ORF_ID e_value Gene_name EC_number CAZy COGs Description
GIFBOPMH_00001 1.5e-247 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
GIFBOPMH_00002 1.1e-203 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
GIFBOPMH_00003 3.9e-19 yaaA S S4 domain
GIFBOPMH_00004 3e-204 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
GIFBOPMH_00005 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GIFBOPMH_00006 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
GIFBOPMH_00007 9.4e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
GIFBOPMH_00008 1.7e-82 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
GIFBOPMH_00009 2.1e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
GIFBOPMH_00010 3.4e-113 corA P CorA-like Mg2+ transporter protein
GIFBOPMH_00011 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
GIFBOPMH_00012 2.4e-75 rplI J Binds to the 23S rRNA
GIFBOPMH_00013 3.3e-245 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
GIFBOPMH_00014 1.8e-167 scrK 2.7.1.2, 2.7.1.4 GK ROK family
GIFBOPMH_00015 8.5e-215 I Protein of unknown function (DUF2974)
GIFBOPMH_00016 0.0
GIFBOPMH_00017 3.6e-115 yhiD S MgtC family
GIFBOPMH_00019 1.2e-109 gph 3.1.3.18 S HAD hydrolase, family IA, variant
GIFBOPMH_00020 7.1e-29 WQ51_00220 K Helix-turn-helix XRE-family like proteins
GIFBOPMH_00021 5.1e-66 S Protein of unknown function (DUF3278)
GIFBOPMH_00022 1.2e-174 S Aldo keto reductase
GIFBOPMH_00024 3.2e-201 S Sterol carrier protein domain
GIFBOPMH_00025 2.4e-113 ywnB S NAD(P)H-binding
GIFBOPMH_00026 1.9e-74 S Protein of unknown function (DUF975)
GIFBOPMH_00027 2.4e-43 S Protein of unknown function (DUF975)
GIFBOPMH_00028 1.1e-135 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GIFBOPMH_00029 3.2e-150 yitS S EDD domain protein, DegV family
GIFBOPMH_00030 3.5e-17
GIFBOPMH_00031 1.7e-144 V ABC transporter transmembrane region
GIFBOPMH_00032 8.3e-306 KLT Protein kinase domain
GIFBOPMH_00034 0.0 tetP J elongation factor G
GIFBOPMH_00035 2.4e-159 P CorA-like Mg2+ transporter protein
GIFBOPMH_00037 2.5e-40 S Transglycosylase associated protein
GIFBOPMH_00038 1.5e-157 xth 3.1.11.2 L exodeoxyribonuclease III
GIFBOPMH_00039 0.0 L Helicase C-terminal domain protein
GIFBOPMH_00040 9.4e-153 S Alpha beta hydrolase
GIFBOPMH_00041 1.2e-39
GIFBOPMH_00042 1.7e-164 K AI-2E family transporter
GIFBOPMH_00043 1.5e-231 gor 1.8.1.7 C pyridine nucleotide-disulfide oxidoreductase
GIFBOPMH_00044 7.6e-211 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GIFBOPMH_00045 1.5e-98 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
GIFBOPMH_00046 1.8e-192 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
GIFBOPMH_00047 0.0 S domain, Protein
GIFBOPMH_00048 1.3e-257 E amino acid
GIFBOPMH_00049 1.4e-167 K LysR substrate binding domain
GIFBOPMH_00050 0.0 1.3.5.4 C FAD binding domain
GIFBOPMH_00051 3.8e-238 brnQ U Component of the transport system for branched-chain amino acids
GIFBOPMH_00052 5.5e-127 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
GIFBOPMH_00053 3.3e-177 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
GIFBOPMH_00054 1.7e-84 S Peptidase propeptide and YPEB domain
GIFBOPMH_00055 3.4e-185 cbh 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
GIFBOPMH_00056 9.1e-248 yhjX_2 P Major Facilitator Superfamily
GIFBOPMH_00057 1e-235 yhjX_2 P Major Facilitator Superfamily
GIFBOPMH_00058 5.9e-160 arbZ I Phosphate acyltransferases
GIFBOPMH_00059 4.2e-175 arbY M Glycosyl transferase family 8
GIFBOPMH_00060 5.7e-180 arbY M Glycosyl transferase family 8
GIFBOPMH_00061 1.1e-152 arbx M Glycosyl transferase family 8
GIFBOPMH_00062 9.5e-141 arbV 2.3.1.51 I Acyl-transferase
GIFBOPMH_00065 2e-129 K response regulator
GIFBOPMH_00066 0.0 vicK 2.7.13.3 T Histidine kinase
GIFBOPMH_00067 3.4e-239 yycH S YycH protein
GIFBOPMH_00068 9.4e-139 yycI S YycH protein
GIFBOPMH_00069 9.1e-147 vicX 3.1.26.11 S domain protein
GIFBOPMH_00070 1.2e-182 htrA 3.4.21.107 O serine protease
GIFBOPMH_00071 1.4e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
GIFBOPMH_00072 1.8e-100 P Cobalt transport protein
GIFBOPMH_00073 7.7e-231 cbiO1 S ABC transporter, ATP-binding protein
GIFBOPMH_00074 3.4e-92 S ABC-type cobalt transport system, permease component
GIFBOPMH_00075 1.7e-160 K helix_turn_helix, arabinose operon control protein
GIFBOPMH_00076 1.1e-145 htpX O Belongs to the peptidase M48B family
GIFBOPMH_00077 1.1e-90 lemA S LemA family
GIFBOPMH_00078 2.4e-91 ybiR P Citrate transporter
GIFBOPMH_00079 8.7e-68 ybiR P Citrate transporter
GIFBOPMH_00080 4.8e-67 S Iron-sulphur cluster biosynthesis
GIFBOPMH_00081 1.7e-16
GIFBOPMH_00082 4.5e-124
GIFBOPMH_00084 1.1e-81 ydaM M Glycosyl transferase
GIFBOPMH_00085 1.6e-146 ydaM M Glycosyl transferase
GIFBOPMH_00086 1.6e-197 G Glycosyl hydrolases family 8
GIFBOPMH_00087 4.5e-120 yfbR S HD containing hydrolase-like enzyme
GIFBOPMH_00088 5.4e-167 L HNH nucleases
GIFBOPMH_00089 1.4e-136 glnQ E ABC transporter, ATP-binding protein
GIFBOPMH_00090 4.5e-278 glnP P ABC transporter permease
GIFBOPMH_00091 9.4e-107 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
GIFBOPMH_00092 2.4e-62 yeaO S Protein of unknown function, DUF488
GIFBOPMH_00093 4.2e-88 terC P Integral membrane protein TerC family
GIFBOPMH_00094 2.1e-28 terC P Integral membrane protein TerC family
GIFBOPMH_00095 1.7e-93 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
GIFBOPMH_00096 9.6e-132 cobB K SIR2 family
GIFBOPMH_00097 2e-80
GIFBOPMH_00098 5.1e-270 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GIFBOPMH_00099 1.1e-122 yugP S Putative neutral zinc metallopeptidase
GIFBOPMH_00100 1.9e-172 S Alpha/beta hydrolase of unknown function (DUF915)
GIFBOPMH_00101 7.3e-138 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GIFBOPMH_00102 8.7e-160 ypuA S Protein of unknown function (DUF1002)
GIFBOPMH_00103 1.3e-148 epsV 2.7.8.12 S glycosyl transferase family 2
GIFBOPMH_00104 1.5e-123 S Alpha/beta hydrolase family
GIFBOPMH_00105 9.4e-59
GIFBOPMH_00106 2.7e-180 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GIFBOPMH_00107 5.4e-212 S CAAX protease self-immunity
GIFBOPMH_00108 2.9e-238 cycA E Amino acid permease
GIFBOPMH_00109 3.9e-108 luxT K Bacterial regulatory proteins, tetR family
GIFBOPMH_00110 9e-137
GIFBOPMH_00111 2.9e-274 S Cysteine-rich secretory protein family
GIFBOPMH_00112 4.5e-205 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
GIFBOPMH_00113 1.1e-90
GIFBOPMH_00114 1.4e-268 yjcE P Sodium proton antiporter
GIFBOPMH_00115 6.4e-183 yibE S overlaps another CDS with the same product name
GIFBOPMH_00116 9e-112 yibF S overlaps another CDS with the same product name
GIFBOPMH_00117 8.1e-11 I alpha/beta hydrolase fold
GIFBOPMH_00118 6.9e-130 I alpha/beta hydrolase fold
GIFBOPMH_00119 0.0 G Belongs to the glycosyl hydrolase 31 family
GIFBOPMH_00120 1.8e-125 XK27_08435 K UTRA
GIFBOPMH_00121 9.6e-214 agaS G SIS domain
GIFBOPMH_00122 2e-227 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
GIFBOPMH_00123 4.3e-83 2.7.1.191 G PTS system sorbose subfamily IIB component
GIFBOPMH_00124 2.9e-141 XK27_08455 G PTS system sorbose-specific iic component
GIFBOPMH_00125 2.7e-146 manZ_1 G PTS system mannose/fructose/sorbose family IID component
GIFBOPMH_00126 9.3e-68 2.7.1.191 G PTS system fructose IIA component
GIFBOPMH_00127 4.1e-17 S PD-(D/E)XK nuclease family transposase
GIFBOPMH_00128 2.3e-16 S zinc-ribbon domain
GIFBOPMH_00129 3.4e-140 S zinc-ribbon domain
GIFBOPMH_00130 1.6e-164
GIFBOPMH_00131 6.3e-87 ntd 2.4.2.6 F Nucleoside
GIFBOPMH_00132 6e-97 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GIFBOPMH_00133 2e-121 XK27_08440 K UTRA domain
GIFBOPMH_00134 5.7e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
GIFBOPMH_00135 9.4e-86 uspA T universal stress protein
GIFBOPMH_00137 8.3e-168 phnD P Phosphonate ABC transporter
GIFBOPMH_00138 1.8e-139 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
GIFBOPMH_00139 1.6e-130 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
GIFBOPMH_00140 9.2e-147 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
GIFBOPMH_00141 7.3e-83
GIFBOPMH_00142 3.4e-274 S Calcineurin-like phosphoesterase
GIFBOPMH_00143 0.0 asnB 6.3.5.4 E Asparagine synthase
GIFBOPMH_00144 6.1e-265 yxbA 6.3.1.12 S ATP-grasp enzyme
GIFBOPMH_00145 2.8e-64
GIFBOPMH_00146 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
GIFBOPMH_00147 6.9e-138 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
GIFBOPMH_00148 2.7e-103 S Iron-sulfur cluster assembly protein
GIFBOPMH_00149 7.8e-219 XK27_04775 S PAS domain
GIFBOPMH_00150 1.4e-16 UW LPXTG-motif cell wall anchor domain protein
GIFBOPMH_00151 0.0 UW LPXTG-motif cell wall anchor domain protein
GIFBOPMH_00152 1e-187 yttB EGP Major facilitator Superfamily
GIFBOPMH_00153 7.2e-186 yihT 4.1.2.40, 4.1.2.57 G Belongs to the aldolase LacD family
GIFBOPMH_00154 1.7e-150 D nuclear chromosome segregation
GIFBOPMH_00155 6.4e-134 rpl K Helix-turn-helix domain, rpiR family
GIFBOPMH_00156 1.1e-159 pfkB 2.7.1.11, 2.7.1.56 H pfkB family carbohydrate kinase
GIFBOPMH_00157 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GIFBOPMH_00158 0.0 pepO 3.4.24.71 O Peptidase family M13
GIFBOPMH_00159 6.3e-200 P ABC transporter
GIFBOPMH_00160 3.2e-220 V ABC-type multidrug transport system, ATPase and permease components
GIFBOPMH_00161 0.0 S Bacterial membrane protein, YfhO
GIFBOPMH_00162 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
GIFBOPMH_00163 0.0 kup P Transport of potassium into the cell
GIFBOPMH_00164 0.0 kup P Transport of potassium into the cell
GIFBOPMH_00165 8.6e-72
GIFBOPMH_00166 4.9e-100
GIFBOPMH_00167 9.4e-27
GIFBOPMH_00168 1.4e-34 S Protein of unknown function (DUF2922)
GIFBOPMH_00169 5.5e-227 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
GIFBOPMH_00170 2.7e-231 lysA2 M Glycosyl hydrolases family 25
GIFBOPMH_00171 2.5e-144 fruK 2.7.1.11, 2.7.1.56 G pfkB family carbohydrate kinase
GIFBOPMH_00172 0.0 yjbQ P TrkA C-terminal domain protein
GIFBOPMH_00173 4.3e-167 S Oxidoreductase family, NAD-binding Rossmann fold
GIFBOPMH_00174 4e-123
GIFBOPMH_00175 3.8e-140
GIFBOPMH_00176 4.2e-74 S PAS domain
GIFBOPMH_00177 3.8e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GIFBOPMH_00178 7.8e-58 V Abi-like protein
GIFBOPMH_00179 9.7e-42 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GIFBOPMH_00180 2.4e-69 2.4.1.83 GT2 S GtrA-like protein
GIFBOPMH_00181 3.1e-178 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
GIFBOPMH_00182 9.7e-116
GIFBOPMH_00183 5.6e-150 glcU U sugar transport
GIFBOPMH_00184 3.7e-165 yqhA G Aldose 1-epimerase
GIFBOPMH_00185 1.1e-190 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GIFBOPMH_00186 1.4e-110 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
GIFBOPMH_00187 0.0 XK27_08315 M Sulfatase
GIFBOPMH_00188 7.7e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
GIFBOPMH_00190 5.2e-248 pepC 3.4.22.40 E aminopeptidase
GIFBOPMH_00191 1.2e-117 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
GIFBOPMH_00192 8.5e-42 ps301 K sequence-specific DNA binding
GIFBOPMH_00193 8.2e-254 pepC 3.4.22.40 E aminopeptidase
GIFBOPMH_00194 1.3e-28
GIFBOPMH_00195 5.7e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GIFBOPMH_00196 3.3e-77 hsp O Belongs to the small heat shock protein (HSP20) family
GIFBOPMH_00197 1.3e-292 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GIFBOPMH_00198 2e-80
GIFBOPMH_00199 1.2e-247 celD 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GIFBOPMH_00200 1.2e-18 yydK K UTRA
GIFBOPMH_00201 4.1e-95 yydK K UTRA
GIFBOPMH_00202 2.3e-61 S Domain of unknown function (DUF3284)
GIFBOPMH_00203 9.2e-302 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GIFBOPMH_00204 5.9e-129 gmuR K UTRA
GIFBOPMH_00205 8.5e-51 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
GIFBOPMH_00206 2.8e-38
GIFBOPMH_00207 3.4e-52 ptcB 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
GIFBOPMH_00208 9.2e-267 pts23C 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GIFBOPMH_00209 1.2e-274 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GIFBOPMH_00210 1.8e-148 ypbG 2.7.1.2 GK ROK family
GIFBOPMH_00211 5.3e-108
GIFBOPMH_00213 2.2e-108 E Belongs to the SOS response-associated peptidase family
GIFBOPMH_00214 1.4e-192 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
GIFBOPMH_00215 4.3e-91 comEB 3.5.4.12 F MafB19-like deaminase
GIFBOPMH_00216 3.7e-97 S TPM domain
GIFBOPMH_00217 7.2e-93 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
GIFBOPMH_00218 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
GIFBOPMH_00219 2.2e-142 tatD L hydrolase, TatD family
GIFBOPMH_00220 3.6e-97 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
GIFBOPMH_00221 3.6e-152 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
GIFBOPMH_00222 7.4e-36 veg S Biofilm formation stimulator VEG
GIFBOPMH_00223 1.7e-151 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
GIFBOPMH_00224 3.1e-211 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
GIFBOPMH_00225 1.4e-173 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
GIFBOPMH_00226 1.1e-175 yvdE K helix_turn _helix lactose operon repressor
GIFBOPMH_00227 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
GIFBOPMH_00228 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
GIFBOPMH_00229 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
GIFBOPMH_00230 1.2e-112 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
GIFBOPMH_00231 1e-209 msmX P Belongs to the ABC transporter superfamily
GIFBOPMH_00232 5e-229 malE G Bacterial extracellular solute-binding protein
GIFBOPMH_00233 4.6e-252 malF P Binding-protein-dependent transport system inner membrane component
GIFBOPMH_00234 1.3e-154 malG P ABC transporter permease
GIFBOPMH_00235 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
GIFBOPMH_00236 3.7e-265 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
GIFBOPMH_00237 1.9e-71 S Domain of unknown function (DUF1934)
GIFBOPMH_00238 1.3e-64 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
GIFBOPMH_00239 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
GIFBOPMH_00240 2.1e-238 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
GIFBOPMH_00241 2e-231 pbuX F xanthine permease
GIFBOPMH_00242 6.4e-102 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
GIFBOPMH_00243 6.3e-127 K DNA-binding helix-turn-helix protein
GIFBOPMH_00244 4.7e-301 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
GIFBOPMH_00245 7.5e-130 K Helix-turn-helix
GIFBOPMH_00246 2.9e-09
GIFBOPMH_00249 3.7e-49 hxlR K Transcriptional regulator, HxlR family
GIFBOPMH_00250 6.3e-161 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
GIFBOPMH_00252 2.2e-34
GIFBOPMH_00253 4.2e-79 2.5.1.74 H UbiA prenyltransferase family
GIFBOPMH_00254 4.1e-84 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
GIFBOPMH_00255 2.6e-94
GIFBOPMH_00256 3.4e-271 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
GIFBOPMH_00257 0.0 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
GIFBOPMH_00258 4.3e-185 yfdV S Membrane transport protein
