCIJIJD_02026 3.3e-149 S Bifunctional DNA primase/polymerase, N-terminal
NMCIJIJD_02027 1.7e-93
NMCIJIJD_02028 1.9e-141 L AAA domain
NMCIJIJD_02029 2.9e-262 res L Helicase C-terminal domain protein
NMCIJIJD_02030 1.9e-83 S Siphovirus Gp157
NMCIJIJD_02032 8.4e-31
NMCIJIJD_02034 3.8e-59
NMCIJIJD_02036 1.1e-144 K ORF6N domain
NMCIJIJD_02037 1.8e-30 K Helix-turn-helix XRE-family like proteins
NMCIJIJD_02038 2.7e-58 K Transcriptional regulator, Cro CI family
NMCIJIJD_02040 7.1e-72
NMCIJIJD_02041 1.4e-121 S Domain of unknown function (DUF5067)
NMCIJIJD_02042 1e-212 L Belongs to the 'phage' integrase family
NMCIJIJD_02050 7.3e-211 gldA 1.1.1.6 C dehydrogenase
NMCIJIJD_02051 6.1e-125 S Alpha beta hydrolase
NMCIJIJD_02052 1.4e-220 dacA 3.4.16.4 M Belongs to the peptidase S11 family
NMCIJIJD_02053 5.9e-103
NMCIJIJD_02055 1.4e-124 yciB M ErfK YbiS YcfS YnhG
NMCIJIJD_02056 2.3e-267 S Putative peptidoglycan binding domain
NMCIJIJD_02057 9.9e-112 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
NMCIJIJD_02058 3.1e-89
NMCIJIJD_02059 5.2e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
NMCIJIJD_02060 1.1e-217 yttB EGP Major facilitator Superfamily
NMCIJIJD_02061 5.3e-110
NMCIJIJD_02062 1e-24
NMCIJIJD_02063 1.1e-175 scrR K Transcriptional regulator, LacI family
NMCIJIJD_02064 1.4e-245 acm2 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
NMCIJIJD_02065 4.1e-50 czrA K Transcriptional regulator, ArsR family
NMCIJIJD_02066 7.1e-39
NMCIJIJD_02067 7.6e-160 ytbE 1.1.1.346 S Aldo keto reductase
NMCIJIJD_02068 2.7e-134 K response regulator
NMCIJIJD_02069 3.9e-184 T PhoQ Sensor
NMCIJIJD_02070 1.5e-135 macB2 V ABC transporter, ATP-binding protein
NMCIJIJD_02071 0.0 ysaB V FtsX-like permease family
NMCIJIJD_02072 2.5e-160 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
NMCIJIJD_02073 4e-170 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
NMCIJIJD_02074 3.8e-287 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NMCIJIJD_02075 1.1e-198 EGP Major facilitator Superfamily
NMCIJIJD_02076 1.8e-92 ymdB S Macro domain protein
NMCIJIJD_02077 2.1e-114 K Helix-turn-helix domain
NMCIJIJD_02078 0.0 pepO 3.4.24.71 O Peptidase family M13
NMCIJIJD_02079 3.6e-48
NMCIJIJD_02080 3.6e-246 S Putative metallopeptidase domain
NMCIJIJD_02081 2.4e-209 3.1.3.1 S associated with various cellular activities
NMCIJIJD_02082 2.3e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
NMCIJIJD_02083 5.3e-65 yeaO S Protein of unknown function, DUF488
NMCIJIJD_02085 1.4e-124 yrkL S Flavodoxin-like fold
NMCIJIJD_02086 9.5e-55
NMCIJIJD_02087 3.5e-20 S Domain of unknown function (DUF4767)
NMCIJIJD_02088 2.7e-140 2.1.1.72 D peptidase
NMCIJIJD_02089 6.3e-50
NMCIJIJD_02090 2.8e-207 nrnB S DHHA1 domain
NMCIJIJD_02091 1.2e-233 S Uncharacterized protein conserved in bacteria (DUF2325)
NMCIJIJD_02092 1.7e-249 brnQ U Component of the transport system for branched-chain amino acids
NMCIJIJD_02093 6.8e-107 NU mannosyl-glycoprotein
NMCIJIJD_02094 4e-147 S Putative ABC-transporter type IV
NMCIJIJD_02095 2.9e-274 S ABC transporter, ATP-binding protein
NMCIJIJD_02096 3.2e-107 K Helix-turn-helix domain
NMCIJIJD_02097 3.9e-50
NMCIJIJD_02098 2.5e-33 WQ51_00220 K Helix-turn-helix domain
NMCIJIJD_02099 2.2e-108 S Protein of unknown function (DUF3278)
NMCIJIJD_02101 6.3e-76 M PFAM NLP P60 protein
NMCIJIJD_02102 1e-190 ABC-SBP S ABC transporter
NMCIJIJD_02103 1.1e-153 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
NMCIJIJD_02104 3.7e-137 XK27_08845 S ABC transporter, ATP-binding protein
NMCIJIJD_02105 8.8e-96 P Cadmium resistance transporter
NMCIJIJD_02106 2.4e-56 K Transcriptional regulator, ArsR family
NMCIJIJD_02107 2e-239 mepA V MATE efflux family protein
NMCIJIJD_02108 1.1e-55 trxA O Belongs to the thioredoxin family
NMCIJIJD_02109 2.3e-131 terC P membrane
NMCIJIJD_02110 7.4e-177 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
