ORF_ID e_value Gene_name EC_number CAZy COGs Description
AMGAALFI_00001 2.2e-251 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AMGAALFI_00002 2.9e-207 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
AMGAALFI_00003 1.7e-34 yaaA S S4 domain protein YaaA
AMGAALFI_00004 1.1e-206 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AMGAALFI_00005 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AMGAALFI_00006 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AMGAALFI_00007 1.2e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
AMGAALFI_00008 7.5e-79 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
AMGAALFI_00009 1.6e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AMGAALFI_00010 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
AMGAALFI_00011 2e-74 rplI J Binds to the 23S rRNA
AMGAALFI_00012 1.8e-235 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
AMGAALFI_00013 6.9e-207 yttB EGP Major facilitator Superfamily
AMGAALFI_00014 1.5e-60
AMGAALFI_00015 2.8e-165 S Polyphosphate nucleotide phosphotransferase, PPK2 family
AMGAALFI_00016 3.1e-101 K DNA-binding helix-turn-helix protein
AMGAALFI_00018 3.3e-74 K helix_turn_helix multiple antibiotic resistance protein
AMGAALFI_00019 0.0 lmrA 3.6.3.44 V ABC transporter
AMGAALFI_00021 3.1e-130 K response regulator
AMGAALFI_00022 0.0 vicK 2.7.13.3 T Histidine kinase
AMGAALFI_00023 4.9e-251 yycH S YycH protein
AMGAALFI_00024 2.6e-152 yycI S YycH protein
AMGAALFI_00025 1.2e-154 vicX 3.1.26.11 S domain protein
AMGAALFI_00026 6.4e-219 htrA 3.4.21.107 O serine protease
AMGAALFI_00027 1.6e-88 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
AMGAALFI_00028 8.2e-182 ABC-SBP S ABC transporter
AMGAALFI_00029 4.7e-88 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
AMGAALFI_00031 2.9e-96 S reductase
AMGAALFI_00032 4.9e-226 dhaT 1.1.1.1, 1.1.1.202 C Dehydrogenase
AMGAALFI_00033 7.5e-155 glcU U sugar transport
AMGAALFI_00034 6.5e-150 E Glyoxalase-like domain
AMGAALFI_00035 4.1e-147 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AMGAALFI_00036 2.1e-260 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
AMGAALFI_00037 1.4e-145 bacG M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AMGAALFI_00038 2e-129 V ABC transporter
AMGAALFI_00039 2.8e-219 bacI V MacB-like periplasmic core domain
AMGAALFI_00041 2.5e-20
AMGAALFI_00042 2.5e-269 S Putative peptidoglycan binding domain
AMGAALFI_00045 1.3e-28 2.7.13.3 T GHKL domain
AMGAALFI_00046 5e-75 osmC O OsmC-like protein
AMGAALFI_00047 3.2e-181 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMGAALFI_00048 1.5e-222 patA 2.6.1.1 E Aminotransferase
AMGAALFI_00049 2.7e-32
AMGAALFI_00050 0.0 clpL O associated with various cellular activities
AMGAALFI_00052 2.3e-107 wecD3 K PFAM GCN5-related N-acetyltransferase
AMGAALFI_00053 2.4e-286 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AMGAALFI_00054 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
AMGAALFI_00055 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
AMGAALFI_00056 7.1e-175 malR K Transcriptional regulator, LacI family
AMGAALFI_00057 2.1e-216 phbA 2.3.1.9 I Belongs to the thiolase family
AMGAALFI_00058 8.1e-257 malT G Major Facilitator
AMGAALFI_00059 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
AMGAALFI_00060 1.9e-121 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
AMGAALFI_00061 3e-72
AMGAALFI_00062 8.2e-87 2.7.6.5 T Region found in RelA / SpoT proteins
AMGAALFI_00063 1.9e-118 K response regulator
AMGAALFI_00064 2.4e-226 sptS 2.7.13.3 T Histidine kinase
AMGAALFI_00065 1.3e-218 yfeO P Voltage gated chloride channel
AMGAALFI_00066 1.1e-258 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
AMGAALFI_00067 3.3e-85 L PFAM transposase IS200-family protein
AMGAALFI_00068 3.5e-137 puuD S peptidase C26
AMGAALFI_00069 9.2e-169 yvgN C Aldo keto reductase
AMGAALFI_00070 0.0 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
AMGAALFI_00071 3e-87 hmpT S ECF-type riboflavin transporter, S component
AMGAALFI_00072 5.3e-264 nox C NADH oxidase
AMGAALFI_00073 9.9e-188 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
AMGAALFI_00074 1.1e-253 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AMGAALFI_00075 2.6e-90
AMGAALFI_00076 2.6e-89 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
AMGAALFI_00078 4e-242 L transposase, IS605 OrfB family
AMGAALFI_00079 1e-81 tlpA2 L Transposase IS200 like
AMGAALFI_00080 6.4e-139 puuD S peptidase C26
AMGAALFI_00081 5.5e-248 steT_1 E amino acid
AMGAALFI_00082 3.3e-13 K Transcriptional regulator, TetR family
AMGAALFI_00083 1.7e-73 K Transcriptional regulator, TetR family
AMGAALFI_00084 2.2e-72
AMGAALFI_00085 2e-275 tagE3 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
AMGAALFI_00086 2.7e-277 tagE2 2.4.1.52 GT4 M Poly(Glycerol-phosphate) alpha-glucosyltransferase
AMGAALFI_00087 0.0 M domain protein
AMGAALFI_00088 0.0 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
AMGAALFI_00089 2.3e-267 G Major Facilitator
AMGAALFI_00090 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
AMGAALFI_00091 1.9e-211 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
AMGAALFI_00092 5.5e-261 G Major Facilitator
AMGAALFI_00093 1.5e-183 K Transcriptional regulator, LacI family
AMGAALFI_00094 1.3e-268 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AMGAALFI_00096 2.9e-102 nqr 1.5.1.36 S reductase
AMGAALFI_00097 7.4e-204 XK27_09615 S reductase
AMGAALFI_00098 1.9e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
AMGAALFI_00099 3.5e-263 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
AMGAALFI_00100 2.8e-212 fhaB M Rib/alpha-like repeat
AMGAALFI_00101 8e-74 L PFAM Integrase catalytic region
AMGAALFI_00102 6.8e-297 fhaB M Rib/alpha-like repeat
AMGAALFI_00103 2.2e-251 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AMGAALFI_00104 1e-265 glnP P ABC transporter
AMGAALFI_00105 8.5e-139 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
AMGAALFI_00106 7.7e-223 cycA E Amino acid permease
AMGAALFI_00107 1e-218 nupG F Nucleoside transporter
AMGAALFI_00108 2.7e-171 rihC 3.2.2.1 F Nucleoside
AMGAALFI_00109 1.5e-163 fadB4 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
AMGAALFI_00110 5.4e-130 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
AMGAALFI_00111 7.4e-151 noc K Belongs to the ParB family
AMGAALFI_00112 3.6e-140 soj D Sporulation initiation inhibitor
AMGAALFI_00113 5.9e-155 spo0J K Belongs to the ParB family
AMGAALFI_00114 5.4e-32 yyzM S Bacterial protein of unknown function (DUF951)
AMGAALFI_00115 8.8e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
AMGAALFI_00116 3.1e-136 XK27_01040 S Protein of unknown function (DUF1129)
AMGAALFI_00117 4.4e-118 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AMGAALFI_00118 1.1e-236 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
AMGAALFI_00119 9.6e-239 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
AMGAALFI_00120 1.1e-130 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
AMGAALFI_00121 3.9e-173 deoR K sugar-binding domain protein
AMGAALFI_00122 4.1e-209 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
AMGAALFI_00123 3.8e-125 K response regulator
AMGAALFI_00124 2e-203 hpk31 2.7.13.3 T Histidine kinase
AMGAALFI_00125 9.7e-137 azlC E AzlC protein
AMGAALFI_00126 1.6e-52 azlD S branched-chain amino acid
AMGAALFI_00127 2.9e-115 K DNA-binding transcription factor activity
AMGAALFI_00128 4.4e-16 K LysR substrate binding domain
AMGAALFI_00129 3.9e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
AMGAALFI_00130 3e-248 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
AMGAALFI_00131 1.1e-172 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
AMGAALFI_00132 4.6e-129 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
AMGAALFI_00133 7.9e-117 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AMGAALFI_00134 1.6e-117 thiE 2.5.1.3, 2.7.6.2, 5.4.2.6 S Haloacid dehalogenase-like hydrolase
AMGAALFI_00135 2.9e-237 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
AMGAALFI_00136 1.1e-173 K AI-2E family transporter
AMGAALFI_00137 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
AMGAALFI_00138 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
AMGAALFI_00139 3.5e-134 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
AMGAALFI_00140 1.1e-83 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AMGAALFI_00141 7.8e-216 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AMGAALFI_00142 1.1e-253 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AMGAALFI_00143 6.1e-134 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
AMGAALFI_00144 1.8e-37 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AMGAALFI_00145 4.3e-129 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AMGAALFI_00146 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AMGAALFI_00147 2.8e-279 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AMGAALFI_00148 6.6e-198 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
AMGAALFI_00149 1.6e-105 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AMGAALFI_00150 2.2e-298 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
AMGAALFI_00151 1.2e-246 purD 6.3.4.13 F Belongs to the GARS family
AMGAALFI_00152 1e-130 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AMGAALFI_00153 3.2e-176
AMGAALFI_00154 4.4e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AMGAALFI_00157 2.3e-65 XK27_01125 L PFAM IS66 Orf2 family protein
AMGAALFI_00158 1.8e-289 L Transposase IS66 family
AMGAALFI_00160 4.9e-87
AMGAALFI_00161 4.7e-190 L PFAM Integrase catalytic region
AMGAALFI_00162 1.9e-132 3.6.1.13, 3.6.1.55 F NUDIX domain
AMGAALFI_00163 2.7e-274 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AMGAALFI_00164 1e-104 pncA Q Isochorismatase family
AMGAALFI_00165 1.1e-208 yegU O ADP-ribosylglycohydrolase
AMGAALFI_00166 1.8e-256 F Belongs to the purine-cytosine permease (2.A.39) family
AMGAALFI_00167 7.9e-168 G Belongs to the carbohydrate kinase PfkB family
AMGAALFI_00168 5.6e-39 hxlR K regulation of RNA biosynthetic process
AMGAALFI_00169 3.3e-242 yhjE EGP MFS transporter, metabolite H symporter (MHS) family protein
AMGAALFI_00170 2.6e-132 IQ Dehydrogenase reductase
AMGAALFI_00171 4.4e-38
AMGAALFI_00172 5.7e-115 ywnB S NAD(P)H-binding
AMGAALFI_00173 1.2e-38 S Cytochrome b5-like Heme/Steroid binding domain
AMGAALFI_00174 2.3e-257 nhaC C Na H antiporter NhaC
AMGAALFI_00175 1.7e-108 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AMGAALFI_00176 1.9e-50 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AMGAALFI_00178 5.5e-103 ydeN S Serine hydrolase
AMGAALFI_00179 2e-62 psiE S Phosphate-starvation-inducible E
AMGAALFI_00180 2.9e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
AMGAALFI_00182 2.1e-182 S Aldo keto reductase
AMGAALFI_00183 1.5e-67 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I PAP2 superfamily
AMGAALFI_00184 0.0 L Helicase C-terminal domain protein
AMGAALFI_00186 1.8e-256 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
AMGAALFI_00187 3.3e-55 S Sugar efflux transporter for intercellular exchange
AMGAALFI_00188 4.4e-129
AMGAALFI_00189 6.4e-131 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
AMGAALFI_00190 0.0 cadA P P-type ATPase
AMGAALFI_00191 3.1e-228 5.4.2.7 G Metalloenzyme superfamily
AMGAALFI_00193 3.8e-159 1.6.5.2 GM NAD(P)H-binding
AMGAALFI_00194 5.8e-52 K Transcriptional regulator
AMGAALFI_00195 7e-164 proX M ABC transporter, substrate-binding protein, QAT family
AMGAALFI_00196 9.7e-110 proWZ P ABC transporter permease
AMGAALFI_00197 1.3e-142 proV E ABC transporter, ATP-binding protein
AMGAALFI_00198 5.8e-104 proW P ABC transporter, permease protein
AMGAALFI_00199 2e-79 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
AMGAALFI_00200 4.9e-254 clcA P chloride
AMGAALFI_00201 4.4e-219 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
AMGAALFI_00202 3.1e-103 metI P ABC transporter permease
AMGAALFI_00203 1.5e-192 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AMGAALFI_00204 3.9e-156 metQ1 P Belongs to the nlpA lipoprotein family
AMGAALFI_00205 3.6e-171 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
AMGAALFI_00206 1.7e-221 norA EGP Major facilitator Superfamily
AMGAALFI_00207 8.6e-44 1.3.5.4 S FMN binding
AMGAALFI_00208 4.9e-119 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AMGAALFI_00209 1.2e-266 yfnA E amino acid
AMGAALFI_00210 6.3e-257 gabT 2.6.1.19 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AMGAALFI_00212 1.8e-204 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
AMGAALFI_00213 0.0 helD 3.6.4.12 L DNA helicase
AMGAALFI_00214 1.7e-81 ndk 2.7.4.6 F Belongs to the NDK family
AMGAALFI_00215 1.3e-187 hpaIM 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
AMGAALFI_00216 9.1e-192 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
AMGAALFI_00217 6e-166 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
AMGAALFI_00218 1.3e-232 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
AMGAALFI_00219 1.1e-178
AMGAALFI_00220 4.2e-132 cobB K SIR2 family
AMGAALFI_00222 7.4e-163 yunF F Protein of unknown function DUF72
AMGAALFI_00223 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AMGAALFI_00224 1.5e-157 tatD L hydrolase, TatD family
AMGAALFI_00225 5e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
AMGAALFI_00226 3.8e-162 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
AMGAALFI_00227 6.8e-37 veg S Biofilm formation stimulator VEG
AMGAALFI_00228 3.1e-161 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
AMGAALFI_00229 1.3e-170 znuA P Belongs to the bacterial solute-binding protein 9 family
AMGAALFI_00230 7.7e-123 fhuC P ABC transporter
AMGAALFI_00231 3.2e-128 znuB U ABC 3 transport family
AMGAALFI_00232 6.9e-150 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
AMGAALFI_00233 1.5e-242 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AMGAALFI_00234 1.1e-178 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AMGAALFI_00235 5.6e-50
AMGAALFI_00236 4.1e-150 yxeH S hydrolase
AMGAALFI_00237 2.4e-272 ywfO S HD domain protein
AMGAALFI_00238 1.7e-156 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
AMGAALFI_00239 1.9e-61 L PFAM transposase IS200-family protein
AMGAALFI_00240 8.7e-231 L transposase, IS605 OrfB family
AMGAALFI_00241 2.1e-67 ywiB S Domain of unknown function (DUF1934)
AMGAALFI_00242 1.5e-47 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
AMGAALFI_00243 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
AMGAALFI_00244 5.1e-262 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
AMGAALFI_00245 8e-238 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AMGAALFI_00246 4.6e-41 rpmE2 J Ribosomal protein L31
AMGAALFI_00247 6.1e-241 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AMGAALFI_00248 2.7e-168 S Alpha/beta hydrolase of unknown function (DUF915)
AMGAALFI_00249 5.1e-125 srtA 3.4.22.70 M sortase family
AMGAALFI_00250 1e-139 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
