ORF_ID e_value Gene_name EC_number CAZy COGs Description
PAJPMEEK_00001 3e-251 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PAJPMEEK_00002 1.6e-205 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PAJPMEEK_00003 2.4e-33 yaaA S S4 domain
PAJPMEEK_00004 1.9e-206 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PAJPMEEK_00005 8.1e-38 yaaB S Domain of unknown function (DUF370)
PAJPMEEK_00006 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAJPMEEK_00007 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PAJPMEEK_00008 3.4e-39 S COG NOG14552 non supervised orthologous group
PAJPMEEK_00011 6.7e-184 yaaC S YaaC-like Protein
PAJPMEEK_00012 8e-274 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PAJPMEEK_00013 1.2e-249 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PAJPMEEK_00014 5.7e-158 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
PAJPMEEK_00015 2.5e-109 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
PAJPMEEK_00016 1.6e-206 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PAJPMEEK_00017 1.5e-203 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PAJPMEEK_00018 1.3e-09
PAJPMEEK_00019 4.1e-121 dck 2.7.1.113, 2.7.1.74, 2.7.1.76 F Deoxycytidine kinase
PAJPMEEK_00020 3.2e-115 dgk 2.7.1.113, 2.7.1.74, 2.7.1.76 F Deoxyguanosine kinase
PAJPMEEK_00021 3.8e-211 yaaH M Glycoside Hydrolase Family
PAJPMEEK_00022 7.5e-100 yaaI Q COG1335 Amidases related to nicotinamidase
PAJPMEEK_00023 3.5e-85 tadA 3.5.4.1, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PAJPMEEK_00024 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAJPMEEK_00025 5.9e-36 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PAJPMEEK_00026 2.3e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PAJPMEEK_00027 3.6e-32 yaaL S Protein of unknown function (DUF2508)
PAJPMEEK_00028 9.6e-37 bofA S Sigma-K factor-processing regulatory protein BofA
PAJPMEEK_00029 3.4e-39 S COG NOG14552 non supervised orthologous group
PAJPMEEK_00032 2.2e-30 csfB S Inhibitor of sigma-G Gin
PAJPMEEK_00033 2.3e-97 xpaC S 5-bromo-4-chloroindolyl phosphate hydrolysis protein
PAJPMEEK_00034 9.3e-190 yaaN P Belongs to the TelA family
PAJPMEEK_00035 3.4e-269 adiA 4.1.1.17, 4.1.1.18, 4.1.1.19 E Orn Lys Arg decarboxylase
PAJPMEEK_00036 3.4e-112 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PAJPMEEK_00037 7.5e-55 yaaQ S protein conserved in bacteria
PAJPMEEK_00038 1.2e-71 yaaR S protein conserved in bacteria
PAJPMEEK_00039 1.3e-182 holB 2.7.7.7 L DNA polymerase III
PAJPMEEK_00040 8.8e-145 yaaT S stage 0 sporulation protein
PAJPMEEK_00041 7.7e-37 yabA L Involved in initiation control of chromosome replication
PAJPMEEK_00042 1.9e-138 yabB 2.1.1.223 S Conserved hypothetical protein 95
PAJPMEEK_00043 4.7e-48 yazA L endonuclease containing a URI domain
PAJPMEEK_00044 4.5e-155 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PAJPMEEK_00045 8.8e-44 abrB K COG2002 Regulators of stationary sporulation gene expression
PAJPMEEK_00046 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PAJPMEEK_00047 2.2e-142 tatD L hydrolase, TatD
PAJPMEEK_00048 1.8e-232 rpfB GH23 T protein conserved in bacteria
PAJPMEEK_00049 2.1e-97 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PAJPMEEK_00050 3e-159 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PAJPMEEK_00051 1.9e-145 yabG S peptidase
PAJPMEEK_00052 7.8e-39 veg S protein conserved in bacteria
PAJPMEEK_00053 2.9e-27 sspF S DNA topological change
PAJPMEEK_00054 7.8e-160 ispE 2.1.1.182, 2.7.1.148 I Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PAJPMEEK_00055 1.6e-152 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
PAJPMEEK_00056 5.1e-63 yabJ 3.5.99.10 J translation initiation inhibitor, yjgF family
PAJPMEEK_00057 1.8e-47 spoVG D Essential for sporulation. Interferes with or is a negative regulator of the pathway leading to asymmetric septation
PAJPMEEK_00058 9.2e-248 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PAJPMEEK_00059 7.2e-175 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PAJPMEEK_00060 2e-106 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PAJPMEEK_00061 4.2e-106 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PAJPMEEK_00062 3.7e-40 yabK S Peptide ABC transporter permease
PAJPMEEK_00063 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PAJPMEEK_00064 6.2e-91 spoVT K stage V sporulation protein
PAJPMEEK_00065 2.2e-285 yabM S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PAJPMEEK_00066 5.4e-278 mazG 3.6.1.66, 3.6.1.9 S COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like
PAJPMEEK_00067 5.6e-37 yabO J COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
PAJPMEEK_00068 1.9e-49 yabP S Sporulation protein YabP
PAJPMEEK_00069 5.8e-104 yabQ S spore cortex biosynthesis protein
PAJPMEEK_00070 4.1e-57 divIC D Septum formation initiator
PAJPMEEK_00071 1.1e-57 yabR J RNA binding protein (contains ribosomal protein S1 domain)
PAJPMEEK_00074 0.0 spoIIE 3.1.3.16, 3.1.3.3 KT stage II sporulation protein E
PAJPMEEK_00075 1.1e-122 yabS S protein containing a von Willebrand factor type A (vWA) domain
PAJPMEEK_00076 2.1e-185 KLT serine threonine protein kinase
PAJPMEEK_00077 2.9e-273 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PAJPMEEK_00078 5.1e-93 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PAJPMEEK_00079 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PAJPMEEK_00080 1.4e-138 coaX 2.7.1.33 F Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PAJPMEEK_00081 1.1e-161 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PAJPMEEK_00082 3.1e-156 yacD 5.2.1.8 O peptidyl-prolyl isomerase
PAJPMEEK_00083 5.7e-169 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PAJPMEEK_00084 1e-270 pabB 2.6.1.85 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PAJPMEEK_00085 1e-107 pabA 2.6.1.85, 4.1.3.27 EH Anthranilate synthase
PAJPMEEK_00086 3.2e-161 pabC 2.6.1.42, 4.1.3.38 EH 4-amino-4-deoxychorismate lyase
PAJPMEEK_00087 3.2e-158 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PAJPMEEK_00088 2.4e-62 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PAJPMEEK_00089 9.9e-91 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
PAJPMEEK_00090 3.8e-28 yazB K transcriptional
PAJPMEEK_00091 1.9e-189 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PAJPMEEK_00092 8.4e-287 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PAJPMEEK_00093 3.4e-39 S COG NOG14552 non supervised orthologous group
PAJPMEEK_00095 1.3e-07
PAJPMEEK_00098 2e-08
PAJPMEEK_00103 3.4e-39 S COG NOG14552 non supervised orthologous group
PAJPMEEK_00104 7.5e-77 ctsR K Belongs to the CtsR family
PAJPMEEK_00105 4.1e-65 mcsA 2.7.14.1 S protein with conserved CXXC pairs
PAJPMEEK_00106 1.9e-203 mcsB 2.7.14.1, 2.7.3.2, 2.7.3.3 E Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity
PAJPMEEK_00107 0.0 clpC O Belongs to the ClpA ClpB family
PAJPMEEK_00108 7e-256 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PAJPMEEK_00109 6.4e-196 disA 2.7.7.85 L Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
PAJPMEEK_00110 9.4e-195 yacL S COG4956 Integral membrane protein (PIN domain superfamily)
PAJPMEEK_00111 3.8e-125 ispD 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PAJPMEEK_00112 7e-86 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 I Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PAJPMEEK_00113 8.1e-279 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PAJPMEEK_00114 1.6e-117 cysE 2.3.1.30 E Serine acetyltransferase
PAJPMEEK_00115 6.2e-268 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PAJPMEEK_00116 1e-72 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PAJPMEEK_00117 1.7e-134 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PAJPMEEK_00118 4.2e-89 yacP S RNA-binding protein containing a PIN domain
PAJPMEEK_00119 8.9e-116 sigH K Belongs to the sigma-70 factor family
PAJPMEEK_00120 7.8e-22 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PAJPMEEK_00121 3.2e-96 nusG K Participates in transcription elongation, termination and antitermination
PAJPMEEK_00122 2.8e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PAJPMEEK_00123 4.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PAJPMEEK_00124 3e-79 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PAJPMEEK_00125 1.3e-42 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PAJPMEEK_00126 9.7e-109 rsmC 2.1.1.172 J Methyltransferase
PAJPMEEK_00127 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAJPMEEK_00128 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAJPMEEK_00129 5.5e-34 ybxF J Belongs to the eukaryotic ribosomal protein eL8 family
PAJPMEEK_00130 6.5e-72 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PAJPMEEK_00131 7.9e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PAJPMEEK_00132 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PAJPMEEK_00133 6.1e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PAJPMEEK_00134 5.2e-189 ybaC 3.4.11.5 S Alpha/beta hydrolase family
PAJPMEEK_00135 7.5e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PAJPMEEK_00136 9.8e-112 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PAJPMEEK_00137 2.3e-105 rplD J Forms part of the polypeptide exit tunnel
PAJPMEEK_00138 1.2e-43 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PAJPMEEK_00139 1.5e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PAJPMEEK_00140 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PAJPMEEK_00141 4.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PAJPMEEK_00142 8e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PAJPMEEK_00143 1.3e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PAJPMEEK_00144 1.7e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
PAJPMEEK_00145 2.7e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PAJPMEEK_00146 2.3e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PAJPMEEK_00147 6.2e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PAJPMEEK_00148 6e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PAJPMEEK_00149 3.4e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PAJPMEEK_00150 2.3e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PAJPMEEK_00151 7.9e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PAJPMEEK_00152 1.2e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PAJPMEEK_00153 2.4e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PAJPMEEK_00154 1.9e-23 rpmD J Ribosomal protein L30
PAJPMEEK_00155 1.1e-72 rplO J binds to the 23S rRNA
PAJPMEEK_00156 3.5e-233 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PAJPMEEK_00157 2.6e-123 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PAJPMEEK_00158 4.8e-142 map 3.4.11.18 E Methionine aminopeptidase
PAJPMEEK_00159 1.1e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PAJPMEEK_00160 4.2e-13 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PAJPMEEK_00161 4e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PAJPMEEK_00162 1.3e-64 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PAJPMEEK_00163 2.4e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PAJPMEEK_00164 4.7e-58 rplQ J Ribosomal protein L17
PAJPMEEK_00165 3.9e-156 cbiO P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAJPMEEK_00166 2.5e-150 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAJPMEEK_00167 1.2e-138 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PAJPMEEK_00168 1.9e-143 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PAJPMEEK_00169 6.4e-78 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PAJPMEEK_00170 1.6e-64 rpsI J Belongs to the universal ribosomal protein uS9 family
PAJPMEEK_00171 8.2e-145 ybaJ Q Methyltransferase domain
PAJPMEEK_00172 1e-81 yizA S Damage-inducible protein DinB
PAJPMEEK_00173 4.5e-79 ybaK S Protein of unknown function (DUF2521)
PAJPMEEK_00174 2.1e-134 cwlD 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
PAJPMEEK_00175 6.7e-198 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PAJPMEEK_00176 7.6e-76 gerD
PAJPMEEK_00177 6e-103 kbaA 2.7.8.43 S Involved in the activation of the KinB signaling pathway of sporulation
PAJPMEEK_00178 4.2e-133 pdaB 3.5.1.104 G Polysaccharide deacetylase
PAJPMEEK_00179 3.4e-39 S COG NOG14552 non supervised orthologous group
PAJPMEEK_00182 3.5e-08
PAJPMEEK_00185 3.4e-39 S COG NOG14552 non supervised orthologous group
PAJPMEEK_00186 5e-221 glcP G Major Facilitator Superfamily
PAJPMEEK_00187 5.5e-247 dat 2.6.1.19 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PAJPMEEK_00188 1.1e-180 suhB 3.1.3.25, 3.1.3.7 G inositol monophosphate 1-phosphatase activity
PAJPMEEK_00189 2.9e-201 1.1.1.14, 1.1.1.303, 1.1.1.4 E alcohol dehydrogenase
PAJPMEEK_00190 1e-225 ybaR P COG0659 Sulfate permease and related transporters (MFS superfamily)
PAJPMEEK_00191 3.7e-174 ybaS 1.1.1.58 S Na -dependent transporter
PAJPMEEK_00192 2.7e-116 ybbA S Putative esterase
PAJPMEEK_00193 8e-180 feuC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PAJPMEEK_00194 2.8e-177 feuB P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PAJPMEEK_00195 5.7e-172 feuA P Iron-uptake system-binding protein
PAJPMEEK_00196 0.0 ybbB K COG2207 AraC-type DNA-binding domain-containing proteins
PAJPMEEK_00197 1.1e-236 ybbC 3.2.1.52 S protein conserved in bacteria
PAJPMEEK_00198 0.0 ybbD 3.2.1.52 G Belongs to the glycosyl hydrolase 3 family
PAJPMEEK_00199 2.1e-246 yfeW 3.4.16.4 V Belongs to the UPF0214 family
PAJPMEEK_00200 1.8e-240 ybbF 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PAJPMEEK_00201 4.4e-161 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PAJPMEEK_00202 3.7e-87 ybbJ J acetyltransferase
PAJPMEEK_00203 2.3e-78 ybbK 2.4.2.1, 6.3.2.4 S Protein of unknown function (DUF523)
PAJPMEEK_00209 1.4e-98 sigW K Belongs to the sigma-70 factor family. ECF subfamily
PAJPMEEK_00210 7.7e-117 rsiW K Is the anti-sigma factor for SigW. The presence of RsiW leads to the inactivation of SigW, and its proteolytic destruction to sigma-W activation
PAJPMEEK_00211 1e-145 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PAJPMEEK_00212 1.6e-226 ybbR S protein conserved in bacteria
PAJPMEEK_00213 3.5e-252 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PAJPMEEK_00214 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PAJPMEEK_00216 1.9e-100 ybdN
PAJPMEEK_00217 3.2e-132 ybdO S Domain of unknown function (DUF4885)
PAJPMEEK_00218 2.1e-162 dkgB S Aldo/keto reductase family
PAJPMEEK_00219 1e-93 yxaC M effector of murein hydrolase
PAJPMEEK_00220 1.2e-51 S LrgA family
PAJPMEEK_00221 8e-73 yxaD K helix_turn_helix multiple antibiotic resistance protein
PAJPMEEK_00222 8.9e-259 yifK E COG1113 Gamma-aminobutyrate permease and related permeases
PAJPMEEK_00223 1.2e-94 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PAJPMEEK_00224 5.9e-200 T COG4585 Signal transduction histidine kinase
PAJPMEEK_00225 2.5e-107 KT LuxR family transcriptional regulator
PAJPMEEK_00226 2.4e-167 V COG1131 ABC-type multidrug transport system, ATPase component
PAJPMEEK_00227 2e-206 V COG0842 ABC-type multidrug transport system, permease component
PAJPMEEK_00228 5.9e-200 V ABC-2 family transporter protein
PAJPMEEK_00229 1.3e-24
PAJPMEEK_00230 2.9e-76 S Domain of unknown function (DUF4879)
PAJPMEEK_00231 1.3e-38 csgA S Sigma-G-dependent sporulation-specific SASP protein
PAJPMEEK_00232 8.6e-109 yqeB
PAJPMEEK_00233 9.2e-40 ybyB
PAJPMEEK_00234 2.5e-292 ybeC E amino acid
PAJPMEEK_00236 8.5e-56
PAJPMEEK_00237 3.4e-15 S Protein of unknown function (DUF2651)
PAJPMEEK_00238 2.6e-166 glpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PAJPMEEK_00239 1.7e-259 glpT G -transporter
PAJPMEEK_00240 1.3e-16 S Protein of unknown function (DUF2651)
PAJPMEEK_00241 5e-212 hpaB 1.14.14.9 Q COG2368 Aromatic ring hydroxylase
PAJPMEEK_00243 0.0 ybfG 3.2.1.132 M Domain of unknown function (DUF1906)
PAJPMEEK_00244 6e-31
PAJPMEEK_00245 3.5e-82 K Helix-turn-helix XRE-family like proteins
PAJPMEEK_00246 1.7e-201 gldA 1.1.1.1, 1.1.1.6 C COG0371 Glycerol dehydrogenase and related enzymes
PAJPMEEK_00247 1.1e-212 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PAJPMEEK_00248 5e-93 pssA 2.7.8.8 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PAJPMEEK_00249 1.9e-86 ybfM S SNARE associated Golgi protein
PAJPMEEK_00250 6.6e-153 psd 4.1.1.65 I Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)
PAJPMEEK_00251 1.9e-43 ybfN
PAJPMEEK_00252 6.6e-192 yceA S Belongs to the UPF0176 family
PAJPMEEK_00253 1.9e-215 gltP C Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PAJPMEEK_00254 4.7e-200 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PAJPMEEK_00255 6.1e-258 mmuP E amino acid
PAJPMEEK_00256 4.6e-182 mmuM 1.5.1.20, 2.1.1.10 H homocysteine
PAJPMEEK_00257 2.1e-258 agcS E Sodium alanine symporter
PAJPMEEK_00258 1.4e-189 glsA 3.5.1.2 E Belongs to the glutaminase family
PAJPMEEK_00259 2.9e-211 phoQ 2.7.13.3 T Histidine kinase
PAJPMEEK_00260 1.9e-172 glnL T Regulator
PAJPMEEK_00261 8.2e-26 rtpA K Tryptophan RNA-binding attenuator protein inhibitory protein
PAJPMEEK_00262 6.7e-22 L Transposase
PAJPMEEK_00263 2e-155 fieF P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PAJPMEEK_00264 1.5e-112 ydfN C nitroreductase
PAJPMEEK_00265 7.6e-185 ydfO E COG0346 Lactoylglutathione lyase and related lyases
PAJPMEEK_00266 1.5e-62 mhqP S DoxX
PAJPMEEK_00267 1.3e-55 traF CO Thioredoxin
PAJPMEEK_00268 1.3e-61 ycbP S Protein of unknown function (DUF2512)
PAJPMEEK_00269 5.1e-80 sleB 3.5.1.28 M Cell wall
PAJPMEEK_00270 0.0 phoD 3.1.3.1 P COG3540 Phosphodiesterase alkaline phosphatase D
PAJPMEEK_00271 4.4e-26 tatA U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
PAJPMEEK_00272 1.4e-125 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PAJPMEEK_00273 1.1e-118 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PAJPMEEK_00274 1.8e-209 ycbU E Selenocysteine lyase
PAJPMEEK_00275 2.6e-237 lmrB EGP the major facilitator superfamily
PAJPMEEK_00276 1.2e-100 yxaF K Transcriptional regulator
PAJPMEEK_00277 4.7e-202 ansB 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
PAJPMEEK_00278 5.7e-115 lip 3.1.1.3 S acetyltransferases and hydrolases with the alpha beta hydrolase fold
PAJPMEEK_00279 4.4e-197 yccF K DNA-templated transcriptional preinitiation complex assembly
PAJPMEEK_00280 8.6e-173 yccK C Aldo keto reductase
PAJPMEEK_00281 1e-176 ycdA S Domain of unknown function (DUF5105)
PAJPMEEK_00282 6e-271 ycdB K Belongs to the sigma-70 factor family. ECF subfamily
PAJPMEEK_00283 4.3e-266 ycdC K Belongs to the sigma-70 factor family. ECF subfamily
PAJPMEEK_00284 6.2e-93 cwlK M D-alanyl-D-alanine carboxypeptidase
PAJPMEEK_00285 4.6e-189 S response regulator aspartate phosphatase
PAJPMEEK_00286 2.3e-139 IQ Enoyl-(Acyl carrier protein) reductase
PAJPMEEK_00287 0.0 ycdG 3.2.1.10 GH13 G COG0366 Glycosidases
PAJPMEEK_00288 2.2e-163 adcA P Belongs to the bacterial solute-binding protein 9 family
PAJPMEEK_00289 2.5e-132 adcC P 'COG1121 ABC-type Mn Zn transport systems, ATPase component'
PAJPMEEK_00290 1.5e-136 adcB P COG1108 ABC-type Mn2 Zn2 transport systems, permease components
PAJPMEEK_00291 4.7e-185 yceB C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PAJPMEEK_00292 5.6e-109 yceC 3.5.4.33 T proteins involved in stress response, homologs of TerZ and
PAJPMEEK_00293 3.7e-105 yceD T proteins involved in stress response, homologs of TerZ and
PAJPMEEK_00294 1e-107 yceE T proteins involved in stress response, homologs of TerZ and
PAJPMEEK_00295 9.7e-138 terC P Protein of unknown function (DUF475)
PAJPMEEK_00296 0.0 yceG S Putative component of 'biosynthetic module'
PAJPMEEK_00297 2.3e-193 yceH P Belongs to the TelA family
PAJPMEEK_00298 2.1e-216 naiP P Uncharacterised MFS-type transporter YbfB
PAJPMEEK_00299 3.9e-229 proV 3.6.3.32 E glycine betaine
PAJPMEEK_00300 1.6e-138 opuAB P glycine betaine
PAJPMEEK_00301 3.1e-164 opuAC E glycine betaine
PAJPMEEK_00302 7.8e-213 amhX S amidohydrolase
PAJPMEEK_00303 1.1e-230 ycgA S Membrane
PAJPMEEK_00304 2.2e-82 ycgB
PAJPMEEK_00305 0.0 amyE 3.2.1.1 GH13 G alpha-amylase
PAJPMEEK_00306 5.7e-180 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PAJPMEEK_00307 1.8e-260 mdr EGP Major facilitator Superfamily
PAJPMEEK_00308 3.7e-76 emrR K helix_turn_helix multiple antibiotic resistance protein
PAJPMEEK_00309 3e-113 ycgF E Lysine exporter protein LysE YggA
PAJPMEEK_00310 1.6e-153 yqcI S YqcI/YcgG family
PAJPMEEK_00311 9.8e-247 ycgH E COG1113 Gamma-aminobutyrate permease and related permeases
PAJPMEEK_00312 7.6e-114 ycgI S Domain of unknown function (DUF1989)
PAJPMEEK_00313 3.1e-150 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PAJPMEEK_00315 1.5e-109 tmrB S AAA domain
PAJPMEEK_00316 7.1e-144 4.2.1.118 G Xylose isomerase-like TIM barrel
PAJPMEEK_00317 4.7e-233 G COG0477 Permeases of the major facilitator superfamily
PAJPMEEK_00318 2.5e-103 aroK 2.7.1.71, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PAJPMEEK_00319 1.1e-183 cah 3.1.1.41 Q Acetyl xylan esterase (AXE1)
PAJPMEEK_00320 1.8e-147 ycgL S Predicted nucleotidyltransferase
PAJPMEEK_00321 2.3e-170 ycgM E Proline dehydrogenase
PAJPMEEK_00322 1.1e-292 rocA 1.2.1.88, 1.5.5.2 C Belongs to the aldehyde dehydrogenase family. RocA subfamily
PAJPMEEK_00323 6.4e-244 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PAJPMEEK_00324 1.1e-226 ycgP QT COG2508 Regulator of polyketide synthase expression
PAJPMEEK_00325 3.2e-189 ycgT 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
PAJPMEEK_00326 5.1e-281 cobA 2.1.1.107, 4.2.1.75 H Belongs to the precorrin methyltransferase family
PAJPMEEK_00327 3.5e-57 nirD 1.7.1.15 P Nitrite reductase
PAJPMEEK_00328 0.0 nirB 1.7.1.15 C Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
PAJPMEEK_00329 0.0 nasC C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PAJPMEEK_00330 0.0 nirB 1.7.1.15 C Assimilatory nitrate reductase (electron transfer subunit)
PAJPMEEK_00331 2.4e-223 nasA P COG2223 Nitrate nitrite transporter
PAJPMEEK_00332 1.3e-229 yciC S GTPases (G3E family)
PAJPMEEK_00333 2.1e-221 adhB 1.1.1.1, 1.1.1.14, 1.1.1.284 E COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
PAJPMEEK_00334 9.5e-74 yckC S membrane
PAJPMEEK_00335 2.2e-51 S Protein of unknown function (DUF2680)
PAJPMEEK_00336 1.2e-295 yckE 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PAJPMEEK_00337 3e-66 nin S Competence protein J (ComJ)
PAJPMEEK_00338 9.3e-77 nucA M Deoxyribonuclease NucA/NucB
PAJPMEEK_00339 3.3e-95 hxlB 4.1.2.43, 5.3.1.27 G SIS domain
PAJPMEEK_00340 5.1e-108 hxlA 4.1.2.43 G 3-hexulose-6-phosphate synthase
PAJPMEEK_00341 2.8e-63 hxlR K transcriptional
PAJPMEEK_00342 0.0 srfAA Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAJPMEEK_00343 0.0 srfAB Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAJPMEEK_00344 0.0 srfAC Q COG1020 Non-ribosomal peptide synthetase modules and related proteins
PAJPMEEK_00345 1.5e-140 srfAD Q thioesterase
PAJPMEEK_00346 7.2e-250 bamJ E Aminotransferase class I and II
PAJPMEEK_00347 4.8e-64 S YcxB-like protein
PAJPMEEK_00349 7.8e-169 ycxC EG EamA-like transporter family
PAJPMEEK_00350 2.6e-247 ycxD K GntR family transcriptional regulator
PAJPMEEK_00351 2.2e-130 acpT 2.7.8.7 H Belongs to the P-Pant transferase superfamily
PAJPMEEK_00352 1.3e-111 yczE S membrane
PAJPMEEK_00353 1.4e-133 tcyC 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
PAJPMEEK_00354 6.4e-120 tcyB P COG0765 ABC-type amino acid transport system, permease component
PAJPMEEK_00355 1.6e-143 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PAJPMEEK_00356 7.3e-158 bsdA K LysR substrate binding domain
PAJPMEEK_00357 9.3e-101 ubiX 2.5.1.129 H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
PAJPMEEK_00358 2.4e-283 yclC 4.1.1.61 H Decarboxylase involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions. It is able to catalyze the reversible decarboxylation of 4-hydroxybenzoate
PAJPMEEK_00359 2e-38 bsdD 4.1.1.61 S response to toxic substance
PAJPMEEK_00360 2e-77 yclD
PAJPMEEK_00361 3.2e-270 dtpT E amino acid peptide transporter
PAJPMEEK_00362 4.2e-282 yclG M Pectate lyase superfamily protein
PAJPMEEK_00364 8.3e-296 gerKA EG Spore germination protein
PAJPMEEK_00365 1.1e-236 gerKC S spore germination
PAJPMEEK_00366 5.1e-196 gerKB F Spore germination protein
PAJPMEEK_00367 3.4e-255 yxeK C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PAJPMEEK_00368 1.8e-92 yxeL K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PAJPMEEK_00369 1.2e-143 yxeM M Belongs to the bacterial solute-binding protein 3 family
PAJPMEEK_00370 3.5e-115 yxeN P COG0765 ABC-type amino acid transport system, permease component
PAJPMEEK_00371 4.1e-133 yxeO 3.6.3.21 P ABC transporter, ATP-binding protein
PAJPMEEK_00372 2.3e-220 yxeP 3.5.1.47 E hydrolase activity
PAJPMEEK_00373 4.2e-253 yxeQ S MmgE/PrpD family
PAJPMEEK_00374 7.3e-121 yclH P ABC transporter
PAJPMEEK_00375 6.3e-231 yclI V ABC transporter (permease) YclI
PAJPMEEK_00376 1.4e-127 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAJPMEEK_00377 1.1e-262 T PhoQ Sensor
PAJPMEEK_00378 1.9e-81 S aspartate phosphatase
PAJPMEEK_00380 7.7e-255 lysC 2.7.2.4 E Belongs to the aspartokinase family
PAJPMEEK_00381 2.3e-165 yclN P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PAJPMEEK_00382 1e-165 fatC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PAJPMEEK_00383 1.8e-136 yclP 3.6.3.34 P ABC transporter, ATP-binding protein
PAJPMEEK_00384 2.1e-174 yclQ P COG4607 ABC-type enterochelin transport system, periplasmic component
PAJPMEEK_00385 3.3e-248 ycnB EGP Major facilitator Superfamily
PAJPMEEK_00386 1.6e-152 ycnC K Transcriptional regulator
PAJPMEEK_00387 2.3e-136 nfrA2 1.5.1.38, 1.5.1.39 C Nitroreductase family
PAJPMEEK_00388 1e-44 ycnE S Monooxygenase
PAJPMEEK_00389 8.8e-53 yczG K helix_turn_helix, Arsenical Resistance Operon Repressor
PAJPMEEK_00390 1.4e-264 gabR K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PAJPMEEK_00391 5.3e-221 gabT 2.6.1.19, 2.6.1.22 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PAJPMEEK_00392 1.4e-264 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PAJPMEEK_00393 1.1e-53 L COG2963 Transposase and inactivated derivatives
PAJPMEEK_00394 3.6e-134 L Molecular Function DNA binding, Biological Process DNA recombination
PAJPMEEK_00395 3.6e-149 glcU U Glucose uptake
PAJPMEEK_00396 1.1e-144 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PAJPMEEK_00397 3.5e-98 ycnI S protein conserved in bacteria
PAJPMEEK_00398 6.5e-301 ycnJ P protein, homolog of Cu resistance protein CopC
PAJPMEEK_00399 5e-107 ycnK K COG1349 Transcriptional regulators of sugar metabolism
PAJPMEEK_00400 1.6e-55
PAJPMEEK_00401 1.1e-227 mtlA 2.7.1.197 G COG2213 Phosphotransferase system, mannitol-specific IIBC component
PAJPMEEK_00402 5.2e-72 mtlF 2.7.1.197 G COG4668 Mannitol fructose-specific phosphotransferase system, IIA domain
PAJPMEEK_00403 6.2e-210 mtlD 1.1.1.17 G COG0246 Mannitol-1-phosphate altronate dehydrogenases
PAJPMEEK_00404 3.2e-68 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
PAJPMEEK_00406 8e-137 ycsE 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
PAJPMEEK_00407 2.7e-140 ycsF S Belongs to the UPF0271 (lamB) family
PAJPMEEK_00408 4.7e-211 ycsG P COG1914 Mn2 and Fe2 transporters of the NRAMP family
PAJPMEEK_00409 2.1e-151 ycsI S Belongs to the D-glutamate cyclase family
PAJPMEEK_00410 6e-137 kipI 3.5.1.54 E Allophanate hydrolase subunit 1
PAJPMEEK_00411 5.5e-189 kipA 6.3.4.6 E Allophanate hydrolase subunit 2
PAJPMEEK_00412 4e-131 kipR K Transcriptional regulator
PAJPMEEK_00413 9.3e-118 ycsK E anatomical structure formation involved in morphogenesis
PAJPMEEK_00415 5.1e-56 yczJ S biosynthesis
PAJPMEEK_00416 0.0 pbpC 3.4.16.4 M Penicillin-binding Protein
PAJPMEEK_00417 1.3e-173 ydhF S Oxidoreductase
PAJPMEEK_00418 0.0 mtlR K transcriptional regulator, MtlR
PAJPMEEK_00419 8.5e-287 ydaB IQ acyl-CoA ligase
PAJPMEEK_00420 3.7e-162 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PAJPMEEK_00421 6e-96 MA20_27600 5.3.1.15 S Cupin 2, conserved barrel domain protein
PAJPMEEK_00422 7.2e-115 rimL 1.1.1.25 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PAJPMEEK_00423 1.4e-77 ydaG 1.4.3.5 S general stress protein
PAJPMEEK_00424 1.2e-138 amj U Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane
PAJPMEEK_00425 1.1e-40 L transposase activity
PAJPMEEK_00426 5.6e-119 L Molecular Function DNA binding, Biological Process DNA recombination
PAJPMEEK_00427 1.3e-47 ydzA EGP Major facilitator Superfamily
PAJPMEEK_00428 1.5e-74 lrpC K Transcriptional regulator
PAJPMEEK_00429 0.0 topB 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PAJPMEEK_00430 1.3e-201 ydaJ M Belongs to the glycosyl hydrolase 8 (cellulase D) family
PAJPMEEK_00431 2.7e-149 ydaK T Diguanylate cyclase, GGDEF domain
PAJPMEEK_00432 0.0 ydaL S Uncharacterized protein conserved in bacteria (DUF2334)
PAJPMEEK_00433 5.5e-231 ydaM M Glycosyl transferase family group 2
PAJPMEEK_00434 0.0 ydaN S Bacterial cellulose synthase subunit
PAJPMEEK_00435 0.0 ydaO E amino acid
PAJPMEEK_00436 2.3e-75 mutT 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
PAJPMEEK_00437 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PAJPMEEK_00438 1.5e-63 K acetyltransferase
PAJPMEEK_00441 2.9e-33 xkdR S Protein of unknown function (DUF2577)
PAJPMEEK_00442 2.3e-109 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PAJPMEEK_00443 1.6e-34 xkdS S Protein of unknown function (DUF2634)
PAJPMEEK_00444 6.2e-21 xkdT S Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
PAJPMEEK_00446 2.5e-79
PAJPMEEK_00447 5.6e-98
PAJPMEEK_00448 7.2e-40
PAJPMEEK_00449 3.2e-226 mntH P H( )-stimulated, divalent metal cation uptake system
PAJPMEEK_00451 6.5e-34 ydaT
PAJPMEEK_00452 3.5e-70 yvaD S Family of unknown function (DUF5360)
PAJPMEEK_00453 4.1e-54 yvaE P Small Multidrug Resistance protein
PAJPMEEK_00454 1.2e-141 ydbA 3.6.3.4, 3.6.3.54 P EcsC protein family
PAJPMEEK_00456 8.2e-63 ydbB G Cupin domain
PAJPMEEK_00457 5.9e-61 ydbC S Domain of unknown function (DUF4937
PAJPMEEK_00458 6.5e-156 ydbD P Catalase
PAJPMEEK_00459 2.1e-199 dctB G COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component
PAJPMEEK_00460 1.6e-299 dctS 2.7.13.3 T Signal transduction histidine kinase regulating citrate malate metabolism
PAJPMEEK_00461 3.9e-119 dctR T COG4565 Response regulator of citrate malate metabolism
PAJPMEEK_00462 1.7e-224 dctA U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PAJPMEEK_00463 3.2e-160 ydbI S AI-2E family transporter
PAJPMEEK_00464 5e-173 ydbJ V ABC transporter, ATP-binding protein
PAJPMEEK_00465 7.4e-130 ydbK S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PAJPMEEK_00466 2.1e-52 ydbL
PAJPMEEK_00467 2.2e-207 ydbM 1.3.8.1 I acyl-CoA dehydrogenase
PAJPMEEK_00468 1.5e-10 S Fur-regulated basic protein B
PAJPMEEK_00469 5.8e-09 S Fur-regulated basic protein A
PAJPMEEK_00470 1.1e-119 yeaB P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PAJPMEEK_00471 8.5e-56 ydbP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PAJPMEEK_00472 3.2e-203 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PAJPMEEK_00473 2.8e-257 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PAJPMEEK_00474 1.3e-250 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PAJPMEEK_00475 1.3e-60 ydbS S Bacterial PH domain
