ORF_ID e_value Gene_name EC_number CAZy COGs Description
NCODAFGM_00001 4.5e-65 S SLAP domain
NCODAFGM_00002 8.7e-34 S SLAP domain
NCODAFGM_00003 3.3e-211 L COG3547 Transposase and inactivated derivatives
NCODAFGM_00004 1e-303 S DNA primase
NCODAFGM_00005 1.2e-42 K Helix-turn-helix XRE-family like proteins
NCODAFGM_00006 1.2e-75
NCODAFGM_00009 1.2e-244 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NCODAFGM_00010 4.2e-116
NCODAFGM_00011 2e-59 srtA 3.4.22.70 M Sortase family
NCODAFGM_00012 2.1e-293 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
NCODAFGM_00013 3.7e-187 2.7.7.7, 3.4.21.110 D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
NCODAFGM_00014 3.2e-38 Q Methyltransferase domain
NCODAFGM_00015 3e-227 stp_1 EGP Major Facilitator Superfamily
NCODAFGM_00016 2.3e-21 H ThiF family
NCODAFGM_00017 2.4e-177 K helix_turn_helix, Arsenical Resistance Operon Repressor
NCODAFGM_00018 1.8e-75 K Transcriptional regulator
NCODAFGM_00019 5.5e-77 tag 3.2.2.20 L Methyladenine glycosylase
NCODAFGM_00020 9.5e-101 tnpR L Resolvase, N terminal domain
NCODAFGM_00021 4.7e-193 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NCODAFGM_00022 2.1e-73 nrdI F NrdI Flavodoxin like
NCODAFGM_00023 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NCODAFGM_00024 1e-24 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
NCODAFGM_00025 4.6e-29
NCODAFGM_00026 6.6e-142 soj D AAA domain
NCODAFGM_00027 2.3e-129 repA S Replication initiator protein A
NCODAFGM_00028 1.1e-26
NCODAFGM_00029 1.5e-125 S Fic/DOC family
NCODAFGM_00030 3.4e-40
NCODAFGM_00031 2.8e-23
NCODAFGM_00032 0.0 traA L MobA/MobL family
NCODAFGM_00033 1.3e-12
NCODAFGM_00034 3.5e-79
NCODAFGM_00035 1.1e-48 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NCODAFGM_00036 2.4e-181 ykgC 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
NCODAFGM_00037 1.2e-40 ykgC 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
NCODAFGM_00038 4.3e-297 M Collagen binding domain
NCODAFGM_00039 4.1e-108 EGP Major facilitator Superfamily
NCODAFGM_00040 2.9e-106 ropB K Transcriptional regulator
NCODAFGM_00041 6e-209 EGP Major facilitator Superfamily
NCODAFGM_00042 3.9e-32 E Zn peptidase
NCODAFGM_00043 3.7e-63 ps115 K Helix-turn-helix XRE-family like proteins
NCODAFGM_00044 2.8e-46
NCODAFGM_00045 6.7e-80 S Bacteriocin helveticin-J
NCODAFGM_00046 5.3e-135 S SLAP domain
NCODAFGM_00047 9.7e-233 L COG3547 Transposase and inactivated derivatives
NCODAFGM_00048 1e-303 S DNA primase
NCODAFGM_00049 1.2e-42 K Helix-turn-helix XRE-family like proteins
NCODAFGM_00050 1.2e-75
NCODAFGM_00053 1.2e-244 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
NCODAFGM_00054 4.2e-116
NCODAFGM_00055 2e-59 srtA 3.4.22.70 M Sortase family
NCODAFGM_00056 2.2e-284 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
NCODAFGM_00057 3.7e-187 2.7.7.7, 3.4.21.110 D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
NCODAFGM_00058 3.2e-38 Q Methyltransferase domain
NCODAFGM_00059 1.3e-97 stp_1 EGP Major Facilitator Superfamily
NCODAFGM_00060 2.3e-21 H ThiF family
NCODAFGM_00061 2.4e-177 K helix_turn_helix, Arsenical Resistance Operon Repressor
NCODAFGM_00062 8e-56 K Transcriptional regulator
NCODAFGM_00063 5.5e-77 tag 3.2.2.20 L Methyladenine glycosylase
NCODAFGM_00064 9.5e-101 tnpR L Resolvase, N terminal domain
NCODAFGM_00065 4.7e-193 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NCODAFGM_00066 2.1e-73 nrdI F NrdI Flavodoxin like
NCODAFGM_00067 6.6e-08 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NCODAFGM_00068 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NCODAFGM_00069 6.3e-232 I Protein of unknown function (DUF2974)
NCODAFGM_00070 9.2e-119 yhiD S MgtC family
NCODAFGM_00072 6.7e-16 S SLAP domain
NCODAFGM_00074 1.1e-24 S SLAP domain
NCODAFGM_00075 8.8e-29
NCODAFGM_00078 4.9e-111 K Helix-turn-helix XRE-family like proteins
NCODAFGM_00079 1.3e-64 K Helix-turn-helix domain
NCODAFGM_00081 1.6e-54 S CAAX protease self-immunity
NCODAFGM_00082 2.9e-25 WQ51_00220 K Helix-turn-helix XRE-family like proteins
NCODAFGM_00084 4.4e-73 ybaT E Amino acid permease
NCODAFGM_00085 5e-07 S LPXTG cell wall anchor motif
NCODAFGM_00086 1.5e-146 S Putative ABC-transporter type IV
NCODAFGM_00087 4.4e-79 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S cob(I)alamin adenosyltransferase
NCODAFGM_00088 1.2e-16 L Helix-turn-helix domain
NCODAFGM_00090 4.1e-09 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
NCODAFGM_00091 5e-28 M domain protein
NCODAFGM_00093 1.1e-39 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
NCODAFGM_00094 0.0 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
NCODAFGM_00095 2.2e-65 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
NCODAFGM_00096 1.3e-242 oppA E ABC transporter substrate-binding protein
NCODAFGM_00097 1.3e-58 oppA E ABC transporter substrate-binding protein
NCODAFGM_00098 6.4e-177 K AI-2E family transporter
NCODAFGM_00099 2.6e-103 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
NCODAFGM_00100 4.1e-18
NCODAFGM_00101 5.2e-248 G Major Facilitator
NCODAFGM_00102 5.3e-136 XK27_08845 S ABC transporter, ATP-binding protein
NCODAFGM_00103 1.6e-120 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
NCODAFGM_00104 4.4e-175 ABC-SBP S ABC transporter
NCODAFGM_00105 6.2e-288 V ABC-type multidrug transport system, ATPase and permease components
NCODAFGM_00106 3.4e-149 ropB K Helix-turn-helix domain
NCODAFGM_00107 3.9e-133 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
NCODAFGM_00108 1.1e-156 P CorA-like Mg2+ transporter protein
NCODAFGM_00109 9.1e-161 yvgN C Aldo keto reductase
NCODAFGM_00110 0.0 tetP J elongation factor G
NCODAFGM_00111 1.5e-149 3.1.3.102, 3.1.3.104 S haloacid dehalogenase-like hydrolase
NCODAFGM_00112 7.6e-134 EGP Major facilitator Superfamily
NCODAFGM_00113 4e-192 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NCODAFGM_00115 5.3e-158 xth 3.1.11.2 L exodeoxyribonuclease III
NCODAFGM_00116 1.3e-273 E amino acid
NCODAFGM_00117 0.0 L Helicase C-terminal domain protein
NCODAFGM_00118 6.2e-205 pbpX1 V Beta-lactamase
NCODAFGM_00119 5.1e-226 N Uncharacterized conserved protein (DUF2075)
NCODAFGM_00120 1.4e-69 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
NCODAFGM_00122 3.5e-219 L Transposase
NCODAFGM_00123 1.4e-36 S Cytochrome B5
NCODAFGM_00124 8.6e-167 arbZ I Phosphate acyltransferases
NCODAFGM_00125 5.1e-147 arbY M Glycosyl transferase family 8
NCODAFGM_00126 5.7e-20 arbY M Glycosyl transferase family 8
NCODAFGM_00127 1.7e-184 arbY M Glycosyl transferase family 8
NCODAFGM_00128 1.5e-155 arbx M Glycosyl transferase family 8
NCODAFGM_00129 1.4e-149 arbV 2.3.1.51 I Acyl-transferase
NCODAFGM_00131 4.9e-34
NCODAFGM_00133 4.1e-130 K response regulator
NCODAFGM_00134 2.2e-305 vicK 2.7.13.3 T Histidine kinase
NCODAFGM_00135 3.3e-258 yycH S YycH protein
NCODAFGM_00136 2.9e-148 yycI S YycH protein
NCODAFGM_00137 4.1e-147 vicX 3.1.26.11 S domain protein
NCODAFGM_00138 3.3e-151 htrA 3.4.21.107 O serine protease
NCODAFGM_00139 1e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
NCODAFGM_00140 4.4e-163 M NlpC/P60 family
NCODAFGM_00141 8.5e-91 G Peptidase_C39 like family
NCODAFGM_00142 2.1e-176 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
NCODAFGM_00143 1.3e-77 P Cobalt transport protein
NCODAFGM_00144 4.8e-249 cbiO1 S ABC transporter, ATP-binding protein
NCODAFGM_00145 3.9e-173 K helix_turn_helix, arabinose operon control protein
NCODAFGM_00146 7.5e-158 htpX O Belongs to the peptidase M48B family
NCODAFGM_00147 1.3e-94 lemA S LemA family
NCODAFGM_00148 1.4e-193 ybiR P Citrate transporter
NCODAFGM_00149 2e-70 S Iron-sulphur cluster biosynthesis
NCODAFGM_00150 7.1e-309 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
NCODAFGM_00151 1.2e-17
NCODAFGM_00152 1.5e-99
NCODAFGM_00154 6.8e-216 ydaM M Glycosyl transferase
NCODAFGM_00155 1.4e-177 G Glycosyl hydrolases family 8
NCODAFGM_00156 7.6e-120 yfbR S HD containing hydrolase-like enzyme
NCODAFGM_00157 7.6e-160 L HNH nucleases
NCODAFGM_00158 2.1e-147 S Protein of unknown function (DUF805)
NCODAFGM_00159 1.3e-134 glnQ E ABC transporter, ATP-binding protein
NCODAFGM_00160 6.7e-290 glnP P ABC transporter permease
NCODAFGM_00161 4e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
NCODAFGM_00162 5.8e-64 yeaO S Protein of unknown function, DUF488
NCODAFGM_00163 1.8e-123 terC P Integral membrane protein TerC family
NCODAFGM_00164 7.1e-92 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
NCODAFGM_00165 3.8e-133 cobB K SIR2 family
NCODAFGM_00166 4.2e-86
NCODAFGM_00167 2.5e-283 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NCODAFGM_00168 1.6e-182 S Alpha/beta hydrolase of unknown function (DUF915)
NCODAFGM_00169 1.3e-145 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NCODAFGM_00170 2e-140 ypuA S Protein of unknown function (DUF1002)
NCODAFGM_00171 3.7e-156 epsV 2.7.8.12 S glycosyl transferase family 2
NCODAFGM_00172 8.3e-122 S Alpha/beta hydrolase family
NCODAFGM_00173 3.7e-146 K Helix-turn-helix domain
NCODAFGM_00174 1.6e-20
NCODAFGM_00175 9.7e-60
NCODAFGM_00177 8.7e-197 EGP Major Facilitator Superfamily
NCODAFGM_00178 1.4e-74 noxC 1.5.1.39 C coenzyme F420-1:gamma-L-glutamate ligase activity
NCODAFGM_00179 2.8e-138 L An automated process has identified a potential problem with this gene model
NCODAFGM_00180 6.8e-42 K Bacterial regulatory helix-turn-helix protein, lysR family
NCODAFGM_00181 2.1e-81 P Major Facilitator Superfamily
NCODAFGM_00182 2.6e-195 C FAD binding domain
NCODAFGM_00183 9.3e-103 L An automated process has identified a potential problem with this gene model
NCODAFGM_00184 2.6e-35 noxC 1.5.1.39 C coenzyme F420-1:gamma-L-glutamate ligase activity
NCODAFGM_00185 8.2e-182 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NCODAFGM_00186 8.4e-125 luxT K Bacterial regulatory proteins, tetR family
NCODAFGM_00187 2.8e-135
NCODAFGM_00188 1.3e-258 glnPH2 P ABC transporter permease
NCODAFGM_00189 3.4e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
NCODAFGM_00190 6.4e-224 S Cysteine-rich secretory protein family
NCODAFGM_00191 1.2e-205 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
NCODAFGM_00192 1.4e-112
NCODAFGM_00193 2.9e-100 yibE S overlaps another CDS with the same product name
NCODAFGM_00194 1.3e-91 yibE S overlaps another CDS with the same product name
NCODAFGM_00195 2.2e-129 yibF S overlaps another CDS with the same product name
NCODAFGM_00196 6.6e-108 I alpha/beta hydrolase fold
NCODAFGM_00197 4.3e-31 I alpha/beta hydrolase fold
NCODAFGM_00198 0.0 G Belongs to the glycosyl hydrolase 31 family
NCODAFGM_00199 2.9e-196 S Uncharacterised protein family (UPF0236)
NCODAFGM_00200 1.6e-216 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
NCODAFGM_00201 5.4e-13
NCODAFGM_00202 5.2e-08
NCODAFGM_00203 3.6e-90 ntd 2.4.2.6 F Nucleoside
NCODAFGM_00204 1.7e-87 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
NCODAFGM_00205 4.8e-148 ptp3 3.1.3.48 T Tyrosine phosphatase family
NCODAFGM_00206 1.4e-81 uspA T universal stress protein
NCODAFGM_00207 4.1e-151 phnD P Phosphonate ABC transporter
NCODAFGM_00208 4.1e-136 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
NCODAFGM_00209 2.3e-118 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
NCODAFGM_00210 2.2e-148 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
NCODAFGM_00211 3.3e-106 tag 3.2.2.20 L glycosylase
NCODAFGM_00212 3.9e-84
NCODAFGM_00213 7.6e-274 S Calcineurin-like phosphoesterase
NCODAFGM_00214 0.0 asnB 6.3.5.4 E Asparagine synthase
NCODAFGM_00215 5.6e-255 yxbA 6.3.1.12 S ATP-grasp enzyme
NCODAFGM_00216 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
NCODAFGM_00217 8.7e-141 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
NCODAFGM_00218 5.2e-102 S Iron-sulfur cluster assembly protein
NCODAFGM_00219 1.5e-230 XK27_04775 S PAS domain
NCODAFGM_00220 4.7e-211 yttB EGP Major facilitator Superfamily
NCODAFGM_00221 0.0 pepO 3.4.24.71 O Peptidase family M13
NCODAFGM_00222 1.6e-168 kup P Transport of potassium into the cell
NCODAFGM_00223 3.3e-181 kup P Transport of potassium into the cell
NCODAFGM_00224 2.1e-68
NCODAFGM_00225 1e-08
NCODAFGM_00226 5.5e-30
NCODAFGM_00227 1.1e-40 S Protein of unknown function (DUF2922)
NCODAFGM_00228 3.8e-97 S SLAP domain
NCODAFGM_00229 3.7e-19
NCODAFGM_00230 2.9e-196 S Uncharacterised protein family (UPF0236)
NCODAFGM_00231 5.5e-78 K DNA-templated transcription, initiation
NCODAFGM_00232 8.7e-26
NCODAFGM_00233 3.2e-54 3.6.4.12 S PD-(D/E)XK nuclease family transposase
NCODAFGM_00234 6.4e-207 S SLAP domain
NCODAFGM_00237 5.5e-99 cadD P Cadmium resistance transporter
NCODAFGM_00238 7.7e-42 L transposase activity
NCODAFGM_00239 1e-213 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
NCODAFGM_00240 1.6e-199 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
NCODAFGM_00241 0.0 yjbQ P TrkA C-terminal domain protein
NCODAFGM_00242 1.7e-106 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
NCODAFGM_00243 6e-161 S Oxidoreductase family, NAD-binding Rossmann fold
NCODAFGM_00244 2.1e-130
NCODAFGM_00245 2.1e-116
NCODAFGM_00246 5e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NCODAFGM_00247 1.4e-98 G Aldose 1-epimerase
NCODAFGM_00248 2.7e-194 brpA K Cell envelope-like function transcriptional attenuator common domain protein
NCODAFGM_00249 5.8e-109 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
NCODAFGM_00250 0.0 XK27_08315 M Sulfatase
NCODAFGM_00251 2e-266 S Fibronectin type III domain
NCODAFGM_00252 2.2e-243 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
NCODAFGM_00253 1.2e-53
NCODAFGM_00255 1.6e-257 pepC 3.4.22.40 E aminopeptidase
NCODAFGM_00256 1.3e-122 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
NCODAFGM_00257 2.9e-301 oppA E ABC transporter, substratebinding protein
NCODAFGM_00258 1.6e-310 oppA E ABC transporter, substratebinding protein
NCODAFGM_00259 1.7e-210 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
NCODAFGM_00260 1.1e-146 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
NCODAFGM_00261 8e-188 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
NCODAFGM_00262 2.7e-199 oppD P Belongs to the ABC transporter superfamily
NCODAFGM_00263 7.1e-175 oppF P Belongs to the ABC transporter superfamily
NCODAFGM_00264 1.4e-256 pepC 3.4.22.40 E aminopeptidase
NCODAFGM_00265 3.9e-72 hsp O Belongs to the small heat shock protein (HSP20) family
NCODAFGM_00266 2.6e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
NCODAFGM_00267 1.2e-112
NCODAFGM_00269 1.2e-111 E Belongs to the SOS response-associated peptidase family
NCODAFGM_00270 3.7e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
NCODAFGM_00271 1.8e-89 comEB 3.5.4.12 F MafB19-like deaminase
NCODAFGM_00272 2e-103 S TPM domain
NCODAFGM_00273 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
NCODAFGM_00274 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
NCODAFGM_00275 1e-147 tatD L hydrolase, TatD family
NCODAFGM_00276 1e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
NCODAFGM_00277 2.6e-150 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
NCODAFGM_00278 4.5e-39 veg S Biofilm formation stimulator VEG
NCODAFGM_00279 2.3e-145 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
NCODAFGM_00280 5.1e-206 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
NCODAFGM_00281 5.3e-80
NCODAFGM_00282 0.0 S SLAP domain
NCODAFGM_00283 6.7e-176 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
NCODAFGM_00284 6.8e-154 2.7.1.2 GK ROK family
NCODAFGM_00285 5.6e-37
NCODAFGM_00286 3.9e-267 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
NCODAFGM_00287 6.9e-69 S Domain of unknown function (DUF1934)
NCODAFGM_00288 1.7e-46 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
NCODAFGM_00289 6.7e-311 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
NCODAFGM_00290 9.6e-247 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
NCODAFGM_00291 2.6e-78 K acetyltransferase
NCODAFGM_00292 8.6e-47 adk 2.7.4.3 F AAA domain
NCODAFGM_00293 6.3e-284 pipD E Dipeptidase
NCODAFGM_00294 1.9e-155 msmR K AraC-like ligand binding domain
NCODAFGM_00295 4.4e-228 pbuX F xanthine permease
NCODAFGM_00296 1.2e-103 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
NCODAFGM_00297 4.2e-30 K Helix-turn-helix
NCODAFGM_00298 1.6e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
NCODAFGM_00299 7.8e-51 arsR K helix_turn_helix, Arsenical Resistance Operon Repressor
NCODAFGM_00300 4.9e-185 arsB 1.20.4.1 P Sodium Bile acid symporter family
NCODAFGM_00301 2.7e-67 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NCODAFGM_00303 1.5e-19
NCODAFGM_00305 2.7e-19 D Ftsk spoiiie family protein
NCODAFGM_00306 7.5e-15 D Ftsk spoiiie family protein
NCODAFGM_00307 5.9e-30 S Replication initiation factor
NCODAFGM_00308 2.3e-30 S Domain of unknown function (DUF3173)
NCODAFGM_00309 2e-172 L Belongs to the 'phage' integrase family
NCODAFGM_00310 1.2e-129 L Transposase