AMGAALFI_00251 1.2e-163 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
AMGAALFI_00252 9.2e-121 pgm3 3.1.3.73 G Belongs to the phosphoglycerate mutase family
AMGAALFI_00253 8e-87 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AMGAALFI_00254 7e-93 lemA S LemA family
AMGAALFI_00255 8.9e-159 htpX O Belongs to the peptidase M48B family
AMGAALFI_00256 5.2e-259 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
AMGAALFI_00257 3.6e-253 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
AMGAALFI_00258 1.4e-153 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
AMGAALFI_00259 2.4e-167 glsA 3.5.1.2 E Belongs to the glutaminase family
AMGAALFI_00260 3.3e-85 L PFAM transposase IS200-family protein
AMGAALFI_00261 5.4e-264 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
AMGAALFI_00262 5.6e-255 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
AMGAALFI_00263 1.7e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
AMGAALFI_00264 2.7e-235 dltB M MBOAT, membrane-bound O-acyltransferase family
AMGAALFI_00265 2e-296 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
AMGAALFI_00267 4.5e-61 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
AMGAALFI_00268 7.9e-213 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AMGAALFI_00269 3.2e-62 L Toxic component of a toxin-antitoxin (TA) module
AMGAALFI_00270 3.1e-251 U Belongs to the purine-cytosine permease (2.A.39) family
AMGAALFI_00271 2.1e-243 codA 3.5.4.1 F cytosine deaminase
AMGAALFI_00272 3.1e-147 tesE Q hydratase
AMGAALFI_00273 3.6e-114 S (CBS) domain
AMGAALFI_00274 1.1e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
AMGAALFI_00275 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AMGAALFI_00276 1.6e-39 yabO J S4 domain protein
AMGAALFI_00277 2.3e-57 divIC D Septum formation initiator
AMGAALFI_00278 9.8e-67 yabR J RNA binding
AMGAALFI_00279 4.3e-269 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
AMGAALFI_00280 1.5e-97 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
AMGAALFI_00281 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AMGAALFI_00282 3.6e-171 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AMGAALFI_00283 2.2e-190 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AMGAALFI_00284 4.2e-294 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
AMGAALFI_00285 1.7e-88
AMGAALFI_00289 1.6e-66 XK27_01125 L PFAM IS66 Orf2 family protein
AMGAALFI_00290 3.2e-297 L Transposase IS66 family
AMGAALFI_00292 2.8e-19
AMGAALFI_00293 1.3e-263 dtpT U amino acid peptide transporter
AMGAALFI_00294 5.2e-161 yjjH S Calcineurin-like phosphoesterase
AMGAALFI_00297 1.5e-115
AMGAALFI_00298 9.7e-253 EGP Major facilitator Superfamily
AMGAALFI_00299 2.9e-304 aspT P Predicted Permease Membrane Region
AMGAALFI_00300 2.5e-132 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
AMGAALFI_00301 1.8e-127 gntR1 K UbiC transcription regulator-associated domain protein
AMGAALFI_00302 1.1e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AMGAALFI_00303 3.9e-153 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
AMGAALFI_00304 0.0 yhgF K Tex-like protein N-terminal domain protein
AMGAALFI_00305 8.6e-86 ydcK S Belongs to the SprT family
AMGAALFI_00307 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
AMGAALFI_00308 7.5e-188 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
AMGAALFI_00309 0.0 S Bacterial membrane protein, YfhO
AMGAALFI_00310 1.2e-134 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AMGAALFI_00311 6.3e-170 I alpha/beta hydrolase fold
AMGAALFI_00312 5.9e-216 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
AMGAALFI_00313 1.1e-119 tcyB E ABC transporter
AMGAALFI_00314 2.6e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
AMGAALFI_00315 1.5e-141 tcyA ET Belongs to the bacterial solute-binding protein 3 family
AMGAALFI_00316 5.4e-269 pepC 3.4.22.40 E Peptidase C1-like family
AMGAALFI_00317 2.6e-126 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AMGAALFI_00318 8.5e-50 HA62_12640 S GCN5-related N-acetyl-transferase
AMGAALFI_00319 2.3e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
AMGAALFI_00320 3.2e-256 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AMGAALFI_00321 1e-207 yacL S domain protein
AMGAALFI_00322 2.6e-274 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
AMGAALFI_00323 2.5e-71 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
AMGAALFI_00324 4.7e-137 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AMGAALFI_00325 1.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
AMGAALFI_00326 1.4e-15 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
AMGAALFI_00327 3.4e-97 nusG K Participates in transcription elongation, termination and antitermination
AMGAALFI_00328 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AMGAALFI_00329 3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
AMGAALFI_00330 7e-228 aadAT EK Aminotransferase, class I
AMGAALFI_00332 2.1e-249 M Glycosyl transferase family group 2
AMGAALFI_00333 2.7e-213 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
AMGAALFI_00334 1.7e-82 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AMGAALFI_00335 3.2e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
AMGAALFI_00336 3.4e-48
AMGAALFI_00338 2e-40 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
AMGAALFI_00339 1.1e-56 K transcriptional regulator PadR family
AMGAALFI_00340 6.2e-79 XK27_06920 S Protein of unknown function (DUF1700)
AMGAALFI_00341 1.1e-136 S Putative adhesin
AMGAALFI_00342 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
AMGAALFI_00343 1.2e-199 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AMGAALFI_00344 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AMGAALFI_00345 3.4e-35 nrdH O Glutaredoxin
AMGAALFI_00346 3.5e-91 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
AMGAALFI_00347 7.3e-309 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AMGAALFI_00348 7e-47 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AMGAALFI_00349 3.3e-109 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AMGAALFI_00350 9.7e-39 S Protein of unknown function (DUF2508)
AMGAALFI_00351 5.1e-116 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AMGAALFI_00352 7.6e-52 yaaQ S Cyclic-di-AMP receptor
AMGAALFI_00353 1.5e-186 holB 2.7.7.7 L DNA polymerase III
AMGAALFI_00354 1.6e-58 yabA L Involved in initiation control of chromosome replication
AMGAALFI_00355 1.5e-158 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AMGAALFI_00356 1.1e-141 fat 3.1.2.21 I Acyl-ACP thioesterase
AMGAALFI_00357 2.7e-285 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
AMGAALFI_00358 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
AMGAALFI_00359 6.6e-176 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
AMGAALFI_00360 1.5e-194 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
AMGAALFI_00361 1.2e-213 L PFAM Integrase catalytic region
AMGAALFI_00362 1.5e-32 L PFAM Integrase catalytic region
AMGAALFI_00363 6.3e-131 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
AMGAALFI_00364 1.5e-103 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
AMGAALFI_00365 1.9e-197 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AMGAALFI_00366 2.9e-134 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AMGAALFI_00367 3.5e-230 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
AMGAALFI_00368 1.4e-139 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
AMGAALFI_00369 3.6e-148 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
AMGAALFI_00370 4.3e-230 mtnE 2.6.1.83 E Aminotransferase
AMGAALFI_00371 1.9e-186 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AMGAALFI_00372 2.2e-311 L Transposase
AMGAALFI_00373 0.0 uup S ABC transporter, ATP-binding protein
AMGAALFI_00374 6.3e-114 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
AMGAALFI_00376 1.1e-43 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AMGAALFI_00377 1.9e-292 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
AMGAALFI_00378 4.2e-86 S Aminoacyl-tRNA editing domain
AMGAALFI_00379 4.3e-305 ybeC E amino acid
AMGAALFI_00380 0.0 ydaO E amino acid
AMGAALFI_00381 9.2e-40
AMGAALFI_00382 3.3e-68 rmaI K Transcriptional regulator
AMGAALFI_00383 1.3e-249 EGP Major facilitator Superfamily
AMGAALFI_00384 2e-112 yvyE 3.4.13.9 S YigZ family
AMGAALFI_00385 2.3e-259 comFA L Helicase C-terminal domain protein
AMGAALFI_00386 2.6e-126 comFC S Competence protein
AMGAALFI_00387 4.5e-97 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AMGAALFI_00388 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
AMGAALFI_00389 9.2e-189 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AMGAALFI_00390 2.4e-32 KT PspC domain protein
AMGAALFI_00391 4.9e-52 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
AMGAALFI_00392 4.6e-177 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
AMGAALFI_00393 1.3e-159 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AMGAALFI_00394 2.4e-184 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
AMGAALFI_00395 1.1e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
AMGAALFI_00396 2.4e-138 yrjD S LUD domain
AMGAALFI_00397 4.4e-296 lutB C 4Fe-4S dicluster domain
AMGAALFI_00398 1.9e-169 lutA C Cysteine-rich domain
AMGAALFI_00399 4.6e-174 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
AMGAALFI_00400 1.3e-221 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
AMGAALFI_00401 1.6e-165 aatB ET PFAM extracellular solute-binding protein, family 3
AMGAALFI_00402 9.1e-84 ykhA 3.1.2.20 I Thioesterase superfamily
AMGAALFI_00403 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
AMGAALFI_00404 2.3e-116 yfbR S HD containing hydrolase-like enzyme
AMGAALFI_00405 1.5e-13
AMGAALFI_00406 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
AMGAALFI_00407 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
AMGAALFI_00408 2.4e-245 steT E amino acid
AMGAALFI_00409 1.7e-162 rapZ S Displays ATPase and GTPase activities
AMGAALFI_00410 6.5e-187 ybhK S Required for morphogenesis under gluconeogenic growth conditions
AMGAALFI_00411 2.4e-170 whiA K May be required for sporulation
AMGAALFI_00413 8.8e-15
AMGAALFI_00414 2.1e-103 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
AMGAALFI_00415 1.5e-256 L Transposase
AMGAALFI_00416 3.5e-16 L Transposase
AMGAALFI_00418 1.1e-189 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
AMGAALFI_00419 7.1e-228 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
AMGAALFI_00420 4.8e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
AMGAALFI_00421 4.2e-250 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
AMGAALFI_00422 2.2e-311 L Transposase
AMGAALFI_00423 1.9e-245 yifK E Amino acid permease
AMGAALFI_00424 5.6e-294 clcA P chloride
AMGAALFI_00425 1.8e-34 secG U Preprotein translocase
AMGAALFI_00426 2.1e-148 est 3.1.1.1 S Serine aminopeptidase, S33
AMGAALFI_00427 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
AMGAALFI_00428 1.4e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
AMGAALFI_00429 6.3e-105 yxjI
AMGAALFI_00430 6.2e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AMGAALFI_00431 3.8e-179 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
AMGAALFI_00432 5.9e-82 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
AMGAALFI_00433 6.1e-88 K Acetyltransferase (GNAT) domain
AMGAALFI_00434 8.9e-77 S PAS domain
AMGAALFI_00435 9.3e-103 dnaQ 2.7.7.7 L DNA polymerase III
AMGAALFI_00436 7.3e-169 murB 1.3.1.98 M Cell wall formation
AMGAALFI_00437 1.2e-166 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMGAALFI_00438 6e-67 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
AMGAALFI_00439 3.7e-249 fucP G Major Facilitator Superfamily
AMGAALFI_00440 5e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
AMGAALFI_00441 1.2e-126 ybbR S YbbR-like protein
AMGAALFI_00442 8.5e-254 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AMGAALFI_00443 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
AMGAALFI_00444 8.7e-53
AMGAALFI_00445 0.0 oatA I Acyltransferase
AMGAALFI_00446 2.1e-79 K Transcriptional regulator
AMGAALFI_00447 8.9e-150 XK27_02985 S Cof-like hydrolase
AMGAALFI_00448 1.8e-78 lytE M Lysin motif
AMGAALFI_00450 3.8e-136 K response regulator
AMGAALFI_00451 8.1e-274 yclK 2.7.13.3 T Histidine kinase
AMGAALFI_00452 5.7e-155 glcU U sugar transport
AMGAALFI_00453 1.4e-102 lacA 2.3.1.79 S Transferase hexapeptide repeat
AMGAALFI_00454 5.3e-264 pgi 5.3.1.9 G Belongs to the GPI family
AMGAALFI_00455 2.1e-26
AMGAALFI_00457 5.6e-32 xylB 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
AMGAALFI_00458 9.7e-85 L PFAM transposase IS200-family protein
AMGAALFI_00459 2.5e-155 KT YcbB domain
AMGAALFI_00460 2.6e-191 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AMGAALFI_00461 1.5e-172 arcC 2.7.2.2 E Belongs to the carbamate kinase family
AMGAALFI_00462 3.2e-164 EG EamA-like transporter family
AMGAALFI_00463 2e-103 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
AMGAALFI_00464 7.6e-48 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
AMGAALFI_00465 6.3e-50 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
AMGAALFI_00466 0.0 copA 3.6.3.54 P P-type ATPase
AMGAALFI_00467 1.6e-90
AMGAALFI_00469 3.6e-57
AMGAALFI_00470 1.1e-240 yjcE P Sodium proton antiporter
AMGAALFI_00474 1.7e-237 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMGAALFI_00475 2.1e-66
AMGAALFI_00477 4.8e-72
AMGAALFI_00479 5.3e-08 L DnaD domain protein
AMGAALFI_00482 1.6e-140 L hmm pf00665
AMGAALFI_00483 5.8e-106 L Helix-turn-helix domain
AMGAALFI_00484 4.5e-26
AMGAALFI_00485 1.1e-197 ampC V Beta-lactamase
AMGAALFI_00486 4.1e-239 arcA 3.5.3.6 E Arginine
AMGAALFI_00487 1.2e-79 argR K Regulates arginine biosynthesis genes
AMGAALFI_00488 6.8e-262 E Arginine ornithine antiporter
AMGAALFI_00489 1.6e-226 arcD U Amino acid permease
AMGAALFI_00490 1.1e-135 cobQ S CobB/CobQ-like glutamine amidotransferase domain
AMGAALFI_00491 8.9e-264 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain
AMGAALFI_00492 6e-108 tdk 2.7.1.21 F thymidine kinase
AMGAALFI_00493 1.2e-194 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AMGAALFI_00494 1.4e-169 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
AMGAALFI_00495 1.2e-196 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
AMGAALFI_00496 9.8e-233 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AMGAALFI_00497 6.6e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AMGAALFI_00498 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AMGAALFI_00499 3.3e-195 yibE S overlaps another CDS with the same product name
AMGAALFI_00500 1.8e-131 yibF S overlaps another CDS with the same product name
AMGAALFI_00501 5.9e-233 pyrP F Permease
AMGAALFI_00502 7.3e-124 atpB C it plays a direct role in the translocation of protons across the membrane