GIFBOPMH_00259 1.2e-34
GIFBOPMH_00260 4.5e-220 eno2 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GIFBOPMH_00261 5.4e-50 S Putative adhesin
GIFBOPMH_00262 1.3e-68
GIFBOPMH_00264 2.4e-275 pipD E Dipeptidase
GIFBOPMH_00265 2.8e-227 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
GIFBOPMH_00266 1.2e-169 rafA 3.2.1.22 G alpha-galactosidase
GIFBOPMH_00267 1.7e-226 rafA 3.2.1.22 G alpha-galactosidase
GIFBOPMH_00268 2e-175 ABC-SBP S ABC transporter
GIFBOPMH_00269 1.7e-138 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
GIFBOPMH_00270 3.9e-131 XK27_08845 S ABC transporter, ATP-binding protein
GIFBOPMH_00271 7.1e-284 ybeC E amino acid
GIFBOPMH_00272 8e-41 rpmE2 J Ribosomal protein L31
GIFBOPMH_00273 2.7e-260 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
GIFBOPMH_00274 2.5e-259 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
GIFBOPMH_00275 1.9e-59 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
GIFBOPMH_00276 1.2e-213 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
GIFBOPMH_00277 2.4e-124 S (CBS) domain
GIFBOPMH_00278 8.1e-182 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
GIFBOPMH_00279 4.3e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
GIFBOPMH_00280 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
GIFBOPMH_00281 3.2e-34 yabO J S4 domain protein
GIFBOPMH_00282 2.3e-60 divIC D Septum formation initiator
GIFBOPMH_00283 2.3e-57 yabR J S1 RNA binding domain
GIFBOPMH_00284 6.2e-230 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
GIFBOPMH_00285 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
GIFBOPMH_00286 0.0 S membrane
GIFBOPMH_00287 3.9e-159 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
GIFBOPMH_00288 2.9e-190 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
GIFBOPMH_00289 7e-297 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
GIFBOPMH_00290 1.6e-08
GIFBOPMH_00292 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
GIFBOPMH_00293 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GIFBOPMH_00294 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GIFBOPMH_00295 3.7e-101 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
GIFBOPMH_00296 3.5e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
GIFBOPMH_00297 1e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
GIFBOPMH_00298 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
GIFBOPMH_00299 5.8e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
GIFBOPMH_00300 1.7e-111 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
GIFBOPMH_00301 3.9e-105 rplD J Forms part of the polypeptide exit tunnel
GIFBOPMH_00302 2.2e-45 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
GIFBOPMH_00303 4.7e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
GIFBOPMH_00304 5e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
GIFBOPMH_00305 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
GIFBOPMH_00306 3.6e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
GIFBOPMH_00307 6.6e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
GIFBOPMH_00308 2.2e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
GIFBOPMH_00309 7.7e-42 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
GIFBOPMH_00310 7.3e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
GIFBOPMH_00311 1.4e-34 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
GIFBOPMH_00312 1.2e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
GIFBOPMH_00313 2.3e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
GIFBOPMH_00314 2.7e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
GIFBOPMH_00315 1.1e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
GIFBOPMH_00316 1.9e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
GIFBOPMH_00317 1.9e-76 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
GIFBOPMH_00318 1.4e-23 rpmD J Ribosomal protein L30
GIFBOPMH_00319 1.3e-70 rplO J Binds to the 23S rRNA
GIFBOPMH_00320 5.8e-236 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
GIFBOPMH_00321 2.7e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
GIFBOPMH_00322 1.4e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
GIFBOPMH_00323 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
GIFBOPMH_00324 4.6e-55 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
GIFBOPMH_00325 2.6e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
GIFBOPMH_00326 1.6e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
GIFBOPMH_00327 7.4e-62 rplQ J Ribosomal protein L17
GIFBOPMH_00328 3.4e-144 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GIFBOPMH_00329 2.3e-151 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GIFBOPMH_00330 1.2e-138 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
GIFBOPMH_00331 4e-147 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
GIFBOPMH_00332 4.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
GIFBOPMH_00333 1.5e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
GIFBOPMH_00334 5.8e-105 mutF V ABC transporter, ATP-binding protein
GIFBOPMH_00335 8.2e-70 spaE S ABC-2 family transporter protein
GIFBOPMH_00336 1.4e-85 spaG S ABC-2 family transporter protein
GIFBOPMH_00337 3.2e-153 1.6.5.2 GM NmrA-like family
GIFBOPMH_00338 5.5e-109 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
GIFBOPMH_00339 9e-127 pgm3 G Belongs to the phosphoglycerate mutase family
GIFBOPMH_00340 1.7e-51 K Transcriptional regulator, ArsR family
GIFBOPMH_00341 3.8e-154 czcD P cation diffusion facilitator family transporter
GIFBOPMH_00342 1.3e-41
GIFBOPMH_00343 4.6e-25
GIFBOPMH_00344 1.5e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
GIFBOPMH_00345 6.4e-184 S AAA domain
GIFBOPMH_00346 1.6e-249 pepC 3.4.22.40 E Peptidase C1-like family
GIFBOPMH_00347 4e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
GIFBOPMH_00348 7e-256 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
GIFBOPMH_00349 1.2e-288 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
GIFBOPMH_00350 2.2e-265 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
GIFBOPMH_00351 3.9e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
GIFBOPMH_00352 8.6e-139 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GIFBOPMH_00353 2e-147 lacT K PRD domain
GIFBOPMH_00354 3.7e-55 lacF 2.7.1.196, 2.7.1.205, 2.7.1.207 G PTS system, Lactose/Cellobiose specific IIA subunit
GIFBOPMH_00355 4.1e-290 celB 2.7.1.196, 2.7.1.205, 2.7.1.207 G Phosphotransferase system, EIIC
GIFBOPMH_00356 3.1e-283 lacG 3.2.1.85 G Belongs to the glycosyl hydrolase 1 family
GIFBOPMH_00357 4.2e-98 yvrI K sigma factor activity
GIFBOPMH_00358 6.3e-34
GIFBOPMH_00359 2.2e-263 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
GIFBOPMH_00360 2.1e-45 K helix_turn_helix, arabinose operon control protein
GIFBOPMH_00361 4.2e-130 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GIFBOPMH_00362 4.7e-278 bglX 3.2.1.21 GH3 G hydrolase, family 3
GIFBOPMH_00363 5.5e-198 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
GIFBOPMH_00364 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
GIFBOPMH_00365 1.3e-221 G Major Facilitator Superfamily
GIFBOPMH_00366 7.7e-227 L Transposase
GIFBOPMH_00367 7.4e-186 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GIFBOPMH_00368 6.7e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
GIFBOPMH_00369 9.1e-12 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
GIFBOPMH_00370 2.2e-99 nusG K Participates in transcription elongation, termination and antitermination
GIFBOPMH_00371 1.2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
GIFBOPMH_00372 1.6e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
GIFBOPMH_00373 6.1e-109 glnP P ABC transporter permease
GIFBOPMH_00374 7e-113 glnQ 3.6.3.21 E ABC transporter
GIFBOPMH_00375 3.7e-134 aatB ET ABC transporter substrate-binding protein
GIFBOPMH_00376 3.1e-96 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
GIFBOPMH_00377 9.4e-51 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
GIFBOPMH_00378 1.3e-146 kcsA P Ion transport protein
GIFBOPMH_00379 2.7e-32
GIFBOPMH_00380 4.6e-106 rsmC 2.1.1.172 J Methyltransferase
GIFBOPMH_00381 1.9e-23
GIFBOPMH_00382 1.6e-79 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
GIFBOPMH_00383 1.8e-307 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GIFBOPMH_00384 5.9e-52 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
GIFBOPMH_00385 1.8e-107 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
GIFBOPMH_00386 1.5e-25 S Protein of unknown function (DUF2508)
GIFBOPMH_00387 1.6e-109 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
GIFBOPMH_00388 1e-51 yaaQ S Cyclic-di-AMP receptor
GIFBOPMH_00389 1.5e-150 holB 2.7.7.7 L DNA polymerase III
GIFBOPMH_00390 1.1e-56 yabA L Involved in initiation control of chromosome replication
GIFBOPMH_00391 4.1e-153 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
GIFBOPMH_00392 7.9e-129 fat 3.1.2.21 I Acyl-ACP thioesterase
GIFBOPMH_00393 1.3e-85 folT S ECF transporter, substrate-specific component
GIFBOPMH_00394 3.8e-128 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
GIFBOPMH_00395 1.3e-96 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
GIFBOPMH_00396 6.2e-196 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
GIFBOPMH_00397 4.2e-107
GIFBOPMH_00398 2.7e-222 clcA P chloride
GIFBOPMH_00399 4.3e-46
GIFBOPMH_00400 3.4e-97 S Protein of unknown function (DUF3990)
GIFBOPMH_00401 1e-187 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
GIFBOPMH_00402 4.1e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
GIFBOPMH_00403 1.7e-243 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
GIFBOPMH_00404 7.4e-45
GIFBOPMH_00405 3.2e-122 L oxidized base lesion DNA N-glycosylase activity
GIFBOPMH_00406 1.2e-74 apfA 2.7.7.72, 3.6.1.61 F NUDIX domain
GIFBOPMH_00407 1.2e-48 L bacterial-type proximal promoter sequence-specific DNA binding
GIFBOPMH_00408 3.8e-48 S Bacterial toxin of type II toxin-antitoxin system, YafQ
GIFBOPMH_00409 7.7e-227 L Transposase
GIFBOPMH_00410 1.3e-229 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
GIFBOPMH_00411 1.4e-136 K Helix-turn-helix XRE-family like proteins
GIFBOPMH_00412 8.3e-68
GIFBOPMH_00413 0.0 uup S ABC transporter, ATP-binding protein
GIFBOPMH_00414 8.7e-116 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
GIFBOPMH_00415 1.7e-99 yvdD 3.2.2.10 S Belongs to the LOG family
GIFBOPMH_00416 1.1e-77 XK27_02470 K LytTr DNA-binding domain
GIFBOPMH_00417 8.7e-123 liaI S membrane
GIFBOPMH_00418 8.8e-44 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
GIFBOPMH_00419 7e-295 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
GIFBOPMH_00421 0.0 fhaB 4.3.1.7 UW LPXTG-motif cell wall anchor domain protein
GIFBOPMH_00422 0.0 fhaB 4.3.1.7 UW LPXTG-motif cell wall anchor domain protein
GIFBOPMH_00423 1.1e-229 nisT V ABC transporter
GIFBOPMH_00424 8.1e-76 nisT V ABC transporter
GIFBOPMH_00425 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
GIFBOPMH_00426 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
GIFBOPMH_00427 1.1e-98 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
GIFBOPMH_00428 2e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
GIFBOPMH_00429 3.8e-30 yajC U Preprotein translocase
GIFBOPMH_00430 6.6e-281 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
GIFBOPMH_00431 3.3e-203 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
GIFBOPMH_00432 3.3e-183 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
GIFBOPMH_00433 7.7e-226 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
GIFBOPMH_00434 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
GIFBOPMH_00435 2.6e-42 yrzL S Belongs to the UPF0297 family
GIFBOPMH_00436 2.3e-72 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
GIFBOPMH_00437 4.1e-50 yrzB S Belongs to the UPF0473 family
GIFBOPMH_00438 1.4e-90 cvpA S Colicin V production protein
GIFBOPMH_00439 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
GIFBOPMH_00440 1.1e-52 trxA O Belongs to the thioredoxin family
GIFBOPMH_00441 7.1e-68 yslB S Protein of unknown function (DUF2507)
GIFBOPMH_00442 9.1e-139 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
GIFBOPMH_00443 4.6e-114 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
GIFBOPMH_00444 2.7e-216 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GIFBOPMH_00445 3.7e-157 ykuT M mechanosensitive ion channel
GIFBOPMH_00446 7.4e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
GIFBOPMH_00447 4e-51
GIFBOPMH_00448 8.5e-212 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
GIFBOPMH_00449 3e-171 ccpA K catabolite control protein A
GIFBOPMH_00450 1.3e-288 V ABC transporter transmembrane region
GIFBOPMH_00451 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M Penicillin binding protein transpeptidase domain
GIFBOPMH_00452 1.4e-272 pepV 3.5.1.18 E dipeptidase PepV
GIFBOPMH_00453 6e-263 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
GIFBOPMH_00454 2e-55
GIFBOPMH_00455 4e-259 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
GIFBOPMH_00456 3.8e-96 yutD S Protein of unknown function (DUF1027)
GIFBOPMH_00457 3.1e-147 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
GIFBOPMH_00458 9.9e-101 S Protein of unknown function (DUF1461)
GIFBOPMH_00459 1e-116 dedA S SNARE-like domain protein
GIFBOPMH_00460 8e-174 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
GIFBOPMH_00461 1.9e-59 yugI 5.3.1.9 J general stress protein
GIFBOPMH_00466 2.8e-216 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
GIFBOPMH_00467 3.4e-248 qacA EGP Major facilitator Superfamily
GIFBOPMH_00468 9.7e-115 3.6.1.27 I Acid phosphatase homologues
GIFBOPMH_00469 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
GIFBOPMH_00470 2.7e-302 ytgP S Polysaccharide biosynthesis protein
GIFBOPMH_00471 4.4e-203 I Protein of unknown function (DUF2974)
GIFBOPMH_00472 3.8e-123
GIFBOPMH_00473 2.1e-141 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
GIFBOPMH_00474 4.4e-118 M ErfK YbiS YcfS YnhG
GIFBOPMH_00475 1.7e-155 dacA 3.4.16.4 M Belongs to the peptidase S11 family
GIFBOPMH_00476 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
GIFBOPMH_00477 6.5e-173 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
GIFBOPMH_00478 3.3e-47
GIFBOPMH_00479 6.8e-30 yjaB 2.3.1.181 K Acetyltransferase (GNAT) domain
GIFBOPMH_00480 5.2e-56 1.14.99.57 S Antibiotic biosynthesis monooxygenase
GIFBOPMH_00482 6e-94 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
GIFBOPMH_00483 1.6e-125 yfeJ 6.3.5.2 F Glutamine amidotransferase class-I
GIFBOPMH_00484 1.1e-105 ylbE GM NAD(P)H-binding
GIFBOPMH_00485 6.7e-78 yebR 1.8.4.14 T GAF domain-containing protein
GIFBOPMH_00486 4e-184 S Bacteriocin helveticin-J
GIFBOPMH_00487 2e-95 tag 3.2.2.20 L glycosylase
GIFBOPMH_00488 1.2e-153 mleP3 S Membrane transport protein
GIFBOPMH_00489 9.9e-130 S CAAX amino terminal protease
GIFBOPMH_00490 2.2e-142 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
GIFBOPMH_00491 1.1e-254 emrY EGP Major facilitator Superfamily
GIFBOPMH_00492 1.5e-256 emrY EGP Major facilitator Superfamily