NCODAFGM_00311 3.6e-88 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
NCODAFGM_00312 3.1e-46 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
NCODAFGM_00313 2.9e-97 D FIVAR domain
NCODAFGM_00315 1.2e-78 2.5.1.74 H UbiA prenyltransferase family
NCODAFGM_00316 8.9e-95
NCODAFGM_00318 1.2e-219 L Transposase
NCODAFGM_00319 1.4e-142 yfeO P Voltage gated chloride channel
NCODAFGM_00320 1.8e-184 5.3.3.2 C FMN-dependent dehydrogenase
NCODAFGM_00321 3.1e-51
NCODAFGM_00322 2.1e-42
NCODAFGM_00323 7.5e-233 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
NCODAFGM_00324 3e-298 ybeC E amino acid
NCODAFGM_00325 2.2e-156 S Sucrose-6F-phosphate phosphohydrolase
NCODAFGM_00326 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
NCODAFGM_00327 2.5e-39 rpmE2 J Ribosomal protein L31
NCODAFGM_00328 1.3e-262 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
NCODAFGM_00329 6.9e-249 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
NCODAFGM_00330 1.7e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
NCODAFGM_00331 1e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
NCODAFGM_00332 3.4e-129 S (CBS) domain
NCODAFGM_00333 4e-181 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
NCODAFGM_00334 5.1e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
NCODAFGM_00335 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
NCODAFGM_00336 1.6e-33 yabO J S4 domain protein
NCODAFGM_00337 6.8e-60 divIC D Septum formation initiator
NCODAFGM_00338 2.4e-62 yabR J S1 RNA binding domain
NCODAFGM_00339 1.5e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
NCODAFGM_00340 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
NCODAFGM_00341 2.8e-165 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
NCODAFGM_00342 6.7e-195 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
NCODAFGM_00343 2.7e-296 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
NCODAFGM_00344 3.4e-82 K FR47-like protein
NCODAFGM_00345 1.6e-08
NCODAFGM_00347 1.6e-08
NCODAFGM_00349 1.3e-81 yebR 1.8.4.14 T GAF domain-containing protein
NCODAFGM_00350 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
NCODAFGM_00351 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NCODAFGM_00352 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NCODAFGM_00353 6.2e-120 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
NCODAFGM_00354 7.8e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
NCODAFGM_00355 2.7e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
NCODAFGM_00356 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
NCODAFGM_00357 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
NCODAFGM_00358 9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
NCODAFGM_00359 2.1e-106 rplD J Forms part of the polypeptide exit tunnel
NCODAFGM_00360 3.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
NCODAFGM_00361 7.3e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
NCODAFGM_00362 1.1e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
NCODAFGM_00363 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
NCODAFGM_00364 2.7e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
NCODAFGM_00365 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
NCODAFGM_00366 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
NCODAFGM_00367 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
NCODAFGM_00368 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
NCODAFGM_00369 3.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
NCODAFGM_00370 5.5e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
NCODAFGM_00371 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NCODAFGM_00372 3.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
NCODAFGM_00373 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
NCODAFGM_00374 3.6e-55 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
NCODAFGM_00375 4.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
NCODAFGM_00376 2.3e-24 rpmD J Ribosomal protein L30
NCODAFGM_00377 2.6e-71 rplO J Binds to the 23S rRNA
NCODAFGM_00378 1.4e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
NCODAFGM_00379 3.5e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
NCODAFGM_00380 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
NCODAFGM_00381 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
NCODAFGM_00382 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
NCODAFGM_00383 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
NCODAFGM_00384 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
NCODAFGM_00385 1.4e-60 rplQ J Ribosomal protein L17
NCODAFGM_00386 4.1e-153 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
NCODAFGM_00387 7.8e-157 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
NCODAFGM_00388 2.6e-138 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
NCODAFGM_00389 7.8e-151 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
NCODAFGM_00390 5.9e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
NCODAFGM_00391 1e-66 rpsI J Belongs to the universal ribosomal protein uS9 family
NCODAFGM_00392 3.9e-146 M Belongs to the glycosyl hydrolase 28 family
NCODAFGM_00393 7e-80 K Acetyltransferase (GNAT) domain
NCODAFGM_00394 6.7e-107 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
NCODAFGM_00395 5.1e-119 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
NCODAFGM_00396 1.4e-133 S membrane transporter protein
NCODAFGM_00397 2.2e-125 gpmB G Belongs to the phosphoglycerate mutase family
NCODAFGM_00398 1.2e-160 czcD P cation diffusion facilitator family transporter
NCODAFGM_00399 1.4e-23
NCODAFGM_00400 1.2e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
NCODAFGM_00401 5.5e-183 S AAA domain
NCODAFGM_00402 9.6e-44
NCODAFGM_00403 7.9e-268 pepC 3.4.22.40 E Peptidase C1-like family
NCODAFGM_00404 6.4e-53
NCODAFGM_00405 1.8e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
NCODAFGM_00406 2.7e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
NCODAFGM_00407 1.6e-290 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
NCODAFGM_00408 7.5e-277 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
NCODAFGM_00409 5.7e-74 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
NCODAFGM_00410 1.4e-20 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NCODAFGM_00411 7.5e-106 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NCODAFGM_00412 1.2e-94 sigH K Belongs to the sigma-70 factor family
NCODAFGM_00413 1.7e-34
NCODAFGM_00414 7.6e-288 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
NCODAFGM_00415 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
NCODAFGM_00416 3.6e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
NCODAFGM_00417 3.1e-101 nusG K Participates in transcription elongation, termination and antitermination
NCODAFGM_00418 1.2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
NCODAFGM_00419 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
NCODAFGM_00420 8.9e-156 pstS P Phosphate
NCODAFGM_00421 3.9e-163 pstC P probably responsible for the translocation of the substrate across the membrane
NCODAFGM_00422 1.2e-155 pstA P Phosphate transport system permease protein PstA
NCODAFGM_00423 5e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
NCODAFGM_00424 7.8e-140 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
NCODAFGM_00425 2.2e-117 phoU P Plays a role in the regulation of phosphate uptake
NCODAFGM_00426 1.2e-88 L An automated process has identified a potential problem with this gene model
NCODAFGM_00427 5.6e-13 GT2,GT4 M family 8
NCODAFGM_00428 7e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
NCODAFGM_00429 1.8e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
NCODAFGM_00430 6e-141 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
NCODAFGM_00431 2.9e-116 rsmC 2.1.1.172 J Methyltransferase
NCODAFGM_00432 5.9e-25
NCODAFGM_00433 2.2e-90 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
NCODAFGM_00434 7.5e-311 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
NCODAFGM_00435 2.2e-105 2.4.1.58 GT8 M family 8
NCODAFGM_00436 6e-35 M lipopolysaccharide 3-alpha-galactosyltransferase activity
NCODAFGM_00437 8.2e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
NCODAFGM_00438 1.6e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
NCODAFGM_00439 1.1e-34 S Protein of unknown function (DUF2508)
NCODAFGM_00440 1.6e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
NCODAFGM_00441 8.9e-53 yaaQ S Cyclic-di-AMP receptor
NCODAFGM_00442 2.6e-155 holB 2.7.7.7 L DNA polymerase III
NCODAFGM_00443 1.8e-59 yabA L Involved in initiation control of chromosome replication
NCODAFGM_00444 7.9e-157 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
NCODAFGM_00445 3.4e-140 fat 3.1.2.21 I Acyl-ACP thioesterase
NCODAFGM_00446 2.4e-87 S ECF transporter, substrate-specific component
NCODAFGM_00447 8.1e-134 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
NCODAFGM_00448 7.4e-97 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
NCODAFGM_00449 6.9e-195 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
NCODAFGM_00450 2.4e-50 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
NCODAFGM_00451 5.5e-206 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
NCODAFGM_00452 1.1e-224 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
NCODAFGM_00453 0.0 uup S ABC transporter, ATP-binding protein
NCODAFGM_00454 5.8e-112 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
NCODAFGM_00455 1.1e-183 scrR K helix_turn _helix lactose operon repressor
NCODAFGM_00456 1.1e-294 scrB 3.2.1.26 GH32 G invertase
NCODAFGM_00457 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
NCODAFGM_00458 2.3e-181 M CHAP domain
NCODAFGM_00459 3.5e-75
NCODAFGM_00460 1.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
NCODAFGM_00461 2.6e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
NCODAFGM_00462 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
NCODAFGM_00463 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
NCODAFGM_00464 1.7e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
NCODAFGM_00465 3.3e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
NCODAFGM_00466 1.2e-40 yajC U Preprotein translocase
NCODAFGM_00467 9.6e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
NCODAFGM_00468 5.9e-216 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
NCODAFGM_00469 5.2e-181 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
NCODAFGM_00470 4.7e-228 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
NCODAFGM_00471 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
NCODAFGM_00472 2e-42 yrzL S Belongs to the UPF0297 family
NCODAFGM_00473 6.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
NCODAFGM_00474 1.1e-50 yrzB S Belongs to the UPF0473 family
NCODAFGM_00475 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
NCODAFGM_00476 3.5e-54 trxA O Belongs to the thioredoxin family
NCODAFGM_00477 9.7e-59 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
NCODAFGM_00478 1.1e-71 yslB S Protein of unknown function (DUF2507)
NCODAFGM_00479 6.6e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
NCODAFGM_00480 6.7e-113 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
NCODAFGM_00481 1.3e-39 ropB K Helix-turn-helix domain
NCODAFGM_00482 2.7e-112
NCODAFGM_00483 1.7e-139
NCODAFGM_00484 6.9e-100 V ATPases associated with a variety of cellular activities
NCODAFGM_00485 2.4e-145 ykuT M mechanosensitive ion channel
NCODAFGM_00486 9.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
NCODAFGM_00487 5.1e-36
NCODAFGM_00488 1.7e-212 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
NCODAFGM_00489 3.2e-181 ccpA K catabolite control protein A
NCODAFGM_00490 5.2e-267 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
NCODAFGM_00491 4.3e-55
NCODAFGM_00492 2.6e-274 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
NCODAFGM_00493 1.7e-105 yutD S Protein of unknown function (DUF1027)
NCODAFGM_00494 4.1e-144 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
NCODAFGM_00495 4.2e-46 S Protein of unknown function (DUF1461)
NCODAFGM_00496 1.2e-32 S Protein of unknown function (DUF1461)
NCODAFGM_00497 2.3e-116 dedA S SNARE-like domain protein
NCODAFGM_00498 8.8e-184 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
NCODAFGM_00528 1.8e-223 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
NCODAFGM_00529 2.6e-202 cpoA GT4 M Glycosyltransferase, group 1 family protein
NCODAFGM_00530 5.7e-178 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
NCODAFGM_00531 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
NCODAFGM_00532 1.7e-29 secG U Preprotein translocase
NCODAFGM_00533 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
NCODAFGM_00534 1.1e-77 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
NCODAFGM_00535 2.9e-196 S Uncharacterised protein family (UPF0236)
NCODAFGM_00540 1.8e-164 psaA P Belongs to the bacterial solute-binding protein 9 family
NCODAFGM_00543 2.7e-219 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
NCODAFGM_00544 7.2e-259 qacA EGP Major facilitator Superfamily
NCODAFGM_00545 0.0 sacX 2.7.1.208, 2.7.1.211 G phosphotransferase system
NCODAFGM_00546 9.8e-202 L Transposase and inactivated derivatives, IS30 family
NCODAFGM_00547 7.8e-155 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
NCODAFGM_00548 5.2e-195 S Bacterial protein of unknown function (DUF871)
NCODAFGM_00549 4.5e-144 ybbH_2 K rpiR family
NCODAFGM_00550 1.1e-272 cydA 1.10.3.14 C ubiquinol oxidase
NCODAFGM_00551 6.3e-177 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
NCODAFGM_00552 3.2e-148 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
NCODAFGM_00553 9.5e-155 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
NCODAFGM_00554 2.1e-268 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
NCODAFGM_00555 2.2e-128 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
NCODAFGM_00556 3.6e-177 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
NCODAFGM_00557 6.2e-160 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
NCODAFGM_00558 1.5e-26 ndh 1.6.99.3 C NADH dehydrogenase
NCODAFGM_00559 1.6e-43 1.3.5.4 C FAD binding domain
NCODAFGM_00560 1.6e-85 3.6.4.12 S PD-(D/E)XK nuclease family transposase
NCODAFGM_00561 2.6e-169 K LysR substrate binding domain
NCODAFGM_00562 4.2e-121 3.6.1.27 I Acid phosphatase homologues
NCODAFGM_00563 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
NCODAFGM_00564 6.8e-298 ytgP S Polysaccharide biosynthesis protein
NCODAFGM_00565 3.6e-46 pspC KT PspC domain
NCODAFGM_00567 3.1e-237 dacA 3.4.16.4 M Belongs to the peptidase S11 family
NCODAFGM_00568 2.1e-154 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
NCODAFGM_00569 7.9e-99 M ErfK YbiS YcfS YnhG
NCODAFGM_00570 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
NCODAFGM_00571 2.3e-170 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
NCODAFGM_00572 2.7e-94 3.6.1.55 L NUDIX domain
NCODAFGM_00573 2.2e-220 I transferase activity, transferring acyl groups other than amino-acyl groups
NCODAFGM_00574 7.4e-169 L COG2826 Transposase and inactivated derivatives, IS30 family
NCODAFGM_00575 2.3e-77 menA 2.5.1.74 H UbiA prenyltransferase family
NCODAFGM_00577 3.7e-33
NCODAFGM_00578 3.5e-219 L Transposase
NCODAFGM_00579 9.8e-109 2.7.13.3 T GHKL domain
NCODAFGM_00580 1.3e-134 K LytTr DNA-binding domain
NCODAFGM_00581 2.1e-106
NCODAFGM_00583 4.7e-56 yniG EGP Major facilitator Superfamily
NCODAFGM_00584 1.7e-34 yniG EGP Major facilitator Superfamily
NCODAFGM_00585 1.1e-83 racA K Domain of unknown function (DUF1836)
NCODAFGM_00586 3.2e-150 yitS S EDD domain protein, DegV family
NCODAFGM_00587 6.4e-48
NCODAFGM_00588 3.1e-43
NCODAFGM_00589 4.6e-40 K helix_turn_helix, arabinose operon control protein
NCODAFGM_00590 1.9e-272 lacZ 3.2.1.23 G Domain of unknown function (DUF4982)
NCODAFGM_00591 1.5e-129 uhpT EGP Major Facilitator Superfamily
NCODAFGM_00592 0.0 3.2.1.40 G Bacterial alpha-L-rhamnosidase C-terminal domain
NCODAFGM_00593 2e-187 xynB 3.2.1.37, 3.2.1.55 GH43,GH51 G Belongs to the glycosyl hydrolase 43 family
NCODAFGM_00594 4.9e-114 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
NCODAFGM_00595 3.9e-244 3.2.1.21 GH3 G Fibronectin type III-like domain
NCODAFGM_00596 5.7e-181 uidA 3.2.1.31 G Belongs to the glycosyl hydrolase 2 family
NCODAFGM_00597 3.4e-71 S Alpha beta hydrolase
NCODAFGM_00598 5.7e-34 K DNA-binding transcription factor activity
NCODAFGM_00599 4.1e-88 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
NCODAFGM_00600 3.2e-80 G YdjC-like protein
NCODAFGM_00601 1.1e-222 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
NCODAFGM_00602 4.5e-24 3.6.4.12 S PD-(D/E)XK nuclease family transposase
NCODAFGM_00603 2.8e-50 3.6.4.12 S PD-(D/E)XK nuclease family transposase
NCODAFGM_00604 6.8e-209 glpK_1 2.7.1.30 G FGGY family of carbohydrate kinases, C-terminal domain
NCODAFGM_00605 9e-162 tktA 2.2.1.1 G Transketolase, pyrimidine binding domain