AMGAALFI_00503 1.5e-14 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AMGAALFI_00504 1.1e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AMGAALFI_00505 5.1e-93 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AMGAALFI_00506 4e-284 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AMGAALFI_00507 1.9e-164 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AMGAALFI_00508 1.1e-267 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AMGAALFI_00509 1.6e-68 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
AMGAALFI_00510 1.3e-33 ywzB S Protein of unknown function (DUF1146)
AMGAALFI_00511 6.5e-243 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AMGAALFI_00512 1.9e-178 mbl D Cell shape determining protein MreB Mrl
AMGAALFI_00513 4.4e-41 yidD S Could be involved in insertion of integral membrane proteins into the membrane
AMGAALFI_00514 2.7e-32 S Protein of unknown function (DUF2969)
AMGAALFI_00515 1.1e-220 rodA D Belongs to the SEDS family
AMGAALFI_00516 1e-47 gcvH E glycine cleavage
AMGAALFI_00517 7.3e-261 S Uncharacterised protein family (UPF0236)
AMGAALFI_00518 6.3e-218 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
AMGAALFI_00519 1.6e-149 2.3.1.19 K Helix-turn-helix XRE-family like proteins
AMGAALFI_00520 5.2e-262 araP U Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
AMGAALFI_00521 0.0 araB 2.7.1.12, 2.7.1.16 G carbohydrate kinase FGGY
AMGAALFI_00522 3.7e-139 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
AMGAALFI_00523 8.8e-286 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
AMGAALFI_00524 2e-100 maa 2.3.1.79 S Maltose O-acetyltransferase
AMGAALFI_00525 2.2e-159 ytbE 1.1.1.346 S Aldo keto reductase
AMGAALFI_00526 1.5e-208 araR K Transcriptional regulator
AMGAALFI_00527 4.3e-83 usp6 T universal stress protein
AMGAALFI_00528 4.4e-46
AMGAALFI_00529 3.4e-244 rarA L recombination factor protein RarA
AMGAALFI_00530 1.7e-87 yueI S Protein of unknown function (DUF1694)
AMGAALFI_00531 1e-20
AMGAALFI_00532 1.6e-75 4.4.1.5 E Glyoxalase
AMGAALFI_00533 2.5e-138 S Membrane
AMGAALFI_00534 1.1e-141 S Belongs to the UPF0246 family
AMGAALFI_00535 0.0 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
AMGAALFI_00536 6.7e-164 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
AMGAALFI_00537 3.3e-85 L PFAM transposase IS200-family protein
AMGAALFI_00538 7.3e-85 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
AMGAALFI_00539 3.5e-263 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
AMGAALFI_00540 1.1e-235 pbuG S permease
AMGAALFI_00541 3.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AMGAALFI_00542 9e-253 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
AMGAALFI_00543 7e-217 iscS2 2.8.1.7 E Aminotransferase class V
AMGAALFI_00544 8.5e-229 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AMGAALFI_00545 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
AMGAALFI_00546 1.5e-272 cydA 1.10.3.14 C ubiquinol oxidase
AMGAALFI_00547 3.3e-186 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
AMGAALFI_00548 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
AMGAALFI_00549 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AMGAALFI_00550 4.8e-232 ndh 1.6.99.3 C NADH dehydrogenase
AMGAALFI_00551 9.4e-250 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
AMGAALFI_00552 1.2e-122 radC L DNA repair protein
AMGAALFI_00553 1.7e-179 mreB D cell shape determining protein MreB
AMGAALFI_00554 5.9e-152 mreC M Involved in formation and maintenance of cell shape
AMGAALFI_00555 8.7e-93 mreD M rod shape-determining protein MreD
AMGAALFI_00556 3.2e-102 glnP P ABC transporter permease
AMGAALFI_00557 1.2e-117 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
AMGAALFI_00558 1.5e-160 aatB ET ABC transporter substrate-binding protein
AMGAALFI_00559 4.2e-231 ymfF S Peptidase M16 inactive domain protein
AMGAALFI_00560 2.4e-250 ymfH S Peptidase M16
AMGAALFI_00561 1.9e-141 ymfM S Helix-turn-helix domain
AMGAALFI_00562 2.5e-101 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AMGAALFI_00563 3.4e-233 cinA 3.5.1.42 S Belongs to the CinA family
AMGAALFI_00564 7.6e-197 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AMGAALFI_00565 9.5e-209 rny S Endoribonuclease that initiates mRNA decay
AMGAALFI_00566 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AMGAALFI_00567 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AMGAALFI_00568 1.8e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
AMGAALFI_00569 1.2e-191 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
AMGAALFI_00570 2.2e-204 tgt_1 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
AMGAALFI_00571 1.5e-29 yajC U Preprotein translocase
AMGAALFI_00572 3.2e-183 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
AMGAALFI_00573 1.7e-233 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
AMGAALFI_00574 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AMGAALFI_00575 4.1e-43 yrzL S Belongs to the UPF0297 family
AMGAALFI_00576 3.6e-76 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AMGAALFI_00577 6.1e-48 yrzB S Belongs to the UPF0473 family
AMGAALFI_00578 1.6e-86 cvpA S Colicin V production protein
AMGAALFI_00579 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
AMGAALFI_00580 6.1e-54 trxA O Belongs to the thioredoxin family
AMGAALFI_00581 4.1e-98 yslB S Protein of unknown function (DUF2507)
AMGAALFI_00582 1.1e-147 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
AMGAALFI_00583 1.8e-107 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AMGAALFI_00584 2.1e-96 S Phosphoesterase
AMGAALFI_00585 2.7e-76 ykuL S (CBS) domain
AMGAALFI_00586 1.2e-154 3.1.3.102, 3.1.3.104, 3.1.3.23 S haloacid dehalogenase-like hydrolase
AMGAALFI_00587 2.1e-149 ykuT M mechanosensitive ion channel
AMGAALFI_00588 6.5e-38 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
AMGAALFI_00589 1.8e-14
AMGAALFI_00590 1.2e-213 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
AMGAALFI_00591 4.5e-183 ccpA K catabolite control protein A
AMGAALFI_00592 1.8e-137
AMGAALFI_00593 3.5e-132 yebC K Transcriptional regulatory protein
AMGAALFI_00594 7.9e-185 comGA NU Type II IV secretion system protein
AMGAALFI_00595 2.3e-187 comGB NU type II secretion system
AMGAALFI_00596 7.1e-47 comGC U competence protein ComGC
AMGAALFI_00597 1.5e-79 NU general secretion pathway protein
AMGAALFI_00598 4.8e-45
AMGAALFI_00599 3.6e-73
AMGAALFI_00601 5.9e-146 ytxK 2.1.1.72 L N-6 DNA Methylase
AMGAALFI_00602 1.1e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AMGAALFI_00603 8.8e-118 S Calcineurin-like phosphoesterase
AMGAALFI_00604 4.4e-100 yutD S Protein of unknown function (DUF1027)
AMGAALFI_00605 2.7e-140 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
AMGAALFI_00606 2.8e-114 S Protein of unknown function (DUF1461)
AMGAALFI_00607 5.5e-110 dedA S SNARE-like domain protein
AMGAALFI_00629 1.7e-237 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMGAALFI_00630 1.8e-76 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
AMGAALFI_00631 2.7e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
AMGAALFI_00632 1.4e-121 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
AMGAALFI_00633 3.8e-206 coiA 3.6.4.12 S Competence protein
AMGAALFI_00634 1.5e-269 pipD E Dipeptidase
AMGAALFI_00635 5.1e-116 yjbH Q Thioredoxin
AMGAALFI_00636 4e-116 yjbM 2.7.6.5 S RelA SpoT domain protein
AMGAALFI_00637 2.7e-154 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AMGAALFI_00638 2.4e-175 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
AMGAALFI_00641 7.8e-296 L Transposase IS66 family
AMGAALFI_00642 5.4e-67 XK27_01125 L PFAM IS66 Orf2 family protein
AMGAALFI_00644 7e-184 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
AMGAALFI_00645 4.4e-163 rrmA 2.1.1.187 H Methyltransferase
AMGAALFI_00646 4.7e-96 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
AMGAALFI_00647 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
AMGAALFI_00648 1.2e-10 S Protein of unknown function (DUF4044)
AMGAALFI_00649 7.8e-58
AMGAALFI_00650 3.1e-77 mraZ K Belongs to the MraZ family
AMGAALFI_00651 1.9e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
AMGAALFI_00652 1.5e-56 ftsL D Cell division protein FtsL
AMGAALFI_00653 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
AMGAALFI_00654 2.6e-180 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AMGAALFI_00655 2.7e-263 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AMGAALFI_00656 9.2e-206 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AMGAALFI_00657 3.2e-150 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
AMGAALFI_00658 2.9e-254 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
AMGAALFI_00659 5.3e-226 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AMGAALFI_00660 1.2e-70 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
AMGAALFI_00661 8.3e-41 yggT S YGGT family
AMGAALFI_00662 1.3e-145 ylmH S S4 domain protein
AMGAALFI_00663 6.4e-38 divIVA D DivIVA domain protein
AMGAALFI_00664 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AMGAALFI_00665 4.2e-32 cspA K Cold shock protein
AMGAALFI_00666 1.1e-98 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
AMGAALFI_00668 1e-125 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AMGAALFI_00669 2.9e-218 iscS 2.8.1.7 E Aminotransferase class V
AMGAALFI_00670 7.5e-58 XK27_04120 S Putative amino acid metabolism
AMGAALFI_00671 1.8e-225 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
AMGAALFI_00672 3.4e-123 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
AMGAALFI_00673 3.4e-118 S Repeat protein
AMGAALFI_00674 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
AMGAALFI_00675 2.8e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AMGAALFI_00676 2.7e-188 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AMGAALFI_00677 7.2e-261 lysC 2.7.2.4 E Belongs to the aspartokinase family
AMGAALFI_00678 1e-251 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
AMGAALFI_00679 2.1e-78 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
AMGAALFI_00680 7e-225 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
AMGAALFI_00681 1.6e-174 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AMGAALFI_00682 2.3e-142 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
AMGAALFI_00683 2.6e-222 patA 2.6.1.1 E Aminotransferase
AMGAALFI_00684 6.1e-199 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AMGAALFI_00685 1.4e-32 KT Putative sugar diacid recognition
AMGAALFI_00686 2.9e-27 KT Putative sugar diacid recognition
AMGAALFI_00687 5.9e-220 EG GntP family permease
AMGAALFI_00688 1.5e-211 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
AMGAALFI_00689 7.7e-58
AMGAALFI_00691 3.7e-143 mltD CBM50 M NlpC P60 family protein
AMGAALFI_00692 5.7e-29
AMGAALFI_00693 3.8e-184 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic
AMGAALFI_00694 9.8e-32 ykzG S Belongs to the UPF0356 family
AMGAALFI_00695 3.6e-82
AMGAALFI_00696 5.6e-103 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
AMGAALFI_00697 3e-209 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
AMGAALFI_00698 6.2e-182 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
AMGAALFI_00699 9.9e-231 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
AMGAALFI_00700 1.4e-275 lpdA 1.8.1.4 C Dehydrogenase
AMGAALFI_00701 6.1e-48 yktA S Belongs to the UPF0223 family
AMGAALFI_00702 5.7e-138 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
AMGAALFI_00703 0.0 typA T GTP-binding protein TypA
AMGAALFI_00704 8.2e-224 ftsW D Belongs to the SEDS family
AMGAALFI_00705 1e-44 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
AMGAALFI_00706 3.8e-99 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
AMGAALFI_00707 5.1e-90 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AMGAALFI_00708 7.1e-200 ylbL T Belongs to the peptidase S16 family
AMGAALFI_00709 8.1e-82 comEA L Competence protein ComEA
AMGAALFI_00710 3.1e-89 comEB 3.5.4.12 F ComE operon protein 2
AMGAALFI_00711 0.0 comEC S Competence protein ComEC
AMGAALFI_00712 2.5e-149 holA 2.7.7.7 L DNA polymerase III delta subunit
AMGAALFI_00713 5.1e-35 rpsT J Binds directly to 16S ribosomal RNA
AMGAALFI_00714 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AMGAALFI_00715 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AMGAALFI_00716 4.9e-165 S Tetratricopeptide repeat
AMGAALFI_00717 3.8e-226 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AMGAALFI_00718 2.8e-238 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
AMGAALFI_00719 6.2e-235 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AMGAALFI_00720 3.6e-108 engB D Necessary for normal cell division and for the maintenance of normal septation
AMGAALFI_00721 6.1e-60 MA20_27270 S mazG nucleotide pyrophosphohydrolase
AMGAALFI_00722 7.6e-09
AMGAALFI_00723 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
AMGAALFI_00724 1.2e-249 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AMGAALFI_00725 9.8e-177 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
AMGAALFI_00726 2e-157 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
AMGAALFI_00727 1.3e-81 recJ L Single-stranded-DNA-specific exonuclease RecJ
AMGAALFI_00731 1.2e-274 S Phage plasmid primase, P4
AMGAALFI_00732 5e-12 S head-tail joining protein
AMGAALFI_00734 1.2e-85 L HNH nucleases
AMGAALFI_00736 2.1e-79 terS L Phage terminase, small subunit
AMGAALFI_00737 0.0 terL S overlaps another CDS with the same product name
AMGAALFI_00739 3.4e-208 S Phage portal protein
AMGAALFI_00740 2.3e-284 S Caudovirus prohead serine protease
AMGAALFI_00741 1.5e-76 S Transcriptional regulator, RinA family
AMGAALFI_00742 1.6e-45 S Phage gp6-like head-tail connector protein
AMGAALFI_00744 8.4e-130 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AMGAALFI_00745 1.5e-214 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
AMGAALFI_00746 5.5e-115 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AMGAALFI_00747 1.3e-35 ynzC S UPF0291 protein
AMGAALFI_00748 9.8e-30 yneF S Uncharacterised protein family (UPF0154)
AMGAALFI_00749 1.6e-117 plsC 2.3.1.51 I Acyltransferase
AMGAALFI_00750 3.7e-142 yabB 2.1.1.223 L Methyltransferase small domain
AMGAALFI_00751 5.4e-49 yazA L GIY-YIG catalytic domain protein
AMGAALFI_00752 5.2e-184 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMGAALFI_00753 1.2e-143 rpsB J Belongs to the universal ribosomal protein uS2 family
AMGAALFI_00754 2.4e-153 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AMGAALFI_00755 2e-129 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
AMGAALFI_00756 7.4e-95 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
AMGAALFI_00757 3.5e-263 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
AMGAALFI_00758 3.3e-85 L PFAM transposase IS200-family protein
AMGAALFI_00759 4.5e-143 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AMGAALFI_00760 3.4e-138 cdsA 2.7.7.41 I Belongs to the CDS family
AMGAALFI_00761 9.8e-236 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
AMGAALFI_00762 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
AMGAALFI_00763 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AMGAALFI_00764 1.4e-83 rimP J Required for maturation of 30S ribosomal subunits