PAJPMEEK_00476 2.8e-263 ydbT S Membrane
PAJPMEEK_00477 1.4e-107 ydcA 3.4.21.105 S membrane protein (homolog of Drosophila rhomboid)
PAJPMEEK_00478 4.7e-58 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PAJPMEEK_00479 2.6e-183 ydcC M COG2834 Outer membrane lipoprotein-sorting protein
PAJPMEEK_00480 2e-219 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PAJPMEEK_00481 8.1e-42 ndoAI K transcriptional regulators containing the CopG Arc MetJ DNA-binding domain and a metal-binding domain
PAJPMEEK_00482 2.5e-56 ndoA L Toxic component of a toxin-antitoxin (TA) module
PAJPMEEK_00483 6.1e-146 rsbR T Positive regulator of sigma-B
PAJPMEEK_00484 1.8e-57 rsbS T antagonist
PAJPMEEK_00485 3.8e-69 rsbT 2.7.11.1 T COG2172 Anti-sigma regulatory factor (Ser Thr protein kinase)
PAJPMEEK_00486 1.7e-187 rsbU 3.1.3.3 KT phosphatase
PAJPMEEK_00487 1.4e-53 rsbV T Belongs to the anti-sigma-factor antagonist family
PAJPMEEK_00488 1e-84 rsbW 2.7.11.1 F Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B)
PAJPMEEK_00489 1.4e-139 sigB K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PAJPMEEK_00490 9.7e-109 rsbX 3.1.3.16, 3.1.3.3 KT Sigma factor PP2C-like phosphatases
PAJPMEEK_00491 0.0 yhgF K COG2183 Transcriptional accessory protein
PAJPMEEK_00492 1.7e-14
PAJPMEEK_00493 1.1e-58 ydcK S Belongs to the SprT family
PAJPMEEK_00501 2.9e-168 L Belongs to the 'phage' integrase family
PAJPMEEK_00502 2.5e-14 nicK L Replication initiation factor
PAJPMEEK_00503 9.1e-31
PAJPMEEK_00508 4.8e-37
PAJPMEEK_00510 1.3e-34 yddB S Conjugative transposon protein TcpC
PAJPMEEK_00511 2e-50 S SMI1-KNR4 cell-wall
PAJPMEEK_00512 1.2e-202 L A nuclease of the HNH/ENDO VII superfamily with conserved LHH
PAJPMEEK_00513 2.9e-114 M1-798 KP helix_turn_helix, Arsenical Resistance Operon Repressor
PAJPMEEK_00514 1.3e-43 P Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
PAJPMEEK_00515 2.6e-204 ydeG EGP Major facilitator superfamily
PAJPMEEK_00516 2.2e-96 ywrO S Flavodoxin-like fold
PAJPMEEK_00517 3.4e-229 proP EGP Transporter
PAJPMEEK_00518 1.3e-48 ohrR K Transcriptional regulator
PAJPMEEK_00519 1.6e-73 S Domain of unknown function with cystatin-like fold (DUF4467)
PAJPMEEK_00520 1.2e-73 maoC I N-terminal half of MaoC dehydratase
PAJPMEEK_00521 3.2e-64 yyaQ S YjbR
PAJPMEEK_00522 3.3e-74 ywnA K Transcriptional regulator
PAJPMEEK_00523 4.9e-111 ywnB S NAD(P)H-binding
PAJPMEEK_00525 2.5e-135 F SEFIR domain
PAJPMEEK_00526 2.4e-178 C COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases
PAJPMEEK_00527 6.9e-56 K Transcriptional regulator
PAJPMEEK_00528 8.5e-198 des 1.14.19.23, 1.14.19.45 I fatty acid desaturase
PAJPMEEK_00529 1.4e-30 cspL K Cold shock
PAJPMEEK_00530 8e-79 carD K Transcription factor
PAJPMEEK_00531 9.2e-40 yrkD S protein conserved in bacteria
PAJPMEEK_00532 1.1e-83 yrkE O DsrE/DsrF/DrsH-like family
PAJPMEEK_00533 3.4e-64 P Rhodanese Homology Domain
PAJPMEEK_00534 3.8e-99 yrkF OP Belongs to the sulfur carrier protein TusA family
PAJPMEEK_00535 2.5e-198 yrkH P Rhodanese Homology Domain
PAJPMEEK_00536 5.4e-36 yrkI O Belongs to the sulfur carrier protein TusA family
PAJPMEEK_00537 1.7e-118 yrkJ S membrane transporter protein
PAJPMEEK_00538 3.3e-121 racX 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PAJPMEEK_00539 2.6e-103 S Protein of unknown function (DUF2812)
PAJPMEEK_00540 1.3e-51 K Transcriptional regulator PadR-like family
PAJPMEEK_00541 7.3e-183 S Patatin-like phospholipase
PAJPMEEK_00542 3.8e-84 S DinB superfamily
PAJPMEEK_00543 2.2e-63 G Cupin domain
PAJPMEEK_00546 6e-268 ygaK C COG0277 FAD FMN-containing dehydrogenases
PAJPMEEK_00547 3.9e-41 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PAJPMEEK_00548 4.5e-169 czcD P COG1230 Co Zn Cd efflux system component
PAJPMEEK_00549 9.8e-202 trkA P Oxidoreductase
PAJPMEEK_00551 4.7e-99 yrkC G Cupin domain
PAJPMEEK_00552 2.4e-86 ykkA S Protein of unknown function (DUF664)
PAJPMEEK_00553 7.9e-150 dapA_5 4.3.3.7 EM Dihydrodipicolinate synthetase family
PAJPMEEK_00555 1.6e-199 rlmN 2.1.1.192, 2.1.1.224 J Specifically methylates position 8 of adenine 2503 in 23S rRNA. Confers resistance to some classes of antibiotics
PAJPMEEK_00556 3.1e-52 ydeH
PAJPMEEK_00557 1.2e-169 S Sodium Bile acid symporter family
PAJPMEEK_00558 4e-203 adhA 1.1.1.1 C alcohol dehydrogenase
PAJPMEEK_00559 3.6e-67 yraB K helix_turn_helix, mercury resistance
PAJPMEEK_00560 2.1e-222 mleN_2 C antiporter
PAJPMEEK_00561 9.8e-266 K helix_turn_helix gluconate operon transcriptional repressor
PAJPMEEK_00562 3.3e-112 paiB K Transcriptional regulator
PAJPMEEK_00564 1.7e-105 ksgA1 I Ribosomal RNA adenine dimethylase
PAJPMEEK_00565 1.6e-123 T Transcriptional regulator
PAJPMEEK_00566 3.1e-190 T PhoQ Sensor
PAJPMEEK_00567 8.9e-105 S SNARE associated Golgi protein
PAJPMEEK_00568 2.4e-180 ydeR EGP Major facilitator Superfamily
PAJPMEEK_00569 1.9e-101 ydeS K Transcriptional regulator
PAJPMEEK_00570 1.7e-157 ydeK EG -transporter
PAJPMEEK_00571 2.8e-268 ydeL K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PAJPMEEK_00572 3.6e-48 yraD M Spore coat protein
PAJPMEEK_00573 2.8e-25 yraE
PAJPMEEK_00574 1.6e-221 adhB 1.1.1.1, 1.1.1.14, 1.1.1.284 E COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
PAJPMEEK_00575 2.2e-63 yraF M Spore coat protein
PAJPMEEK_00576 5.8e-36 yraG
PAJPMEEK_00577 1.2e-105 ybjJ G Major Facilitator Superfamily
PAJPMEEK_00578 9.8e-77 2.7.1.2 GK Transcriptional regulator
PAJPMEEK_00579 5.5e-71 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PAJPMEEK_00580 1.3e-216 ydfH 2.7.13.3 T Histidine kinase
PAJPMEEK_00581 3.7e-111 ydfI K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PAJPMEEK_00582 0.0 ydfJ S drug exporters of the RND superfamily
PAJPMEEK_00583 9.4e-135 puuD S Peptidase C26
PAJPMEEK_00584 2.2e-220 mmr U Major Facilitator Superfamily
PAJPMEEK_00585 1.8e-73 yffB K Transcriptional regulator
PAJPMEEK_00586 8e-299 expZ S ABC transporter
PAJPMEEK_00587 2.5e-100 ynaD J Acetyltransferase (GNAT) domain
PAJPMEEK_00588 7.2e-150 S Uncharacterized protein conserved in bacteria (DUF2179)
PAJPMEEK_00589 3e-196 gldA 1.1.1.6 C COG0371 Glycerol dehydrogenase and related enzymes
PAJPMEEK_00590 2.3e-210 tcaB EGP Major facilitator Superfamily
PAJPMEEK_00591 3.4e-225 fabF_1 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PAJPMEEK_00592 5e-156 K Helix-turn-helix XRE-family like proteins
PAJPMEEK_00593 1.3e-123 ydhB S membrane transporter protein
PAJPMEEK_00594 1.4e-80 bltD 2.3.1.57 K FR47-like protein
PAJPMEEK_00595 3.1e-150 bltR K helix_turn_helix, mercury resistance
PAJPMEEK_00596 3.6e-149 ydzE EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PAJPMEEK_00597 3.2e-115 yjhB 3.6.1.13, 3.6.1.55 F ADP-ribose pyrophosphatase
PAJPMEEK_00598 1.3e-145 ycgJ_1 Q ubiE/COQ5 methyltransferase family
PAJPMEEK_00599 2e-165 ycsA 1.1.1.83, 1.1.1.93, 4.1.1.73 CE Tartrate dehydrogenase
PAJPMEEK_00600 1.3e-120 ydhC K FCD
PAJPMEEK_00601 3.7e-229 ydhE CG COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
PAJPMEEK_00604 1.3e-265 pbpE V Beta-lactamase
PAJPMEEK_00606 2.5e-98 ydhK M Protein of unknown function (DUF1541)
PAJPMEEK_00607 1.2e-195 pbuE EGP Major facilitator Superfamily
PAJPMEEK_00608 1.3e-133 ydhQ K UTRA
PAJPMEEK_00609 2.6e-118 K FCD
PAJPMEEK_00610 7.4e-217 yeaN P COG2807 Cyanate permease
PAJPMEEK_00611 7.7e-49 sugE P Small Multidrug Resistance protein
PAJPMEEK_00612 2.3e-51 ykkC P Small Multidrug Resistance protein
PAJPMEEK_00613 5.3e-104 yvdT K Transcriptional regulator
PAJPMEEK_00614 9.3e-297 yveA E amino acid
PAJPMEEK_00615 5.5e-166 ydhU P Catalase
PAJPMEEK_00616 2.3e-81 yndB S Activator of Hsp90 ATPase homolog 1-like protein
PAJPMEEK_00617 1.1e-184 yhfP 1.1.1.1 C Quinone oxidoreductase
PAJPMEEK_00618 2e-253 iolT EGP Major facilitator Superfamily
PAJPMEEK_00621 3.4e-39 S COG NOG14552 non supervised orthologous group
PAJPMEEK_00622 7.8e-08
PAJPMEEK_00624 1.8e-184 thiL 2.7.4.16 H Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
PAJPMEEK_00625 4.1e-86 ydiB 2.7.1.221, 5.1.1.1 S ATPase or kinase
PAJPMEEK_00626 1.3e-125 yeaZ 2.3.1.234 O COG1214 Inactive homolog of metal-dependent proteases
PAJPMEEK_00627 2.4e-83 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PAJPMEEK_00628 4.6e-191 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PAJPMEEK_00629 0.0 ydiF S ABC transporter
PAJPMEEK_00630 1.2e-88 moaC 4.6.1.17 H Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
PAJPMEEK_00631 3e-116 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PAJPMEEK_00632 1.7e-18 tatA U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
PAJPMEEK_00633 1.4e-125 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PAJPMEEK_00634 1.7e-27 ydiK S Domain of unknown function (DUF4305)
PAJPMEEK_00635 4.3e-127 ydiL S CAAX protease self-immunity
PAJPMEEK_00636 1.3e-42 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PAJPMEEK_00637 7.5e-281 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PAJPMEEK_00639 2.2e-61
PAJPMEEK_00640 0.0 K NB-ARC domain
PAJPMEEK_00641 1.1e-200 gutB 1.1.1.14 E Dehydrogenase
PAJPMEEK_00642 7.5e-250 gutA G MFS/sugar transport protein
PAJPMEEK_00643 4.4e-172 ydjE 2.7.1.4 G pfkB family carbohydrate kinase
PAJPMEEK_00644 4.7e-30 yjdJ S Domain of unknown function (DUF4306)
PAJPMEEK_00645 3e-114 pspA KT Phage shock protein A
PAJPMEEK_00646 1.2e-178 ydjG 3.6.4.12 L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PAJPMEEK_00647 1.4e-120 ydjH S COG1512 Beta-propeller domains of methanol dehydrogenase type
PAJPMEEK_00648 5.7e-154 ydjI S virion core protein (lumpy skin disease virus)
PAJPMEEK_00649 0.0 yrhL I Acyltransferase family
PAJPMEEK_00650 2.3e-143 rsiV S Protein of unknown function (DUF3298)
PAJPMEEK_00651 4.3e-86 sigV K Belongs to the sigma-70 factor family. ECF subfamily
PAJPMEEK_00652 8.9e-195 bdhA 1.1.1.303, 1.1.1.4 E Dehydrogenase
PAJPMEEK_00653 1.2e-61 ydjM M Lytic transglycolase
PAJPMEEK_00654 2.7e-135 ydjN U Involved in the tonB-independent uptake of proteins
PAJPMEEK_00656 7.2e-35 ydjO S Cold-inducible protein YdjO
PAJPMEEK_00657 0.0 cotA 1.10.3.4, 1.16.3.3 Q multicopper oxidases
PAJPMEEK_00658 5.6e-245 gabP E COG1113 Gamma-aminobutyrate permease and related permeases
PAJPMEEK_00659 8.4e-154 yeaB P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PAJPMEEK_00660 4.6e-177 yeaC S COG0714 MoxR-like ATPases
PAJPMEEK_00661 4e-215 yeaD S conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
PAJPMEEK_00662 0.0 yebA E COG1305 Transglutaminase-like enzymes
PAJPMEEK_00663 2.2e-306 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PAJPMEEK_00664 1.7e-93 sigV K Belongs to the sigma-70 factor family. ECF subfamily
PAJPMEEK_00665 1.6e-263 S Domain of unknown function (DUF4179)
PAJPMEEK_00666 6.2e-209 pbuG S permease
PAJPMEEK_00667 2.1e-124 yebC M Membrane
PAJPMEEK_00669 2e-92 yebE S UPF0316 protein
PAJPMEEK_00670 6.1e-28 yebG S NETI protein
PAJPMEEK_00671 2.5e-83 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PAJPMEEK_00672 6.1e-224 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PAJPMEEK_00673 1.6e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PAJPMEEK_00674 4.1e-130 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PAJPMEEK_00675 2.2e-38 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PAJPMEEK_00676 2.3e-130 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PAJPMEEK_00677 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PAJPMEEK_00678 1.8e-270 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PAJPMEEK_00679 2.7e-183 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PAJPMEEK_00680 8.3e-105 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PAJPMEEK_00681 3.5e-288 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PAJPMEEK_00682 1.2e-233 purD 6.3.4.13 F Belongs to the GARS family
PAJPMEEK_00683 1.2e-25 S Protein of unknown function (DUF2892)
PAJPMEEK_00684 0.0 yerA 3.5.4.2 F adenine deaminase
PAJPMEEK_00685 5.2e-192 yerB S Protein of unknown function (DUF3048) C-terminal domain
PAJPMEEK_00686 2.4e-50 yerC S protein conserved in bacteria
PAJPMEEK_00687 2.3e-303 yerD 1.4.7.1 E Belongs to the glutamate synthase family
PAJPMEEK_00688 2.4e-127 pcrB I 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
PAJPMEEK_00689 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PAJPMEEK_00690 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PAJPMEEK_00691 1.4e-223 camS S COG4851 Protein involved in sex pheromone biosynthesis
PAJPMEEK_00692 1.5e-194 yerI S homoserine kinase type II (protein kinase fold)
PAJPMEEK_00693 1.3e-120 sapB S MgtC SapB transporter
PAJPMEEK_00694 7.1e-262 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PAJPMEEK_00695 1.6e-45 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PAJPMEEK_00696 4.6e-274 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PAJPMEEK_00697 5.2e-270 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PAJPMEEK_00698 4.8e-154 yerO K Transcriptional regulator
PAJPMEEK_00699 0.0 swrC V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PAJPMEEK_00700 1.6e-168 yegS 2.7.1.107 I COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
PAJPMEEK_00701 6e-247 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PAJPMEEK_00702 2.1e-79 KT COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PAJPMEEK_00704 1.7e-33 IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PAJPMEEK_00705 1.7e-62 fabZ 4.2.1.59 I 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
PAJPMEEK_00706 2.1e-194 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PAJPMEEK_00707 1.7e-131 2.3.1.179 I 3-oxoacyl-[acyl-carrier-protein] synthase activity
PAJPMEEK_00708 2.7e-110 IQ reductase
PAJPMEEK_00709 1.6e-158 cylA V AAA domain, putative AbiEii toxin, Type IV TA system
PAJPMEEK_00710 3.8e-138 cylB V ABC-2 type transporter
PAJPMEEK_00711 4.5e-53 S Protein of unknown function, DUF600
PAJPMEEK_00712 2.9e-95 yobL L nucleic acid phosphodiester bond hydrolysis
PAJPMEEK_00713 3.5e-43 S Immunity protein 22
PAJPMEEK_00714 1.1e-55 S LXG domain of WXG superfamily
PAJPMEEK_00715 1.3e-68 S Protein of unknown function, DUF600
PAJPMEEK_00716 2.1e-77 S Protein of unknown function, DUF600
PAJPMEEK_00717 1e-60 S Protein of unknown function, DUF600
PAJPMEEK_00718 0.0 yobL L nucleic acid phosphodiester bond hydrolysis
PAJPMEEK_00719 8e-126 yeeN K transcriptional regulatory protein
PAJPMEEK_00721 1.2e-44 cotJA S Spore coat associated protein JA (CotJA)
PAJPMEEK_00722 3.3e-45 cotJB S CotJB protein
PAJPMEEK_00723 8.9e-104 cotJC P Spore Coat
PAJPMEEK_00724 2e-97 yesJ K Acetyltransferase (GNAT) family
PAJPMEEK_00726 8.7e-122 yetF S membrane
PAJPMEEK_00727 5.7e-55 isdI 1.14.99.48, 1.14.99.57 S Antibiotic biosynthesis monooxygenase
PAJPMEEK_00728 2e-64 yetH E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PAJPMEEK_00729 3.4e-155 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PAJPMEEK_00730 1.2e-22 yezD S Uncharacterized small protein (DUF2292)
PAJPMEEK_00731 1.8e-55 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase activity
PAJPMEEK_00732 8.2e-106 yetJ S Belongs to the BI1 family
PAJPMEEK_00733 6.5e-90 yetL K helix_turn_helix multiple antibiotic resistance protein
PAJPMEEK_00734 6.9e-209 yetM CH FAD binding domain
PAJPMEEK_00735 2.9e-196 yetN S Protein of unknown function (DUF3900)
PAJPMEEK_00736 0.0 cypD 1.14.14.1, 1.6.2.4 C Belongs to the cytochrome P450 family
PAJPMEEK_00738 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
PAJPMEEK_00739 7.9e-148 rfbF 2.7.7.33 JM Nucleotidyl transferase
PAJPMEEK_00740 2.4e-172 yfnG 4.2.1.45 M dehydratase
PAJPMEEK_00741 1.6e-179 yfnF M Nucleotide-diphospho-sugar transferase
PAJPMEEK_00742 3.9e-223 yfnE 2.4.1.338 GT2 S Glycosyltransferase like family 2
PAJPMEEK_00743 5.6e-188 yfnD M Nucleotide-diphospho-sugar transferase
PAJPMEEK_00744 4.7e-219 fsr P COG0477 Permeases of the major facilitator superfamily
PAJPMEEK_00745 7.8e-247 yfnA E amino acid
PAJPMEEK_00746 5e-276 yfmT 1.2.1.3, 1.2.1.67 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PAJPMEEK_00747 9.8e-115 yfmS NT chemotaxis protein
PAJPMEEK_00748 6.8e-167 IQ Enoyl-(Acyl carrier protein) reductase
PAJPMEEK_00749 6.5e-209 M COG0463 Glycosyltransferases involved in cell wall biogenesis
PAJPMEEK_00750 0.0 yfmR S COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PAJPMEEK_00751 6.2e-70 yfmP K transcriptional
PAJPMEEK_00752 1e-207 yfmO EGP Major facilitator Superfamily
PAJPMEEK_00753 3.2e-297 yfmM S COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PAJPMEEK_00754 1.4e-206 yfmL 3.6.4.13 L COG0513 Superfamily II DNA and RNA helicases
PAJPMEEK_00755 3.5e-63 yfmK 2.3.1.128 K acetyltransferase
PAJPMEEK_00756 2.2e-190 yfmJ S N-terminal domain of oxidoreductase
PAJPMEEK_00757 1.7e-24 S Protein of unknown function (DUF3212)
PAJPMEEK_00758 1.3e-57 yflT S Heat induced stress protein YflT
PAJPMEEK_00759 9.1e-242 pel 4.2.2.10, 4.2.2.2 G Pectate lyase
PAJPMEEK_00760 3.5e-234 yflS P Sodium:sulfate symporter transmembrane region
PAJPMEEK_00761 1.8e-28 Q PFAM Collagen triple helix
PAJPMEEK_00764 4.1e-15 Q calcium- and calmodulin-responsive adenylate cyclase activity
PAJPMEEK_00767 6.8e-24 M1-820 Q Collagen triple helix repeat (20 copies)
PAJPMEEK_00768 0.0 ywpD T PhoQ Sensor
PAJPMEEK_00769 1.5e-152 M1-574 T Transcriptional regulatory protein, C terminal
PAJPMEEK_00770 0.0 M1-568 M cell wall anchor domain
PAJPMEEK_00771 2.7e-80 srtA 3.4.22.70 M Sortase family
PAJPMEEK_00772 4.6e-275 citS 2.7.13.3 T Signal transduction histidine kinase regulating citrate malate metabolism
PAJPMEEK_00773 9.5e-121 citT T response regulator
PAJPMEEK_00774 8.3e-179 yflP S Tripartite tricarboxylate transporter family receptor
PAJPMEEK_00775 1.4e-226 citM C Citrate transporter
PAJPMEEK_00776 2.5e-149 yflN S COG0491 Zn-dependent hydrolases, including glyoxylases
PAJPMEEK_00777 5.5e-219 nos 1.14.14.47 C Belongs to the NOS family. Bacterial NOS oxygenase subfamily
PAJPMEEK_00778 2.2e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PAJPMEEK_00779 4.4e-123 yflK S protein conserved in bacteria
PAJPMEEK_00780 1.5e-14 yflJ S Protein of unknown function (DUF2639)
PAJPMEEK_00781 9.1e-19 yflI
PAJPMEEK_00782 3.1e-50 yflH S Protein of unknown function (DUF3243)
PAJPMEEK_00783 3.2e-138 map 3.4.11.18 E Methionine aminopeptidase
PAJPMEEK_00784 1.3e-246 nagE 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G COG1263 Phosphotransferase system IIC components, glucose maltose N-acetylglucosamine-specific
PAJPMEEK_00785 2.2e-73 yfmQ S Uncharacterised protein from bacillus cereus group
PAJPMEEK_00786 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
PAJPMEEK_00787 5e-63 yhdN S Domain of unknown function (DUF1992)
PAJPMEEK_00788 1.2e-79 cotP O Belongs to the small heat shock protein (HSP20) family
PAJPMEEK_00789 3.6e-38 ydgA S Spore germination protein gerPA/gerPF
PAJPMEEK_00790 1.2e-39 ydgB S Spore germination protein gerPA/gerPF
PAJPMEEK_00791 4.3e-240 treP 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PAJPMEEK_00792 0.0 treC 3.2.1.93 GH13 G COG0366 Glycosidases
PAJPMEEK_00793 9e-130 treR K transcriptional
PAJPMEEK_00794 1.2e-123 yfkO C nitroreductase
PAJPMEEK_00795 4.2e-125 yibF S YibE/F-like protein
PAJPMEEK_00796 2.2e-202 yibE S YibE/F-like protein
PAJPMEEK_00798 0.0 cpdB 3.1.3.5, 3.1.3.6, 3.1.4.16 F COG0737 5'-nucleotidase 2',3'-cyclic phosphodiesterase and related esterases
PAJPMEEK_00799 1.6e-91 yfkM 1.11.1.6, 3.5.1.124 S protease
PAJPMEEK_00800 3e-187 K helix_turn _helix lactose operon repressor
PAJPMEEK_00801 1.1e-164 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PAJPMEEK_00802 4.8e-137 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PAJPMEEK_00803 1.3e-192 ydiM EGP Major facilitator Superfamily
PAJPMEEK_00804 2.7e-29 yfkK S Belongs to the UPF0435 family
PAJPMEEK_00805 1.4e-86 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PAJPMEEK_00806 8.5e-51 yfkI S gas vesicle protein
PAJPMEEK_00807 6.8e-145 yihY S Belongs to the UPF0761 family
PAJPMEEK_00809 1.5e-219 ycaD EGP COG0477 Permeases of the major facilitator superfamily
PAJPMEEK_00810 1.3e-185 cax P COG0387 Ca2 H antiporter
PAJPMEEK_00811 2.5e-144 yfkD S YfkD-like protein
PAJPMEEK_00812 7.3e-147 yfkC M Mechanosensitive ion channel
PAJPMEEK_00813 3e-220 yfkA S YfkB-like domain
PAJPMEEK_00814 4.9e-27 yfjT
PAJPMEEK_00815 9e-155 pdaA G deacetylase
PAJPMEEK_00816 2.9e-151 yfjR 1.1.1.31 I NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
PAJPMEEK_00817 2.1e-32
PAJPMEEK_00818 3.8e-184 corA P Mediates influx of magnesium ions
PAJPMEEK_00819 2e-163 yfjP 3.2.2.21 L COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
PAJPMEEK_00820 1.3e-268 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PAJPMEEK_00821 2.7e-193 yfjN J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PAJPMEEK_00822 3e-95 yfjM S Psort location Cytoplasmic, score
PAJPMEEK_00823 2.9e-190 acoA C COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PAJPMEEK_00824 3.6e-188 acoB C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PAJPMEEK_00825 6.8e-215 acoC 2.3.1.12, 2.3.1.61 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PAJPMEEK_00826 2.1e-255 acoL 1.8.1.4 C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PAJPMEEK_00827 0.0 acoR KQ COG3284 Transcriptional activator of acetoin glycerol metabolism
PAJPMEEK_00828 4.2e-15 sspH S Belongs to the SspH family
PAJPMEEK_00829 3.4e-263 aglB 3.2.1.122, 3.2.1.22, 3.2.1.86 GH4,GT4 G COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
PAJPMEEK_00830 2.1e-137 glvR F Helix-turn-helix domain, rpiR family
PAJPMEEK_00831 1e-295 glvC 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PAJPMEEK_00832 0.0 M Peptidase_G2, IMC autoproteolytic cleavage domain
PAJPMEEK_00833 0.0 yfiB3 V ABC transporter
PAJPMEEK_00834 0.0 yfiC V COG1132 ABC-type multidrug transport system, ATPase and permease components
PAJPMEEK_00835 2.4e-63 mhqP S DoxX
PAJPMEEK_00836 2.6e-160 yfiE 1.13.11.2 S glyoxalase
PAJPMEEK_00837 3.8e-168 cyoE 2.5.1.141 O Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
PAJPMEEK_00838 1.7e-96 padR K transcriptional
PAJPMEEK_00839 1.9e-112 1.6.5.2 S NADPH-dependent FMN reductase
PAJPMEEK_00840 1.7e-183 yfiQ G COG3936 Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
PAJPMEEK_00841 0.0 2.7.9.2 GT phosphoenolpyruvate synthase
PAJPMEEK_00842 1.5e-45 yrdF K ribonuclease inhibitor
PAJPMEEK_00843 3.1e-98 yfiT S Belongs to the metal hydrolase YfiT family
PAJPMEEK_00844 1.6e-291 yfiU EGP Major facilitator Superfamily
PAJPMEEK_00845 5.6e-83 yfiV K transcriptional
PAJPMEEK_00846 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PAJPMEEK_00847 5.1e-167 yfhB 5.3.3.17 S PhzF family
PAJPMEEK_00848 3.3e-106 yfhC C nitroreductase
PAJPMEEK_00849 2.1e-25 yfhD S YfhD-like protein
PAJPMEEK_00851 5.6e-169 yfhF S nucleoside-diphosphate sugar epimerase
PAJPMEEK_00852 1.1e-141 recX 2.4.1.337 GT4 S Modulates RecA activity
PAJPMEEK_00853 8.8e-53 yfhH S Protein of unknown function (DUF1811)
PAJPMEEK_00854 1.5e-206 yfhI EGP Major facilitator Superfamily
PAJPMEEK_00856 4.8e-168 mpr 3.4.21.19 M Belongs to the peptidase S1B family
PAJPMEEK_00857 2.2e-44 yfhJ S WVELL protein
PAJPMEEK_00858 1.6e-94 batE T Bacterial SH3 domain homologues
PAJPMEEK_00859 9.7e-34 yfhL S SdpI/YhfL protein family
PAJPMEEK_00860 1.5e-171 yfhM S Alpha/beta hydrolase family
PAJPMEEK_00861 4.6e-185 csbB GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
PAJPMEEK_00862 0.0 yfhO S Bacterial membrane protein YfhO
PAJPMEEK_00863 1e-184 yfhP S membrane-bound metal-dependent
PAJPMEEK_00864 1.4e-209 mutY L A G-specific
PAJPMEEK_00865 8.2e-37 yfhS
PAJPMEEK_00866 5.8e-135 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PAJPMEEK_00868 1.5e-37 ygaB S YgaB-like protein
PAJPMEEK_00869 2.2e-104 ygaC J Belongs to the UPF0374 family
PAJPMEEK_00870 2.5e-306 ygaD V ABC transporter
PAJPMEEK_00871 3.2e-179 ygaE S Membrane
PAJPMEEK_00872 6.2e-246 gsaB 5.4.3.8 H Glutamate-1-semialdehyde aminotransferase
PAJPMEEK_00873 3.1e-86 bcp 1.11.1.15 O Peroxiredoxin
PAJPMEEK_00874 1.8e-80 perR P Belongs to the Fur family
PAJPMEEK_00875 1.5e-56 ygzB S UPF0295 protein
PAJPMEEK_00876 6.3e-165 ygxA S Nucleotidyltransferase-like
PAJPMEEK_00877 3.4e-39 S COG NOG14552 non supervised orthologous group
PAJPMEEK_00882 7.8e-08
PAJPMEEK_00890 1.6e-08
PAJPMEEK_00894 4.4e-286 C Na+/H+ antiporter family
PAJPMEEK_00895 2.3e-133 pepE 3.4.11.2, 3.4.13.21 E Belongs to the peptidase S51 family
PAJPMEEK_00896 0.0 thiC 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PAJPMEEK_00897 5.4e-265 ygaK C Berberine and berberine like
PAJPMEEK_00899 1.6e-228 oppA5 E PFAM extracellular solute-binding protein family 5
PAJPMEEK_00900 2.4e-138 appB P Binding-protein-dependent transport system inner membrane component
PAJPMEEK_00901 2.4e-127 appC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PAJPMEEK_00902 5.4e-133 oppD3 P Belongs to the ABC transporter superfamily
PAJPMEEK_00903 4e-133 oppF3 E Belongs to the ABC transporter superfamily
PAJPMEEK_00904 2.1e-290 katA 1.11.1.6 P serves to protect cells from the toxic effects of hydrogen peroxide
PAJPMEEK_00905 2e-185 S Amidohydrolase
PAJPMEEK_00906 2.7e-140 ssuB P COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component
PAJPMEEK_00907 2e-180 ssuA M Sulfonate ABC transporter
PAJPMEEK_00908 6.1e-146 ssuC P ABC transporter (permease)
PAJPMEEK_00909 1.2e-213 ssuD 1.14.14.5 C Catalyzes the desulfonation of aliphatic sulfonates
PAJPMEEK_00910 2.7e-42 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PAJPMEEK_00911 2.5e-80 ygaO
PAJPMEEK_00912 4.8e-23 K Transcriptional regulator
PAJPMEEK_00914 7.4e-112 yhzB S B3/4 domain
PAJPMEEK_00915 8.4e-226 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PAJPMEEK_00916 1.4e-175 yhbB S Putative amidase domain
PAJPMEEK_00917 2e-85 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PAJPMEEK_00918 1e-108 yhbD K Protein of unknown function (DUF4004)
PAJPMEEK_00919 8.6e-64 yhbE M COG1664 Integral membrane protein CcmA involved in cell shape determination
PAJPMEEK_00920 1.3e-64 yhbF M COG1664 Integral membrane protein CcmA involved in cell shape determination
PAJPMEEK_00922 0.0 prkA T Ser protein kinase
PAJPMEEK_00923 1.2e-216 yhbH S Belongs to the UPF0229 family
PAJPMEEK_00924 4.6e-74 yhbI K DNA-binding transcription factor activity
PAJPMEEK_00925 8.1e-98 yhbJ V COG1566 Multidrug resistance efflux pump
PAJPMEEK_00926 6.4e-285 yhcA EGP Major facilitator Superfamily
PAJPMEEK_00927 4.7e-99 yhcB 1.6.5.2 S NADPH-dependent FMN reductase
PAJPMEEK_00928 3.8e-55 yhcC
PAJPMEEK_00929 9.6e-53
PAJPMEEK_00930 7.3e-62 yhcF K Transcriptional regulator
PAJPMEEK_00931 5.1e-125 yhcG V ABC transporter, ATP-binding protein
PAJPMEEK_00932 4.1e-167 yhcH V ABC transporter, ATP-binding protein
PAJPMEEK_00933 1.7e-163 yhcI S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PAJPMEEK_00934 3.9e-30 cspB K 'Cold-shock' DNA-binding domain
PAJPMEEK_00935 3e-89 metQ M Belongs to the nlpA lipoprotein family
PAJPMEEK_00936 3.8e-196 yhcK 2.7.7.65 T COG2199 FOG GGDEF domain
PAJPMEEK_00937 3.2e-221 ydjN U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PAJPMEEK_00938 1.5e-46 yhcM
PAJPMEEK_00939 5.7e-84 yhcN S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PAJPMEEK_00940 3.3e-161 yhcP
PAJPMEEK_00941 1.5e-115 yhcQ M Spore coat protein
PAJPMEEK_00942 0.0 yhcR 3.1.3.5 F Belongs to the 5'-nucleotidase family
PAJPMEEK_00943 1.6e-108 yhcS 3.4.22.70 M COG3764 Sortase (surface protein transpeptidase)
PAJPMEEK_00944 1.1e-169 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PAJPMEEK_00945 6.4e-69 yhcU S Family of unknown function (DUF5365)
PAJPMEEK_00946 2.6e-68 yhcV S COG0517 FOG CBS domain
PAJPMEEK_00947 4.9e-125 yhcW 5.4.2.6 S hydrolase
PAJPMEEK_00948 1.1e-302 yhcX 3.5.1.3 K Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
PAJPMEEK_00949 3.2e-261 yhxA E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PAJPMEEK_00950 1.5e-103 glpP K Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
PAJPMEEK_00951 4.5e-149 glpF G Belongs to the MIP aquaporin (TC 1.A.8) family
PAJPMEEK_00952 7e-294 glpK 2.7.1.30 C Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PAJPMEEK_00953 0.0 glpD 1.1.5.3 C Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
PAJPMEEK_00954 0.0 pmmB 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
PAJPMEEK_00955 6.7e-204 yhcY 2.7.13.3 T Histidine kinase
PAJPMEEK_00956 3.4e-112 yhcZ K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PAJPMEEK_00957 3.3e-89 azr 1.7.1.6 S NADPH-dependent FMN reductase
PAJPMEEK_00958 2.5e-39 yhdB S YhdB-like protein
PAJPMEEK_00959 5.3e-53 yhdC S Protein of unknown function (DUF3889)
PAJPMEEK_00960 1e-217 sle1 3.5.1.28 CBM50 M COG1388 FOG LysM repeat
PAJPMEEK_00961 1.9e-74 nsrR K Transcriptional regulator
PAJPMEEK_00962 1.2e-256 ygxB M Conserved TM helix
PAJPMEEK_00963 1.6e-271 ycgB S Stage V sporulation protein R
PAJPMEEK_00964 1.3e-257 phoB 3.1.3.1 P Belongs to the alkaline phosphatase family
PAJPMEEK_00965 4.8e-127 lytE 3.5.1.28 CBM50 M COG1388 FOG LysM repeat
PAJPMEEK_00966 1.5e-163 citR K Transcriptional regulator
PAJPMEEK_00967 1.1e-206 citA 2.3.3.1 C Belongs to the citrate synthase family
PAJPMEEK_00968 5.4e-161 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PAJPMEEK_00969 5.3e-251 yhdG E amino acid
PAJPMEEK_00970 2e-199 yhdH S Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
PAJPMEEK_00971 8.1e-45 yhdK S Sigma-M inhibitor protein
PAJPMEEK_00972 3.3e-200 yhdL S Sigma factor regulator N-terminal
PAJPMEEK_00973 4.2e-86 sigM K Belongs to the sigma-70 factor family. ECF subfamily
PAJPMEEK_00974 5.1e-110 plsC 2.3.1.51 I Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
PAJPMEEK_00975 1.6e-241 corC1 S COG1253 Hemolysins and related proteins containing CBS domains
PAJPMEEK_00976 4.3e-71 cueR K transcriptional
PAJPMEEK_00977 5.5e-225 yhdR 2.6.1.1 E Aminotransferase
PAJPMEEK_00978 1.5e-236 pksF 2.3.1.179, 2.3.1.41 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PAJPMEEK_00979 1.9e-256 corC1 P COG1253 Hemolysins and related proteins containing CBS domains
PAJPMEEK_00980 8.5e-52 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAJPMEEK_00981 4e-63 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PAJPMEEK_00982 1.7e-128 yhdW 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PAJPMEEK_00984 1.6e-205 yhdY M Mechanosensitive ion channel
PAJPMEEK_00985 1.9e-138 cobB K NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form
PAJPMEEK_00986 9.3e-158 yheN G deacetylase
PAJPMEEK_00987 1.8e-153 dat 2.6.1.21 E Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in the first half-reaction
PAJPMEEK_00988 4.6e-88 pksA K Transcriptional regulator
PAJPMEEK_00989 1.2e-94 ymcC S Membrane
PAJPMEEK_00990 2.1e-85 T universal stress protein
PAJPMEEK_00992 0.0 yheI V COG1132 ABC-type multidrug transport system, ATPase and permease components
PAJPMEEK_00993 0.0 yheH V COG1132 ABC-type multidrug transport system, ATPase and permease components
PAJPMEEK_00994 2.5e-112 yheG GM NAD(P)H-binding
PAJPMEEK_00996 5.8e-29 sspB S spore protein
PAJPMEEK_00997 1.7e-36 yheE S Family of unknown function (DUF5342)
PAJPMEEK_00998 2.5e-261 gshB 6.3.2.2, 6.3.2.3 HJ YheC/D like ATP-grasp