NCODAFGM_00606 1.7e-135 2.2.1.1 G Transketolase, thiamine diphosphate binding domain
NCODAFGM_00607 2.9e-137 purR13 K Bacterial regulatory proteins, lacI family
NCODAFGM_00608 7.8e-118 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NCODAFGM_00609 8.1e-56 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
NCODAFGM_00610 2.8e-250 rbsA 3.6.3.17 G ABC transporter
NCODAFGM_00611 1.8e-149 rbsC U Belongs to the binding-protein-dependent transport system permease family
NCODAFGM_00612 9.3e-157 rbsB G Periplasmic binding protein domain
NCODAFGM_00613 9.8e-202 L Transposase and inactivated derivatives, IS30 family
NCODAFGM_00614 1.7e-291 L Transposase
NCODAFGM_00615 1.8e-184 purR13 K Bacterial regulatory proteins, lacI family
NCODAFGM_00616 3.5e-290 G isomerase
NCODAFGM_00617 4.2e-194 G Protein of unknown function (DUF4038)
NCODAFGM_00618 2.9e-151 licT K CAT RNA binding domain
NCODAFGM_00619 0.0 2.7.1.208, 2.7.1.211 G phosphotransferase system
NCODAFGM_00620 1.2e-171 I alpha/beta hydrolase fold
NCODAFGM_00621 9.6e-146 G YdjC-like protein
NCODAFGM_00622 1.3e-125 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
NCODAFGM_00623 5e-117 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
NCODAFGM_00624 2.3e-176 rbsR K helix_turn _helix lactose operon repressor
NCODAFGM_00625 6.3e-208 uhpT EGP Major facilitator Superfamily
NCODAFGM_00626 7.5e-307 2.7.7.7 S Domain of unknown function (DUF5060)
NCODAFGM_00627 8.8e-121 nlhH_1 I acetylesterase activity
NCODAFGM_00628 0.0 3.2.1.52 G Glycosyl hydrolase family 3 N terminal domain
NCODAFGM_00629 9e-184 K helix_turn_helix, arabinose operon control protein
NCODAFGM_00630 1.4e-46 S Sugar efflux transporter for intercellular exchange
NCODAFGM_00631 3.8e-134 K Helix-turn-helix domain, rpiR family
NCODAFGM_00632 4.5e-158 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
NCODAFGM_00633 7.1e-65 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
NCODAFGM_00634 2.2e-199 I transferase activity, transferring acyl groups other than amino-acyl groups
NCODAFGM_00635 7.4e-128 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
NCODAFGM_00637 1.6e-140 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
NCODAFGM_00638 3.6e-111 G Phosphoglycerate mutase family
NCODAFGM_00639 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
NCODAFGM_00640 6.5e-151 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
NCODAFGM_00641 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
NCODAFGM_00642 7.2e-56 yheA S Belongs to the UPF0342 family
NCODAFGM_00643 2.8e-232 yhaO L Ser Thr phosphatase family protein
NCODAFGM_00644 0.0 L AAA domain
NCODAFGM_00645 1.9e-186 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
NCODAFGM_00646 2.9e-23
NCODAFGM_00647 4.8e-52 S Domain of unknown function DUF1829
NCODAFGM_00648 1.6e-266
NCODAFGM_00649 3.3e-72 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
NCODAFGM_00650 3.3e-153 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
NCODAFGM_00651 3.9e-25
NCODAFGM_00652 9.1e-77 hit FG Scavenger mRNA decapping enzyme C-term binding
NCODAFGM_00653 1.1e-133 ecsA V ABC transporter, ATP-binding protein
NCODAFGM_00654 1.1e-220 ecsB U ABC transporter
NCODAFGM_00655 3.3e-126 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
NCODAFGM_00657 2.8e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
NCODAFGM_00658 1.7e-122 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
NCODAFGM_00659 2.7e-188
NCODAFGM_00660 2.7e-249 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
NCODAFGM_00662 2.9e-79 mepA V MATE efflux family protein
NCODAFGM_00663 5.7e-139 mepA V MATE efflux family protein
NCODAFGM_00664 2.3e-120 S SLAP domain
NCODAFGM_00665 1.1e-80 M Peptidase family M1 domain
NCODAFGM_00666 2.2e-182 M Peptidase family M1 domain
NCODAFGM_00667 1e-184 S Bacteriocin helveticin-J
NCODAFGM_00668 3.5e-219 L Transposase
NCODAFGM_00669 1.1e-19
NCODAFGM_00670 4.5e-52 L RelB antitoxin
NCODAFGM_00671 7e-140 qmcA O prohibitin homologues
NCODAFGM_00672 2.3e-309 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
NCODAFGM_00673 1.9e-78 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
NCODAFGM_00674 1.2e-219 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
NCODAFGM_00675 2.1e-134 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
NCODAFGM_00676 6.4e-38 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NCODAFGM_00677 2.3e-127 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NCODAFGM_00678 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
NCODAFGM_00679 1.5e-277 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
NCODAFGM_00680 3.3e-197 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
NCODAFGM_00681 1.9e-109 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
NCODAFGM_00682 8.1e-293 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
NCODAFGM_00683 2.1e-243 purD 6.3.4.13 F Belongs to the GARS family
NCODAFGM_00684 7.2e-17
NCODAFGM_00685 1.6e-67 wecD K acetyltransferase
NCODAFGM_00687 0.0 fruA 3.2.1.1, 3.2.1.26, 3.2.1.65, 3.2.1.80 GH13,GH32 G Beta-fructosidases (levanase invertase)
NCODAFGM_00688 8.4e-63 L Transposase
NCODAFGM_00690 2.4e-07
NCODAFGM_00691 3.2e-43
NCODAFGM_00692 7.7e-76
NCODAFGM_00693 1.5e-269 L Transposase DDE domain
NCODAFGM_00694 1.5e-23 K Transcriptional regulator, TetR family
NCODAFGM_00695 4.1e-119 tal 2.2.1.2 H Transaldolase/Fructose-6-phosphate aldolase
NCODAFGM_00696 3.3e-71 yegW K UTRA
NCODAFGM_00697 3.7e-115 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
NCODAFGM_00699 8.6e-107 G Bacterial extracellular solute-binding protein
NCODAFGM_00700 3.7e-96 baeR K helix_turn_helix, Lux Regulon
NCODAFGM_00701 5e-118 baeS F Sensor histidine kinase
NCODAFGM_00702 6.4e-94 rbsB G Periplasmic binding protein domain
NCODAFGM_00703 2.7e-63 levA G PTS system fructose IIA component
NCODAFGM_00704 2.4e-89 2.7.1.191 G PTS system sorbose subfamily IIB component
NCODAFGM_00705 2.4e-137 M PTS system sorbose-specific iic component
NCODAFGM_00706 3.5e-149 levD G PTS system mannose/fructose/sorbose family IID component
NCODAFGM_00707 3.3e-42
NCODAFGM_00708 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
NCODAFGM_00709 9.4e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
NCODAFGM_00710 3.8e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
NCODAFGM_00711 3.5e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
NCODAFGM_00712 3e-251 dnaB L Replication initiation and membrane attachment
NCODAFGM_00713 2.4e-167 dnaI L Primosomal protein DnaI
NCODAFGM_00714 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
NCODAFGM_00715 3.8e-88
NCODAFGM_00716 1.7e-67 S Domain of unknown function (DUF389)
NCODAFGM_00717 2.5e-96 S Domain of unknown function (DUF389)
NCODAFGM_00718 9.8e-202 L Transposase and inactivated derivatives, IS30 family
NCODAFGM_00719 5e-168 L COG2826 Transposase and inactivated derivatives, IS30 family
NCODAFGM_00720 9.6e-41 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
NCODAFGM_00721 9.2e-67 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
NCODAFGM_00722 1.2e-38 hxlR K HxlR-like helix-turn-helix
NCODAFGM_00723 1.6e-73 K LytTr DNA-binding domain
NCODAFGM_00724 7e-69 S Protein of unknown function (DUF3021)
NCODAFGM_00725 2.5e-140 V ABC transporter
NCODAFGM_00726 1.3e-105 S domain protein
NCODAFGM_00727 1.3e-49 yyaR K Acetyltransferase (GNAT) domain
NCODAFGM_00728 3.2e-72 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
NCODAFGM_00729 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
NCODAFGM_00730 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
NCODAFGM_00731 5.2e-152 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
NCODAFGM_00732 2.1e-200 tnpB L Putative transposase DNA-binding domain
NCODAFGM_00733 4.2e-84 yqeG S HAD phosphatase, family IIIA
NCODAFGM_00734 4.4e-200 yqeH S Ribosome biogenesis GTPase YqeH
NCODAFGM_00735 4.4e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
NCODAFGM_00736 4.3e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
NCODAFGM_00737 5.3e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
NCODAFGM_00738 1.2e-216 ylbM S Belongs to the UPF0348 family
NCODAFGM_00739 4.7e-97 yceD S Uncharacterized ACR, COG1399
NCODAFGM_00740 1.2e-126 K response regulator
NCODAFGM_00741 3.4e-278 arlS 2.7.13.3 T Histidine kinase
NCODAFGM_00742 1.6e-08
NCODAFGM_00743 4.6e-99 S CAAX protease self-immunity
NCODAFGM_00744 8e-224 S SLAP domain
NCODAFGM_00745 3.3e-83 S Aminoacyl-tRNA editing domain
NCODAFGM_00746 1.1e-162 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
NCODAFGM_00747 2.9e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
NCODAFGM_00748 2.2e-134 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
NCODAFGM_00749 4.5e-58 yodB K Transcriptional regulator, HxlR family
NCODAFGM_00751 1.3e-106 papP P ABC transporter, permease protein
NCODAFGM_00752 2.6e-115 P ABC transporter permease
NCODAFGM_00753 1.5e-127 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
NCODAFGM_00754 1.6e-157 cjaA ET ABC transporter substrate-binding protein
NCODAFGM_00755 7.1e-200 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
NCODAFGM_00756 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
NCODAFGM_00757 2.4e-62 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
NCODAFGM_00758 4.3e-169 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
NCODAFGM_00759 1.6e-157 metQ1 P Belongs to the nlpA lipoprotein family
NCODAFGM_00760 1.9e-25
NCODAFGM_00761 0.0 mco Q Multicopper oxidase
NCODAFGM_00762 3.6e-151 S Sucrose-6F-phosphate phosphohydrolase
NCODAFGM_00763 0.0 oppA E ABC transporter
NCODAFGM_00764 7.3e-233 Q Imidazolonepropionase and related amidohydrolases
NCODAFGM_00765 2.7e-246 3.5.1.47 S Peptidase dimerisation domain
NCODAFGM_00766 1e-137 S Protein of unknown function (DUF3100)
NCODAFGM_00767 9.7e-83 S An automated process has identified a potential problem with this gene model
NCODAFGM_00768 4.5e-48 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NCODAFGM_00769 9.9e-106 S SLAP domain
NCODAFGM_00770 1.9e-88
NCODAFGM_00771 1.5e-08 isdH M Iron Transport-associated domain
NCODAFGM_00772 6.3e-123 M Iron Transport-associated domain
NCODAFGM_00773 1.9e-158 isdE P Periplasmic binding protein
NCODAFGM_00774 9.5e-148 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
NCODAFGM_00775 2.3e-139 fhuC 3.6.3.34 HP abc transporter atp-binding protein
NCODAFGM_00776 6.7e-44 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
NCODAFGM_00777 5.2e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
NCODAFGM_00778 0.0 S membrane
NCODAFGM_00779 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
NCODAFGM_00780 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
NCODAFGM_00781 7.1e-104 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
NCODAFGM_00782 1.2e-118 gluP 3.4.21.105 S Rhomboid family
NCODAFGM_00783 1.7e-35 yqgQ S Bacterial protein of unknown function (DUF910)
NCODAFGM_00784 5.7e-65 yqhL P Rhodanese-like protein
NCODAFGM_00785 7.8e-169 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
NCODAFGM_00786 2e-225 ynbB 4.4.1.1 P aluminum resistance
NCODAFGM_00787 7.5e-263 glnA 6.3.1.2 E glutamine synthetase
NCODAFGM_00788 3e-170
NCODAFGM_00789 6e-148
NCODAFGM_00790 1.7e-225 lmrB EGP Major facilitator Superfamily
NCODAFGM_00791 1.3e-252 E Amino acid permease
NCODAFGM_00792 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
NCODAFGM_00793 9.6e-59
NCODAFGM_00794 6.5e-259 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
NCODAFGM_00795 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
NCODAFGM_00796 3.6e-177 lacI3 K helix_turn _helix lactose operon repressor
NCODAFGM_00797 6.3e-232 malE G Bacterial extracellular solute-binding protein
NCODAFGM_00798 0.0 O Belongs to the peptidase S8 family
NCODAFGM_00799 2.2e-174 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
NCODAFGM_00800 5.5e-93 dhaL 2.7.1.121 S Dak2
NCODAFGM_00801 2.5e-54 dhaM 2.7.1.121 S PTS system fructose IIA component
NCODAFGM_00802 1.5e-121 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
NCODAFGM_00803 5.3e-189 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
NCODAFGM_00804 1e-144 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
NCODAFGM_00805 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
NCODAFGM_00806 1.1e-165 lacR K Transcriptional regulator
NCODAFGM_00807 0.0 lacS G Transporter
NCODAFGM_00808 0.0 lacZ 3.2.1.23 G -beta-galactosidase
NCODAFGM_00809 2.1e-221 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
NCODAFGM_00810 1.1e-288 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
NCODAFGM_00811 8.3e-198 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
NCODAFGM_00812 5.5e-36
NCODAFGM_00813 1.6e-158 scrR K Periplasmic binding protein domain
NCODAFGM_00814 9.3e-239 msmE G Bacterial extracellular solute-binding protein
NCODAFGM_00815 4.8e-157 msmF P Binding-protein-dependent transport system inner membrane component
NCODAFGM_00816 2.3e-153 msmG P Binding-protein-dependent transport system inner membrane component
NCODAFGM_00817 2.8e-210 msmX P Belongs to the ABC transporter superfamily
NCODAFGM_00818 0.0 rafA 3.2.1.22 G alpha-galactosidase
NCODAFGM_00819 1.6e-60 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
NCODAFGM_00820 5.2e-173 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
NCODAFGM_00821 7.8e-114 2.7.6.5 T Region found in RelA / SpoT proteins
NCODAFGM_00822 5e-106 K response regulator
NCODAFGM_00823 2.5e-215 sptS 2.7.13.3 T Histidine kinase
NCODAFGM_00824 5.1e-207 EGP Major facilitator Superfamily
NCODAFGM_00825 5e-69 O OsmC-like protein
NCODAFGM_00826 2.8e-93 S Protein of unknown function (DUF805)
NCODAFGM_00827 2.2e-78
NCODAFGM_00828 2e-92
NCODAFGM_00829 2e-180
NCODAFGM_00830 6.8e-84 S Fic/DOC family
NCODAFGM_00831 4.3e-275 yjeM E Amino Acid
NCODAFGM_00832 7.6e-222 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NCODAFGM_00833 4.4e-244 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
NCODAFGM_00834 6.9e-26 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
NCODAFGM_00835 3.1e-10 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
NCODAFGM_00836 3.1e-116 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
NCODAFGM_00837 3.3e-52 S Iron-sulfur cluster assembly protein
NCODAFGM_00838 1.1e-153 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
NCODAFGM_00839 3.4e-123 sdaAB 4.3.1.17 E Serine dehydratase beta chain
NCODAFGM_00840 5.2e-17
NCODAFGM_00841 1.3e-284 lsa S ABC transporter
NCODAFGM_00842 3.9e-38 clcA P chloride
NCODAFGM_00843 5.8e-19 clcA P chloride
NCODAFGM_00844 1.1e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
NCODAFGM_00845 1.7e-125 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
NCODAFGM_00846 6.3e-168 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
NCODAFGM_00847 3.2e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
NCODAFGM_00848 1.2e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
NCODAFGM_00849 4e-245 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
NCODAFGM_00850 2.1e-210 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
NCODAFGM_00851 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
NCODAFGM_00852 4.1e-160 lctP C L-lactate permease
NCODAFGM_00853 1e-80 lctP C L-lactate permease
NCODAFGM_00854 5.2e-148 glcU U sugar transport
NCODAFGM_00855 7.1e-46
NCODAFGM_00856 2.8e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
NCODAFGM_00857 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
NCODAFGM_00858 1.1e-36 S Alpha beta hydrolase
NCODAFGM_00859 2e-42 S Alpha beta hydrolase
NCODAFGM_00860 1.9e-37
NCODAFGM_00861 2.6e-52
NCODAFGM_00862 1.7e-148 S haloacid dehalogenase-like hydrolase
NCODAFGM_00863 2e-291 V ABC-type multidrug transport system, ATPase and permease components
NCODAFGM_00864 3.2e-276 V ABC-type multidrug transport system, ATPase and permease components
NCODAFGM_00865 1.5e-64 arsC 1.20.4.1 P Belongs to the ArsC family
NCODAFGM_00866 6.5e-178 I Carboxylesterase family
NCODAFGM_00868 8.4e-208 M Glycosyl hydrolases family 25
NCODAFGM_00869 2.1e-160 cinI S Serine hydrolase (FSH1)
NCODAFGM_00870 1.2e-300 S Predicted membrane protein (DUF2207)
NCODAFGM_00871 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
NCODAFGM_00873 5e-254 S Uncharacterized protein conserved in bacteria (DUF2325)
NCODAFGM_00874 3.7e-151 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
NCODAFGM_00875 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
NCODAFGM_00876 7.8e-48 rpmA J Belongs to the bacterial ribosomal protein bL27 family
NCODAFGM_00877 6.6e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
NCODAFGM_00878 4.9e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
NCODAFGM_00879 3.4e-71 yqhY S Asp23 family, cell envelope-related function
NCODAFGM_00880 2.1e-64 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
NCODAFGM_00881 6.7e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