AMGAALFI_00765 1.2e-216 nusA K Participates in both transcription termination and antitermination
AMGAALFI_00766 1e-44 ylxR K Protein of unknown function (DUF448)
AMGAALFI_00767 4.5e-49 ylxQ J ribosomal protein
AMGAALFI_00768 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AMGAALFI_00769 2.1e-58 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AMGAALFI_00770 1.2e-168 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AMGAALFI_00771 1.9e-180 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
AMGAALFI_00772 2e-64
AMGAALFI_00773 1.1e-195 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
AMGAALFI_00774 1.2e-76 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AMGAALFI_00775 0.0 dnaK O Heat shock 70 kDa protein
AMGAALFI_00776 5.1e-199 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
AMGAALFI_00777 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
AMGAALFI_00778 5.4e-225 3.6.4.12 L Belongs to the 'phage' integrase family
AMGAALFI_00779 8.1e-142
AMGAALFI_00780 6.4e-13
AMGAALFI_00781 4.7e-76
AMGAALFI_00782 1e-81
AMGAALFI_00783 1.4e-10 3.4.21.88 K Peptidase S24-like
AMGAALFI_00784 9.2e-24 3.4.21.88 K Peptidase S24-like
AMGAALFI_00785 7.9e-279 pipD E Dipeptidase
AMGAALFI_00786 1.7e-201 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
AMGAALFI_00787 8e-174 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
AMGAALFI_00789 7.5e-58
AMGAALFI_00790 1.6e-182 prmA J Ribosomal protein L11 methyltransferase
AMGAALFI_00791 1.3e-131 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
AMGAALFI_00792 9.3e-53
AMGAALFI_00793 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AMGAALFI_00794 1.4e-77 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
AMGAALFI_00795 2.8e-170 yniA G Phosphotransferase enzyme family
AMGAALFI_00796 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
AMGAALFI_00797 3.3e-85 L PFAM transposase IS200-family protein
AMGAALFI_00798 8.2e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
AMGAALFI_00799 2.8e-266 glnPH2 P ABC transporter permease
AMGAALFI_00800 1.2e-23 rpsU J Belongs to the bacterial ribosomal protein bS21 family
AMGAALFI_00801 2.9e-70 yqeY S YqeY-like protein
AMGAALFI_00802 1.7e-187 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
AMGAALFI_00803 9.1e-239 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
AMGAALFI_00804 1.7e-265 argH 4.3.2.1 E argininosuccinate lyase
AMGAALFI_00805 4.6e-92 bioY S BioY family
AMGAALFI_00806 2.4e-181 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
AMGAALFI_00807 5.3e-184 phoH T phosphate starvation-inducible protein PhoH
AMGAALFI_00808 1.9e-83 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AMGAALFI_00809 1.5e-62 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
AMGAALFI_00810 5.1e-170 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AMGAALFI_00811 2.3e-147 recO L Involved in DNA repair and RecF pathway recombination
AMGAALFI_00812 7e-181 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
AMGAALFI_00813 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
AMGAALFI_00814 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
AMGAALFI_00815 7.7e-208 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
AMGAALFI_00816 1.4e-220 patA 2.6.1.1 E Aminotransferase
AMGAALFI_00817 7.3e-261 S Uncharacterised protein family (UPF0236)
AMGAALFI_00818 2.9e-128 trmK 2.1.1.217 S SAM-dependent methyltransferase
AMGAALFI_00819 2.8e-159 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AMGAALFI_00820 5.4e-239 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
AMGAALFI_00821 1.8e-30 S Protein of unknown function (DUF2929)
AMGAALFI_00822 0.0 dnaE 2.7.7.7 L DNA polymerase
AMGAALFI_00823 2.1e-271 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
AMGAALFI_00824 1.6e-168 cvfB S S1 domain
AMGAALFI_00825 5.7e-166 xerD D recombinase XerD
AMGAALFI_00826 1.1e-64 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
AMGAALFI_00827 1.9e-141 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
AMGAALFI_00828 1.2e-106 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AMGAALFI_00829 1.2e-129 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
AMGAALFI_00830 5.3e-104 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
AMGAALFI_00831 8e-196 ypbB 5.1.3.1 S Helix-turn-helix domain
AMGAALFI_00832 1e-273 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
AMGAALFI_00833 2.5e-13 M Lysin motif
AMGAALFI_00834 6.9e-119 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
AMGAALFI_00835 1.4e-205 rpsA 1.17.7.4 J Ribosomal protein S1
AMGAALFI_00836 7.2e-250 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
AMGAALFI_00837 2.6e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
AMGAALFI_00838 3.9e-237 S Tetratricopeptide repeat protein
AMGAALFI_00839 2.3e-226 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
AMGAALFI_00840 0.0 yfmR S ABC transporter, ATP-binding protein
AMGAALFI_00841 5.9e-193 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AMGAALFI_00842 5.1e-92 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AMGAALFI_00843 5.3e-113 hlyIII S protein, hemolysin III
AMGAALFI_00844 8.1e-154 DegV S EDD domain protein, DegV family
AMGAALFI_00845 3.3e-172 ypmR E lipolytic protein G-D-S-L family
AMGAALFI_00846 7.4e-109 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
AMGAALFI_00847 1.2e-35 yozE S Belongs to the UPF0346 family
AMGAALFI_00848 6.4e-162 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AMGAALFI_00849 1.2e-143 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AMGAALFI_00850 3.1e-164 dprA LU DNA protecting protein DprA
AMGAALFI_00851 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AMGAALFI_00852 1.2e-171 lacX 5.1.3.3 G Aldose 1-epimerase
AMGAALFI_00853 1.5e-107 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
AMGAALFI_00854 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
AMGAALFI_00855 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
AMGAALFI_00856 8.9e-86 F NUDIX domain
AMGAALFI_00857 3.9e-173 ppaC 3.6.1.1 C inorganic pyrophosphatase
AMGAALFI_00858 1.2e-190 L PFAM Integrase catalytic region
AMGAALFI_00859 8.3e-69 yqkB S Belongs to the HesB IscA family
AMGAALFI_00860 3.8e-32
AMGAALFI_00862 4.4e-91 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
AMGAALFI_00863 1.1e-62 asp S Asp23 family, cell envelope-related function
AMGAALFI_00864 2.1e-25
AMGAALFI_00865 2.9e-96
AMGAALFI_00866 1.8e-292 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
AMGAALFI_00867 1.4e-184 K Transcriptional regulator, LacI family
AMGAALFI_00868 9.1e-201 gntT EG Gluconate
AMGAALFI_00869 2.7e-238 int L COG1961 Site-specific recombinases, DNA invertase Pin homologs
AMGAALFI_00870 2.6e-139
AMGAALFI_00872 8e-75
AMGAALFI_00873 1.6e-70 S Pfam:DUF955
AMGAALFI_00874 3e-47 3.4.21.88 K Helix-turn-helix domain
AMGAALFI_00875 3.4e-32 K Helix-turn-helix XRE-family like proteins
AMGAALFI_00876 4.7e-140 K BRO family, N-terminal domain
AMGAALFI_00879 6.5e-33
AMGAALFI_00884 1.3e-165 recT L RecT family
AMGAALFI_00885 4.9e-164 pi112 3.6.4.12 L PDDEXK-like domain of unknown function (DUF3799)
AMGAALFI_00886 7e-153 L Psort location Cytoplasmic, score
AMGAALFI_00887 3.8e-59
AMGAALFI_00896 1.3e-07
AMGAALFI_00899 8.9e-77
AMGAALFI_00900 7.8e-157
AMGAALFI_00902 3.3e-85 L PFAM transposase IS200-family protein
AMGAALFI_00903 1.5e-09
AMGAALFI_00904 3.8e-88 L HNH nucleases
AMGAALFI_00905 5e-84 L Phage terminase, small subunit
AMGAALFI_00907 1.5e-09
AMGAALFI_00908 0.0 S Phage Terminase
AMGAALFI_00909 4e-223 S Phage portal protein
AMGAALFI_00910 2.3e-128 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
AMGAALFI_00911 3.6e-208 S Phage capsid family
AMGAALFI_00912 4.6e-61 S Phage gp6-like head-tail connector protein
AMGAALFI_00913 1.2e-58 S Phage head-tail joining protein
AMGAALFI_00914 5.5e-71 S Bacteriophage HK97-gp10, putative tail-component
AMGAALFI_00915 3.4e-67 S Protein of unknown function (DUF806)
AMGAALFI_00916 4.2e-135 S Phage tail tube protein
AMGAALFI_00917 1.1e-62 S Phage tail assembly chaperone proteins, TAC
AMGAALFI_00918 0.0 M Phage tail tape measure protein TP901
AMGAALFI_00919 7.6e-160 S Phage tail protein
AMGAALFI_00920 0.0 spr M Prophage endopeptidase tail
AMGAALFI_00921 1.3e-15 spoIVFA GT2,GT4 D peptidase
AMGAALFI_00924 2.8e-32 S GDSL-like Lipase/Acylhydrolase
AMGAALFI_00925 2.8e-210
AMGAALFI_00928 1.5e-76
AMGAALFI_00930 4.5e-36
AMGAALFI_00931 1.1e-59 hol S COG5546 Small integral membrane protein
AMGAALFI_00932 7.4e-177 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
AMGAALFI_00933 3.3e-85 L PFAM transposase IS200-family protein
AMGAALFI_00934 7.7e-35
AMGAALFI_00935 4.4e-55 S Mazg nucleotide pyrophosphohydrolase
AMGAALFI_00936 8.8e-161 xth 3.1.11.2 L exodeoxyribonuclease III
AMGAALFI_00937 3.5e-263 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
AMGAALFI_00938 5e-84
AMGAALFI_00939 2.2e-190 lacR K Transcriptional regulator
AMGAALFI_00940 0.0 lacS G Transporter
AMGAALFI_00941 0.0 lacZ 3.2.1.23 G -beta-galactosidase
AMGAALFI_00942 1.5e-180 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
AMGAALFI_00943 6.8e-159 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
AMGAALFI_00944 1.3e-144 XK27_00940 1.2.1.70, 3.5.1.9 S Putative cyclase
AMGAALFI_00945 7.7e-224 yxjG_1 E methionine synthase, vitamin-B12 independent
AMGAALFI_00946 2.8e-131 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
AMGAALFI_00947 8.2e-224 mdtG EGP Major facilitator Superfamily
AMGAALFI_00948 1.2e-168 T Calcineurin-like phosphoesterase superfamily domain
AMGAALFI_00949 7e-43 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AMGAALFI_00952 1.2e-123 sdaAB 4.3.1.17 E Serine dehydratase beta chain
AMGAALFI_00953 3e-143 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
AMGAALFI_00954 1.2e-105 ahpC 1.11.1.15 O Peroxiredoxin
AMGAALFI_00955 0.0 trxB2 1.8.1.9 C Thioredoxin domain
AMGAALFI_00956 1.5e-163 L hmm pf00665
AMGAALFI_00957 2.5e-127 L Helix-turn-helix domain
AMGAALFI_00958 6.7e-278 pipD E Dipeptidase
AMGAALFI_00959 0.0 yjbQ P TrkA C-terminal domain protein
AMGAALFI_00960 2.7e-25 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
AMGAALFI_00961 5.4e-294 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AMGAALFI_00962 4e-92
AMGAALFI_00963 1.7e-37
AMGAALFI_00964 1.2e-105 K DNA-templated transcription, initiation
AMGAALFI_00965 4e-28
AMGAALFI_00966 1.2e-60 L PFAM transposase IS200-family protein
AMGAALFI_00967 3.3e-230 L transposase, IS605 OrfB family
AMGAALFI_00968 2e-94
AMGAALFI_00969 2.2e-69 K Transcriptional regulator, HxlR family
AMGAALFI_00970 2.3e-171 brpA K Cell envelope-like function transcriptional attenuator common domain protein
AMGAALFI_00971 6e-22 epsB M biosynthesis protein
AMGAALFI_00972 7.9e-168 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
AMGAALFI_00973 1.8e-161 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
AMGAALFI_00974 2.8e-264 S Protein of unknown function (DUF2971)
AMGAALFI_00975 0.0 S KAP family P-loop domain
AMGAALFI_00976 2.3e-306 S AAA domain, putative AbiEii toxin, Type IV TA system
AMGAALFI_00977 4.8e-207 3.6.4.12 L DNA helicase
AMGAALFI_00978 3.1e-231 L Integrase core domain
AMGAALFI_00979 1.3e-139 L Bacterial dnaA protein
AMGAALFI_00980 7e-159
AMGAALFI_00981 1.2e-190 L PFAM Integrase catalytic region
AMGAALFI_00982 1.3e-70 O Preprotein translocase subunit SecB
AMGAALFI_00983 1.9e-175 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
AMGAALFI_00984 4.8e-252 mmuP E amino acid
AMGAALFI_00986 3.2e-11 K transcriptional regulator
AMGAALFI_00987 9.6e-149 S Protein of unknown function (DUF3800)
AMGAALFI_00989 0.0 snf 2.7.11.1 KL domain protein
AMGAALFI_00990 6.6e-159 snf 2.7.11.1 KL domain protein
AMGAALFI_00991 1.7e-145 ywqE 3.1.3.48 GM PHP domain protein
AMGAALFI_00992 3e-212 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
AMGAALFI_00993 0.0 sbcC L Putative exonuclease SbcCD, C subunit
AMGAALFI_00994 8.4e-93 L nuclease
AMGAALFI_00995 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
AMGAALFI_00996 5.1e-69
AMGAALFI_00997 7.5e-103 fic D Fic/DOC family
AMGAALFI_00998 2.2e-128 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
AMGAALFI_00999 1.5e-152 3.1.3.73 G Belongs to the phosphoglycerate mutase family
AMGAALFI_01000 8.4e-31
AMGAALFI_01001 2.8e-185
AMGAALFI_01002 1.7e-23
AMGAALFI_01003 1.8e-289 L Transposase IS66 family
AMGAALFI_01004 2.3e-65 XK27_01125 L PFAM IS66 Orf2 family protein
AMGAALFI_01006 8.7e-116 lssY 3.6.1.27 I Acid phosphatase homologues
AMGAALFI_01007 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
AMGAALFI_01008 4.2e-231 clcA_2 P Chloride transporter, ClC family
AMGAALFI_01009 6.5e-119 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
AMGAALFI_01010 4.8e-151 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
AMGAALFI_01011 4e-142 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
AMGAALFI_01012 1.6e-51
AMGAALFI_01013 0.0 S SEC-C Motif Domain Protein
AMGAALFI_01014 1.7e-295 L Transposase IS66 family
AMGAALFI_01015 1.1e-52 XK27_01125 L PFAM IS66 Orf2 family protein
AMGAALFI_01017 5.9e-88 flp 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
AMGAALFI_01018 1.2e-76
AMGAALFI_01019 1.2e-180
AMGAALFI_01020 3.3e-85 L PFAM transposase IS200-family protein
AMGAALFI_01021 2.8e-44 L transposase and inactivated derivatives, IS30 family
AMGAALFI_01022 5.6e-126 L PFAM Integrase catalytic region
AMGAALFI_01023 9.6e-91 UW LPXTG-motif cell wall anchor domain protein
AMGAALFI_01024 2.9e-257 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
AMGAALFI_01025 7.2e-81 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
AMGAALFI_01026 9.6e-75 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
AMGAALFI_01027 5.9e-120 L PFAM Integrase catalytic region
AMGAALFI_01028 8.5e-174 fecB P Periplasmic binding protein
AMGAALFI_01029 6.3e-137 fecE 3.6.3.34 HP AAA domain, putative AbiEii toxin, Type IV TA system
AMGAALFI_01030 1.8e-128 fecD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AMGAALFI_01031 3.6e-76 S Flavodoxin
AMGAALFI_01032 2.5e-64 moaE 2.8.1.12 H MoaE protein
AMGAALFI_01033 4.9e-35 moaD 2.8.1.12 H ThiS family
AMGAALFI_01034 3.9e-218 narK P Transporter, major facilitator family protein
AMGAALFI_01035 1.7e-165 hepT 2.5.1.30, 2.5.1.90 H geranyltranstransferase activity
AMGAALFI_01036 1.4e-181
AMGAALFI_01037 1.6e-18
AMGAALFI_01038 2.6e-115 nreC K PFAM regulatory protein LuxR
AMGAALFI_01039 5.1e-190 comP 2.7.13.3 F Sensor histidine kinase
AMGAALFI_01040 5.1e-44
AMGAALFI_01041 4.7e-105 mobA 2.7.7.77 H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
AMGAALFI_01042 7.9e-85 mobB 2.10.1.1, 2.7.7.77 H molybdopterin-guanine dinucleotide biosynthesis protein
AMGAALFI_01043 3.2e-228 moeA 2.10.1.1 H MoeA N-terminal region (domain I and II)
AMGAALFI_01044 3.1e-84 moaB 2.7.7.75 H May be involved in the biosynthesis of molybdopterin
AMGAALFI_01045 1.1e-189 moeB 2.7.7.73, 2.7.7.80 H ThiF family