PAJPMEEK_00999 3.1e-214 yheC HJ YheC/D like ATP-grasp
PAJPMEEK_01000 9.4e-206 yheB S Belongs to the UPF0754 family
PAJPMEEK_01001 4.4e-53 yheA S Belongs to the UPF0342 family
PAJPMEEK_01002 5.2e-204 yhaZ L DNA alkylation repair enzyme
PAJPMEEK_01003 4.7e-157 yhaX S haloacid dehalogenase-like hydrolase
PAJPMEEK_01004 4.6e-293 hemZ H coproporphyrinogen III oxidase
PAJPMEEK_01005 2.7e-249 iucD 1.14.13.59 Q L-lysine 6-monooxygenase (NADPH-requiring)
PAJPMEEK_01006 8.2e-208 yhaU P COG0475 Kef-type K transport systems, membrane components
PAJPMEEK_01007 7.8e-88 yhaT P regulatory, ligand-binding protein related to C-terminal domains of K channels
PAJPMEEK_01009 9e-136 yhaR 5.3.3.18 I enoyl-CoA hydratase
PAJPMEEK_01010 7.3e-15 S YhzD-like protein
PAJPMEEK_01011 3e-167 yhaQ S ABC transporter, ATP-binding protein
PAJPMEEK_01012 4.2e-207 yhaP CP COG1668 ABC-type Na efflux pump, permease component
PAJPMEEK_01013 1.2e-235 yhaO L DNA repair exonuclease
PAJPMEEK_01014 0.0 yhaN L AAA domain
PAJPMEEK_01015 2.6e-177 yhaM L Shows a 3'-5' exoribonuclease activity
PAJPMEEK_01016 1.6e-32 yhaL S Sporulation protein YhaL
PAJPMEEK_01017 1.7e-122 prsA 5.2.1.8 M plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PAJPMEEK_01018 7e-95 yhaK S Putative zincin peptidase
PAJPMEEK_01019 9.9e-55 yhaI S Protein of unknown function (DUF1878)
PAJPMEEK_01020 8.6e-113 hpr K Negative regulator of protease production and sporulation
PAJPMEEK_01021 6.2e-39 yhaH S YtxH-like protein
PAJPMEEK_01022 2e-17
PAJPMEEK_01023 2.9e-77 trpP S Tryptophan transporter TrpP
PAJPMEEK_01024 1.9e-203 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PAJPMEEK_01025 4.4e-79 hit FG COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
PAJPMEEK_01026 4.4e-135 ecsA V transporter (ATP-binding protein)
PAJPMEEK_01027 8.5e-221 ecsB U ABC transporter
PAJPMEEK_01028 3.6e-123 ecsC S EcsC protein family
PAJPMEEK_01029 2.5e-225 yhaA 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
PAJPMEEK_01030 1.4e-243 yhfA C membrane
PAJPMEEK_01031 8.4e-90 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
PAJPMEEK_01032 0.0 pbpF 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PAJPMEEK_01033 8.6e-204 hemE 4.1.1.37 H Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
PAJPMEEK_01034 7.3e-180 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
PAJPMEEK_01035 1.4e-275 hemG 1.14.19.9, 1.3.3.15, 1.3.3.4 H Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
PAJPMEEK_01036 3.2e-101 yhgD K Transcriptional regulator
PAJPMEEK_01037 3.2e-277 yhgE S YhgE Pip N-terminal domain protein
PAJPMEEK_01038 3.3e-183 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PAJPMEEK_01040 5.1e-198 yhfE 3.2.1.4 GH5,GH9 G peptidase M42
PAJPMEEK_01041 7.4e-223 gltP C Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PAJPMEEK_01042 7.9e-11 yhfH S YhfH-like protein
PAJPMEEK_01043 7.6e-140 yhfI S COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III
PAJPMEEK_01044 2.9e-187 lplJ 6.3.1.20 H Lipoate-protein ligase
PAJPMEEK_01045 2.6e-112 yhfK GM NmrA-like family
PAJPMEEK_01046 6.8e-300 fadD 6.2.1.3 IQ AMP-binding enzyme C-terminal domain
PAJPMEEK_01047 8.7e-66 yhfM
PAJPMEEK_01048 6e-238 yhfN 3.4.24.84 O Peptidase M48
PAJPMEEK_01049 4.3e-206 aprE 3.4.21.62 O Belongs to the peptidase S8 family
PAJPMEEK_01050 1.3e-154 yhfQ P COG4594 ABC-type Fe3 -citrate transport system, periplasmic component
PAJPMEEK_01051 1.7e-102 yhfR 3.1.3.73 G Belongs to the phosphoglycerate mutase family
PAJPMEEK_01052 5.5e-203 vraB 2.3.1.9 I Belongs to the thiolase family
PAJPMEEK_01053 7.3e-280 yhfT 6.2.1.3 IQ AMP-binding enzyme C-terminal domain
PAJPMEEK_01054 2.1e-89 bioY S BioY family
PAJPMEEK_01055 9.1e-197 hemAT NT chemotaxis protein
PAJPMEEK_01056 1.1e-297 yhfW CE COG0665 Glycine D-amino acid oxidases (deaminating)
PAJPMEEK_01057 8.5e-159 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PAJPMEEK_01058 1.4e-31 yhzC S IDEAL
PAJPMEEK_01059 1.9e-109 comK K Competence transcription factor
PAJPMEEK_01061 1e-73
PAJPMEEK_01062 3.9e-68 frataxin S Domain of unknown function (DU1801)
PAJPMEEK_01063 7.4e-67 frataxin S Domain of unknown function (DU1801)
PAJPMEEK_01064 1.4e-92 mepB S MepB protein
PAJPMEEK_01065 1.9e-127 yrpD S Domain of unknown function, YrpD
PAJPMEEK_01066 4.6e-42 yhjA S Excalibur calcium-binding domain
PAJPMEEK_01067 3.3e-47 S Belongs to the UPF0145 family
PAJPMEEK_01068 8.6e-268 yhjB E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PAJPMEEK_01069 1.4e-27 yhjC S Protein of unknown function (DUF3311)
PAJPMEEK_01070 1.7e-60 yhjD
PAJPMEEK_01071 2e-109 yhjE S SNARE associated Golgi protein
PAJPMEEK_01072 9.2e-92 sipV 3.4.21.89 U Belongs to the peptidase S26 family
PAJPMEEK_01073 3.2e-278 yhjG CH FAD binding domain
PAJPMEEK_01074 5.8e-94 yhjH K helix_turn_helix multiple antibiotic resistance protein
PAJPMEEK_01075 6.7e-183 abrB S membrane
PAJPMEEK_01076 1.1e-209 blt EGP Major facilitator Superfamily
PAJPMEEK_01077 4.5e-109 K QacR-like protein, C-terminal region
PAJPMEEK_01078 1.4e-92 yhjR S Rubrerythrin
PAJPMEEK_01079 3e-125 ydfS S Protein of unknown function (DUF421)
PAJPMEEK_01080 0.0 addB 3.1.21.3, 3.6.4.12 L ATP-dependent helicase deoxyribonuclease subunit B
PAJPMEEK_01081 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PAJPMEEK_01082 8.7e-223 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PAJPMEEK_01083 0.0 sbcC L COG0419 ATPase involved in DNA repair
PAJPMEEK_01084 1.3e-50 yisB V COG1403 Restriction endonuclease
PAJPMEEK_01085 5.9e-32 gerPF S Spore germination protein gerPA/gerPF
PAJPMEEK_01086 1.9e-65 gerPE S Spore germination protein GerPE
PAJPMEEK_01087 3.1e-23 gerPD S Spore germination protein
PAJPMEEK_01088 1.4e-62 gerPC S Spore germination protein
PAJPMEEK_01089 6.2e-35 gerPB S cell differentiation
PAJPMEEK_01090 8.4e-34 gerPA S Spore germination protein
PAJPMEEK_01091 5e-07 yisI S Spo0E like sporulation regulatory protein
PAJPMEEK_01092 2.1e-171 yisK Q COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
PAJPMEEK_01093 1.1e-59 yisL S UPF0344 protein
PAJPMEEK_01094 5.3e-98 yisN S Protein of unknown function (DUF2777)
PAJPMEEK_01095 0.0 asnO 6.3.5.4 E Asparagine synthase
PAJPMEEK_01096 1.3e-134 crtB 2.5.1.21, 2.5.1.32, 2.5.1.99 I phytoene
PAJPMEEK_01097 1.5e-245 yisQ V Mate efflux family protein
PAJPMEEK_01098 4.5e-160 yisR K Transcriptional regulator
PAJPMEEK_01099 3.7e-90 yisT S DinB family
PAJPMEEK_01100 3.5e-74 argO S Lysine exporter protein LysE YggA
PAJPMEEK_01101 4.9e-191 yisV K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PAJPMEEK_01102 3.7e-71 mcbG S Pentapeptide repeats (9 copies)
PAJPMEEK_01103 1.1e-80 yjcF S Acetyltransferase (GNAT) domain
PAJPMEEK_01104 0.0 yitJ 1.5.1.20, 2.1.1.10, 2.1.1.13 E Catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
PAJPMEEK_01105 6.6e-55 yajQ S Belongs to the UPF0234 family
PAJPMEEK_01106 9e-161 cvfB S protein conserved in bacteria
PAJPMEEK_01107 1.1e-173 yufN S ABC transporter substrate-binding protein PnrA-like
PAJPMEEK_01108 3.4e-233 yvaQ NT Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PAJPMEEK_01109 8.7e-245 cypC 1.11.2.4, 1.14.14.1 Q Cytochrome P450
PAJPMEEK_01111 2.5e-158 yitS S protein conserved in bacteria
PAJPMEEK_01112 3.9e-148 yitT S Uncharacterized protein conserved in bacteria (DUF2179)
PAJPMEEK_01113 2.9e-81 ipi S Intracellular proteinase inhibitor
PAJPMEEK_01114 4.4e-26 S Protein of unknown function (DUF3813)
PAJPMEEK_01115 3.5e-07
PAJPMEEK_01116 2.7e-154 yitU 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
PAJPMEEK_01117 2.4e-144 yjfP S COG1073 Hydrolases of the alpha beta superfamily
PAJPMEEK_01118 4.7e-51 yitW S metal-sulfur cluster biosynthetic enzyme
PAJPMEEK_01119 4.8e-81 fosB 2.5.1.18 H Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor
PAJPMEEK_01120 1.1e-272 yitY C D-arabinono-1,4-lactone oxidase
PAJPMEEK_01121 4.1e-90 norB G Major Facilitator Superfamily
PAJPMEEK_01122 3.6e-196 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PAJPMEEK_01123 1.6e-227 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PAJPMEEK_01124 2.2e-137 argB 2.7.2.8 F Belongs to the acetylglutamate kinase family. ArgB subfamily
PAJPMEEK_01125 8.9e-220 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
PAJPMEEK_01126 5.3e-203 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PAJPMEEK_01127 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase ammonia chain
PAJPMEEK_01128 1.2e-177 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PAJPMEEK_01129 1.2e-27 yjzC S YjzC-like protein
PAJPMEEK_01130 1.5e-23 yjzD S Protein of unknown function (DUF2929)
PAJPMEEK_01131 1.1e-138 yjaU I carboxylic ester hydrolase activity
PAJPMEEK_01132 1.5e-106 yjaV
PAJPMEEK_01133 7.2e-166 med S Transcriptional activator protein med
PAJPMEEK_01134 1.1e-26 comZ S ComZ
PAJPMEEK_01135 5.9e-32 yjzB
PAJPMEEK_01136 1.1e-172 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PAJPMEEK_01137 8.9e-234 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PAJPMEEK_01138 5.6e-149 yjaZ O Zn-dependent protease
PAJPMEEK_01139 3.3e-183 appD P Belongs to the ABC transporter superfamily
PAJPMEEK_01140 5.9e-188 appF E Belongs to the ABC transporter superfamily
PAJPMEEK_01141 0.0 appA E COG0747 ABC-type dipeptide transport system, periplasmic component
PAJPMEEK_01142 2.2e-171 oppB P COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PAJPMEEK_01143 1e-162 appC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PAJPMEEK_01144 5.5e-146 yjbA S Belongs to the UPF0736 family
PAJPMEEK_01145 5.2e-184 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
PAJPMEEK_01146 0.0 oppA E ABC transporter substrate-binding protein
PAJPMEEK_01147 4.6e-166 oppB P COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PAJPMEEK_01148 1.3e-165 oppC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PAJPMEEK_01149 2.7e-202 oppD P Belongs to the ABC transporter superfamily
PAJPMEEK_01150 2.5e-172 oppF E Belongs to the ABC transporter superfamily
PAJPMEEK_01151 7.5e-230 S Putative glycosyl hydrolase domain
PAJPMEEK_01152 2e-103 yjbC K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PAJPMEEK_01153 1.6e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PAJPMEEK_01154 3.6e-109 yjbE P Integral membrane protein TerC family
PAJPMEEK_01155 2e-116 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
PAJPMEEK_01156 6.2e-221 yjbF S Competence protein
PAJPMEEK_01157 0.0 pepF E oligoendopeptidase F
PAJPMEEK_01158 5.8e-19
PAJPMEEK_01159 2.3e-170 yjbH Q dithiol-disulfide isomerase involved in polyketide biosynthesis
PAJPMEEK_01160 4.8e-72 yjbI S Bacterial-like globin
PAJPMEEK_01161 4.5e-118 yjbJ M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
PAJPMEEK_01162 4.1e-101 yjbK S protein conserved in bacteria
PAJPMEEK_01163 6e-61 yjbL S Belongs to the UPF0738 family
PAJPMEEK_01164 2.3e-108 yjbM 2.7.6.5 S GTP pyrophosphokinase
PAJPMEEK_01165 2.1e-151 nadK 2.7.1.23 G Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PAJPMEEK_01166 1.3e-162 yjbO 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PAJPMEEK_01167 1.4e-144 prpE 3.1.3.16, 3.6.1.41 T Asymmetrically hydrolyzes Ap4p to yield AMP and ATP
PAJPMEEK_01168 0.0 yjbQ P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PAJPMEEK_01169 5.2e-138 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PAJPMEEK_01170 4.6e-106 tenI 2.5.1.3, 5.3.99.10 H Transcriptional regulator TenI
PAJPMEEK_01171 1.9e-211 thiO 1.4.3.19 E Glycine oxidase
PAJPMEEK_01172 1.4e-30 thiS H Thiamine biosynthesis
PAJPMEEK_01173 7.6e-135 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PAJPMEEK_01174 9.9e-191 thiF 2.7.7.73, 2.7.7.80 H COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
PAJPMEEK_01175 9.9e-149 thiD 2.5.1.3, 2.7.1.35, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PAJPMEEK_01176 1.4e-139 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
PAJPMEEK_01177 5e-89 yjbX S Spore coat protein
PAJPMEEK_01178 2e-82 cotZ S Spore coat protein
PAJPMEEK_01179 4.6e-93 cotY S Spore coat protein Z
PAJPMEEK_01180 1.5e-70 cotX S Spore Coat Protein X and V domain
PAJPMEEK_01181 6.8e-21 cotW
PAJPMEEK_01182 1.4e-52 cotV S Spore Coat Protein X and V domain
PAJPMEEK_01183 2.1e-55 yjcA S Protein of unknown function (DUF1360)
PAJPMEEK_01187 3.8e-38 spoVIF S Stage VI sporulation protein F
PAJPMEEK_01188 0.0 yjcD 3.6.4.12 L DNA helicase
PAJPMEEK_01189 2.1e-36
PAJPMEEK_01190 5.7e-143 blm 3.5.2.6 S Belongs to the metallo-beta-lactamase superfamily. Class-B beta-lactamase family
PAJPMEEK_01191 3e-125 S ABC-2 type transporter
PAJPMEEK_01192 1.7e-63 nodI V AAA domain, putative AbiEii toxin, Type IV TA system
PAJPMEEK_01193 6.5e-57 nodI V AAA domain, putative AbiEii toxin, Type IV TA system
PAJPMEEK_01194 9.4e-36 K SpoVT / AbrB like domain
PAJPMEEK_01196 5e-75 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PAJPMEEK_01197 1.1e-92 yjcG J Belongs to the 2H phosphoesterase superfamily. YjcG family
PAJPMEEK_01198 7.2e-127 yjcH P COG2382 Enterochelin esterase and related enzymes
PAJPMEEK_01199 1.2e-213 metB 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PAJPMEEK_01200 7.7e-219 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PAJPMEEK_01202 2.1e-174 L Belongs to the 'phage' integrase family
PAJPMEEK_01203 4.4e-49 xkdA E IrrE N-terminal-like domain
PAJPMEEK_01204 5.4e-42
PAJPMEEK_01205 4.7e-25 S Short C-terminal domain
PAJPMEEK_01206 1.1e-15 K Cro/C1-type HTH DNA-binding domain
PAJPMEEK_01207 6.3e-15 ropB K sequence-specific DNA binding
PAJPMEEK_01208 3.4e-15 S Helix-turn-helix domain
PAJPMEEK_01209 4.6e-84
PAJPMEEK_01211 4.7e-07 S Hypothetical protein Yqai
PAJPMEEK_01213 9.6e-100
PAJPMEEK_01214 9.3e-67 pi112 3.6.4.12 L PDDEXK-like domain of unknown function (DUF3799)
PAJPMEEK_01216 4e-74 3.1.3.16 L DnaD domain protein
PAJPMEEK_01217 7.2e-122 xkdC L IstB-like ATP binding protein
PAJPMEEK_01219 3.8e-59 rusA L Endodeoxyribonuclease RusA
PAJPMEEK_01221 5e-17 yqaO S Phage-like element PBSX protein XtrA
PAJPMEEK_01223 3.2e-14
PAJPMEEK_01225 1.2e-100 ydiP 2.1.1.37 H Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
PAJPMEEK_01226 3.3e-47 V HNH nucleases
PAJPMEEK_01227 3.4e-29 L HNH endonuclease
PAJPMEEK_01229 6e-67 xpf K COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
PAJPMEEK_01230 6e-13 K Transcriptional regulator
PAJPMEEK_01232 5.2e-17 K Transcriptional regulator
PAJPMEEK_01234 1.5e-82 yqaS L DNA packaging
PAJPMEEK_01235 1.4e-183 ps334 S Terminase-like family
PAJPMEEK_01236 8.9e-198 S Phage portal protein, SPP1 Gp6-like
PAJPMEEK_01237 4.3e-92 S Phage Mu protein F like protein
PAJPMEEK_01238 6.4e-57 S Domain of unknown function (DUF4355)
PAJPMEEK_01239 4.8e-144 S Phage capsid family
PAJPMEEK_01242 4.3e-36 S Phage gp6-like head-tail connector protein
PAJPMEEK_01243 2.8e-28 S Phage head-tail joining protein
PAJPMEEK_01244 3.6e-38 S Bacteriophage HK97-gp10, putative tail-component
PAJPMEEK_01245 1e-29 S Protein of unknown function (DUF3168)
PAJPMEEK_01246 1.5e-33 N Bacterial Ig-like domain 2
PAJPMEEK_01247 9.4e-09 chiA 3.2.1.14 GH18 G Belongs to the glycosyl hydrolase 18 family
PAJPMEEK_01248 2.5e-25 S Phage tail assembly chaperone protein, TAC
PAJPMEEK_01249 3.2e-127
PAJPMEEK_01250 4.6e-47
PAJPMEEK_01251 3.1e-146 sidC L Phage minor structural protein
PAJPMEEK_01255 9e-61 S Pfam:Phage_holin_4_1
PAJPMEEK_01256 3.1e-117 xlyA 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
PAJPMEEK_01257 2e-16
PAJPMEEK_01258 1.4e-39
PAJPMEEK_01259 2.2e-30 S SMI1-KNR4 cell-wall
PAJPMEEK_01260 3e-198 M nucleic acid phosphodiester bond hydrolysis
PAJPMEEK_01262 7.6e-10 K PFAM helix-turn-helix domain protein
PAJPMEEK_01263 3.4e-34 E Pfam:DUF955
PAJPMEEK_01264 4.5e-12
PAJPMEEK_01265 1.1e-31 L Belongs to the 'phage' integrase family
PAJPMEEK_01266 8.7e-31
PAJPMEEK_01267 1.7e-85
PAJPMEEK_01268 1.3e-216 yobL S Bacterial EndoU nuclease
PAJPMEEK_01270 3.5e-59 E Glyoxalase-like domain
PAJPMEEK_01271 1.2e-163 bla 3.5.2.6 V beta-lactamase
PAJPMEEK_01272 8.4e-47 yjcS S Antibiotic biosynthesis monooxygenase
PAJPMEEK_01273 2.4e-251 yfjF EGP Belongs to the major facilitator superfamily
PAJPMEEK_01274 1.4e-81 napB K helix_turn_helix multiple antibiotic resistance protein
PAJPMEEK_01275 3.8e-220 ganA 3.2.1.89 G arabinogalactan
PAJPMEEK_01276 7.3e-291 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PAJPMEEK_01277 2.7e-188 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PAJPMEEK_01278 6.5e-218 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PAJPMEEK_01279 0.0 lacE 2.7.1.196, 2.7.1.205, 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAJPMEEK_01280 9.1e-50 lacF 2.7.1.207 G phosphotransferase system
PAJPMEEK_01281 1.4e-283 lacG 3.2.1.85 G Belongs to the glycosyl hydrolase 1 family
PAJPMEEK_01282 5.1e-139 lacR K COG1349 Transcriptional regulators of sugar metabolism
PAJPMEEK_01283 1.6e-123 5.4.2.6 S Haloacid dehalogenase-like hydrolase
PAJPMEEK_01284 1.3e-144 N Kelch motif
PAJPMEEK_01286 8.1e-106 yhiD S MgtC SapB transporter
PAJPMEEK_01288 7.5e-22 yjfB S Putative motility protein
PAJPMEEK_01289 2.6e-70 T PhoQ Sensor
PAJPMEEK_01290 1.7e-102 yjgB S Domain of unknown function (DUF4309)
PAJPMEEK_01291 0.0 yjgC 1.17.1.10, 1.17.1.9 C formate dehydrogenase, alpha subunit
PAJPMEEK_01292 9.7e-92 yjgD S Protein of unknown function (DUF1641)
PAJPMEEK_01293 2.7e-227 yjiB 1.14.13.154, 1.14.15.8 C Cytochrome P450
PAJPMEEK_01294 3.6e-224 oleD GT1 CG COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
PAJPMEEK_01295 6.8e-29
PAJPMEEK_01296 3.9e-145 hemD 2.1.1.107, 4.2.1.75 H Uroporphyrinogen-III synthase
PAJPMEEK_01297 4.6e-124 ybbM S transport system, permease component
PAJPMEEK_01298 5.3e-133 pstB 3.6.3.27 P Belongs to the ABC transporter superfamily
PAJPMEEK_01299 2.7e-177 yjlA EG Putative multidrug resistance efflux transporter
PAJPMEEK_01300 8.9e-92 yjlB S Cupin domain
PAJPMEEK_01301 7e-66 yjlC S Protein of unknown function (DUF1641)
PAJPMEEK_01302 3.5e-219 yjlD 1.6.99.3 C NADH dehydrogenase
PAJPMEEK_01303 5.6e-277 uxaC 5.3.1.12 G glucuronate isomerase
PAJPMEEK_01304 2.5e-253 yjmB G symporter YjmB
PAJPMEEK_01305 1.3e-182 exuR K transcriptional
PAJPMEEK_01306 5.6e-280 uxaB 1.1.1.17, 1.1.1.58 G tagaturonate reductase activity
PAJPMEEK_01307 1.4e-286 uxaA 4.2.1.7, 4.4.1.24 G Altronate
PAJPMEEK_01308 1e-87 T Transcriptional regulatory protein, C terminal
PAJPMEEK_01309 2e-130 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PAJPMEEK_01310 2.1e-15 V ABC transporter, ATP-binding protein
PAJPMEEK_01312 3.6e-134 L Molecular Function DNA binding, Biological Process DNA recombination
PAJPMEEK_01313 4.2e-53 L COG2963 Transposase and inactivated derivatives
PAJPMEEK_01314 8.7e-131 MA20_18170 S membrane transporter protein
PAJPMEEK_01315 2.1e-79 yjoA S DinB family
PAJPMEEK_01316 4.9e-215 S response regulator aspartate phosphatase
PAJPMEEK_01318 5e-168 xlyA 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
PAJPMEEK_01319 4.7e-61 yjqA S Bacterial PH domain
PAJPMEEK_01320 3.6e-111 yjqB S phage-related replication protein
PAJPMEEK_01321 7.8e-111 xkdA E IrrE N-terminal-like domain
PAJPMEEK_01322 1.1e-56 xre K Helix-turn-helix XRE-family like proteins
PAJPMEEK_01324 2.5e-152 xkdC L Bacterial dnaA protein
PAJPMEEK_01327 1.2e-10 yqaO S Phage-like element PBSX protein XtrA
PAJPMEEK_01328 4.9e-85 xpf K COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
PAJPMEEK_01329 1.2e-109 xtmA L phage terminase small subunit
PAJPMEEK_01330 1e-208 xtmB S phage terminase, large subunit
PAJPMEEK_01331 7.9e-242 yqbA S portal protein
PAJPMEEK_01332 1.7e-90 xkdF 2.1.1.72 L Putative phage serine protease XkdF
PAJPMEEK_01333 1e-157 xkdG S Phage capsid family
PAJPMEEK_01334 7.4e-46 yqbG S Protein of unknown function (DUF3199)
PAJPMEEK_01335 4.2e-43 yqbH S Domain of unknown function (DUF3599)
PAJPMEEK_01336 3.1e-60 xkdI S Bacteriophage HK97-gp10, putative tail-component
PAJPMEEK_01337 1.1e-56 xkdJ
PAJPMEEK_01338 3.1e-14
PAJPMEEK_01339 3.8e-225 xkdK S Phage tail sheath C-terminal domain
PAJPMEEK_01340 2e-74 xkdM S Phage tail tube protein
PAJPMEEK_01341 1.7e-73 S Phage XkdN-like tail assembly chaperone protein, TAC
PAJPMEEK_01342 3.4e-19
PAJPMEEK_01343 5.8e-186 xkdO L Transglycosylase SLT domain
PAJPMEEK_01344 6.6e-111 xkdP S Lysin motif
PAJPMEEK_01345 1.4e-160 xkdQ 3.2.1.96 G NLP P60 protein
PAJPMEEK_01346 7.2e-32 xkdR S Protein of unknown function (DUF2577)
PAJPMEEK_01347 7.2e-58 xkdS S Protein of unknown function (DUF2634)
PAJPMEEK_01348 1.3e-164 xkdT S Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
PAJPMEEK_01349 5e-86 xkdU S Uncharacterised protein conserved in bacteria (DUF2313)
PAJPMEEK_01350 1.2e-26
PAJPMEEK_01351 2.1e-187
PAJPMEEK_01353 6.5e-30 xkdX
PAJPMEEK_01354 9.6e-138 xepA
PAJPMEEK_01355 8.7e-38 xhlA S Haemolysin XhlA
PAJPMEEK_01356 1.3e-38 xhlB S SPP1 phage holin
PAJPMEEK_01357 2.7e-168 xlyA 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
PAJPMEEK_01358 8.7e-23 spoIISB S Stage II sporulation protein SB
PAJPMEEK_01359 2.4e-133 spoIISA S Toxin SpoIISA, type II toxin-antitoxin system
PAJPMEEK_01360 7.5e-175 pit P phosphate transporter
PAJPMEEK_01361 6.9e-110 ykaA P COG1392 Phosphate transport regulator (distant homolog of PhoU)
PAJPMEEK_01362 1.5e-242 steT E amino acid
PAJPMEEK_01363 5.5e-183 mhqA E COG0346 Lactoylglutathione lyase and related lyases
PAJPMEEK_01364 0.0 ykcB M COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PAJPMEEK_01365 2.9e-179 ykcC GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
PAJPMEEK_01367 3.3e-205 htrA 3.4.21.107 O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PAJPMEEK_01368 7.4e-286 yubD P Major Facilitator Superfamily
PAJPMEEK_01370 6.5e-156 dppA E D-aminopeptidase
PAJPMEEK_01371 1.4e-159 dppB P COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PAJPMEEK_01372 1.4e-175 dppC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PAJPMEEK_01373 3.5e-191 dppD P Belongs to the ABC transporter superfamily
PAJPMEEK_01374 0.0 dppE E ABC transporter substrate-binding protein
PAJPMEEK_01375 1.3e-176 ykfA 3.4.17.13 V proteins, homologs of microcin C7 resistance protein MccF
PAJPMEEK_01376 1.1e-203 ykfB 5.1.1.20 M Belongs to the mandelate racemase muconate lactonizing enzyme family
PAJPMEEK_01377 8.3e-173 ykfC 3.4.14.13 M COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
PAJPMEEK_01378 9.6e-183 ykfD E Belongs to the ABC transporter superfamily
PAJPMEEK_01379 3.9e-206 pgl 3.1.1.31 G 6-phosphogluconolactonase
PAJPMEEK_01380 2.2e-159 ykgA E Amidinotransferase
PAJPMEEK_01381 8.4e-93 ykhA 3.1.2.20 I Acyl-CoA hydrolase
PAJPMEEK_01382 7.9e-102 ykkB 2.3.1.128 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PAJPMEEK_01383 2.7e-52 ykkC P Multidrug resistance protein
PAJPMEEK_01384 3.4e-49 ykkD P Multidrug resistance protein
PAJPMEEK_01385 7.8e-171 purU 2.7.7.72, 3.5.1.10 F Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4)
PAJPMEEK_01386 3.3e-203 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PAJPMEEK_01387 9e-226 proA 1.2.1.41, 1.2.1.81 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PAJPMEEK_01388 5.7e-71 ohrA O Organic hydroperoxide resistance protein
PAJPMEEK_01389 6.1e-88 ohrR K COG1846 Transcriptional regulators
PAJPMEEK_01390 4.2e-71 ohrB O Organic hydroperoxide resistance protein
PAJPMEEK_01391 9.5e-61 D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
PAJPMEEK_01393 3.4e-216 M Glycosyl transferase family 2
PAJPMEEK_01394 4.4e-130 M PFAM Collagen triple helix repeat (20 copies)
PAJPMEEK_01395 6.5e-218 hcaT 1.5.1.2 EGP Major facilitator Superfamily
PAJPMEEK_01396 2.5e-121 yeiL T COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
PAJPMEEK_01397 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PAJPMEEK_01398 1.7e-176 isp O Belongs to the peptidase S8 family
PAJPMEEK_01399 4.1e-150 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PAJPMEEK_01400 9.3e-133 ykoC P Cobalt transport protein
PAJPMEEK_01401 2.2e-304 P ABC transporter, ATP-binding protein
PAJPMEEK_01402 2e-98 ykoE S ABC-type cobalt transport system, permease component
PAJPMEEK_01403 1.3e-245 ydhD M Glycosyl hydrolase
PAJPMEEK_01405 2.2e-238 mgtE P Acts as a magnesium transporter
PAJPMEEK_01406 5.4e-53 tnrA K transcriptional
PAJPMEEK_01407 1.9e-16
PAJPMEEK_01408 3.1e-26 ykoL
PAJPMEEK_01409 1.1e-80 ykoM K transcriptional
PAJPMEEK_01410 3.7e-99 ykoP G polysaccharide deacetylase
PAJPMEEK_01411 0.0 ligD 6.5.1.1 L ATP-dependent DNA ligase
PAJPMEEK_01412 4.2e-153 ku L With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
PAJPMEEK_01413 4.1e-101 ykoX S membrane-associated protein
PAJPMEEK_01414 6e-135 ykoY P COG0861 Membrane protein TerC, possibly involved in tellurium resistance
PAJPMEEK_01415 3.4e-127 sigI K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PAJPMEEK_01416 8.1e-120 rsgI S Anti-sigma factor N-terminus
PAJPMEEK_01417 2.5e-26 sspD S small acid-soluble spore protein
PAJPMEEK_01418 7.8e-126 ykrK S Domain of unknown function (DUF1836)
PAJPMEEK_01419 9.2e-156 htpX O Belongs to the peptidase M48B family
PAJPMEEK_01420 6.8e-134 L Molecular Function DNA binding, Biological Process DNA recombination
PAJPMEEK_01421 1.1e-40 L transposase activity
PAJPMEEK_01422 1.3e-241 ktrB P COG0168 Trk-type K transport systems, membrane components
PAJPMEEK_01423 3.8e-114 ydfR S Protein of unknown function (DUF421)
PAJPMEEK_01424 7.9e-24 ykzE
PAJPMEEK_01425 2e-191 ykrP G COG3594 Fucose 4-O-acetylase and related acetyltransferases
PAJPMEEK_01426 0.0 kinE 2.7.13.3 T Histidine kinase
PAJPMEEK_01427 3.9e-87 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PAJPMEEK_01429 1.3e-196 mtnA 5.3.1.23 E Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
PAJPMEEK_01430 3.5e-227 mtnK 2.7.1.100 F Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
PAJPMEEK_01431 8.6e-150 mtnU 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
PAJPMEEK_01432 2e-227 mtnE 2.6.1.83 E Aminotransferase
PAJPMEEK_01433 2.3e-226 mtnW 5.3.2.5 G Catalyzes the enolization of 2,3-diketo-5- methylthiopentyl-1-phosphate (DK-MTP-1-P) into 2-hydroxy-3-keto-5- methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P)
PAJPMEEK_01434 4.4e-137 mtnX 3.1.3.87, 4.2.1.109 E Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
PAJPMEEK_01435 1.2e-114 mtnB 3.1.3.87, 4.1.2.17, 4.2.1.109, 5.1.3.4 E Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P)
PAJPMEEK_01436 3.8e-96 mtnD 1.13.11.53, 1.13.11.54 S Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
PAJPMEEK_01437 3.4e-10 S Spo0E like sporulation regulatory protein
PAJPMEEK_01438 4.3e-275 kinD 2.7.13.3 T COG0642 Signal transduction histidine kinase
PAJPMEEK_01439 1.5e-77 ykvE K transcriptional
PAJPMEEK_01440 2.7e-127 motB N Flagellar motor protein
PAJPMEEK_01441 1.1e-136 motA N flagellar motor
PAJPMEEK_01442 0.0 clpE O Belongs to the ClpA ClpB family
PAJPMEEK_01443 1.4e-184 ykvI S membrane
PAJPMEEK_01444 6.5e-191
PAJPMEEK_01445 1.5e-126 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
PAJPMEEK_01446 6.3e-81 queD 4.1.2.50, 4.2.3.12 H synthase
PAJPMEEK_01447 1.9e-138 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
PAJPMEEK_01448 7.7e-96 queF 1.7.1.13 S Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
PAJPMEEK_01450 1.5e-58 ykvN K Transcriptional regulator
PAJPMEEK_01451 2.4e-133 IQ Enoyl-(Acyl carrier protein) reductase
PAJPMEEK_01452 1.4e-32 queF 1.7.1.13 S Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
PAJPMEEK_01453 1.9e-43 ykvR S Protein of unknown function (DUF3219)
PAJPMEEK_01454 7.8e-25 ykvS S protein conserved in bacteria
PAJPMEEK_01455 3.9e-27
PAJPMEEK_01456 9.1e-110 ykvT 3.5.1.28 M Cell Wall Hydrolase
PAJPMEEK_01457 6.2e-241 ykvU S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PAJPMEEK_01458 2.7e-88 stoA CO thiol-disulfide
PAJPMEEK_01459 0.0 cadA 3.6.3.3, 3.6.3.5 P COG2217 Cation transport ATPase
PAJPMEEK_01460 9.1e-206 pepQ 3.4.13.9 E COG0006 Xaa-Pro aminopeptidase
PAJPMEEK_01462 2.3e-176 ykvZ 5.1.1.1 K Transcriptional regulator
PAJPMEEK_01463 5.1e-156 glcT K antiterminator
PAJPMEEK_01464 0.0 ptsG 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PAJPMEEK_01465 2.1e-39 ptsH G phosphocarrier protein HPr
PAJPMEEK_01466 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PAJPMEEK_01467 6.1e-38 splA S Transcriptional regulator
PAJPMEEK_01468 3.5e-191 splB 4.1.99.14 L Spore photoproduct lyase
PAJPMEEK_01469 2.4e-265 mcpC NT chemotaxis protein
PAJPMEEK_01470 2.5e-158 glxR 1.1.1.31, 1.1.1.60 I COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
PAJPMEEK_01471 1.2e-54
PAJPMEEK_01472 8.6e-13 nrgB K Belongs to the P(II) protein family
PAJPMEEK_01473 7.3e-117 ykwD J protein with SCP PR1 domains
PAJPMEEK_01474 0.0 mrdA 3.4.16.4 M Penicillin-binding Protein
PAJPMEEK_01475 3.4e-290 pilS 2.1.1.80, 2.7.13.3, 3.1.1.61 T Histidine kinase
PAJPMEEK_01476 3.9e-215 patA 2.6.1.1 E Aminotransferase
PAJPMEEK_01477 2.3e-09
PAJPMEEK_01478 2.4e-167 cheV 2.7.13.3 T Chemotaxis protein CheV
PAJPMEEK_01479 1.4e-83 ykyB S YkyB-like protein
PAJPMEEK_01480 7.8e-241 ykuC EGP Major facilitator Superfamily
PAJPMEEK_01481 1.2e-88 ykuD S protein conserved in bacteria
PAJPMEEK_01482 4e-156 ykuE S Metallophosphoesterase
PAJPMEEK_01483 1.4e-141 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PAJPMEEK_01484 1.5e-233 ykuI T Diguanylate phosphodiesterase
PAJPMEEK_01485 3.9e-37 ykuJ S protein conserved in bacteria
PAJPMEEK_01486 1.7e-93 ykuK S Ribonuclease H-like
PAJPMEEK_01487 2.5e-26 ykzF S Antirepressor AbbA
PAJPMEEK_01488 1e-75 ykuL S CBS domain
PAJPMEEK_01489 4.6e-168 ccpC K Transcriptional regulator
PAJPMEEK_01490 1.3e-89 fld C Flavodoxin
PAJPMEEK_01491 4.5e-171 ykuO
PAJPMEEK_01492 3.5e-79 fld C Flavodoxin
PAJPMEEK_01493 8.8e-77 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PAJPMEEK_01494 7.6e-216 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PAJPMEEK_01495 4.8e-38 ykuS S Belongs to the UPF0180 family
PAJPMEEK_01496 1.3e-140 ykuT M Mechanosensitive ion channel
PAJPMEEK_01497 5e-81 ykuV CO thiol-disulfide
PAJPMEEK_01498 1.5e-98 rok K Repressor of ComK
PAJPMEEK_01499 1.9e-162 yknT
PAJPMEEK_01500 4.1e-107 mobA 2.7.7.77 H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
PAJPMEEK_01501 2.9e-190 moeB 2.7.7.73, 2.7.7.80 H COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
PAJPMEEK_01502 9.3e-242 moeA 2.10.1.1 H molybdopterin
PAJPMEEK_01503 2.6e-94 mobB 2.10.1.1, 2.7.7.77 H molybdopterin-guanine dinucleotide biosynthesis protein
PAJPMEEK_01504 6e-82 moaE 2.8.1.12 H COG0314 Molybdopterin converting factor, large subunit
PAJPMEEK_01505 5.7e-33 moaD 2.8.1.12 H Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
PAJPMEEK_01506 3.5e-102 yknW S Yip1 domain
PAJPMEEK_01507 4e-172 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PAJPMEEK_01508 6.1e-123 macB V ABC transporter, ATP-binding protein
PAJPMEEK_01509 4.1e-212 yknZ V ABC transporter (permease)
PAJPMEEK_01510 1.1e-133 fruR K Transcriptional regulator
PAJPMEEK_01511 2e-166 fruK 2.7.1.11, 2.7.1.56 G Belongs to the carbohydrate kinase PfkB family
PAJPMEEK_01512 0.0 fruA 2.7.1.202 GT COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type)
PAJPMEEK_01513 1.5e-106 sipT 3.4.21.89 U Belongs to the peptidase S26 family
PAJPMEEK_01514 1.5e-37 ykoA