NCODAFGM_00882 7.6e-194 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
NCODAFGM_00883 3.7e-35 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
NCODAFGM_00884 2.4e-161 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
NCODAFGM_00885 2.3e-153 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
NCODAFGM_00886 9.1e-306 recN L May be involved in recombinational repair of damaged DNA
NCODAFGM_00887 1.1e-77 6.3.3.2 S ASCH
NCODAFGM_00888 2.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
NCODAFGM_00889 1.1e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
NCODAFGM_00890 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
NCODAFGM_00891 1.9e-172 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
NCODAFGM_00892 6.1e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
NCODAFGM_00893 1.5e-138 stp 3.1.3.16 T phosphatase
NCODAFGM_00894 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
NCODAFGM_00895 4.1e-164 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
NCODAFGM_00896 8.5e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
NCODAFGM_00897 8.2e-125 thiN 2.7.6.2 H thiamine pyrophosphokinase
NCODAFGM_00898 4.1e-30
NCODAFGM_00899 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
NCODAFGM_00900 4e-57 asp S Asp23 family, cell envelope-related function
NCODAFGM_00901 7.6e-305 yloV S DAK2 domain fusion protein YloV
NCODAFGM_00902 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
NCODAFGM_00903 1e-179 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
NCODAFGM_00904 9.8e-36 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
NCODAFGM_00905 1.1e-192 oppD P Belongs to the ABC transporter superfamily
NCODAFGM_00906 2.5e-170 oppF P Belongs to the ABC transporter superfamily
NCODAFGM_00907 1.5e-172 oppB P ABC transporter permease
NCODAFGM_00908 2.5e-132 oppC P Binding-protein-dependent transport system inner membrane component
NCODAFGM_00909 3.3e-290 oppA E ABC transporter substrate-binding protein
NCODAFGM_00910 8.6e-307 oppA E ABC transporter substrate-binding protein
NCODAFGM_00911 1.9e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
NCODAFGM_00912 0.0 smc D Required for chromosome condensation and partitioning
NCODAFGM_00913 8.4e-163 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
NCODAFGM_00914 7.2e-288 pipD E Dipeptidase
NCODAFGM_00915 1.3e-48
NCODAFGM_00916 2e-132 cysA V ABC transporter, ATP-binding protein
NCODAFGM_00917 0.0 V FtsX-like permease family
NCODAFGM_00918 1.7e-260 yfnA E amino acid
NCODAFGM_00919 6e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
NCODAFGM_00920 5.8e-229 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
NCODAFGM_00921 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
NCODAFGM_00922 2.6e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
NCODAFGM_00923 3.2e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
NCODAFGM_00924 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
NCODAFGM_00925 1.1e-214 S SLAP domain
NCODAFGM_00926 1.6e-120 ung2 3.2.2.27 L Uracil-DNA glycosylase
NCODAFGM_00927 1.3e-145 E GDSL-like Lipase/Acylhydrolase family
NCODAFGM_00928 2e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
NCODAFGM_00929 4.4e-37 ynzC S UPF0291 protein
NCODAFGM_00930 1.9e-30 yneF S Uncharacterised protein family (UPF0154)
NCODAFGM_00931 0.0 mdlA V ABC transporter
NCODAFGM_00932 6.7e-307 mdlB V ABC transporter
NCODAFGM_00933 0.0 pepO 3.4.24.71 O Peptidase family M13
NCODAFGM_00934 5.9e-148 infB M domain protein
NCODAFGM_00935 6.7e-231 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
NCODAFGM_00936 9.2e-115 plsC 2.3.1.51 I Acyltransferase
NCODAFGM_00937 4.2e-197 yabB 2.1.1.223 L Methyltransferase small domain
NCODAFGM_00938 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
NCODAFGM_00939 1.7e-182 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
NCODAFGM_00940 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
NCODAFGM_00941 5.3e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
NCODAFGM_00942 5.4e-138 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
NCODAFGM_00943 1.5e-141 cdsA 2.7.7.41 I Belongs to the CDS family
NCODAFGM_00944 5.7e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
NCODAFGM_00945 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
NCODAFGM_00946 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
NCODAFGM_00947 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
NCODAFGM_00948 4.9e-197 nusA K Participates in both transcription termination and antitermination
NCODAFGM_00949 8.8e-47 ylxR K Protein of unknown function (DUF448)
NCODAFGM_00950 3.2e-47 rplGA J ribosomal protein
NCODAFGM_00951 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
NCODAFGM_00952 1.1e-59 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
NCODAFGM_00953 1.6e-155 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
NCODAFGM_00954 4.1e-175 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
NCODAFGM_00955 4.5e-194 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
NCODAFGM_00956 8e-68 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
NCODAFGM_00957 0.0 dnaK O Heat shock 70 kDa protein
NCODAFGM_00958 5.8e-203 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
NCODAFGM_00959 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
NCODAFGM_00960 1.5e-102 srtA 3.4.22.70 M sortase family
NCODAFGM_00961 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
NCODAFGM_00962 1.2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
NCODAFGM_00963 5.6e-43
NCODAFGM_00964 1.2e-42 L COG2963 Transposase and inactivated derivatives
NCODAFGM_00966 9.6e-202 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
NCODAFGM_00967 1.2e-210 S Bacterial protein of unknown function (DUF871)
NCODAFGM_00968 2.3e-43 ybhL S Belongs to the BI1 family
NCODAFGM_00969 0.0 mgtA 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
NCODAFGM_00970 9e-137 lysR5 K LysR substrate binding domain
NCODAFGM_00971 8.8e-234 arcA 3.5.3.6 E Arginine
NCODAFGM_00972 4.3e-66 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
NCODAFGM_00973 7.9e-107 argF 2.1.3.3, 2.7.2.2 E Belongs to the carbamate kinase family
NCODAFGM_00974 1.6e-94 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
NCODAFGM_00975 2.3e-215 S Sterol carrier protein domain
NCODAFGM_00976 1e-20
NCODAFGM_00977 5.8e-109 K LysR substrate binding domain
NCODAFGM_00978 9e-98
NCODAFGM_00979 6.6e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
NCODAFGM_00980 7.9e-95
NCODAFGM_00981 3.5e-219 L Transposase
NCODAFGM_00982 7.2e-281 V ABC-type multidrug transport system, ATPase and permease components
NCODAFGM_00983 1.1e-284 V ABC-type multidrug transport system, ATPase and permease components
NCODAFGM_00984 7.1e-74
NCODAFGM_00985 8e-22 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
NCODAFGM_00986 1.9e-50 hipB K sequence-specific DNA binding
NCODAFGM_00987 2.4e-41 S SnoaL-like domain
NCODAFGM_00988 0.0 L PLD-like domain
NCODAFGM_00989 4.8e-102 pgm3 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
NCODAFGM_00990 2.3e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
NCODAFGM_00991 1.2e-280 thrC 4.2.3.1 E Threonine synthase
NCODAFGM_00992 1.1e-220 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
NCODAFGM_00993 5.5e-158 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
NCODAFGM_00994 9.4e-118
NCODAFGM_00995 4.6e-160 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
NCODAFGM_00996 7.1e-14
NCODAFGM_00997 3.5e-219 L Transposase
NCODAFGM_00998 3.7e-49 cas6 L CRISPR associated protein Cas6
NCODAFGM_00999 4.4e-122 cst1 S CRISPR-associated protein (Cas_CXXC_CXXC)
NCODAFGM_01000 5e-101 cst2 L CRISPR-associated negative auto-regulator DevR/Csa2
NCODAFGM_01001 2.8e-70 cas5t L CRISPR-associated protein Cas5
NCODAFGM_01002 4.5e-191 cas3 L CRISPR-associated helicase cas3
NCODAFGM_01003 3.2e-49 cas4 3.1.12.1 L Domain of unknown function DUF83
NCODAFGM_01004 8.1e-129 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
NCODAFGM_01005 1.2e-29 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
NCODAFGM_01006 3.6e-105 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
NCODAFGM_01007 1.3e-116 S Peptidase family M23
NCODAFGM_01009 2.1e-23
NCODAFGM_01010 0.0 cas3 L CRISPR-associated helicase cas3
NCODAFGM_01011 0.0 casA L the current gene model (or a revised gene model) may contain a frame shift
NCODAFGM_01012 8.8e-110 casB S CRISPR-associated protein Cse2 (CRISPR_cse2)
NCODAFGM_01013 7e-198 casC L CT1975-like protein
NCODAFGM_01014 5.7e-132 casD S CRISPR-associated protein (Cas_Cas5)
NCODAFGM_01015 2.2e-122 casE S CRISPR_assoc
NCODAFGM_01016 1.3e-173 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
NCODAFGM_01017 4.4e-166 cas2 2.7.7.7 L CRISPR-associated protein (Cas_Cas2CT1978)
NCODAFGM_01018 1.2e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
NCODAFGM_01019 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
NCODAFGM_01020 3.5e-71 yqeY S YqeY-like protein
NCODAFGM_01021 3.3e-175 phoH T phosphate starvation-inducible protein PhoH
NCODAFGM_01022 2.2e-93 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
NCODAFGM_01023 2.1e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
NCODAFGM_01024 1.1e-136 recO L Involved in DNA repair and RecF pathway recombination
NCODAFGM_01025 4.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
NCODAFGM_01026 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
NCODAFGM_01027 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
NCODAFGM_01028 9.9e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
NCODAFGM_01029 8e-128 S Peptidase family M23
NCODAFGM_01030 4.8e-81 mutT 3.6.1.55 F NUDIX domain
NCODAFGM_01031 3.5e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
NCODAFGM_01032 2.9e-153 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
NCODAFGM_01033 6.4e-240 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
NCODAFGM_01034 1.4e-60 yvoA_1 K Transcriptional regulator, GntR family
NCODAFGM_01035 6.2e-123 skfE V ATPases associated with a variety of cellular activities
NCODAFGM_01036 3.5e-133
NCODAFGM_01037 1.9e-104
NCODAFGM_01038 1.7e-111
NCODAFGM_01039 4.3e-39 ybjQ S Belongs to the UPF0145 family
NCODAFGM_01040 3.8e-27
NCODAFGM_01041 8.8e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
NCODAFGM_01042 1.8e-144
NCODAFGM_01043 9.7e-167
NCODAFGM_01044 1.7e-265 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
NCODAFGM_01045 1.3e-116 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
NCODAFGM_01046 6.9e-184 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
NCODAFGM_01047 2.1e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
NCODAFGM_01048 1.4e-178 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
NCODAFGM_01049 8.2e-136 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
NCODAFGM_01050 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
NCODAFGM_01051 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
NCODAFGM_01052 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
NCODAFGM_01053 8.3e-90 ypmB S Protein conserved in bacteria
NCODAFGM_01054 1.3e-259 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
NCODAFGM_01055 3.7e-114 dnaD L DnaD domain protein
NCODAFGM_01056 2.7e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
NCODAFGM_01057 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
NCODAFGM_01058 4.5e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
NCODAFGM_01059 1e-107 ypsA S Belongs to the UPF0398 family
NCODAFGM_01060 1.1e-68 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
NCODAFGM_01061 1.6e-218 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
NCODAFGM_01062 1e-242 cpdA S Calcineurin-like phosphoesterase
NCODAFGM_01063 3.4e-79
NCODAFGM_01064 1.9e-115 rdgB 3.6.1.66, 5.1.1.3 F Ham1 family
NCODAFGM_01065 1.4e-34
NCODAFGM_01066 3.6e-63
NCODAFGM_01069 8.4e-118
NCODAFGM_01070 3.8e-104 pncA Q Isochorismatase family
NCODAFGM_01072 2e-35
NCODAFGM_01073 0.0 snf 2.7.11.1 KL domain protein
NCODAFGM_01074 7.8e-109 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
NCODAFGM_01075 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
NCODAFGM_01076 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
NCODAFGM_01077 1.9e-183 K Transcriptional regulator
NCODAFGM_01078 2.1e-171 ppaC 3.6.1.1 C inorganic pyrophosphatase
NCODAFGM_01079 1.1e-112 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
NCODAFGM_01080 4e-57 K Helix-turn-helix domain
NCODAFGM_01081 1.3e-218 L Transposase
NCODAFGM_01082 2.7e-123 yoaK S Protein of unknown function (DUF1275)
NCODAFGM_01083 2e-39 S Transglycosylase associated protein
NCODAFGM_01084 3.4e-211 M Glycosyl hydrolases family 25
NCODAFGM_01085 8e-111 XK27_00160 S Domain of unknown function (DUF5052)
NCODAFGM_01086 4.1e-67
NCODAFGM_01087 1.8e-203 xerS L Belongs to the 'phage' integrase family
NCODAFGM_01088 3.3e-304 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
NCODAFGM_01089 1.3e-159 degV S EDD domain protein, DegV family
NCODAFGM_01090 1.1e-66
NCODAFGM_01091 0.0 FbpA K Fibronectin-binding protein
NCODAFGM_01092 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
NCODAFGM_01093 6.7e-198 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
NCODAFGM_01094 4.3e-169 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
NCODAFGM_01095 1.4e-78 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
NCODAFGM_01096 8.8e-285 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
NCODAFGM_01097 4.8e-302 oppA E ABC transporter substrate-binding protein
NCODAFGM_01099 5.4e-101 3.1.4.37 S AAA domain
NCODAFGM_01100 1e-190
NCODAFGM_01101 6.3e-28
NCODAFGM_01102 6.5e-78 S HIRAN
NCODAFGM_01103 6e-56 S Sel1-like repeats.
NCODAFGM_01104 2e-78
NCODAFGM_01105 1e-30 S Domain of unknown function (DUF3841)
NCODAFGM_01106 0.0 yfjM S Protein of unknown function DUF262
NCODAFGM_01107 1.2e-46
NCODAFGM_01109 2.5e-15
NCODAFGM_01110 3.9e-71
NCODAFGM_01111 6.9e-07
NCODAFGM_01112 2.6e-12
NCODAFGM_01114 3.5e-219 L Transposase
NCODAFGM_01115 3.6e-103 S SIR2-like domain
NCODAFGM_01116 3.1e-52 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
NCODAFGM_01117 9.3e-75 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
NCODAFGM_01118 1.9e-280 hsdM 2.1.1.72 V type I restriction-modification system
NCODAFGM_01119 6.6e-218 S AAA domain, putative AbiEii toxin, Type IV TA system
NCODAFGM_01120 0.0 hsdR 3.1.21.3 L DEAD/DEAH box helicase
NCODAFGM_01121 0.0 S SLAP domain
NCODAFGM_01123 2.9e-237 XK27_01810 S Calcineurin-like phosphoesterase
NCODAFGM_01124 3.9e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
NCODAFGM_01125 2.6e-26 G Bacterial extracellular solute-binding protein
NCODAFGM_01126 8.5e-204 G Bacterial extracellular solute-binding protein
NCODAFGM_01127 9.7e-18
NCODAFGM_01128 9e-290 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
NCODAFGM_01129 1.2e-100 treR K UTRA
NCODAFGM_01130 5.2e-297 treB G phosphotransferase system
NCODAFGM_01131 2.8e-64 spxA_2 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
NCODAFGM_01132 1.2e-190 yrvN L AAA C-terminal domain
NCODAFGM_01133 2.9e-251 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
NCODAFGM_01134 4e-83 K Acetyltransferase (GNAT) domain
NCODAFGM_01135 1.7e-229 S Putative peptidoglycan binding domain
NCODAFGM_01136 2.2e-94 S ECF-type riboflavin transporter, S component
NCODAFGM_01137 2.8e-98 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
NCODAFGM_01138 9.3e-204 pbpX1 V Beta-lactamase
NCODAFGM_01139 1.4e-115 lacA 2.3.1.79 S Transferase hexapeptide repeat
NCODAFGM_01140 1.9e-80 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
NCODAFGM_01141 4.7e-114 3.6.1.27 I Acid phosphatase homologues
NCODAFGM_01142 4.1e-189 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
NCODAFGM_01143 0.0 uvrA3 L excinuclease ABC, A subunit
NCODAFGM_01144 7.6e-82 C Flavodoxin
NCODAFGM_01145 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
NCODAFGM_01146 2.3e-245 ynbB 4.4.1.1 P aluminum resistance
NCODAFGM_01147 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
NCODAFGM_01148 1.7e-284 E Amino acid permease
NCODAFGM_01149 1.6e-93 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
NCODAFGM_01150 5.9e-274 pepV 3.5.1.18 E dipeptidase PepV
NCODAFGM_01151 1.4e-115 mmuP E amino acid
NCODAFGM_01152 1.4e-12 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
NCODAFGM_01153 9.2e-65 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NCODAFGM_01154 7.9e-67 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
NCODAFGM_01155 4.3e-152 xerD L Phage integrase, N-terminal SAM-like domain
NCODAFGM_01156 7.1e-63 M LysM domain protein
NCODAFGM_01157 3.1e-62 C Aldo keto reductase
NCODAFGM_01158 4.8e-181 lacX 5.1.3.3 G Aldose 1-epimerase
NCODAFGM_01159 8.2e-236 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
NCODAFGM_01160 1.9e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