AMGAALFI_01046 0.0 narG 1.7.5.1 C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
AMGAALFI_01047 0.0 narH 1.7.5.1 C 4Fe-4S dicluster domain
AMGAALFI_01048 7.9e-100 narJ C nitrate reductase molybdenum cofactor assembly chaperone
AMGAALFI_01049 2.5e-129 narI 1.7.5.1 C Nitrate reductase
AMGAALFI_01050 1.1e-236 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMGAALFI_01051 2.2e-311 L Transposase
AMGAALFI_01052 2.9e-154 EG EamA-like transporter family
AMGAALFI_01053 2.5e-118 L Integrase
AMGAALFI_01054 1.7e-159 rssA S Phospholipase, patatin family
AMGAALFI_01055 9.8e-266 L PFAM Integrase catalytic region
AMGAALFI_01056 4.6e-202 xerS L Belongs to the 'phage' integrase family
AMGAALFI_01058 6.6e-72 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
AMGAALFI_01059 4.2e-77 marR K Transcriptional regulator, MarR family
AMGAALFI_01060 3.8e-179 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AMGAALFI_01061 6.5e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
AMGAALFI_01062 3.3e-164 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
AMGAALFI_01063 1.3e-131 IQ reductase
AMGAALFI_01064 5.6e-228 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
AMGAALFI_01065 2.1e-76 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
AMGAALFI_01066 1e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
AMGAALFI_01067 3.2e-261 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
AMGAALFI_01068 6.5e-143 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AMGAALFI_01069 1.6e-140 accA 2.1.3.15, 6.4.1.2 I alpha subunit
AMGAALFI_01070 4.9e-134 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
AMGAALFI_01079 3.6e-55
AMGAALFI_01080 2.3e-116 frnE Q DSBA-like thioredoxin domain
AMGAALFI_01081 5e-167 I alpha/beta hydrolase fold
AMGAALFI_01082 3.3e-85 L PFAM transposase IS200-family protein
AMGAALFI_01085 5e-22 S Phage derived protein Gp49-like (DUF891)
AMGAALFI_01086 1.7e-47 L Belongs to the 'phage' integrase family
AMGAALFI_01088 2.3e-36 S Lipopolysaccharide assembly protein A domain
AMGAALFI_01089 3.7e-159 3.1.3.102, 3.1.3.104 S hydrolase
AMGAALFI_01090 1.2e-90 ntd 2.4.2.6 F Nucleoside
AMGAALFI_01091 7.5e-21
AMGAALFI_01092 1.7e-167 S Alpha/beta hydrolase of unknown function (DUF915)
AMGAALFI_01093 4.3e-115 yviA S Protein of unknown function (DUF421)
AMGAALFI_01094 1.9e-29 S Protein of unknown function (DUF3290)
AMGAALFI_01095 2e-28 S Protein of unknown function (DUF3290)
AMGAALFI_01096 3.5e-42 ybaN S Protein of unknown function (DUF454)
AMGAALFI_01097 3.5e-263 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
AMGAALFI_01098 0.0 I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AMGAALFI_01099 7.7e-160 endA V DNA/RNA non-specific endonuclease
AMGAALFI_01100 3.5e-255 yifK E Amino acid permease
AMGAALFI_01102 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AMGAALFI_01103 2e-233 N Uncharacterized conserved protein (DUF2075)
AMGAALFI_01104 6.1e-123 S SNARE associated Golgi protein
AMGAALFI_01105 0.0 uvrA3 L excinuclease ABC, A subunit
AMGAALFI_01106 9.1e-56 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AMGAALFI_01107 2.3e-60 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AMGAALFI_01108 8.3e-69 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AMGAALFI_01109 7.6e-149 S DUF218 domain
AMGAALFI_01110 0.0 ubiB S ABC1 family
AMGAALFI_01111 2.2e-246 yhdP S Transporter associated domain
AMGAALFI_01112 5e-75 copY K Copper transport repressor CopY TcrY
AMGAALFI_01113 2.3e-246 EGP Major facilitator Superfamily
AMGAALFI_01114 4.5e-74 yeaL S UPF0756 membrane protein
AMGAALFI_01115 1.7e-62 yphH S Cupin domain
AMGAALFI_01116 2.8e-87 C Flavodoxin
AMGAALFI_01117 2.9e-162 K LysR substrate binding domain protein
AMGAALFI_01118 6.2e-176 1.1.1.346 C Aldo keto reductase
AMGAALFI_01119 2.1e-39 gcvR T Belongs to the UPF0237 family
AMGAALFI_01120 1.6e-244 XK27_08635 S UPF0210 protein
AMGAALFI_01121 3.5e-263 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
AMGAALFI_01122 4.8e-96 K Acetyltransferase (GNAT) domain
AMGAALFI_01123 1.2e-160 S Alpha beta hydrolase
AMGAALFI_01124 3.1e-161 gspA M family 8
AMGAALFI_01125 6e-120 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
AMGAALFI_01126 9.4e-94
AMGAALFI_01127 1.7e-162 degV S EDD domain protein, DegV family
AMGAALFI_01128 0.0 FbpA K Fibronectin-binding protein
AMGAALFI_01129 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
AMGAALFI_01130 1.5e-208 carA 6.3.5.5 F Belongs to the CarA family
AMGAALFI_01131 4.8e-176 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
AMGAALFI_01132 1.3e-73 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AMGAALFI_01133 1.5e-65 esbA S Family of unknown function (DUF5322)
AMGAALFI_01134 6.9e-71 rnhA 3.1.26.4 L Ribonuclease HI
AMGAALFI_01135 1.2e-232 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
AMGAALFI_01136 7.7e-85 F Belongs to the NrdI family
AMGAALFI_01137 1.7e-44 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
AMGAALFI_01138 1.6e-105 ypsA S Belongs to the UPF0398 family
AMGAALFI_01139 1.2e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
AMGAALFI_01140 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
AMGAALFI_01141 1.4e-162 EG EamA-like transporter family
AMGAALFI_01142 5.1e-125 dnaD L DnaD domain protein
AMGAALFI_01143 1.8e-87 ypmB S Protein conserved in bacteria
AMGAALFI_01144 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
AMGAALFI_01145 2.1e-174 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
AMGAALFI_01146 4.6e-177 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
AMGAALFI_01147 4.2e-214 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
AMGAALFI_01148 1.7e-193 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
AMGAALFI_01149 1.9e-89 S Protein of unknown function (DUF1440)
AMGAALFI_01150 0.0 rafA 3.2.1.22 G alpha-galactosidase
AMGAALFI_01151 6.3e-193 galR K Periplasmic binding protein-like domain
AMGAALFI_01152 1.4e-80 scrK 2.7.1.2, 2.7.1.4 GK ROK family
AMGAALFI_01153 2.5e-80 scrK 2.7.1.2, 2.7.1.4 GK ROK family
AMGAALFI_01154 6.4e-179 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
AMGAALFI_01155 2.6e-124 lrgB M LrgB-like family
AMGAALFI_01156 1.9e-66 lrgA S LrgA family
AMGAALFI_01157 1.1e-130 lytT K response regulator receiver
AMGAALFI_01158 0.0 lytS 2.7.13.3 T LytS YhcK-type transmembrane receptor domain protein
AMGAALFI_01159 3.4e-147 f42a O Band 7 protein
AMGAALFI_01160 2e-266 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
AMGAALFI_01161 2.9e-156 yitU 3.1.3.104 S hydrolase
AMGAALFI_01162 3.2e-39 S Cytochrome B5
AMGAALFI_01163 1.2e-117 nreC K PFAM regulatory protein LuxR
AMGAALFI_01164 1.5e-161 hipB K Helix-turn-helix
AMGAALFI_01165 2.8e-57 yitW S Iron-sulfur cluster assembly protein
AMGAALFI_01166 4.2e-272 sufB O assembly protein SufB
AMGAALFI_01167 6.5e-81 nifU C SUF system FeS assembly protein, NifU family
AMGAALFI_01168 1.6e-238 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AMGAALFI_01169 5.4e-242 sufD O FeS assembly protein SufD
AMGAALFI_01170 6.5e-145 sufC O FeS assembly ATPase SufC
AMGAALFI_01171 1.2e-31 feoA P FeoA domain
AMGAALFI_01172 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
AMGAALFI_01173 1.6e-274 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
AMGAALFI_01174 5.8e-157 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
AMGAALFI_01175 1.6e-64 ydiI Q Thioesterase superfamily
AMGAALFI_01176 2.4e-109 yvrI K sigma factor activity
AMGAALFI_01177 5e-202 G Transporter, major facilitator family protein
AMGAALFI_01178 0.0 S Bacterial membrane protein YfhO
AMGAALFI_01179 3.9e-104 T Ion transport 2 domain protein
AMGAALFI_01180 4.7e-79 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
AMGAALFI_01181 1.1e-228 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
AMGAALFI_01182 4.5e-106 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
AMGAALFI_01183 1.8e-203 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AMGAALFI_01184 5.1e-181 rihA 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
AMGAALFI_01186 0.0 L PLD-like domain
AMGAALFI_01187 4.3e-36 higA K addiction module antidote protein HigA
AMGAALFI_01188 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
AMGAALFI_01189 2.3e-180 3.1.21.3 V Type I restriction modification DNA specificity domain
AMGAALFI_01190 1.5e-180 xerC L Belongs to the 'phage' integrase family
AMGAALFI_01191 6.8e-113 hsdS 3.1.21.3 V Type I restriction modification DNA specificity domain
AMGAALFI_01192 9.5e-101 hsdS 2.1.1.72, 3.1.21.3 V Type I restriction modification DNA specificity domain
AMGAALFI_01193 2.1e-301 2.1.1.72 V type I restriction-modification system
AMGAALFI_01194 2.8e-58 yhaI S Protein of unknown function (DUF805)
AMGAALFI_01195 2.2e-44
AMGAALFI_01196 0.0 nylA 3.5.1.4 J Belongs to the amidase family
AMGAALFI_01197 2.4e-22
AMGAALFI_01198 1.7e-96 K Acetyltransferase (GNAT) domain
AMGAALFI_01199 5.3e-297 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
AMGAALFI_01200 1e-15 gntT EG Gluconate
AMGAALFI_01201 8.8e-178 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
AMGAALFI_01202 2.9e-81 S Bacteriophage holin family
AMGAALFI_01204 2e-76
AMGAALFI_01207 2.8e-210
AMGAALFI_01208 8.2e-32 S GDSL-like Lipase/Acylhydrolase
AMGAALFI_01211 3.8e-11 GT2,GT4 LM gp58-like protein
AMGAALFI_01212 0.0 S Peptidase family M23
AMGAALFI_01213 3.9e-175 S Phage tail protein
AMGAALFI_01214 0.0 D NLP P60 protein
AMGAALFI_01215 9.4e-95 S Phage tail assembly chaperone protein, TAC
AMGAALFI_01216 5.1e-124
AMGAALFI_01217 1.1e-71
AMGAALFI_01218 8.2e-86
AMGAALFI_01219 3e-53
AMGAALFI_01220 2.2e-63 S Phage gp6-like head-tail connector protein
AMGAALFI_01221 8.9e-206 gpG
AMGAALFI_01222 6.8e-108 S Domain of unknown function (DUF4355)
AMGAALFI_01224 4.3e-180 S Phage Mu protein F like protein
AMGAALFI_01225 0.0 S Phage portal protein, SPP1 Gp6-like
AMGAALFI_01226 1.3e-264 S Phage terminase, large subunit
AMGAALFI_01228 8e-140 K Belongs to the N(4) N(6)-methyltransferase family
AMGAALFI_01229 5.7e-71
AMGAALFI_01230 9.7e-126 1.8.4.10, 1.8.4.8, 2.7.7.4 EH sulfate reduction
AMGAALFI_01232 8.9e-77
AMGAALFI_01235 1.3e-07
AMGAALFI_01244 3.8e-59
AMGAALFI_01245 7e-153 L Psort location Cytoplasmic, score
AMGAALFI_01246 4.8e-153 pi112 3.6.4.12 L PDDEXK-like domain of unknown function (DUF3799)
AMGAALFI_01247 4.2e-178 recT L RecT family
AMGAALFI_01251 1.8e-17
AMGAALFI_01252 5e-142 K BRO family, N-terminal domain
AMGAALFI_01253 8e-31 K Helix-turn-helix XRE-family like proteins
AMGAALFI_01254 5.3e-72 K Cro/C1-type HTH DNA-binding domain
AMGAALFI_01255 1e-83 E IrrE N-terminal-like domain
AMGAALFI_01256 7.6e-30 M Host cell surface-exposed lipoprotein
AMGAALFI_01257 1.3e-51
AMGAALFI_01258 2.5e-211 L Belongs to the 'phage' integrase family
AMGAALFI_01259 3.6e-64 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
AMGAALFI_01260 6.8e-262 yfnA E amino acid
AMGAALFI_01261 9.9e-143 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
AMGAALFI_01262 3.1e-92 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AMGAALFI_01263 4.1e-40 ylqC S Belongs to the UPF0109 family
AMGAALFI_01264 2.2e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
AMGAALFI_01265 2.7e-250 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AMGAALFI_01266 1.3e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
AMGAALFI_01267 2.2e-181 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
AMGAALFI_01268 0.0 smc D Required for chromosome condensation and partitioning
AMGAALFI_01269 4.2e-132 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
AMGAALFI_01270 2.9e-38 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
AMGAALFI_01271 7.3e-189 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
AMGAALFI_01272 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AMGAALFI_01273 0.0 yloV S DAK2 domain fusion protein YloV
AMGAALFI_01274 4.7e-58 asp S Asp23 family, cell envelope-related function
AMGAALFI_01275 7e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
AMGAALFI_01276 7.4e-123 thiN 2.7.6.2 H thiamine pyrophosphokinase
AMGAALFI_01277 1.5e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
AMGAALFI_01278 2.6e-166 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
AMGAALFI_01279 0.0 KLT serine threonine protein kinase
AMGAALFI_01280 6.9e-133 stp 3.1.3.16 T phosphatase
AMGAALFI_01281 2e-255 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AMGAALFI_01282 6.5e-176 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AMGAALFI_01283 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AMGAALFI_01284 5.1e-218 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AMGAALFI_01285 7.7e-32 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
AMGAALFI_01286 4.2e-115 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
AMGAALFI_01287 1.7e-54
AMGAALFI_01288 2.3e-264 recN L May be involved in recombinational repair of damaged DNA
AMGAALFI_01289 1e-78 argR K Regulates arginine biosynthesis genes
AMGAALFI_01290 1.1e-150 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
AMGAALFI_01291 5.4e-161 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
AMGAALFI_01292 1.5e-43 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
AMGAALFI_01293 6.7e-203 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
AMGAALFI_01294 3.4e-155 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AMGAALFI_01295 3.6e-70 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AMGAALFI_01296 2.2e-70 yqhY S Asp23 family, cell envelope-related function
AMGAALFI_01297 4.5e-123 J 2'-5' RNA ligase superfamily
AMGAALFI_01298 1.7e-204 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
AMGAALFI_01299 8.6e-133 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AMGAALFI_01300 2.1e-45 rpmA J Belongs to the bacterial ribosomal protein bL27 family
AMGAALFI_01301 7.4e-55 ysxB J Cysteine protease Prp
AMGAALFI_01302 5.2e-50 rplU J This protein binds to 23S rRNA in the presence of protein L20
AMGAALFI_01303 2.6e-112 K Transcriptional regulator
AMGAALFI_01306 6.5e-90 dut S Protein conserved in bacteria
AMGAALFI_01307 1.8e-187
AMGAALFI_01308 2.7e-152
AMGAALFI_01309 1.3e-51 S Iron-sulfur cluster assembly protein
AMGAALFI_01310 5e-101 msrA 1.8.4.11, 1.8.4.12 C Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AMGAALFI_01311 1.3e-156 P Belongs to the nlpA lipoprotein family
AMGAALFI_01312 3.9e-12
AMGAALFI_01313 1.1e-225 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
AMGAALFI_01314 4e-297 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AMGAALFI_01315 6.2e-265 glnA 6.3.1.2 E glutamine synthetase
AMGAALFI_01316 1e-178 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AMGAALFI_01317 5.9e-22 S Protein of unknown function (DUF3042)
AMGAALFI_01318 9.1e-68 yqhL P Rhodanese-like protein
AMGAALFI_01319 1.5e-183 glk 2.7.1.2 G Glucokinase
AMGAALFI_01320 7.4e-36 yqgQ S Bacterial protein of unknown function (DUF910)
AMGAALFI_01321 2.2e-114 gluP 3.4.21.105 S Peptidase, S54 family