PAJPMEEK_01515 2.2e-309 ybiT S COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PAJPMEEK_01516 6.9e-167 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PAJPMEEK_01517 1.3e-237 ampS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
PAJPMEEK_01518 5.5e-12 S Uncharacterized protein YkpC
PAJPMEEK_01519 6.9e-184 mreB D Rod-share determining protein MreBH
PAJPMEEK_01520 2.1e-45 abrB K of stationary sporulation gene expression
PAJPMEEK_01521 3.7e-246 kinC 2.7.13.3 T COG0642 Signal transduction histidine kinase
PAJPMEEK_01522 4.1e-150 ykqA P Gamma-glutamyl cyclotransferase, AIG2-like
PAJPMEEK_01523 2e-115 ktrA P COG0569 K transport systems, NAD-binding component
PAJPMEEK_01524 0.0 ade 3.5.4.2 F Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PAJPMEEK_01525 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PAJPMEEK_01526 8.2e-31 ykzG S Belongs to the UPF0356 family
PAJPMEEK_01527 3.9e-147 ykrA S hydrolases of the HAD superfamily
PAJPMEEK_01528 1.2e-100 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PAJPMEEK_01530 1.3e-103 recN L Putative cell-wall binding lipoprotein
PAJPMEEK_01531 0.0 fabD 1.13.12.16, 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
PAJPMEEK_01532 0.0 Q Polyketide synthase of type I
PAJPMEEK_01533 0.0 Q polyketide synthase
PAJPMEEK_01534 0.0 Q Polyketide synthase of type I
PAJPMEEK_01535 0.0 Q Polyketide synthase of type I
PAJPMEEK_01536 0.0 Q Polyketide synthase of type I
PAJPMEEK_01537 0.0 Q Polyketide synthase of type I
PAJPMEEK_01538 0.0 bioH 2.1.1.197, 3.1.1.85, 4.2.99.20 IQ Phosphopantetheine attachment site
PAJPMEEK_01539 5.8e-213 V Beta-lactamase
PAJPMEEK_01540 2.7e-205 pdhA 1.2.4.1, 1.2.4.4 C COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PAJPMEEK_01541 4.2e-178 pdhB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PAJPMEEK_01542 3.4e-231 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PAJPMEEK_01543 5e-241 lpdA 1.8.1.4 C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PAJPMEEK_01544 3e-44 slp CO COG0526, thiol-disulfide isomerase and thioredoxins
PAJPMEEK_01545 4.1e-139 pdaA_2 3.5.1.104 G Polysaccharide deacetylase
PAJPMEEK_01546 3.5e-277 speA 4.1.1.19 E Arginine
PAJPMEEK_01547 1.6e-42 yktA S Belongs to the UPF0223 family
PAJPMEEK_01548 4.9e-119 yktB S Belongs to the UPF0637 family
PAJPMEEK_01549 9.7e-25 ykzI
PAJPMEEK_01550 2.1e-151 suhB 3.1.3.25 G Inositol monophosphatase
PAJPMEEK_01551 1.2e-82 ykzC S Acetyltransferase (GNAT) family
PAJPMEEK_01552 6.1e-296 mpl 3.4.24.28, 3.4.24.29 E Peptidase M4
PAJPMEEK_01553 1.7e-13 sigC S Putative zinc-finger
PAJPMEEK_01554 1.3e-39 ylaE
PAJPMEEK_01555 6.7e-24 S Family of unknown function (DUF5325)
PAJPMEEK_01556 0.0 typA T GTP-binding protein TypA
PAJPMEEK_01557 1.7e-48 ylaH S YlaH-like protein
PAJPMEEK_01558 1e-33 ylaI S protein conserved in bacteria
PAJPMEEK_01559 2.3e-105 ylaJ S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PAJPMEEK_01560 2.2e-246 phoH T ATPase related to phosphate starvation-inducible protein PhoH
PAJPMEEK_01561 1.1e-83 ylaL S Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
PAJPMEEK_01562 7e-175 glsA 3.5.1.2 E Belongs to the glutaminase family
PAJPMEEK_01563 8.7e-44 ylaN S Belongs to the UPF0358 family
PAJPMEEK_01564 2.9e-213 ftsW D Belongs to the SEDS family
PAJPMEEK_01565 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PAJPMEEK_01566 4.5e-166 ctaA 2.5.1.141 O Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group
PAJPMEEK_01567 3.2e-164 ctaB 2.5.1.141 O Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
PAJPMEEK_01568 1.4e-190 ctaC 1.9.3.1 C Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)
PAJPMEEK_01569 0.0 ctaD 1.10.3.12, 1.9.3.1 C Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
PAJPMEEK_01570 2.4e-110 cyoC 1.10.3.12, 1.9.3.1 C COG1845 Heme copper-type cytochrome quinol oxidase, subunit 3
PAJPMEEK_01571 2.7e-52 ctaF 1.10.3.12, 1.9.3.1 C COG3125 Heme copper-type cytochrome quinol oxidase, subunit 4
PAJPMEEK_01572 9.7e-166 ctaG S cytochrome c oxidase
PAJPMEEK_01573 2.2e-60 ylbA S YugN-like family
PAJPMEEK_01574 4.1e-72 ylbB T COG0517 FOG CBS domain
PAJPMEEK_01575 2.1e-199 ylbC S protein with SCP PR1 domains
PAJPMEEK_01576 6.5e-56 ylbD S Putative coat protein
PAJPMEEK_01577 8.8e-37 ylbE S YlbE-like protein
PAJPMEEK_01578 1.2e-71 ylbF S Belongs to the UPF0342 family
PAJPMEEK_01579 5.5e-43 ylbG S UPF0298 protein
PAJPMEEK_01581 1.2e-97 rsmD 2.1.1.171 L Methyltransferase
PAJPMEEK_01582 1.1e-83 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PAJPMEEK_01583 9.8e-217 ylbJ S Sporulation integral membrane protein YlbJ
PAJPMEEK_01584 7.5e-138 ylbK S esterase of the alpha-beta hydrolase superfamily
PAJPMEEK_01585 2.1e-188 ylbL T Belongs to the peptidase S16 family
PAJPMEEK_01586 4.6e-230 ylbM S Belongs to the UPF0348 family
PAJPMEEK_01587 2.7e-91 yceD S metal-binding, possibly nucleic acid-binding protein
PAJPMEEK_01588 1.2e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PAJPMEEK_01589 1.2e-71 ylbO S SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
PAJPMEEK_01590 1.2e-88 ylbP K n-acetyltransferase
PAJPMEEK_01591 2.9e-165 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PAJPMEEK_01592 2.3e-311 bshC S Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
PAJPMEEK_01593 8.9e-78 mraZ K Belongs to the MraZ family
PAJPMEEK_01594 5.6e-172 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PAJPMEEK_01595 8.3e-52 ftsL D Essential cell division protein
PAJPMEEK_01596 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PAJPMEEK_01597 0.0 ftsI 3.4.16.4 M stage V sporulation protein D
PAJPMEEK_01598 1.5e-280 murE 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PAJPMEEK_01599 1.7e-171 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PAJPMEEK_01600 2.6e-255 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PAJPMEEK_01601 4.8e-185 spoVE D Belongs to the SEDS family
PAJPMEEK_01602 4.6e-202 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PAJPMEEK_01603 5.6e-169 murB 1.3.1.98 M cell wall formation
PAJPMEEK_01604 3e-134 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PAJPMEEK_01605 2e-228 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PAJPMEEK_01606 1.2e-203 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PAJPMEEK_01607 0.0 bpr O COG1404 Subtilisin-like serine proteases
PAJPMEEK_01608 8.3e-160 spoIIGA M aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR
PAJPMEEK_01609 6.8e-117 sigE K sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PAJPMEEK_01610 1.1e-139 sigG K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PAJPMEEK_01611 1.9e-144 modF 3.6.3.21, 3.6.3.34 P COG1119 ABC-type molybdenum transport system, ATPase component photorepair protein PhrA
PAJPMEEK_01612 8e-254 argE 3.5.1.16 E Acetylornithine deacetylase
PAJPMEEK_01613 6.4e-38 ylmC S sporulation protein
PAJPMEEK_01614 2.6e-160 yfiH S Belongs to the multicopper oxidase YfiH RL5 family
PAJPMEEK_01615 3e-122 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PAJPMEEK_01616 1.5e-61 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PAJPMEEK_01617 5.2e-41 yggT S membrane
PAJPMEEK_01618 5.5e-141 ylmH 5.4.99.23, 5.4.99.24 S conserved protein, contains S4-like domain
PAJPMEEK_01619 8.9e-68 divIVA D Cell division initiation protein
PAJPMEEK_01620 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PAJPMEEK_01621 3.4e-64 dksA T COG1734 DnaK suppressor protein
PAJPMEEK_01622 5.2e-78 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PAJPMEEK_01623 4.6e-163 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PAJPMEEK_01624 1e-93 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PAJPMEEK_01625 1.8e-232 pyrP F Xanthine uracil
PAJPMEEK_01626 1.2e-166 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PAJPMEEK_01627 2.3e-248 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PAJPMEEK_01628 7.2e-211 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PAJPMEEK_01629 0.0 carB 6.3.5.5 F Belongs to the CarB family
PAJPMEEK_01630 1.2e-143 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
PAJPMEEK_01631 6e-174 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PAJPMEEK_01632 4.7e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PAJPMEEK_01633 1.1e-115 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PAJPMEEK_01635 3.8e-141 cysH 1.8.4.10, 1.8.4.8, 2.7.1.25 EH Belongs to the PAPS reductase family. CysH subfamily
PAJPMEEK_01636 1.1e-176 cysP P phosphate transporter
PAJPMEEK_01637 1.3e-223 sat 2.7.7.4 P Belongs to the sulfate adenylyltransferase family
PAJPMEEK_01638 1.1e-109 cysC 2.7.1.25 P Catalyzes the synthesis of activated sulfate
PAJPMEEK_01639 8.2e-145 hemD 2.1.1.107, 4.2.1.75 H Belongs to the precorrin methyltransferase family
PAJPMEEK_01640 3.4e-146 cbiX 4.99.1.3, 4.99.1.4, 5.4.99.60, 5.4.99.61 S Sirohydrochlorin ferrochelatase
PAJPMEEK_01641 9e-81 cysG 1.3.1.76, 4.99.1.4 H Siroheme synthase
PAJPMEEK_01642 0.0 FbpA K RNA-binding protein homologous to eukaryotic snRNP
PAJPMEEK_01643 0.0 yloB 3.6.3.8 P COG0474 Cation transport ATPase
PAJPMEEK_01644 6.5e-154 yloC S stress-induced protein
PAJPMEEK_01645 1.5e-40 ylzA S Belongs to the UPF0296 family
PAJPMEEK_01646 8.1e-111 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
PAJPMEEK_01647 2.8e-28 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PAJPMEEK_01648 9.7e-225 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PAJPMEEK_01649 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PAJPMEEK_01650 6e-85 def 2.1.2.9, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PAJPMEEK_01651 1e-173 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PAJPMEEK_01652 6e-252 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PAJPMEEK_01653 9e-206 rlmN 2.1.1.192, 2.1.1.224 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PAJPMEEK_01654 5.1e-139 stp 3.1.3.16 T phosphatase
PAJPMEEK_01655 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
PAJPMEEK_01656 1.7e-165 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PAJPMEEK_01657 4.7e-117 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PAJPMEEK_01658 6.9e-121 thiN 2.7.6.2 H thiamine pyrophosphokinase
PAJPMEEK_01659 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PAJPMEEK_01660 9.4e-59 asp S protein conserved in bacteria
PAJPMEEK_01661 1.7e-304 yloV S kinase related to dihydroxyacetone kinase
PAJPMEEK_01662 4.8e-117 sdaAB 4.3.1.17 E L-serine dehydratase
PAJPMEEK_01663 7.1e-156 sdaAA 4.3.1.17 E L-serine dehydratase
PAJPMEEK_01664 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PAJPMEEK_01665 2e-92 fapR K Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism
PAJPMEEK_01666 3.6e-177 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PAJPMEEK_01667 2.9e-168 fabD 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
PAJPMEEK_01668 4.6e-129 IQ reductase
PAJPMEEK_01669 2.8e-32 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PAJPMEEK_01670 4.4e-135 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PAJPMEEK_01671 0.0 smc D Required for chromosome condensation and partitioning
PAJPMEEK_01672 8.3e-174 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PAJPMEEK_01673 3.2e-53 S Phosphotransferase enzyme family
PAJPMEEK_01674 5.3e-68 S Phosphotransferase enzyme family
PAJPMEEK_01675 4.3e-50 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PAJPMEEK_01676 1.8e-232 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PAJPMEEK_01677 1.4e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PAJPMEEK_01678 1.7e-35 ylqC S Belongs to the UPF0109 family
PAJPMEEK_01679 1.3e-61 ylqD S YlqD protein
PAJPMEEK_01680 2e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PAJPMEEK_01681 2.7e-137 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PAJPMEEK_01682 1.9e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PAJPMEEK_01683 1.1e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PAJPMEEK_01684 5.3e-128 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PAJPMEEK_01685 2e-308 ylqG
PAJPMEEK_01686 6.7e-44 ylqH S homolog of the cytoplasmic domain of flagellar protein FhlB
PAJPMEEK_01687 6.8e-212 sucC 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PAJPMEEK_01688 1.1e-167 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PAJPMEEK_01689 7.3e-169 dprA LU Rossmann fold nucleotide-binding protein involved in DNA uptake
PAJPMEEK_01690 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PAJPMEEK_01691 4.8e-246 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PAJPMEEK_01692 7.2e-172 xerC L tyrosine recombinase XerC
PAJPMEEK_01693 6.7e-93 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PAJPMEEK_01694 4.5e-234 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PAJPMEEK_01695 1.2e-135 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
PAJPMEEK_01696 3e-55 flgB N Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body
PAJPMEEK_01697 9e-75 flgC N Belongs to the flagella basal body rod proteins family
PAJPMEEK_01698 2.5e-31 fliE N Flagellar hook-basal body
PAJPMEEK_01699 1.4e-263 fliF N The M ring may be actively involved in energy transduction
PAJPMEEK_01700 1.3e-177 fliG N One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
PAJPMEEK_01701 3.7e-89 fliH NU COG1317 Flagellar biosynthesis type III secretory pathway protein
PAJPMEEK_01702 5e-243 fliI 3.6.3.14 NU COG1157 Flagellar biosynthesis type III secretory pathway ATPase
PAJPMEEK_01703 1.7e-70 fliJ N Flagellar biosynthesis chaperone
PAJPMEEK_01704 1.3e-47 ylxF S MgtE intracellular N domain
PAJPMEEK_01705 4.7e-204 fliK N Flagellar hook-length control protein
PAJPMEEK_01706 1.4e-72 flgD N Flagellar basal body rod modification protein
PAJPMEEK_01707 4e-139 flgG N Flagellar basal body rod
PAJPMEEK_01708 2.4e-58 fliL N Controls the rotational direction of flagella during chemotaxis
PAJPMEEK_01709 5.4e-181 fliM N One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
PAJPMEEK_01710 2.7e-189 fliN N FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
PAJPMEEK_01711 1.2e-58 cheB 3.1.1.61, 3.5.1.44 T response regulator
PAJPMEEK_01712 1.3e-111 fliZ N Flagellar biosynthesis protein, FliO
PAJPMEEK_01713 4.3e-110 fliP N Plays a role in the flagellum-specific transport system
PAJPMEEK_01714 2e-37 fliQ N Role in flagellar biosynthesis
PAJPMEEK_01715 8.9e-131 fliR N Flagellar biosynthetic protein FliR
PAJPMEEK_01716 2.4e-190 flhB N Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PAJPMEEK_01717 0.0 flhA N Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PAJPMEEK_01718 6.7e-193 flhF N Flagellar biosynthesis regulator FlhF
PAJPMEEK_01719 3.5e-155 flhG D Belongs to the ParA family
PAJPMEEK_01720 1.3e-193 cheB 3.1.1.61, 3.5.1.44 NT catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
PAJPMEEK_01721 0.0 cheA 2.7.13.3 NT COG0643 Chemotaxis protein histidine kinase and related kinases
PAJPMEEK_01722 8.8e-81 cheW NT COG0835 Chemotaxis signal transduction protein
PAJPMEEK_01723 1.8e-110 cheC NT COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation
PAJPMEEK_01724 8.6e-87 cheD 3.5.1.44 NT Deamidates glutamine residues to glutamate on methyl- accepting chemotaxis receptors (MCPs). CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the CheA kinase
PAJPMEEK_01725 3.9e-139 sigD K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PAJPMEEK_01726 5.8e-53 ylxL
PAJPMEEK_01727 3.8e-131 rpsB J Belongs to the universal ribosomal protein uS2 family
PAJPMEEK_01728 5.3e-156 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PAJPMEEK_01729 9.4e-127 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PAJPMEEK_01730 1.9e-90 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PAJPMEEK_01731 2.9e-145 uppS 2.5.1.31 I Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PAJPMEEK_01732 6.9e-139 cdsA 2.7.7.41 S Belongs to the CDS family
PAJPMEEK_01733 3.3e-214 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PAJPMEEK_01734 1.5e-233 rasP M zinc metalloprotease
PAJPMEEK_01735 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PAJPMEEK_01736 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PAJPMEEK_01737 3.9e-81 rimP S Required for maturation of 30S ribosomal subunits
PAJPMEEK_01738 5.4e-206 nusA K Participates in both transcription termination and antitermination
PAJPMEEK_01739 1.7e-36 ylxR K nucleic-acid-binding protein implicated in transcription termination
PAJPMEEK_01740 1.8e-47 ylxQ J ribosomal protein
PAJPMEEK_01741 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PAJPMEEK_01742 1.1e-43 ylxP S protein conserved in bacteria
PAJPMEEK_01743 3.3e-56 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PAJPMEEK_01744 3.1e-170 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PAJPMEEK_01745 1.7e-181 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PAJPMEEK_01746 1e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PAJPMEEK_01747 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PAJPMEEK_01748 8e-182 ylxY 3.5.1.104 G Sporulation protein, polysaccharide deacetylase
PAJPMEEK_01749 3.6e-235 pepR S Belongs to the peptidase M16 family
PAJPMEEK_01750 2.6e-42 ymxH S YlmC YmxH family
PAJPMEEK_01751 6.1e-160 spoVFA 1.1.1.29, 1.1.1.399, 1.1.1.95 CH Dipicolinate synthase subunit A
PAJPMEEK_01752 2e-106 spoVFB H Together with DpaA, catalyzes the conversion of dihydrodipicolinate to dipicolinate (DPA)
PAJPMEEK_01753 4.9e-193 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PAJPMEEK_01754 1.6e-219 dapG 1.1.1.3, 2.7.2.4 E Belongs to the aspartokinase family
PAJPMEEK_01755 6.2e-157 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PAJPMEEK_01756 1.2e-308 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PAJPMEEK_01757 4.5e-129 tepA 3.4.21.92 OU COG0740 Protease subunit of ATP-dependent Clp proteases
PAJPMEEK_01758 6.3e-31 S YlzJ-like protein
PAJPMEEK_01759 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PAJPMEEK_01760 1.8e-133 ymfC K Transcriptional regulator
PAJPMEEK_01761 1.9e-229 ymfD EGP Major facilitator Superfamily
PAJPMEEK_01762 8.2e-76 K helix_turn_helix multiple antibiotic resistance protein
PAJPMEEK_01763 0.0 ydgH S drug exporters of the RND superfamily
PAJPMEEK_01764 1.2e-238 ymfF S Peptidase M16
PAJPMEEK_01765 3.4e-244 ymfH S zinc protease
PAJPMEEK_01766 4.6e-129 ymfI 1.1.1.100, 1.3.1.28 S Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
PAJPMEEK_01767 9.7e-42 ymfJ S Protein of unknown function (DUF3243)
PAJPMEEK_01768 3.5e-143 ymfK S Protein of unknown function (DUF3388)
PAJPMEEK_01769 2.6e-126 ymfM S protein conserved in bacteria
PAJPMEEK_01770 3.8e-102 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PAJPMEEK_01771 1.1e-231 cinA 3.5.1.42 S Belongs to the CinA family
PAJPMEEK_01772 6.2e-188 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PAJPMEEK_01773 5e-194 pbpX V Beta-lactamase
PAJPMEEK_01774 4.2e-241 rny S Endoribonuclease that initiates mRNA decay
PAJPMEEK_01775 4.9e-153 ymdB S protein conserved in bacteria
PAJPMEEK_01776 1.2e-36 spoVS S Stage V sporulation protein S
PAJPMEEK_01777 3.5e-199 tdh 1.1.1.103 C Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate
PAJPMEEK_01778 6.1e-216 kbl 2.3.1.29, 2.3.1.47 H Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
PAJPMEEK_01779 2.7e-296 miaB 2.8.4.3 J Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PAJPMEEK_01780 3.5e-68 ymcA 3.6.3.21 S Belongs to the UPF0342 family
PAJPMEEK_01781 1.7e-88 cotE S Spore coat protein
PAJPMEEK_01782 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PAJPMEEK_01783 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PAJPMEEK_01785 3.9e-130 pksB 3.1.2.6 S Polyketide biosynthesis
PAJPMEEK_01786 3.7e-162 fabD 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
PAJPMEEK_01787 7.3e-183 pksD Q Acyl transferase domain
PAJPMEEK_01788 0.0 fabD 1.13.12.16, 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
PAJPMEEK_01789 1.3e-35 acpK IQ Phosphopantetheine attachment site
PAJPMEEK_01790 4.3e-244 pksG 2.3.3.10 I synthase
PAJPMEEK_01791 5.9e-143 pksH 4.2.1.18 I enoyl-CoA hydratase
PAJPMEEK_01792 9.4e-138 pksI I Belongs to the enoyl-CoA hydratase isomerase family
PAJPMEEK_01793 0.0 rhiB IQ polyketide synthase
PAJPMEEK_01794 0.0 Q Polyketide synthase of type I
PAJPMEEK_01795 0.0 pfaA 4.1.1.35 GT4 Q Polyketide synthase of type I
PAJPMEEK_01796 0.0 dhbF IQ polyketide synthase
PAJPMEEK_01797 0.0 pks13 HQ Beta-ketoacyl synthase
PAJPMEEK_01798 4.8e-232 cypA C Cytochrome P450
PAJPMEEK_01799 6.4e-78 nucB M Deoxyribonuclease NucA/NucB
PAJPMEEK_01800 3.6e-118 yoaK S Membrane
PAJPMEEK_01801 1.4e-62 ymzB
PAJPMEEK_01802 5.2e-256 aprX O Belongs to the peptidase S8 family
PAJPMEEK_01804 4.1e-127 ymaC S Replication protein
PAJPMEEK_01805 5.4e-80 ymaD O redox protein, regulator of disulfide bond formation
PAJPMEEK_01806 5.2e-54 ebrB P Small Multidrug Resistance protein
PAJPMEEK_01807 3.1e-48 ebrA P Small Multidrug Resistance protein
PAJPMEEK_01809 1.4e-47 ymaF S YmaF family
PAJPMEEK_01810 5.7e-172 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PAJPMEEK_01811 1.1e-33 hfq J RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs
PAJPMEEK_01812 2.5e-43
PAJPMEEK_01813 1.8e-20 ymzA
PAJPMEEK_01814 1e-66 nrdI 1.17.4.1 F Probably involved in ribonucleotide reductase function
PAJPMEEK_01815 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAJPMEEK_01816 4.5e-188 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAJPMEEK_01817 2.4e-110 ymaB S MutT family
PAJPMEEK_01818 1.6e-113 cwlC 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
PAJPMEEK_01819 1.3e-176 spoVK O stage V sporulation protein K
PAJPMEEK_01820 2.5e-231 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PAJPMEEK_01821 5.7e-244 ynbB 4.4.1.1 P COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance
PAJPMEEK_01822 1.6e-67 glnR K transcriptional
PAJPMEEK_01823 1.9e-261 glnA 6.3.1.2 E glutamine synthetase
PAJPMEEK_01824 1.9e-153 L Belongs to the 'phage' integrase family
PAJPMEEK_01825 1.7e-11
PAJPMEEK_01826 4.9e-78 yokF 3.1.31.1 L RNA catabolic process
PAJPMEEK_01827 1.5e-92 G SMI1-KNR4 cell-wall
PAJPMEEK_01828 4.2e-165 V HNH endonuclease
PAJPMEEK_01829 8.8e-219 yobL L A nuclease of the HNH/ENDO VII superfamily with conserved LHH
PAJPMEEK_01830 4.5e-100 yokK S SMI1 / KNR4 family
PAJPMEEK_01832 7.7e-127 yunB S Sporulation protein YunB (Spo_YunB)
PAJPMEEK_01833 3.1e-40 S YolD-like protein
PAJPMEEK_01834 9.3e-223 S impB/mucB/samB family C-terminal domain
PAJPMEEK_01836 7.4e-89 S response regulator aspartate phosphatase
PAJPMEEK_01839 2.3e-32 S Bacteriophage holin
PAJPMEEK_01841 2.9e-76 xlyB 3.5.1.104, 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
PAJPMEEK_01842 7.6e-219 M Pectate lyase superfamily protein
PAJPMEEK_01843 4.1e-94
PAJPMEEK_01844 5.9e-200 S Pfam Transposase IS66
PAJPMEEK_01845 7.2e-85 S Phage tail protein
PAJPMEEK_01846 0.0 S peptidoglycan catabolic process
PAJPMEEK_01847 2.3e-52
PAJPMEEK_01850 2.4e-173 xerH A Belongs to the 'phage' integrase family
PAJPMEEK_01851 1.6e-49
PAJPMEEK_01852 4.1e-57
PAJPMEEK_01853 4e-84 3.1.4.46, 5.4.2.11 C glycerophosphoryl diester phosphodiesterase
PAJPMEEK_01854 1.3e-12
PAJPMEEK_01855 1.2e-53 S Domain of unknown function (DUF2479)
PAJPMEEK_01856 3e-49
PAJPMEEK_01858 7.8e-58
PAJPMEEK_01859 6.6e-96
PAJPMEEK_01860 1.3e-85
PAJPMEEK_01861 3.4e-54
PAJPMEEK_01864 4.7e-69
PAJPMEEK_01866 4.1e-39
PAJPMEEK_01867 2.8e-19
PAJPMEEK_01868 9.7e-141
PAJPMEEK_01869 1.8e-16
PAJPMEEK_01873 1.2e-219 S Calcineurin-like phosphoesterase superfamily domain
PAJPMEEK_01876 1e-33 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PAJPMEEK_01877 0.0
PAJPMEEK_01881 3.4e-59 ftsZ D Tubulin/FtsZ family, GTPase domain
PAJPMEEK_01883 5.2e-218
PAJPMEEK_01884 2.3e-126 S ATP-dependent DNA helicase activity
PAJPMEEK_01885 1.8e-20 I Acyltransferase family
PAJPMEEK_01887 8.5e-46
PAJPMEEK_01893 2.9e-52
PAJPMEEK_01902 6.1e-144
PAJPMEEK_01907 1e-145 L Belongs to the 'phage' integrase family
PAJPMEEK_01908 1.9e-224 S DNA-sulfur modification-associated
PAJPMEEK_01909 1.7e-155
PAJPMEEK_01910 8.8e-31 K Transcriptional regulator
PAJPMEEK_01925 9e-23
PAJPMEEK_01928 5.7e-73
PAJPMEEK_01931 7.7e-65
PAJPMEEK_01933 1.9e-139 ligB 6.5.1.1, 6.5.1.6, 6.5.1.7 L ATP-dependent DNA ligase
PAJPMEEK_01934 1e-122 yoqW S Belongs to the SOS response-associated peptidase family
PAJPMEEK_01936 1.5e-158
PAJPMEEK_01940 5.6e-83 S Pfam:DUF867
PAJPMEEK_01941 8.4e-222 M Parallel beta-helix repeats
PAJPMEEK_01945 1.5e-12 S AAA domain
PAJPMEEK_01947 6.5e-146 dnaG 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PAJPMEEK_01948 4e-57 S DNA primase activity
PAJPMEEK_01949 2.7e-124 recJ L Single-stranded-DNA-specific exonuclease RecJ
PAJPMEEK_01950 3.1e-22 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PAJPMEEK_01951 1.6e-52 DR0488 S protein conserved in bacteria
PAJPMEEK_01956 2.3e-69 tmk 2.1.1.45, 2.7.4.9 F dTDP biosynthetic process
PAJPMEEK_01957 3.3e-89 yorS 3.1.3.5 S 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
PAJPMEEK_01959 2.5e-66 2.1.1.113, 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
PAJPMEEK_01960 1.1e-116 2.1.1.37 L Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
PAJPMEEK_01965 1.2e-10
PAJPMEEK_01972 2.3e-07
PAJPMEEK_01978 3.1e-55 S NrdI Flavodoxin like
PAJPMEEK_01979 4.9e-115 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAJPMEEK_01980 5.2e-40 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAJPMEEK_01981 1.1e-170 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAJPMEEK_01983 3.4e-172 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PAJPMEEK_01984 7.2e-26
PAJPMEEK_01985 1.1e-31 O Glutaredoxin
PAJPMEEK_01986 8.1e-73 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F Deoxyuridine 5'-triphosphate
PAJPMEEK_01992 1.4e-150 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PAJPMEEK_01993 6.5e-29 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PAJPMEEK_01995 5.3e-67
PAJPMEEK_01996 1.6e-19 V regulation of methylation-dependent chromatin silencing
PAJPMEEK_01997 1.9e-77 S Calcineurin-like phosphoesterase
PAJPMEEK_02006 4.9e-88 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PAJPMEEK_02007 6e-26
PAJPMEEK_02008 1.1e-23
PAJPMEEK_02009 1.8e-94
PAJPMEEK_02011 2.8e-215 mrjp G Major royal jelly protein
PAJPMEEK_02012 9.6e-253 xynT G MFS/sugar transport protein
PAJPMEEK_02013 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
PAJPMEEK_02014 3.2e-217 xylR GK ROK family
PAJPMEEK_02015 2.9e-262 xylA 5.3.1.5 G Belongs to the xylose isomerase family
PAJPMEEK_02016 4e-289 xylB 2.7.1.12, 2.7.1.17, 2.7.1.189 G xylulose kinase
PAJPMEEK_02017 0.0 pps 2.7.9.2 GT phosphoenolpyruvate synthase
PAJPMEEK_02022 5.4e-17
PAJPMEEK_02023 1.1e-53 dinB S DinB family
PAJPMEEK_02024 6.7e-187 adhP 1.1.1.1 C alcohol dehydrogenase
PAJPMEEK_02025 3.6e-145 yoaP 3.1.3.18 K YoaP-like
PAJPMEEK_02026 1.8e-98 J Acetyltransferase (GNAT) domain
PAJPMEEK_02027 4.8e-37
PAJPMEEK_02030 8.6e-98 ynaE S Domain of unknown function (DUF3885)
PAJPMEEK_02032 5.4e-203 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PAJPMEEK_02033 1.3e-116 AA10,CBM73 S Pfam:Chitin_bind_3
PAJPMEEK_02035 3.9e-14 yvgO
PAJPMEEK_02037 0.0 yobO M Pectate lyase superfamily protein
PAJPMEEK_02038 2.9e-78 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F Deoxyuridine 5'-triphosphate
PAJPMEEK_02039 1.1e-144 yndL S Replication protein
PAJPMEEK_02040 1.6e-07
PAJPMEEK_02041 1.2e-138 O COG0330 Membrane protease subunits, stomatin prohibitin homologs
PAJPMEEK_02042 5.4e-72 yndM S Protein of unknown function (DUF2512)
PAJPMEEK_02043 2.1e-12 yoaW
PAJPMEEK_02044 9e-110 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PAJPMEEK_02045 6.2e-51 yneA D Inhibits cell division during the SOS response. Affects a later stage of the cell division protein assembly, after the assembly of the Z ring, by probably suppressing recruitment of FtsL and or DivIC to the division machinery
PAJPMEEK_02046 3.5e-112 yneB L resolvase
PAJPMEEK_02047 9.8e-33 ynzC S UPF0291 protein
PAJPMEEK_02048 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PAJPMEEK_02049 1.3e-81 yneE S Sporulation inhibitor of replication protein sirA
PAJPMEEK_02050 2.3e-28 yneF S UPF0154 protein
PAJPMEEK_02051 3.1e-23 ynzD S Spo0E like sporulation regulatory protein
PAJPMEEK_02052 1.7e-125 ccdA O cytochrome c biogenesis protein
PAJPMEEK_02053 1.4e-57 cheB 3.1.1.61, 3.5.1.44 T cheY-homologous receiver domain
PAJPMEEK_02054 3.3e-75 yneJ O COG4846 Membrane protein involved in cytochrome C biogenesis
PAJPMEEK_02055 8.5e-75 yneK S Protein of unknown function (DUF2621)
PAJPMEEK_02056 2.9e-63 hspX O Spore coat protein
PAJPMEEK_02057 2.3e-19 sspP S Belongs to the SspP family
PAJPMEEK_02058 7.5e-15 sspO S Belongs to the SspO family
PAJPMEEK_02059 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PAJPMEEK_02060 3.7e-93 yneN CO alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
PAJPMEEK_02062 2.7e-33 tlp S Belongs to the Tlp family
PAJPMEEK_02063 8.3e-75 yneP S Thioesterase-like superfamily
PAJPMEEK_02064 9.2e-52 yneQ
PAJPMEEK_02065 1.3e-50 yneR S Belongs to the HesB IscA family
PAJPMEEK_02066 8.5e-94 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PAJPMEEK_02067 1.5e-68 yccU S CoA-binding protein
PAJPMEEK_02068 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PAJPMEEK_02069 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PAJPMEEK_02070 4.6e-13
PAJPMEEK_02071 5.1e-41 ynfC
PAJPMEEK_02072 1.6e-250 agcS E Sodium alanine symporter
PAJPMEEK_02073 1.4e-181 kdgK 2.7.1.45 G COG0524 Sugar kinases, ribokinase family
PAJPMEEK_02074 2.8e-193 rspB 1.1.1.380 E Alcohol dehydrogenase GroES-like domain
PAJPMEEK_02075 3.1e-113 eda 4.1.2.14, 4.1.3.42 G 2-dehydro-3-deoxy-phosphogluconate aldolase
PAJPMEEK_02076 1e-214 uxuA 4.2.1.8 G Catalyzes the dehydration of D-mannonate
PAJPMEEK_02077 2.4e-150 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PAJPMEEK_02078 5.4e-181 kdgR_1 K transcriptional
PAJPMEEK_02079 2.9e-224 exuT G Sugar (and other) transporter
PAJPMEEK_02080 5.2e-158 yndG S DoxX-like family
PAJPMEEK_02081 2.3e-78 yndH S Domain of unknown function (DUF4166)
PAJPMEEK_02082 6.7e-306 yndJ S YndJ-like protein
PAJPMEEK_02083 1.1e-09 yxlH EGP Major facilitator Superfamily
PAJPMEEK_02085 4.5e-216 S Platelet-activating factor acetylhydrolase, isoform II
PAJPMEEK_02086 5.1e-292 bglC5 3.2.1.4 GH5,GH9 G PFAM glycoside hydrolase family 5
PAJPMEEK_02087 1.3e-51 S Domain of unknown function (DUF4870)
PAJPMEEK_02088 2e-237 T PhoQ Sensor
PAJPMEEK_02089 3.4e-129 T Transcriptional regulatory protein, C terminal
PAJPMEEK_02090 1.8e-253 xynC 3.2.1.136 GH5 G Glycosyl hydrolase family 30 beta sandwich domain
PAJPMEEK_02091 2.1e-293 xynD3 3.2.1.55 CBM6,GH43 G Belongs to the glycosyl hydrolase 43 family
PAJPMEEK_02092 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAJPMEEK_02093 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAJPMEEK_02094 0.0 nrsA Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAJPMEEK_02095 1.7e-221 fabD 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
PAJPMEEK_02096 6.9e-139 IQ Catalyzes the formation of acetoacetate from 3-hydroxybutyrate
PAJPMEEK_02097 7.1e-121 scoB 2.8.3.5 I COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