NCODAFGM_01161 8.5e-141 xerC D Phage integrase, N-terminal SAM-like domain
NCODAFGM_01162 1.4e-248 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
NCODAFGM_01163 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
NCODAFGM_01164 2.2e-151 dprA LU DNA protecting protein DprA
NCODAFGM_01165 8.3e-134 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
NCODAFGM_01166 1.6e-154 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
NCODAFGM_01167 3.2e-26 yjcE P Sodium proton antiporter
NCODAFGM_01168 4.4e-61 yjcE P Sodium proton antiporter
NCODAFGM_01169 1.5e-68 yjcE P Sodium proton antiporter
NCODAFGM_01170 3.8e-67 yjcE P NhaP-type Na H and K H
NCODAFGM_01171 7.1e-36 yozE S Belongs to the UPF0346 family
NCODAFGM_01172 5.7e-147 DegV S Uncharacterised protein, DegV family COG1307
NCODAFGM_01173 1.2e-107 hlyIII S protein, hemolysin III
NCODAFGM_01174 1.1e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
NCODAFGM_01175 4.6e-160 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
NCODAFGM_01176 2.1e-85 3.4.21.96 S SLAP domain
NCODAFGM_01177 1.7e-73 yagE E Amino acid permease
NCODAFGM_01178 2.7e-97 yagE E Amino acid permease
NCODAFGM_01179 3.7e-149 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
NCODAFGM_01180 9e-144 2.4.2.3 F Phosphorylase superfamily
NCODAFGM_01181 6e-140 2.4.2.3 F Phosphorylase superfamily
NCODAFGM_01182 3e-65 3.6.1.55 F NUDIX domain
NCODAFGM_01183 9.9e-83 S AAA domain
NCODAFGM_01184 6.5e-49 fbiB 6.3.2.12, 6.3.2.17, 6.3.2.31, 6.3.2.34 S F420-0:Gamma-glutamyl ligase
NCODAFGM_01185 7.7e-62 fbiB 6.3.2.12, 6.3.2.17, 6.3.2.31, 6.3.2.34 S F420-0:Gamma-glutamyl ligase
NCODAFGM_01186 1.8e-55 cdd 2.4.2.4, 3.5.4.5 F Cytidine and deoxycytidylate deaminase zinc-binding region
NCODAFGM_01187 9.8e-202 L Transposase and inactivated derivatives, IS30 family
NCODAFGM_01188 1.2e-182 yxaM EGP Major facilitator Superfamily
NCODAFGM_01189 4.3e-133 S Alpha/beta hydrolase family
NCODAFGM_01190 4.5e-94 rimL J Acetyltransferase (GNAT) domain
NCODAFGM_01191 3e-262
NCODAFGM_01192 1.7e-130 glsA 3.5.1.2 E Belongs to the glutaminase family
NCODAFGM_01193 4e-65
NCODAFGM_01194 6.9e-47 S MazG-like family
NCODAFGM_01195 4.1e-131 S Protein of unknown function (DUF2785)
NCODAFGM_01196 2.9e-57 K Acetyltransferase (GNAT) domain
NCODAFGM_01197 3e-91 speG J Acetyltransferase (GNAT) domain
NCODAFGM_01198 4.8e-49
NCODAFGM_01199 4.3e-281 V ABC transporter transmembrane region
NCODAFGM_01200 5.8e-288 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
NCODAFGM_01201 8.7e-229 S Tetratricopeptide repeat protein
NCODAFGM_01202 2.3e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
NCODAFGM_01203 1.9e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
NCODAFGM_01204 5.5e-212 rpsA 1.17.7.4 J Ribosomal protein S1
NCODAFGM_01205 1.5e-113 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
NCODAFGM_01206 2.7e-18 M Lysin motif
NCODAFGM_01207 8.7e-114 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
NCODAFGM_01208 3.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
NCODAFGM_01209 4.1e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
NCODAFGM_01210 7.6e-132 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
NCODAFGM_01211 4e-53 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
NCODAFGM_01212 7.6e-166 xerD D recombinase XerD
NCODAFGM_01213 5.2e-167 cvfB S S1 domain
NCODAFGM_01214 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
NCODAFGM_01215 3.3e-183 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
NCODAFGM_01216 0.0 dnaE 2.7.7.7 L DNA polymerase
NCODAFGM_01217 2.3e-23 S Protein of unknown function (DUF2929)
NCODAFGM_01218 2.6e-310 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
NCODAFGM_01219 1.3e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
NCODAFGM_01220 1.5e-34 yrvD S Lipopolysaccharide assembly protein A domain
NCODAFGM_01221 3e-142 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
NCODAFGM_01222 1.6e-174 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
NCODAFGM_01223 4.1e-294 I Acyltransferase
NCODAFGM_01224 1.7e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
NCODAFGM_01225 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
NCODAFGM_01226 5.2e-110 dedA 3.1.3.1 S SNARE associated Golgi protein
NCODAFGM_01227 1.1e-243 yfnA E Amino Acid
NCODAFGM_01228 8e-182 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
NCODAFGM_01229 1.5e-149 yxeH S hydrolase
NCODAFGM_01230 2.7e-32 S reductase
NCODAFGM_01231 4.4e-39 S reductase
NCODAFGM_01232 6e-10 S reductase
NCODAFGM_01233 1e-215 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
NCODAFGM_01234 3.5e-219 L Transposase
NCODAFGM_01235 2.6e-222 patA 2.6.1.1 E Aminotransferase
NCODAFGM_01236 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
NCODAFGM_01237 2.9e-243 hisS 6.1.1.21 J histidyl-tRNA synthetase
NCODAFGM_01238 6e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
NCODAFGM_01239 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
NCODAFGM_01240 3.2e-60
NCODAFGM_01241 1.9e-175 prmA J Ribosomal protein L11 methyltransferase
NCODAFGM_01242 4.1e-84 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
NCODAFGM_01243 3.5e-219 L Transposase
NCODAFGM_01244 7.2e-11
NCODAFGM_01245 1.1e-40
NCODAFGM_01246 2.2e-250 yjjP S Putative threonine/serine exporter
NCODAFGM_01247 3.5e-219 L Transposase
NCODAFGM_01248 2.6e-177 citR K Putative sugar-binding domain
NCODAFGM_01249 1.2e-49
NCODAFGM_01250 5.5e-09
NCODAFGM_01251 2.9e-66 S Domain of unknown function DUF1828
NCODAFGM_01252 1.5e-95 S UPF0397 protein
NCODAFGM_01253 0.0 ykoD P ABC transporter, ATP-binding protein
NCODAFGM_01254 1.1e-145 cbiQ P cobalt transport
NCODAFGM_01255 7e-22
NCODAFGM_01256 9.3e-72 yeaL S Protein of unknown function (DUF441)
NCODAFGM_01257 3.1e-44 L COG3547 Transposase and inactivated derivatives
NCODAFGM_01258 1.9e-158 L COG3547 Transposase and inactivated derivatives
NCODAFGM_01259 1.4e-289 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
NCODAFGM_01260 8.2e-168 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
NCODAFGM_01261 1.2e-43 citD C Covalent carrier of the coenzyme of citrate lyase
NCODAFGM_01262 6.9e-195 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
NCODAFGM_01263 3.8e-153 ydjP I Alpha/beta hydrolase family
NCODAFGM_01264 4.7e-274 P Sodium:sulfate symporter transmembrane region
NCODAFGM_01265 1.3e-133 hxlA 6.2.1.3 H Aldolase/RraA
NCODAFGM_01266 2.1e-257 pepC 3.4.22.40 E Peptidase C1-like family
NCODAFGM_01267 3.1e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
NCODAFGM_01268 2.8e-260 frdC 1.3.5.4 C FAD binding domain
NCODAFGM_01269 9e-267 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
NCODAFGM_01270 2e-73 metI P ABC transporter permease
NCODAFGM_01271 1e-190 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
NCODAFGM_01272 5.9e-160 metQ2 P Belongs to the nlpA lipoprotein family
NCODAFGM_01273 1.7e-176 F DNA/RNA non-specific endonuclease
NCODAFGM_01274 0.0 aha1 P E1-E2 ATPase
NCODAFGM_01275 1.5e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
NCODAFGM_01276 4.1e-178 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
NCODAFGM_01277 3.1e-251 yifK E Amino acid permease
NCODAFGM_01278 2.3e-287 V ABC-type multidrug transport system, ATPase and permease components
NCODAFGM_01279 4.7e-288 P ABC transporter
NCODAFGM_01280 1.5e-36
NCODAFGM_01282 4e-124 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
NCODAFGM_01283 2.5e-86 K GNAT family
NCODAFGM_01284 2.4e-121 XK27_00915 C Luciferase-like monooxygenase
NCODAFGM_01285 1.1e-31 XK27_00915 C Luciferase-like monooxygenase
NCODAFGM_01286 2.9e-196 S Uncharacterised protein family (UPF0236)
NCODAFGM_01287 4.1e-15 XK27_00915 C Luciferase-like monooxygenase
NCODAFGM_01288 5.5e-148 S cog cog1373
NCODAFGM_01289 5.3e-37 sugE U Multidrug resistance protein
NCODAFGM_01290 1.6e-16 S Flavodoxin-like fold
NCODAFGM_01291 6.9e-16 ywrO S Flavodoxin-like fold
NCODAFGM_01292 8.3e-63 S membrane transporter protein
NCODAFGM_01293 1.7e-29 S membrane transporter protein
NCODAFGM_01294 4.5e-219 L Transposase
NCODAFGM_01296 2.2e-38 C Aldo keto reductase
NCODAFGM_01297 3.2e-90 C Aldo keto reductase
NCODAFGM_01298 5.7e-34 S Protein of unknown function (DUF1211)
NCODAFGM_01300 1e-291 lmrA 3.6.3.44 V ABC transporter
NCODAFGM_01301 3.1e-56 K helix_turn_helix multiple antibiotic resistance protein
NCODAFGM_01302 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
NCODAFGM_01303 0.0 uvrA3 L excinuclease ABC, A subunit
NCODAFGM_01304 1.5e-99 S GyrI-like small molecule binding domain
NCODAFGM_01305 1.2e-151 V Beta-lactamase
NCODAFGM_01306 7.9e-123 5.3.3.2 C FMN-dependent dehydrogenase
NCODAFGM_01307 4.9e-208 uidA 3.2.1.31 G Belongs to the glycosyl hydrolase 2 family
NCODAFGM_01308 4.5e-49 uidA 3.2.1.31 G Belongs to the glycosyl hydrolase 2 family
NCODAFGM_01309 4.5e-81 S Polyphosphate nucleotide phosphotransferase, PPK2 family
NCODAFGM_01310 2.6e-40 S Polyphosphate nucleotide phosphotransferase, PPK2 family
NCODAFGM_01311 5.5e-127 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
NCODAFGM_01312 9.1e-195 S Uncharacterized protein conserved in bacteria (DUF2252)
NCODAFGM_01313 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
NCODAFGM_01314 6.1e-208 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
NCODAFGM_01315 1.1e-31 S Cytochrome B5
NCODAFGM_01316 1.2e-71 1.6.5.2 GM NmrA-like family
NCODAFGM_01317 2.9e-196 S Uncharacterised protein family (UPF0236)
NCODAFGM_01318 1.2e-65 1.6.5.2 GM NmrA-like family
NCODAFGM_01319 2e-80 proW P ABC transporter, permease protein
NCODAFGM_01320 3.8e-110 proV E ABC transporter, ATP-binding protein
NCODAFGM_01321 1.3e-87 proWZ P ABC transporter (Permease
NCODAFGM_01322 5.3e-127 proX M ABC transporter, substrate-binding protein, QAT family
NCODAFGM_01323 2.8e-68 K Transcriptional regulator
NCODAFGM_01324 6.8e-165 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
NCODAFGM_01326 2.3e-243 brnQ U Component of the transport system for branched-chain amino acids
NCODAFGM_01327 3e-69 yphH S Cupin domain
NCODAFGM_01328 1.3e-07 S Protein of unknown function (DUF3021)
NCODAFGM_01329 5.7e-83 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
NCODAFGM_01330 1.5e-37 4.2.1.6, 5.1.2.2 M Mandelate racemase muconate lactonizing enzyme
NCODAFGM_01331 1.7e-151 4.2.1.6, 5.1.2.2 M Mandelate racemase muconate lactonizing enzyme
NCODAFGM_01332 7.7e-31 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NCODAFGM_01333 2.7e-143 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NCODAFGM_01334 1.1e-46
NCODAFGM_01335 4.9e-66 K HxlR family
NCODAFGM_01336 0.0 L Plasmid pRiA4b ORF-3-like protein
NCODAFGM_01337 1.1e-245 brnQ U Component of the transport system for branched-chain amino acids
NCODAFGM_01338 7.4e-120 3.6.1.55 F NUDIX domain
NCODAFGM_01339 3.5e-219 L Transposase
NCODAFGM_01340 4.2e-34 S Alpha beta hydrolase
NCODAFGM_01341 1.2e-42 S Alpha beta hydrolase
NCODAFGM_01342 9.5e-158 K Transcriptional regulator
NCODAFGM_01343 3e-75 K LytTr DNA-binding domain
NCODAFGM_01344 4.5e-65 S Protein of unknown function (DUF3021)
NCODAFGM_01345 2.1e-143 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
NCODAFGM_01346 1.3e-199 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
NCODAFGM_01347 4e-107 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
NCODAFGM_01348 6.3e-229 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
NCODAFGM_01349 1.9e-80 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
NCODAFGM_01350 7.7e-31 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NCODAFGM_01351 6.6e-142 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NCODAFGM_01352 3.1e-206 G Glycosyl hydrolases family 8
NCODAFGM_01353 1.1e-245 ydaM M Glycosyl transferase
NCODAFGM_01355 7.2e-150
NCODAFGM_01356 1.3e-66 M Peptidase family M1 domain
NCODAFGM_01357 2.8e-138 L An automated process has identified a potential problem with this gene model
NCODAFGM_01358 3.3e-234 mepA V MATE efflux family protein
NCODAFGM_01359 4.8e-18 yjaB 2.3.1.181 K Acetyltransferase (GNAT) domain
NCODAFGM_01360 2.6e-36 yjaB 2.3.1.181 K Acetyltransferase (GNAT) domain
NCODAFGM_01361 9.9e-71 S Putative adhesin
NCODAFGM_01362 8.4e-105 yihX 3.1.3.10, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
NCODAFGM_01363 3.6e-12 S Uncharacterised protein family (UPF0158)
NCODAFGM_01364 3.8e-84 dps P Belongs to the Dps family
NCODAFGM_01365 1.8e-55 S pyridoxamine 5-phosphate
NCODAFGM_01366 2.4e-130 yobV1 K WYL domain
NCODAFGM_01367 4.1e-86 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
NCODAFGM_01368 8e-78 dps P Belongs to the Dps family
NCODAFGM_01369 1.2e-30 copZ C Heavy-metal-associated domain
NCODAFGM_01370 1e-284 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
NCODAFGM_01371 8.2e-68 XK26_02160 S Pyridoxamine 5'-phosphate oxidase
NCODAFGM_01372 4.3e-173 MA20_14895 S Conserved hypothetical protein 698
NCODAFGM_01374 1.1e-178 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
NCODAFGM_01375 1.2e-100 3.6.1.27 I Acid phosphatase homologues
NCODAFGM_01376 1.8e-150 yitS S Uncharacterised protein, DegV family COG1307
NCODAFGM_01377 4.4e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
NCODAFGM_01378 4.8e-90 S Domain of unknown function (DUF4767)
NCODAFGM_01379 7.9e-85 C nitroreductase
NCODAFGM_01380 4.6e-136 ypbG 2.7.1.2 GK ROK family
NCODAFGM_01381 2.9e-273 bglA3 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
NCODAFGM_01382 3.7e-223 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
NCODAFGM_01383 8.6e-120 gmuR K UTRA
NCODAFGM_01384 6.5e-300 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
NCODAFGM_01385 3.2e-71 S Domain of unknown function (DUF3284)
NCODAFGM_01386 2.5e-250 celD G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
NCODAFGM_01387 4.4e-86
NCODAFGM_01388 8.7e-60 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
NCODAFGM_01389 1.6e-55 celA1 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
NCODAFGM_01390 3.7e-128 K UTRA domain
NCODAFGM_01391 2e-293 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
NCODAFGM_01392 2.2e-90 alkD L DNA alkylation repair enzyme
NCODAFGM_01393 1.3e-176 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
NCODAFGM_01394 1.9e-81
NCODAFGM_01395 3.6e-39 C FMN_bind
NCODAFGM_01396 2.3e-298 I Protein of unknown function (DUF2974)
NCODAFGM_01397 4.3e-195 pbpX1 V Beta-lactamase
NCODAFGM_01398 2.3e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
NCODAFGM_01399 1.2e-216 aspC 2.6.1.1 E Aminotransferase
NCODAFGM_01400 9.2e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
NCODAFGM_01401 9.8e-177 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
NCODAFGM_01402 1.4e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
NCODAFGM_01403 1.4e-74 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
NCODAFGM_01404 1.1e-247 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
NCODAFGM_01405 5.1e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
NCODAFGM_01406 2.3e-192 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
NCODAFGM_01407 2.2e-177 yjeM E Amino Acid
NCODAFGM_01408 1.7e-38 yjeM E Amino Acid
NCODAFGM_01409 3.7e-105 engB D Necessary for normal cell division and for the maintenance of normal septation
NCODAFGM_01410 1.7e-232 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
NCODAFGM_01411 4e-216 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
NCODAFGM_01412 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
NCODAFGM_01413 3.1e-150
NCODAFGM_01414 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NCODAFGM_01415 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
NCODAFGM_01416 6.7e-35 rpsT J Binds directly to 16S ribosomal RNA
NCODAFGM_01417 2.6e-175 holA 2.7.7.7 L DNA polymerase III delta subunit
NCODAFGM_01418 0.0 comEC S Competence protein ComEC
NCODAFGM_01419 3.1e-79 comEA L Competence protein ComEA
NCODAFGM_01420 5.3e-187 ylbL T Belongs to the peptidase S16 family
NCODAFGM_01421 3.6e-82 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
NCODAFGM_01422 4.5e-97 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
NCODAFGM_01423 2.5e-53 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
NCODAFGM_01424 1.2e-211 ftsW D Belongs to the SEDS family
NCODAFGM_01425 0.0 typA T GTP-binding protein TypA
NCODAFGM_01426 4e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
NCODAFGM_01427 9.3e-33 ykzG S Belongs to the UPF0356 family
NCODAFGM_01428 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
NCODAFGM_01429 1.2e-182 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
NCODAFGM_01430 7.7e-294 L Nuclease-related domain
NCODAFGM_01431 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
NCODAFGM_01432 8.3e-106 S Repeat protein
NCODAFGM_01433 3.9e-127 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
NCODAFGM_01434 1.3e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
NCODAFGM_01435 8.3e-57 XK27_04120 S Putative amino acid metabolism