GIFBOPMH_00493 9.9e-254 V ABC-type multidrug transport system, ATPase and permease components
GIFBOPMH_00494 2.2e-274 V ABC-type multidrug transport system, ATPase and permease components
GIFBOPMH_00495 3.2e-35
GIFBOPMH_00496 3.2e-250 4.2.1.53 S Myosin-crossreactive antigen
GIFBOPMH_00497 9.4e-74 2.3.1.128 K acetyltransferase
GIFBOPMH_00498 9e-131 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
GIFBOPMH_00499 5.2e-142 S hydrolase
GIFBOPMH_00500 1.1e-131 K Transcriptional regulator
GIFBOPMH_00501 3.3e-24 S PFAM Archaeal ATPase
GIFBOPMH_00502 6.8e-240 pyrP F Permease
GIFBOPMH_00503 7.6e-135 lacR K DeoR C terminal sensor domain
GIFBOPMH_00504 9.4e-74 lacA 5.3.1.26 G Ribose/Galactose Isomerase
GIFBOPMH_00505 1.9e-106 rpiB 2.1.1.222, 2.1.1.64, 5.3.1.26, 5.3.1.6 G Ribose/Galactose Isomerase
GIFBOPMH_00506 8e-128 S Domain of unknown function (DUF4867)
GIFBOPMH_00507 4.7e-85 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
GIFBOPMH_00508 1.4e-50 2.7.1.200, 2.7.1.204 G PTS system, Lactose/Cellobiose specific IIB subunit
GIFBOPMH_00509 1.8e-267 gatC G PTS system sugar-specific permease component
GIFBOPMH_00510 1.3e-38
GIFBOPMH_00511 1.1e-145 lacT K CAT RNA binding domain
GIFBOPMH_00512 7.3e-56 lacF 2.7.1.196, 2.7.1.205, 2.7.1.207 G PTS system, Lactose/Cellobiose specific IIA subunit
GIFBOPMH_00513 0.0 celB 2.7.1.196, 2.7.1.205, 2.7.1.207 G Phosphotransferase system, EIIC
GIFBOPMH_00514 5.3e-291 lacG 3.2.1.85 G Belongs to the glycosyl hydrolase 1 family
GIFBOPMH_00515 2e-163 K LysR family
GIFBOPMH_00516 0.0 1.3.5.4 C FMN_bind
GIFBOPMH_00517 5.4e-259 P Sodium:sulfate symporter transmembrane region
GIFBOPMH_00518 3.5e-166 glsA 3.5.1.2 E Belongs to the glutaminase family
GIFBOPMH_00519 1.3e-72 K Helix-turn-helix domain, rpiR family
GIFBOPMH_00520 1.1e-176 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GIFBOPMH_00521 1.3e-142 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GIFBOPMH_00522 2.3e-307 yesZ 3.2.1.23 G -beta-galactosidase
GIFBOPMH_00523 7.7e-227 L Transposase
GIFBOPMH_00524 2.3e-07 yesZ 3.2.1.23 G -beta-galactosidase
GIFBOPMH_00525 1.7e-159 gph G MFS/sugar transport protein
GIFBOPMH_00526 6e-125 I alpha/beta hydrolase fold
GIFBOPMH_00527 9.1e-146 cah5 3.1.1.41 Q Acetyl xylan esterase (AXE1)
GIFBOPMH_00528 1.7e-100 bgaR K helix_turn_helix, arabinose operon control protein
GIFBOPMH_00529 8.9e-160 4.2.2.23 PL4 E Polysaccharide lyase family 4, domain III
GIFBOPMH_00530 7.8e-235 G MFS/sugar transport protein
GIFBOPMH_00531 1.4e-110 3.6.1.27 I Acid phosphatase homologues
GIFBOPMH_00532 2.5e-274 E Phospholipase B
GIFBOPMH_00533 2.8e-249 pepC 3.4.22.40 E Peptidase C1-like family
GIFBOPMH_00534 6.2e-275 gadC E Contains amino acid permease domain
GIFBOPMH_00535 2.1e-236 yagE E amino acid
GIFBOPMH_00536 2.7e-249 ade 3.5.4.2 F Adenine deaminase C-terminal domain
GIFBOPMH_00537 1.8e-147 potD2 P ABC transporter
GIFBOPMH_00538 1.8e-150 potA11 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
GIFBOPMH_00539 9e-115 potC3 E Binding-protein-dependent transport system inner membrane component
GIFBOPMH_00540 7.3e-107 potB E Binding-protein-dependent transport system inner membrane component
GIFBOPMH_00541 3.6e-70 3.6.4.12 S PD-(D/E)XK nuclease family transposase
GIFBOPMH_00542 8.6e-293 E Amino acid permease
GIFBOPMH_00543 2e-214 mdtG EGP Major facilitator Superfamily
GIFBOPMH_00544 4.1e-30
GIFBOPMH_00545 9.8e-71 K helix_turn_helix multiple antibiotic resistance protein
GIFBOPMH_00546 4.6e-79
GIFBOPMH_00547 5.8e-205 pepA E M42 glutamyl aminopeptidase
GIFBOPMH_00548 5.8e-252 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
GIFBOPMH_00549 8.9e-262 aaxC E Arginine ornithine antiporter
GIFBOPMH_00550 1e-248 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
GIFBOPMH_00551 0.0 lacA 3.2.1.23 G -beta-galactosidase
GIFBOPMH_00552 2.3e-84 2.7.1.191 G PTS system sorbose subfamily IIB component
GIFBOPMH_00553 4e-102 G PTS system sorbose-specific iic component
GIFBOPMH_00554 2.8e-151 G PTS system mannose/fructose/sorbose family IID component
GIFBOPMH_00555 7e-69 2.7.1.191 G PTS system fructose IIA component
GIFBOPMH_00556 0.0 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
GIFBOPMH_00557 9.7e-175 lacI3 K helix_turn _helix lactose operon repressor
GIFBOPMH_00558 0.0 3.2.1.177 GH31 G Glycosyl hydrolases family 31
GIFBOPMH_00559 1.8e-265 dtpT U amino acid peptide transporter
GIFBOPMH_00560 1.9e-207 naiP EGP Major facilitator Superfamily
GIFBOPMH_00561 9.4e-142 S Alpha beta hydrolase
GIFBOPMH_00562 4.6e-68 K Transcriptional regulator, MarR family
GIFBOPMH_00563 3e-304 XK27_09600 V ABC transporter, ATP-binding protein
GIFBOPMH_00564 0.0 V ABC transporter transmembrane region
GIFBOPMH_00565 1.1e-144 glnH ET ABC transporter
GIFBOPMH_00566 1.4e-136 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GIFBOPMH_00567 9.4e-147 glnH ET ABC transporter
GIFBOPMH_00568 3.2e-110 gluC P ABC transporter permease
GIFBOPMH_00569 1.7e-106 glnP P ABC transporter permease
GIFBOPMH_00570 6.1e-43 3.6.4.12 S PD-(D/E)XK nuclease family transposase
GIFBOPMH_00571 0.0 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
GIFBOPMH_00572 8.9e-125 treR K UTRA
GIFBOPMH_00573 0.0 treB 2.7.1.211 G phosphotransferase system
GIFBOPMH_00574 3.5e-82 S Putative adhesin
GIFBOPMH_00575 2.6e-112 udk 2.7.1.48 F Cytidine monophosphokinase
GIFBOPMH_00576 1.5e-205 EGP Major facilitator superfamily
GIFBOPMH_00578 2.4e-189 2.7.13.3 T GHKL domain
GIFBOPMH_00579 1.6e-122 K LytTr DNA-binding domain
GIFBOPMH_00580 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
GIFBOPMH_00581 3.1e-83 M Transport protein ComB
GIFBOPMH_00582 7.8e-11
GIFBOPMH_00586 1.5e-30 S Enterocin A Immunity
GIFBOPMH_00589 3.7e-51 S Enterocin A Immunity
GIFBOPMH_00590 0.0 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
GIFBOPMH_00591 9.6e-155 rssA S Phospholipase, patatin family
GIFBOPMH_00592 1.7e-255 glnPH2 P ABC transporter permease
GIFBOPMH_00593 1.7e-128 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
GIFBOPMH_00594 1.2e-91 K Acetyltransferase (GNAT) domain
GIFBOPMH_00595 7.3e-158 pstS P Phosphate
GIFBOPMH_00596 1.1e-160 pstC P probably responsible for the translocation of the substrate across the membrane
GIFBOPMH_00597 1.1e-156 pstA P Phosphate transport system permease protein PstA
GIFBOPMH_00598 1.1e-147 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GIFBOPMH_00599 2.7e-140 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
GIFBOPMH_00600 2.6e-118 phoU P Plays a role in the regulation of phosphate uptake
GIFBOPMH_00601 8.3e-282 S C4-dicarboxylate anaerobic carrier
GIFBOPMH_00602 2.2e-84 dps P Belongs to the Dps family
GIFBOPMH_00603 2.6e-75 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
GIFBOPMH_00604 3.8e-86 kdgK 2.7.1.45 G pfkB family carbohydrate kinase
GIFBOPMH_00605 1.6e-133 IQ Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
GIFBOPMH_00606 1.2e-133 kduI 5.3.1.17 G Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
GIFBOPMH_00607 7.3e-153 ugl 3.2.1.180 GH88 S Glycosyl Hydrolase Family 88
GIFBOPMH_00608 5.1e-79 agaV 2.7.1.191 G PTS system sorbose subfamily IIB component
GIFBOPMH_00609 3e-118 G PTS system sorbose-specific iic component
GIFBOPMH_00610 7.4e-128 agaD G PTS system mannose/fructose/sorbose family IID component
GIFBOPMH_00611 2.1e-31 G PTS system fructose IIA component
GIFBOPMH_00613 2.3e-180 M Heparinase II/III N-terminus
GIFBOPMH_00614 9.1e-70 Z012_03480 S Psort location Cytoplasmic, score
GIFBOPMH_00615 2e-82 K Bacterial transcriptional regulator
GIFBOPMH_00617 7.5e-161 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
GIFBOPMH_00618 2.9e-125 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
GIFBOPMH_00619 1.7e-165 rihB 3.2.2.1 F Nucleoside
GIFBOPMH_00620 4e-133 gntR K UbiC transcription regulator-associated domain protein
GIFBOPMH_00621 7.7e-52 S Enterocin A Immunity
GIFBOPMH_00622 4.1e-136 glcR K DeoR C terminal sensor domain
GIFBOPMH_00623 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
GIFBOPMH_00624 1.6e-117 C nitroreductase
GIFBOPMH_00625 3.4e-129
GIFBOPMH_00626 4.4e-250 yhdP S Transporter associated domain
GIFBOPMH_00627 4.5e-100 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
GIFBOPMH_00628 6.7e-232 potE E amino acid
GIFBOPMH_00629 6.4e-136 M Glycosyl hydrolases family 25
GIFBOPMH_00630 6e-198 yfmL 3.6.4.13 L DEAD DEAH box helicase
GIFBOPMH_00631 3.4e-247 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GIFBOPMH_00633 2e-211 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
GIFBOPMH_00634 7.6e-18 gtcA S Teichoic acid glycosylation protein
GIFBOPMH_00635 2.1e-76 fld C Flavodoxin
GIFBOPMH_00636 5.7e-160 map 3.4.11.18 E Methionine Aminopeptidase
GIFBOPMH_00637 1e-154 yihY S Belongs to the UPF0761 family
GIFBOPMH_00638 2.3e-170 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
GIFBOPMH_00639 6.8e-145 3.6.4.12 S PD-(D/E)XK nuclease family transposase
GIFBOPMH_00640 3.3e-175 E ABC transporter, ATP-binding protein
GIFBOPMH_00641 1.2e-283 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
GIFBOPMH_00642 4.5e-65 O OsmC-like protein
GIFBOPMH_00643 2.1e-111 2.7.6.5 T Region found in RelA / SpoT proteins
GIFBOPMH_00644 9e-116 K response regulator
GIFBOPMH_00645 4.1e-226 sptS 2.7.13.3 T Histidine kinase
GIFBOPMH_00646 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
GIFBOPMH_00647 2.4e-62
GIFBOPMH_00648 0.0 pepN 3.4.11.2 E aminopeptidase
GIFBOPMH_00649 2.5e-133 S haloacid dehalogenase-like hydrolase
GIFBOPMH_00650 2.6e-121 S CAAX protease self-immunity
GIFBOPMH_00652 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
GIFBOPMH_00653 1.9e-66
GIFBOPMH_00654 7.2e-101 fic D Fic/DOC family
GIFBOPMH_00655 1.5e-211 I transferase activity, transferring acyl groups other than amino-acyl groups
GIFBOPMH_00656 8.1e-125 pnb C nitroreductase
GIFBOPMH_00657 9.9e-79 S Domain of unknown function (DUF4811)
GIFBOPMH_00658 4.1e-262 lmrB EGP Major facilitator Superfamily
GIFBOPMH_00659 1.3e-70 K MerR HTH family regulatory protein
GIFBOPMH_00660 6.8e-46 oppA E ABC transporter substrate-binding protein
GIFBOPMH_00661 1.9e-280 oppA E ABC transporter substrate-binding protein
GIFBOPMH_00662 1.3e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
GIFBOPMH_00663 1.8e-253 pepC 3.4.22.40 E Peptidase C1-like family
GIFBOPMH_00664 1.1e-164 2.7.1.2 GK ROK family
GIFBOPMH_00665 2.5e-158 rhaS6 K helix_turn_helix, arabinose operon control protein
GIFBOPMH_00666 6.8e-175 I Carboxylesterase family
GIFBOPMH_00667 1.9e-185 yhjX P Major Facilitator Superfamily
GIFBOPMH_00668 3.4e-279 S Predicted membrane protein (DUF2207)
GIFBOPMH_00669 1.8e-54 K Acetyltransferase (GNAT) domain
GIFBOPMH_00670 1.2e-52
GIFBOPMH_00671 2.1e-117 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
GIFBOPMH_00672 3.2e-90 S ECF-type riboflavin transporter, S component
GIFBOPMH_00673 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
GIFBOPMH_00674 3.5e-12
GIFBOPMH_00675 7.8e-228 S Uncharacterized protein conserved in bacteria (DUF2325)
GIFBOPMH_00676 1.8e-145 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GIFBOPMH_00677 1.7e-60 arsC 1.20.4.1 P Belongs to the ArsC family
GIFBOPMH_00678 2e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
GIFBOPMH_00679 2.8e-48 rpmA J Belongs to the bacterial ribosomal protein bL27 family
GIFBOPMH_00680 2.3e-193 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
GIFBOPMH_00681 8.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GIFBOPMH_00682 2.2e-73 yqhY S Asp23 family, cell envelope-related function
GIFBOPMH_00683 8.2e-64 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
GIFBOPMH_00684 1.2e-152 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
GIFBOPMH_00685 4.4e-250 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GIFBOPMH_00686 3.8e-35 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
GIFBOPMH_00687 1.8e-156 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
GIFBOPMH_00688 6.6e-153 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
GIFBOPMH_00689 2.6e-252 recN L May be involved in recombinational repair of damaged DNA
GIFBOPMH_00690 1.8e-47
GIFBOPMH_00691 8.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
GIFBOPMH_00692 1.7e-31 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
GIFBOPMH_00693 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
GIFBOPMH_00694 4.8e-171 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
GIFBOPMH_00695 1.3e-230 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
GIFBOPMH_00696 1e-139 stp 3.1.3.16 T phosphatase
GIFBOPMH_00697 0.0 KLT serine threonine protein kinase
GIFBOPMH_00698 1.2e-160 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
GIFBOPMH_00699 1.2e-117 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
GIFBOPMH_00700 2e-115 thiN 2.7.6.2 H thiamine pyrophosphokinase
GIFBOPMH_00701 1.6e-25 rpmB J Belongs to the bacterial ribosomal protein bL28 family
GIFBOPMH_00702 1.4e-57 asp S Asp23 family, cell envelope-related function
GIFBOPMH_00703 9e-306 yloV S DAK2 domain fusion protein YloV
GIFBOPMH_00704 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
GIFBOPMH_00705 1.7e-179 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
GIFBOPMH_00706 2.6e-36 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
GIFBOPMH_00707 1.3e-190 oppD P Belongs to the ABC transporter superfamily
GIFBOPMH_00708 7.6e-180 oppF P Belongs to the ABC transporter superfamily
GIFBOPMH_00709 2.9e-179 oppB P ABC transporter permease
GIFBOPMH_00710 5.1e-162 oppC P Binding-protein-dependent transport system inner membrane component
GIFBOPMH_00711 0.0 oppA E ABC transporter substrate-binding protein
GIFBOPMH_00712 0.0 oppA E ABC transporter substrate-binding protein
GIFBOPMH_00713 1.3e-122 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
GIFBOPMH_00714 0.0 smc D Required for chromosome condensation and partitioning
GIFBOPMH_00715 1e-163 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
GIFBOPMH_00716 2e-282 pipD E Dipeptidase
GIFBOPMH_00717 7e-56 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
GIFBOPMH_00718 1.6e-226 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
GIFBOPMH_00719 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
GIFBOPMH_00720 2.3e-90 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
GIFBOPMH_00721 6.7e-133 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
GIFBOPMH_00722 1.3e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
GIFBOPMH_00723 1.3e-116 lepB 3.4.21.89 U Belongs to the peptidase S26 family
GIFBOPMH_00724 1.7e-70 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
GIFBOPMH_00725 4.2e-110 ung2 3.2.2.27 L Uracil-DNA glycosylase
GIFBOPMH_00726 7.9e-114 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
GIFBOPMH_00727 4.7e-33 ynzC S UPF0291 protein
GIFBOPMH_00728 1.9e-30 yneF S Uncharacterised protein family (UPF0154)
GIFBOPMH_00729 0.0 mdlA V ABC transporter
GIFBOPMH_00730 8.5e-294 mdlB V ABC transporter
GIFBOPMH_00731 4.2e-225 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