PAJPMEEK_02098 8.4e-125 scoA 2.8.3.5 I COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
PAJPMEEK_02099 9.6e-256 yxjC EG COG2610 H gluconate symporter and related permeases
PAJPMEEK_02100 8.1e-224 bioI 1.14.14.46 C Cytochrome P450
PAJPMEEK_02101 9.7e-194 bioB 2.8.1.6 H Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
PAJPMEEK_02102 3.4e-129 bioD 6.3.3.3 H Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
PAJPMEEK_02103 5.1e-215 bioF 2.3.1.29, 2.3.1.47, 6.2.1.14 H Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
PAJPMEEK_02104 1.6e-260 bioA 2.6.1.105, 2.6.1.62 H Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor
PAJPMEEK_02105 6.3e-145 bioW 2.3.1.47, 6.2.1.14 H Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP
PAJPMEEK_02106 3.7e-72 yngA S membrane
PAJPMEEK_02107 2.1e-160 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PAJPMEEK_02108 4.1e-104 yngC S SNARE associated Golgi protein
PAJPMEEK_02109 1.1e-289 yngE 2.1.3.15, 6.4.1.3 I COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PAJPMEEK_02110 4.4e-138 yngF 4.2.1.17 I Belongs to the enoyl-CoA hydratase isomerase family
PAJPMEEK_02111 5.6e-169 mvaB 4.1.3.4, 6.4.1.4 E Hydroxymethylglutaryl-CoA lyase
PAJPMEEK_02112 2.4e-30 pycB 2.3.1.12, 6.4.1.1 I Biotin carboxyl carrier protein
PAJPMEEK_02113 7.1e-253 yngH 6.3.4.14, 6.4.1.2, 6.4.1.3, 6.4.1.4 I Biotin carboxylase
PAJPMEEK_02114 0.0 yngI IQ COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
PAJPMEEK_02115 2.8e-210 yngJ 1.3.8.1, 1.3.99.12 I acyl-CoA dehydrogenase
PAJPMEEK_02116 2.3e-300 yngK T Glycosyl hydrolase-like 10
PAJPMEEK_02117 1.1e-53 L COG2963 Transposase and inactivated derivatives
PAJPMEEK_02118 7.3e-71 L Integrase core domain
PAJPMEEK_02119 4.1e-65 yngL S Protein of unknown function (DUF1360)
PAJPMEEK_02120 0.0 Q D-alanine [D-alanyl carrier protein] ligase activity
PAJPMEEK_02121 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAJPMEEK_02122 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAJPMEEK_02123 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAJPMEEK_02124 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAJPMEEK_02126 2.9e-271 dacC 3.4.16.4 M D-alanyl-D-alanine carboxypeptidase
PAJPMEEK_02127 2e-188 yoxA 5.1.3.3 G Aldose 1-epimerase
PAJPMEEK_02128 4.6e-247 yoeA V MATE efflux family protein
PAJPMEEK_02129 1.3e-96 yoeB S IseA DL-endopeptidase inhibitor
PAJPMEEK_02131 2.2e-96 L Integrase
PAJPMEEK_02132 1.8e-34 yoeD G Helix-turn-helix domain
PAJPMEEK_02133 0.0 ggt 2.3.2.2, 3.4.19.13 E gamma-glutamyltransferase
PAJPMEEK_02134 1.2e-184 ybcL EGP Major facilitator Superfamily
PAJPMEEK_02135 1.8e-50 ybzH K Helix-turn-helix domain
PAJPMEEK_02136 4.5e-269 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PAJPMEEK_02137 5.2e-156 gltR1 K Transcriptional regulator
PAJPMEEK_02138 1.3e-187 yogA C COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases
PAJPMEEK_02139 1e-292 gltD 1.4.1.13, 1.4.1.14 E COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases
PAJPMEEK_02140 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase
PAJPMEEK_02141 5.1e-146 gltC K Transcriptional regulator
PAJPMEEK_02142 5.6e-203 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PAJPMEEK_02143 7.4e-141 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PAJPMEEK_02144 1e-61 rtp K Plays a role in DNA replication and termination (fork arrest mechanism). Two dimers of rtp bind to the two inverted repeat regions (IRI and IRII) present in the termination site. The binding of each dimer is centered on an 8 bp direct repeat
PAJPMEEK_02145 1.4e-77 lipB 2.3.1.181 K Acetyltransferase (GNAT) domain
PAJPMEEK_02146 5.2e-125 fabG 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PAJPMEEK_02147 8e-43 yoxC S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PAJPMEEK_02148 6.4e-142 yoxB
PAJPMEEK_02149 1.9e-204 yoaB EGP Major facilitator Superfamily
PAJPMEEK_02150 1.1e-275 yoaC 2.7.1.12, 2.7.1.17, 2.7.1.189 G FGGY family of carbohydrate kinases, C-terminal domain
PAJPMEEK_02151 5.7e-194 yoaD 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAJPMEEK_02152 0.0 yoaE C belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PAJPMEEK_02153 1.4e-25 yoaF
PAJPMEEK_02155 1.9e-98 hpr K helix_turn_helix multiple antibiotic resistance protein
PAJPMEEK_02156 1.1e-43
PAJPMEEK_02157 3.3e-77 S SMI1-KNR4 cell-wall
PAJPMEEK_02158 3.9e-47 L A nuclease of the HNH/ENDO VII superfamily with conserved LHH
PAJPMEEK_02159 1.4e-249 yobL L A nuclease of the HNH/ENDO VII superfamily with conserved LHH
PAJPMEEK_02160 4.2e-53 csaA 6.1.1.10, 6.1.1.20, 6.1.1.6 J tRNA-binding protein
PAJPMEEK_02161 7.1e-135 yobQ K helix_turn_helix, arabinose operon control protein
PAJPMEEK_02162 1.1e-93 yobS K Transcriptional regulator
PAJPMEEK_02163 1.3e-136 yobT S COG0491 Zn-dependent hydrolases, including glyoxylases
PAJPMEEK_02164 2.3e-90 yobW
PAJPMEEK_02165 3.4e-55 czrA K transcriptional
PAJPMEEK_02166 5.5e-121 pvaA M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
PAJPMEEK_02167 9e-90 yozB S membrane
PAJPMEEK_02168 1.1e-139 yocB J Protein required for attachment to host cells
PAJPMEEK_02169 2.5e-94 yocC
PAJPMEEK_02170 1.4e-186 yocD 3.4.17.13 V peptidase S66
PAJPMEEK_02172 1e-114 yocH CBM50 M COG1388 FOG LysM repeat
PAJPMEEK_02173 0.0 recQ 3.6.4.12 L DNA helicase
PAJPMEEK_02174 2.8e-111 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PAJPMEEK_02176 9.5e-54 dksA T general stress protein
PAJPMEEK_02177 7.8e-10 yocL
PAJPMEEK_02178 1.7e-08
PAJPMEEK_02179 4.4e-88 yocM O Belongs to the small heat shock protein (HSP20) family
PAJPMEEK_02180 3.8e-44 yozN
PAJPMEEK_02181 8.5e-37 yocN
PAJPMEEK_02182 2.4e-56 yozO S Bacterial PH domain
PAJPMEEK_02184 1.6e-31 yozC
PAJPMEEK_02185 4.4e-288 dhaS 1.2.1.3, 1.2.1.39 C Belongs to the aldehyde dehydrogenase family
PAJPMEEK_02186 0.0 sqhC 4.2.1.137, 5.4.99.7 I COG1657 Squalene cyclase
PAJPMEEK_02187 1.4e-166 sodA 1.15.1.1 P Superoxide dismutase
PAJPMEEK_02188 3e-235 yocR S Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
PAJPMEEK_02189 4.6e-161 yocS S -transporter
PAJPMEEK_02190 2.8e-142 S Metallo-beta-lactamase superfamily
PAJPMEEK_02191 5.5e-183 sucB 2.3.1.61 C The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2)
PAJPMEEK_02192 0.0 sucA 1.2.4.2, 4.1.1.71 C The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components 2- oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3)
PAJPMEEK_02193 0.0 yojO P Von Willebrand factor
PAJPMEEK_02194 1.6e-163 yojN S ATPase family associated with various cellular activities (AAA)
PAJPMEEK_02195 2e-111 sodC 1.15.1.1 P Destroys radicals which are normally produced within the cells and which are toxic to biological systems
PAJPMEEK_02196 2.8e-227 sle1 3.5.1.28 CBM50 M COG1388 FOG LysM repeat
PAJPMEEK_02197 1.9e-225 yojK CG UDP-glucoronosyl and UDP-glucosyl transferase
PAJPMEEK_02198 7.4e-112 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PAJPMEEK_02200 1.4e-243 norM V Multidrug efflux pump
PAJPMEEK_02201 1.1e-150 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PAJPMEEK_02202 2.5e-126 yojG S deacetylase
PAJPMEEK_02203 9.7e-61 yojF S Protein of unknown function (DUF1806)
PAJPMEEK_02204 4.9e-23
PAJPMEEK_02205 9.2e-164 rarD S -transporter
PAJPMEEK_02206 1.3e-81 yozR S COG0071 Molecular chaperone (small heat shock protein)
PAJPMEEK_02208 2e-67 yodA S tautomerase
PAJPMEEK_02209 7.5e-20 yoaQ S Evidence 4 Homologs of previously reported genes of
PAJPMEEK_02210 1.4e-56 yodB K transcriptional
PAJPMEEK_02211 4.5e-106 yodC C nitroreductase
PAJPMEEK_02212 1.8e-110 mhqD S Carboxylesterase
PAJPMEEK_02213 2.4e-175 yodE E COG0346 Lactoylglutathione lyase and related lyases
PAJPMEEK_02214 1.4e-19 S Protein of unknown function (DUF3311)
PAJPMEEK_02215 3.5e-269 yodF E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PAJPMEEK_02216 2.2e-284 3.2.1.45 GH30 M Glycosyl hydrolase family 30 beta sandwich domain
PAJPMEEK_02217 2.3e-289 bglA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PAJPMEEK_02218 5.2e-133 yydK K Transcriptional regulator
PAJPMEEK_02219 4.6e-255 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
PAJPMEEK_02220 1.3e-128 yodH Q Methyltransferase
PAJPMEEK_02221 4.3e-34 yodI
PAJPMEEK_02222 1.8e-145 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
PAJPMEEK_02223 3.5e-126 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
PAJPMEEK_02225 8.6e-56 yodL S YodL-like
PAJPMEEK_02226 3.3e-104 yodM 3.6.1.27 I Acid phosphatase homologues
PAJPMEEK_02227 6.2e-24 yozD S YozD-like protein
PAJPMEEK_02229 1.7e-125 yodN
PAJPMEEK_02230 4.1e-36 yozE S Belongs to the UPF0346 family
PAJPMEEK_02231 1.4e-46 yokU S YokU-like protein, putative antitoxin
PAJPMEEK_02232 1.6e-279 kamA 5.4.3.2 E lysine 2,3-aminomutase
PAJPMEEK_02233 9.5e-158 yodP 2.3.1.264 K Acetyltransferase (GNAT) family
PAJPMEEK_02234 6.2e-254 yodQ 3.5.1.16 E Acetylornithine deacetylase
PAJPMEEK_02235 6.1e-123 scoB 2.8.3.5, 2.8.3.8, 2.8.3.9 I COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
PAJPMEEK_02236 1.7e-125 yodS 2.8.3.8, 2.8.3.9 I COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
PAJPMEEK_02237 1.7e-246 yodT H Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PAJPMEEK_02238 3.5e-63 yosT L Bacterial transcription activator, effector binding domain
PAJPMEEK_02240 3.7e-145 yiiD K acetyltransferase
PAJPMEEK_02241 1.3e-248 cgeD M maturation of the outermost layer of the spore
PAJPMEEK_02242 1.1e-41 cgeC
PAJPMEEK_02243 9.8e-55 cgeA
PAJPMEEK_02244 2.7e-182 cgeB S Spore maturation protein
PAJPMEEK_02245 4.4e-219 phy 3.1.3.8 I Myo-inositol-hexaphosphate 3-phosphohydrolase
PAJPMEEK_02246 7.9e-73 4.2.1.115 GM Polysaccharide biosynthesis protein
PAJPMEEK_02250 7.6e-78
PAJPMEEK_02251 2.6e-08
PAJPMEEK_02255 2.1e-16 yoqH M LysM domain
PAJPMEEK_02256 3.6e-17 yoqH M LysM domain
PAJPMEEK_02257 1.6e-138 S aspartate phosphatase
PAJPMEEK_02258 7.5e-50 S aspartate phosphatase
PAJPMEEK_02260 7.4e-10 gabD_2 1.2.1.9 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PAJPMEEK_02261 5.7e-63
PAJPMEEK_02262 3e-62 S SMI1-KNR4 cell-wall
PAJPMEEK_02263 1.3e-35 yobL S A nuclease of the HNH/ENDO VII superfamily with conserved LHH
PAJPMEEK_02264 4.9e-167 yobL L A nuclease of the HNH/ENDO VII superfamily with conserved LHH
PAJPMEEK_02265 4.2e-09 L Belongs to the 'phage' integrase family
PAJPMEEK_02267 1.3e-39 K Putative DNA-binding domain
PAJPMEEK_02268 8.9e-14 S Protein of unknown function (DUF4236)
PAJPMEEK_02273 1.4e-69 yoaW
PAJPMEEK_02275 1.7e-08
PAJPMEEK_02278 9.6e-195 S aspartate phosphatase
PAJPMEEK_02280 2e-159 3.4.24.40 S amine dehydrogenase activity
PAJPMEEK_02284 1.1e-24
PAJPMEEK_02285 1.2e-09 S Acetyltransferase (GNAT) domain
PAJPMEEK_02286 1.5e-85 yokK S SMI1 / KNR4 family
PAJPMEEK_02287 2e-207 yobL L A nuclease of the HNH/ENDO VII superfamily with conserved LHH
PAJPMEEK_02288 7.3e-84 G SMI1-KNR4 cell-wall
PAJPMEEK_02289 2.3e-75 yokF 3.1.31.1 L RNA catabolic process
PAJPMEEK_02290 8.1e-307 yokA L Recombinase
PAJPMEEK_02291 2.3e-104 4.2.1.115 GM Polysaccharide biosynthesis protein
PAJPMEEK_02292 1.2e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PAJPMEEK_02293 2.7e-102 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PAJPMEEK_02294 1.4e-66 ypoP K transcriptional
PAJPMEEK_02295 5.5e-98 ypmS S protein conserved in bacteria
PAJPMEEK_02296 8.9e-136 ypmR E GDSL-like Lipase/Acylhydrolase
PAJPMEEK_02297 4.6e-108 ypmQ S protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems
PAJPMEEK_02298 2.6e-39 ypmP S Protein of unknown function (DUF2535)
PAJPMEEK_02299 3.7e-243 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PAJPMEEK_02300 3.5e-180 pspF K Transcriptional regulator
PAJPMEEK_02301 9.3e-110 hlyIII S protein, Hemolysin III
PAJPMEEK_02302 4.2e-115 ypkP 2.3.1.40, 2.3.1.51, 6.2.1.20 I Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
PAJPMEEK_02303 1.3e-90 folA 1.1.1.262, 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PAJPMEEK_02304 5.6e-157 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PAJPMEEK_02305 1e-113 ypjP S YpjP-like protein
PAJPMEEK_02306 5.2e-131 ypiP 2.1.1.242 AJ Putative SAM-dependent methyltransferase
PAJPMEEK_02307 1e-75 yphP S Belongs to the UPF0403 family
PAJPMEEK_02308 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
PAJPMEEK_02309 1.2e-157 ypgR C COG0694 Thioredoxin-like proteins and domains
PAJPMEEK_02310 1.8e-99 ypgQ S phosphohydrolase
PAJPMEEK_02311 1.3e-87 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
PAJPMEEK_02312 1.1e-177 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PAJPMEEK_02313 1.7e-215 ugtP 2.4.1.315 GT28 M Processive glucosyltransferase involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. Is able to successively transfer up to three glucosyl residues to diacylglycerol (DAG), thereby catalyzing the formation of beta-monoglucosyl-DAG (3-O-(beta-D-glucopyranosyl)-1,2-diacyl- sn-glycerol), beta-diglucosyl-DAG (3-O-(beta-D-glucopyranosyl- beta-(1- 6)-D-glucopyranosyl)-1,2-diacyl-sn-glycerol) and beta- triglucosyl-DAG (3-O-(beta-D-glucopyranosyl-beta-(1- 6)-D- glucopyranosyl-beta-(1- 6)-D-glucopyranosyl)-1,2-diacyl-sn- glycerol). Beta-diglucosyl-DAG is the predominant glycolipid found in Bacillales and is also used as a membrane anchor for lipoteichoic acid (LTA)
PAJPMEEK_02314 1e-30 cspD K Cold-shock protein
PAJPMEEK_02315 3.3e-12 degR
PAJPMEEK_02316 1.2e-36 S Protein of unknown function (DUF2564)
PAJPMEEK_02317 5.7e-28 ypeQ S Zinc-finger
PAJPMEEK_02318 1.2e-123 ypeP 3.1.26.4 L COG0328 Ribonuclease HI
PAJPMEEK_02319 3.1e-119 ypdP S Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
PAJPMEEK_02320 1.7e-66 rnhA 3.1.26.4 L Ribonuclease
PAJPMEEK_02322 3.1e-164 polA 2.7.7.7 L 5'3' exonuclease
PAJPMEEK_02324 3.5e-39 ypbS S Protein of unknown function (DUF2533)
PAJPMEEK_02325 0.0 ypbR S Dynamin family
PAJPMEEK_02326 4.2e-89 ypbQ S protein conserved in bacteria
PAJPMEEK_02327 5.9e-205 bcsA Q Naringenin-chalcone synthase
PAJPMEEK_02328 3.1e-107 J Acetyltransferase (GNAT) domain
PAJPMEEK_02329 6.2e-51 ybaZ 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
PAJPMEEK_02330 1.5e-08 S Bacillus cereus group antimicrobial protein
PAJPMEEK_02331 1.5e-98 ydfR S Protein of unknown function (DUF421)
PAJPMEEK_02332 4.1e-101 yrdC 3.5.1.19 Q Isochorismatase family
PAJPMEEK_02334 1.6e-233 pbuX F xanthine
PAJPMEEK_02335 8.8e-99 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PAJPMEEK_02336 1.6e-293 ypwA 3.4.17.19 E Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
PAJPMEEK_02337 0.0 ypvA 3.6.4.12 KL COG1199 Rad3-related DNA helicases
PAJPMEEK_02339 1.9e-21 S YpzG-like protein
PAJPMEEK_02340 1.9e-217 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PAJPMEEK_02341 3.4e-46 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PAJPMEEK_02342 1.7e-99 ypsA S Belongs to the UPF0398 family
PAJPMEEK_02343 9.9e-33 cotD S Inner spore coat protein D
PAJPMEEK_02344 7.8e-238 yprB L RNase_H superfamily
PAJPMEEK_02345 4.1e-83 yprA L COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster
PAJPMEEK_02346 2.1e-22
PAJPMEEK_02350 1.5e-38
PAJPMEEK_02351 3e-92 ftsK D FtsK/SpoIIIE family
PAJPMEEK_02353 7.7e-08 K Cro/C1-type HTH DNA-binding domain
PAJPMEEK_02355 7.1e-70 S Tetratricopeptide repeat
PAJPMEEK_02356 2.8e-79 K Helix-turn-helix domain
PAJPMEEK_02357 6.5e-09 K Helix-turn-helix XRE-family like proteins
PAJPMEEK_02358 6.5e-14 S YolD-like protein
PAJPMEEK_02360 6.7e-33 S Domain of unknown function (DUF4917)
PAJPMEEK_02361 3.7e-161 A Pre-toxin TG
PAJPMEEK_02362 7.6e-24
PAJPMEEK_02363 1.2e-110 xlyA 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
PAJPMEEK_02364 8.7e-30 xhlB S SPP1 phage holin
PAJPMEEK_02367 1.2e-11
PAJPMEEK_02368 8.5e-70
PAJPMEEK_02369 0.0 S Peptidase_G2, IMC autoproteolytic cleavage domain
PAJPMEEK_02370 2.1e-179 L Prophage endopeptidase tail
PAJPMEEK_02371 4e-105 S Phage tail protein
PAJPMEEK_02372 2.8e-106 S Phage-related minor tail protein
PAJPMEEK_02373 5.8e-26
PAJPMEEK_02374 8.1e-82 N phage major tail protein, phi13 family
PAJPMEEK_02375 2.6e-26
PAJPMEEK_02377 2.2e-33 S Phage head-tail joining protein
PAJPMEEK_02378 2.6e-15 S Phage gp6-like head-tail connector protein
PAJPMEEK_02379 5.6e-129 S Phage capsid family
PAJPMEEK_02380 1.4e-88 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
PAJPMEEK_02381 1.6e-124 S Phage portal protein
PAJPMEEK_02382 7.4e-231 L Terminase
PAJPMEEK_02383 8.4e-27 L Phage terminase, small subunit
PAJPMEEK_02384 3e-23
PAJPMEEK_02386 1.1e-13
PAJPMEEK_02387 1e-25 S Terminase
PAJPMEEK_02391 4.9e-26
PAJPMEEK_02392 4.3e-115 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PAJPMEEK_02393 2.1e-175 M Parallel beta-helix repeats
PAJPMEEK_02394 4.5e-88 S Pfam:DUF867
PAJPMEEK_02398 1e-22
PAJPMEEK_02403 1.4e-08 S YopX protein
PAJPMEEK_02410 5e-28 S Domain of unknown function (DUF5052)
PAJPMEEK_02411 1.7e-12
PAJPMEEK_02413 1.6e-11 L DnaD domain protein
PAJPMEEK_02414 1.5e-184 dcm 2.1.1.37 H C-5 cytosine-specific DNA methylase
PAJPMEEK_02419 2.2e-22
PAJPMEEK_02420 6.8e-286 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PAJPMEEK_02421 3.2e-15 K Sigma-70 region 2
PAJPMEEK_02423 0.0 L DNA primase activity
PAJPMEEK_02425 6.8e-22
PAJPMEEK_02426 2.7e-209 ttrA1 L Type III restriction protein res subunit
PAJPMEEK_02430 7.9e-08 dnaN 2.7.7.7 L DNA-directed DNA polymerase activity
PAJPMEEK_02433 2.1e-100 L Calcineurin-like phosphoesterase superfamily domain
PAJPMEEK_02435 9.6e-75 L DNA recombination
PAJPMEEK_02437 6.3e-82 CP_0646 L AAA domain
PAJPMEEK_02438 7e-11
PAJPMEEK_02439 4.6e-13 K Helix-turn-helix XRE-family like proteins
PAJPMEEK_02440 5.7e-09 K Helix-turn-helix XRE-family like proteins
PAJPMEEK_02441 1.9e-179 L recombinase activity
PAJPMEEK_02442 0.0 yprA L COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster
PAJPMEEK_02443 2.7e-88 ypqE 2.7.1.199 G COG2190 Phosphotransferase system IIA components
PAJPMEEK_02444 1.7e-72 hspX O Belongs to the small heat shock protein (HSP20) family
PAJPMEEK_02445 5.6e-50 yppG S YppG-like protein
PAJPMEEK_02447 2e-11 yppE S Bacterial domain of unknown function (DUF1798)
PAJPMEEK_02450 2.6e-188 yppC S Protein of unknown function (DUF2515)
PAJPMEEK_02451 2.7e-111 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PAJPMEEK_02452 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PAJPMEEK_02453 2.8e-90 ypoC
PAJPMEEK_02454 4.9e-122 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PAJPMEEK_02455 3e-130 dnaD L DNA replication protein DnaD
PAJPMEEK_02456 2e-252 asnS 6.1.1.22 J asparaginyl-tRNA
PAJPMEEK_02457 3.3e-222 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
PAJPMEEK_02458 4.5e-80 ypmB S protein conserved in bacteria
PAJPMEEK_02459 6.7e-23 ypmA S Protein of unknown function (DUF4264)
PAJPMEEK_02460 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PAJPMEEK_02461 6e-64 panD 4.1.1.11 H Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
PAJPMEEK_02462 3.2e-158 panC 2.7.4.25, 6.3.2.1 H Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
PAJPMEEK_02463 2.2e-151 panB 2.1.2.11 H Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
PAJPMEEK_02464 1.6e-182 birA 6.3.4.15 K Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PAJPMEEK_02465 1.2e-219 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PAJPMEEK_02466 1.8e-209 bshA GT4 M N-acetyl-alpha-D-glucosaminyl L-malate synthase
PAJPMEEK_02467 2.8e-131 bshB1 S proteins, LmbE homologs
PAJPMEEK_02468 1.4e-71 mgsA 2.7.1.24, 4.2.3.3 G methylglyoxal synthase
PAJPMEEK_02469 2e-146 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PAJPMEEK_02470 1.8e-56 ypjD 2.5.1.19 S Nucleotide pyrophosphohydrolase
PAJPMEEK_02471 3.6e-157 ypjC S Uncharacterized protein conserved in bacteria (DUF2179)
PAJPMEEK_02472 9e-228 oxdC 4.1.1.2 G Oxalate decarboxylase
PAJPMEEK_02473 5.1e-142 ypjB S sporulation protein
PAJPMEEK_02474 1.1e-113 ypjA S membrane
PAJPMEEK_02475 3.9e-147 qcrC C Menaquinol-cytochrome c reductase cytochrome b c subunit
PAJPMEEK_02476 6.7e-127 petB C COG1290 Cytochrome b subunit of the bc complex
PAJPMEEK_02477 9.3e-97 qcrA C Menaquinol-cytochrome c reductase
PAJPMEEK_02478 8.5e-78 ypiF S Protein of unknown function (DUF2487)
PAJPMEEK_02479 2.1e-99 ypiB S Belongs to the UPF0302 family
PAJPMEEK_02480 7.7e-233 S COG0457 FOG TPR repeat
PAJPMEEK_02481 6.8e-134 L Molecular Function DNA binding, Biological Process DNA recombination
PAJPMEEK_02482 1.1e-40 L transposase activity
PAJPMEEK_02483 1.7e-235 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PAJPMEEK_02484 9.2e-206 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
PAJPMEEK_02485 3.8e-204 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PAJPMEEK_02486 2.5e-144 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PAJPMEEK_02487 1.4e-228 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PAJPMEEK_02488 2.4e-121 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E Belongs to the TrpF family
PAJPMEEK_02489 1e-131 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
PAJPMEEK_02490 4.1e-160 trpD 2.4.2.18, 4.1.3.27 E Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PAJPMEEK_02491 1.6e-293 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PAJPMEEK_02492 2.4e-60 aroH 2.7.4.25, 5.4.99.5 E Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis
PAJPMEEK_02493 4.9e-204 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PAJPMEEK_02494 9.4e-217 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PAJPMEEK_02495 4.5e-142 cheR 2.1.1.80 NT COG1352 Methylase of chemotaxis methyl-accepting proteins
PAJPMEEK_02496 5.4e-80 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
PAJPMEEK_02497 1.4e-195 hepT 2.5.1.30, 2.5.1.83, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PAJPMEEK_02498 1.2e-131 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PAJPMEEK_02499 1.6e-137 hepS 2.5.1.30 H Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
PAJPMEEK_02500 1.3e-34 mtrB K Required for transcription attenuation control in the Trp operon. This trans-acting factor seems to recognize a 10 bases nucleotide sequence in the Trp leader transcript causing transcription termination. Binds the leader RNA only in presence of L-tryptophan
PAJPMEEK_02501 5.4e-101 folE 3.5.4.16 H GTP cyclohydrolase
PAJPMEEK_02502 4.7e-42 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PAJPMEEK_02503 2.2e-279 spoIVA S ATPase. Has a role at an early stage in the morphogenesis of the spore coat
PAJPMEEK_02504 4e-133 yphF
PAJPMEEK_02505 1.5e-16 yphE S Protein of unknown function (DUF2768)
PAJPMEEK_02506 5.1e-190 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PAJPMEEK_02507 4.6e-249 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PAJPMEEK_02508 3.6e-103 yphA
PAJPMEEK_02509 4.7e-08 S YpzI-like protein
PAJPMEEK_02510 1.2e-186 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PAJPMEEK_02511 1.5e-206 rpsA 1.17.7.4 J Ribosomal protein S1
PAJPMEEK_02512 2.1e-112 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PAJPMEEK_02513 1.4e-12 S Family of unknown function (DUF5359)
PAJPMEEK_02514 2.5e-62 ypfA M Flagellar protein YcgR
PAJPMEEK_02515 4.2e-253 hemX 2.1.1.107, 4.2.1.75 H sporulation protein
PAJPMEEK_02516 4.9e-162 sleB 3.5.1.28 M Spore cortex-lytic enzyme
PAJPMEEK_02517 4.1e-121 prsW S Involved in the degradation of specific anti-sigma factors
PAJPMEEK_02518 9e-189 ypdA 1.18.1.2, 1.19.1.1, 1.8.1.9 O COG0492 Thioredoxin reductase
PAJPMEEK_02519 1.4e-245 gudB 1.4.1.2, 1.4.1.3 E Belongs to the Glu Leu Phe Val dehydrogenases family
PAJPMEEK_02520 2e-106 mecB NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
PAJPMEEK_02521 4.8e-148 ypbG S Calcineurin-like phosphoesterase superfamily domain
PAJPMEEK_02522 5.7e-85 ypbF S Protein of unknown function (DUF2663)
PAJPMEEK_02523 3.2e-80 ypbE M Lysin motif
PAJPMEEK_02524 1.3e-99 ypbD S metal-dependent membrane protease
PAJPMEEK_02525 1.9e-272 recQ 3.6.4.12 L DNA helicase
PAJPMEEK_02526 2.7e-199 ypbB 5.1.3.1 S protein conserved in bacteria
PAJPMEEK_02527 3.6e-41 fer C Ferredoxin
PAJPMEEK_02528 1.6e-92 fmnP U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PAJPMEEK_02529 7.5e-294 serA 1.1.1.399, 1.1.1.95 E Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAJPMEEK_02530 4e-193 rsiX
PAJPMEEK_02531 9.1e-104 sigX K Belongs to the sigma-70 factor family. ECF subfamily
PAJPMEEK_02532 0.0 resE 2.7.13.3 T Histidine kinase
PAJPMEEK_02533 8.8e-133 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAJPMEEK_02534 1.9e-193 ccsA O 'COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component'
PAJPMEEK_02535 0.0 ccs1 O COG1333 ResB protein required for cytochrome c biosynthesis
PAJPMEEK_02536 4.3e-100 resA CO Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c
PAJPMEEK_02537 7.6e-132 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PAJPMEEK_02538 1.3e-88 spmB S Spore maturation protein
PAJPMEEK_02539 2e-103 spmA S Spore maturation protein
PAJPMEEK_02540 4.3e-214 dacB 3.4.16.4 M Belongs to the peptidase S11 family
PAJPMEEK_02541 5e-93 ypuI S Protein of unknown function (DUF3907)
PAJPMEEK_02542 7.8e-103 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PAJPMEEK_02543 2.1e-129 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PAJPMEEK_02545 1.1e-92 ypuF S Domain of unknown function (DUF309)
PAJPMEEK_02546 1.3e-63 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PAJPMEEK_02547 3.3e-80 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PAJPMEEK_02548 1.9e-228 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PAJPMEEK_02549 1e-111 ribE 2.5.1.9 H Riboflavin synthase
PAJPMEEK_02550 7.3e-211 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PAJPMEEK_02551 1.7e-49 ypuD
PAJPMEEK_02552 6.9e-101 sipT 3.4.21.89 U Belongs to the peptidase S26 family
PAJPMEEK_02553 3.1e-81 ccdC1 O Protein of unknown function (DUF1453)
PAJPMEEK_02554 4.4e-79 ppiB 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PAJPMEEK_02555 5.1e-154 ypuA S Secreted protein
PAJPMEEK_02556 1e-256 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PAJPMEEK_02557 1.4e-270 spoVAF EG Stage V sporulation protein AF
PAJPMEEK_02558 1.8e-110 spoVAEA S stage V sporulation protein
PAJPMEEK_02559 2.5e-56 spoVAEB S stage V sporulation protein
PAJPMEEK_02560 8.4e-190 spoVAD I Stage V sporulation protein AD
PAJPMEEK_02561 6e-79 spoVAC S stage V sporulation protein AC
PAJPMEEK_02562 6.7e-52 spoVAB S Stage V sporulation protein AB
PAJPMEEK_02563 3.7e-111 spoVAA S Stage V sporulation protein AA
PAJPMEEK_02564 1.5e-135 sigF K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PAJPMEEK_02565 1.8e-75 spoIIAB 2.7.11.1 F Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti-anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition
PAJPMEEK_02566 7.8e-58 spoIIAA T Belongs to the anti-sigma-factor antagonist family
PAJPMEEK_02567 4.1e-212 dacF 3.4.16.4 M Belongs to the peptidase S11 family
PAJPMEEK_02568 4.5e-149 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
PAJPMEEK_02569 3e-231 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
PAJPMEEK_02570 3.7e-165 xerD L recombinase XerD
PAJPMEEK_02571 3.7e-37 S Protein of unknown function (DUF4227)
PAJPMEEK_02572 1.9e-80 fur P Belongs to the Fur family
PAJPMEEK_02573 5.5e-110 spoIIM S Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane
PAJPMEEK_02575 1.7e-34 yqkK
PAJPMEEK_02576 5.7e-22
PAJPMEEK_02577 2.2e-243 mleA 1.1.1.38 C malic enzyme
PAJPMEEK_02578 4.2e-240 mleN C Na H antiporter
PAJPMEEK_02579 1.3e-268 aspA 4.2.1.2, 4.3.1.1 E Aspartate ammonia-lyase
PAJPMEEK_02580 2.9e-187 ansA 3.5.1.1 EJ L-asparaginase
PAJPMEEK_02581 6e-58 ansR K Transcriptional regulator
PAJPMEEK_02582 1e-223 yqxK 3.6.4.12 L DNA helicase
PAJPMEEK_02583 1.6e-94 nudF 3.6.1.13 L Belongs to the Nudix hydrolase family
PAJPMEEK_02585 2.2e-168 yqkF C oxidoreductases (related to aryl-alcohol dehydrogenases)
PAJPMEEK_02587 3.3e-177 yqkD S COG1073 Hydrolases of the alpha beta superfamily
PAJPMEEK_02588 3.2e-39 yqkC S Protein of unknown function (DUF2552)
PAJPMEEK_02589 1.7e-60 yqkB S Belongs to the HesB IscA family
PAJPMEEK_02590 1.9e-175 yqkA K GrpB protein
PAJPMEEK_02591 7.3e-61 yqjZ 2.3.1.128, 2.5.1.18 S enzyme involved in biosynthesis of extracellular polysaccharides
PAJPMEEK_02592 4.3e-88 yqjY K acetyltransferase
PAJPMEEK_02593 6.1e-235 polYB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PAJPMEEK_02594 9.9e-58 S YolD-like protein
PAJPMEEK_02596 6.2e-191 yueF S transporter activity
PAJPMEEK_02598 6.6e-74 yqjT 3.1.26.4 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PAJPMEEK_02599 2e-177 coaA 2.7.1.33 F Pantothenic acid kinase
PAJPMEEK_02600 2.8e-257 dsdA 4.3.1.18 E Belongs to the serine threonine dehydratase family. DsdA subfamily
PAJPMEEK_02601 1.3e-142 yqjQ S Belongs to the short-chain dehydrogenases reductases (SDR) family
PAJPMEEK_02602 8.6e-176 yqjP S COG0491 Zn-dependent hydrolases, including glyoxylases
PAJPMEEK_02603 2.1e-146 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PAJPMEEK_02604 4e-136 pksI I Belongs to the enoyl-CoA hydratase isomerase family
PAJPMEEK_02605 4.2e-239 pksG 2.3.3.10 I synthase
PAJPMEEK_02606 3.7e-218 eryK 1.14.13.154 C Cytochrome P450
PAJPMEEK_02607 0.0 pks13 1.6.5.5 C COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases
PAJPMEEK_02608 0.0 Q Polyketide synthase of type I
PAJPMEEK_02609 0.0 pfaA Q Polyketide synthase of type I
PAJPMEEK_02610 0.0 pksJ Q Polyketide synthase of type I
PAJPMEEK_02611 0.0 Q Polyketide synthase of type I
PAJPMEEK_02612 0.0 1.1.1.320 Q Polyketide synthase of type I
PAJPMEEK_02613 0.0 pksJ Q Polyketide synthase of type I
PAJPMEEK_02614 3.5e-129 IQ reductase
PAJPMEEK_02615 3.5e-247 IQ COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
PAJPMEEK_02618 0.0 fabD 1.13.12.16, 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
PAJPMEEK_02619 1.6e-94 nusG K Participates in transcription elongation, termination and antitermination
PAJPMEEK_02620 2.6e-163 K LysR substrate binding domain
PAJPMEEK_02621 1.1e-50 S GlpM protein
PAJPMEEK_02622 1.6e-193 namA 1.6.99.1 C Catalyzes the reduction of the double bond of an array of alpha,beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes
PAJPMEEK_02623 3e-147 yqjL S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
PAJPMEEK_02624 4e-170 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PAJPMEEK_02625 6.1e-290 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PAJPMEEK_02626 3.4e-266 gnd 1.1.1.343, 1.1.1.44 G Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PAJPMEEK_02627 3.9e-237 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PAJPMEEK_02628 2.4e-25 yqzJ
PAJPMEEK_02629 6e-149 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PAJPMEEK_02630 1.4e-201 yqjE 3.4.11.4 E COG2195 Di- and tripeptidases
PAJPMEEK_02631 1.1e-289 mmdA 2.1.3.15, 6.4.1.3 I COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PAJPMEEK_02632 1.1e-74 mce 4.4.1.5, 5.1.99.1, 5.4.99.2 E COG0346 Lactoylglutathione lyase and related lyases
PAJPMEEK_02634 1.4e-95 yqjB S protein conserved in bacteria
PAJPMEEK_02635 6.3e-171 yqjA S Putative aromatic acid exporter C-terminal domain
PAJPMEEK_02636 6.5e-128 artM 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
PAJPMEEK_02637 3.8e-106 artQ E COG0765 ABC-type amino acid transport system, permease component