NMCIJIJD_02111 9.7e-169 corA P CorA-like Mg2+ transporter protein
NMCIJIJD_02112 2e-285 pipD E Dipeptidase
NMCIJIJD_02113 1.1e-242 pbuX F xanthine permease
NMCIJIJD_02114 5.7e-253 nhaC C Na H antiporter NhaC
NMCIJIJD_02115 5.6e-286 S C4-dicarboxylate anaerobic carrier
NMCIJIJD_02116 8.5e-127 pgm3 G phosphoglycerate mutase family
NMCIJIJD_02117 1.3e-41
NMCIJIJD_02118 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
NMCIJIJD_02126 4.4e-17 K Transcriptional regulator, HxlR family
NMCIJIJD_02127 2.8e-193
NMCIJIJD_02128 1.5e-97 2.3.1.128 K acetyltransferase
NMCIJIJD_02131 2.3e-76 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
NMCIJIJD_02132 1.6e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
NMCIJIJD_02133 1.4e-121 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
NMCIJIJD_02134 5.5e-205 coiA 3.6.4.12 S Competence protein
NMCIJIJD_02135 1.1e-269 pipD E Dipeptidase
NMCIJIJD_02136 5.1e-116 yjbH Q Thioredoxin
NMCIJIJD_02137 2.3e-116 yjbM 2.7.6.5 S RelA SpoT domain protein
NMCIJIJD_02138 2.7e-154 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
NMCIJIJD_02139 2.1e-176 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
NMCIJIJD_02140 1.7e-44 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
NMCIJIJD_02141 2.3e-104 ypsA S Belongs to the UPF0398 family
NMCIJIJD_02142 1.2e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
NMCIJIJD_02143 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
NMCIJIJD_02144 1.8e-162 EG EamA-like transporter family
NMCIJIJD_02145 3e-125 dnaD L DnaD domain protein
NMCIJIJD_02146 4e-87 ypmB S Protein conserved in bacteria
NMCIJIJD_02147 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
NMCIJIJD_02148 2.1e-174 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
NMCIJIJD_02149 8.1e-174 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
NMCIJIJD_02150 4.2e-214 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
NMCIJIJD_02151 3.4e-194 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
NMCIJIJD_02152 4.9e-87 S Protein of unknown function (DUF1440)
NMCIJIJD_02153 0.0 rafA 3.2.1.22 G alpha-galactosidase
NMCIJIJD_02154 2e-55 K purine nucleotide biosynthetic process
NMCIJIJD_02155 2.1e-103 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
NMCIJIJD_02157 1.2e-126 GT2,GT4 M Glycosyltransferase GT-D fold
NMCIJIJD_02158 1.3e-144 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G MucBP domain
NMCIJIJD_02159 9.8e-101 S Pfam:DUF3816
NMCIJIJD_02160 0.0 clpE O Belongs to the ClpA ClpB family
NMCIJIJD_02161 2.2e-27
NMCIJIJD_02162 2.7e-39 ptsH G phosphocarrier protein HPR
NMCIJIJD_02163 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NMCIJIJD_02164 4.5e-230 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
NMCIJIJD_02165 2e-199 cpoA GT4 M Glycosyltransferase, group 1 family protein
NMCIJIJD_02166 1.3e-179 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
NMCIJIJD_02167 1.5e-39 ykuJ S Protein of unknown function (DUF1797)
NMCIJIJD_02168 3.4e-129 S PFAM Archaeal ATPase
NMCIJIJD_02169 4.4e-27 S PFAM Archaeal ATPase
NMCIJIJD_02170 1.1e-161 spoU 2.1.1.185 J Methyltransferase
NMCIJIJD_02171 6.6e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
NMCIJIJD_02173 1.7e-226 S cog cog1373
NMCIJIJD_02174 2.6e-177 coaA 2.7.1.33 F Pantothenic acid kinase
NMCIJIJD_02175 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
NMCIJIJD_02176 7e-161 EG EamA-like transporter family
NMCIJIJD_02177 1.5e-255 nox C NADH oxidase
NMCIJIJD_02178 3e-251 nox C NADH oxidase
NMCIJIJD_02179 0.0 helD 3.6.4.12 L DNA helicase
NMCIJIJD_02180 4.2e-118 dedA S SNARE associated Golgi protein
NMCIJIJD_02181 5e-127 G phosphoglycerate mutase
NMCIJIJD_02182 9.8e-236 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NMCIJIJD_02183 6.6e-35 S Transglycosylase associated protein
NMCIJIJD_02185 1.6e-185 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)