GIFBOPMH_00732 1.4e-115 plsC 2.3.1.51 I Acyltransferase
GIFBOPMH_00733 6.5e-190 yabB 2.1.1.223 L Methyltransferase small domain
GIFBOPMH_00734 6.2e-140 rpsB J Belongs to the universal ribosomal protein uS2 family
GIFBOPMH_00735 2.7e-180 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
GIFBOPMH_00736 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
GIFBOPMH_00737 7.6e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
GIFBOPMH_00738 2.2e-131 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
GIFBOPMH_00739 1.3e-137 cdsA 2.7.7.41 S Belongs to the CDS family
GIFBOPMH_00740 5.7e-228 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
GIFBOPMH_00741 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
GIFBOPMH_00742 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
GIFBOPMH_00743 8.8e-81 rimP J Required for maturation of 30S ribosomal subunits
GIFBOPMH_00744 2.5e-196 nusA K Participates in both transcription termination and antitermination
GIFBOPMH_00745 1.5e-46 ylxR K Protein of unknown function (DUF448)
GIFBOPMH_00746 1.8e-45 rplGA J ribosomal protein
GIFBOPMH_00747 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
GIFBOPMH_00748 1.3e-60 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
GIFBOPMH_00749 2.8e-160 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
GIFBOPMH_00750 2.8e-171 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
GIFBOPMH_00751 4.4e-259 lsa S ABC transporter
GIFBOPMH_00752 3.3e-112 S GyrI-like small molecule binding domain
GIFBOPMH_00753 3.2e-192 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
GIFBOPMH_00754 2.5e-77 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
GIFBOPMH_00755 0.0 dnaK O Heat shock 70 kDa protein
GIFBOPMH_00756 1e-170 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
GIFBOPMH_00757 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
GIFBOPMH_00758 3.9e-122 srtA 3.4.22.70 M sortase family
GIFBOPMH_00759 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
GIFBOPMH_00760 1.3e-96 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
GIFBOPMH_00761 2.2e-274 yjeM E Amino Acid
GIFBOPMH_00762 4.1e-278 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
GIFBOPMH_00763 2e-185 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
GIFBOPMH_00764 2.6e-86 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
GIFBOPMH_00765 4.2e-245 G Major Facilitator
GIFBOPMH_00766 0.0 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
GIFBOPMH_00767 2.9e-151 lysR5 K LysR substrate binding domain
GIFBOPMH_00769 2.8e-97 3.6.1.27 I Acid phosphatase homologues
GIFBOPMH_00770 1.6e-246 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GIFBOPMH_00771 6.9e-17 S Sugar efflux transporter for intercellular exchange
GIFBOPMH_00772 3.3e-305 ybiT S ABC transporter, ATP-binding protein
GIFBOPMH_00773 4.5e-164 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GIFBOPMH_00774 3.9e-40 K Helix-turn-helix domain
GIFBOPMH_00775 5.3e-137 F DNA/RNA non-specific endonuclease
GIFBOPMH_00776 2.4e-45 L nuclease
GIFBOPMH_00777 2.5e-155 metQ1 P Belongs to the nlpA lipoprotein family
GIFBOPMH_00778 2.6e-186 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
GIFBOPMH_00779 6.2e-67 metI P ABC transporter permease
GIFBOPMH_00780 7.2e-264 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
GIFBOPMH_00781 6.8e-251 frdC 1.3.5.4 C FAD binding domain
GIFBOPMH_00782 9.8e-169 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
GIFBOPMH_00783 1.2e-250 yjjP S Putative threonine/serine exporter
GIFBOPMH_00784 3.3e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
GIFBOPMH_00785 0.0 aha1 P E1-E2 ATPase
GIFBOPMH_00786 3.7e-299 S Bacterial membrane protein, YfhO
GIFBOPMH_00787 4.8e-85 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
GIFBOPMH_00788 3.9e-165 prmA J Ribosomal protein L11 methyltransferase
GIFBOPMH_00789 4.1e-65
GIFBOPMH_00790 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
GIFBOPMH_00791 1.7e-70 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
GIFBOPMH_00792 5.8e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
GIFBOPMH_00793 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
GIFBOPMH_00794 2.4e-220 patA 2.6.1.1 E Aminotransferase
GIFBOPMH_00795 1.5e-79 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
GIFBOPMH_00796 5.4e-141 E GDSL-like Lipase/Acylhydrolase family
GIFBOPMH_00797 4.9e-99 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
GIFBOPMH_00798 1.3e-159 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GIFBOPMH_00799 3.9e-156 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
GIFBOPMH_00800 1.5e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
GIFBOPMH_00801 4.3e-34 yqeY S YqeY-like protein
GIFBOPMH_00802 6.1e-19 yqeY S YqeY-like protein
GIFBOPMH_00803 6.1e-174 phoH T phosphate starvation-inducible protein PhoH
GIFBOPMH_00804 4e-90 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
GIFBOPMH_00805 3.3e-169 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
GIFBOPMH_00806 2e-135 recO L Involved in DNA repair and RecF pathway recombination
GIFBOPMH_00807 5.1e-178 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
GIFBOPMH_00808 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
GIFBOPMH_00809 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
GIFBOPMH_00810 2.9e-199 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
GIFBOPMH_00811 4.5e-110 trmK 2.1.1.217 S SAM-dependent methyltransferase
GIFBOPMH_00812 7.9e-143 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
GIFBOPMH_00813 4.7e-243 pepT 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
GIFBOPMH_00814 3.6e-58 yvoA_1 K Transcriptional regulator, GntR family
GIFBOPMH_00815 6.4e-120 skfE V ATPases associated with a variety of cellular activities
GIFBOPMH_00816 1.3e-127
GIFBOPMH_00817 5.6e-115
GIFBOPMH_00818 8.1e-22
GIFBOPMH_00819 4.4e-103 lepB 3.4.21.89 U Belongs to the peptidase S26 family
GIFBOPMH_00820 2.5e-127
GIFBOPMH_00821 1.3e-163
GIFBOPMH_00822 2.1e-231 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
GIFBOPMH_00823 4.7e-49 ybjQ S Belongs to the UPF0145 family
GIFBOPMH_00824 2.5e-157 XK27_05540 S DUF218 domain
GIFBOPMH_00825 2.9e-148 yxeH S hydrolase
GIFBOPMH_00826 2.3e-298 I Protein of unknown function (DUF2974)
GIFBOPMH_00827 2e-83 K Bacterial regulatory helix-turn-helix protein, lysR family
GIFBOPMH_00828 1.9e-214 1.3.5.4 C FAD binding domain
GIFBOPMH_00829 5.4e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
GIFBOPMH_00830 3.5e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
GIFBOPMH_00831 1.1e-164 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
GIFBOPMH_00832 1.8e-93 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GIFBOPMH_00833 2.8e-171 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
GIFBOPMH_00834 2e-233 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
GIFBOPMH_00835 1.5e-208 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
GIFBOPMH_00836 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
GIFBOPMH_00837 3.6e-91 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
GIFBOPMH_00838 1.4e-101 pncA Q Isochorismatase family
GIFBOPMH_00839 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
GIFBOPMH_00840 1.5e-103 alkD L DNA alkylation repair enzyme
GIFBOPMH_00841 2.3e-125 XK27_06785 V ABC transporter, ATP-binding protein
GIFBOPMH_00842 0.0 XK27_06780 V ABC transporter permease
GIFBOPMH_00843 1.7e-91 S Protein of unknown function (DUF554)
GIFBOPMH_00844 7.3e-52 K LysR substrate binding domain
GIFBOPMH_00845 5.1e-244 ubiX 2.5.1.129, 4.1.1.98 H 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
GIFBOPMH_00846 2.3e-67 ubiX 2.5.1.129 H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
GIFBOPMH_00847 5.6e-22
GIFBOPMH_00848 7.9e-83 M Belongs to the glycosyl hydrolase 28 family
GIFBOPMH_00849 4.2e-11
GIFBOPMH_00850 0.0 pepO 3.4.24.71 O Peptidase family M13
GIFBOPMH_00851 2.7e-252 lysC 2.7.2.4 E Belongs to the aspartokinase family
GIFBOPMH_00852 2.8e-196 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
GIFBOPMH_00853 8.4e-263 thrC 4.2.3.1 E Threonine synthase
GIFBOPMH_00854 8.9e-210 hom1 1.1.1.3 E homoserine dehydrogenase
GIFBOPMH_00855 7.5e-147 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
GIFBOPMH_00856 1.1e-219 glpK_1 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
GIFBOPMH_00857 5.5e-159 tktA 2.2.1.1 G Transketolase, pyrimidine binding domain
GIFBOPMH_00858 6.6e-140 2.2.1.1 G Transketolase, thiamine diphosphate binding domain
GIFBOPMH_00859 5e-166 purR13 K Bacterial regulatory proteins, lacI family
GIFBOPMH_00860 5.5e-275 G isomerase
GIFBOPMH_00861 8.5e-115 celB U The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GIFBOPMH_00862 7.3e-153 I alpha/beta hydrolase fold
GIFBOPMH_00863 1.4e-218 G Protein of unknown function (DUF4038)
GIFBOPMH_00864 6.6e-140 licT K CAT RNA binding domain
GIFBOPMH_00865 2e-283 2.7.1.208, 2.7.1.211 G phosphotransferase system
GIFBOPMH_00866 6.2e-160 I alpha/beta hydrolase fold
GIFBOPMH_00867 1.4e-169 3.2.1.40 G Alpha-L-rhamnosidase N-terminal domain
GIFBOPMH_00868 7.2e-144 3.2.1.40 G Alpha-L-rhamnosidase N-terminal domain
GIFBOPMH_00869 1.7e-128 rbsR K helix_turn _helix lactose operon repressor
GIFBOPMH_00870 6e-174 uhpT EGP Major facilitator Superfamily
GIFBOPMH_00871 4.4e-283 2.7.7.7 S Domain of unknown function (DUF5060)
GIFBOPMH_00872 1.2e-117 drgA C nitroreductase
GIFBOPMH_00873 1.5e-26
GIFBOPMH_00874 1e-84 K transcriptional antiterminator
GIFBOPMH_00875 4e-185 arbF1 G phosphotransferase system
GIFBOPMH_00876 3.8e-188 bglA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GIFBOPMH_00877 3.5e-48
GIFBOPMH_00878 1.4e-68 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
GIFBOPMH_00879 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
GIFBOPMH_00880 1.1e-117
GIFBOPMH_00881 8.5e-96 speG J Acetyltransferase (GNAT) domain
GIFBOPMH_00882 8.8e-59 K sequence-specific DNA binding
GIFBOPMH_00883 4.8e-127 S Protein of unknown function (DUF975)
GIFBOPMH_00884 2.3e-127 qmcA O prohibitin homologues
GIFBOPMH_00885 7.4e-136 ropB K Helix-turn-helix domain
GIFBOPMH_00886 7.1e-276 V ABC-type multidrug transport system, ATPase and permease components
GIFBOPMH_00887 5.8e-80 C nitroreductase
GIFBOPMH_00888 9.5e-265 V ABC transporter transmembrane region
GIFBOPMH_00889 3.9e-43
GIFBOPMH_00890 2.9e-70 K Acetyltransferase (GNAT) domain
GIFBOPMH_00891 3.1e-47 S MazG-like family
GIFBOPMH_00892 4.6e-58
GIFBOPMH_00893 2e-21 S Protein of unknown function (DUF3923)
GIFBOPMH_00894 4.8e-13 S Fic/DOC family
GIFBOPMH_00895 7.4e-92 rimL J Acetyltransferase (GNAT) domain
GIFBOPMH_00896 1.9e-83 2.3.1.57 K Acetyltransferase (GNAT) family
GIFBOPMH_00898 2.3e-116 XK27_07525 3.6.1.55 F NUDIX domain
GIFBOPMH_00899 1.6e-195 yxaM EGP Major facilitator Superfamily
GIFBOPMH_00900 5.2e-24 fbiB 6.3.2.12, 6.3.2.17, 6.3.2.31, 6.3.2.34 S F420-0:Gamma-glutamyl ligase
GIFBOPMH_00901 7.5e-21 S Bacterial toxin of type II toxin-antitoxin system, YafQ
GIFBOPMH_00902 6.6e-41 S RelB antitoxin
GIFBOPMH_00903 1.5e-78 S AAA domain
GIFBOPMH_00904 9.2e-67 3.6.1.55 F NUDIX domain
GIFBOPMH_00905 7.6e-135 2.4.2.3 F Phosphorylase superfamily
GIFBOPMH_00906 5.1e-43 2.4.2.3 F Phosphorylase superfamily
GIFBOPMH_00907 5e-73 2.4.2.3 F Phosphorylase superfamily
GIFBOPMH_00908 5.2e-75 6.3.3.2 S ASCH
GIFBOPMH_00909 6.9e-63 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
GIFBOPMH_00910 1.6e-155 rbsU U ribose uptake protein RbsU
GIFBOPMH_00911 3.5e-43 ps301 K sequence-specific DNA binding
GIFBOPMH_00912 7.3e-144 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
GIFBOPMH_00913 2.3e-157 G Transmembrane secretion effector
GIFBOPMH_00914 1.9e-273 V ABC-type multidrug transport system, ATPase and permease components
GIFBOPMH_00915 4.2e-252 V ABC-type multidrug transport system, ATPase and permease components
GIFBOPMH_00916 1.3e-182 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
GIFBOPMH_00917 4.3e-200 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
GIFBOPMH_00918 6e-169 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
GIFBOPMH_00919 2.1e-163 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
GIFBOPMH_00920 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
GIFBOPMH_00921 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
GIFBOPMH_00922 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
GIFBOPMH_00923 4.2e-86 ypmB S Protein conserved in bacteria
GIFBOPMH_00924 4.2e-258 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
GIFBOPMH_00925 2e-107 dnaD L DnaD domain protein
GIFBOPMH_00926 6.3e-111 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
GIFBOPMH_00927 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
GIFBOPMH_00928 1e-116 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
GIFBOPMH_00929 2.3e-104 ypsA S Belongs to the UPF0398 family
GIFBOPMH_00930 6e-68 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
GIFBOPMH_00931 3.9e-212 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
GIFBOPMH_00932 6.3e-232 cpdA S Calcineurin-like phosphoesterase
GIFBOPMH_00933 1.8e-170 degV S DegV family
GIFBOPMH_00934 4.8e-52
GIFBOPMH_00935 6.1e-310 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
GIFBOPMH_00936 2.4e-75 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
GIFBOPMH_00937 9.7e-169 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GIFBOPMH_00938 2.8e-196 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
GIFBOPMH_00939 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
GIFBOPMH_00940 2.3e-309 FbpA K Fibronectin-binding protein
GIFBOPMH_00941 1.6e-62
GIFBOPMH_00942 7.2e-161 degV S EDD domain protein, DegV family
GIFBOPMH_00943 3.9e-148
GIFBOPMH_00944 9.3e-161 K Transcriptional regulator
GIFBOPMH_00945 1.9e-195 xerS L Belongs to the 'phage' integrase family
GIFBOPMH_00946 5.5e-124 yoaK S Protein of unknown function (DUF1275)
GIFBOPMH_00947 4.2e-109 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
GIFBOPMH_00948 7.2e-303 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
GIFBOPMH_00949 2.8e-171 ppaC 3.6.1.1 C inorganic pyrophosphatase
GIFBOPMH_00950 4.4e-172 K Transcriptional regulator
GIFBOPMH_00951 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GIFBOPMH_00952 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
GIFBOPMH_00953 3.2e-113 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
GIFBOPMH_00954 1e-105 lacA 2.3.1.79 S Transferase hexapeptide repeat
GIFBOPMH_00955 8e-109 magIII L Base excision DNA repair protein, HhH-GPD family
GIFBOPMH_00956 1.6e-157 akr5f 1.1.1.346 S reductase
GIFBOPMH_00957 2.5e-46 C Aldo/keto reductase family
GIFBOPMH_00958 3.1e-116 V ATPases associated with a variety of cellular activities
GIFBOPMH_00959 3.7e-187 S ABC-2 family transporter protein
GIFBOPMH_00960 2.2e-143
GIFBOPMH_00961 3.8e-36 ropB K Helix-turn-helix domain
GIFBOPMH_00962 3.3e-28
GIFBOPMH_00963 3.9e-117 ybhL S Belongs to the BI1 family
GIFBOPMH_00964 5.4e-107 4.1.1.45 S Amidohydrolase
GIFBOPMH_00965 1e-240 yrvN L AAA C-terminal domain