NCODAFGM_01436 3.2e-217 iscS 2.8.1.7 E Aminotransferase class V
NCODAFGM_01437 1.2e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
NCODAFGM_01438 3e-37
NCODAFGM_01439 1.3e-102 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
NCODAFGM_01440 3.6e-31 cspA K 'Cold-shock' DNA-binding domain
NCODAFGM_01441 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
NCODAFGM_01442 2.8e-74 gpsB D DivIVA domain protein
NCODAFGM_01443 6.7e-150 ylmH S S4 domain protein
NCODAFGM_01444 1.7e-45 yggT S YGGT family
NCODAFGM_01445 7.3e-74 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
NCODAFGM_01446 1.7e-209 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
NCODAFGM_01447 7.7e-247 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
NCODAFGM_01448 4.5e-152 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
NCODAFGM_01449 5.7e-208 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
NCODAFGM_01450 5e-262 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
NCODAFGM_01451 1.5e-175 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
NCODAFGM_01452 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
NCODAFGM_01453 1.8e-54 ftsL D Cell division protein FtsL
NCODAFGM_01454 3.8e-176 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
NCODAFGM_01455 6.3e-78 mraZ K Belongs to the MraZ family
NCODAFGM_01456 1.7e-198 L Transposase and inactivated derivatives, IS30 family
NCODAFGM_01457 6.4e-54 S Protein of unknown function (DUF3397)
NCODAFGM_01459 2.7e-94 mreD
NCODAFGM_01460 2e-147 mreC M Involved in formation and maintenance of cell shape
NCODAFGM_01461 2.4e-176 mreB D cell shape determining protein MreB
NCODAFGM_01462 5e-108 radC L DNA repair protein
NCODAFGM_01463 1.7e-125 S Haloacid dehalogenase-like hydrolase
NCODAFGM_01464 1.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
NCODAFGM_01465 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
NCODAFGM_01466 2.1e-67
NCODAFGM_01467 1.9e-40 K Helix-turn-helix XRE-family like proteins
NCODAFGM_01468 2.7e-61 S Phage derived protein Gp49-like (DUF891)
NCODAFGM_01469 1.6e-134 P Major Facilitator Superfamily
NCODAFGM_01470 3.3e-206 1.3.5.4 C FAD dependent oxidoreductase
NCODAFGM_01471 6.7e-159 K Helix-turn-helix domain
NCODAFGM_01472 5.6e-164
NCODAFGM_01473 0.0 3.6.3.8 P P-type ATPase
NCODAFGM_01475 2.9e-44
NCODAFGM_01476 1.8e-33 S Protein of unknown function (DUF3990)
NCODAFGM_01477 1.2e-43 S Protein of unknown function (DUF3990)
NCODAFGM_01478 3.1e-170 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
NCODAFGM_01479 2.1e-65 2.4.1.83 GT2 S GtrA-like protein
NCODAFGM_01480 8e-43 3.6.4.12 S PD-(D/E)XK nuclease family transposase
NCODAFGM_01481 2.4e-119 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
NCODAFGM_01482 2.3e-184 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
NCODAFGM_01483 2e-225 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
NCODAFGM_01484 7.4e-214 iscS2 2.8.1.7 E Aminotransferase class V
NCODAFGM_01485 8.1e-294 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
NCODAFGM_01486 1.4e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
NCODAFGM_01487 9.9e-85 yueI S Protein of unknown function (DUF1694)
NCODAFGM_01488 7.4e-239 rarA L recombination factor protein RarA
NCODAFGM_01489 4.2e-38
NCODAFGM_01490 4e-78 usp6 T universal stress protein
NCODAFGM_01491 1.1e-215 rodA D Belongs to the SEDS family
NCODAFGM_01492 1.5e-33 S Protein of unknown function (DUF2969)
NCODAFGM_01493 2e-51 yidD S Could be involved in insertion of integral membrane proteins into the membrane
NCODAFGM_01494 2.5e-178 mbl D Cell shape determining protein MreB Mrl
NCODAFGM_01495 4.1e-31 ywzB S Protein of unknown function (DUF1146)
NCODAFGM_01496 3.4e-71 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
NCODAFGM_01497 5.7e-240 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
NCODAFGM_01498 8.9e-173 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
NCODAFGM_01499 2.5e-283 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
NCODAFGM_01500 2.8e-91 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NCODAFGM_01501 3.4e-46 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
NCODAFGM_01502 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
NCODAFGM_01503 1e-128 atpB C it plays a direct role in the translocation of protons across the membrane
NCODAFGM_01504 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
NCODAFGM_01505 1.4e-189 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
NCODAFGM_01506 6.2e-154 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
NCODAFGM_01507 3.1e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
NCODAFGM_01508 2.1e-111 tdk 2.7.1.21 F thymidine kinase
NCODAFGM_01509 1.4e-261 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
NCODAFGM_01512 1e-195 ampC V Beta-lactamase
NCODAFGM_01513 1.6e-75 L Helix-turn-helix domain
NCODAFGM_01514 5.2e-16 L Helix-turn-helix domain
NCODAFGM_01515 6.5e-137 L hmm pf00665
NCODAFGM_01516 4.4e-218 EGP Major facilitator Superfamily
NCODAFGM_01517 3.2e-253 pgi 5.3.1.9 G Belongs to the GPI family
NCODAFGM_01518 1.1e-104 vanZ V VanZ like family
NCODAFGM_01519 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
NCODAFGM_01520 9.4e-267 yclK 2.7.13.3, 4.6.1.1 T Histidine kinase
NCODAFGM_01521 7.5e-132 K Transcriptional regulatory protein, C terminal
NCODAFGM_01522 7.7e-67 S SdpI/YhfL protein family
NCODAFGM_01523 7.2e-191 manA 5.3.1.8 G mannose-6-phosphate isomerase
NCODAFGM_01524 7.6e-227 patB 4.4.1.8 E Aminotransferase, class I
NCODAFGM_01525 9.6e-89 M Protein of unknown function (DUF3737)
NCODAFGM_01526 1.8e-59 L An automated process has identified a potential problem with this gene model
NCODAFGM_01527 3.6e-25 L An automated process has identified a potential problem with this gene model
NCODAFGM_01528 1.4e-167 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
NCODAFGM_01529 2.1e-45
NCODAFGM_01530 2.6e-105 3.6.1.13, 3.6.1.55 F NUDIX domain
NCODAFGM_01531 3e-225 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
NCODAFGM_01532 2.4e-90 pncA Q Isochorismatase family
NCODAFGM_01533 7.3e-44 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S HAD-hyrolase-like
NCODAFGM_01534 1e-289 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
NCODAFGM_01535 6.8e-25 L An automated process has identified a potential problem with this gene model
NCODAFGM_01536 1.8e-59 L An automated process has identified a potential problem with this gene model
NCODAFGM_01538 3.3e-11 S Domain of Unknown Function with PDB structure (DUF3850)
NCODAFGM_01539 1.5e-96 D VirC1 protein
NCODAFGM_01541 6e-40 relB L RelB antitoxin
NCODAFGM_01542 1.9e-28 S Bacterial toxin of type II toxin-antitoxin system, YafQ
NCODAFGM_01543 8.8e-226 L COG3547 Transposase and inactivated derivatives
NCODAFGM_01544 1.2e-85
NCODAFGM_01545 3.5e-219 L Transposase
NCODAFGM_01546 1.9e-160 L PFAM transposase, IS4 family protein
NCODAFGM_01547 3.7e-24 XK27_07075 S CAAX protease self-immunity
NCODAFGM_01549 4.1e-132 topA2 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
NCODAFGM_01551 1.4e-16 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
NCODAFGM_01552 2.2e-23 relB L Addiction module antitoxin, RelB DinJ family
NCODAFGM_01553 5.8e-48 E Pfam:DUF955
NCODAFGM_01554 1.1e-19 EL Toprim-like
NCODAFGM_01555 9.5e-38 L Protein of unknown function (DUF3991)
NCODAFGM_01556 3.5e-49 S COG0790 FOG TPR repeat, SEL1 subfamily
NCODAFGM_01562 2.4e-18 CO COG0526, thiol-disulfide isomerase and thioredoxins
NCODAFGM_01565 2.7e-32 M Peptidase family M23
NCODAFGM_01566 3.3e-161 trsE S COG0433 Predicted ATPase
NCODAFGM_01567 1.1e-14
NCODAFGM_01569 3.9e-32 I mechanosensitive ion channel activity
NCODAFGM_01570 7.6e-140 U TraM recognition site of TraD and TraG
NCODAFGM_01574 2e-42 M domain protein
NCODAFGM_01575 1.4e-38 M domain protein
NCODAFGM_01577 1.4e-24 srtA 3.4.22.70 M sortase family
NCODAFGM_01578 4.8e-25 S SLAP domain
NCODAFGM_01584 2.6e-11 ssb L Single-strand binding protein family
NCODAFGM_01590 3.2e-24 S Domain of unknown function (DUF771)
NCODAFGM_01591 1.8e-32 K Helix-turn-helix domain
NCODAFGM_01592 9e-22 XK27_07105 K Helix-turn-helix XRE-family like proteins
NCODAFGM_01593 7.2e-24 K Cro/C1-type HTH DNA-binding domain
NCODAFGM_01594 5e-08 S Pfam:DUF955
NCODAFGM_01595 1.2e-152 L Belongs to the 'phage' integrase family
NCODAFGM_01597 6.3e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NCODAFGM_01598 3.5e-188 ytxK 2.1.1.72 L N-6 DNA Methylase
NCODAFGM_01599 1.6e-21
NCODAFGM_01600 4.2e-76 comGF U Putative Competence protein ComGF
NCODAFGM_01601 2.3e-41
NCODAFGM_01602 7.4e-71
NCODAFGM_01603 3.1e-43 comGC U competence protein ComGC
NCODAFGM_01604 2.7e-172 comGB NU type II secretion system
NCODAFGM_01605 1.7e-179 comGA NU Type II IV secretion system protein
NCODAFGM_01606 8.9e-133 yebC K Transcriptional regulatory protein
NCODAFGM_01607 2e-94 S VanZ like family
NCODAFGM_01608 3.2e-110 ylbE GM NAD(P)H-binding
NCODAFGM_01609 9.8e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
NCODAFGM_01611 2e-302 E Amino acid permease
NCODAFGM_01612 4.7e-174 D Alpha beta
NCODAFGM_01613 7.7e-301 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
NCODAFGM_01614 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
NCODAFGM_01615 3.4e-35 licT K CAT RNA binding domain
NCODAFGM_01616 1.1e-86 licT K CAT RNA binding domain
NCODAFGM_01617 1e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
NCODAFGM_01618 7.4e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
NCODAFGM_01619 7.2e-119
NCODAFGM_01620 1.8e-75 K Penicillinase repressor
NCODAFGM_01621 1.4e-147 S hydrolase
NCODAFGM_01622 6.9e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
NCODAFGM_01623 2e-172 ybbR S YbbR-like protein
NCODAFGM_01624 6.4e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
NCODAFGM_01625 7.3e-208 potD P ABC transporter
NCODAFGM_01626 4.8e-127 potC P ABC transporter permease
NCODAFGM_01627 5.1e-129 potB P ABC transporter permease
NCODAFGM_01628 1.8e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
NCODAFGM_01629 1.8e-164 murB 1.3.1.98 M Cell wall formation
NCODAFGM_01630 4e-98 dnaQ 2.7.7.7 L DNA polymerase III
NCODAFGM_01631 1.4e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
NCODAFGM_01632 1.8e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
NCODAFGM_01633 9.7e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
NCODAFGM_01634 1.5e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
NCODAFGM_01635 1.2e-94
NCODAFGM_01636 1.7e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
NCODAFGM_01637 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
NCODAFGM_01638 6.5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
NCODAFGM_01639 2.6e-189 cggR K Putative sugar-binding domain
NCODAFGM_01641 2.8e-290
NCODAFGM_01642 1.1e-272 ycaM E amino acid
NCODAFGM_01643 2.1e-140 S Cysteine-rich secretory protein family
NCODAFGM_01644 3.2e-77 K MerR HTH family regulatory protein
NCODAFGM_01645 1.6e-261 lmrB EGP Major facilitator Superfamily
NCODAFGM_01646 4.3e-95 S Domain of unknown function (DUF4811)
NCODAFGM_01647 2.5e-130 ybbM S Uncharacterised protein family (UPF0014)
NCODAFGM_01648 4.9e-111 ybbL S ABC transporter, ATP-binding protein
NCODAFGM_01649 0.0 S SH3-like domain
NCODAFGM_01650 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
NCODAFGM_01651 2.1e-171 whiA K May be required for sporulation
NCODAFGM_01652 4.4e-194 ybhK S Required for morphogenesis under gluconeogenic growth conditions
NCODAFGM_01653 6.2e-165 rapZ S Displays ATPase and GTPase activities
NCODAFGM_01654 1.1e-90 S Short repeat of unknown function (DUF308)
NCODAFGM_01655 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
NCODAFGM_01656 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
NCODAFGM_01657 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
NCODAFGM_01658 3.9e-181 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
NCODAFGM_01659 1.1e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
NCODAFGM_01660 4.9e-159 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
NCODAFGM_01661 5.8e-180 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
NCODAFGM_01662 5.1e-17
NCODAFGM_01663 4.6e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
NCODAFGM_01664 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
NCODAFGM_01665 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
NCODAFGM_01666 8.5e-133 comFC S Competence protein
NCODAFGM_01667 4e-245 comFA L Helicase C-terminal domain protein
NCODAFGM_01668 5.1e-119 yvyE 3.4.13.9 S YigZ family
NCODAFGM_01669 1.3e-210 tagO 2.7.8.33, 2.7.8.35 M transferase
NCODAFGM_01670 7.4e-220 rny S Endoribonuclease that initiates mRNA decay
NCODAFGM_01671 4.2e-195 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
NCODAFGM_01672 1.1e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
NCODAFGM_01673 5.2e-97 ymfM S Helix-turn-helix domain
NCODAFGM_01674 4.4e-132 IQ Enoyl-(Acyl carrier protein) reductase
NCODAFGM_01675 6.2e-235 S Peptidase M16
NCODAFGM_01676 9e-223 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
NCODAFGM_01677 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
NCODAFGM_01678 1.7e-69 WQ51_03320 S Protein of unknown function (DUF1149)
NCODAFGM_01679 4.2e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
NCODAFGM_01680 2.6e-214 yubA S AI-2E family transporter
NCODAFGM_01681 2.2e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
NCODAFGM_01682 1.4e-200 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
NCODAFGM_01683 4.7e-91 S SNARE associated Golgi protein
NCODAFGM_01684 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
NCODAFGM_01685 4.6e-171 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
NCODAFGM_01686 5e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
NCODAFGM_01687 1.2e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
NCODAFGM_01688 2.6e-109 yjbK S CYTH
NCODAFGM_01689 4.6e-114 yjbH Q Thioredoxin
NCODAFGM_01690 5.8e-160 coiA 3.6.4.12 S Competence protein
NCODAFGM_01691 8.5e-139 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
NCODAFGM_01692 3.9e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
NCODAFGM_01693 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
NCODAFGM_01694 8.5e-41 ptsH G phosphocarrier protein HPR
NCODAFGM_01695 1.5e-25
NCODAFGM_01696 0.0 clpE O Belongs to the ClpA ClpB family
NCODAFGM_01697 2.3e-44 XK27_09445 S Domain of unknown function (DUF1827)
NCODAFGM_01698 3.5e-31
NCODAFGM_01699 7.3e-50 L Transposase
NCODAFGM_01700 3.4e-129 L COG2826 Transposase and inactivated derivatives, IS30 family
NCODAFGM_01701 8.3e-261 V ABC transporter transmembrane region
NCODAFGM_01702 5.4e-147
NCODAFGM_01703 1.2e-304 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
NCODAFGM_01704 1.1e-140 hlyX S Transporter associated domain
NCODAFGM_01705 1.6e-74
NCODAFGM_01706 1.6e-85
NCODAFGM_01707 1.5e-144 recX 2.4.1.337 GT4 S Regulatory protein RecX
NCODAFGM_01708 5.4e-264 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NCODAFGM_01709 8.9e-178 D Alpha beta
NCODAFGM_01710 9.4e-46
NCODAFGM_01711 1.9e-217 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
NCODAFGM_01712 3.4e-214 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
NCODAFGM_01713 1.1e-214 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
NCODAFGM_01714 7.3e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
NCODAFGM_01715 3.6e-163 yihY S Belongs to the UPF0761 family
NCODAFGM_01716 1.9e-163 map 3.4.11.18 E Methionine Aminopeptidase
NCODAFGM_01717 4.1e-80 fld C Flavodoxin
NCODAFGM_01718 3.1e-87 gtcA S Teichoic acid glycosylation protein
NCODAFGM_01719 2e-216 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
NCODAFGM_01721 6.2e-249 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
NCODAFGM_01722 1.1e-210 yfmL 3.6.4.13 L DEAD DEAH box helicase
NCODAFGM_01723 4.7e-131 M Glycosyl hydrolases family 25
NCODAFGM_01724 4.1e-229 potE E amino acid
NCODAFGM_01725 0.0 1.3.5.4 C FAD binding domain
NCODAFGM_01726 9.9e-49 L PFAM transposase, IS4 family protein
NCODAFGM_01727 2.9e-88 L PFAM transposase, IS4 family protein
NCODAFGM_01728 5.9e-94 1.3.5.4 C FAD binding domain
NCODAFGM_01729 1.8e-226 1.3.5.4 C FAD binding domain
NCODAFGM_01730 9.8e-202 L Transposase and inactivated derivatives, IS30 family
NCODAFGM_01731 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
NCODAFGM_01732 7.4e-250 yhdP S Transporter associated domain
NCODAFGM_01733 3.9e-119 C nitroreductase
NCODAFGM_01734 3.6e-39
NCODAFGM_01735 2.9e-87 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
NCODAFGM_01736 1.6e-80
NCODAFGM_01737 4.1e-147 glvR K Helix-turn-helix domain, rpiR family
NCODAFGM_01738 0.0 glvC 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
NCODAFGM_01739 2.8e-148 S hydrolase
NCODAFGM_01740 1.5e-160 rssA S Phospholipase, patatin family
NCODAFGM_01741 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