PAJPMEEK_02638 9e-136 artP ET Belongs to the bacterial solute-binding protein 3 family
PAJPMEEK_02639 1e-75 yqiW S Belongs to the UPF0403 family
PAJPMEEK_02640 1.2e-171 yegS 2.7.1.107 I COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
PAJPMEEK_02641 4.7e-206 bfmBB 2.3.1.168, 2.3.1.61 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PAJPMEEK_02642 4.6e-185 bfmBAB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PAJPMEEK_02643 8.6e-163 bfmBAA 1.2.4.4 C COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PAJPMEEK_02644 4.1e-267 lpdA 1.8.1.4 C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PAJPMEEK_02645 2e-208 buk 2.7.2.7 C Belongs to the acetokinase family
PAJPMEEK_02646 1.2e-205 ldh 1.4.1.9 E Belongs to the Glu Leu Phe Val dehydrogenases family
PAJPMEEK_02647 4.7e-152 pta 2.3.1.19, 2.3.1.8 C phosphate butyryltransferase
PAJPMEEK_02648 0.0 bkdR 2.7.13.3 KT Transcriptional regulator
PAJPMEEK_02649 3.2e-34 yqzF S Protein of unknown function (DUF2627)
PAJPMEEK_02650 1.6e-160 prpB 4.1.3.30 G Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
PAJPMEEK_02651 5.2e-278 prpD 4.2.1.79 S 2-methylcitrate dehydratase
PAJPMEEK_02652 1.7e-207 prpC 2.3.3.1, 2.3.3.5 C Belongs to the citrate synthase family
PAJPMEEK_02653 2.2e-207 mmgC I acyl-CoA dehydrogenase
PAJPMEEK_02654 3.7e-154 hbdA 1.1.1.157 I Dehydrogenase
PAJPMEEK_02655 6.3e-213 mmgA 2.3.1.9 I Belongs to the thiolase family
PAJPMEEK_02656 5.1e-136 yqiK 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PAJPMEEK_02657 6.7e-105 amiC 3.5.1.28 M Cell wall hydrolase autolysin
PAJPMEEK_02658 2.5e-17
PAJPMEEK_02659 1.5e-101 ytaF P Probably functions as a manganese efflux pump
PAJPMEEK_02660 1.8e-113 K Protein of unknown function (DUF1232)
PAJPMEEK_02662 1.4e-214 yqiG C COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family
PAJPMEEK_02665 2.7e-216 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PAJPMEEK_02666 3.2e-144 KT May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process
PAJPMEEK_02667 9.5e-239 rseP 3.4.21.116 M Stage IV sporulation protein B
PAJPMEEK_02668 1.2e-305 recN L May be involved in recombinational repair of damaged DNA
PAJPMEEK_02669 3.9e-78 argR K Regulates arginine biosynthesis genes
PAJPMEEK_02670 8.7e-156 rrmJ 2.1.1.226, 2.1.1.227 J rRNA methylase
PAJPMEEK_02671 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PAJPMEEK_02672 6.8e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PAJPMEEK_02673 2e-39 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAJPMEEK_02674 3.5e-244 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PAJPMEEK_02675 1.1e-155 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PAJPMEEK_02676 1.1e-65 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PAJPMEEK_02677 8.1e-67 yqhY S protein conserved in bacteria
PAJPMEEK_02678 1.2e-255 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
PAJPMEEK_02679 4.9e-63 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PAJPMEEK_02680 2.5e-62 spoIIIAH S SpoIIIAH-like protein
PAJPMEEK_02681 7.7e-118 spoIIIAG S stage III sporulation protein AG
PAJPMEEK_02682 7.6e-101 spoIIIAF S Stage III sporulation protein AF (Spore_III_AF)
PAJPMEEK_02683 6.3e-200 spoIIIAE S stage III sporulation protein AE
PAJPMEEK_02684 2.5e-41 spoIIIAD S Stage III sporulation protein AD
PAJPMEEK_02685 7.6e-29 spoIIIAC S stage III sporulation protein AC
PAJPMEEK_02686 1.7e-85 spoIIIAB S Stage III sporulation protein
PAJPMEEK_02687 4.2e-172 spoIIIAA S stage III sporulation protein AA
PAJPMEEK_02688 1.8e-36 yqhV S Protein of unknown function (DUF2619)
PAJPMEEK_02689 5.4e-98 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PAJPMEEK_02690 3.3e-176 yqhT 3.4.11.9, 3.4.13.9 E COG0006 Xaa-Pro aminopeptidase
PAJPMEEK_02691 3.7e-88 yqhR S Conserved membrane protein YqhR
PAJPMEEK_02692 1e-173 yqhQ S Protein of unknown function (DUF1385)
PAJPMEEK_02693 5.8e-62 yqhP
PAJPMEEK_02694 1.1e-164 yqhO S esterase of the alpha-beta hydrolase superfamily
PAJPMEEK_02695 2.7e-73 mntR K Involved in manganese homeostasis. Might activate the transcription of the mntABCD operon
PAJPMEEK_02696 1.3e-159 lipM 6.3.1.20 H Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation
PAJPMEEK_02697 2.7e-64 yqhL P COG0607 Rhodanese-related sulfurtransferase
PAJPMEEK_02698 1.5e-288 gcvPB 1.4.4.2 E The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PAJPMEEK_02699 7.1e-253 gcvPA 1.4.4.2 E The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PAJPMEEK_02700 2e-208 gcvT 1.4.4.2, 2.1.2.10 E The glycine cleavage system catalyzes the degradation of glycine
PAJPMEEK_02701 0.0 yqhH L COG0553 Superfamily II DNA RNA helicases, SNF2 family
PAJPMEEK_02702 3.2e-152 yqhG S Bacterial protein YqhG of unknown function
PAJPMEEK_02703 5.2e-23 sinI S Anti-repressor SinI
PAJPMEEK_02704 7.8e-55 sinR K transcriptional
PAJPMEEK_02705 3.3e-141 tasA S Cell division protein FtsN
PAJPMEEK_02706 1e-70 sipW 3.4.21.89 U Signal peptidase
PAJPMEEK_02707 6.7e-119 yqxM
PAJPMEEK_02708 1.3e-54 yqzG S Protein of unknown function (DUF3889)
PAJPMEEK_02709 2.3e-26 yqzE S YqzE-like protein
PAJPMEEK_02710 2.3e-63 S ComG operon protein 7
PAJPMEEK_02711 1.2e-67 comGF U Putative Competence protein ComGF
PAJPMEEK_02712 4.5e-20 comGE
PAJPMEEK_02713 1.1e-72 gspH NU Tfp pilus assembly protein FimT
PAJPMEEK_02714 8.9e-50 comGC U Required for transformation and DNA binding
PAJPMEEK_02715 1.3e-182 comGB NU COG1459 Type II secretory pathway, component PulF
PAJPMEEK_02716 2.5e-200 comGA NU COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
PAJPMEEK_02717 4.1e-186 corA P Mg2 transporter protein
PAJPMEEK_02718 3.3e-239 corC1 S COG1253 Hemolysins and related proteins containing CBS domains
PAJPMEEK_02719 7e-150 yqhA T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PAJPMEEK_02721 9.2e-65 yqgZ 1.20.4.1 P Belongs to the ArsC family
PAJPMEEK_02722 3.1e-37 yqgY S Protein of unknown function (DUF2626)
PAJPMEEK_02723 8.1e-122 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
PAJPMEEK_02724 5.4e-20 yqgW S Protein of unknown function (DUF2759)
PAJPMEEK_02725 6.9e-50 yqgV S Thiamine-binding protein
PAJPMEEK_02726 9.2e-200 yqgU
PAJPMEEK_02727 2.7e-221 yqgT 3.4.19.11 E Gamma-D-glutamyl-L-diamino acid endopeptidase
PAJPMEEK_02728 2.2e-179 glcK 2.7.1.2 G Glucokinase
PAJPMEEK_02729 1.8e-213 nhaC C Na H antiporter
PAJPMEEK_02730 4e-07 yqgO
PAJPMEEK_02731 2.4e-98 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PAJPMEEK_02732 9.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PAJPMEEK_02733 1.2e-50 yqzD
PAJPMEEK_02734 3.7e-76 yqzC S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PAJPMEEK_02735 7.5e-146 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAJPMEEK_02736 8.6e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PAJPMEEK_02737 2.4e-156 pstA P Phosphate transport system permease
PAJPMEEK_02738 3.2e-159 pstC P probably responsible for the translocation of the substrate across the membrane
PAJPMEEK_02739 1.7e-157 pstS P Phosphate
PAJPMEEK_02740 0.0 pbpA 3.4.16.4 M penicillin-binding protein
PAJPMEEK_02741 2e-228 yqgE EGP Major facilitator superfamily
PAJPMEEK_02742 4.1e-115 sodA 1.15.1.1 P radicals which are normally produced within the cells and which are toxic to biological systems
PAJPMEEK_02743 3e-76 yqgC S protein conserved in bacteria
PAJPMEEK_02744 8.7e-131 yqgB S Protein of unknown function (DUF1189)
PAJPMEEK_02745 3.7e-48 yqfZ M LysM domain
PAJPMEEK_02746 3.1e-201 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PAJPMEEK_02747 2.3e-52 yqfX S membrane
PAJPMEEK_02748 6.5e-110 yqfW S Belongs to the 5'(3')-deoxyribonucleotidase family
PAJPMEEK_02749 2.9e-72 zur P Belongs to the Fur family
PAJPMEEK_02750 1.4e-156 yqfU S Uncharacterized protein conserved in bacteria (DUF2179)
PAJPMEEK_02751 9.3e-37 yqfT S Protein of unknown function (DUF2624)
PAJPMEEK_02752 2e-166 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PAJPMEEK_02753 1.2e-247 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PAJPMEEK_02754 6.2e-51 yqfQ S YqfQ-like protein
PAJPMEEK_02755 1.7e-176 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PAJPMEEK_02756 2.5e-211 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PAJPMEEK_02757 5.8e-127 trmK 2.1.1.217 S SAM-dependent methyltransferase
PAJPMEEK_02758 1.1e-62 cccA C COG2010 Cytochrome c, mono- and diheme variants
PAJPMEEK_02759 2.4e-201 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PAJPMEEK_02760 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PAJPMEEK_02761 6.1e-88 yaiI S Belongs to the UPF0178 family
PAJPMEEK_02762 2e-149 yqfL 2.7.11.33, 2.7.4.28 S Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PAJPMEEK_02763 4.5e-112 ccpN K CBS domain
PAJPMEEK_02764 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PAJPMEEK_02765 5.1e-175 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PAJPMEEK_02766 7.6e-143 recO L Involved in DNA repair and RecF pathway recombination
PAJPMEEK_02767 1.8e-16 S YqzL-like protein
PAJPMEEK_02768 4e-167 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PAJPMEEK_02769 7.1e-71 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PAJPMEEK_02770 4.6e-64 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
PAJPMEEK_02771 2.5e-80 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PAJPMEEK_02772 0.0 yqfF S membrane-associated HD superfamily hydrolase
PAJPMEEK_02773 3.8e-176 phoH T Phosphate starvation-inducible protein PhoH
PAJPMEEK_02774 1.8e-215 yqfD 3.1.3.102, 3.1.3.104 S Stage IV sporulation
PAJPMEEK_02775 9.3e-46 yqfC S sporulation protein YqfC
PAJPMEEK_02776 3.4e-55 yqfB
PAJPMEEK_02777 1.6e-121 yqfA S UPF0365 protein
PAJPMEEK_02778 2.8e-230 yqeZ O COG1030 Membrane-bound serine protease (ClpP class)
PAJPMEEK_02779 1.2e-68 yqeY S Yqey-like protein
PAJPMEEK_02780 1.2e-19 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PAJPMEEK_02781 1.6e-158 yqeW P COG1283 Na phosphate symporter
PAJPMEEK_02782 4.6e-260 yqeV 2.8.4.5 J ribosomal protein S12 methylthiotransferase
PAJPMEEK_02783 7.9e-140 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PAJPMEEK_02784 1.6e-174 prmA J Methylates ribosomal protein L11
PAJPMEEK_02785 1.1e-198 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PAJPMEEK_02786 0.0 dnaK O Heat shock 70 kDa protein
PAJPMEEK_02787 3.5e-76 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PAJPMEEK_02788 5.2e-187 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PAJPMEEK_02789 1.8e-217 hemN H Involved in the biosynthesis of porphyrin-containing compound
PAJPMEEK_02790 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PAJPMEEK_02791 2.7e-52 yqxA S Protein of unknown function (DUF3679)
PAJPMEEK_02792 1.4e-220 spoIIP M stage II sporulation protein P
PAJPMEEK_02793 5.9e-205 gpr 3.4.24.78 C Initiates the rapid degradation of small, acid-soluble proteins during spore germination
PAJPMEEK_02794 2.2e-36 rpsT J Binds directly to 16S ribosomal RNA
PAJPMEEK_02795 3.8e-182 holA 2.7.7.7 L DNA polymerase III delta subunit
PAJPMEEK_02796 0.0 comEC S Competence protein ComEC
PAJPMEEK_02797 8e-105 comEB 3.5.4.12 F ComE operon protein 2
PAJPMEEK_02798 2.5e-104 comEA L COG1555 DNA uptake protein and related DNA-binding proteins
PAJPMEEK_02799 8.4e-148 comER E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PAJPMEEK_02800 8.4e-139 yqeM Q Methyltransferase
PAJPMEEK_02801 3.4e-61 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PAJPMEEK_02802 3.3e-103 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
PAJPMEEK_02803 1.7e-107 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PAJPMEEK_02804 1.6e-45 yhbY J RNA-binding protein containing KH domain, possibly ribosomal protein
PAJPMEEK_02805 2.1e-157 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PAJPMEEK_02806 5e-212 yqeH S In Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
PAJPMEEK_02807 2e-94 yqeG S hydrolase of the HAD superfamily
PAJPMEEK_02809 7.7e-140 yqeF E GDSL-like Lipase/Acylhydrolase
PAJPMEEK_02810 5.8e-140 3.5.1.104 G Polysaccharide deacetylase
PAJPMEEK_02811 4.2e-107 yqeD S SNARE associated Golgi protein
PAJPMEEK_02812 1.6e-21 2.3.1.57 K Acetyltransferase (GNAT) domain
PAJPMEEK_02813 7.7e-217 EGP Major facilitator Superfamily
PAJPMEEK_02814 1.5e-124 sigK K sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PAJPMEEK_02815 5.4e-158 axeA S Carbohydrate esterase, sialic acid-specific acetylesterase
PAJPMEEK_02816 4.2e-92 K Transcriptional regulator PadR-like family
PAJPMEEK_02817 2.4e-148 ydeE K AraC family transcriptional regulator
PAJPMEEK_02818 7.3e-100 adk 2.7.4.3 F adenylate kinase activity
PAJPMEEK_02819 7.7e-32 yyaR K acetyltransferase
PAJPMEEK_02820 1.2e-57 tetL EGP Major facilitator Superfamily
PAJPMEEK_02821 6.8e-79 yyaR K Acetyltransferase (GNAT) domain
PAJPMEEK_02822 2.3e-92 yrdA S DinB family
PAJPMEEK_02824 3.8e-145 S hydrolase
PAJPMEEK_02825 1.7e-145 ybjI 3.1.3.102, 3.1.3.104, 3.1.3.23 S Sucrose-6F-phosphate phosphohydrolase
PAJPMEEK_02826 1.2e-129 glvR K Helix-turn-helix domain, rpiR family
PAJPMEEK_02827 7.4e-188 manA 5.3.1.8 G mannose-6-phosphate isomerase
PAJPMEEK_02828 0.0 manP 2.7.1.191, 2.7.1.202 G phosphotransferase system
PAJPMEEK_02829 0.0 manR 2.7.1.200, 2.7.1.202 GKT transcriptional antiterminator
PAJPMEEK_02830 2.4e-183 romA S Beta-lactamase superfamily domain
PAJPMEEK_02831 1.2e-82 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PAJPMEEK_02832 1.1e-164 yybE K Transcriptional regulator
PAJPMEEK_02833 3.8e-213 ynfM EGP Major facilitator Superfamily
PAJPMEEK_02834 0.0 MA20_16700 1.14.14.1, 1.6.2.4 C Belongs to the cytochrome P450 family
PAJPMEEK_02835 9.1e-101 Z012_03230 K Tetracycline repressor, C-terminal all-alpha domain
PAJPMEEK_02836 3.9e-93 yrhH Q methyltransferase
PAJPMEEK_02838 8e-143 focA P Formate nitrite
PAJPMEEK_02839 6e-61 yrhF S Uncharacterized conserved protein (DUF2294)
PAJPMEEK_02840 0.0 fdhA 1.17.1.10, 1.17.1.9 C formate dehydrogenase, alpha subunit
PAJPMEEK_02841 7e-81 yrhD S Protein of unknown function (DUF1641)
PAJPMEEK_02842 3e-34 yrhC S YrhC-like protein
PAJPMEEK_02843 1.4e-212 mccB 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PAJPMEEK_02844 3.6e-171 mccA 2.5.1.134, 2.5.1.47 E Cysteine synthase
PAJPMEEK_02845 7.2e-124 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PAJPMEEK_02846 2.2e-119 yrrT 4.4.1.21 Q Could be a S-adenosyl-L-methionine-dependent methyltransferase
PAJPMEEK_02847 4.1e-27 yrzA S Protein of unknown function (DUF2536)
PAJPMEEK_02848 3.1e-69 yrrS S Protein of unknown function (DUF1510)
PAJPMEEK_02849 0.0 pbpI 3.4.16.4 M Penicillin-binding Protein
PAJPMEEK_02850 3.1e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PAJPMEEK_02851 1.1e-113 udk 2.7.1.48 F Cytidine monophosphokinase
PAJPMEEK_02852 1.6e-246 yegQ O COG0826 Collagenase and related proteases
PAJPMEEK_02853 1.7e-173 yegQ O Peptidase U32
PAJPMEEK_02854 9.5e-118 yrrM 2.1.1.104 S O-methyltransferase
PAJPMEEK_02855 5.7e-192 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PAJPMEEK_02856 7.1e-46 yrzB S Belongs to the UPF0473 family
PAJPMEEK_02857 3.6e-70 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PAJPMEEK_02858 1.7e-41 yrzL S Belongs to the UPF0297 family
PAJPMEEK_02859 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PAJPMEEK_02860 5.2e-166 yrrI S AI-2E family transporter
PAJPMEEK_02861 1.1e-130 glnQ 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
PAJPMEEK_02862 3.2e-147 glnH ET Belongs to the bacterial solute-binding protein 3 family
PAJPMEEK_02863 8e-109 gluC P ABC transporter
PAJPMEEK_02864 4e-108 glnP P ABC transporter
PAJPMEEK_02865 2.1e-08 S Protein of unknown function (DUF3918)
PAJPMEEK_02866 2.9e-30 yrzR
PAJPMEEK_02867 1.8e-83 yrrD S protein conserved in bacteria
PAJPMEEK_02868 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PAJPMEEK_02869 1.7e-18 S COG0457 FOG TPR repeat
PAJPMEEK_02870 2.4e-222 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PAJPMEEK_02871 1e-212 iscS 2.8.1.7 E Cysteine desulfurase
PAJPMEEK_02872 7.8e-64 cymR K Transcriptional regulator
PAJPMEEK_02873 5.7e-236 rarA L COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase
PAJPMEEK_02874 7.4e-138 yrvM H COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
PAJPMEEK_02875 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PAJPMEEK_02876 8.8e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
PAJPMEEK_02879 1.5e-278 lytH 3.5.1.28 M COG3103 SH3 domain protein
PAJPMEEK_02880 1.8e-75 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PAJPMEEK_02881 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PAJPMEEK_02882 7.7e-91 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PAJPMEEK_02883 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PAJPMEEK_02884 5.7e-47 yrvD S Lipopolysaccharide assembly protein A domain
PAJPMEEK_02885 4.3e-86 yrvC P regulatory, ligand-binding protein related to C-terminal domains of K channels
PAJPMEEK_02886 0.0 secF U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PAJPMEEK_02887 1.3e-50 yrzD S Post-transcriptional regulator
PAJPMEEK_02888 1.6e-272 spoVB S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PAJPMEEK_02889 9.5e-110 yrbG S membrane
PAJPMEEK_02890 2.4e-60 yrzE S Protein of unknown function (DUF3792)
PAJPMEEK_02891 1.1e-37 yajC U Preprotein translocase subunit YajC
PAJPMEEK_02892 8.8e-228 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PAJPMEEK_02893 1.7e-193 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PAJPMEEK_02894 1.6e-20 yrzS S Protein of unknown function (DUF2905)
PAJPMEEK_02895 2.1e-185 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PAJPMEEK_02896 5.9e-106 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PAJPMEEK_02897 4.8e-93 bofC S BofC C-terminal domain
PAJPMEEK_02899 3e-46 S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PAJPMEEK_02900 3.9e-146 safA M spore coat assembly protein SafA
PAJPMEEK_02901 3.1e-214 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PAJPMEEK_02902 6.2e-154 nadC 1.4.3.16, 2.4.2.19 H Belongs to the NadC ModD family
PAJPMEEK_02903 1.4e-300 nadB 1.3.5.4, 1.4.3.16 H Catalyzes the oxidation of L-aspartate to iminoaspartate
PAJPMEEK_02904 1.9e-222 nifS 2.8.1.7 E Cysteine desulfurase
PAJPMEEK_02905 2.1e-94 niaR S small molecule binding protein (contains 3H domain)
PAJPMEEK_02906 1.2e-160 pheA 4.2.1.51 E Prephenate dehydratase
PAJPMEEK_02907 4.8e-73 pheB 5.4.99.5 S Belongs to the UPF0735 family
PAJPMEEK_02908 7.6e-236 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PAJPMEEK_02909 8.7e-107 spo0B T Sporulation initiation phospho-transferase B, C-terminal
PAJPMEEK_02910 5.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PAJPMEEK_02911 8e-48 ysxB J ribosomal protein
PAJPMEEK_02912 9.2e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
PAJPMEEK_02913 1.2e-160 spoIVFB S Stage IV sporulation protein
PAJPMEEK_02914 1.7e-145 spoIVFA M COG0739 Membrane proteins related to metalloendopeptidases
PAJPMEEK_02915 8e-143 minD D Belongs to the ParA family
PAJPMEEK_02916 1.5e-97 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PAJPMEEK_02917 1.4e-84 mreD M shape-determining protein
PAJPMEEK_02918 1.2e-157 mreC M Involved in formation and maintenance of cell shape
PAJPMEEK_02919 4e-184 mreB D Rod shape-determining protein MreB
PAJPMEEK_02920 1.8e-127 radC E Belongs to the UPF0758 family
PAJPMEEK_02921 1.3e-99 maf D septum formation protein Maf
PAJPMEEK_02922 3.3e-138 spoIIB S Sporulation related domain
PAJPMEEK_02923 3.5e-132 comC 3.4.23.43 NOU COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases
PAJPMEEK_02924 5.1e-240 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PAJPMEEK_02925 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PAJPMEEK_02926 2.1e-25
PAJPMEEK_02927 8.6e-198 ysxE S A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
PAJPMEEK_02928 2.2e-228 spoVID M stage VI sporulation protein D
PAJPMEEK_02929 6.2e-246 hemL 5.4.3.8 H Glutamate-1-semialdehyde aminotransferase
PAJPMEEK_02930 1e-184 hemB 4.2.1.24 H Belongs to the ALAD family
PAJPMEEK_02931 5e-142 hemD 2.1.1.107, 4.2.1.75 H Uroporphyrinogen-III synthase
PAJPMEEK_02932 2.3e-173 hemC 2.1.1.107, 2.5.1.61, 4.2.1.75 H Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps
PAJPMEEK_02933 3.6e-146 hemX O cytochrome C
PAJPMEEK_02934 2.4e-248 hemA 1.2.1.70 H Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
PAJPMEEK_02935 1.3e-87 ysxD
PAJPMEEK_02936 8.8e-107 engB D Necessary for normal cell division and for the maintenance of normal septation
PAJPMEEK_02937 0.0 lon 3.4.21.53 O ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
PAJPMEEK_02938 2.1e-310 lonB 2.7.7.7, 3.4.21.53 LO Belongs to the peptidase S16 family
PAJPMEEK_02939 7.7e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PAJPMEEK_02940 4.4e-212 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PAJPMEEK_02941 1.6e-188 ysoA H Tetratricopeptide repeat
PAJPMEEK_02942 6.2e-116 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PAJPMEEK_02943 7e-275 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PAJPMEEK_02944 1.3e-199 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PAJPMEEK_02945 2.9e-290 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PAJPMEEK_02946 5.4e-192 ilvC 1.1.1.86 EH Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PAJPMEEK_02947 2.1e-83 ilvN 2.2.1.6 E Acetolactate synthase
PAJPMEEK_02948 0.0 ilvB 2.2.1.6 E Acetolactate synthase
PAJPMEEK_02953 5.5e-89 ysnB S Phosphoesterase
PAJPMEEK_02954 1.1e-101 rdgB 3.6.1.66 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PAJPMEEK_02955 6.9e-133 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
PAJPMEEK_02956 6.9e-198 gerM S COG5401 Spore germination protein
PAJPMEEK_02957 2.7e-154 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PAJPMEEK_02958 7.4e-74 ysmB 2.4.2.28 K helix_turn_helix multiple antibiotic resistance protein
PAJPMEEK_02959 2e-30 gerE K Transcriptional regulator
PAJPMEEK_02960 7.1e-77 ybgC 3.1.2.23, 3.1.2.28 S thioesterase
PAJPMEEK_02961 1.3e-147 sdhB 1.3.5.1, 1.3.5.4 C succinate dehydrogenase
PAJPMEEK_02962 0.0 sdhA 1.3.5.1, 1.3.5.4 C succinate dehydrogenase
PAJPMEEK_02963 4.8e-108 sdhC C succinate dehydrogenase
PAJPMEEK_02964 1.2e-79 yslB S Protein of unknown function (DUF2507)
PAJPMEEK_02965 1.1e-215 lysC 1.1.1.3, 2.7.2.4 E Belongs to the aspartokinase family
PAJPMEEK_02966 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PAJPMEEK_02967 2.5e-52 trxA O Belongs to the thioredoxin family
PAJPMEEK_02968 1e-300 xsa 3.2.1.55 GH51 G Alpha-L-arabinofuranosidase C-terminus
PAJPMEEK_02969 9.3e-178 etfA C Electron transfer flavoprotein
PAJPMEEK_02970 2e-138 etfB C Electron transfer flavoprotein
PAJPMEEK_02971 1.4e-136 fadB 4.2.1.17 I Belongs to the enoyl-CoA hydratase isomerase family
PAJPMEEK_02972 9.2e-104 fadR K Transcriptional regulator
PAJPMEEK_02973 0.0 lcfA 6.2.1.3 IQ COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
PAJPMEEK_02974 2e-123 ywbB S Protein of unknown function (DUF2711)
PAJPMEEK_02975 4.7e-67 yshE S membrane
PAJPMEEK_02976 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PAJPMEEK_02977 0.0 polX L COG1796 DNA polymerase IV (family X)
PAJPMEEK_02978 1.1e-82 cvpA S membrane protein, required for colicin V production
PAJPMEEK_02979 9.1e-40 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PAJPMEEK_02980 6.4e-168 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PAJPMEEK_02981 3.6e-134 L Molecular Function DNA binding, Biological Process DNA recombination
PAJPMEEK_02982 2.2e-54 L COG2963 Transposase and inactivated derivatives
PAJPMEEK_02983 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PAJPMEEK_02984 1e-195 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PAJPMEEK_02985 3.1e-133 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PAJPMEEK_02986 2e-32 sspI S Belongs to the SspI family
PAJPMEEK_02987 2.9e-204 ysfB KT regulator
PAJPMEEK_02988 8.2e-260 glcD 1.1.3.15 C FAD binding domain
PAJPMEEK_02989 3.7e-254 glcF C Glycolate oxidase
PAJPMEEK_02990 0.0 cstA T Carbon starvation protein
PAJPMEEK_02991 1.7e-300 abfA 3.2.1.55 GH51 G alpha-L-arabinofuranosidase activity
PAJPMEEK_02992 4.4e-144 araQ G transport system permease
PAJPMEEK_02993 2.4e-167 araP P PFAM binding-protein-dependent transport systems inner membrane component
PAJPMEEK_02994 4e-253 araN G carbohydrate transport
PAJPMEEK_02995 4.2e-225 egsA 1.1.1.261 I Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species
PAJPMEEK_02996 1.1e-142 araL 3.1.3.41 G Haloacid dehalogenase-like hydrolase
PAJPMEEK_02997 4.2e-132 araD 4.1.2.17, 4.2.1.109, 5.1.3.4 G COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
PAJPMEEK_02998 0.0 araB 2.7.1.16 C Belongs to the ribulokinase family
PAJPMEEK_02999 2.8e-298 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
PAJPMEEK_03000 4e-189 abnA 3.2.1.99 GH43 G Belongs to the glycosyl hydrolase 43 family
PAJPMEEK_03001 1.8e-206 ysdC G COG1363 Cellulase M and related proteins
PAJPMEEK_03002 9.2e-68 ysdB S Sigma-w pathway protein YsdB
PAJPMEEK_03003 3.5e-42 ysdA S Membrane
PAJPMEEK_03004 2.7e-58 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PAJPMEEK_03005 3.1e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PAJPMEEK_03006 1.5e-86 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PAJPMEEK_03007 3.8e-109 lrgB M Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgA, with the holin-like protein CidA. The LrgAB and CidA proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses
PAJPMEEK_03008 9.1e-40 lrgA S effector of murein hydrolase LrgA
PAJPMEEK_03009 3.8e-131 lytT T COG3279 Response regulator of the LytR AlgR family
PAJPMEEK_03010 0.0 lytS 2.7.13.3 T Histidine kinase
PAJPMEEK_03011 7.1e-152 ysaA S HAD-hyrolase-like
PAJPMEEK_03012 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PAJPMEEK_03013 6.7e-153 ytxC S YtxC-like family
PAJPMEEK_03014 2.7e-109 ytxB S SNARE associated Golgi protein
PAJPMEEK_03015 4.3e-172 dnaI L Primosomal protein DnaI
PAJPMEEK_03016 2.7e-255 dnaB L Membrane attachment protein
PAJPMEEK_03017 4.2e-80 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PAJPMEEK_03018 1.5e-67 speH 4.1.1.50 E Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
PAJPMEEK_03019 3e-195 gapB 1.2.1.12, 1.2.1.59 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PAJPMEEK_03020 2e-67 ytcD K Transcriptional regulator
PAJPMEEK_03021 9.9e-206 ytbD EGP Major facilitator Superfamily
PAJPMEEK_03022 1.5e-160 ytbE S reductase
PAJPMEEK_03023 1.3e-97 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PAJPMEEK_03024 3.6e-106 ytaF P Probably functions as a manganese efflux pump
PAJPMEEK_03025 2e-157 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PAJPMEEK_03026 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PAJPMEEK_03027 0.0 phoR 2.7.13.3 T Signal transduction histidine kinase
PAJPMEEK_03028 5.3e-130 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAJPMEEK_03029 3.6e-171 mdh 1.1.1.37 C Catalyzes the reversible oxidation of malate to oxaloacetate
PAJPMEEK_03030 1.2e-241 icd 1.1.1.42 C isocitrate
PAJPMEEK_03031 2.8e-210 citZ 2.3.3.1 C Belongs to the citrate synthase family
PAJPMEEK_03032 7.8e-104 S aspartate phosphatase
PAJPMEEK_03033 1e-34
PAJPMEEK_03034 7.9e-65
PAJPMEEK_03036 8.5e-48 yjdF S Protein of unknown function (DUF2992)
PAJPMEEK_03037 1.1e-72 yeaL S membrane
PAJPMEEK_03038 1.1e-193 ytvI S sporulation integral membrane protein YtvI
PAJPMEEK_03039 1.6e-64 fxsA S COG3030 Protein affecting phage T7 exclusion by the F plasmid
PAJPMEEK_03040 2.2e-294 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PAJPMEEK_03041 6.8e-181 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PAJPMEEK_03042 1.1e-181 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
PAJPMEEK_03043 4.6e-160 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PAJPMEEK_03044 1.3e-224 ytsJ 1.1.1.38 C Malate dehydrogenase
PAJPMEEK_03045 0.0 dnaE 2.7.7.7 L DNA polymerase
PAJPMEEK_03046 3.2e-56 ytrH S Sporulation protein YtrH
PAJPMEEK_03047 5.1e-87 ytrI
PAJPMEEK_03048 4.4e-23
PAJPMEEK_03049 2.1e-182 nrnA 3.1.13.3, 3.1.3.7 S COG0618 Exopolyphosphatase-related proteins
PAJPMEEK_03050 8.2e-48 ytpI S YtpI-like protein
PAJPMEEK_03051 7.5e-239 ytoI K transcriptional regulator containing CBS domains
PAJPMEEK_03052 2.5e-129 ytkL S Belongs to the UPF0173 family
PAJPMEEK_03053 2.9e-142 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PAJPMEEK_03055 1.8e-264 argH 4.3.2.1 E argininosuccinate lyase
PAJPMEEK_03056 5.6e-233 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PAJPMEEK_03057 2.8e-88 moaB 2.7.7.75 H May be involved in the biosynthesis of molybdopterin
PAJPMEEK_03058 4.9e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PAJPMEEK_03059 1.4e-184 ytxK 2.1.1.72 L DNA methylase
PAJPMEEK_03060 2.4e-89 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PAJPMEEK_03061 1.6e-60 ytfJ S Sporulation protein YtfJ
PAJPMEEK_03062 3.8e-109 ytfI S Protein of unknown function (DUF2953)
PAJPMEEK_03063 4.5e-88 yteJ S RDD family
PAJPMEEK_03064 6.4e-182 sppA OU signal peptide peptidase SppA
PAJPMEEK_03065 3.3e-152 nadK 2.7.1.23 G Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PAJPMEEK_03066 4.4e-311 ytcJ S amidohydrolase
PAJPMEEK_03067 5.9e-307 acsA 6.2.1.1, 6.2.1.2 I COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
PAJPMEEK_03068 3.9e-31 sspB S spore protein
PAJPMEEK_03069 7.3e-225 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PAJPMEEK_03070 4.1e-209 iscS2 2.8.1.7 E Cysteine desulfurase
PAJPMEEK_03071 2.6e-239 braB E Component of the transport system for branched-chain amino acids
PAJPMEEK_03072 8.6e-264 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PAJPMEEK_03073 1.6e-154 hisK 3.1.3.15 E COG1387 Histidinol phosphatase and related hydrolases of the PHP family
PAJPMEEK_03074 5e-108 yttP K Transcriptional regulator
PAJPMEEK_03075 1.1e-86 ytsP 1.8.4.14 T GAF domain-containing protein
PAJPMEEK_03076 2.7e-284 ytrP 2.7.7.65 T COG2199 FOG GGDEF domain
PAJPMEEK_03077 2.5e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PAJPMEEK_03078 3e-259 ywdH 1.2.1.3 C Belongs to the aldehyde dehydrogenase family
PAJPMEEK_03079 3.6e-102 yokH G SMI1 / KNR4 family
PAJPMEEK_03081 9.2e-59 UW Hep Hag repeat protein
PAJPMEEK_03082 6.4e-221 hmp 1.14.12.17 C Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
PAJPMEEK_03083 7.3e-09
PAJPMEEK_03084 6.5e-90 yhbO 1.11.1.6, 3.5.1.124 S protease
PAJPMEEK_03086 1.3e-139 E GDSL-like Lipase/Acylhydrolase family
PAJPMEEK_03087 1.1e-150 fieF P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PAJPMEEK_03088 4.4e-149 K Transcriptional regulator
PAJPMEEK_03089 5.2e-125 azlC E AzlC protein
PAJPMEEK_03090 8.7e-48 azlD S Branched-chain amino acid transport protein (AzlD)
PAJPMEEK_03091 4.2e-239 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PAJPMEEK_03092 0.0 acsA 6.2.1.1 I COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
PAJPMEEK_03093 3e-121 acuA K Part of the acuABC operon, which is possibly involved in the breakdown of acetoin and butanediol. Acts as an acetyltransferase inactivating acetyl-CoA synthetase AcsA via acetylation at a Lys residue
PAJPMEEK_03094 7.1e-118 acuB S Domain in cystathionine beta-synthase and other proteins.