GIFBOPMH_00966 3.9e-119 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
GIFBOPMH_00967 7.7e-80 XK27_09675 K Acetyltransferase (GNAT) domain
GIFBOPMH_00968 4.2e-48 K Acetyltransferase (GNAT) domain
GIFBOPMH_00969 6.9e-96 XK27_00915 C Luciferase-like monooxygenase
GIFBOPMH_00970 2.5e-17 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
GIFBOPMH_00971 3.6e-26 yafQ S Bacterial toxin of type II toxin-antitoxin system, YafQ
GIFBOPMH_00972 1.6e-260 npr 1.11.1.1 C NADH oxidase
GIFBOPMH_00973 1.7e-42 S Hydrolases of the alpha beta superfamily
GIFBOPMH_00975 1.1e-64 K Helix-turn-helix domain, rpiR family
GIFBOPMH_00976 5.6e-74 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
GIFBOPMH_00977 5.1e-60 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
GIFBOPMH_00978 5e-139 S Oxidoreductase family, NAD-binding Rossmann fold
GIFBOPMH_00979 1.8e-150 C Aldo keto reductase
GIFBOPMH_00980 2.3e-163 lmrA 3.6.3.44 V ABC transporter
GIFBOPMH_00981 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
GIFBOPMH_00982 0.0 uvrA3 L excinuclease ABC, A subunit
GIFBOPMH_00983 6.1e-114 mta K helix_turn_helix, mercury resistance
GIFBOPMH_00984 0.0 uidA 3.2.1.31 G Belongs to the glycosyl hydrolase 2 family
GIFBOPMH_00985 3.7e-54 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GIFBOPMH_00986 6.5e-117 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
GIFBOPMH_00987 2.6e-242 brnQ U Component of the transport system for branched-chain amino acids
GIFBOPMH_00988 9.1e-74 yphH S Cupin domain
GIFBOPMH_00989 2.1e-110 S Fic/DOC family
GIFBOPMH_00990 4.8e-40 S Protein of unknown function (DUF3021)
GIFBOPMH_00991 1.6e-44 K LytTr DNA-binding domain
GIFBOPMH_00992 6.8e-92 cylB V ABC-2 type transporter
GIFBOPMH_00994 7.7e-227 L Transposase
GIFBOPMH_00995 6.2e-103 cylA V ABC transporter
GIFBOPMH_00996 3.1e-279 V ABC-type multidrug transport system, ATPase and permease components
GIFBOPMH_00997 6.7e-266 P ABC transporter
GIFBOPMH_00998 7.4e-214 4.2.1.6, 5.1.2.2 M Mandelate racemase muconate lactonizing enzyme
GIFBOPMH_00999 6.7e-47
GIFBOPMH_01000 1.2e-64 K HxlR family
GIFBOPMH_01001 1.7e-95 3.1.1.81 S Metallo-beta-lactamase superfamily
GIFBOPMH_01002 1.3e-246 brnQ U Component of the transport system for branched-chain amino acids
GIFBOPMH_01003 1.3e-54 S Putative adhesin
GIFBOPMH_01004 6.3e-119 3.6.1.55 F NUDIX domain
GIFBOPMH_01005 1e-105 yihX 3.1.3.10, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
GIFBOPMH_01006 8e-249
GIFBOPMH_01007 0.0 M domain protein
GIFBOPMH_01008 5.1e-213 bamA UW LPXTG-motif cell wall anchor domain protein
GIFBOPMH_01009 0.0 bamA UW LPXTG-motif cell wall anchor domain protein
GIFBOPMH_01011 4.3e-284 S domain, Protein
GIFBOPMH_01012 7.7e-227 L Transposase
GIFBOPMH_01013 3.4e-102 S Protein of unknown function (DUF1211)
GIFBOPMH_01014 7.7e-227 L Transposase
GIFBOPMH_01015 2.8e-64 K LytTr DNA-binding domain
GIFBOPMH_01016 1.7e-48 S Protein of unknown function (DUF3021)
GIFBOPMH_01017 7e-114 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
GIFBOPMH_01018 4.8e-307 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
GIFBOPMH_01019 6.4e-126 ybbM S Uncharacterised protein family (UPF0014)
GIFBOPMH_01020 2.9e-87 ybbL S ABC transporter, ATP-binding protein
GIFBOPMH_01022 2.4e-113 3.6.4.12 S PD-(D/E)XK nuclease family transposase
GIFBOPMH_01023 1.8e-40
GIFBOPMH_01024 2.1e-46
GIFBOPMH_01025 3.5e-224 lsa S ABC transporter
GIFBOPMH_01026 3.9e-103 S Alpha beta hydrolase
GIFBOPMH_01027 8e-37 S Uncharacterized protein conserved in bacteria (DUF2255)
GIFBOPMH_01028 1.5e-189 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
GIFBOPMH_01029 1.2e-86 S NADPH-dependent FMN reductase
GIFBOPMH_01030 1.2e-144 K Transcriptional regulator
GIFBOPMH_01031 2.6e-192 tanA S alpha beta
GIFBOPMH_01032 2e-43 K LysR substrate binding domain
GIFBOPMH_01033 6.4e-177 MA20_14895 S Conserved hypothetical protein 698
GIFBOPMH_01034 1.8e-54
GIFBOPMH_01036 6.5e-99 S LexA-binding, inner membrane-associated putative hydrolase
GIFBOPMH_01037 4.4e-93 K LysR substrate binding domain
GIFBOPMH_01038 6.7e-175 lacX 5.1.3.3 G Aldose 1-epimerase
GIFBOPMH_01039 6.9e-251 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
GIFBOPMH_01040 9.7e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
GIFBOPMH_01041 2.8e-168 xerC D Phage integrase, N-terminal SAM-like domain
GIFBOPMH_01042 4.2e-242 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
GIFBOPMH_01043 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
GIFBOPMH_01044 9.9e-152 dprA LU DNA protecting protein DprA
GIFBOPMH_01045 1.9e-130 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
GIFBOPMH_01046 7.3e-155 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
GIFBOPMH_01047 2.2e-260 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
GIFBOPMH_01048 2e-35 yozE S Belongs to the UPF0346 family
GIFBOPMH_01049 8e-149 DegV S Uncharacterised protein, DegV family COG1307
GIFBOPMH_01050 7.6e-115 hlyIII S protein, hemolysin III
GIFBOPMH_01051 4.9e-221 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
GIFBOPMH_01052 4.7e-160 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
GIFBOPMH_01053 1.6e-174 S cog cog1373
GIFBOPMH_01054 6e-166 mrr L restriction endonuclease
GIFBOPMH_01055 1.9e-79 kch J Ion transport protein
GIFBOPMH_01056 3.3e-18 3.1.21.3 V Type I restriction modification DNA specificity domain
GIFBOPMH_01057 3.7e-72 3.1.21.3 V Type I restriction modification DNA specificity domain
GIFBOPMH_01058 1.5e-153 L Belongs to the 'phage' integrase family
GIFBOPMH_01059 6.1e-59 hsdS 3.1.21.3 V type I restriction modification DNA specificity domain
GIFBOPMH_01060 7.2e-207 hsdM 2.1.1.72 V type I restriction-modification system
GIFBOPMH_01061 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
GIFBOPMH_01063 5.5e-231 S Tetratricopeptide repeat protein
GIFBOPMH_01064 2e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
GIFBOPMH_01065 3.6e-241 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
GIFBOPMH_01066 3e-218 rpsA 1.17.7.4 J Ribosomal protein S1
GIFBOPMH_01067 4e-116 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
GIFBOPMH_01068 7.1e-96 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
GIFBOPMH_01069 2.2e-46 M Lysin motif
GIFBOPMH_01070 1.5e-127 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GIFBOPMH_01071 1.6e-103 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
GIFBOPMH_01072 4.5e-132 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
GIFBOPMH_01073 2.6e-61 ribT K acetyltransferase
GIFBOPMH_01074 1.8e-167 xerD D recombinase XerD
GIFBOPMH_01075 4.8e-165 cvfB S S1 domain
GIFBOPMH_01076 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
GIFBOPMH_01077 1.8e-181 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
GIFBOPMH_01078 0.0 dnaE 2.7.7.7 L DNA polymerase
GIFBOPMH_01079 2.1e-28 S Protein of unknown function (DUF2929)
GIFBOPMH_01080 3.3e-302 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
GIFBOPMH_01081 5e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
GIFBOPMH_01082 1.8e-45 yrvD S Lipopolysaccharide assembly protein A domain
GIFBOPMH_01083 3.3e-141 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
GIFBOPMH_01084 1.4e-175 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
GIFBOPMH_01085 0.0 oatA I Acyltransferase
GIFBOPMH_01086 1.9e-239 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
GIFBOPMH_01087 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
GIFBOPMH_01088 1.8e-170 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
GIFBOPMH_01089 1.6e-95 dedA 3.1.3.1 S SNARE associated Golgi protein
GIFBOPMH_01090 5.1e-108 GM NmrA-like family
GIFBOPMH_01091 5.5e-245 yagE E amino acid
GIFBOPMH_01092 3.7e-79 S Rib/alpha-like repeat
GIFBOPMH_01093 1.6e-56 S Domain of unknown function DUF1828
GIFBOPMH_01094 2e-65
GIFBOPMH_01095 2.9e-26
GIFBOPMH_01096 5.9e-79 mutT 3.6.1.55 F NUDIX domain
GIFBOPMH_01097 3.1e-57
GIFBOPMH_01098 4e-07 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
GIFBOPMH_01099 1.8e-148 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
GIFBOPMH_01100 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
GIFBOPMH_01101 1.2e-185 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
GIFBOPMH_01102 8.8e-118 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
GIFBOPMH_01103 2.8e-165 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
GIFBOPMH_01104 1.1e-208 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
GIFBOPMH_01105 6.3e-221 KQ helix_turn_helix, mercury resistance
GIFBOPMH_01106 7.7e-163 V Abi-like protein
GIFBOPMH_01107 1.3e-61 S SIR2-like domain
GIFBOPMH_01108 4.6e-64 L Reverse transcriptase (RNA-dependent DNA polymerase)
GIFBOPMH_01109 6.5e-41 L reverse transcriptase
GIFBOPMH_01111 8.2e-26 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GIFBOPMH_01112 4.4e-180 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GIFBOPMH_01113 1.4e-57 S Acyltransferase family
GIFBOPMH_01114 7.7e-227 L Transposase
GIFBOPMH_01115 6.6e-68 S Acyltransferase family
GIFBOPMH_01116 2.5e-14 S Acyltransferase family
GIFBOPMH_01117 8.6e-265 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
GIFBOPMH_01118 1.5e-216 glf 5.4.99.9 M UDP-galactopyranose mutase
GIFBOPMH_01119 6.4e-210
GIFBOPMH_01120 6.8e-195 M Glycosyl transferase family 2
GIFBOPMH_01121 1.4e-198 wbbI M transferase activity, transferring glycosyl groups
GIFBOPMH_01122 2.3e-198 cps1B GT2,GT4 M Glycosyl transferases group 1
GIFBOPMH_01123 1.3e-159 GT2 S Glycosyl transferase family 2
GIFBOPMH_01124 2.2e-184 2.4.1.308 GT11 S N-acetyllactosaminide 3-alpha-galactosyltransferase activity
GIFBOPMH_01125 6.8e-125 M Glycosyltransferase sugar-binding region containing DXD motif
GIFBOPMH_01126 2.9e-90 pssE S Glycosyltransferase family 28 C-terminal domain
GIFBOPMH_01127 6.8e-83 cpsF M Oligosaccharide biosynthesis protein Alg14 like
GIFBOPMH_01128 6.4e-122 rfbP M Bacterial sugar transferase
GIFBOPMH_01129 2.4e-144 ywqE 3.1.3.48 GM PHP domain protein
GIFBOPMH_01130 8.6e-126 ywqD 2.7.10.1 D Capsular exopolysaccharide family
GIFBOPMH_01131 3.5e-136 epsB M biosynthesis protein
GIFBOPMH_01132 1.6e-161 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GIFBOPMH_01133 3.7e-79 K DNA-templated transcription, initiation
GIFBOPMH_01134 1e-159
GIFBOPMH_01135 6.7e-111 frnE Q DSBA-like thioredoxin domain
GIFBOPMH_01136 6.8e-213
GIFBOPMH_01137 1.9e-68 S Domain of unknown function (DUF4767)
GIFBOPMH_01138 1.8e-79
GIFBOPMH_01139 1.5e-83 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
GIFBOPMH_01140 1.5e-103 engB D Necessary for normal cell division and for the maintenance of normal septation
GIFBOPMH_01141 3.6e-230 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
GIFBOPMH_01142 1e-203 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
GIFBOPMH_01143 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
GIFBOPMH_01144 6.7e-156
GIFBOPMH_01145 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GIFBOPMH_01146 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
GIFBOPMH_01147 7.5e-34 rpsT J Binds directly to 16S ribosomal RNA
GIFBOPMH_01148 3.5e-172 holA 2.7.7.7 L DNA polymerase III delta subunit
GIFBOPMH_01149 0.0 comEC S Competence protein ComEC
GIFBOPMH_01150 7.7e-227 L Transposase
GIFBOPMH_01151 2.3e-61 comEA L Competence protein ComEA
GIFBOPMH_01152 5.2e-174 ylbL T Belongs to the peptidase S16 family
GIFBOPMH_01153 1.7e-82 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
GIFBOPMH_01154 1.7e-91 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
GIFBOPMH_01155 1.4e-48 ylbG S UPF0298 protein
GIFBOPMH_01156 1.6e-208 ftsW D Belongs to the SEDS family
GIFBOPMH_01157 0.0 typA T GTP-binding protein TypA
GIFBOPMH_01158 2e-100 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
GIFBOPMH_01159 1.1e-33 ykzG S Belongs to the UPF0356 family
GIFBOPMH_01160 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
GIFBOPMH_01161 2e-161 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
GIFBOPMH_01162 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
GIFBOPMH_01163 2.9e-111 S Repeat protein
GIFBOPMH_01164 2.4e-121 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
GIFBOPMH_01165 2.4e-217 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
GIFBOPMH_01166 6.3e-57 XK27_04120 S Putative amino acid metabolism
GIFBOPMH_01167 7.8e-208 iscS 2.8.1.7 E Aminotransferase class V
GIFBOPMH_01168 5e-125 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
GIFBOPMH_01169 4.1e-09
GIFBOPMH_01170 1.3e-102 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
GIFBOPMH_01171 3.3e-32 cspA K 'Cold-shock' DNA-binding domain
GIFBOPMH_01172 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
GIFBOPMH_01173 1.1e-115 gpsB D DivIVA domain protein
GIFBOPMH_01174 5e-137 ylmH S S4 domain protein
GIFBOPMH_01175 2e-27 yggT S YGGT family
GIFBOPMH_01176 4e-72 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
GIFBOPMH_01177 2.8e-228 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
GIFBOPMH_01178 2.3e-235 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
GIFBOPMH_01179 7.9e-149 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
GIFBOPMH_01180 7.5e-208 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
GIFBOPMH_01181 1.4e-259 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
GIFBOPMH_01182 1.3e-176 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
GIFBOPMH_01183 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
GIFBOPMH_01184 6.3e-55 ftsL D Cell division protein FtsL
GIFBOPMH_01185 5e-176 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
GIFBOPMH_01186 3.5e-76 mraZ K Belongs to the MraZ family
GIFBOPMH_01187 5.1e-51 S Protein of unknown function (DUF3397)
GIFBOPMH_01188 3.6e-13 S Protein of unknown function (DUF4044)
GIFBOPMH_01189 3.9e-93 mreD
GIFBOPMH_01190 1.8e-140 mreC M Involved in formation and maintenance of cell shape
GIFBOPMH_01191 2.1e-164 mreB D cell shape determining protein MreB
GIFBOPMH_01192 1.3e-108 radC L DNA repair protein
GIFBOPMH_01193 2.8e-120 S Haloacid dehalogenase-like hydrolase
GIFBOPMH_01194 1e-221 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
GIFBOPMH_01195 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
GIFBOPMH_01196 0.0 3.6.3.8 P P-type ATPase
GIFBOPMH_01197 5.8e-184 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
GIFBOPMH_01198 3.9e-109 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
GIFBOPMH_01199 2.7e-227 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
GIFBOPMH_01200 1.1e-212 iscS2 2.8.1.7 E Aminotransferase class V
GIFBOPMH_01201 1.9e-295 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
GIFBOPMH_01203 1e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
GIFBOPMH_01204 1.2e-79 yueI S Protein of unknown function (DUF1694)
GIFBOPMH_01205 1.3e-232 rarA L recombination factor protein RarA
GIFBOPMH_01207 2e-80 usp6 T universal stress protein
GIFBOPMH_01208 4.7e-224 rodA D Belongs to the SEDS family
GIFBOPMH_01209 6.6e-34 S Protein of unknown function (DUF2969)