NCODAFGM_01742 3.1e-136 glcR K DeoR C terminal sensor domain
NCODAFGM_01743 2.5e-59 S Enterocin A Immunity
NCODAFGM_01744 1.2e-154 S hydrolase
NCODAFGM_01745 1.2e-132 ydhQ K UbiC transcription regulator-associated domain protein
NCODAFGM_01746 3.1e-175 rihB 3.2.2.1 F Nucleoside
NCODAFGM_01747 0.0 kup P Transport of potassium into the cell
NCODAFGM_01748 3.4e-126 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
NCODAFGM_01749 5.4e-167 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
NCODAFGM_01750 7.7e-162 2.7.7.12 C Domain of unknown function (DUF4931)
NCODAFGM_01751 1.2e-233 G Bacterial extracellular solute-binding protein
NCODAFGM_01752 1.8e-211 S Uncharacterized protein conserved in bacteria (DUF2325)
NCODAFGM_01753 5.6e-86
NCODAFGM_01754 1.1e-164 S Protein of unknown function (DUF2974)
NCODAFGM_01755 4.7e-109 glnP P ABC transporter permease
NCODAFGM_01756 9.7e-91 gluC P ABC transporter permease
NCODAFGM_01757 1.5e-149 glnH ET ABC transporter substrate-binding protein
NCODAFGM_01758 1.9e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
NCODAFGM_01759 3.6e-114 udk 2.7.1.48 F Zeta toxin
NCODAFGM_01760 2.5e-253 G MFS/sugar transport protein
NCODAFGM_01761 3.8e-102 S ABC-type cobalt transport system, permease component
NCODAFGM_01762 0.0 V ABC transporter transmembrane region
NCODAFGM_01763 1.8e-304 XK27_09600 V ABC transporter, ATP-binding protein
NCODAFGM_01764 1.9e-59 K Transcriptional regulator, MarR family
NCODAFGM_01765 1.8e-129 glnH ET ABC transporter
NCODAFGM_01766 2.4e-227 mmuP E amino acid
NCODAFGM_01767 1.1e-135 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
NCODAFGM_01769 0.0 S PglZ domain
NCODAFGM_01770 6.1e-80 S SIR2-like domain
NCODAFGM_01771 0.0 2.1.1.72 LV Eco57I restriction-modification methylase
NCODAFGM_01772 8.9e-221 FbpA 3.1.21.3, 3.2.1.170 GH38 K RNA-binding protein homologous to eukaryotic snRNP
NCODAFGM_01773 6.5e-105 S Domain of unknown function (DUF1788)
NCODAFGM_01774 8.2e-100 S Putative inner membrane protein (DUF1819)
NCODAFGM_01775 1.2e-29 K Helix-turn-helix domain
NCODAFGM_01776 8.9e-39 S Phage derived protein Gp49-like (DUF891)
NCODAFGM_01778 6.3e-117 yfeJ 6.3.5.2 F glutamine amidotransferase
NCODAFGM_01779 3.9e-243 steT E amino acid
NCODAFGM_01780 8e-241 steT E amino acid
NCODAFGM_01781 6.1e-151
NCODAFGM_01782 5.9e-174 S Aldo keto reductase
NCODAFGM_01783 2.2e-311 ybiT S ABC transporter, ATP-binding protein
NCODAFGM_01784 6e-210 pepA E M42 glutamyl aminopeptidase
NCODAFGM_01785 5.2e-99
NCODAFGM_01786 2.4e-136
NCODAFGM_01787 1.1e-217 mdtG EGP Major facilitator Superfamily
NCODAFGM_01788 2.9e-260 emrY EGP Major facilitator Superfamily
NCODAFGM_01789 4.7e-91 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
NCODAFGM_01790 2.9e-238 pyrP F Permease
NCODAFGM_01791 5.6e-286 K Putative DNA-binding domain
NCODAFGM_01792 2e-29
NCODAFGM_01793 7.8e-157 S reductase
NCODAFGM_01794 2.6e-40
NCODAFGM_01795 4.9e-201 L Transposase and inactivated derivatives, IS30 family
NCODAFGM_01797 2.4e-207 V ABC transporter transmembrane region
NCODAFGM_01798 2.4e-94 K Helix-turn-helix XRE-family like proteins
NCODAFGM_01799 5.8e-85 2.3.1.128 K Acetyltransferase (GNAT) domain
NCODAFGM_01800 1.4e-148 S cog cog1373
NCODAFGM_01801 0.0 4.2.1.53 S Myosin-crossreactive antigen
NCODAFGM_01802 2e-91 yxdD K Bacterial regulatory proteins, tetR family
NCODAFGM_01803 2.9e-260 emrY EGP Major facilitator Superfamily
NCODAFGM_01808 1.1e-94 MA20_25245 K Acetyltransferase (GNAT) domain
NCODAFGM_01809 5.8e-255 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
NCODAFGM_01810 7.3e-197 pbpX V Beta-lactamase
NCODAFGM_01811 2.1e-231 nhaC C Na H antiporter NhaC
NCODAFGM_01812 2.2e-23 I transferase activity, transferring acyl groups other than amino-acyl groups
NCODAFGM_01813 1e-49
NCODAFGM_01814 9.7e-108 ybhL S Belongs to the BI1 family
NCODAFGM_01815 2.1e-171 yegS 2.7.1.107 G Lipid kinase
NCODAFGM_01816 4.1e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NCODAFGM_01817 5.2e-270 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
NCODAFGM_01818 1.5e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
NCODAFGM_01819 5.8e-203 camS S sex pheromone
NCODAFGM_01820 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
NCODAFGM_01821 1.4e-308 pcrA 3.6.4.12 L ATP-dependent DNA helicase
NCODAFGM_01822 3.1e-108 pcrA 3.6.4.12 L ATP-dependent DNA helicase
NCODAFGM_01823 2.5e-86 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
NCODAFGM_01825 5.3e-83 ydcK S Belongs to the SprT family
NCODAFGM_01826 7.7e-134 M Glycosyltransferase sugar-binding region containing DXD motif
NCODAFGM_01827 1.9e-259 epsU S Polysaccharide biosynthesis protein
NCODAFGM_01828 6e-224 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
NCODAFGM_01829 0.0 pacL 3.6.3.8 P P-type ATPase
NCODAFGM_01830 3.1e-204 tnpB L Putative transposase DNA-binding domain
NCODAFGM_01831 4e-153 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
NCODAFGM_01832 2.4e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
NCODAFGM_01833 2.6e-205 csaB M Glycosyl transferases group 1
NCODAFGM_01834 9.5e-135 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
NCODAFGM_01835 5.1e-71 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
NCODAFGM_01836 1.3e-125 gntR1 K UTRA
NCODAFGM_01837 4.3e-179
NCODAFGM_01838 1.3e-298 oppA2 E ABC transporter, substratebinding protein
NCODAFGM_01841 3.5e-239 npr 1.11.1.1 C NADH oxidase
NCODAFGM_01842 7.7e-12
NCODAFGM_01843 1.3e-22 3.6.4.12 S transposase or invertase
NCODAFGM_01844 2.3e-228 slpX S SLAP domain
NCODAFGM_01845 4.4e-144 K SIS domain
NCODAFGM_01846 8.1e-120 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
NCODAFGM_01847 1.1e-186 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
NCODAFGM_01848 5.9e-219 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
NCODAFGM_01849 4e-119 sip L Belongs to the 'phage' integrase family
NCODAFGM_01850 4.4e-13 K Transcriptional regulator
NCODAFGM_01851 6.6e-24 S Helix-turn-helix domain
NCODAFGM_01852 7e-31
NCODAFGM_01853 9.6e-36
NCODAFGM_01855 1.6e-33
NCODAFGM_01857 2.5e-16
NCODAFGM_01859 2.3e-195 L COG2826 Transposase and inactivated derivatives, IS30 family
NCODAFGM_01860 9.6e-113 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
NCODAFGM_01861 6.2e-117 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
NCODAFGM_01862 7.5e-89 G Histidine phosphatase superfamily (branch 1)
NCODAFGM_01863 1.2e-105 G Phosphoglycerate mutase family
NCODAFGM_01864 2.2e-156 D nuclear chromosome segregation
NCODAFGM_01865 1.1e-76 M LysM domain protein
NCODAFGM_01866 3.9e-235 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
NCODAFGM_01867 6.2e-12
NCODAFGM_01868 1.1e-172 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
NCODAFGM_01869 2.3e-30
NCODAFGM_01871 1.5e-70 S Iron-sulphur cluster biosynthesis
NCODAFGM_01872 4.2e-112 yncA 2.3.1.79 S Maltose acetyltransferase
NCODAFGM_01873 2.3e-61 psiE S Phosphate-starvation-inducible E
NCODAFGM_01874 6.7e-186 L Belongs to the 'phage' integrase family
NCODAFGM_01875 4.9e-22
NCODAFGM_01876 8e-151 repB EP Plasmid replication protein
NCODAFGM_01878 4.6e-21
NCODAFGM_01880 6.7e-156 D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
NCODAFGM_01881 8.5e-40
NCODAFGM_01889 4.4e-135 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
NCODAFGM_01890 1.6e-227 amtB P ammonium transporter
NCODAFGM_01891 1.4e-60
NCODAFGM_01892 0.0 lhr L DEAD DEAH box helicase
NCODAFGM_01893 7e-245 P P-loop Domain of unknown function (DUF2791)
NCODAFGM_01894 0.0 S TerB-C domain
NCODAFGM_01895 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
NCODAFGM_01896 1.5e-297 V ABC transporter transmembrane region
NCODAFGM_01898 5.1e-156 K Helix-turn-helix XRE-family like proteins
NCODAFGM_01899 7.4e-68 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
NCODAFGM_01900 1.7e-141 G MFS/sugar transport protein
NCODAFGM_01901 7.9e-64 aepX 2.7.7.15, 2.7.7.39, 5.4.2.9 GIM Phosphoenolpyruvate phosphomutase
NCODAFGM_01902 1.5e-96 M Belongs to the mandelate racemase muconate lactonizing enzyme family
NCODAFGM_01903 2.5e-79 aatA 2.6.1.1 E PFAM Aminotransferase class I and II
NCODAFGM_01904 3.7e-43 F ATP-grasp domain
NCODAFGM_01905 5.7e-71 6.3.4.18, 6.3.5.5 F 5-(carboxyamino)imidazole ribonucleotide synthase activity
NCODAFGM_01907 6e-40 K Helix-turn-helix XRE-family like proteins
NCODAFGM_01908 2.1e-32
NCODAFGM_01909 3.5e-123 4.1.1.44 S Carboxymuconolactone decarboxylase family
NCODAFGM_01910 3.1e-220 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
NCODAFGM_01911 1e-78 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
NCODAFGM_01912 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
NCODAFGM_01913 0.0 mtlR K Mga helix-turn-helix domain
NCODAFGM_01914 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
NCODAFGM_01915 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
NCODAFGM_01916 1.6e-244 cycA E Amino acid permease
NCODAFGM_01917 9.9e-86 maa S transferase hexapeptide repeat
NCODAFGM_01918 9.7e-158 K Transcriptional regulator
NCODAFGM_01919 9.9e-64 manO S Domain of unknown function (DUF956)
NCODAFGM_01920 1e-173 manN G system, mannose fructose sorbose family IID component
NCODAFGM_01921 1.7e-129 manY G PTS system
NCODAFGM_01922 2.4e-184 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
NCODAFGM_01926 3.4e-166 UW LPXTG-motif cell wall anchor domain protein
NCODAFGM_01927 2.3e-23 UW LPXTG-motif cell wall anchor domain protein
NCODAFGM_01928 3.9e-248 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
NCODAFGM_01929 5.4e-98 J Acetyltransferase (GNAT) domain
NCODAFGM_01930 1.8e-110 yjbF S SNARE associated Golgi protein
NCODAFGM_01931 6e-151 I alpha/beta hydrolase fold
NCODAFGM_01932 1e-58 hipB K Helix-turn-helix
NCODAFGM_01933 1.5e-269 L Transposase DDE domain
NCODAFGM_01934 3.8e-79 hipB K Helix-turn-helix
NCODAFGM_01935 1.5e-91 F Nucleoside 2-deoxyribosyltransferase
NCODAFGM_01936 3.6e-260 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
NCODAFGM_01937 5.9e-151
NCODAFGM_01938 0.0 ydgH S MMPL family
NCODAFGM_01939 2.3e-99 yobS K Bacterial regulatory proteins, tetR family
NCODAFGM_01940 1.4e-146 3.5.2.6 V Beta-lactamase enzyme family
NCODAFGM_01941 1.2e-153 corA P CorA-like Mg2+ transporter protein
NCODAFGM_01942 9.6e-239 G Bacterial extracellular solute-binding protein
NCODAFGM_01943 2.4e-258 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
NCODAFGM_01944 6.1e-146 gtsC P Binding-protein-dependent transport system inner membrane component
NCODAFGM_01945 2.1e-157 gtsB P ABC-type sugar transport systems, permease components
NCODAFGM_01946 1.1e-203 malK P ATPases associated with a variety of cellular activities
NCODAFGM_01947 3.5e-282 pipD E Dipeptidase
NCODAFGM_01948 1.9e-158 endA F DNA RNA non-specific endonuclease
NCODAFGM_01949 1.2e-180 dnaQ 2.7.7.7 L EXOIII
NCODAFGM_01950 9e-158 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
NCODAFGM_01951 3e-116 yviA S Protein of unknown function (DUF421)
NCODAFGM_01952 1.1e-72 S Protein of unknown function (DUF3290)
NCODAFGM_01953 9e-141 pnuC H nicotinamide mononucleotide transporter
NCODAFGM_01954 5.4e-294 arbB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
NCODAFGM_01955 0.0 2.7.1.208, 2.7.1.211 G phosphotransferase system
NCODAFGM_01956 1.9e-158 bglG2 K CAT RNA binding domain
NCODAFGM_01957 3.4e-35
NCODAFGM_01958 1.8e-136 S PAS domain
NCODAFGM_01959 4.9e-277 V ABC transporter transmembrane region
NCODAFGM_01960 2.1e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
NCODAFGM_01961 1.3e-12 T Transcriptional regulatory protein, C terminal
NCODAFGM_01962 1.1e-95 T Transcriptional regulatory protein, C terminal
NCODAFGM_01963 1.8e-184 T GHKL domain
NCODAFGM_01964 3.4e-76 S Peptidase propeptide and YPEB domain
NCODAFGM_01966 4.7e-83 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
NCODAFGM_01967 3.8e-65 yybA 2.3.1.57 K Transcriptional regulator
NCODAFGM_01968 4e-242 V ABC transporter transmembrane region
NCODAFGM_01969 4.6e-311 oppA3 E ABC transporter, substratebinding protein
NCODAFGM_01971 4.6e-62 ypaA S Protein of unknown function (DUF1304)
NCODAFGM_01972 1.9e-242 L transposase, IS605 OrfB family
NCODAFGM_01973 8.8e-58 S Peptidase propeptide and YPEB domain
NCODAFGM_01974 4.4e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
NCODAFGM_01975 2.1e-171 coaA 2.7.1.33 F Pantothenic acid kinase
NCODAFGM_01976 1.9e-98 E GDSL-like Lipase/Acylhydrolase
NCODAFGM_01977 7.5e-74 yjcF S Acetyltransferase (GNAT) domain
NCODAFGM_01978 1.6e-143 aatB ET ABC transporter substrate-binding protein
NCODAFGM_01979 4.6e-106 glnQ 3.6.3.21 E ABC transporter
NCODAFGM_01980 1.5e-107 glnP P ABC transporter permease
NCODAFGM_01981 0.0 helD 3.6.4.12 L DNA helicase
NCODAFGM_01982 1.7e-123 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
NCODAFGM_01983 1.4e-126 pgm3 G Phosphoglycerate mutase family
NCODAFGM_01984 1.2e-241 S response to antibiotic
NCODAFGM_01985 5.4e-124
NCODAFGM_01986 0.0 3.6.3.8 P P-type ATPase
NCODAFGM_01987 4.3e-65 2.7.1.191 G PTS system fructose IIA component
NCODAFGM_01988 3.1e-41
NCODAFGM_01989 7.7e-09
NCODAFGM_01990 1.5e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
NCODAFGM_01991 3.5e-135 glvR K Helix-turn-helix domain, rpiR family
NCODAFGM_01992 1e-267 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
NCODAFGM_01993 1.4e-150
NCODAFGM_01994 8.6e-24
NCODAFGM_01995 2.3e-93 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
NCODAFGM_01996 9.4e-106 3.2.2.20 K acetyltransferase
NCODAFGM_01998 5e-122 4.2.1.6 M Mandelate racemase muconate lactonizing enzyme
NCODAFGM_01999 1.7e-118 P Citrate transporter
NCODAFGM_02000 6.1e-25 K Transcriptional regulator, LysR
NCODAFGM_02001 2.4e-136 5.5.1.2 F Adenylosuccinate lyase C-terminus
NCODAFGM_02002 3.7e-114 1.3.5.4 C FAD binding domain
NCODAFGM_02003 0.0 O Belongs to the peptidase S8 family
NCODAFGM_02004 4.9e-52
NCODAFGM_02005 5.7e-62
NCODAFGM_02006 7.8e-14 S protein encoded in hypervariable junctions of pilus gene clusters
NCODAFGM_02007 1.3e-24
NCODAFGM_02008 4.3e-87 V Abi-like protein
NCODAFGM_02009 1.4e-12
NCODAFGM_02010 1.9e-43
NCODAFGM_02011 8.5e-31
NCODAFGM_02012 2.6e-180 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
NCODAFGM_02013 2.4e-115 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
NCODAFGM_02014 8.7e-167 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
NCODAFGM_02015 7e-208 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
NCODAFGM_02016 3.4e-222 KQ helix_turn_helix, mercury resistance
NCODAFGM_02017 1.1e-52
NCODAFGM_02018 2e-42 S RelB antitoxin
NCODAFGM_02019 0.0 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
NCODAFGM_02022 1.6e-77 2.7.1.191 G PTS system sorbose subfamily IIB component
NCODAFGM_02023 5.2e-53 2.7.1.191 G PTS system fructose IIA component
NCODAFGM_02024 1.4e-269 G PTS system mannose/fructose/sorbose family IID component
NCODAFGM_02025 4.5e-113 tal 2.2.1.2 H Transaldolase/Fructose-6-phosphate aldolase
NCODAFGM_02026 6.9e-136 K helix_turn _helix lactose operon repressor
NCODAFGM_02027 3.9e-58
NCODAFGM_02028 2.7e-74 L Transposase
NCODAFGM_02029 3e-63 prrC S Protein conserved in bacteria
NCODAFGM_02030 9.8e-16 prrC S Protein conserved in bacteria
NCODAFGM_02031 1.2e-144 L Transposase
NCODAFGM_02032 9.8e-202 L Transposase and inactivated derivatives, IS30 family
NCODAFGM_02033 1.7e-50 S Acyltransferase family
NCODAFGM_02034 3.5e-219 L Transposase
NCODAFGM_02035 5.5e-52 S Acyltransferase family
NCODAFGM_02036 1.3e-252 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
NCODAFGM_02037 5.3e-167 S Core-2/I-Branching enzyme
NCODAFGM_02038 1.2e-208 glf 5.4.99.9 M UDP-galactopyranose mutase
NCODAFGM_02039 1.7e-70 S Psort location CytoplasmicMembrane, score 9.99
NCODAFGM_02040 1.7e-170 glfT1 1.1.1.133 S Glycosyltransferase like family 2
NCODAFGM_02041 2.1e-165 M Glycosyl transferases group 1
NCODAFGM_02042 1.8e-140 M Glycosyl transferases group 1
NCODAFGM_02043 2.4e-158 M Glycosyl transferases group 1
NCODAFGM_02044 1e-121 waaB GT4 M Glycosyl transferases group 1
NCODAFGM_02045 9.2e-120 cps1D M Domain of unknown function (DUF4422)
NCODAFGM_02046 1.7e-122 rfbP M Bacterial sugar transferase
NCODAFGM_02047 4.1e-144 ywqE 3.1.3.48 GM PHP domain protein
NCODAFGM_02048 5.8e-122 ywqD 2.7.10.1 D Capsular exopolysaccharide family
NCODAFGM_02049 6.5e-146 epsB M biosynthesis protein
NCODAFGM_02050 1.4e-176 brpA K Cell envelope-like function transcriptional attenuator common domain protein
NCODAFGM_02052 4e-26 S Predicted membrane protein (DUF2335)
NCODAFGM_02055 2.7e-217 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
NCODAFGM_02056 1e-174 S Cysteine-rich secretory protein family
NCODAFGM_02058 3e-40
NCODAFGM_02059 2.6e-118 M NlpC/P60 family
NCODAFGM_02060 1.4e-136 M NlpC P60 family protein
NCODAFGM_02061 1.1e-87 M NlpC/P60 family
NCODAFGM_02062 7.7e-89 gmk2 2.7.4.8 F Guanylate kinase homologues.