AMGAALFI_01322 1.4e-101 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AMGAALFI_01323 4.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
AMGAALFI_01324 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
AMGAALFI_01325 0.0 S membrane
AMGAALFI_01326 4e-71 yneR S Belongs to the HesB IscA family
AMGAALFI_01327 1.4e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
AMGAALFI_01328 3.3e-118 udk 2.7.1.48 F Cytidine monophosphokinase
AMGAALFI_01329 6.9e-113 rlpA M PFAM NLP P60 protein
AMGAALFI_01330 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
AMGAALFI_01331 2.3e-198 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AMGAALFI_01332 2.6e-58 yodB K Transcriptional regulator, HxlR family
AMGAALFI_01333 3.1e-92 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
AMGAALFI_01334 2.2e-145 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AMGAALFI_01335 8.2e-47 acyP 3.6.1.7 C Belongs to the acylphosphatase family
AMGAALFI_01336 1.5e-169 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
AMGAALFI_01337 9.3e-71 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
AMGAALFI_01338 7.8e-236 V MatE
AMGAALFI_01339 1.8e-268 yjeM E Amino Acid
AMGAALFI_01340 9.8e-280 arlS 2.7.13.3 T Histidine kinase
AMGAALFI_01341 1.5e-121 K response regulator
AMGAALFI_01342 1.1e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
AMGAALFI_01343 2.9e-99 yceD S Uncharacterized ACR, COG1399
AMGAALFI_01344 2.9e-215 ylbM S Belongs to the UPF0348 family
AMGAALFI_01345 1.4e-141 yqeM Q Methyltransferase
AMGAALFI_01346 1.3e-60 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
AMGAALFI_01347 9.2e-115 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
AMGAALFI_01348 7.9e-125 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AMGAALFI_01349 1.9e-47 yhbY J RNA-binding protein
AMGAALFI_01350 5.6e-219 yqeH S Ribosome biogenesis GTPase YqeH
AMGAALFI_01351 2.8e-96 yqeG S HAD phosphatase, family IIIA
AMGAALFI_01352 4.3e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AMGAALFI_01353 2.3e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
AMGAALFI_01354 6.3e-85 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AMGAALFI_01355 1e-173 dnaI L Primosomal protein DnaI
AMGAALFI_01356 3.2e-208 dnaB L replication initiation and membrane attachment
AMGAALFI_01357 1.1e-80 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AMGAALFI_01358 9.3e-104 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AMGAALFI_01359 8.8e-161 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
AMGAALFI_01360 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AMGAALFI_01361 1.8e-119 yoaK S Protein of unknown function (DUF1275)
AMGAALFI_01362 1.4e-119 ybhL S Belongs to the BI1 family
AMGAALFI_01363 1.2e-252 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
AMGAALFI_01364 2.9e-119 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
AMGAALFI_01365 1.7e-56 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
AMGAALFI_01366 7.5e-58 ytzB S Small secreted protein
AMGAALFI_01367 2.6e-169 glsA 3.5.1.2 E Belongs to the glutaminase family
AMGAALFI_01368 1.1e-186 iolS C Aldo keto reductase
AMGAALFI_01369 3.5e-293 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
AMGAALFI_01370 3.5e-263 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
AMGAALFI_01371 1.5e-284 A chlorophyll binding
AMGAALFI_01372 2.2e-182 S YSIRK type signal peptide
AMGAALFI_01373 2.8e-122 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
AMGAALFI_01374 1.7e-221 ecsB U ABC transporter
AMGAALFI_01375 1.2e-137 ecsA V ABC transporter, ATP-binding protein
AMGAALFI_01376 8.3e-78 hit FG histidine triad
AMGAALFI_01378 1.2e-129 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
AMGAALFI_01379 0.0 L AAA domain
AMGAALFI_01380 1.3e-229 yhaO L Ser Thr phosphatase family protein
AMGAALFI_01381 2.6e-40 yheA S Belongs to the UPF0342 family
AMGAALFI_01382 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
AMGAALFI_01383 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
AMGAALFI_01384 7.3e-152 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
AMGAALFI_01385 8.4e-168 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
AMGAALFI_01387 3.3e-40
AMGAALFI_01388 1e-43
AMGAALFI_01389 4.2e-217 folP 2.5.1.15 H dihydropteroate synthase
AMGAALFI_01390 2.6e-106 xtp 2.5.1.15, 3.6.1.66 F Ham1 family
AMGAALFI_01391 6.7e-237 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
AMGAALFI_01392 6.2e-105 folE 2.7.6.3, 3.5.4.16 F GTP cyclohydrolase 1
AMGAALFI_01393 1.2e-94 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
AMGAALFI_01394 1.1e-56 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AMGAALFI_01395 8.7e-74
AMGAALFI_01397 1.9e-43
AMGAALFI_01398 2.8e-120 S CAAX protease self-immunity
AMGAALFI_01399 2.1e-32
AMGAALFI_01400 8e-163 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AMGAALFI_01401 4.6e-188 rbsR K Periplasmic binding proteins and sugar binding domain of LacI family
AMGAALFI_01402 5.9e-114
AMGAALFI_01403 5e-116 dck 2.7.1.74 F deoxynucleoside kinase
AMGAALFI_01404 3.2e-189 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AMGAALFI_01405 1.9e-86 uspA T Belongs to the universal stress protein A family
AMGAALFI_01406 8.7e-278 pepV 3.5.1.18 E dipeptidase PepV
AMGAALFI_01407 1.2e-155 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AMGAALFI_01408 6.4e-304 ytgP S Polysaccharide biosynthesis protein
AMGAALFI_01409 4.5e-42
AMGAALFI_01410 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
AMGAALFI_01411 1.9e-217 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AMGAALFI_01412 2.5e-100 tag 3.2.2.20 L glycosylase
AMGAALFI_01413 1.5e-29
AMGAALFI_01414 4.2e-259 EGP Major facilitator Superfamily
AMGAALFI_01415 4.3e-85 perR P Belongs to the Fur family
AMGAALFI_01416 2.2e-233 cycA E Amino acid permease
AMGAALFI_01417 2.6e-103 V VanZ like family
AMGAALFI_01418 1e-23
AMGAALFI_01419 2.2e-85 S Short repeat of unknown function (DUF308)
AMGAALFI_01420 1.5e-79 S Psort location Cytoplasmic, score
AMGAALFI_01421 1.9e-286 dinB 2.7.7.7 L impB/mucB/samB family C-terminal domain
AMGAALFI_01422 2.4e-77 hsp O Belongs to the small heat shock protein (HSP20) family
AMGAALFI_01423 1e-156 yeaE S Aldo keto
AMGAALFI_01424 4e-237 preA 1.3.1.1 C 4Fe-4S dicluster domain
AMGAALFI_01425 7.3e-236 preT 1.3.1.1 E Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
AMGAALFI_01426 5.8e-151 xth 3.1.11.2 L exodeoxyribonuclease III
AMGAALFI_01427 1.9e-95 lytE M LysM domain protein
AMGAALFI_01428 0.0 oppD EP Psort location Cytoplasmic, score
AMGAALFI_01429 6.8e-43 lytE M LysM domain protein
AMGAALFI_01430 1.1e-166 sufD O Uncharacterized protein family (UPF0051)
AMGAALFI_01431 9e-112 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AMGAALFI_01432 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
AMGAALFI_01433 4.2e-240 lmrB EGP Major facilitator Superfamily
AMGAALFI_01434 1.1e-101 2.3.1.128 K Acetyltransferase (GNAT) domain
AMGAALFI_01446 1.5e-39 ykuJ S Protein of unknown function (DUF1797)
AMGAALFI_01447 1.3e-179 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AMGAALFI_01448 1.6e-199 cpoA GT4 M Glycosyltransferase, group 1 family protein
AMGAALFI_01449 1.2e-230 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
AMGAALFI_01450 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AMGAALFI_01451 2.7e-39 ptsH G phosphocarrier protein HPR
AMGAALFI_01452 2.2e-27
AMGAALFI_01453 0.0 clpE O Belongs to the ClpA ClpB family
AMGAALFI_01454 1.7e-100 S Pfam:DUF3816
AMGAALFI_01455 8e-142 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G MucBP domain
AMGAALFI_01456 2.6e-118
AMGAALFI_01457 1e-159 V ABC transporter, ATP-binding protein
AMGAALFI_01458 1.2e-64 gntR1 K Transcriptional regulator, GntR family
AMGAALFI_01459 2.1e-171 3.2.1.23, 3.2.1.89 G arabinogalactan endo-1,4-beta-galactosidase activity
AMGAALFI_01460 3.5e-282 ganB 3.2.1.89 G arabinogalactan
AMGAALFI_01461 6.7e-40 S dextransucrase activity
AMGAALFI_01462 3.6e-45 L PFAM Integrase catalytic region
AMGAALFI_01463 2.5e-163 L hmm pf00665
AMGAALFI_01464 5.1e-57 L Helix-turn-helix domain
AMGAALFI_01465 2e-32 L Helix-turn-helix domain
AMGAALFI_01466 4.6e-247 L Transposase
AMGAALFI_01467 2.1e-29 L Transposase
AMGAALFI_01468 1.7e-57 L PFAM Integrase catalytic region
AMGAALFI_01469 1.1e-96 L Helix-turn-helix domain
AMGAALFI_01470 1.1e-115 L PFAM Integrase, catalytic core
AMGAALFI_01471 7.8e-38 L Helix-turn-helix domain
AMGAALFI_01472 0.0 gtfC 2.4.1.5 GH13 G Glycosyl hydrolase family 70
AMGAALFI_01473 3.1e-103 M NlpC P60 family protein
AMGAALFI_01474 1.7e-262 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
AMGAALFI_01475 3.3e-85 L PFAM transposase IS200-family protein
AMGAALFI_01476 5.7e-310 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
AMGAALFI_01477 4e-225 brpA K Cell envelope-like function transcriptional attenuator common domain protein
AMGAALFI_01478 2.1e-288 S Psort location CytoplasmicMembrane, score
AMGAALFI_01479 1.4e-164 yueF S AI-2E family transporter
AMGAALFI_01480 3.2e-119 S dextransucrase activity
AMGAALFI_01481 1.1e-225 S Uncharacterised protein family (UPF0236)
AMGAALFI_01482 2e-120 L PFAM Integrase catalytic region
AMGAALFI_01483 5.8e-106 L Helix-turn-helix domain
AMGAALFI_01484 2.1e-79 L hmm pf00665
AMGAALFI_01485 1.2e-132 O Bacterial dnaA protein
AMGAALFI_01486 1.6e-238 L Integrase core domain
AMGAALFI_01487 5.4e-178 M Glycosyltransferase like family 2
AMGAALFI_01488 3e-27
AMGAALFI_01489 5.9e-135 M repeat protein
AMGAALFI_01490 1e-157 3.2.1.96, 3.5.1.28 GH73 M repeat protein
AMGAALFI_01491 3.3e-85 L PFAM transposase IS200-family protein
AMGAALFI_01492 1.6e-141 acmD M repeat protein
AMGAALFI_01493 1.7e-196 S enterobacterial common antigen metabolic process
AMGAALFI_01494 9.6e-194 M transferase activity, transferring glycosyl groups
AMGAALFI_01495 9.3e-200 waaB GT4 M Glycosyl transferases group 1
AMGAALFI_01496 4.9e-260 rfbX S Membrane protein involved in the export of O-antigen and teichoic acid
AMGAALFI_01497 1.4e-105 M biosynthesis protein
AMGAALFI_01498 4.3e-217 cps3F
AMGAALFI_01499 6e-221 glf 5.4.99.9 M UDP-galactopyranose mutase
AMGAALFI_01500 1.7e-122 rfbP 2.7.8.6 M Bacterial sugar transferase
AMGAALFI_01501 9.8e-177 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
AMGAALFI_01502 1.1e-149 cps1D M Domain of unknown function (DUF4422)
AMGAALFI_01503 9.3e-144 recX 2.4.1.337 GT4 S Regulatory protein RecX
AMGAALFI_01504 2.2e-31
AMGAALFI_01505 5e-34 S Protein of unknown function (DUF2922)
AMGAALFI_01506 8.5e-154 yihY S Belongs to the UPF0761 family
AMGAALFI_01507 1.1e-281 yjeM E Amino Acid
AMGAALFI_01508 1.7e-257 E Arginine ornithine antiporter
AMGAALFI_01509 8.4e-223 arcT 2.6.1.1 E Aminotransferase
AMGAALFI_01510 1.7e-167 map 3.4.11.18 E Methionine Aminopeptidase
AMGAALFI_01511 2.1e-79 fld C Flavodoxin
AMGAALFI_01512 1.5e-74 gtcA S Teichoic acid glycosylation protein
AMGAALFI_01513 3.6e-54
AMGAALFI_01514 3.3e-211 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
AMGAALFI_01516 3.6e-233 yfmL 3.6.4.13 L DEAD DEAH box helicase
AMGAALFI_01517 1.2e-191 mocA S Oxidoreductase
AMGAALFI_01518 7e-62 S Domain of unknown function (DUF4828)
AMGAALFI_01519 1.3e-110 yvdD 3.2.2.10 S Belongs to the LOG family
AMGAALFI_01520 2.7e-166 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
AMGAALFI_01521 1.3e-298 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
AMGAALFI_01522 6.3e-201 S Protein of unknown function (DUF3114)
AMGAALFI_01523 5.8e-82 yjcF 3.5.4.33, 4.4.1.8 K protein acetylation
AMGAALFI_01524 7.6e-121 ybhL S Belongs to the BI1 family
AMGAALFI_01525 3.7e-22
AMGAALFI_01526 2.5e-97 K Acetyltransferase (GNAT) family
AMGAALFI_01527 2.9e-78 K LytTr DNA-binding domain
AMGAALFI_01528 5.6e-69 S Protein of unknown function (DUF3021)
AMGAALFI_01529 1.1e-156 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
AMGAALFI_01530 4.2e-77 XK27_00915 C Luciferase-like monooxygenase
AMGAALFI_01531 9.5e-132 L transposase, IS605 OrfB family
AMGAALFI_01532 2.2e-84 ogt 2.1.1.63 L Methyltransferase
AMGAALFI_01533 1.4e-124 pnb C nitroreductase
AMGAALFI_01534 2.5e-92
AMGAALFI_01535 1e-84 yvbK 3.1.3.25 K GNAT family
AMGAALFI_01536 3e-256 gor 1.8.1.7 C pyridine nucleotide-disulfide oxidoreductase
AMGAALFI_01537 2.3e-207 amtB P ammonium transporter
AMGAALFI_01538 4.4e-49 3.6.4.12 S PD-(D/E)XK nuclease family transposase
AMGAALFI_01539 7.9e-70 S PFAM Archaeal ATPase
AMGAALFI_01540 3.1e-104 S PFAM Archaeal ATPase
AMGAALFI_01541 0.0 XK27_08510 L Type III restriction protein res subunit
AMGAALFI_01542 5.7e-52
AMGAALFI_01543 1.1e-158 cylA V ABC transporter
AMGAALFI_01544 1.7e-146 cylB V ABC-2 type transporter
AMGAALFI_01545 1.4e-75 K LytTr DNA-binding domain
AMGAALFI_01546 6.3e-61 S Protein of unknown function (DUF3021)
AMGAALFI_01548 8.6e-184 L Plasmid pRiA4b ORF-3-like protein
AMGAALFI_01550 7.6e-112 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
AMGAALFI_01551 4.8e-99 dps P Belongs to the Dps family
AMGAALFI_01552 2.5e-36 copZ P PFAM Heavy metal transport detoxification protein
AMGAALFI_01553 1.5e-90 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
AMGAALFI_01554 7.2e-183 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
AMGAALFI_01555 1.9e-38 3.6.1.13, 3.6.1.55 F NUDIX domain
AMGAALFI_01556 1.3e-262 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
AMGAALFI_01557 6.3e-90 entB 3.5.1.19 Q Isochorismatase family
AMGAALFI_01558 0.0 hsdR 3.1.21.3 V EcoEI R protein C-terminal
AMGAALFI_01559 1.2e-180 3.1.21.3 V Type I restriction modification DNA specificity domain
AMGAALFI_01560 2.4e-178 L Belongs to the 'phage' integrase family
AMGAALFI_01561 5.1e-196 3.1.21.3 V Type I restriction modification DNA specificity domain
AMGAALFI_01562 3.1e-300 hsdM 2.1.1.72 V type I restriction-modification system
AMGAALFI_01563 5.4e-236
AMGAALFI_01564 6.1e-268 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AMGAALFI_01566 3.5e-188 yegS 2.7.1.107 G Lipid kinase
AMGAALFI_01567 2.4e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AMGAALFI_01568 4.1e-278 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
AMGAALFI_01569 2.4e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AMGAALFI_01570 3.3e-203 camS S sex pheromone
AMGAALFI_01571 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AMGAALFI_01572 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
AMGAALFI_01573 9.4e-214 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
AMGAALFI_01574 3.5e-100 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
AMGAALFI_01575 3.6e-114 acmC 3.2.1.96 NU mannosyl-glycoprotein
AMGAALFI_01576 5.5e-141 IQ reductase
AMGAALFI_01577 5.6e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
AMGAALFI_01578 9.1e-80 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AMGAALFI_01579 1.2e-143 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
AMGAALFI_01580 1.2e-141 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AMGAALFI_01581 1.5e-155 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AMGAALFI_01582 1.9e-147 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AMGAALFI_01583 1.1e-62 rplQ J Ribosomal protein L17