GIFBOPMH_01210 3.4e-51 yidD S Could be involved in insertion of integral membrane proteins into the membrane
GIFBOPMH_01211 1.5e-15 S DNA-directed RNA polymerase subunit beta
GIFBOPMH_01212 2.5e-178 mbl D Cell shape determining protein MreB Mrl
GIFBOPMH_01213 2.3e-29 ywzB S Protein of unknown function (DUF1146)
GIFBOPMH_01214 4.1e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
GIFBOPMH_01215 7.4e-248 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
GIFBOPMH_01216 2.7e-169 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
GIFBOPMH_01217 7.4e-283 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
GIFBOPMH_01218 1.4e-90 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GIFBOPMH_01219 5.9e-43 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
GIFBOPMH_01220 1.2e-26 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
GIFBOPMH_01221 1.2e-126 atpB C it plays a direct role in the translocation of protons across the membrane
GIFBOPMH_01222 1.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
GIFBOPMH_01223 4e-184 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
GIFBOPMH_01224 1.9e-150 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
GIFBOPMH_01225 3.2e-179 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
GIFBOPMH_01226 3e-110 tdk 2.7.1.21 F thymidine kinase
GIFBOPMH_01227 1.6e-257 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain
GIFBOPMH_01228 1e-195 ampC V Beta-lactamase
GIFBOPMH_01231 1.1e-64
GIFBOPMH_01232 6.9e-211 EGP Major facilitator Superfamily
GIFBOPMH_01233 1e-259 pgi 5.3.1.9 G Belongs to the GPI family
GIFBOPMH_01234 4.2e-104 vanZ V VanZ like family
GIFBOPMH_01235 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GIFBOPMH_01236 6.5e-268 T PhoQ Sensor
GIFBOPMH_01237 1.9e-127 K Transcriptional regulatory protein, C terminal
GIFBOPMH_01238 5.1e-66 S SdpI/YhfL protein family
GIFBOPMH_01239 1.6e-190 manA 5.3.1.8 G mannose-6-phosphate isomerase
GIFBOPMH_01240 4.2e-22 patB 4.4.1.8 E Aminotransferase, class I
GIFBOPMH_01241 3.9e-274 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
GIFBOPMH_01242 4.4e-08 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
GIFBOPMH_01244 1.8e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
GIFBOPMH_01245 2.9e-182 ytxK 2.1.1.72 L N-6 DNA Methylase
GIFBOPMH_01246 3.1e-59 comGF U Putative Competence protein ComGF
GIFBOPMH_01247 7.7e-65
GIFBOPMH_01248 5.4e-36 comGC U Required for transformation and DNA binding
GIFBOPMH_01249 1.7e-166 comGB NU type II secretion system
GIFBOPMH_01250 8.6e-117 comGA NU Type II IV secretion system protein
GIFBOPMH_01251 4.4e-35 comGA NU Type II IV secretion system protein
GIFBOPMH_01252 4.4e-132 yebC K Transcriptional regulatory protein
GIFBOPMH_01253 3.6e-96 S VanZ like family
GIFBOPMH_01254 1.5e-206 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
GIFBOPMH_01255 1.4e-156 znuA P Belongs to the bacterial solute-binding protein 9 family
GIFBOPMH_01256 2.2e-142 yisY 1.11.1.10 S Alpha/beta hydrolase family
GIFBOPMH_01257 7.1e-111
GIFBOPMH_01258 3.3e-172 S Putative adhesin
GIFBOPMH_01259 4.2e-59 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GIFBOPMH_01260 1.2e-64 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
GIFBOPMH_01261 5.6e-136 S Sucrose-6F-phosphate phosphohydrolase
GIFBOPMH_01262 1.4e-253 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
GIFBOPMH_01263 2.2e-171 ybbR S YbbR-like protein
GIFBOPMH_01264 4.5e-152 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
GIFBOPMH_01265 4e-206 potD P ABC transporter
GIFBOPMH_01266 1.1e-136 potC P ABC transporter permease
GIFBOPMH_01267 9.6e-128 potB P ABC transporter permease
GIFBOPMH_01268 5.9e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
GIFBOPMH_01269 4.2e-164 murB 1.3.1.98 M Cell wall formation
GIFBOPMH_01270 2.3e-98 dnaQ 2.7.7.7 L DNA polymerase III
GIFBOPMH_01271 5.2e-81 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
GIFBOPMH_01272 7.4e-175 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
GIFBOPMH_01273 1.3e-133 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
GIFBOPMH_01274 1.2e-152 ycsE S Sucrose-6F-phosphate phosphohydrolase
GIFBOPMH_01275 1.1e-92
GIFBOPMH_01276 7.3e-90
GIFBOPMH_01278 5.2e-104 3.2.2.20 K acetyltransferase
GIFBOPMH_01279 3.3e-77 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
GIFBOPMH_01280 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
GIFBOPMH_01281 2.5e-28 secG U Preprotein translocase
GIFBOPMH_01282 2e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
GIFBOPMH_01283 7e-141 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
GIFBOPMH_01284 6e-227 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
GIFBOPMH_01285 3.2e-189 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
GIFBOPMH_01286 2.6e-186 cggR K Putative sugar-binding domain
GIFBOPMH_01288 2.6e-277 ycaM E amino acid
GIFBOPMH_01289 2.1e-100 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
GIFBOPMH_01290 5.8e-169 whiA K May be required for sporulation
GIFBOPMH_01291 4.4e-194 ybhK S Required for morphogenesis under gluconeogenic growth conditions
GIFBOPMH_01292 1.7e-159 rapZ S Displays ATPase and GTPase activities
GIFBOPMH_01293 3.1e-90 S Short repeat of unknown function (DUF308)
GIFBOPMH_01294 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
GIFBOPMH_01295 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
GIFBOPMH_01296 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
GIFBOPMH_01297 1.3e-187 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
GIFBOPMH_01298 9.4e-283 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
GIFBOPMH_01299 1.2e-224 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
GIFBOPMH_01300 5.2e-176 lacR K Transcriptional regulator
GIFBOPMH_01301 7.5e-191 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
GIFBOPMH_01302 3.1e-170 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
GIFBOPMH_01303 2.2e-185 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
GIFBOPMH_01304 4.3e-155 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
GIFBOPMH_01305 1.2e-174 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
GIFBOPMH_01306 8.1e-34
GIFBOPMH_01307 2.9e-182 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
GIFBOPMH_01308 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GIFBOPMH_01309 4.5e-97 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
GIFBOPMH_01310 1.7e-114 comFC S Competence protein
GIFBOPMH_01311 1.9e-170 comFA L Helicase C-terminal domain protein
GIFBOPMH_01312 1.3e-114 yvyE 3.4.13.9 S YigZ family
GIFBOPMH_01313 5.9e-192 tagO 2.7.8.33, 2.7.8.35 M transferase
GIFBOPMH_01314 1.7e-208 rny S Endoribonuclease that initiates mRNA decay
GIFBOPMH_01315 5.5e-195 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
GIFBOPMH_01316 9.7e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
GIFBOPMH_01317 8.3e-121 ymfM S Helix-turn-helix domain
GIFBOPMH_01318 8.9e-125 IQ Enoyl-(Acyl carrier protein) reductase
GIFBOPMH_01319 5.4e-223 S Peptidase M16
GIFBOPMH_01320 3.2e-220 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
GIFBOPMH_01321 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
GIFBOPMH_01322 1.9e-74 WQ51_03320 S Protein of unknown function (DUF1149)
GIFBOPMH_01323 3.5e-105 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
GIFBOPMH_01324 6.1e-208 yubA S AI-2E family transporter
GIFBOPMH_01325 6.4e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
GIFBOPMH_01326 1.7e-198 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
GIFBOPMH_01327 3.8e-221 N Uncharacterized conserved protein (DUF2075)
GIFBOPMH_01328 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
GIFBOPMH_01329 9.8e-166 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GIFBOPMH_01330 4e-150 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
GIFBOPMH_01331 6.7e-113 yjbM 2.7.6.5 S RelA SpoT domain protein
GIFBOPMH_01332 2.9e-108 yjbK S CYTH
GIFBOPMH_01333 3.2e-104 yjbH Q Thioredoxin
GIFBOPMH_01334 3.6e-152 coiA 3.6.4.12 S Competence protein
GIFBOPMH_01335 1.4e-116 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
GIFBOPMH_01336 1.4e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
GIFBOPMH_01337 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
GIFBOPMH_01338 4.2e-40 ptsH G phosphocarrier protein HPR
GIFBOPMH_01339 6.9e-26
GIFBOPMH_01340 0.0 clpE O Belongs to the ClpA ClpB family
GIFBOPMH_01341 5.6e-43 XK27_09445 S Domain of unknown function (DUF1827)
GIFBOPMH_01342 1.4e-300 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
GIFBOPMH_01343 5.2e-156 hlyX S Transporter associated domain
GIFBOPMH_01344 3.4e-77
GIFBOPMH_01345 9.5e-86
GIFBOPMH_01346 3.5e-111 ygaC J Belongs to the UPF0374 family
GIFBOPMH_01347 2.3e-137 recX 2.4.1.337 GT4 S Regulatory protein RecX
GIFBOPMH_01348 6.4e-257 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GIFBOPMH_01349 2.6e-211 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
GIFBOPMH_01350 2.7e-206 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
GIFBOPMH_01351 1.4e-209 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
GIFBOPMH_01352 1.6e-166 D Alpha beta
GIFBOPMH_01353 2.8e-08
GIFBOPMH_01354 6e-146 S haloacid dehalogenase-like hydrolase
GIFBOPMH_01355 2.7e-200 EGP Major facilitator Superfamily
GIFBOPMH_01356 3.5e-260 glnA 6.3.1.2 E glutamine synthetase
GIFBOPMH_01357 1.6e-158 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
GIFBOPMH_01358 8.1e-19 S Protein of unknown function (DUF3042)
GIFBOPMH_01359 4.4e-57 yqhL P Rhodanese-like protein
GIFBOPMH_01360 3e-34 yqgQ S Bacterial protein of unknown function (DUF910)
GIFBOPMH_01361 1.3e-117 gluP 3.4.21.105 S Rhomboid family
GIFBOPMH_01362 5.3e-77 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
GIFBOPMH_01363 7.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
GIFBOPMH_01364 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
GIFBOPMH_01365 0.0 S membrane
GIFBOPMH_01366 4e-65 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
GIFBOPMH_01367 1.9e-203 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
GIFBOPMH_01368 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GIFBOPMH_01369 4.5e-202 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
GIFBOPMH_01370 9.6e-56 yodB K Transcriptional regulator, HxlR family
GIFBOPMH_01371 1.8e-131 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
GIFBOPMH_01372 1.6e-42 acyP 3.6.1.7 C Belongs to the acylphosphatase family
GIFBOPMH_01373 6.1e-169 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GIFBOPMH_01374 3e-279 arlS 2.7.13.3 T Histidine kinase
GIFBOPMH_01375 1.1e-130 K response regulator
GIFBOPMH_01376 2.3e-93 yceD S Uncharacterized ACR, COG1399
GIFBOPMH_01377 6.6e-215 ylbM S Belongs to the UPF0348 family
GIFBOPMH_01378 4.1e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
GIFBOPMH_01379 5.8e-106 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
GIFBOPMH_01380 5.7e-120 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
GIFBOPMH_01381 2.2e-207 yqeH S Ribosome biogenesis GTPase YqeH
GIFBOPMH_01382 1.9e-89 yqeG S HAD phosphatase, family IIIA
GIFBOPMH_01383 7.1e-173 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
GIFBOPMH_01384 6.6e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
GIFBOPMH_01385 2.4e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
GIFBOPMH_01386 4e-87 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
GIFBOPMH_01387 3.3e-130 S domain protein
GIFBOPMH_01388 1.7e-168 V ABC transporter
GIFBOPMH_01389 4.3e-71 S Protein of unknown function (DUF3021)
GIFBOPMH_01390 1.4e-72 K LytTr DNA-binding domain
GIFBOPMH_01391 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
GIFBOPMH_01392 2.3e-162 dnaI L Primosomal protein DnaI
GIFBOPMH_01393 1.4e-248 dnaB L Replication initiation and membrane attachment
GIFBOPMH_01394 5.9e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
GIFBOPMH_01395 2.9e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
GIFBOPMH_01396 2.1e-154 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
GIFBOPMH_01397 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
GIFBOPMH_01398 1.1e-217 ygeX 4.3.1.15, 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
GIFBOPMH_01399 5.4e-203 EGP Major facilitator Superfamily
GIFBOPMH_01400 2.1e-62 rmaI K Transcriptional regulator
GIFBOPMH_01401 2.7e-46
GIFBOPMH_01402 1.3e-151 levD G PTS system mannose/fructose/sorbose family IID component
GIFBOPMH_01403 3e-140 M PTS system sorbose-specific iic component
GIFBOPMH_01404 4.3e-94 2.7.1.191 G PTS system sorbose subfamily IIB component
GIFBOPMH_01405 2e-66 levA G PTS system fructose IIA component
GIFBOPMH_01406 1.6e-145 rbsB G Periplasmic binding protein domain
GIFBOPMH_01407 4e-200 baeS F Sensor histidine kinase
GIFBOPMH_01408 5e-114 baeR K helix_turn_helix, Lux Regulon
GIFBOPMH_01409 1.3e-184 G Bacterial extracellular solute-binding protein
GIFBOPMH_01410 5.7e-124 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
GIFBOPMH_01411 7.2e-95 K UTRA
GIFBOPMH_01412 4.1e-253 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
GIFBOPMH_01413 3.1e-105 cutC P Participates in the control of copper homeostasis
GIFBOPMH_01414 1e-09 3.5.1.18 E Peptidase family M20/M25/M40
GIFBOPMH_01415 2.1e-126 ymfC K UTRA
GIFBOPMH_01416 1.7e-122 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
GIFBOPMH_01417 4.9e-51 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
GIFBOPMH_01419 2e-70 3.6.4.12 S PD-(D/E)XK nuclease family transposase
GIFBOPMH_01420 9.8e-123 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
GIFBOPMH_01421 3e-218 ecsB U ABC transporter
GIFBOPMH_01422 1.4e-128 ecsA V ABC transporter, ATP-binding protein
GIFBOPMH_01423 3.5e-76 hit FG Scavenger mRNA decapping enzyme C-term binding
GIFBOPMH_01424 8e-61
GIFBOPMH_01425 3.9e-25 S YtxH-like protein
GIFBOPMH_01426 5.8e-126 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
GIFBOPMH_01427 1.3e-184 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
GIFBOPMH_01428 0.0 L AAA domain
GIFBOPMH_01429 6.3e-216 yhaO L Ser Thr phosphatase family protein
GIFBOPMH_01430 4.7e-55 yheA S Belongs to the UPF0342 family
GIFBOPMH_01431 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
GIFBOPMH_01432 1.6e-146 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
GIFBOPMH_01434 9.7e-255 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
GIFBOPMH_01435 4.5e-62
GIFBOPMH_01436 6.5e-85 3.6.1.55 L NUDIX domain
GIFBOPMH_01437 4.5e-178 V Beta-lactamase
GIFBOPMH_01439 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
GIFBOPMH_01440 9.7e-60 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
GIFBOPMH_01441 3.9e-61 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
GIFBOPMH_01442 5.9e-148 xerC L Belongs to the 'phage' integrase family
GIFBOPMH_01443 2.1e-72 3.1.21.3 V Type I restriction modification DNA specificity domain
GIFBOPMH_01444 4.1e-281 2.1.1.72 V type I restriction-modification system
GIFBOPMH_01445 1.5e-250 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
GIFBOPMH_01446 2e-98 spaE S ABC-2 family transporter protein