PAJPMEEK_03095 4.3e-230 acuC BQ histone deacetylase
PAJPMEEK_03096 1.4e-119 motS N Flagellar motor protein
PAJPMEEK_03097 8.7e-145 motA N flagellar motor
PAJPMEEK_03098 1.4e-181 ccpA K catabolite control protein A
PAJPMEEK_03099 1.9e-195 aroF 2.5.1.54, 5.4.99.5 E Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate
PAJPMEEK_03100 4.5e-44 ytxJ O Protein of unknown function (DUF2847)
PAJPMEEK_03101 1.7e-16 ytxH S COG4980 Gas vesicle protein
PAJPMEEK_03102 1.7e-14 ytxG S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PAJPMEEK_03103 4.9e-251 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PAJPMEEK_03104 0.0 sftA D Belongs to the FtsK SpoIIIE SftA family
PAJPMEEK_03105 9.1e-107 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PAJPMEEK_03106 3.7e-148 ytpQ S Belongs to the UPF0354 family
PAJPMEEK_03107 1.6e-57 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PAJPMEEK_03108 1.7e-78 ytoQ S Nucleoside 2-deoxyribosyltransferase YtoQ
PAJPMEEK_03109 5.8e-205 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
PAJPMEEK_03110 1.7e-51 ytzB S small secreted protein
PAJPMEEK_03111 0.0 sfcA 1.1.1.38 C Malate dehydrogenase
PAJPMEEK_03112 3.5e-165 ytnP S COG0491 Zn-dependent hydrolases, including glyoxylases
PAJPMEEK_03113 8e-125 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PAJPMEEK_03114 3.5e-45 ytzH S YtzH-like protein
PAJPMEEK_03115 6.3e-156 ytmP 2.7.1.89 M Phosphotransferase
PAJPMEEK_03116 6.1e-179 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PAJPMEEK_03117 2.9e-168 ytlQ
PAJPMEEK_03118 1.5e-100 ligT 3.1.4.58, 3.5.1.42 J Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
PAJPMEEK_03119 8.6e-173 ytkP 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PAJPMEEK_03120 1.2e-271 pepV 3.5.1.18 E Dipeptidase
PAJPMEEK_03121 4.1e-229 pbuO S permease
PAJPMEEK_03122 1.4e-217 ythQ U Bacterial ABC transporter protein EcsB
PAJPMEEK_03123 4.9e-128 ythP V ABC transporter
PAJPMEEK_03124 2.4e-33 ytzE K COG1349 Transcriptional regulators of sugar metabolism
PAJPMEEK_03125 1.7e-131 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PAJPMEEK_03126 7.7e-294 ytgP S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PAJPMEEK_03127 1.3e-235 ytfP S HI0933-like protein
PAJPMEEK_03128 4.4e-283 opuD M Belongs to the BCCT transporter (TC 2.A.15) family
PAJPMEEK_03129 9e-26 yteV S Sporulation protein Cse60
PAJPMEEK_03130 2.6e-186 msmR K Transcriptional regulator
PAJPMEEK_03131 9.8e-244 msmE G Bacterial extracellular solute-binding protein
PAJPMEEK_03132 2.6e-166 amyD G Binding-protein-dependent transport system inner membrane component
PAJPMEEK_03133 1.4e-142 amyC P ABC transporter (permease)
PAJPMEEK_03134 1.3e-251 melA 3.2.1.122, 3.2.1.22, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase
PAJPMEEK_03135 5.4e-86 M Acetyltransferase (GNAT) domain
PAJPMEEK_03136 2.1e-51 ytwF P Sulfurtransferase
PAJPMEEK_03137 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PAJPMEEK_03138 1.2e-52 ytvB S Protein of unknown function (DUF4257)
PAJPMEEK_03139 6.2e-140 pfyP T Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PAJPMEEK_03140 2.1e-208 yttB EGP Major facilitator Superfamily
PAJPMEEK_03141 2e-124 ywaF S Integral membrane protein
PAJPMEEK_03142 0.0 bceB V ABC transporter (permease)
PAJPMEEK_03143 9.8e-135 bceA V ABC transporter, ATP-binding protein
PAJPMEEK_03144 9.2e-170 T PhoQ Sensor
PAJPMEEK_03145 3.3e-129 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAJPMEEK_03146 1.1e-221 ytrF V COG0577 ABC-type antimicrobial peptide transport system, permease component
PAJPMEEK_03147 1.3e-125 ytrE V ABC transporter, ATP-binding protein
PAJPMEEK_03148 3.6e-161
PAJPMEEK_03149 2.7e-172 P ABC-2 family transporter protein
PAJPMEEK_03150 7e-173 S ABC-2 family transporter protein
PAJPMEEK_03151 3.8e-162 ytrB P abc transporter atp-binding protein
PAJPMEEK_03152 3.9e-66 ytrA K GntR family transcriptional regulator
PAJPMEEK_03153 1.3e-39 ytzC S Protein of unknown function (DUF2524)
PAJPMEEK_03154 2.1e-190 yhcC S Fe-S oxidoreductase
PAJPMEEK_03155 1.9e-106 ytqB J Putative rRNA methylase
PAJPMEEK_03157 2.9e-212 ytpB 4.2.3.130 S Tetraprenyl-beta-curcumene synthase
PAJPMEEK_03158 2.9e-150 ytpA 3.1.1.5 I Alpha beta hydrolase
PAJPMEEK_03159 2.3e-58 ytoA S COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
PAJPMEEK_03160 1.9e-261 ytnA E COG1113 Gamma-aminobutyrate permease and related permeases
PAJPMEEK_03161 0.0 asnB 6.3.5.4 E Asparagine synthase
PAJPMEEK_03162 1.5e-225 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PAJPMEEK_03163 1.3e-309 pckA 4.1.1.49 C Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
PAJPMEEK_03164 1.6e-38 ytmB S Protein of unknown function (DUF2584)
PAJPMEEK_03165 3.6e-148 ytmA E COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases
PAJPMEEK_03166 3.3e-186 ytlA P COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components
PAJPMEEK_03167 3.2e-144 ytlC P ABC transporter
PAJPMEEK_03168 2.4e-126 ytlD P COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
PAJPMEEK_03169 9.8e-88 ytkD 3.6.1.55 L Belongs to the Nudix hydrolase family
PAJPMEEK_03170 5e-61 ytkC S Bacteriophage holin family
PAJPMEEK_03171 1.6e-76 dps P Belongs to the Dps family
PAJPMEEK_03173 1.4e-75 ytkA S YtkA-like
PAJPMEEK_03174 5.7e-88 luxS 4.4.1.21 T Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PAJPMEEK_03175 1.8e-39 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PAJPMEEK_03176 8e-105 ytiB 4.2.1.1 P Reversible hydration of carbon dioxide
PAJPMEEK_03177 8.8e-40 rpmE2 J Ribosomal protein L31
PAJPMEEK_03178 1.2e-239 cydA 1.10.3.14 C oxidase, subunit
PAJPMEEK_03179 2.6e-186 cydB 1.10.3.14 C COG1294 Cytochrome bd-type quinol oxidase, subunit 2
PAJPMEEK_03180 2.3e-24 S Domain of Unknown Function (DUF1540)
PAJPMEEK_03181 2.4e-214 menC 4.2.1.113 H Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)
PAJPMEEK_03182 1.2e-277 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
PAJPMEEK_03183 2.4e-155 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PAJPMEEK_03184 1.7e-156 menH 4.2.99.20 S Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC)
PAJPMEEK_03185 0.0 menD 2.2.1.9 H Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
PAJPMEEK_03186 1.5e-272 menF 5.4.4.2 HQ Isochorismate synthase
PAJPMEEK_03187 2e-132 dksA T COG1734 DnaK suppressor protein
PAJPMEEK_03188 1.5e-77 tspO T membrane
PAJPMEEK_03197 7.8e-08
PAJPMEEK_03198 1.3e-09
PAJPMEEK_03205 1.6e-08
PAJPMEEK_03210 3.4e-39 S COG NOG14552 non supervised orthologous group
PAJPMEEK_03212 3.3e-98 thiT S Thiamine transporter protein (Thia_YuaJ)
PAJPMEEK_03213 1.9e-125 yuaG 3.4.21.72 S protein conserved in bacteria
PAJPMEEK_03214 5.6e-84 yuaF OU Membrane protein implicated in regulation of membrane protease activity
PAJPMEEK_03215 3.3e-83 yuaE S DinB superfamily
PAJPMEEK_03216 2.5e-109 yuaD S MOSC domain
PAJPMEEK_03217 7.1e-228 gbsB 1.1.1.1 C alcohol dehydrogenase
PAJPMEEK_03218 5.5e-283 gbsA 1.2.1.8 C Belongs to the aldehyde dehydrogenase family
PAJPMEEK_03219 2.7e-97 yuaC K Belongs to the GbsR family
PAJPMEEK_03220 2.1e-94 yuaB
PAJPMEEK_03221 1.1e-121 ktrA P COG0569 K transport systems, NAD-binding component
PAJPMEEK_03222 6.7e-148 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PAJPMEEK_03223 1.7e-218 hmp 1.14.12.17 C Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
PAJPMEEK_03224 1.3e-124 G Cupin
PAJPMEEK_03225 2.3e-53 yjcN
PAJPMEEK_03227 2.3e-145 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PAJPMEEK_03228 9e-196 yubA S transporter activity
PAJPMEEK_03229 2.1e-185 ygjR S Oxidoreductase
PAJPMEEK_03230 5.1e-98 pfpI 1.11.1.6, 3.5.1.124 S DJ-1/PfpI family
PAJPMEEK_03231 2.3e-239 mcpA NT chemotaxis protein
PAJPMEEK_03232 3.2e-225 mcpA NT chemotaxis protein
PAJPMEEK_03233 2.5e-238 mcpA NT chemotaxis protein
PAJPMEEK_03234 4.5e-219 mcpA NT chemotaxis protein
PAJPMEEK_03235 1.3e-139 tgl 2.3.2.13 S protein-glutamine gamma-glutamyltransferase activity
PAJPMEEK_03236 4.8e-41
PAJPMEEK_03237 3.5e-191 yrpB 1.13.12.16 S COG2070 Dioxygenases related to 2-nitropropane dioxygenase
PAJPMEEK_03238 3.1e-77 yugU S Uncharacterised protein family UPF0047
PAJPMEEK_03239 0.0 yugT 3.2.1.10, 3.2.1.20 GH13,GH31 G COG0366 Glycosidases
PAJPMEEK_03240 2.5e-231 yugS S COG1253 Hemolysins and related proteins containing CBS domains
PAJPMEEK_03241 8.3e-117 yugP S Zn-dependent protease
PAJPMEEK_03242 5.3e-19
PAJPMEEK_03243 9.6e-26 mstX S Membrane-integrating protein Mistic
PAJPMEEK_03244 1.1e-181 yugO P COG1226 Kef-type K transport systems
PAJPMEEK_03245 2.8e-72 yugN S YugN-like family
PAJPMEEK_03247 8.7e-259 pgi 5.3.1.9 G Belongs to the GPI family
PAJPMEEK_03248 4.7e-97 S NADPH-dependent FMN reductase
PAJPMEEK_03249 6.5e-119 ycaC Q Isochorismatase family
PAJPMEEK_03250 2.1e-229 yugK C Dehydrogenase
PAJPMEEK_03251 1.3e-226 yugJ C oxidoreductases, Fe-dependent alcohol dehydrogenase family
PAJPMEEK_03252 1.8e-34 yuzA S Domain of unknown function (DUF378)
PAJPMEEK_03253 6e-59 yugI 5.3.1.9 J RNA binding protein (contains ribosomal protein S1 domain)
PAJPMEEK_03254 5e-210 yugH 2.6.1.1 E Aminotransferase
PAJPMEEK_03255 2e-83 alaR K Transcriptional regulator
PAJPMEEK_03256 1.1e-155 yugF I Hydrolase
PAJPMEEK_03257 1.4e-40 yugE S Domain of unknown function (DUF1871)
PAJPMEEK_03258 1.9e-225 patB 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PAJPMEEK_03259 1.2e-230 T PhoQ Sensor
PAJPMEEK_03260 3.1e-68 kapB G Kinase associated protein B
PAJPMEEK_03261 1.7e-117 kapD L the KinA pathway to sporulation
PAJPMEEK_03262 1.5e-185 yuxJ EGP Major facilitator Superfamily
PAJPMEEK_03263 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Penicillin-binding Protein
PAJPMEEK_03264 2.2e-72 yuxK S protein conserved in bacteria
PAJPMEEK_03265 9.3e-74 yufK S Family of unknown function (DUF5366)
PAJPMEEK_03266 1.5e-294 dcuS 2.7.13.3 T Signal transduction histidine kinase regulating citrate malate metabolism
PAJPMEEK_03267 2.7e-126 dcuR T COG4565 Response regulator of citrate malate metabolism
PAJPMEEK_03268 2.4e-195 tcsA S ABC-type transport system, periplasmic component surface lipoprotein
PAJPMEEK_03269 5e-287 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
PAJPMEEK_03270 6.5e-185 yufP S Belongs to the binding-protein-dependent transport system permease family
PAJPMEEK_03271 3.5e-169 yufQ S Belongs to the binding-protein-dependent transport system permease family
PAJPMEEK_03272 8.9e-12
PAJPMEEK_03273 0.0 phaA 1.6.5.3 CP COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit
PAJPMEEK_03274 1.8e-69 mrpB P Subunit B of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PAJPMEEK_03275 3.1e-51 phaC 1.6.5.3 P Subunit C of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PAJPMEEK_03276 6.5e-263 mrpD CP Subunit D of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PAJPMEEK_03277 1.6e-77 mrpE P Subunit E of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PAJPMEEK_03278 1.1e-38 phaF P Subunit F of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PAJPMEEK_03279 5.2e-60 phaG P COG1320 Multisubunit Na H antiporter, MnhG subunit
PAJPMEEK_03280 3.2e-65 ydiI Q protein, possibly involved in aromatic compounds catabolism
PAJPMEEK_03281 1.8e-113 comA K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PAJPMEEK_03282 6.5e-254 comP 2.7.13.3 T Histidine kinase
PAJPMEEK_03284 2e-62 comQ H Polyprenyl synthetase
PAJPMEEK_03286 6.8e-51 yuzC
PAJPMEEK_03287 4.1e-231 yuxH 3.1.4.52 T signal transduction protein containing EAL and modified HD-GYP domains
PAJPMEEK_03288 7.2e-283 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PAJPMEEK_03289 1.1e-103 pncA Q COG1335 Amidases related to nicotinamidase
PAJPMEEK_03290 7.2e-68 yueI S Protein of unknown function (DUF1694)
PAJPMEEK_03291 2.8e-38 yueH S YueH-like protein
PAJPMEEK_03292 6.4e-34 yueG S Spore germination protein gerPA/gerPF
PAJPMEEK_03293 1.9e-187 yueF S transporter activity
PAJPMEEK_03294 1.6e-22 S Protein of unknown function (DUF2642)
PAJPMEEK_03295 6.3e-96 yueE S phosphohydrolase
PAJPMEEK_03296 4.9e-131 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PAJPMEEK_03297 3.8e-76 yueC S Family of unknown function (DUF5383)
PAJPMEEK_03298 0.0 esaA S type VII secretion protein EsaA
PAJPMEEK_03299 0.0 essC D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
PAJPMEEK_03300 3.1e-205 essB S WXG100 protein secretion system (Wss), protein YukC
PAJPMEEK_03301 3.9e-40 yukD S WXG100 protein secretion system (Wss), protein YukD
PAJPMEEK_03302 3.3e-46 esxA S Belongs to the WXG100 family
PAJPMEEK_03303 1.5e-228 yukF QT Transcriptional regulator
PAJPMEEK_03304 1e-204 ald 1.4.1.1 E Belongs to the AlaDH PNT family
PAJPMEEK_03305 7.5e-134 yukJ S Uncharacterized conserved protein (DUF2278)
PAJPMEEK_03306 3e-36 mbtH S MbtH-like protein
PAJPMEEK_03307 0.0 dhbF Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAJPMEEK_03308 2.9e-173 entB 3.3.2.1, 6.3.2.14 Q Isochorismatase family
PAJPMEEK_03309 0.0 entE 2.7.7.58, 6.3.2.14 Q 2,3-dihydroxybenzoate-AMP ligase
PAJPMEEK_03310 4.7e-224 entC 5.4.4.2 HQ Isochorismate synthase
PAJPMEEK_03311 3.5e-135 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PAJPMEEK_03312 1.5e-166 besA S Putative esterase
PAJPMEEK_03313 4.1e-120 yuiH S Oxidoreductase molybdopterin binding domain
PAJPMEEK_03314 1.1e-101 bioY S Biotin biosynthesis protein
PAJPMEEK_03315 4e-208 yuiF S antiporter
PAJPMEEK_03316 4e-281 pepA 3.4.11.1, 3.4.11.5 E Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
PAJPMEEK_03317 2.7e-77 yuiD S protein conserved in bacteria
PAJPMEEK_03318 4.6e-117 yuiC S protein conserved in bacteria
PAJPMEEK_03319 3.8e-27 yuiB S Putative membrane protein
PAJPMEEK_03320 2.5e-236 yumB 1.6.99.3 C NADH dehydrogenase
PAJPMEEK_03321 8.6e-187 yumC 1.18.1.2, 1.19.1.1 C reductase
PAJPMEEK_03323 4.6e-185 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PAJPMEEK_03324 4.8e-29
PAJPMEEK_03325 3.1e-71 CP Membrane
PAJPMEEK_03326 1.6e-123 V ABC transporter
PAJPMEEK_03328 2.9e-33 S Bacteriocin class IId cyclical uberolysin-like
PAJPMEEK_03330 4.8e-91 rimJ 2.3.1.128 J Alanine acetyltransferase
PAJPMEEK_03331 1.6e-137 dltE M Belongs to the short-chain dehydrogenases reductases (SDR) family
PAJPMEEK_03334 2.8e-150 D phage tail tape measure protein
PAJPMEEK_03336 8.4e-11
PAJPMEEK_03341 5.6e-19
PAJPMEEK_03342 5.4e-12 K Helix-turn-helix XRE-family like proteins
PAJPMEEK_03343 1.4e-28
PAJPMEEK_03345 2.4e-119
PAJPMEEK_03351 1e-53
PAJPMEEK_03352 1.5e-11 K Cro/C1-type HTH DNA-binding domain
PAJPMEEK_03355 8.4e-13 K Cro/C1-type HTH DNA-binding domain
PAJPMEEK_03357 1.6e-62 L Phage integrase family
PAJPMEEK_03358 1e-104 S Helix-turn-helix domain
PAJPMEEK_03359 6.2e-132 L Belongs to the 'phage' integrase family
PAJPMEEK_03360 1.1e-62 erpA S Belongs to the HesB IscA family
PAJPMEEK_03361 5.7e-163 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PAJPMEEK_03362 1.7e-213 yutK F Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PAJPMEEK_03363 2.4e-39 yuzB S Belongs to the UPF0349 family
PAJPMEEK_03364 3.2e-208 yutJ 1.6.99.3 C NADH dehydrogenase
PAJPMEEK_03365 3.3e-55 yuzD S protein conserved in bacteria
PAJPMEEK_03366 1.2e-35 yutI O COG0694 Thioredoxin-like proteins and domains
PAJPMEEK_03367 0.0 yuxL 3.4.14.5, 3.4.19.1 EU peptidase
PAJPMEEK_03368 3.4e-169 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PAJPMEEK_03369 4e-198 thrC 4.2.3.1 E Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
PAJPMEEK_03370 7.1e-242 hom 1.1.1.3 E homoserine dehydrogenase
PAJPMEEK_03371 1.4e-197 yutH S Spore coat protein
PAJPMEEK_03372 8.7e-85 pgpA 3.1.3.27 I COG1267 Phosphatidylglycerophosphatase A and related proteins
PAJPMEEK_03373 8.5e-142 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PAJPMEEK_03374 9.5e-74 yutE S Protein of unknown function DUF86
PAJPMEEK_03375 1.7e-47 yutD S protein conserved in bacteria
PAJPMEEK_03376 8e-168 lipA 2.8.1.8 H Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
PAJPMEEK_03377 1.2e-193 lytH M Peptidase, M23
PAJPMEEK_03378 8.7e-131 yunB S Sporulation protein YunB (Spo_YunB)
PAJPMEEK_03379 5.3e-267 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PAJPMEEK_03380 1.8e-145 yunE S membrane transporter protein
PAJPMEEK_03381 1.5e-168 yunF S Protein of unknown function DUF72
PAJPMEEK_03382 5.2e-62 3.1.3.18, 3.8.1.2 S phosphoglycolate phosphatase activity
PAJPMEEK_03383 4.1e-264 allB 3.5.2.5 F Catalyzes the conversion of allantoin (5- ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring
PAJPMEEK_03384 1.8e-303 pucR QT COG2508 Regulator of polyketide synthase expression
PAJPMEEK_03387 6.8e-132 S Aspartate phosphatase response regulator
PAJPMEEK_03388 1.4e-68
PAJPMEEK_03389 1.4e-212 blt EGP Major facilitator Superfamily
PAJPMEEK_03390 2.3e-237 pucG 2.6.1.112, 2.6.1.44, 2.6.1.45, 2.6.1.51 E COG0075 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase
PAJPMEEK_03391 1.7e-237 pucF 3.5.1.6, 3.5.1.87, 3.5.3.9 E COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases
PAJPMEEK_03392 4.1e-169 bsn L Ribonuclease
PAJPMEEK_03393 3.7e-207 msmX P Belongs to the ABC transporter superfamily
PAJPMEEK_03394 1.4e-133 yurK K UTRA
PAJPMEEK_03395 6.3e-162 yurL 2.7.1.218 G pfkB family carbohydrate kinase
PAJPMEEK_03396 2.6e-163 yurM P COG0395 ABC-type sugar transport system, permease component
PAJPMEEK_03397 1.5e-158 yurN G Binding-protein-dependent transport system inner membrane component
PAJPMEEK_03398 3.6e-246 yurO G COG1653 ABC-type sugar transport system, periplasmic component
PAJPMEEK_03399 7.9e-185 frlB M Catalyzes the conversion of a range of fructosamine 6- phosphates to glucose 6-phosphate and a free amino acid
PAJPMEEK_03400 5.9e-166 K helix_turn_helix, mercury resistance
PAJPMEEK_03401 1.2e-13
PAJPMEEK_03402 3.4e-76
PAJPMEEK_03403 2.1e-22 S Sporulation delaying protein SdpA
PAJPMEEK_03405 3.1e-65 yurQ 2.7.7.7 L COG0322 Nuclease subunit of the excinuclease complex
PAJPMEEK_03406 5.6e-203 yurR 1.4.5.1 E COG0665 Glycine D-amino acid oxidases (deaminating)
PAJPMEEK_03407 7.8e-126 Q ubiE/COQ5 methyltransferase family
PAJPMEEK_03408 9.4e-80 yncE S Protein of unknown function (DUF2691)
PAJPMEEK_03409 6.6e-156 csn 3.2.1.132 M Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan
PAJPMEEK_03410 3e-270 sufB O FeS cluster assembly
PAJPMEEK_03411 8.5e-78 nifU C COG0822 NifU homolog involved in Fe-S cluster formation
PAJPMEEK_03412 2.1e-235 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PAJPMEEK_03413 1.2e-244 sufD O assembly protein SufD
PAJPMEEK_03414 2.3e-142 sufC O COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component
PAJPMEEK_03415 7.6e-64 yurZ 2.3.1.12, 4.1.1.44 S Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
PAJPMEEK_03416 2.3e-145 metQ P Belongs to the NlpA lipoprotein family
PAJPMEEK_03417 1.8e-95 metI P COG2011 ABC-type metal ion transport system, permease component
PAJPMEEK_03418 4.8e-185 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PAJPMEEK_03419 5e-57 yusD S SCP-2 sterol transfer family
PAJPMEEK_03420 1.6e-54 yusE CO Thioredoxin
PAJPMEEK_03421 3.7e-63 rnmV 3.1.26.8 L COG1658 Small primase-like proteins (Toprim domain)
PAJPMEEK_03422 3.7e-40 yusG S Protein of unknown function (DUF2553)
PAJPMEEK_03423 2.4e-65 gcvH E Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate
PAJPMEEK_03424 2.1e-63 arsC 1.20.4.1 P Belongs to the ArsC family
PAJPMEEK_03425 0.0 fadE 1.3.8.1 I acyl-CoA dehydrogenase
PAJPMEEK_03426 1.6e-216 fadA 2.3.1.16 I Belongs to the thiolase family
PAJPMEEK_03427 0.0 fadB 1.1.1.35, 4.2.1.17, 5.1.2.3 I 3-hydroxyacyl-CoA dehydrogenase
PAJPMEEK_03428 1.3e-165 fadM E Proline dehydrogenase
PAJPMEEK_03429 6.7e-43
PAJPMEEK_03430 1.1e-53 yusN M Coat F domain
PAJPMEEK_03431 2.8e-68 yusO K Iron dependent repressor, N-terminal DNA binding domain
PAJPMEEK_03432 8.1e-288 yusP P Major facilitator superfamily
PAJPMEEK_03433 3.7e-157 ywbI2 K Transcriptional regulator
PAJPMEEK_03434 1.7e-139 adc 4.1.1.4 Q Acetoacetate decarboxylase (ADC)
PAJPMEEK_03435 3.9e-190 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PAJPMEEK_03436 3.3e-39 yusU S Protein of unknown function (DUF2573)
PAJPMEEK_03437 1.4e-150 yusV 3.6.3.34 HP ABC transporter
PAJPMEEK_03438 7.2e-45 S YusW-like protein
PAJPMEEK_03439 0.0 pepF2 E COG1164 Oligoendopeptidase F
PAJPMEEK_03440 6.2e-154 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PAJPMEEK_03441 1.6e-79 dps P Belongs to the Dps family
PAJPMEEK_03442 4.8e-241 htrA 3.4.21.107 O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PAJPMEEK_03443 2.6e-126 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAJPMEEK_03444 1e-251 cssS 2.7.13.3 T PhoQ Sensor
PAJPMEEK_03445 3.4e-24
PAJPMEEK_03446 2.7e-158 yuxN K Transcriptional regulator
PAJPMEEK_03447 3.9e-262 fumC 1.1.1.38, 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PAJPMEEK_03448 6.6e-24 S Protein of unknown function (DUF3970)
PAJPMEEK_03449 8.4e-260 gerAA EG Spore germination protein
PAJPMEEK_03450 2e-184 gerAB E Spore germination protein
PAJPMEEK_03451 3.3e-203 gerAC S Spore germination B3/ GerAC like, C-terminal
PAJPMEEK_03452 3.3e-107 vraR KT COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PAJPMEEK_03453 2.3e-193 vraS 2.7.13.3 T Histidine kinase
PAJPMEEK_03454 6.8e-125 yvqF S Cell wall-active antibiotics response 4TMS YvqF
PAJPMEEK_03455 2.3e-127 liaG S Putative adhesin
PAJPMEEK_03456 1.5e-94 liaH KT COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription
PAJPMEEK_03457 8.1e-45 liaI S membrane
PAJPMEEK_03458 7.5e-228 yvqJ EGP Major facilitator Superfamily
PAJPMEEK_03459 3.7e-102 yvqK 2.5.1.17 S Adenosyltransferase
PAJPMEEK_03460 4.7e-227 yvrA 3.6.3.34 HP COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
PAJPMEEK_03461 3.3e-181 btuC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PAJPMEEK_03462 1.1e-167 yvrC P ABC transporter substrate-binding protein
PAJPMEEK_03463 3.1e-139 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PAJPMEEK_03464 2e-171 yvrE G SMP-30/Gluconolaconase/LRE-like region
PAJPMEEK_03465 0.0 T PhoQ Sensor
PAJPMEEK_03466 6.7e-133 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAJPMEEK_03467 1.1e-36
PAJPMEEK_03468 9.9e-103 yvrI K RNA polymerase
PAJPMEEK_03469 1.6e-15 S YvrJ protein family
PAJPMEEK_03470 9.2e-233 oxdC 4.1.1.2 G Oxalate decarboxylase
PAJPMEEK_03471 1.6e-65 yvrL S Regulatory protein YrvL
PAJPMEEK_03472 1.4e-147 fhuC 3.6.3.34 HP ABC transporter
PAJPMEEK_03473 1.2e-175 fhuG P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PAJPMEEK_03474 5.6e-184 fhuB P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PAJPMEEK_03475 4e-178 fhuD P ABC transporter
PAJPMEEK_03476 1.8e-235 yvsH E Arginine ornithine antiporter
PAJPMEEK_03477 3.6e-14 S Small spore protein J (Spore_SspJ)
PAJPMEEK_03478 1.3e-84 yvsG S LexA-binding, inner membrane-associated putative hydrolase
PAJPMEEK_03479 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
PAJPMEEK_03480 2.7e-166 yvgK P COG1910 Periplasmic molybdate-binding protein domain
PAJPMEEK_03481 4.5e-138 modA P COG0725 ABC-type molybdate transport system, periplasmic component
PAJPMEEK_03482 7.9e-99 modB P COG4149 ABC-type molybdate transport system, permease component
PAJPMEEK_03483 2.4e-113 yfiK K Regulator
PAJPMEEK_03484 1.1e-177 T Histidine kinase
PAJPMEEK_03485 5.6e-172 yfiL V COG1131 ABC-type multidrug transport system, ATPase component
PAJPMEEK_03486 2.7e-194 yfiM V ABC-2 type transporter
PAJPMEEK_03487 6.2e-197 yfiN V COG0842 ABC-type multidrug transport system, permease component
PAJPMEEK_03488 5e-156 yvgN S reductase
PAJPMEEK_03489 1.1e-86 yvgO
PAJPMEEK_03490 0.0 yjcE P COG0025 NhaP-type Na H and K H antiporters
PAJPMEEK_03491 0.0 cysI 1.7.7.1, 1.8.1.2, 1.8.7.1 P Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate
PAJPMEEK_03492 0.0 cysJ 1.8.1.2 P Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
PAJPMEEK_03493 0.0 helD 3.6.4.12 L DNA helicase
PAJPMEEK_03494 3.1e-99 yvgT S membrane
PAJPMEEK_03495 2.6e-141 S Metallo-peptidase family M12
PAJPMEEK_03496 6e-73 bdbC O Required for disulfide bond formation in some proteins
PAJPMEEK_03497 1.2e-102 bdbD O Thioredoxin
PAJPMEEK_03498 0.0 cadA 3.6.3.3, 3.6.3.5 P COG2217 Cation transport ATPase
PAJPMEEK_03499 0.0 copA 3.6.3.54 P P-type ATPase
PAJPMEEK_03500 2.6e-29 copZ P Heavy-metal-associated domain
PAJPMEEK_03501 1.1e-47 csoR S transcriptional
PAJPMEEK_03502 1.8e-195 yvaA 1.1.1.371 S Oxidoreductase
PAJPMEEK_03503 1.9e-118 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PAJPMEEK_03504 1.9e-163 K Helix-turn-helix XRE-family like proteins
PAJPMEEK_03505 7.2e-220 ynfM EGP Major Facilitator Superfamily
PAJPMEEK_03506 2.7e-70 4.1.1.44 S Carboxymuconolactone decarboxylase family
PAJPMEEK_03507 4e-147 S Amidohydrolase
PAJPMEEK_03508 1.2e-255 moxC C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PAJPMEEK_03509 1.1e-46 ytnI O COG0695 Glutaredoxin and related proteins
PAJPMEEK_03510 1.1e-181 ytmO C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PAJPMEEK_03511 2.1e-140 tcyN 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
PAJPMEEK_03512 2.9e-120 tcyM U Binding-protein-dependent transport system inner membrane component
PAJPMEEK_03513 1.4e-122 tcyL P Binding-protein-dependent transport system inner membrane component
PAJPMEEK_03514 4.9e-148 tcyK M Bacterial periplasmic substrate-binding proteins
PAJPMEEK_03515 8.4e-132 ytmJ ET Bacterial periplasmic substrate-binding proteins
PAJPMEEK_03516 3e-101 ytmI K Acetyltransferase (GNAT) domain
PAJPMEEK_03517 4.8e-165 ytlI K LysR substrate binding domain
PAJPMEEK_03518 6.9e-139 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PAJPMEEK_03519 1.3e-45 yrdF K ribonuclease inhibitor
PAJPMEEK_03521 1.6e-82 smpB O Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
PAJPMEEK_03522 0.0 rnr K 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PAJPMEEK_03523 7.4e-143 est 3.1.1.1 S Carboxylesterase
PAJPMEEK_03524 4.8e-24 secG U Preprotein translocase subunit SecG
PAJPMEEK_03525 6e-35 yvzC K Transcriptional
PAJPMEEK_03526 1e-69 K transcriptional
PAJPMEEK_03527 4e-72 yvaO K Cro/C1-type HTH DNA-binding domain
PAJPMEEK_03528 1.7e-51 yodB K transcriptional
PAJPMEEK_03529 4.1e-259 T His Kinase A (phosphoacceptor) domain
PAJPMEEK_03530 2e-123 K Transcriptional regulatory protein, C terminal
PAJPMEEK_03531 5.1e-139 mutG S ABC-2 family transporter protein
PAJPMEEK_03532 9.9e-124 spaE S ABC-2 family transporter protein
PAJPMEEK_03533 2.1e-126 mutF V ABC transporter, ATP-binding protein
PAJPMEEK_03534 2.3e-111 opuCD P COG1174 ABC-type proline glycine betaine transport systems, permease component
PAJPMEEK_03535 1.7e-173 opuCC M COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PAJPMEEK_03536 2.7e-112 opuCB P COG1174 ABC-type proline glycine betaine transport systems, permease component
PAJPMEEK_03537 4.9e-210 opuCA 3.6.3.32 E COG1125 ABC-type proline glycine betaine transport systems, ATPase components
PAJPMEEK_03538 4.3e-76 yvbF K Belongs to the GbsR family
PAJPMEEK_03539 4.4e-110 opuCD P COG1174 ABC-type proline glycine betaine transport systems, permease component
PAJPMEEK_03540 7.2e-172 opuCC M COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PAJPMEEK_03541 4.5e-112 opuCB P COG1174 ABC-type proline glycine betaine transport systems, permease component
PAJPMEEK_03542 6.7e-212 opuCA 3.6.3.32 E COG1125 ABC-type proline glycine betaine transport systems, ATPase components
PAJPMEEK_03543 1.9e-98 yvbF K Belongs to the GbsR family
PAJPMEEK_03544 5.2e-105 yvbG U UPF0056 membrane protein
PAJPMEEK_03545 2.9e-120 exoY M Membrane
PAJPMEEK_03546 0.0 tcaA S response to antibiotic
PAJPMEEK_03547 3.8e-81 yvbK 3.1.3.25 K acetyltransferase
PAJPMEEK_03548 7.8e-214 EGP Major facilitator Superfamily
PAJPMEEK_03549 3.2e-180
PAJPMEEK_03550 9.8e-126 S GlcNAc-PI de-N-acetylase
PAJPMEEK_03551 2.5e-143 C WbqC-like protein family
PAJPMEEK_03552 1.3e-146 M Protein involved in cellulose biosynthesis
PAJPMEEK_03553 1.2e-233 E UDP-4-amino-4-deoxy-L-arabinose aminotransferase
PAJPMEEK_03554 2.5e-172 5.1.3.2 M GDP-mannose 4,6 dehydratase
PAJPMEEK_03555 1.3e-218 spsC 2.6.1.102 E Belongs to the DegT DnrJ EryC1 family
PAJPMEEK_03556 6.2e-257 1.1.1.136 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PAJPMEEK_03557 1.2e-238 ywaD 3.4.11.10, 3.4.11.6 S PA domain
PAJPMEEK_03558 6.4e-243 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PAJPMEEK_03559 7.5e-299 gpmI 5.4.2.12 G Catalyzes the interconversion of 2-phosphoglycerate and
PAJPMEEK_03560 6.6e-139 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PAJPMEEK_03561 1.7e-218 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PAJPMEEK_03562 2.1e-185 gapA 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PAJPMEEK_03563 2.3e-187 cggR K COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
PAJPMEEK_03565 7.4e-253 araE EGP Major facilitator Superfamily
PAJPMEEK_03566 2.2e-204 araR K transcriptional
PAJPMEEK_03567 7.1e-189 yvbT C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PAJPMEEK_03569 4e-156 yvbU K Transcriptional regulator
PAJPMEEK_03570 1.6e-158 yvbV EG EamA-like transporter family
PAJPMEEK_03571 5e-214 yvbW E COG1113 Gamma-aminobutyrate permease and related permeases
PAJPMEEK_03572 9e-261
PAJPMEEK_03573 1.1e-183 purR7 5.1.1.1 K Transcriptional regulator
PAJPMEEK_03574 7.7e-115 yyaS S Membrane
PAJPMEEK_03575 6.7e-167 3.1.3.104 S hydrolases of the HAD superfamily
PAJPMEEK_03576 3.5e-152 ybbH_1 K RpiR family transcriptional regulator
PAJPMEEK_03577 3.2e-297 gntK 2.7.1.12, 2.7.1.17, 2.7.1.189 G Belongs to the FGGY kinase family
PAJPMEEK_03578 2.1e-225 gntP EG COG2610 H gluconate symporter and related permeases
PAJPMEEK_03579 1.8e-133 lutC S Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
PAJPMEEK_03580 6.2e-271 lutB C Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate
PAJPMEEK_03581 3.2e-135 lutA C Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
PAJPMEEK_03582 1.2e-224 EK COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PAJPMEEK_03583 7.8e-121 yvfI K COG2186 Transcriptional regulators
PAJPMEEK_03584 8.4e-304 yvfH C L-lactate permease
PAJPMEEK_03585 9.1e-245 rpoN K COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog
PAJPMEEK_03586 2.7e-32 yvfG S YvfG protein
PAJPMEEK_03587 1.9e-186 yvfF GM Exopolysaccharide biosynthesis protein
PAJPMEEK_03588 6.9e-220 epsN 2.6.1.102 E Belongs to the DegT DnrJ EryC1 family
PAJPMEEK_03589 1.2e-56 epsM GM COG0110 Acetyltransferase (isoleucine patch superfamily)
PAJPMEEK_03590 3.4e-109 epsL M COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PAJPMEEK_03591 7e-273 pglK S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PAJPMEEK_03592 2.1e-196 epsJ GT2 S COG0463 Glycosyltransferases involved in cell wall biogenesis
PAJPMEEK_03593 9.8e-205 epsI GM pyruvyl transferase
PAJPMEEK_03594 1.5e-194 epsH GT2 S Glycosyltransferase like family 2
PAJPMEEK_03595 9.1e-206 epsG S EpsG family
PAJPMEEK_03596 1.4e-212 epsF GT4 M Glycosyl transferases group 1
PAJPMEEK_03597 1.8e-161 epsE GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
PAJPMEEK_03598 2.8e-218 epsD GT4 M Glycosyl transferase 4-like
PAJPMEEK_03599 0.0 pglF 4.2.1.115, 4.2.1.135, 4.2.1.46 GM Polysaccharide biosynthesis protein
PAJPMEEK_03600 1.4e-116 epsB 2.7.10.2 D COG0489 ATPases involved in chromosome partitioning
PAJPMEEK_03601 5.4e-119 ywqC M biosynthesis protein
PAJPMEEK_03602 5.1e-78 slr K transcriptional
PAJPMEEK_03603 4.2e-283 pnbA CE10 I Belongs to the type-B carboxylesterase lipase family
PAJPMEEK_03605 2.6e-97 ywjB H RibD C-terminal domain
PAJPMEEK_03606 5.7e-112 yyaS S Membrane
PAJPMEEK_03607 6.4e-93 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PAJPMEEK_03608 5.5e-94 padC Q Phenolic acid decarboxylase
PAJPMEEK_03609 7e-17 S Protein of unknown function (DUF1433)
PAJPMEEK_03610 1.2e-39 S Protein of unknown function (DUF1433)
PAJPMEEK_03611 1.8e-16 S Protein of unknown function (DUF1433)
PAJPMEEK_03612 3.1e-270 I Pfam Lipase (class 3)
PAJPMEEK_03613 1.8e-34
PAJPMEEK_03615 4.4e-296 cscA 3.2.1.26, 3.2.1.65 GH32 G invertase
PAJPMEEK_03616 1.2e-219 rafB P LacY proton/sugar symporter
PAJPMEEK_03617 1e-184 scrR K transcriptional
PAJPMEEK_03618 2.4e-104 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PAJPMEEK_03619 6.7e-164 yraN K Transcriptional regulator
PAJPMEEK_03620 4.9e-215 yraM S PrpF protein
PAJPMEEK_03621 2e-250 EGP Sugar (and other) transporter
PAJPMEEK_03622 6.2e-105 yvdD 3.2.2.10 S Belongs to the LOG family
PAJPMEEK_03623 6.8e-53 yvdC S MazG nucleotide pyrophosphohydrolase domain
PAJPMEEK_03624 3.3e-281 sulP P COG0659 Sulfate permease and related transporters (MFS superfamily)
PAJPMEEK_03625 7.4e-106 ytiB 4.2.1.1 P Reversible hydration of carbon dioxide
PAJPMEEK_03626 3.3e-183 ghrB 1.1.1.215, 1.1.1.26, 1.1.1.43, 1.1.1.79, 1.1.1.81 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PAJPMEEK_03627 1.6e-79 M Ribonuclease
PAJPMEEK_03628 7.8e-28 nhoA 2.3.1.118 Q Belongs to the arylamine N-acetyltransferase family
PAJPMEEK_03629 4.4e-21
PAJPMEEK_03630 2.6e-143 nhoA 2.3.1.118 Q Belongs to the arylamine N-acetyltransferase family
PAJPMEEK_03631 4.7e-36 crh G Phosphocarrier protein Chr
PAJPMEEK_03632 3.1e-170 whiA K May be required for sporulation
PAJPMEEK_03633 1.7e-176 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PAJPMEEK_03634 1.1e-166 rapZ S Displays ATPase and GTPase activities
PAJPMEEK_03635 6.5e-87 yvcI 3.6.1.55 F COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
PAJPMEEK_03636 3.5e-177 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PAJPMEEK_03637 4e-121 usp CBM50 M protein conserved in bacteria
PAJPMEEK_03638 2.7e-274 S COG0457 FOG TPR repeat
PAJPMEEK_03639 3.2e-192 sasA T Histidine kinase
PAJPMEEK_03640 5e-122 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAJPMEEK_03641 0.0 msbA2 3.6.3.44 V ABC transporter
PAJPMEEK_03642 2.1e-111 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E belongs to the PRA-CH family
PAJPMEEK_03643 8.1e-137 hisF E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PAJPMEEK_03644 7.6e-132 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PAJPMEEK_03645 7.3e-115 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PAJPMEEK_03646 5.1e-107 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
PAJPMEEK_03647 1.1e-234 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PAJPMEEK_03648 4.3e-115 hisG 2.4.2.17 E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PAJPMEEK_03649 3.6e-208 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PAJPMEEK_03650 1.8e-138 yvpB NU protein conserved in bacteria
PAJPMEEK_03651 5.4e-84 yvoF S COG0110 Acetyltransferase (isoleucine patch superfamily)
PAJPMEEK_03652 1.7e-114 ppaX 3.1.3.18, 3.6.1.1 S Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK P. Might play a role in controlling the intracellular pyrophosphate pool
PAJPMEEK_03653 1.2e-151 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PAJPMEEK_03654 1.5e-169 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Also phosphorylates dephosphorylates the HPr-like catabolite repression protein crh on a specific serine residue. Therefore, by controlling the phosphorylation state of HPr and crh, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PAJPMEEK_03655 3.6e-224 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PAJPMEEK_03656 1.2e-134 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PAJPMEEK_03657 1.1e-133 yvoA K transcriptional
PAJPMEEK_03658 3.6e-105 yxaF K Transcriptional regulator
PAJPMEEK_03659 0.0 yvnB 3.1.4.53 Q Calcineurin-like phosphoesterase
PAJPMEEK_03660 3.9e-41 yvlD S Membrane
PAJPMEEK_03661 9.6e-26 pspB KT PspC domain
PAJPMEEK_03662 3.2e-166 yvlB S Putative adhesin
PAJPMEEK_03663 6.1e-49 yvlA
PAJPMEEK_03664 6.6e-38 yvkN
PAJPMEEK_03665 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PAJPMEEK_03666 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PAJPMEEK_03667 7.6e-33 csbA S protein conserved in bacteria
PAJPMEEK_03668 0.0 yvkC 2.7.9.2 GT Phosphotransferase
PAJPMEEK_03669 2.4e-110 yvkB K Transcriptional regulator
PAJPMEEK_03670 3e-227 yvkA EGP Major facilitator Superfamily