AMGAALFI_01584 2.8e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AMGAALFI_01585 2.3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AMGAALFI_01586 4.7e-58 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AMGAALFI_01587 1.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
AMGAALFI_01588 1.2e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AMGAALFI_01589 8.1e-125 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
AMGAALFI_01590 8.8e-240 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
AMGAALFI_01591 6.8e-64 rplO J Binds to the 23S rRNA
AMGAALFI_01592 2.9e-24 rpmD J Ribosomal protein L30
AMGAALFI_01593 2.2e-85 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AMGAALFI_01594 6.6e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AMGAALFI_01595 3.2e-95 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AMGAALFI_01596 1.3e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AMGAALFI_01597 1.4e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AMGAALFI_01598 2.6e-49 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AMGAALFI_01599 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AMGAALFI_01600 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AMGAALFI_01601 8.4e-28 rpmC J Belongs to the universal ribosomal protein uL29 family
AMGAALFI_01602 3.5e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AMGAALFI_01603 6.1e-112 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AMGAALFI_01604 2.8e-52 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AMGAALFI_01605 1.4e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AMGAALFI_01606 4.2e-150 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AMGAALFI_01607 5.7e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
AMGAALFI_01608 5.5e-107 rplD J Forms part of the polypeptide exit tunnel
AMGAALFI_01609 1.5e-118 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AMGAALFI_01610 3.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
AMGAALFI_01611 5.4e-200 L Transposase
AMGAALFI_01612 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AMGAALFI_01613 2.4e-83 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
AMGAALFI_01614 5e-72 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AMGAALFI_01615 2.7e-120 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
AMGAALFI_01616 1.5e-201 ykiI
AMGAALFI_01617 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AMGAALFI_01618 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AMGAALFI_01619 1e-110 K Bacterial regulatory proteins, tetR family
AMGAALFI_01620 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
AMGAALFI_01621 3.4e-77 ctsR K Belongs to the CtsR family
AMGAALFI_01622 1.6e-196 adhP 1.1.1.1 C alcohol dehydrogenase
AMGAALFI_01623 1e-148 S Hydrolases of the alpha beta superfamily
AMGAALFI_01629 4.3e-115 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
AMGAALFI_01630 3.3e-85 L PFAM transposase IS200-family protein
AMGAALFI_01631 1.3e-276 lysP E amino acid
AMGAALFI_01632 3.5e-10 2.3.1.128 J Acetyltransferase (GNAT) domain
AMGAALFI_01633 2.7e-120 lssY 3.6.1.27 I phosphatase
AMGAALFI_01634 7.2e-83 S Threonine/Serine exporter, ThrE
AMGAALFI_01635 2.1e-132 thrE S Putative threonine/serine exporter
AMGAALFI_01636 3.5e-31 cspC K Cold shock protein
AMGAALFI_01637 4.8e-125 sirR K iron dependent repressor
AMGAALFI_01638 4.1e-167 czcD P cation diffusion facilitator family transporter
AMGAALFI_01639 7.7e-118 S membrane
AMGAALFI_01640 1.3e-109 S VIT family
AMGAALFI_01641 5.5e-83 usp1 T Belongs to the universal stress protein A family
AMGAALFI_01642 1.4e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
AMGAALFI_01643 1.5e-152 glnH ET ABC transporter
AMGAALFI_01644 2.4e-110 gluC P ABC transporter permease
AMGAALFI_01645 3.6e-109 glnP P ABC transporter permease
AMGAALFI_01646 8.3e-221 S CAAX protease self-immunity
AMGAALFI_01647 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AMGAALFI_01648 2.9e-57
AMGAALFI_01649 2.6e-74 merR K MerR HTH family regulatory protein
AMGAALFI_01650 7.2e-270 lmrB EGP Major facilitator Superfamily
AMGAALFI_01651 5.8e-124 S Domain of unknown function (DUF4811)
AMGAALFI_01652 4.3e-166 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
AMGAALFI_01654 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AMGAALFI_01655 1.5e-94 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
AMGAALFI_01656 5.3e-189 I Alpha beta
AMGAALFI_01657 1.9e-281 emrY EGP Major facilitator Superfamily
AMGAALFI_01658 4.5e-120 ung2 3.2.2.27 L Uracil-DNA glycosylase
AMGAALFI_01659 9.4e-253 yjjP S Putative threonine/serine exporter
AMGAALFI_01660 8e-160 mleR K LysR family
AMGAALFI_01661 1.2e-253 yflS P Sodium:sulfate symporter transmembrane region
AMGAALFI_01662 5.6e-269 frdC 1.3.5.4 C FAD binding domain
AMGAALFI_01663 2.1e-260 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
AMGAALFI_01664 2e-310 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
AMGAALFI_01665 2.5e-161 mleR K LysR family
AMGAALFI_01666 7.8e-111 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AMGAALFI_01667 2.7e-207 adhA 1.1.1.1 C Zinc-binding alcohol dehydrogenase family protein
AMGAALFI_01668 2.3e-300 L PFAM plasmid pRiA4b ORF-3 family protein
AMGAALFI_01669 2e-266 S Uncharacterized protein conserved in bacteria (DUF2252)
AMGAALFI_01670 2e-22
AMGAALFI_01671 3.1e-203 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
AMGAALFI_01672 3e-75
AMGAALFI_01673 1.4e-231 dacA 3.4.16.4 M Belongs to the peptidase S11 family
AMGAALFI_01674 1.8e-131 ponA V Beta-lactamase enzyme family
AMGAALFI_01675 1.7e-284 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
AMGAALFI_01676 4.4e-217 uhpT EGP Major facilitator Superfamily
AMGAALFI_01677 6.4e-262 ytjP 3.5.1.18 E Dipeptidase
AMGAALFI_01678 1.5e-275 arcD S C4-dicarboxylate anaerobic carrier
AMGAALFI_01679 3e-181 yfeX P Peroxidase
AMGAALFI_01680 6.1e-102 lsa S ABC transporter
AMGAALFI_01681 3.2e-164 lsa S ABC transporter
AMGAALFI_01682 4.5e-137 I alpha/beta hydrolase fold
AMGAALFI_01683 1.1e-122 MA20_14895 S Conserved hypothetical protein 698
AMGAALFI_01684 7.6e-97 S NADPH-dependent FMN reductase
AMGAALFI_01685 2.7e-171 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
AMGAALFI_01686 3e-181 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
AMGAALFI_01687 1.6e-233 mntH P H( )-stimulated, divalent metal cation uptake system
AMGAALFI_01688 2e-83 Q Methyltransferase
AMGAALFI_01689 1.4e-116 ktrA P domain protein
AMGAALFI_01690 8.1e-241 ktrB P Potassium uptake protein
AMGAALFI_01691 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
AMGAALFI_01692 3.5e-140 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
AMGAALFI_01693 6.9e-225 G Glycosyl hydrolases family 8
AMGAALFI_01694 4.8e-246 ydaM M Glycosyl transferase
AMGAALFI_01695 5.2e-148
AMGAALFI_01696 6.6e-125 phoU P Plays a role in the regulation of phosphate uptake
AMGAALFI_01697 1.1e-136 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
AMGAALFI_01698 2.6e-155 pstA P Phosphate transport system permease protein PstA
AMGAALFI_01699 1.1e-153 pstC P probably responsible for the translocation of the substrate across the membrane
AMGAALFI_01700 4.6e-160 pstS P Phosphate
AMGAALFI_01701 1.6e-134 K Transcriptional regulatory protein, C-terminal domain protein
AMGAALFI_01702 1.4e-84 L Transposase
AMGAALFI_01703 3.1e-36 L Transposase
AMGAALFI_01705 6.2e-193
AMGAALFI_01706 5.2e-98 2.3.1.128 K acetyltransferase
AMGAALFI_01707 7.5e-114 manA 5.3.1.8 G mannose-6-phosphate isomerase
AMGAALFI_01708 2.7e-163 K LysR substrate binding domain
AMGAALFI_01709 5.2e-209 1.1.1.90 C Zn-dependent alcohol dehydrogenases, class III
AMGAALFI_01710 1.2e-54 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AMGAALFI_01711 1.6e-183
AMGAALFI_01712 6.4e-99 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AMGAALFI_01713 2e-184 S Phosphotransferase system, EIIC
AMGAALFI_01714 5.6e-39 L PFAM Integrase catalytic region
AMGAALFI_01715 9e-77 L PFAM Integrase catalytic region
AMGAALFI_01717 7.7e-160 metQ_4 P Belongs to the nlpA lipoprotein family
AMGAALFI_01718 1.5e-88 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
AMGAALFI_01719 6.9e-127 O Zinc-dependent metalloprotease
AMGAALFI_01720 1.9e-115 S Membrane
AMGAALFI_01721 1.9e-200 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
AMGAALFI_01722 5.7e-174 tnp2 L PFAM Transposase, IS204 IS1001 IS1096 IS1165
AMGAALFI_01723 1.6e-271 L PFAM Integrase catalytic region
AMGAALFI_01724 3.5e-238 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AMGAALFI_01725 2.5e-39 S Cytochrome B5
AMGAALFI_01726 2e-27
AMGAALFI_01727 3.4e-82 S Domain of unknown function (DUF4767)
AMGAALFI_01728 3.3e-13
AMGAALFI_01729 1.4e-212 cytX U Belongs to the purine-cytosine permease (2.A.39) family
AMGAALFI_01730 1.9e-97 wecD3 K PFAM GCN5-related N-acetyltransferase
AMGAALFI_01731 7.3e-80
AMGAALFI_01732 4.2e-123 M Lysin motif
AMGAALFI_01733 7.1e-201 EGP Major facilitator Superfamily
AMGAALFI_01734 1.2e-85 ywlG S Belongs to the UPF0340 family
AMGAALFI_01735 3.2e-161 spoU 2.1.1.185 J Methyltransferase
AMGAALFI_01736 1.3e-224 oxlT P Major Facilitator Superfamily
AMGAALFI_01737 3.8e-237 L Belongs to the 'phage' integrase family
AMGAALFI_01738 1.1e-33 S Domain of unknown function (DUF3173)
AMGAALFI_01740 0.0
AMGAALFI_01741 1.4e-172
AMGAALFI_01742 2.1e-85 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
AMGAALFI_01743 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
AMGAALFI_01744 1.6e-260 G Major Facilitator Superfamily
AMGAALFI_01745 4.2e-49 V DNA modification
AMGAALFI_01746 1.1e-302 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
AMGAALFI_01748 1.7e-226 S cog cog1373
AMGAALFI_01749 3.3e-177 coaA 2.7.1.33 F Pantothenic acid kinase
AMGAALFI_01750 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
AMGAALFI_01751 7e-161 EG EamA-like transporter family
AMGAALFI_01752 5e-27 Q pyridine nucleotide-disulphide oxidoreductase
AMGAALFI_01753 1.5e-230 L transposase, IS605 OrfB family
AMGAALFI_01754 9.6e-61 L PFAM transposase IS200-family protein
AMGAALFI_01755 0.0 helD 3.6.4.12 L DNA helicase
AMGAALFI_01756 3.6e-117 dedA S SNARE associated Golgi protein
AMGAALFI_01757 5e-127 3.1.3.73 G phosphoglycerate mutase
AMGAALFI_01758 1.3e-235 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AMGAALFI_01759 6.6e-35 S Transglycosylase associated protein
AMGAALFI_01761 1.5e-183 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMGAALFI_01762 9.5e-239 V domain protein
AMGAALFI_01763 1.6e-94 K Transcriptional regulator (TetR family)
AMGAALFI_01764 3.4e-39 pspC KT positive regulation of macromolecule biosynthetic process
AMGAALFI_01765 2e-152
AMGAALFI_01766 3.1e-17 3.2.1.14 GH18
AMGAALFI_01767 1.5e-82 zur P Belongs to the Fur family
AMGAALFI_01768 5.2e-104 gmk2 2.7.4.8 F Guanylate kinase
AMGAALFI_01769 6.9e-74 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
AMGAALFI_01770 1.1e-256 yfnA E Amino Acid
AMGAALFI_01771 3.9e-232 EGP Sugar (and other) transporter
AMGAALFI_01772 1e-232
AMGAALFI_01773 2.3e-209 potD P ABC transporter
AMGAALFI_01774 4.9e-140 potC P ABC transporter permease
AMGAALFI_01775 4.5e-146 potB P ABC transporter permease
AMGAALFI_01776 2e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
AMGAALFI_01777 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
AMGAALFI_01778 2.3e-178 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
AMGAALFI_01779 0.0 pacL 3.6.3.8 P P-type ATPase
AMGAALFI_01780 2.6e-85 dps P Belongs to the Dps family
AMGAALFI_01781 3e-254 yagE E amino acid
AMGAALFI_01782 2.5e-118 gph 3.1.3.18 S HAD hydrolase, family IA, variant
AMGAALFI_01783 5.7e-30 3.6.4.12 S PD-(D/E)XK nuclease family transposase
AMGAALFI_01784 2e-25 L Helix-turn-helix domain
AMGAALFI_01785 5.1e-87 L Helix-turn-helix domain
AMGAALFI_01786 1e-127 L hmm pf00665
AMGAALFI_01787 4.7e-185 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
AMGAALFI_01788 2.1e-182 iunH2 3.2.2.1 F nucleoside hydrolase
AMGAALFI_01789 2.5e-138 IQ KR domain
AMGAALFI_01790 6.6e-134 S membrane transporter protein
AMGAALFI_01791 1.9e-98 S ABC-type cobalt transport system, permease component
AMGAALFI_01792 1.6e-260 cbiO1 S ABC transporter, ATP-binding protein
AMGAALFI_01793 2.6e-115 P Cobalt transport protein
AMGAALFI_01794 1.6e-52 yvlA
AMGAALFI_01795 0.0 yjcE P Sodium proton antiporter
AMGAALFI_01796 2.2e-52 ypaA S Protein of unknown function (DUF1304)
AMGAALFI_01797 5.9e-168 D Alpha beta
AMGAALFI_01798 1e-72 K Transcriptional regulator
AMGAALFI_01799 2.6e-163
AMGAALFI_01800 8.8e-184 1.6.5.5 C Zinc-binding dehydrogenase
AMGAALFI_01801 3.5e-258 G PTS system Galactitol-specific IIC component
AMGAALFI_01802 8.2e-213 EGP Major facilitator Superfamily
AMGAALFI_01803 1.5e-137 V ABC transporter
AMGAALFI_01804 4.5e-121
AMGAALFI_01805 5.2e-14
AMGAALFI_01806 1.9e-63
AMGAALFI_01807 3.9e-195 lplA 6.3.1.20 H Lipoate-protein ligase
AMGAALFI_01808 5.1e-81 uspA T universal stress protein
AMGAALFI_01809 0.0 tetP J elongation factor G
AMGAALFI_01810 2.1e-168 GK ROK family
AMGAALFI_01811 7.2e-245 brnQ U Component of the transport system for branched-chain amino acids
AMGAALFI_01812 1.3e-81 tlpA2 L Transposase IS200 like
AMGAALFI_01813 4.9e-240 L transposase, IS605 OrfB family
AMGAALFI_01814 7e-141 aroD S Serine hydrolase (FSH1)
AMGAALFI_01815 7.2e-245 yagE E amino acid
AMGAALFI_01816 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
AMGAALFI_01817 4.3e-135 gntR K UbiC transcription regulator-associated domain protein
AMGAALFI_01818 4.2e-89 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AMGAALFI_01819 1.2e-285 pipD E Dipeptidase
AMGAALFI_01820 0.0 yfiC V ABC transporter
AMGAALFI_01821 4.8e-310 lmrA V ABC transporter, ATP-binding protein
AMGAALFI_01822 2.9e-190 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AMGAALFI_01823 1.2e-81 S ECF transporter, substrate-specific component
AMGAALFI_01824 2.5e-62 S Domain of unknown function (DUF4430)
AMGAALFI_01825 5.9e-194 cobT 2.4.2.21, 6.3.5.11, 6.3.5.9 F Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB)
AMGAALFI_01826 7.3e-132 hemD 2.1.1.107, 4.2.1.75 H Uroporphyrinogen-III synthase
AMGAALFI_01827 5.4e-112 gpm 3.1.3.73, 5.4.2.12 G Belongs to the phosphoglycerate mutase family
AMGAALFI_01828 4.8e-137 cobS 2.7.8.26 H Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
AMGAALFI_01829 1.6e-103 cobU 2.7.1.156, 2.7.7.62, 6.3.5.10 H Cobinamide kinase / cobinamide phosphate guanyltransferase
AMGAALFI_01830 3.4e-252 hemL 5.4.3.8 H Aminotransferase class-III
AMGAALFI_01831 2.4e-181 hemB 4.2.1.24 H Delta-aminolevulinic acid dehydratase
AMGAALFI_01832 2.3e-170 hemC 2.1.1.107, 2.5.1.61, 4.2.1.75 H Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps
AMGAALFI_01833 1.4e-237 hemA 1.2.1.70 H Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
AMGAALFI_01834 3.2e-80 cysG 1.3.1.76, 4.99.1.4 H Putative NAD(P)-binding