GIFBOPMH_01448 5.2e-130 mutF V ABC transporter, ATP-binding protein
GIFBOPMH_01449 4.4e-242 nhaC C Na H antiporter NhaC
GIFBOPMH_01450 6.9e-161 salL 2.5.1.63, 2.5.1.94 K S-adenosyl-l-methionine hydroxide adenosyltransferase
GIFBOPMH_01451 2.1e-94 S UPF0397 protein
GIFBOPMH_01452 0.0 ykoD P ABC transporter, ATP-binding protein
GIFBOPMH_01453 2e-141 cbiQ P cobalt transport
GIFBOPMH_01454 3.2e-119 ybhL S Belongs to the BI1 family
GIFBOPMH_01455 0.0 rtpR 1.1.98.6, 1.17.4.1, 1.17.4.2 F ribonucleoside-triphosphate reductase activity
GIFBOPMH_01456 1.5e-62 S Domain of unknown function (DUF4430)
GIFBOPMH_01457 2.4e-87 S ECF transporter, substrate-specific component
GIFBOPMH_01458 3.3e-92 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S cob(I)alamin adenosyltransferase
GIFBOPMH_01459 2.4e-152 nss M transferase activity, transferring glycosyl groups
GIFBOPMH_01460 2.9e-109 cpsJ S glycosyl transferase family 2
GIFBOPMH_01461 1.1e-225 GT2,GT4 M family 8
GIFBOPMH_01462 1.2e-97 GT2,GT4 M family 8
GIFBOPMH_01463 7.5e-92 GT2,GT4 M family 8
GIFBOPMH_01465 6.5e-265 UW Tetratricopeptide repeat
GIFBOPMH_01467 1.9e-14 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
GIFBOPMH_01468 1.1e-158 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
GIFBOPMH_01469 3.1e-212 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
GIFBOPMH_01470 0.0 secA2 U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
GIFBOPMH_01471 7.9e-56 asp3 S Accessory Sec secretory system ASP3
GIFBOPMH_01472 4.4e-190 asp2 3.4.11.5 S Accessory Sec system GspB-transporter
GIFBOPMH_01473 2.7e-136 asp1 S Accessory Sec system protein Asp1
GIFBOPMH_01474 1.5e-150 secY2 U Part of the accessory SecA2 SecY2 system specifically required for export of
GIFBOPMH_01475 1.5e-149 S hydrolase
GIFBOPMH_01477 4.5e-166 yegS 2.7.1.107 G Lipid kinase
GIFBOPMH_01478 1.1e-272 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GIFBOPMH_01479 6e-266 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
GIFBOPMH_01480 4.3e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
GIFBOPMH_01481 8.5e-207 camS S sex pheromone
GIFBOPMH_01482 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
GIFBOPMH_01483 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
GIFBOPMH_01484 6.3e-111 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
GIFBOPMH_01485 1.3e-100 S ECF transporter, substrate-specific component
GIFBOPMH_01487 1.5e-82 ydcK S Belongs to the SprT family
GIFBOPMH_01488 1.2e-129 M Glycosyltransferase sugar-binding region containing DXD motif
GIFBOPMH_01489 2.1e-255 epsU S Polysaccharide biosynthesis protein
GIFBOPMH_01490 1.7e-218 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
GIFBOPMH_01491 2.9e-145
GIFBOPMH_01492 6.7e-287 V ABC transporter transmembrane region
GIFBOPMH_01493 0.0 pacL 3.6.3.8 P P-type ATPase
GIFBOPMH_01494 2.6e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
GIFBOPMH_01495 1.2e-282 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
GIFBOPMH_01496 0.0 tuaG GT2 M Glycosyltransferase like family 2
GIFBOPMH_01497 1.7e-196 csaB M Glycosyl transferases group 1
GIFBOPMH_01498 1e-128 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
GIFBOPMH_01499 1.5e-67 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
GIFBOPMH_01500 3.6e-123 gntR1 K UTRA
GIFBOPMH_01501 6.9e-185
GIFBOPMH_01502 7.9e-51 P Rhodanese Homology Domain
GIFBOPMH_01505 1.9e-161 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
GIFBOPMH_01506 7.1e-126 K SIS domain
GIFBOPMH_01507 8.6e-58 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
GIFBOPMH_01508 1.1e-183 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
GIFBOPMH_01509 3e-56 yjgN S Bacterial protein of unknown function (DUF898)
GIFBOPMH_01511 1.4e-87 M LysM domain protein
GIFBOPMH_01512 3.4e-106 M LysM domain protein
GIFBOPMH_01513 4.4e-116 S Putative ABC-transporter type IV
GIFBOPMH_01514 1.5e-49 psiE S Phosphate-starvation-inducible E
GIFBOPMH_01515 2.8e-72 K acetyltransferase
GIFBOPMH_01516 1.2e-129 3.6.4.12 S PD-(D/E)XK nuclease family transposase
GIFBOPMH_01518 3.7e-154 yvgN C Aldo keto reductase
GIFBOPMH_01519 1e-243 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
GIFBOPMH_01520 7.5e-191 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
GIFBOPMH_01521 0.0 lhr L DEAD DEAH box helicase
GIFBOPMH_01522 6.8e-248 P P-loop Domain of unknown function (DUF2791)
GIFBOPMH_01523 0.0 S TerB-C domain
GIFBOPMH_01524 3.5e-102 4.1.1.44 S Carboxymuconolactone decarboxylase family
GIFBOPMH_01525 4.4e-57
GIFBOPMH_01526 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
GIFBOPMH_01527 1.1e-232 cycA E Amino acid permease
GIFBOPMH_01528 7.8e-162 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GIFBOPMH_01529 2.6e-30 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GIFBOPMH_01533 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
GIFBOPMH_01534 7.2e-181 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
GIFBOPMH_01535 2.4e-195 cpoA GT4 M Glycosyltransferase, group 1 family protein
GIFBOPMH_01536 3.7e-213 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
GIFBOPMH_01548 5.4e-54
GIFBOPMH_01565 5.2e-216 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
GIFBOPMH_01566 1e-96 J Acetyltransferase (GNAT) domain
GIFBOPMH_01567 3.4e-106 yjbF S SNARE associated Golgi protein
GIFBOPMH_01568 2.3e-142 I alpha/beta hydrolase fold
GIFBOPMH_01569 3.2e-81 hipB K Helix-turn-helix
GIFBOPMH_01570 1.1e-248 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
GIFBOPMH_01571 2e-175
GIFBOPMH_01572 1.1e-119 S SNARE associated Golgi protein
GIFBOPMH_01573 4.9e-124 cof S haloacid dehalogenase-like hydrolase
GIFBOPMH_01574 0.0 ydgH S MMPL family
GIFBOPMH_01575 2e-95 yobS K Bacterial regulatory proteins, tetR family
GIFBOPMH_01576 6.9e-162 3.5.2.6 V Beta-lactamase enzyme family
GIFBOPMH_01577 5.4e-167 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
GIFBOPMH_01578 3.3e-74 yjcF S Acetyltransferase (GNAT) domain
GIFBOPMH_01579 1.3e-82 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
GIFBOPMH_01580 3.9e-70 yybA 2.3.1.57 K Transcriptional regulator
GIFBOPMH_01581 2.8e-42 ypaA S Protein of unknown function (DUF1304)
GIFBOPMH_01582 2.2e-238 G Bacterial extracellular solute-binding protein
GIFBOPMH_01583 1.8e-253 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
GIFBOPMH_01584 5.5e-147 gtsC P Binding-protein-dependent transport system inner membrane component
GIFBOPMH_01585 3.6e-157 gtsB P ABC-type sugar transport systems, permease components
GIFBOPMH_01586 2.1e-202 malK P ATPases associated with a variety of cellular activities
GIFBOPMH_01587 4.3e-280 pipD E Dipeptidase
GIFBOPMH_01588 2.2e-122 endA F DNA RNA non-specific endonuclease
GIFBOPMH_01589 2.9e-148 dkg S reductase
GIFBOPMH_01590 3.5e-197 ltrA S Bacterial low temperature requirement A protein (LtrA)
GIFBOPMH_01591 3e-181 dnaQ 2.7.7.7 L EXOIII
GIFBOPMH_01592 7.5e-141 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
GIFBOPMH_01593 4.9e-111 yviA S Protein of unknown function (DUF421)
GIFBOPMH_01594 1.9e-72 S Protein of unknown function (DUF3290)
GIFBOPMH_01595 3.2e-234 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
GIFBOPMH_01596 1.1e-78 S PAS domain
GIFBOPMH_01597 2.3e-110 4.1.2.17 G Class II Aldolase and Adducin N-terminal domain
GIFBOPMH_01599 7e-195 pts36C G iic component
GIFBOPMH_01600 2.1e-09 sgcB 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
GIFBOPMH_01601 3.5e-50 pts36A 2.7.1.200, 2.7.1.202 G phosphoenolpyruvate-dependent sugar phosphotransferase system
GIFBOPMH_01602 1.8e-59 K DeoR C terminal sensor domain
GIFBOPMH_01603 3.3e-79 lacC 2.7.1.11, 2.7.1.144, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
GIFBOPMH_01604 2.4e-57 yxeH S hydrolase
GIFBOPMH_01605 1.5e-143 pnuC H nicotinamide mononucleotide transporter
GIFBOPMH_01606 2.3e-237 M domain protein
GIFBOPMH_01607 9.6e-269 M domain protein
GIFBOPMH_01608 7.5e-43 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GIFBOPMH_01609 6.1e-43 3.6.4.12 S PD-(D/E)XK nuclease family transposase
GIFBOPMH_01610 6.2e-126 S PAS domain
GIFBOPMH_01611 7.7e-227 L Transposase
GIFBOPMH_01612 1e-241 ydjN U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
GIFBOPMH_01613 2.4e-206 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
GIFBOPMH_01614 2.6e-88 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
GIFBOPMH_01615 3e-58
GIFBOPMH_01616 0.0 uvrA3 L excinuclease ABC, A subunit
GIFBOPMH_01617 0.0 oppA E ABC transporter substrate-binding protein
GIFBOPMH_01618 1.2e-101 S PFAM Archaeal ATPase
GIFBOPMH_01619 4.7e-155 EG EamA-like transporter family
GIFBOPMH_01620 1.8e-281 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GIFBOPMH_01621 0.0 bglP 2.7.1.211 G phosphotransferase system
GIFBOPMH_01622 1.5e-147 licT K CAT RNA binding domain
GIFBOPMH_01623 0.0 fhaB M Rib/alpha-like repeat
GIFBOPMH_01624 6.9e-306 fhaB M Rib/alpha-like repeat
GIFBOPMH_01625 3.7e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
GIFBOPMH_01626 5.3e-161 coaA 2.7.1.33 F Pantothenic acid kinase
GIFBOPMH_01627 3.4e-103 E GDSL-like Lipase/Acylhydrolase
GIFBOPMH_01628 5.6e-242 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GIFBOPMH_01629 3.8e-82 rarA L MgsA AAA+ ATPase C terminal
GIFBOPMH_01630 2.3e-122 K Helix-turn-helix domain, rpiR family
GIFBOPMH_01631 2.3e-37 yvpB S Peptidase_C39 like family
GIFBOPMH_01632 3.1e-57 yvpB S Peptidase_C39 like family
GIFBOPMH_01633 5.1e-146 S cog cog1373
GIFBOPMH_01634 0.0 helD 3.6.4.12 L DNA helicase
GIFBOPMH_01635 1.8e-116 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
GIFBOPMH_01637 0.0 3.6.3.8 P ATPase, P-type (transporting), HAD superfamily, subfamily IC
GIFBOPMH_01638 4.2e-139 rpiR1 K Helix-turn-helix domain, rpiR family
GIFBOPMH_01639 2.4e-127 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
GIFBOPMH_01640 0.0 ptsG 2.7.1.199, 2.7.1.208 G phosphotransferase system, EIIB
GIFBOPMH_01641 3.4e-143 xth 3.1.11.2 L exodeoxyribonuclease III
GIFBOPMH_01642 2.4e-51
GIFBOPMH_01643 7.6e-24
GIFBOPMH_01644 1.8e-121 pgm3 G Phosphoglycerate mutase family
GIFBOPMH_01645 0.0 V FtsX-like permease family
GIFBOPMH_01646 3.5e-132 cysA V ABC transporter, ATP-binding protein
GIFBOPMH_01647 4.7e-279 E amino acid
GIFBOPMH_01648 3.5e-121 V ABC-2 type transporter
GIFBOPMH_01649 2.9e-123 V Transport permease protein
GIFBOPMH_01650 4.5e-135 V ABC transporter
GIFBOPMH_01651 1e-74
GIFBOPMH_01653 1.1e-231 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
GIFBOPMH_01654 2.5e-225 S Putative peptidoglycan binding domain
GIFBOPMH_01655 9.6e-97 M NlpC P60 family protein
GIFBOPMH_01656 2.7e-97 gmk2 2.7.4.8 F Guanylate kinase
GIFBOPMH_01657 9e-44
GIFBOPMH_01658 1.2e-264 S O-antigen ligase like membrane protein
GIFBOPMH_01659 1.3e-108
GIFBOPMH_01660 5.5e-80 nrdI F NrdI Flavodoxin like
GIFBOPMH_01661 5.1e-173 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GIFBOPMH_01662 1.2e-60
GIFBOPMH_01663 6.8e-59 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
GIFBOPMH_01664 1.8e-40
GIFBOPMH_01665 9.6e-80 S Threonine/Serine exporter, ThrE
GIFBOPMH_01666 2.9e-137 thrE S Putative threonine/serine exporter
GIFBOPMH_01667 3.4e-283 S ABC transporter, ATP-binding protein
GIFBOPMH_01668 3.5e-59
GIFBOPMH_01669 8.3e-36
GIFBOPMH_01670 7.4e-211 brpA K Cell envelope-like function transcriptional attenuator common domain protein
GIFBOPMH_01671 0.0 pepF E oligoendopeptidase F
GIFBOPMH_01672 4.4e-70 3.6.4.12 S PD-(D/E)XK nuclease family transposase
GIFBOPMH_01673 7.5e-251 lctP C L-lactate permease
GIFBOPMH_01674 2.2e-129 znuB U ABC 3 transport family
GIFBOPMH_01675 2.2e-114 fhuC P ABC transporter
GIFBOPMH_01676 3.4e-150 psaA P Belongs to the bacterial solute-binding protein 9 family
GIFBOPMH_01677 1.4e-41 K helix_turn_helix, Arsenical Resistance Operon Repressor
GIFBOPMH_01678 2.7e-135 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
GIFBOPMH_01679 4e-202 M domain protein
GIFBOPMH_01680 0.0 M domain protein
GIFBOPMH_01681 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
GIFBOPMH_01682 1e-165 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
GIFBOPMH_01683 8.4e-134 fruR K DeoR C terminal sensor domain
GIFBOPMH_01684 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
GIFBOPMH_01685 5.2e-25 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
GIFBOPMH_01686 3.3e-204 natB CP ABC-2 family transporter protein
GIFBOPMH_01687 1.8e-159 natA S ABC transporter, ATP-binding protein
GIFBOPMH_01688 9.7e-143 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
GIFBOPMH_01689 1.6e-304 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
GIFBOPMH_01690 6.4e-202 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
GIFBOPMH_01691 7.4e-121 K response regulator
GIFBOPMH_01692 0.0 V ABC transporter
GIFBOPMH_01693 1.1e-293 V ABC transporter, ATP-binding protein
GIFBOPMH_01694 1.1e-121 XK27_01040 S Protein of unknown function (DUF1129)
GIFBOPMH_01695 5.7e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
GIFBOPMH_01696 1.1e-42 yyzM S Bacterial protein of unknown function (DUF951)
GIFBOPMH_01697 2.2e-154 spo0J K Belongs to the ParB family
GIFBOPMH_01698 3.7e-137 soj D Sporulation initiation inhibitor
GIFBOPMH_01699 4.5e-139 noc K Belongs to the ParB family
GIFBOPMH_01700 4.4e-124 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
GIFBOPMH_01701 4.1e-95 cvpA S Colicin V production protein
GIFBOPMH_01702 2e-177 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
GIFBOPMH_01703 2.7e-146 3.1.3.48 T Tyrosine phosphatase family
GIFBOPMH_01704 4.9e-193 4.2.1.126 S Bacterial protein of unknown function (DUF871)
GIFBOPMH_01705 7.1e-98 azr 1.5.1.36 S NADPH-dependent FMN reductase
GIFBOPMH_01706 1.5e-97 nqr 1.5.1.36 S NADPH-dependent FMN reductase
GIFBOPMH_01707 2.9e-108 K WHG domain
GIFBOPMH_01708 1e-37
GIFBOPMH_01709 2.8e-266 pipD E Dipeptidase
GIFBOPMH_01710 1.8e-294 arbB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
GIFBOPMH_01711 2.1e-295 2.7.1.211 G phosphotransferase system
GIFBOPMH_01712 1.2e-157 K CAT RNA binding domain
GIFBOPMH_01713 2.1e-112 devA 3.6.3.25 V ABC transporter, ATP-binding protein
GIFBOPMH_01714 1.7e-169 hrtB V ABC transporter permease
GIFBOPMH_01715 5.6e-89 ygfC K Bacterial regulatory proteins, tetR family
GIFBOPMH_01716 1.1e-107 G phosphoglycerate mutase
GIFBOPMH_01717 1.7e-111 G Phosphoglycerate mutase family
GIFBOPMH_01718 1e-136 aroD S Alpha/beta hydrolase family
GIFBOPMH_01719 1.4e-99 S Protein of unknown function (DUF975)
GIFBOPMH_01720 1.4e-128 S Belongs to the UPF0246 family
GIFBOPMH_01721 2.2e-52
GIFBOPMH_01722 5.5e-124
GIFBOPMH_01723 2.7e-155 O protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
GIFBOPMH_01724 2.7e-308 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
GIFBOPMH_01725 7.3e-138 3.4.16.4, 3.5.2.6 V Beta-lactamase enzyme family
GIFBOPMH_01726 1.4e-153 ybbH_2 K Helix-turn-helix domain, rpiR family
GIFBOPMH_01727 6.2e-165 2.7.7.12 C Domain of unknown function (DUF4931)
GIFBOPMH_01728 7.6e-52 aroD 1.1.1.25, 4.2.1.10 E 3-dehydroquinate dehydratase activity