NCODAFGM_02063 3.9e-42
NCODAFGM_02064 2.9e-279 S O-antigen ligase like membrane protein
NCODAFGM_02065 3.3e-112
NCODAFGM_02066 2.7e-76 nrdI F NrdI Flavodoxin like
NCODAFGM_02067 8.1e-179 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NCODAFGM_02068 2.5e-68
NCODAFGM_02069 2.4e-112 yvpB S Peptidase_C39 like family
NCODAFGM_02070 1.1e-83 S Threonine/Serine exporter, ThrE
NCODAFGM_02071 1.4e-136 thrE S Putative threonine/serine exporter
NCODAFGM_02072 1.7e-290 S ABC transporter
NCODAFGM_02073 3.6e-61
NCODAFGM_02074 2.7e-89 rimL J Acetyltransferase (GNAT) domain
NCODAFGM_02075 6.5e-125 S Protein of unknown function (DUF554)
NCODAFGM_02076 7.6e-209 brpA K Cell envelope-like function transcriptional attenuator common domain protein
NCODAFGM_02077 0.0 pepF E oligoendopeptidase F
NCODAFGM_02078 2.9e-31
NCODAFGM_02079 1e-69 doc S Prophage maintenance system killer protein
NCODAFGM_02082 4.6e-27 S Enterocin A Immunity
NCODAFGM_02083 1.2e-29 blpT
NCODAFGM_02087 1e-20 S Enterocin A Immunity
NCODAFGM_02089 4.9e-201 L Transposase and inactivated derivatives, IS30 family
NCODAFGM_02090 5.7e-43 2.4.1.33 V HlyD family secretion protein
NCODAFGM_02091 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
NCODAFGM_02092 2.9e-79 K LytTr DNA-binding domain
NCODAFGM_02093 3.2e-78 2.7.13.3 T GHKL domain
NCODAFGM_02095 1.6e-25 K Helix-turn-helix XRE-family like proteins
NCODAFGM_02096 7.5e-11
NCODAFGM_02098 1.3e-215 2.1.1.14 E methionine synthase, vitamin-B12 independent
NCODAFGM_02099 6.1e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
NCODAFGM_02100 4.2e-262 lctP C L-lactate permease
NCODAFGM_02101 5e-129 znuB U ABC 3 transport family
NCODAFGM_02102 1.6e-117 fhuC P ABC transporter
NCODAFGM_02103 1.4e-148 psaA P Belongs to the bacterial solute-binding protein 9 family
NCODAFGM_02104 2.9e-196 S Uncharacterised protein family (UPF0236)
NCODAFGM_02105 5.4e-41 K helix_turn_helix, Arsenical Resistance Operon Repressor
NCODAFGM_02106 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
NCODAFGM_02107 2.2e-168 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
NCODAFGM_02108 5.2e-136 fruR K DeoR C terminal sensor domain
NCODAFGM_02109 1.8e-218 natB CP ABC-2 family transporter protein
NCODAFGM_02110 1.2e-163 natA S ABC transporter, ATP-binding protein
NCODAFGM_02111 9.7e-36
NCODAFGM_02112 1.7e-67
NCODAFGM_02113 1.8e-24
NCODAFGM_02114 8.2e-31 yozG K Transcriptional regulator
NCODAFGM_02115 5.7e-84
NCODAFGM_02116 2.7e-22
NCODAFGM_02120 2.2e-129 blpT
NCODAFGM_02121 1.4e-107 M Transport protein ComB
NCODAFGM_02122 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
NCODAFGM_02123 1.2e-127 K LytTr DNA-binding domain
NCODAFGM_02124 5.8e-138 2.7.13.3 T GHKL domain
NCODAFGM_02125 1.2e-16
NCODAFGM_02126 2.1e-255 S Archaea bacterial proteins of unknown function
NCODAFGM_02127 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
NCODAFGM_02128 7.9e-271 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
NCODAFGM_02129 3e-24
NCODAFGM_02130 9.5e-26
NCODAFGM_02131 2.2e-33
NCODAFGM_02132 2.4e-53 S Enterocin A Immunity
NCODAFGM_02133 8e-145 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
NCODAFGM_02134 5.5e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
NCODAFGM_02135 4.6e-208 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
NCODAFGM_02136 9.6e-121 K response regulator
NCODAFGM_02137 0.0 V ABC transporter
NCODAFGM_02138 2.4e-301 V ABC transporter, ATP-binding protein
NCODAFGM_02139 3.8e-137 XK27_01040 S Protein of unknown function (DUF1129)
NCODAFGM_02140 3.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
NCODAFGM_02141 9.6e-45 yyzM S Bacterial protein of unknown function (DUF951)
NCODAFGM_02142 1.7e-154 spo0J K Belongs to the ParB family
NCODAFGM_02143 3.4e-138 soj D Sporulation initiation inhibitor
NCODAFGM_02144 5e-148 noc K Belongs to the ParB family
NCODAFGM_02145 1e-122 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
NCODAFGM_02146 3e-53 cvpA S Colicin V production protein
NCODAFGM_02147 2.5e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
NCODAFGM_02148 5.6e-149 3.1.3.48 T Tyrosine phosphatase family
NCODAFGM_02149 2e-97 azr 1.5.1.36 S NADPH-dependent FMN reductase
NCODAFGM_02150 6.4e-96 nqr 1.5.1.36 S NADPH-dependent FMN reductase
NCODAFGM_02151 3.7e-111 K WHG domain
NCODAFGM_02152 8e-38
NCODAFGM_02153 3.4e-274 pipD E Dipeptidase
NCODAFGM_02154 2e-155 metB 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
NCODAFGM_02155 3.4e-155 metC1 4.4.1.8 E cystathionine
NCODAFGM_02156 2.6e-99 metQ1 P Belongs to the nlpA lipoprotein family
NCODAFGM_02157 1.5e-102 devA 3.6.3.25 V ABC transporter, ATP-binding protein
NCODAFGM_02158 2.8e-175 hrtB V ABC transporter permease
NCODAFGM_02159 2.7e-91 ygfC K Bacterial regulatory proteins, tetR family
NCODAFGM_02160 3.5e-111 G phosphoglycerate mutase
NCODAFGM_02161 4.1e-141 aroD S Alpha/beta hydrolase family
NCODAFGM_02162 2.2e-142 S Belongs to the UPF0246 family
NCODAFGM_02163 2.6e-120
NCODAFGM_02164 4.3e-157 2.7.7.12 C Domain of unknown function (DUF4931)
NCODAFGM_02165 2.2e-189 S Putative peptidoglycan binding domain
NCODAFGM_02166 4e-16
NCODAFGM_02167 1.8e-91 liaI S membrane
NCODAFGM_02168 1.7e-70 XK27_02470 K LytTr DNA-binding domain
NCODAFGM_02169 7.3e-19 S Sugar efflux transporter for intercellular exchange
NCODAFGM_02170 3.7e-250 dtpT U amino acid peptide transporter
NCODAFGM_02171 0.0 pepN 3.4.11.2 E aminopeptidase
NCODAFGM_02172 2.8e-47 lysM M LysM domain
NCODAFGM_02173 1.5e-175
NCODAFGM_02174 6.2e-211 mdtG EGP Major facilitator Superfamily
NCODAFGM_02175 1.8e-90 ymdB S Macro domain protein
NCODAFGM_02176 1e-218 L Transposase
NCODAFGM_02177 9.3e-84 K Helix-turn-helix XRE-family like proteins
NCODAFGM_02178 3.3e-147 malG P ABC transporter permease
NCODAFGM_02179 1.1e-250 malF P Binding-protein-dependent transport system inner membrane component
NCODAFGM_02180 1.3e-213 malE G Bacterial extracellular solute-binding protein
NCODAFGM_02181 1.8e-209 msmX P Belongs to the ABC transporter superfamily
NCODAFGM_02182 1.4e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
NCODAFGM_02183 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
NCODAFGM_02184 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
NCODAFGM_02185 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
NCODAFGM_02186 5.9e-76 S PAS domain
NCODAFGM_02187 9.7e-214 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
NCODAFGM_02188 1.1e-178 yvdE K helix_turn _helix lactose operon repressor
NCODAFGM_02189 6.3e-145 ptp2 3.1.3.48 T Tyrosine phosphatase family
NCODAFGM_02190 3.5e-293 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
NCODAFGM_02191 9.6e-152 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
NCODAFGM_02192 5.9e-89
NCODAFGM_02193 5.6e-20
NCODAFGM_02194 1.2e-138 K Helix-turn-helix XRE-family like proteins
NCODAFGM_02195 5.9e-47 yoeB S YoeB-like toxin of bacterial type II toxin-antitoxin system
NCODAFGM_02196 6.5e-44 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
NCODAFGM_02197 1.5e-68 L RelB antitoxin
NCODAFGM_02199 2.7e-131 cobQ S glutamine amidotransferase
NCODAFGM_02200 1.8e-81 M NlpC/P60 family
NCODAFGM_02203 9.6e-158
NCODAFGM_02204 8.2e-34
NCODAFGM_02205 7.3e-164 EG EamA-like transporter family
NCODAFGM_02206 5.6e-164 EG EamA-like transporter family
NCODAFGM_02207 7.5e-80 yicL EG EamA-like transporter family
NCODAFGM_02208 1.5e-60 yicL EG EamA-like transporter family
NCODAFGM_02209 2.5e-107
NCODAFGM_02210 1.8e-110
NCODAFGM_02211 1.7e-185 XK27_05540 S DUF218 domain
NCODAFGM_02212 2.7e-263 yheS_2 S ATPases associated with a variety of cellular activities
NCODAFGM_02213 5e-87
NCODAFGM_02214 3.9e-57
NCODAFGM_02215 4.7e-25 S Protein conserved in bacteria
NCODAFGM_02216 1.3e-54 S protein encoded in hypervariable junctions of pilus gene clusters
NCODAFGM_02217 2.8e-36 hicA S HicA toxin of bacterial toxin-antitoxin,
NCODAFGM_02218 2.1e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
NCODAFGM_02219 6.4e-251 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
NCODAFGM_02220 7e-189 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
NCODAFGM_02223 3.9e-206 4.2.1.126 S Bacterial protein of unknown function (DUF871)
NCODAFGM_02224 1.3e-190 asnA 6.3.1.1 F aspartate--ammonia ligase
NCODAFGM_02225 3.9e-230 steT_1 E amino acid
NCODAFGM_02226 3.4e-140 puuD S peptidase C26
NCODAFGM_02227 8.9e-177 S PFAM Archaeal ATPase
NCODAFGM_02228 9.5e-245 yifK E Amino acid permease
NCODAFGM_02229 1.4e-232 cycA E Amino acid permease
NCODAFGM_02230 4.3e-115 lepB 3.4.21.89 U Belongs to the peptidase S26 family
NCODAFGM_02231 0.0 clpE O AAA domain (Cdc48 subfamily)
NCODAFGM_02232 2.6e-166 S Alpha/beta hydrolase of unknown function (DUF915)
NCODAFGM_02233 2.6e-239 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
NCODAFGM_02234 2.8e-123 XK27_06785 V ABC transporter, ATP-binding protein
NCODAFGM_02235 0.0 XK27_06780 V ABC transporter permease
NCODAFGM_02236 1.9e-36
NCODAFGM_02237 3.5e-291 ytgP S Polysaccharide biosynthesis protein
NCODAFGM_02238 2.7e-137 lysA2 M Glycosyl hydrolases family 25
NCODAFGM_02239 2.3e-133 S Protein of unknown function (DUF975)
NCODAFGM_02240 7.6e-177 pbpX2 V Beta-lactamase
NCODAFGM_02241 1.5e-247 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
NCODAFGM_02242 1.7e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
NCODAFGM_02243 6e-238 dltB M MBOAT, membrane-bound O-acyltransferase family
NCODAFGM_02244 2.1e-285 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
NCODAFGM_02245 5.2e-19 S D-Ala-teichoic acid biosynthesis protein
NCODAFGM_02246 4.1e-44
NCODAFGM_02247 1e-207 ywhK S Membrane
NCODAFGM_02248 3.9e-81 ykuL S (CBS) domain
NCODAFGM_02249 0.0 cadA P P-type ATPase
NCODAFGM_02250 5.7e-62
NCODAFGM_02251 2.8e-205 napA P Sodium/hydrogen exchanger family
NCODAFGM_02252 1.9e-47 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
NCODAFGM_02253 1e-41 S YoeB-like toxin of bacterial type II toxin-antitoxin system
NCODAFGM_02254 5.3e-276 V ABC transporter transmembrane region
NCODAFGM_02255 8.8e-156 mutR K Helix-turn-helix XRE-family like proteins
NCODAFGM_02256 5.4e-51
NCODAFGM_02257 4.2e-154 EGP Major facilitator Superfamily
NCODAFGM_02258 1.8e-111 ropB K Transcriptional regulator
NCODAFGM_02259 8.3e-122 S CAAX protease self-immunity
NCODAFGM_02260 1.6e-194 S DUF218 domain
NCODAFGM_02261 0.0 macB_3 V ABC transporter, ATP-binding protein
NCODAFGM_02262 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
NCODAFGM_02263 4.4e-101 S ECF transporter, substrate-specific component
NCODAFGM_02264 4.7e-202 tcsA S ABC transporter substrate-binding protein PnrA-like
NCODAFGM_02265 1.5e-200 tcsA S ABC transporter substrate-binding protein PnrA-like
NCODAFGM_02266 3.7e-282 xylG 3.6.3.17 S ABC transporter
NCODAFGM_02267 1.6e-197 yufP S Belongs to the binding-protein-dependent transport system permease family
NCODAFGM_02268 4.4e-172 yufQ S Belongs to the binding-protein-dependent transport system permease family
NCODAFGM_02269 4.3e-160 yeaE S Aldo/keto reductase family
NCODAFGM_02270 2.1e-134 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
NCODAFGM_02271 8.5e-119 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
NCODAFGM_02272 9.3e-124 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
NCODAFGM_02273 9.4e-72
NCODAFGM_02274 3.7e-140 cof S haloacid dehalogenase-like hydrolase
NCODAFGM_02275 8.2e-230 pbuG S permease
NCODAFGM_02276 1.5e-33 S CAAX protease self-immunity
NCODAFGM_02277 8e-126 K helix_turn_helix, mercury resistance
NCODAFGM_02278 8.2e-230 pbuG S permease
NCODAFGM_02279 2.5e-40 relB L Addiction module antitoxin, RelB DinJ family
NCODAFGM_02280 4.1e-16 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
NCODAFGM_02281 1.7e-38 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
NCODAFGM_02282 6.1e-61 K Transcriptional regulator
NCODAFGM_02283 5.3e-226 S cog cog1373
NCODAFGM_02284 2e-146 S haloacid dehalogenase-like hydrolase
NCODAFGM_02285 1.6e-225 pbuG S permease
NCODAFGM_02286 3.3e-56 K Helix-turn-helix domain
NCODAFGM_02287 1.6e-73 S Putative adhesin
NCODAFGM_02288 2.1e-73 atkY K Penicillinase repressor
NCODAFGM_02289 1.3e-63 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
NCODAFGM_02290 1.7e-47 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
NCODAFGM_02291 0.0 copA 3.6.3.54 P P-type ATPase
NCODAFGM_02292 8.2e-114 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
NCODAFGM_02293 1.2e-105
NCODAFGM_02294 3.5e-247 EGP Sugar (and other) transporter
NCODAFGM_02295 1.2e-18
NCODAFGM_02296 5.6e-211
NCODAFGM_02297 1.2e-136 S SLAP domain
NCODAFGM_02298 1.6e-285 clcA P chloride
NCODAFGM_02299 7.6e-274 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
NCODAFGM_02300 1e-15
NCODAFGM_02301 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
NCODAFGM_02302 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
NCODAFGM_02303 2.1e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
NCODAFGM_02304 8.4e-146 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
NCODAFGM_02305 3.5e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
NCODAFGM_02306 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
NCODAFGM_02307 5.5e-245 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
NCODAFGM_02308 3.1e-185 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
NCODAFGM_02309 2.6e-35 yaaA S S4 domain protein YaaA
NCODAFGM_02310 1.1e-209 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
NCODAFGM_02311 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NCODAFGM_02312 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
NCODAFGM_02313 5.5e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
NCODAFGM_02314 4.5e-78 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
NCODAFGM_02315 2.8e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
NCODAFGM_02316 1.4e-91 E Zn peptidase
NCODAFGM_02317 6e-41 ps115 K Helix-turn-helix XRE-family like proteins
NCODAFGM_02318 3.2e-42
NCODAFGM_02319 1.9e-170 S Bacteriocin helveticin-J
NCODAFGM_02320 1.8e-201 S SLAP domain
NCODAFGM_02321 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
NCODAFGM_02322 5.7e-69 rplI J Binds to the 23S rRNA
NCODAFGM_02323 6.7e-254 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
NCODAFGM_02324 6e-166 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
NCODAFGM_02325 5.2e-162 degV S DegV family
NCODAFGM_02326 8.4e-136 V ABC transporter transmembrane region
NCODAFGM_02327 1.3e-167 scrK 2.7.1.2, 2.7.1.4 GK ROK family
NCODAFGM_02329 3.5e-15 S Transglycosylase associated protein
NCODAFGM_02330 1.5e-190 L Transposase
NCODAFGM_02331 1.7e-85 L Transposase
NCODAFGM_02332 4.7e-193 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NCODAFGM_02333 2.1e-73 nrdI F NrdI Flavodoxin like
NCODAFGM_02334 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
NCODAFGM_02335 6.3e-232 I Protein of unknown function (DUF2974)
NCODAFGM_02336 9.2e-119 yhiD S MgtC family
NCODAFGM_02338 3.1e-22 S SLAP domain
NCODAFGM_02339 1.1e-24 S SLAP domain
NCODAFGM_02340 8.8e-29
NCODAFGM_02343 4.9e-111 K Helix-turn-helix XRE-family like proteins
NCODAFGM_02344 1.5e-75 K Helix-turn-helix domain
NCODAFGM_02346 1.6e-54 S CAAX protease self-immunity
NCODAFGM_02347 2.9e-25 WQ51_00220 K Helix-turn-helix XRE-family like proteins
NCODAFGM_02349 4.4e-73 ybaT E Amino acid permease
NCODAFGM_02350 3.9e-07 S LPXTG cell wall anchor motif
NCODAFGM_02351 1.5e-146 S Putative ABC-transporter type IV
NCODAFGM_02352 4.4e-79 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S cob(I)alamin adenosyltransferase
NCODAFGM_02353 1.2e-16 L Helix-turn-helix domain
NCODAFGM_02357 7e-14 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
NCODAFGM_02362 1.3e-25 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
NCODAFGM_02363 2.1e-265 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
NCODAFGM_02364 8.7e-49 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
NCODAFGM_02365 2.2e-65 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
NCODAFGM_02366 1.3e-242 oppA E ABC transporter substrate-binding protein
NCODAFGM_02367 1.3e-58 oppA E ABC transporter substrate-binding protein
NCODAFGM_02368 6.4e-177 K AI-2E family transporter
NCODAFGM_02369 2.6e-103 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
NCODAFGM_02370 1.2e-227 G Major Facilitator
NCODAFGM_02371 3.2e-43 XK27_08845 S ABC transporter, ATP-binding protein
NCODAFGM_02372 5.7e-83 XK27_08845 S ABC transporter, ATP-binding protein
NCODAFGM_02373 2.1e-72 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
NCODAFGM_02374 6.3e-17 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
NCODAFGM_02375 1.6e-55 ABC-SBP S ABC transporter
NCODAFGM_02376 8.5e-78 ABC-SBP S ABC transporter
NCODAFGM_02377 1.7e-89 V ABC-type multidrug transport system, ATPase and permease components
NCODAFGM_02378 1.3e-41 V ABC-type multidrug transport system, ATPase and permease components
NCODAFGM_02379 2.9e-25 ropB K Helix-turn-helix domain
NCODAFGM_02380 2.8e-15 ropB K Helix-turn-helix domain
NCODAFGM_02381 2.2e-29
NCODAFGM_02382 1.6e-34
NCODAFGM_02383 3.1e-154 2.7.1.176 S Zeta toxin
NCODAFGM_02384 6.7e-41 S Bacterial epsilon antitoxin
NCODAFGM_02385 6.4e-167 repA S Replication initiator protein A
NCODAFGM_02386 3.3e-40
NCODAFGM_02387 2.1e-191 NU StbA protein
NCODAFGM_02388 2.2e-117
NCODAFGM_02389 3e-37 traA L MobA MobL family protein
NCODAFGM_02390 1.5e-95 K Bacterial regulatory proteins, tetR family
NCODAFGM_02391 8.8e-122 V ABC transporter, ATP-binding protein
NCODAFGM_02392 1.1e-282 V ABC transporter permease
NCODAFGM_02393 6.7e-53 S YoeB-like toxin of bacterial type II toxin-antitoxin system
NCODAFGM_02394 1.2e-39 S Antitoxin component of a toxin-antitoxin (TA) module
NCODAFGM_02395 1.9e-40 S RelB antitoxin
NCODAFGM_02396 1.6e-66
NCODAFGM_02397 1.8e-125 yvfS V ABC-2 type transporter
NCODAFGM_02398 1.2e-166 XK27_09825 V ABC transporter
NCODAFGM_02400 5.6e-14
NCODAFGM_02401 2e-52 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
NCODAFGM_02402 3.1e-39 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
NCODAFGM_02403 2.1e-130 polC 2.4.1.129, 2.7.7.7, 3.4.16.4 GT51 L Psort location Cytoplasmic, score
NCODAFGM_02404 9.7e-13
NCODAFGM_02405 6.8e-306 traI 5.99.1.2 L C-terminal repeat of topoisomerase
NCODAFGM_02406 4e-23
NCODAFGM_02407 4.5e-75
NCODAFGM_02408 5.7e-07
NCODAFGM_02409 2.1e-221 traK U TraM recognition site of TraD and TraG
NCODAFGM_02410 3.4e-45
NCODAFGM_02411 3.9e-36 CO COG0526, thiol-disulfide isomerase and thioredoxins
NCODAFGM_02412 3.5e-53
NCODAFGM_02413 6.1e-144 M CHAP domain
NCODAFGM_02414 3.8e-140 polC 2.4.1.129, 2.7.7.7, 3.4.16.4 GT51 S WXG100 protein secretion system (Wss), protein YukC
NCODAFGM_02415 0.0 traE U AAA-like domain
NCODAFGM_02416 6.2e-117
NCODAFGM_02417 3.7e-47
NCODAFGM_02418 1.3e-49 S Cag pathogenicity island, type IV secretory system
NCODAFGM_02419 1e-95
NCODAFGM_02420 3.4e-32
NCODAFGM_02421 0.0 L MobA MobL family protein

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)