AMGAALFI_01835 3.3e-283 cobQ 6.3.5.10 H Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
AMGAALFI_01836 2e-149 cbiO 2.1.1.195 P part of an ABC transporter complex. Responsible for energy coupling to the transport system
AMGAALFI_01837 4.4e-118 cbiQ P Cobalt transport protein
AMGAALFI_01838 8.7e-53 cbiN P Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import
AMGAALFI_01839 2.4e-133 cbiM P Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import
AMGAALFI_01840 6e-126 cobI 2.1.1.130, 2.1.1.151, 4.99.1.3 H Tetrapyrrole (Corrin/Porphyrin) Methylases
AMGAALFI_01841 2.3e-147 cbiK 4.99.1.3 H Cobalt chelatase (CbiK)
AMGAALFI_01842 3e-262 cobA 2.1.1.107, 4.2.1.75 H Tetrapyrrole (Corrin/Porphyrin) Methylases
AMGAALFI_01843 2.5e-138 cobK 1.3.1.106, 1.3.1.54, 2.1.1.195 H Precorrin-6x reductase CbiJ/CobK
AMGAALFI_01844 5.7e-132 cobJ 2.1.1.131, 2.1.1.133, 2.1.1.271, 3.7.1.12, 6.3.5.10 H Tetrapyrrole (Corrin/Porphyrin) Methylases
AMGAALFI_01845 8.2e-196 cbiG 2.1.1.131, 2.1.1.133, 2.1.1.271, 3.7.1.12 H Cobalamin synthesis G C-terminus
AMGAALFI_01846 4.8e-137 cobM 1.3.1.76, 2.1.1.131, 2.1.1.133, 2.1.1.271, 3.7.1.12, 4.99.1.4 H Tetrapyrrole (Corrin/Porphyrin) Methylases
AMGAALFI_01847 4.9e-99 cbiT 2.1.1.132, 2.1.1.196 H Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
AMGAALFI_01848 1e-110 cbiE 2.1.1.132, 2.1.1.289 H Tetrapyrrole (Corrin/Porphyrin) Methylases
AMGAALFI_01849 1.6e-208 cbiD 2.1.1.195 H Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A
AMGAALFI_01850 9.2e-124 cbiC 5.4.99.60, 5.4.99.61 H Precorrin-8X methylmutase
AMGAALFI_01851 5.7e-180 cobD 6.3.1.10 H Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
AMGAALFI_01852 4.1e-264 cbiA 6.3.5.11, 6.3.5.9 F Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source
AMGAALFI_01853 1.5e-208 cobD 4.1.1.81 E Aminotransferase class I and II
AMGAALFI_01854 4.7e-190 L PFAM Integrase catalytic region
AMGAALFI_01855 1.7e-102 cobO 2.5.1.17 S Cobalamin adenosyltransferase
AMGAALFI_01856 7.1e-158 XK27_04590 S NADPH-dependent FMN reductase
AMGAALFI_01857 1e-78 fld C Flavodoxin
AMGAALFI_01858 3e-72 eutP E Ethanolamine utilisation - propanediol utilisation
AMGAALFI_01859 3.1e-93 P Cadmium resistance transporter
AMGAALFI_01860 3.1e-121 pgm1 3.1.3.73 G phosphoglycerate mutase
AMGAALFI_01861 1.9e-149 3.1.3.48 T Pfam:Y_phosphatase3C
AMGAALFI_01862 5.5e-56 pduU E BMC
AMGAALFI_01863 2.2e-221 ackA 2.7.2.1, 2.7.2.15 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AMGAALFI_01864 1.3e-210 pduQ C Iron-containing alcohol dehydrogenase
AMGAALFI_01865 3.1e-270 pduP 1.2.1.87 C Aldehyde dehydrogenase family
AMGAALFI_01866 7.4e-80 pduO S Haem-degrading
AMGAALFI_01867 2.8e-105 pduO 2.5.1.17 S Cobalamin adenosyltransferase
AMGAALFI_01868 1.8e-41 ccmL CQ Ethanolamine utilisation protein EutN/carboxysome
AMGAALFI_01869 6.4e-90 S Putative propanediol utilisation
AMGAALFI_01870 4.2e-118 pduL 2.3.1.222, 2.3.1.8 Q Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate
AMGAALFI_01871 7.6e-43 pduA_4 CQ BMC
AMGAALFI_01872 5.1e-75 pduK CQ BMC
AMGAALFI_01873 1.7e-60 pduH S Dehydratase medium subunit
AMGAALFI_01874 0.0 pduG D Diol dehydratase reactivase ATPase-like domain
AMGAALFI_01875 2.1e-80 pduE 4.2.1.28 Q Dehydratase small subunit
AMGAALFI_01876 3.8e-128 pduD 4.2.1.28, 4.2.1.30 Q Dehydratase medium subunit
AMGAALFI_01877 0.0 pduC 4.2.1.28 Q Dehydratase large subunit
AMGAALFI_01878 2.7e-134 pduB E BMC
AMGAALFI_01879 6.2e-42 pduA_4 CQ BMC
AMGAALFI_01880 3e-201 K helix_turn_helix, arabinose operon control protein
AMGAALFI_01881 4.1e-150 eutJ E Hsp70 protein
AMGAALFI_01882 5.4e-135 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
AMGAALFI_01883 9e-167
AMGAALFI_01884 3e-164 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
AMGAALFI_01885 1.8e-177 S AI-2E family transporter
AMGAALFI_01886 4.2e-135 XK27_07210 6.1.1.6 S B3 4 domain
AMGAALFI_01887 1.7e-78 yybA 2.3.1.57 K Transcriptional regulator
AMGAALFI_01888 6.1e-91 M1-874 K Domain of unknown function (DUF1836)
AMGAALFI_01889 7.2e-92 1.14.14.47, 1.6.5.3, 1.6.99.3 GM epimerase
AMGAALFI_01890 4.7e-157 ypdB V (ABC) transporter
AMGAALFI_01891 1.1e-242 yhdP S Transporter associated domain
AMGAALFI_01892 9.9e-85 nrdI F Belongs to the NrdI family
AMGAALFI_01893 1.4e-74 S 3-demethylubiquinone-9 3-methyltransferase
AMGAALFI_01894 3.6e-194 yeaN P Transporter, major facilitator family protein
AMGAALFI_01895 5.7e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AMGAALFI_01896 1.4e-275 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AMGAALFI_01897 1.1e-40
AMGAALFI_01898 0.0 lacS G Transporter
AMGAALFI_01899 1.5e-80 uspA T universal stress protein
AMGAALFI_01900 1.5e-80 K AsnC family
AMGAALFI_01901 1e-232 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
AMGAALFI_01902 1.7e-103 dedA 3.1.3.1 S SNARE associated Golgi protein
AMGAALFI_01903 9.8e-82 L transposase and inactivated derivatives, IS30 family
AMGAALFI_01904 2.8e-108 tra L Transposase and inactivated derivatives, IS30 family
AMGAALFI_01905 3.7e-182 galR K Transcriptional regulator
AMGAALFI_01906 1e-289 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
AMGAALFI_01907 1.2e-227 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AMGAALFI_01908 2.2e-187 celE 3.2.1.4 GH5,GH9 E GDSL-like Lipase/Acylhydrolase family
AMGAALFI_01909 1.4e-147 ptp3 3.1.3.48 T Tyrosine phosphatase family
AMGAALFI_01910 4.3e-94 yxkA S Phosphatidylethanolamine-binding protein
AMGAALFI_01911 9.1e-36
AMGAALFI_01912 9.1e-53
AMGAALFI_01913 4.6e-205
AMGAALFI_01914 1.5e-83 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
AMGAALFI_01915 1.8e-136 pnuC H nicotinamide mononucleotide transporter
AMGAALFI_01916 9.9e-160 ytbE 1.1.1.346 S Aldo keto reductase
AMGAALFI_01917 3.4e-126 K response regulator
AMGAALFI_01918 8.7e-184 T Histidine kinase-like ATPases
AMGAALFI_01919 6.8e-136 macB2 V ABC transporter, ATP-binding protein
AMGAALFI_01920 0.0 ysaB V FtsX-like permease family
AMGAALFI_01921 7.4e-160 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
AMGAALFI_01922 1.8e-170 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
AMGAALFI_01923 2.2e-287 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AMGAALFI_01924 3.9e-199 EGP Major facilitator Superfamily
AMGAALFI_01925 1.5e-91 ymdB S Macro domain protein
AMGAALFI_01926 3.9e-113 K Helix-turn-helix XRE-family like proteins
AMGAALFI_01927 0.0 pepO 3.4.24.71 O Peptidase family M13
AMGAALFI_01928 3.6e-48
AMGAALFI_01929 5.6e-247 S Putative metallopeptidase domain
AMGAALFI_01930 1.4e-209 3.1.3.1 S associated with various cellular activities
AMGAALFI_01931 5.2e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
AMGAALFI_01932 1.4e-65 yeaO S Protein of unknown function, DUF488
AMGAALFI_01934 6e-123 yrkL S Flavodoxin-like fold
AMGAALFI_01935 1.6e-54
AMGAALFI_01936 3.3e-18 S Domain of unknown function (DUF4767)
AMGAALFI_01937 2.4e-141 3.6.4.12 S PD-(D/E)XK nuclease family transposase
AMGAALFI_01938 1.1e-49
AMGAALFI_01939 1.4e-206 nrnB S DHHA1 domain
AMGAALFI_01940 1.3e-232 S Uncharacterized protein conserved in bacteria (DUF2325)
AMGAALFI_01941 9.9e-250 brnQ U Component of the transport system for branched-chain amino acids
AMGAALFI_01942 1.5e-106 NU mannosyl-glycoprotein
AMGAALFI_01943 1.8e-147 S Putative ABC-transporter type IV
AMGAALFI_01944 4.4e-275 S ABC transporter, ATP-binding protein
AMGAALFI_01945 2.9e-11
AMGAALFI_01947 1e-108 S Protein of unknown function (DUF3278)
AMGAALFI_01948 7.8e-14 relB L RelB antitoxin
AMGAALFI_01950 1e-78 M PFAM NLP P60 protein
AMGAALFI_01951 9.8e-183 ABC-SBP S ABC transporter
AMGAALFI_01952 8.6e-154 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
AMGAALFI_01953 3.7e-137 XK27_08845 S ABC transporter, ATP-binding protein
AMGAALFI_01954 5.1e-96 P Cadmium resistance transporter
AMGAALFI_01955 5.2e-56 K Transcriptional regulator, ArsR family
AMGAALFI_01956 1e-240 mepA V MATE efflux family protein
AMGAALFI_01957 1.5e-55 trxA O Belongs to the thioredoxin family
AMGAALFI_01958 2.3e-131 terC P membrane
AMGAALFI_01959 7.4e-177 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
AMGAALFI_01960 9.7e-169 corA P CorA-like Mg2+ transporter protein
AMGAALFI_01961 2.6e-285 pipD E Dipeptidase
AMGAALFI_01962 1.9e-242 pbuX F xanthine permease
AMGAALFI_01963 1.9e-248 nhaC C Na H antiporter NhaC
AMGAALFI_01964 7.1e-250 hisS 6.1.1.21 J histidyl-tRNA synthetase
AMGAALFI_01965 2.5e-97 S Family of unknown function (DUF5449)
AMGAALFI_01966 1.7e-184 4.1.1.22 H Histidine carboxylase PI chain
AMGAALFI_01967 5.5e-267 aaxC E Arginine ornithine antiporter
AMGAALFI_01968 2.1e-260 S Uncharacterised protein family (UPF0236)
AMGAALFI_01969 9.6e-286 S C4-dicarboxylate anaerobic carrier
AMGAALFI_01970 6.5e-127 pgm3 3.1.3.73 G phosphoglycerate mutase family
AMGAALFI_01971 1.3e-41
AMGAALFI_01972 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
AMGAALFI_01973 1.1e-211 gldA 1.1.1.6 C dehydrogenase
AMGAALFI_01974 7e-126 S Alpha beta hydrolase
AMGAALFI_01975 7.1e-220 dacA 3.4.16.4 M Belongs to the peptidase S11 family
AMGAALFI_01976 1.5e-103
AMGAALFI_01978 1.4e-124 yciB M ErfK YbiS YcfS YnhG
AMGAALFI_01979 8.8e-96 S Putative peptidoglycan binding domain
AMGAALFI_01980 7.7e-44 S Putative peptidoglycan binding domain
AMGAALFI_01981 9.9e-112 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
AMGAALFI_01982 2.4e-89
AMGAALFI_01983 5.2e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
AMGAALFI_01984 5.1e-218 yttB EGP Major facilitator Superfamily
AMGAALFI_01985 4.3e-104
AMGAALFI_01986 1e-24
AMGAALFI_01987 5.5e-175 scrR K Transcriptional regulator, LacI family
AMGAALFI_01988 2.5e-255 acm2 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AMGAALFI_01989 2.4e-50 czrA K Transcriptional regulator, ArsR family
AMGAALFI_01990 2.1e-38
AMGAALFI_01991 0.0 yhcA V ABC transporter, ATP-binding protein
AMGAALFI_01992 9.6e-121 devA 3.6.3.25 V ABC transporter, ATP-binding protein
AMGAALFI_01993 4e-174 hrtB V ABC transporter permease
AMGAALFI_01994 1.9e-89 ygfC K transcriptional regulator (TetR family)
AMGAALFI_01995 1.3e-190 tdh 1.1.1.14 E Alcohol dehydrogenase GroES-like domain
AMGAALFI_01996 1e-290 mntH P H( )-stimulated, divalent metal cation uptake system
AMGAALFI_01997 5.5e-36
AMGAALFI_01998 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AMGAALFI_02000 2.7e-92 yxiO S Vacuole effluxer Atg22 like
AMGAALFI_02001 4.9e-111 yxiO S Vacuole effluxer Atg22 like
AMGAALFI_02002 9.2e-258 npp S type I phosphodiesterase nucleotide pyrophosphatase
AMGAALFI_02003 1.4e-240 E amino acid
AMGAALFI_02004 3.2e-183 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AMGAALFI_02006 3.5e-28 WQ51_00220 K Helix-turn-helix XRE-family like proteins
AMGAALFI_02007 4.2e-15 S Protein of unknown function (DUF3278)
AMGAALFI_02008 4.2e-222 yxjG_1 E methionine synthase, vitamin-B12 independent
AMGAALFI_02009 1.6e-41 S Cytochrome B5
AMGAALFI_02010 5.4e-09 S Cytochrome B5
AMGAALFI_02011 1.8e-39 S Cytochrome B5
AMGAALFI_02012 2.4e-77 elaA S Gnat family
AMGAALFI_02013 1.4e-121 GM NmrA-like family
AMGAALFI_02014 2.5e-52 hxlR K Transcriptional regulator, HxlR family
AMGAALFI_02015 6.7e-110 XK27_02070 S Nitroreductase family
AMGAALFI_02016 6.2e-84 K Transcriptional regulator, HxlR family
AMGAALFI_02017 8.5e-243
AMGAALFI_02018 2e-211 EGP Major facilitator Superfamily
AMGAALFI_02019 4.7e-257 pepC 3.4.22.40 E aminopeptidase
AMGAALFI_02020 9.6e-115 ylbE GM NAD dependent epimerase dehydratase family protein
AMGAALFI_02021 0.0 pepN 3.4.11.2 E aminopeptidase
AMGAALFI_02022 6.3e-94 folT S ECF transporter, substrate-specific component
AMGAALFI_02023 1.7e-198 asnA 6.3.1.1 F aspartate--ammonia ligase
AMGAALFI_02024 6e-257 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
AMGAALFI_02025 9.8e-126 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
AMGAALFI_02026 1.1e-206 2.7.7.65 T GGDEF domain
AMGAALFI_02027 7.5e-91
AMGAALFI_02028 4e-256 pgaC GT2 M Glycosyl transferase
AMGAALFI_02029 1.7e-159 T EAL domain
AMGAALFI_02030 3.3e-85 L PFAM transposase IS200-family protein
AMGAALFI_02031 3.4e-131 yfeJ 6.3.5.2 F glutamine amidotransferase
AMGAALFI_02032 1.1e-64 yneR
AMGAALFI_02033 1.6e-114 GM NAD(P)H-binding
AMGAALFI_02034 2.1e-189 S membrane
AMGAALFI_02035 1.8e-104 K Transcriptional regulator C-terminal region
AMGAALFI_02036 2.4e-164 akr5f 1.1.1.346 S reductase
AMGAALFI_02037 2.8e-157 K Transcriptional regulator
AMGAALFI_02038 6.1e-185 ansA 3.5.1.1 EJ L-asparaginase, type I
AMGAALFI_02039 1e-155 ypuA S Protein of unknown function (DUF1002)
AMGAALFI_02040 1.1e-228 aadAT EK Aminotransferase, class I
AMGAALFI_02041 3.8e-176 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
AMGAALFI_02042 9.2e-155 tesE Q hydratase
AMGAALFI_02043 4e-133 S Alpha beta hydrolase
AMGAALFI_02045 2.6e-89 lacA S transferase hexapeptide repeat
AMGAALFI_02046 2.1e-160 K Transcriptional regulator
AMGAALFI_02047 1.2e-88 C Flavodoxin
AMGAALFI_02048 6.3e-11 S Oxidoreductase, aldo keto reductase family protein
AMGAALFI_02049 8.6e-56 yphJ 4.1.1.44 S decarboxylase
AMGAALFI_02050 5.5e-102 M Protein of unknown function (DUF3737)
AMGAALFI_02051 2.3e-228 4.4.1.8 E Aminotransferase, class I
AMGAALFI_02052 4.7e-163 mleP3 S Membrane transport protein
AMGAALFI_02053 4.4e-126 1.1.1.193, 3.5.4.26 H RibD C-terminal domain
AMGAALFI_02055 1.1e-189 L PFAM Integrase catalytic region
AMGAALFI_02056 1.8e-40 1.1.1.193, 3.5.4.26 H RibD C-terminal domain
AMGAALFI_02057 3e-24
AMGAALFI_02058 1.1e-19 relB L Addiction module antitoxin, RelB DinJ family
AMGAALFI_02059 7.5e-91 XK27_08850 J Aminoacyl-tRNA editing domain
AMGAALFI_02060 1e-56 yphI 1.14.99.57 S Antibiotic biosynthesis monooxygenase
AMGAALFI_02061 7.7e-199 V Beta-lactamase
AMGAALFI_02062 3.2e-95 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
AMGAALFI_02063 1.7e-122 yhiD S MgtC family
AMGAALFI_02064 4e-121 S GyrI-like small molecule binding domain
AMGAALFI_02066 6.1e-125 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
AMGAALFI_02067 3.2e-50 azlD E Branched-chain amino acid transport
AMGAALFI_02068 2e-121 azlC E azaleucine resistance protein AzlC
AMGAALFI_02069 2.6e-266 K Aminotransferase class I and II
AMGAALFI_02070 1.9e-305 S amidohydrolase
AMGAALFI_02071 1.6e-165 S reductase
AMGAALFI_02072 1.6e-93 2.3.1.183 M Acetyltransferase GNAT family
AMGAALFI_02073 1.3e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
AMGAALFI_02074 6.4e-248 yxbA 6.3.1.12 S ATP-grasp enzyme
AMGAALFI_02075 4.8e-293 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AMGAALFI_02076 0.0 asnB 6.3.5.4 E Asparagine synthase
AMGAALFI_02077 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
AMGAALFI_02078 7.1e-256 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
AMGAALFI_02079 4.1e-136 jag S R3H domain protein
AMGAALFI_02080 4.5e-130 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
AMGAALFI_02081 1.2e-58 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
AMGAALFI_02082 3.4e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)