GIFBOPMH_01729 5.8e-155
GIFBOPMH_01730 2.8e-224 mdtG EGP Major facilitator Superfamily
GIFBOPMH_01731 1.1e-121 puuD S peptidase C26
GIFBOPMH_01732 9.3e-292 V ABC transporter transmembrane region
GIFBOPMH_01733 3.9e-87 ymdB S Macro domain protein
GIFBOPMH_01734 3.4e-37
GIFBOPMH_01735 0.0 scrA 2.7.1.211, 5.3.1.1 G phosphotransferase system
GIFBOPMH_01736 2.6e-288 scrB 3.2.1.26 GH32 G invertase
GIFBOPMH_01737 1e-184 scrR K Transcriptional regulator, LacI family
GIFBOPMH_01738 7.5e-53 G polysaccharide catabolic process
GIFBOPMH_01739 3.4e-59 G PTS system mannose/fructose/sorbose family IID component
GIFBOPMH_01740 1.7e-36 G PTS system sorbose-specific iic component
GIFBOPMH_01741 9.3e-33 2.7.1.191 G PTS system sorbose subfamily IIB component
GIFBOPMH_01742 7.1e-21 2.7.1.191 G PTS system fructose IIA component
GIFBOPMH_01743 8.3e-194 K Sigma-54 interaction domain
GIFBOPMH_01744 2e-36 rpoN K Sigma-54 factor, core binding domain
GIFBOPMH_01745 1.8e-144 ptp2 3.1.3.48 T Tyrosine phosphatase family
GIFBOPMH_01746 3.5e-146 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
GIFBOPMH_01747 1.1e-129 cobQ S glutamine amidotransferase
GIFBOPMH_01748 1.3e-252 yfnA E Amino Acid
GIFBOPMH_01749 6.6e-162 EG EamA-like transporter family
GIFBOPMH_01750 4e-192 asnA 6.3.1.1 F aspartate--ammonia ligase
GIFBOPMH_01751 7.5e-193 S CAAX protease self-immunity
GIFBOPMH_01752 8.2e-236 steT_1 E amino acid
GIFBOPMH_01753 2.8e-134 puuD S peptidase C26
GIFBOPMH_01754 9e-219 yifK E Amino acid permease
GIFBOPMH_01755 3.8e-249 yifK E Amino acid permease
GIFBOPMH_01756 1.8e-65 manO S Domain of unknown function (DUF956)
GIFBOPMH_01757 5.6e-172 manN G system, mannose fructose sorbose family IID component
GIFBOPMH_01758 1.7e-124 manY G PTS system
GIFBOPMH_01759 2.3e-184 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
GIFBOPMH_01763 9.7e-245 yfnA E Amino Acid
GIFBOPMH_01764 0.0 clpE2 O AAA domain (Cdc48 subfamily)
GIFBOPMH_01765 1.1e-156 S Alpha/beta hydrolase of unknown function (DUF915)
GIFBOPMH_01766 5.2e-240 pts13C 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GIFBOPMH_01767 2.1e-38
GIFBOPMH_01768 2e-214 lmrP E Major Facilitator Superfamily
GIFBOPMH_01769 1.7e-173 pbpX2 V Beta-lactamase
GIFBOPMH_01770 1.2e-249 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
GIFBOPMH_01771 3.9e-37 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GIFBOPMH_01772 1.5e-233 dltB M MBOAT, membrane-bound O-acyltransferase family
GIFBOPMH_01773 4.3e-283 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
GIFBOPMH_01775 4e-44
GIFBOPMH_01776 1.8e-196 ywhK S Membrane
GIFBOPMH_01778 7.1e-56
GIFBOPMH_01780 4.6e-31
GIFBOPMH_01781 5.9e-40
GIFBOPMH_01782 3.3e-83 ykuL S (CBS) domain
GIFBOPMH_01783 0.0 cadA P P-type ATPase
GIFBOPMH_01784 2.5e-198 napA P Sodium/hydrogen exchanger family
GIFBOPMH_01785 8.7e-47 S Putative adhesin
GIFBOPMH_01786 7e-260 V ABC transporter transmembrane region
GIFBOPMH_01787 3.6e-157 mutR K Helix-turn-helix XRE-family like proteins
GIFBOPMH_01788 3.2e-54 ropB K Transcriptional regulator
GIFBOPMH_01789 6.2e-59 ropB K Transcriptional regulator
GIFBOPMH_01790 1.6e-30
GIFBOPMH_01791 7.9e-117 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
GIFBOPMH_01792 4.5e-158 S Protein of unknown function (DUF979)
GIFBOPMH_01793 2.9e-114 S Protein of unknown function (DUF969)
GIFBOPMH_01794 2.8e-231 G PTS system sugar-specific permease component
GIFBOPMH_01795 1.7e-255 G PTS system Galactitol-specific IIC component
GIFBOPMH_01796 2.2e-90 S Protein of unknown function (DUF1440)
GIFBOPMH_01797 2.2e-103 S CAAX protease self-immunity
GIFBOPMH_01798 1.9e-190 S DUF218 domain
GIFBOPMH_01799 0.0 macB_3 V ABC transporter, ATP-binding protein
GIFBOPMH_01800 2.3e-270 cydA 1.10.3.14 C ubiquinol oxidase
GIFBOPMH_01801 2.1e-180 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
GIFBOPMH_01802 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
GIFBOPMH_01803 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
GIFBOPMH_01804 5.9e-174 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
GIFBOPMH_01805 3.5e-241 G Bacterial extracellular solute-binding protein
GIFBOPMH_01806 1.1e-167 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
GIFBOPMH_01807 6.4e-188 tcsA S ABC transporter substrate-binding protein PnrA-like
GIFBOPMH_01808 3.2e-169 fpaP 3.4.11.5 I Releases the N-terminal proline from various substrates
GIFBOPMH_01809 1.5e-174 nagZ 3.2.1.52 G Glycosyl hydrolase family 3 N terminal domain
GIFBOPMH_01810 1.2e-99 G PTS system sorbose-specific iic component
GIFBOPMH_01811 1e-119 G PTS system mannose/fructose/sorbose family IID component
GIFBOPMH_01812 4.6e-53 2.7.1.191 G PTS system sorbose subfamily IIB component
GIFBOPMH_01813 5e-89 blaA6 V Beta-lactamase
GIFBOPMH_01814 4.5e-186 ykfB 5.1.1.20 M Belongs to the mandelate racemase muconate lactonizing enzyme family
GIFBOPMH_01815 5.3e-117 3.5.2.6 V Beta-lactamase enzyme family
GIFBOPMH_01816 3.6e-144 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
GIFBOPMH_01817 1.8e-131 S membrane transporter protein
GIFBOPMH_01818 2.6e-70 3.6.4.12 S PD-(D/E)XK nuclease family transposase
GIFBOPMH_01820 1.9e-155 yeaE S Aldo/keto reductase family
GIFBOPMH_01821 6.7e-133 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
GIFBOPMH_01822 3.8e-119 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
GIFBOPMH_01823 1.8e-124 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
GIFBOPMH_01824 1.8e-234 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
GIFBOPMH_01825 4e-232 pbuG S permease
GIFBOPMH_01827 1e-85 K helix_turn_helix, mercury resistance
GIFBOPMH_01828 1.3e-146 pbuG S permease
GIFBOPMH_01829 5.8e-71 pbuG S permease
GIFBOPMH_01830 5.8e-46 I bis(5'-adenosyl)-triphosphatase activity
GIFBOPMH_01831 9.5e-226 pbuG S permease
GIFBOPMH_01832 4.5e-65 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
GIFBOPMH_01833 7.1e-117 U The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
GIFBOPMH_01834 2.1e-218 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
GIFBOPMH_01835 2.1e-78 scrR K Periplasmic binding protein domain
GIFBOPMH_01836 4.2e-79
GIFBOPMH_01837 3.9e-85
GIFBOPMH_01838 4.4e-71 atkY K Penicillinase repressor
GIFBOPMH_01839 1.9e-62 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
GIFBOPMH_01840 2.1e-45 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
GIFBOPMH_01841 0.0 copA 3.6.3.54 P P-type ATPase
GIFBOPMH_01842 2.1e-141 ropB K Helix-turn-helix XRE-family like proteins
GIFBOPMH_01843 0.0 pepO 3.4.24.71 O Peptidase family M13
GIFBOPMH_01844 4.1e-286 E Amino acid permease
GIFBOPMH_01845 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
GIFBOPMH_01846 6.7e-245 ynbB 4.4.1.1 P aluminum resistance
GIFBOPMH_01847 2.9e-70 K Acetyltransferase (GNAT) domain
GIFBOPMH_01848 7.9e-236 EGP Sugar (and other) transporter
GIFBOPMH_01849 9.3e-68 S Iron-sulphur cluster biosynthesis
GIFBOPMH_01850 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
GIFBOPMH_01851 2.2e-114 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
GIFBOPMH_01852 9.3e-106
GIFBOPMH_01853 6.8e-21 L Single-strand binding protein family
GIFBOPMH_01854 8.4e-151 ropB K Transcriptional regulator
GIFBOPMH_01855 2.6e-196 EGP Major facilitator Superfamily
GIFBOPMH_01856 7e-106 pncA Q Isochorismatase family
GIFBOPMH_01857 1.8e-281 clcA P chloride
GIFBOPMH_01858 1.6e-268 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
GIFBOPMH_01859 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
GIFBOPMH_01860 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
GIFBOPMH_01861 2.9e-249 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
GIFBOPMH_01862 1.8e-148 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
GIFBOPMH_01863 1.7e-60 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
GIFBOPMH_01864 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
GIFBOPMH_01865 2.1e-125 S Fic/DOC family
GIFBOPMH_01866 2.3e-07 K sequence-specific DNA binding
GIFBOPMH_01869 5.7e-96 D CobQ CobB MinD ParA nucleotide binding domain protein
GIFBOPMH_01871 5.4e-09 L Initiator Replication protein
GIFBOPMH_01873 1.2e-16
GIFBOPMH_01875 3.7e-17 O Preprotein translocase subunit SecB
GIFBOPMH_01877 3.4e-77 L Resolvase, N terminal domain
GIFBOPMH_01878 2.3e-30 K Antidote-toxin recognition MazE, bacterial antitoxin
GIFBOPMH_01879 3.3e-29
GIFBOPMH_01883 6.8e-11 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
GIFBOPMH_01886 1.1e-12
GIFBOPMH_01887 1.7e-193 L COG2826 Transposase and inactivated derivatives, IS30 family
GIFBOPMH_01889 2.1e-132 KLT Protein kinase domain
GIFBOPMH_01890 2e-129 V ABC-type multidrug transport system, ATPase and permease components
GIFBOPMH_01891 5.6e-38 topA2 5.99.1.2 L Topoisomerase IA
GIFBOPMH_01892 1.7e-193 L COG2826 Transposase and inactivated derivatives, IS30 family
GIFBOPMH_01893 3e-135 topA2 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
GIFBOPMH_01895 2.6e-48 L Protein of unknown function (DUF3991)
GIFBOPMH_01897 2.2e-42
GIFBOPMH_01899 3.6e-16 3.2.1.26, 3.2.1.65 GH32 G Belongs to the glycosyl hydrolase 32 family
GIFBOPMH_01900 3.8e-141 3.2.1.26, 3.2.1.65 GH32 G Belongs to the glycosyl hydrolase 32 family
GIFBOPMH_01902 7.2e-96 2.1.1.37 L C-5 cytosine-specific DNA methylase
GIFBOPMH_01903 4e-10 L Psort location Cytoplasmic, score
GIFBOPMH_01905 1.7e-51 ruvB 3.6.4.12 L four-way junction helicase activity
GIFBOPMH_01913 1.4e-11 CO COG0526, thiol-disulfide isomerase and thioredoxins
GIFBOPMH_01916 1.8e-27 M Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
GIFBOPMH_01917 3.1e-159 trsE S COG0433 Predicted ATPase
GIFBOPMH_01918 3.9e-12
GIFBOPMH_01920 1.4e-28 I mechanosensitive ion channel activity
GIFBOPMH_01921 2.2e-145 U TraM recognition site of TraD and TraG
GIFBOPMH_01927 3.9e-39 3.4.22.70 M hmm tigr01076
GIFBOPMH_01928 7e-96 M Gram-positive pilin backbone subunit 2, Cna-B-like domain
GIFBOPMH_01929 1.4e-31 3.4.22.70 M Sortase family
GIFBOPMH_01930 8.2e-10 M1-568 M Collagen binding domain
GIFBOPMH_01931 1.1e-09 D nuclear chromosome segregation
GIFBOPMH_01937 5.4e-46 S Bacterial toxin of type II toxin-antitoxin system, YafQ
GIFBOPMH_01938 3.4e-42 S RelB antitoxin
GIFBOPMH_01939 4.3e-11 2.6.1.2, 2.6.1.66 K Helix-turn-helix XRE-family like proteins
GIFBOPMH_01941 1.8e-42 ybl78 L DnaD domain protein
GIFBOPMH_01942 2.3e-11 K Transcriptional regulator
GIFBOPMH_01944 1.7e-193 L COG2826 Transposase and inactivated derivatives, IS30 family
GIFBOPMH_01945 7.6e-168 repA S Replication initiator protein A
GIFBOPMH_01946 2.5e-43 relB L Addiction module antitoxin, RelB DinJ family
GIFBOPMH_01947 4.8e-85
GIFBOPMH_01948 1.3e-39
GIFBOPMH_01949 4.2e-27
GIFBOPMH_01950 0.0 L MobA MobL family protein
GIFBOPMH_01951 3.1e-26 polC 2.4.1.129, 2.7.7.7, 3.4.16.4 GT51 L Psort location Cytoplasmic, score
GIFBOPMH_01952 9.4e-33 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
GIFBOPMH_01953 4.5e-158 S cog cog1373
GIFBOPMH_01954 6.5e-81 L Resolvase, N terminal domain
GIFBOPMH_01955 4.4e-247 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
GIFBOPMH_01956 2.3e-143 L Transposase
GIFBOPMH_01957 1.1e-69 pnuC H Nicotinamide mononucleotide transporter
GIFBOPMH_01958 0.0 M Cna protein B-type domain
GIFBOPMH_01959 1.1e-119
GIFBOPMH_01963 9.5e-69 L MobA/MobL family
GIFBOPMH_01964 3e-60 S Phage derived protein Gp49-like (DUF891)
GIFBOPMH_01965 1.3e-42 K Helix-turn-helix domain
GIFBOPMH_01966 1.4e-27 S Bacterial epsilon antitoxin
GIFBOPMH_01968 2.6e-219 V ABC transporter permease
GIFBOPMH_01969 3.7e-120 V ABC transporter, ATP-binding protein
GIFBOPMH_01970 1.1e-93 cmk 2.7.4.25, 5.3.1.12 F AAA domain
GIFBOPMH_01971 1.9e-39 S Pseudomonas avirulence D protein (AvrD)
GIFBOPMH_01972 7.5e-24 slyA K helix_turn_helix multiple antibiotic resistance protein
GIFBOPMH_01973 1.8e-99 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
GIFBOPMH_01974 1.6e-193 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GIFBOPMH_01975 2.7e-73 nrdI F Probably involved in ribonucleotide reductase function
GIFBOPMH_01976 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
GIFBOPMH_01977 1.3e-216 L COG2963 Transposase and inactivated derivatives
GIFBOPMH_01978 2.9e-28 L COG2963 Transposase and inactivated derivatives
GIFBOPMH_01979 1.8e-12
GIFBOPMH_01980 5.4e-07 S Family of unknown function (DUF5388)
GIFBOPMH_01981 1.9e-91 soj D CobQ CobB MinD ParA nucleotide binding domain protein
GIFBOPMH_01982 3.7e-32 D Antitoxin component of a toxin-antitoxin (TA) module
GIFBOPMH_01983 8.4e-35
GIFBOPMH_01986 1.7e-193 L COG2826 Transposase and inactivated derivatives, IS30 family
GIFBOPMH_01987 9.9e-14 S Domain of Unknown Function with PDB structure (DUF3850)
GIFBOPMH_01991 2.3e-57 gepA K Protein of unknown function (DUF4065)
GIFBOPMH_01992 4.2e-29
GIFBOPMH_01993 1.7e-193 L COG2826 Transposase and inactivated derivatives, IS30 family
GIFBOPMH_01995 1.1e-186 2.7.7.73, 2.7.7.80 H Involved in molybdopterin and thiamine biosynthesis, family 2
GIFBOPMH_01997 1.4e-271 V ABC-type multidrug transport system, ATPase and permease components
GIFBOPMH_01998 1.3e-285 V ABC-type multidrug transport system, ATPase and permease components
GIFBOPMH_01999 3.8e-68 hydD I carboxylic ester hydrolase activity
GIFBOPMH_02000 3.6e-14
GIFBOPMH_02001 1.7e-86 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
GIFBOPMH_02002 7.9e-29
GIFBOPMH_02003 3.9e-142 soj D AAA domain
GIFBOPMH_02004 3.9e-132 repA S Replication initiator protein A
GIFBOPMH_02005 1.1e-43 relB L Addiction module antitoxin, RelB DinJ family
GIFBOPMH_02006 1.1e-26
GIFBOPMH_02007 1.6e-112 S protein conserved in bacteria
GIFBOPMH_02008 1.4e-41
GIFBOPMH_02009 6.1e-26
GIFBOPMH_02010 0.0 L MobA MobL family protein
GIFBOPMH_02013 4.1e-07 S Bacteriocin class IIc cyclic gassericin A-like
GIFBOPMH_02016 5.7e-49 V ATPases associated with a variety of cellular activities
GIFBOPMH_02017 2.6e-11 S ABC-2 family transporter protein
GIFBOPMH_02018 2.2e-102 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
GIFBOPMH_02019 3.3e-40 K Helix-turn-helix domain
GIFBOPMH_02020 2.8e-63 S Phage derived protein Gp49-like (DUF891)
GIFBOPMH_02021 2.2e-105 L Integrase
GIFBOPMH_02023 2.4e-231 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
GIFBOPMH_02024 3.9e-226 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
GIFBOPMH_02026 7.5e-117 tpm 2.1.1.67 Q Methyltransferase
GIFBOPMH_02027 1.6e-08 acpS 2.7.6.3, 2.7.8.7, 3.2.1.52, 4.2.1.136, 4.3.1.14, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
GIFBOPMH_02028 3.5e-282 albVII I AMP-binding enzyme C-terminal domain
GIFBOPMH_02030 1.8e-144 MA20_38045 S cyclase family
GIFBOPMH_02031 3.4e-82 I Polyketide cyclase / dehydrase and lipid transport
GIFBOPMH_02033 1.5e-10 S Protein of unknown function (DUF2992)
GIFBOPMH_02034 2.2e-17 marR K Transcriptional regulator, MarR family
GIFBOPMH_02035 9e-84 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
GIFBOPMH_02036 4e-147 D CobQ CobB MinD ParA nucleotide binding domain protein

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)