PAJPMEEK_03671 1.3e-221 minJ O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PAJPMEEK_03672 4.1e-56 swrA S Swarming motility protein
PAJPMEEK_03673 1.4e-256 ctpB 3.4.21.102 M Belongs to the peptidase S41A family
PAJPMEEK_03674 2.2e-228 ywoF P Right handed beta helix region
PAJPMEEK_03675 1.7e-154 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
PAJPMEEK_03676 1e-122 ftsE D cell division ATP-binding protein FtsE
PAJPMEEK_03677 2.8e-36 cccB C COG2010 Cytochrome c, mono- and diheme variants
PAJPMEEK_03678 9.3e-150 yvjA S Uncharacterized protein conserved in bacteria (DUF2179)
PAJPMEEK_03679 5.1e-176 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PAJPMEEK_03680 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PAJPMEEK_03681 3.7e-102 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PAJPMEEK_03682 6.8e-68
PAJPMEEK_03683 2.6e-10 fliT S bacterial-type flagellum organization
PAJPMEEK_03684 3e-66 fliS N flagellar protein FliS
PAJPMEEK_03685 2.1e-261 fliD N morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
PAJPMEEK_03686 3.9e-116 fliC N Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
PAJPMEEK_03687 2.3e-31 csrA T Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
PAJPMEEK_03688 8.5e-75 fliW S Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
PAJPMEEK_03689 1.4e-80 yviE
PAJPMEEK_03690 6.1e-163 flgL N Belongs to the bacterial flagellin family
PAJPMEEK_03691 1.1e-273 flgK N flagellar hook-associated protein
PAJPMEEK_03692 8.9e-81 flgN NOU FlgN protein
PAJPMEEK_03693 4.7e-39 flgM KNU Negative regulator of flagellin synthesis
PAJPMEEK_03694 1.4e-74 yvyF S flagellar protein
PAJPMEEK_03695 1.6e-77 comFC S Phosphoribosyl transferase domain
PAJPMEEK_03696 1.5e-43 comFB S Late competence development protein ComFB
PAJPMEEK_03697 6.2e-260 comFA L COG4098 Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
PAJPMEEK_03698 1.4e-158 degV S protein conserved in bacteria
PAJPMEEK_03699 2e-126 degU KT COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PAJPMEEK_03700 1.7e-181 degS 2.7.13.3 T Member of the two-component regulatory system DegS DegU, which plays an important role in the transition growth phase
PAJPMEEK_03701 2e-120 yvyE 3.4.13.9 S Domain of unknown function (DUF1949)
PAJPMEEK_03702 3e-173 yvhJ K Transcriptional regulator
PAJPMEEK_03703 1.1e-182 tagO 2.7.8.33, 2.7.8.35 M COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase UDP-N-acetylglucosamine-1-phosphate transferase
PAJPMEEK_03704 1.4e-239 tuaH M Teichuronic acid biosynthesis glycosyltransferase tuaH
PAJPMEEK_03705 8.9e-144 tuaG GT2 M Glycosyltransferase like family 2
PAJPMEEK_03706 3.5e-115 tuaF M protein involved in exopolysaccharide biosynthesis
PAJPMEEK_03707 4.2e-256 tuaE M Teichuronic acid biosynthesis protein
PAJPMEEK_03708 5.1e-251 tuaD 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PAJPMEEK_03709 2e-222 tuaC 2.4.1.21, 3.2.1.1 GH13,GT4,GT5 GM Teichuronic acid
PAJPMEEK_03710 2.3e-257 wzxC S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PAJPMEEK_03711 6.2e-117 tuaA M COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PAJPMEEK_03712 9.1e-209 lytC 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
PAJPMEEK_03713 1.3e-306 lytB 3.5.1.28 D Stage II sporulation protein
PAJPMEEK_03714 5.9e-30
PAJPMEEK_03715 7.5e-137 lytR K May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG)
PAJPMEEK_03716 2.7e-184 mnaA 5.1.3.14 M Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PAJPMEEK_03717 3.7e-157 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PAJPMEEK_03718 2e-182 tagH 3.6.3.38, 3.6.3.40 GM Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PAJPMEEK_03719 7.5e-136 tagG GM Transport permease protein
PAJPMEEK_03720 0.0 tagF 2.7.8.12 M glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
PAJPMEEK_03721 2.2e-258 tagE 2.4.1.52 GT4 M Glycosyl transferase 1 domain A
PAJPMEEK_03722 3.4e-70 tagD 2.7.7.15, 2.7.7.39 IM Cytidylyltransferase
PAJPMEEK_03723 1.5e-143 tagA 2.4.1.187 GT26 M Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PAJPMEEK_03724 1.3e-218 tagB 2.7.8.14, 2.7.8.44, 2.7.8.47 M glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
PAJPMEEK_03725 1.2e-232 atl 3.2.1.96, 3.5.1.28 GH73 G Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PAJPMEEK_03726 3.5e-190 pmi 5.3.1.8 G mannose-6-phosphate isomerase
PAJPMEEK_03727 7.4e-264 gerBA EG Spore germination protein
PAJPMEEK_03728 3.7e-199 gerBB E Spore germination protein
PAJPMEEK_03729 1.4e-214 gerAC S Spore germination protein
PAJPMEEK_03730 7.3e-269 GT2,GT4 J Glycosyl transferase family 2
PAJPMEEK_03731 4.9e-249 ywtG EGP Major facilitator Superfamily
PAJPMEEK_03732 8.5e-179 ywtF K Transcriptional regulator
PAJPMEEK_03733 4.2e-158 ywtE 3.1.3.104 S hydrolases of the HAD superfamily
PAJPMEEK_03734 2.5e-20 yttA 2.7.13.3 S Pfam Transposase IS66
PAJPMEEK_03735 1.1e-239 pgdS CBM50 M COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
PAJPMEEK_03736 1.1e-19 ywtC
PAJPMEEK_03737 1.2e-219 capA M enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
PAJPMEEK_03738 2.3e-70 pgsC S biosynthesis protein
PAJPMEEK_03739 1e-223 murD 6.3.2.9 M COG0769 UDP-N-acetylmuramyl tripeptide synthase
PAJPMEEK_03740 7.7e-184 gerKA EG Spore germination protein
PAJPMEEK_03741 3.3e-192 gerKB E Spore germination protein
PAJPMEEK_03742 2.1e-205 gerKC S Spore germination B3/ GerAC like, C-terminal
PAJPMEEK_03743 9.4e-178 rbsR K transcriptional
PAJPMEEK_03744 3e-159 rbsK 2.7.1.15, 2.7.1.4 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PAJPMEEK_03745 9.6e-65 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PAJPMEEK_03746 3.4e-280 rbsA 3.6.3.17 G Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system
PAJPMEEK_03747 2.9e-155 rbsC G Belongs to the binding-protein-dependent transport system permease family
PAJPMEEK_03748 2e-161 rbsB G COG1879 ABC-type sugar transport system, periplasmic component
PAJPMEEK_03749 5.2e-90 batE T Sh3 type 3 domain protein
PAJPMEEK_03750 1.1e-95 ywrO 1.6.5.2 S NADPH-quinone reductase (modulator of drug activity B)
PAJPMEEK_03751 7.9e-148 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
PAJPMEEK_03752 1.2e-308 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
PAJPMEEK_03753 9e-167 alsR K LysR substrate binding domain
PAJPMEEK_03755 1.2e-241 ywrK P Involved in arsenical resistance. Thought to form the channel of an arsenite pump
PAJPMEEK_03756 4.4e-126 ywrJ
PAJPMEEK_03757 9.2e-132 cotB
PAJPMEEK_03758 4.5e-213 cotH M Spore Coat
PAJPMEEK_03759 2.2e-09
PAJPMEEK_03760 2.5e-112 ywrF S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PAJPMEEK_03761 3e-303 ggt 2.3.2.2, 3.4.19.13 E gamma-glutamyltransferase
PAJPMEEK_03762 1.1e-83 ywrC K Transcriptional regulator
PAJPMEEK_03763 1.2e-103 ywrB P Chromate transporter
PAJPMEEK_03764 4.4e-89 ywrA P COG2059 Chromate transport protein ChrA
PAJPMEEK_03765 1.9e-135 nfi 3.1.21.7 L DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA
PAJPMEEK_03766 5.1e-95
PAJPMEEK_03767 5.8e-64
PAJPMEEK_03768 9e-260 ywqJ S Pre-toxin TG
PAJPMEEK_03769 9.5e-37 ywqI S Family of unknown function (DUF5344)
PAJPMEEK_03770 8.5e-22 S Domain of unknown function (DUF5082)
PAJPMEEK_03772 3.9e-150 ywqG S Domain of unknown function (DUF1963)
PAJPMEEK_03773 8e-249 ugd 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PAJPMEEK_03774 1.8e-139 ywqE 3.1.3.48 GM COG4464 Capsular polysaccharide biosynthesis protein
PAJPMEEK_03775 4.3e-121 ywqD 2.7.10.1 D COG0489 ATPases involved in chromosome partitioning
PAJPMEEK_03776 5.2e-112 ywqC M biosynthesis protein
PAJPMEEK_03777 1.3e-14
PAJPMEEK_03778 5.4e-308 ywqB S SWIM zinc finger
PAJPMEEK_03779 0.0 ywqA L COG0553 Superfamily II DNA RNA helicases, SNF2 family
PAJPMEEK_03780 5.7e-155 ywpJ 3.1.3.104 S hydrolases of the HAD superfamily
PAJPMEEK_03781 6.4e-138 glcR K DeoR C terminal sensor domain
PAJPMEEK_03782 3.7e-57 ssbB L Single-stranded DNA-binding protein
PAJPMEEK_03783 4e-62 ywpG
PAJPMEEK_03784 3.9e-69 ywpF S YwpF-like protein
PAJPMEEK_03785 1.4e-47 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PAJPMEEK_03786 4.9e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PAJPMEEK_03787 2.9e-201 S aspartate phosphatase
PAJPMEEK_03788 6.1e-146 flhP N flagellar basal body
PAJPMEEK_03789 3.2e-128 flhO N flagellar basal body
PAJPMEEK_03790 2.7e-180 mbl D Rod shape-determining protein
PAJPMEEK_03791 1.8e-44 spoIIID K Stage III sporulation protein D
PAJPMEEK_03792 8.5e-72 ywoH K transcriptional
PAJPMEEK_03793 3.8e-213 ywoG EGP Major facilitator Superfamily
PAJPMEEK_03794 1.6e-274 ybbW FH COG1953 Cytosine uracil thiamine allantoin permeases
PAJPMEEK_03795 1.8e-243 ywoD EGP Major facilitator superfamily
PAJPMEEK_03796 5.7e-103 phzA Q Isochorismatase family
PAJPMEEK_03797 2.5e-228 amt P Ammonium transporter
PAJPMEEK_03798 2e-58 nrgB K Belongs to the P(II) protein family
PAJPMEEK_03799 3.5e-208 ftsW D Belongs to the SEDS family
PAJPMEEK_03800 3.2e-101 bcrC 3.6.1.27 I COG0671 Membrane-associated phospholipid phosphatase
PAJPMEEK_03801 1.1e-71 ywnJ S VanZ like family
PAJPMEEK_03802 4.9e-122 spoIIQ M COG0739 Membrane proteins related to metalloendopeptidases
PAJPMEEK_03803 1.2e-88 ywnH 2.3.1.183 M COG1247 Sortase and related acyltransferases
PAJPMEEK_03804 1.2e-10 ywnC S Family of unknown function (DUF5362)
PAJPMEEK_03805 4.2e-69 ywnF S Family of unknown function (DUF5392)
PAJPMEEK_03806 1.2e-277 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PAJPMEEK_03807 1.3e-53 ywnC S Family of unknown function (DUF5362)
PAJPMEEK_03808 9e-121 xlnB 3.2.1.8 G Glycosyl hydrolases family 11
PAJPMEEK_03809 2.1e-67 ywnA K Transcriptional regulator
PAJPMEEK_03810 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
PAJPMEEK_03811 3.8e-63 ureB 3.5.1.5 E Belongs to the urease beta subunit family
PAJPMEEK_03812 1.1e-50 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
PAJPMEEK_03813 6.5e-11 csbD K CsbD-like
PAJPMEEK_03814 6.1e-82 ywmF S Peptidase M50
PAJPMEEK_03815 2.8e-93 S response regulator aspartate phosphatase
PAJPMEEK_03816 1.6e-191 moaA 4.1.99.22, 4.6.1.17 H Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
PAJPMEEK_03817 3.8e-145 fdhD C Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
PAJPMEEK_03819 7.8e-123 ywmD S protein containing a von Willebrand factor type A (vWA) domain
PAJPMEEK_03820 1.2e-123 ywmC S protein containing a von Willebrand factor type A (vWA) domain
PAJPMEEK_03821 1.9e-189 spoIID D Stage II sporulation protein D
PAJPMEEK_03822 4.7e-241 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PAJPMEEK_03823 3.3e-135 ywmB S TATA-box binding
PAJPMEEK_03824 1.3e-32 ywzB S membrane
PAJPMEEK_03825 1.2e-90 ywmA
PAJPMEEK_03826 1.8e-63 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PAJPMEEK_03827 2.4e-267 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PAJPMEEK_03828 5.9e-152 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PAJPMEEK_03829 8.2e-282 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PAJPMEEK_03830 1.3e-88 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAJPMEEK_03831 1.3e-42 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PAJPMEEK_03832 1.6e-26 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PAJPMEEK_03833 9.3e-130 atpB C it plays a direct role in the translocation of protons across the membrane
PAJPMEEK_03834 2.1e-61 atpI S ATP synthase
PAJPMEEK_03835 1e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PAJPMEEK_03836 3.5e-238 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PAJPMEEK_03837 1.7e-96 ywlG S Belongs to the UPF0340 family
PAJPMEEK_03838 1.1e-80 rpiB 5.3.1.6 G Ribose 5-phosphate isomerase
PAJPMEEK_03839 1.1e-77 ywlE 3.1.3.48, 3.9.1.2, 5.3.1.6 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PAJPMEEK_03840 1.2e-84 mntP P Probably functions as a manganese efflux pump
PAJPMEEK_03841 5.1e-190 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PAJPMEEK_03842 3.6e-76 ywlB 1.20.4.1, 2.3.1.1 E Belongs to the acetyltransferase family. ArgA subfamily
PAJPMEEK_03843 3.9e-114 spoIIR S stage II sporulation protein R
PAJPMEEK_03844 5.2e-60 ywlA S Uncharacterised protein family (UPF0715)
PAJPMEEK_03846 1.6e-157 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PAJPMEEK_03847 1.9e-192 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PAJPMEEK_03848 7.6e-67 yaeR E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PAJPMEEK_03849 6.7e-96 racA K Required for the formation of axial filaments and for anchoring the origin regions at the cell poles in sporulating cells, thus ensuring proper chromosome segregation in the prespore. Binds in a dispersed manner throughout the chromosome but preferentially to sites clustered in the origin portion of the chromosome, causing condensation of the chromosome and its remodeling into an elongated, anchored structure
PAJPMEEK_03850 3.6e-158 ywkB S Membrane transport protein
PAJPMEEK_03851 0.0 sfcA 1.1.1.38 C malic enzyme
PAJPMEEK_03852 4.1e-104 tdk 2.7.1.21 F thymidine kinase
PAJPMEEK_03853 1.1e-32 rpmE J Binds the 23S rRNA
PAJPMEEK_03854 4.3e-239 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PAJPMEEK_03855 5.6e-175 glpX 3.1.3.11, 3.1.3.37 G fructose-1,6-bisphosphatase
PAJPMEEK_03856 6.6e-240 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PAJPMEEK_03857 6.4e-111 tal 2.2.1.2 G Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PAJPMEEK_03858 5.5e-158 fbaA 4.1.2.13, 4.1.2.29 G Aldolase
PAJPMEEK_03859 8.5e-63 spo0F T COG0784 FOG CheY-like receiver
PAJPMEEK_03860 1.7e-93 ywjG S Domain of unknown function (DUF2529)
PAJPMEEK_03861 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PAJPMEEK_03862 2.2e-48 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PAJPMEEK_03863 0.0 fadF C COG0247 Fe-S oxidoreductase
PAJPMEEK_03864 9.2e-220 clsB I Belongs to the phospholipase D family. Cardiolipin synthase subfamily
PAJPMEEK_03865 8e-182 uvsE L Component in a DNA repair pathway. Removal of UV-light damaged nucleotides. Recognizes pyrimidine dimers and cleave a phosphodiester bond immediately 5' to the lesion
PAJPMEEK_03866 1.2e-42 ywjC
PAJPMEEK_03867 0.0 ywjA V ABC transporter
PAJPMEEK_03868 3.1e-300 ywiE I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PAJPMEEK_03869 4e-105 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PAJPMEEK_03870 2e-123 narI 1.7.5.1 C nitrate reductase, gamma
PAJPMEEK_03871 1.9e-98 narJ 1.7.5.1 C nitrate reductase
PAJPMEEK_03872 1.8e-294 narH 1.7.5.1 C Nitrate reductase, beta
PAJPMEEK_03873 0.0 narG 1.7.5.1 C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PAJPMEEK_03874 2e-85 arfM T cyclic nucleotide binding
PAJPMEEK_03875 2.2e-139 ywiC S YwiC-like protein
PAJPMEEK_03876 1e-128 fnr K helix_turn_helix, cAMP Regulatory protein
PAJPMEEK_03877 5.8e-214 narK P COG2223 Nitrate nitrite transporter
PAJPMEEK_03878 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PAJPMEEK_03879 1.2e-73 ywiB S protein conserved in bacteria
PAJPMEEK_03881 2.7e-231 ywhL CO amine dehydrogenase activity
PAJPMEEK_03882 3.8e-222 ywhK CO amine dehydrogenase activity
PAJPMEEK_03883 5.4e-76 S aspartate phosphatase
PAJPMEEK_03885 2.6e-29 ydcG K sequence-specific DNA binding
PAJPMEEK_03886 5e-33
PAJPMEEK_03887 2e-28 S Domain of unknown function (DUF4177)
PAJPMEEK_03889 8.1e-77 CP Membrane
PAJPMEEK_03892 5.4e-169 speB 3.5.3.11 E Belongs to the arginase family
PAJPMEEK_03893 4.1e-158 speE 2.5.1.16 E Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
PAJPMEEK_03894 0.0 pbpG 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PAJPMEEK_03895 2.9e-83
PAJPMEEK_03896 1.4e-95 ywhD S YwhD family
PAJPMEEK_03897 1.2e-117 ywhC S Peptidase family M50
PAJPMEEK_03898 1.3e-24 dmpI 5.3.2.6 G 4-oxalocrotonate tautomerase
PAJPMEEK_03899 3.6e-70 ywhA K Transcriptional regulator
PAJPMEEK_03900 1.3e-246 yhdG_1 E C-terminus of AA_permease
PAJPMEEK_03901 9.2e-89 ywgA 2.1.1.72, 3.1.21.3
PAJPMEEK_03902 7.9e-257 ywfO S COG1078 HD superfamily phosphohydrolases
PAJPMEEK_03903 6.9e-36 ywzC S Belongs to the UPF0741 family
PAJPMEEK_03904 3e-110 rsfA_1
PAJPMEEK_03905 4.8e-51 padR K PadR family transcriptional regulator
PAJPMEEK_03906 8.1e-94 S membrane
PAJPMEEK_03907 1.6e-166 V ABC transporter, ATP-binding protein
PAJPMEEK_03908 3.5e-169 yhcI S ABC transporter (permease)
PAJPMEEK_03911 8e-179
PAJPMEEK_03913 7.7e-160 lipL 2.3.1.200, 2.3.1.204 H Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes
PAJPMEEK_03914 1.9e-161 cysL K Transcriptional regulator
PAJPMEEK_03915 3.3e-159 MA20_14895 S Conserved hypothetical protein 698
PAJPMEEK_03916 5.1e-176 pta 2.3.1.19, 2.3.1.8, 3.6.3.21 C In Salmonella this enzyme is required for ethanolamine catabolism
PAJPMEEK_03917 1.1e-146 ywfI C May function as heme-dependent peroxidase
PAJPMEEK_03918 7.5e-141 IQ Enoyl-(Acyl carrier protein) reductase
PAJPMEEK_03919 4.6e-235 ywfG 2.6.1.83 E Aminotransferase class I and II
PAJPMEEK_03920 2.1e-208 bacE EGP Major facilitator Superfamily
PAJPMEEK_03921 2e-269 purD 6.3.2.49, 6.3.4.13 F Part of the bacABCDEFG operon responsible for the biosynthesis of bacilysin, an irreversible inactivator of the glutaminase domain of glucosamine synthetase. Catalyzes the formation of alpha-dipeptides from various L-amino acids in the presence of ATP. In vivo catalyzes the ligation of L-alanine and L-anticapsin (epoxycyclohexanonyl-Ala) to produce the final bacilysin antibiotic (L-Ala-L-4S-cyclohexenonyl-Ala dipeptide)
PAJPMEEK_03922 4.6e-140 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PAJPMEEK_03923 1.5e-137 bacB 5.3.3.19, 5.4.99.5 S Part of the bacABCDEF operon responsible for the biosynthesis of the nonribosomally synthesized dipeptide antibiotic bacilysin, composed of L-alanine and L-anticapsin. Bacilysin is an irreversible inactivator of the glutaminase domain of glucosamine synthetase. BacB catalyzes the allylic isomerization of the
PAJPMEEK_03924 3.9e-113 pheA 1.1.1.3, 1.3.1.12, 4.1.1.100, 4.2.1.51, 5.4.99.5 E Part of the bacABCDEF operon responsible for the biosynthesis of the nonribosomally synthesized dipeptide antibiotic bacilysin, composed of L-alanine and L-anticapsin. Bacilysin is an irreversible inactivator of the glutaminase domain of glucosamine synthetase. BacA is an unusual prephenate decarboxylase that avoids the typical aromatization of the cyclohexadienol ring of prephenate. BacA catalyzes the protonation of prephenate (1-carboxy-4-hydroxy-alpha-oxo-2,5-cyclohexadiene-1- propanoic acid) at C6 position, followed by a decarboxylation to produce the endocyclic-delta(4),delta(8)-7R-dihydro- hydroxyphenylpyruvate (en-H2HPP). En-H2HPP is able to undergo a slow nonenzymatic isomerization to produce the exocyclic- delta(3),delta(5)-dihydro-hydroxyphenylpyruvate (ex-H2HPP). BacA isomerizes only the pro-R double bond in prephenate
PAJPMEEK_03925 1.6e-222 ywfA EGP Major facilitator Superfamily
PAJPMEEK_03926 2.9e-205 tcaB EGP Major facilitator Superfamily
PAJPMEEK_03927 7.5e-261 lysP E amino acid
PAJPMEEK_03928 0.0 rocB E arginine degradation protein
PAJPMEEK_03929 1.3e-295 putA 1.2.1.88, 1.5.5.2 C Belongs to the aldehyde dehydrogenase family. RocA subfamily
PAJPMEEK_03930 2.5e-247 rocG 1.4.1.2, 1.4.1.3 E Belongs to the Glu Leu Phe Val dehydrogenases family
PAJPMEEK_03931 1.2e-161 T PhoQ Sensor
PAJPMEEK_03932 3.5e-126 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAJPMEEK_03933 1.9e-65
PAJPMEEK_03934 2.8e-115 S ABC-2 family transporter protein
PAJPMEEK_03935 6.7e-173 bcrA5 V ABC transporter, ATP-binding protein
PAJPMEEK_03936 3.5e-87 spsL 5.1.3.13 M Spore Coat
PAJPMEEK_03937 4e-161 spsK 1.1.1.133 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PAJPMEEK_03938 9.3e-183 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PAJPMEEK_03939 3.2e-138 spsI 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PAJPMEEK_03940 4e-184 spsG M Spore Coat
PAJPMEEK_03941 2.3e-136 spsF M Spore Coat
PAJPMEEK_03942 7.6e-216 spsE 2.5.1.56 M acid synthase
PAJPMEEK_03943 2e-160 spsD 2.3.1.210 K Spore Coat
PAJPMEEK_03944 5.1e-223 spsC E Belongs to the DegT DnrJ EryC1 family
PAJPMEEK_03945 1.7e-276 spsB M Capsule polysaccharide biosynthesis protein
PAJPMEEK_03946 2.6e-143 spsA M Spore Coat
PAJPMEEK_03947 1e-64 gerQ S Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA
PAJPMEEK_03948 4.2e-46 ywdK S small membrane protein
PAJPMEEK_03949 5.2e-232 ywdJ F Xanthine uracil
PAJPMEEK_03950 8.1e-40 ywdI S Family of unknown function (DUF5327)
PAJPMEEK_03951 1.4e-132 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PAJPMEEK_03952 1.5e-152 ywdF GT2,GT4 S Glycosyltransferase like family 2
PAJPMEEK_03954 5.3e-89 ywdD
PAJPMEEK_03955 6.3e-57 pex K Transcriptional regulator PadR-like family
PAJPMEEK_03956 6e-146 thiD 2.5.1.3, 2.7.1.35, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PAJPMEEK_03957 9.7e-20 ywdA
PAJPMEEK_03958 1.9e-288 scrB 3.2.1.26, 3.2.1.65 GH32 G invertase
PAJPMEEK_03959 3.6e-252 scrA 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PAJPMEEK_03960 1.3e-151 sacT K transcriptional antiterminator
PAJPMEEK_03962 0.0 vpr O Belongs to the peptidase S8 family
PAJPMEEK_03963 1.2e-183 ywcH C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PAJPMEEK_03964 2.2e-54 L COG2963 Transposase and inactivated derivatives
PAJPMEEK_03965 3.6e-134 L Molecular Function DNA binding, Biological Process DNA recombination
PAJPMEEK_03966 2.7e-137 nfrA 1.5.1.38, 1.5.1.39 C Oxidoreductase
PAJPMEEK_03967 2.8e-208 rodA D Belongs to the SEDS family
PAJPMEEK_03968 9.6e-81 ysnE K acetyltransferase
PAJPMEEK_03969 1e-38 ywcE S Required for proper spore morphogenesis. Important for spore germination
PAJPMEEK_03970 6.4e-63 qoxD 1.10.3.12, 1.9.3.1 C quinol oxidase, subunit
PAJPMEEK_03971 8.1e-111 qoxC 1.10.3.12, 1.9.3.1 C quinol oxidase, subunit
PAJPMEEK_03972 0.0 qoxB 1.10.3.12, 1.9.3.1 C Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
PAJPMEEK_03973 8.3e-179 cyoA 1.10.3.10, 1.10.3.12 C Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I
PAJPMEEK_03974 8.4e-27 ywzA S membrane
PAJPMEEK_03975 1.7e-295 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PAJPMEEK_03976 1.7e-229 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PAJPMEEK_03977 9.3e-63 gtcA S GtrA-like protein
PAJPMEEK_03978 8.7e-113 ywcC K Bacterial regulatory proteins, tetR family
PAJPMEEK_03980 1.9e-129 H Methionine biosynthesis protein MetW
PAJPMEEK_03981 1.7e-133 S Streptomycin biosynthesis protein StrF
PAJPMEEK_03982 1.6e-111 ywbO Q dithiol-disulfide isomerase involved in polyketide biosynthesis
PAJPMEEK_03983 1.6e-243 ywbN P Dyp-type peroxidase family protein
PAJPMEEK_03984 5e-114 thiE 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PAJPMEEK_03985 1.5e-136 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PAJPMEEK_03986 8.2e-152 ywbI K Transcriptional regulator
PAJPMEEK_03987 2.5e-57 ywbH S Increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation. Inhibited by the antiholin-like proteins LrgAB. In an unstressed cell, the LrgAB products probably inhibit the function of the CidA protein. When a cell is stressed by the addition of antibiotics or by other factors in the environment, CidA possibly oligomerizes within the bacterial cell membrane, creating lesions that disrupt the proton motive force, which in turn results in loss of cell viability. These lesions are also hypothesized to regulate the subsequent cell lysis by either allowing the murein hydrolases access to the cell wall substrate and or regulating their activity by a
PAJPMEEK_03988 1.5e-110 ywbG M effector of murein hydrolase
PAJPMEEK_03989 1.8e-27 ywbE S Uncharacterized conserved protein (DUF2196)
PAJPMEEK_03990 2.2e-142 mta K transcriptional
PAJPMEEK_03991 9.5e-169 yjfC O Predicted Zn-dependent protease (DUF2268)
PAJPMEEK_03992 4.7e-224 ywbD 2.1.1.191 J Methyltransferase
PAJPMEEK_03993 4.5e-67 ywbC 4.4.1.5 E glyoxalase
PAJPMEEK_03994 2.4e-245 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAJPMEEK_03995 1.2e-265 epr 3.4.21.62 O Belongs to the peptidase S8 family
PAJPMEEK_03996 1.1e-163 gspA M General stress
PAJPMEEK_03997 7.8e-117 ywaC 2.7.6.5 S protein conserved in bacteria
PAJPMEEK_03998 1.3e-168 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
PAJPMEEK_03999 6.1e-12 S D-Ala-teichoic acid biosynthesis protein
PAJPMEEK_04000 6e-293 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAJPMEEK_04001 1.4e-228 dltB M membrane protein involved in D-alanine export
PAJPMEEK_04002 1.5e-36 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PAJPMEEK_04003 1.9e-193 dltD M COG3966 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PAJPMEEK_04004 1e-204 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PAJPMEEK_04005 1.6e-252 licH 3.2.1.86 GT4 G COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
PAJPMEEK_04006 7.8e-52 licA 2.7.1.196, 2.7.1.205 G phosphotransferase system
PAJPMEEK_04007 2.2e-249 licC 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAJPMEEK_04008 1.2e-49 licB 2.7.1.196, 2.7.1.205 G transporter subunit IIB
PAJPMEEK_04009 0.0 licR 2.7.1.202 GKT Mga helix-turn-helix domain
PAJPMEEK_04011 2.3e-110 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PAJPMEEK_04012 1.8e-171 fhuB3 P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PAJPMEEK_04013 5.7e-178 fhuG1 P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PAJPMEEK_04014 4e-167 cbrA3 P Periplasmic binding protein
PAJPMEEK_04015 2.2e-57 arsR K transcriptional
PAJPMEEK_04016 7.6e-228 arsB P Involved in arsenical resistance. Thought to form the channel of an arsenite pump
PAJPMEEK_04017 1.5e-49 ydhM 2.7.1.196, 2.7.1.205 G phosphotransferase system
PAJPMEEK_04018 4.1e-50 ydhN3 2.7.1.196, 2.7.1.205 G phosphotransferase system
PAJPMEEK_04019 3.7e-230 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PAJPMEEK_04020 1.3e-286 ydhP 3.2.1.21, 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PAJPMEEK_04021 6e-168 gmuE 2.7.1.2, 2.7.1.4 GK COG1940 Transcriptional regulator sugar kinase
PAJPMEEK_04022 4.3e-188 manA 5.3.1.8 G mannose-6-phosphate isomerase
PAJPMEEK_04023 8.7e-209 gmuG 3.2.1.78 GH26 G Belongs to the glycosyl hydrolase 26 family
PAJPMEEK_04024 0.0 katX 1.11.1.6 P serves to protect cells from the toxic effects of hydrogen peroxide
PAJPMEEK_04025 2.1e-193 yxeI 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
PAJPMEEK_04026 2.7e-252 yxlA F Belongs to the purine-cytosine permease (2.A.39) family
PAJPMEEK_04027 1.2e-157 nnrD 4.2.1.136, 5.1.99.6 G Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PAJPMEEK_04028 9e-293 cydD V ATP-binding protein
PAJPMEEK_04029 0.0 cydD V ATP-binding
PAJPMEEK_04030 2.5e-186 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase, subunit II
PAJPMEEK_04031 2.6e-266 cydA 1.10.3.14 C oxidase, subunit
PAJPMEEK_04032 3.4e-215 cimH C COG3493 Na citrate symporter
PAJPMEEK_04033 7.1e-158 yxkH G Polysaccharide deacetylase
PAJPMEEK_04034 1e-204 msmK P Belongs to the ABC transporter superfamily
PAJPMEEK_04035 2.1e-168 lrp QT PucR C-terminal helix-turn-helix domain
PAJPMEEK_04036 6.4e-143 yxkD S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PAJPMEEK_04037 8.4e-87 yxkC S Domain of unknown function (DUF4352)
PAJPMEEK_04038 1.3e-195 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PAJPMEEK_04039 1.6e-235 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PAJPMEEK_04042 1.8e-86 yxjI S LURP-one-related
PAJPMEEK_04043 7.4e-219 yxjG 2.1.1.14 E Methionine synthase
PAJPMEEK_04044 1.1e-161 rlmA 2.1.1.187 Q Methyltransferase domain
PAJPMEEK_04045 4.6e-211 nupG F Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PAJPMEEK_04046 7.8e-75 T Domain of unknown function (DUF4163)
PAJPMEEK_04047 4e-50 yxiS
PAJPMEEK_04048 0.0 katE 1.11.1.6, 3.5.1.124 P serves to protect cells from the toxic effects of hydrogen peroxide
PAJPMEEK_04049 3.6e-222 citH C Citrate transporter
PAJPMEEK_04050 1.5e-143 exoK GH16 M licheninase activity
PAJPMEEK_04051 5.9e-149 licT K transcriptional antiterminator
PAJPMEEK_04052 3.2e-223 yxiO S COG2270 Permeases of the major facilitator superfamily
PAJPMEEK_04053 2.1e-263 dbpA 3.6.4.13 JKL DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes
PAJPMEEK_04055 3.9e-22
PAJPMEEK_04056 2.6e-14 S YxiJ-like protein
PAJPMEEK_04058 1e-78
PAJPMEEK_04059 4.3e-33
PAJPMEEK_04062 2.6e-73 yxiG
PAJPMEEK_04063 2.1e-70 yxxG
PAJPMEEK_04065 4.2e-08
PAJPMEEK_04066 2.8e-36
PAJPMEEK_04068 2.5e-52
PAJPMEEK_04069 0.0 wapA M COG3209 Rhs family protein
PAJPMEEK_04070 5e-201 pelB 4.2.2.10, 4.2.2.2 G Pectate lyase
PAJPMEEK_04071 3.6e-147 yxxF EG EamA-like transporter family
PAJPMEEK_04072 9.8e-74 yxiE T Belongs to the universal stress protein A family
PAJPMEEK_04074 2.5e-64 K Transcriptional regulator
PAJPMEEK_04076 4e-25
PAJPMEEK_04077 3.9e-70 L Replication protein
PAJPMEEK_04078 4.1e-14 S Domain of unknown function (DUF5082)
PAJPMEEK_04079 1.8e-45 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
PAJPMEEK_04080 1.1e-182 2.1.1.37 H C-5 cytosine-specific DNA methylase
PAJPMEEK_04081 5.5e-100 S GTP binding
PAJPMEEK_04082 1.8e-71 L NgoFVII restriction endonuclease
PAJPMEEK_04083 6e-279 yxiA 3.2.1.99 GH43 G Belongs to the glycosyl hydrolase 43 family
PAJPMEEK_04084 7.7e-79 hutP K Antiterminator that binds to cis-acting regulatory sequences on the mRNA in the presence of histidine, thereby suppressing transcription termination and activating the hut operon for histidine utilization
PAJPMEEK_04085 2.3e-287 hutH 4.3.1.3 E Histidine ammonia-lyase
PAJPMEEK_04086 0.0 hutU 4.2.1.49 E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
PAJPMEEK_04087 3.2e-239 hutI 3.5.2.7 Q Imidazolone-5-propionate hydrolase
PAJPMEEK_04088 2.2e-176 hutG 3.5.3.11, 3.5.3.8 E Catalyzes the conversion of N-formimidoyl-L-glutamate to L-glutamate and formamide
PAJPMEEK_04089 2e-253 lysP E amino acid
PAJPMEEK_04090 5.1e-232 pdp 2.4.2.2, 2.4.2.4 F phosphorylase
PAJPMEEK_04091 2.3e-207 nupC F Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PAJPMEEK_04092 9.4e-113 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PAJPMEEK_04093 1.1e-172 deoR K COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
PAJPMEEK_04094 2.3e-150 yidA S hydrolases of the HAD superfamily
PAJPMEEK_04097 4.3e-09 yxeE
PAJPMEEK_04098 8.4e-23 yxeD
PAJPMEEK_04099 1e-14
PAJPMEEK_04100 7.5e-11
PAJPMEEK_04101 1e-176 fhuD P Periplasmic binding protein
PAJPMEEK_04102 2.6e-58 yxeA S Protein of unknown function (DUF1093)
PAJPMEEK_04103 0.0 yxdM V ABC transporter (permease)
PAJPMEEK_04104 6.7e-139 yxdL V ABC transporter, ATP-binding protein
PAJPMEEK_04105 3.9e-176 T PhoQ Sensor
PAJPMEEK_04106 1.6e-123 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAJPMEEK_04107 7.1e-161 iolJ 4.1.2.13, 4.1.2.29 F Produces dihydroxyacetone phosphate (DHAP or glycerone phosphate) and malonic semialdehyde (MSA or 3-oxopropanoate) from 6-phospho-5-dehydro-2-deoxy-D-gluconate (DKGP)
PAJPMEEK_04108 6.6e-148 iolI 5.3.99.11 G Involved in the reversible interconverion of 2-keto-myo- inositol (2KMI, inosose or 2,4,6 3,5-pentahydroxycyclohexanone) to 1-keto-D-chiro-inositol (1KDCI or 2,3,5 4,6- pentahydroxycyclohexanone)
PAJPMEEK_04109 1.9e-166 iolH G Xylose isomerase-like TIM barrel
PAJPMEEK_04110 5.6e-197 iolG 1.1.1.18, 1.1.1.369 S Involved in the oxidation of myo-inositol (MI) and D- chiro-inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D-chiro-inositol (1KDCI), respectively
PAJPMEEK_04111 1.2e-233 iolF EGP Major facilitator Superfamily
PAJPMEEK_04112 2.7e-176 iolE 4.2.1.44 H Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6 3,5-pentahydroxycyclohexanone) to 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol)
PAJPMEEK_04113 0.0 iolD 3.7.1.22 E Involved in the cleavage of the C1-C2 bond of 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy- glucuronate (5DG)
PAJPMEEK_04114 4.4e-183 iolC 2.7.1.92 G Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP)
PAJPMEEK_04115 1.7e-156 iolB 5.3.1.30 G Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate)
PAJPMEEK_04116 2.1e-282 iolA 1.2.1.18, 1.2.1.27 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PAJPMEEK_04117 3.1e-136 iolR K COG1349 Transcriptional regulators of sugar metabolism
PAJPMEEK_04118 4.9e-176 iolS C Aldo keto reductase
PAJPMEEK_04119 6.8e-134 L Molecular Function DNA binding, Biological Process DNA recombination
PAJPMEEK_04120 1.1e-40 L transposase activity
PAJPMEEK_04121 6.7e-246 csbC EGP Major facilitator Superfamily
PAJPMEEK_04122 0.0 htpG O Molecular chaperone. Has ATPase activity
PAJPMEEK_04124 1.4e-150 IQ Enoyl-(Acyl carrier protein) reductase
PAJPMEEK_04125 1e-102 desR T COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PAJPMEEK_04126 1e-199 desK 2.7.13.3 T Histidine kinase
PAJPMEEK_04127 3.1e-203 des 1.14.19.23, 1.14.19.45 I fatty acid desaturase
PAJPMEEK_04128 2e-219 yxbF K Bacterial regulatory proteins, tetR family
PAJPMEEK_04129 3.9e-251 alkH 1.2.1.3 C Belongs to the aldehyde dehydrogenase family
PAJPMEEK_04130 1.1e-141 S PQQ-like domain
PAJPMEEK_04131 6e-65 S Family of unknown function (DUF5391)
PAJPMEEK_04132 2.3e-50 arsR3 K helix_turn_helix, Arsenical Resistance Operon Repressor
PAJPMEEK_04133 1.4e-204 EGP Major facilitator Superfamily
PAJPMEEK_04134 1.5e-74 yxaI S membrane protein domain
PAJPMEEK_04135 2.4e-127 E Ring-cleavage extradiol dioxygenase
PAJPMEEK_04136 3.5e-22 3.4.24.84 O metalloendopeptidase activity
PAJPMEEK_04137 1.6e-91 mrr V Mrr N-terminal domain
PAJPMEEK_04138 3.2e-106 ahpC 1.11.1.15 O Alkyl hydroperoxide reductase
PAJPMEEK_04139 2.3e-287 ahpF O Alkyl hydroperoxide reductase
PAJPMEEK_04140 3.8e-229 XK27_00240 S Fic/DOC family
PAJPMEEK_04141 6.5e-246 aapA E COG1113 Gamma-aminobutyrate permease and related permeases
PAJPMEEK_04142 0.0 fbp 3.1.3.11 G Firmicute fructose-1,6-bisphosphatase
PAJPMEEK_04143 1.1e-85 pucE 1.2.5.3, 1.3.99.16 C COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs
PAJPMEEK_04144 1e-156 1.2.5.3 C COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM homologs
PAJPMEEK_04145 0.0 C COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs
PAJPMEEK_04146 4.3e-96 pucB 1.1.1.328, 1.17.1.4, 2.7.7.76 S MobA-like NTP transferase domain
PAJPMEEK_04147 9e-184 pucA 1.17.1.4 O COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
PAJPMEEK_04148 2.7e-180 S Fusaric acid resistance protein-like
PAJPMEEK_04149 1.6e-28 fbp 3.1.3.11 G Firmicute fructose-1,6-bisphosphatase
PAJPMEEK_04150 0.0 L AAA domain
PAJPMEEK_04151 1.8e-245 L Uncharacterized conserved protein (DUF2075)
PAJPMEEK_04152 5.2e-42 S MazG-like family
PAJPMEEK_04153 1.1e-256 L Superfamily I DNA and RNA helicases
PAJPMEEK_04154 0.0 L AAA ATPase domain
PAJPMEEK_04155 2.7e-158 V Restriction endonuclease
PAJPMEEK_04156 3.5e-41 3.1.21.3 L DEAD-like helicases superfamily
PAJPMEEK_04157 2.5e-68 3.1.21.3 L DEAD-like helicases superfamily
PAJPMEEK_04158 2.5e-19 cisA2 L Recombinase
PAJPMEEK_04159 1.2e-80 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PAJPMEEK_04160 7.9e-08 S YyzF-like protein
PAJPMEEK_04163 2.6e-219 yycP
PAJPMEEK_04164 9.1e-133 yycO S Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
PAJPMEEK_04165 7.1e-186 C oxidoreductases (related to aryl-alcohol dehydrogenases)
PAJPMEEK_04166 2e-85 yycN 2.3.1.128 K Acetyltransferase
PAJPMEEK_04168 2.6e-200 S Histidine kinase
PAJPMEEK_04169 1.8e-167 rocF 3.5.3.1, 3.5.3.11 E Belongs to the arginase family
PAJPMEEK_04170 2.6e-258 rocE E amino acid
PAJPMEEK_04171 4.6e-234 rocD 2.6.1.11, 2.6.1.13, 2.6.1.17 E Catalyzes the interconversion of ornithine to glutamate semialdehyde
PAJPMEEK_04172 4.2e-62 S Immunity protein that provides protection for the cell against the toxic effects of SDP, its own SdpC-derived killing factor, and that functions as a receptor signal transduction protein as well. Once SDP accumulates in the extracellular milieu, SdpI binds to SDP, causing sequestration of SdpR at the bacterial membrane
PAJPMEEK_04173 2.2e-42 sdpR K transcriptional
PAJPMEEK_04174 5.4e-259 rocR KT COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
PAJPMEEK_04175 5.3e-146 1.14.11.27 P peptidyl-arginine hydroxylation
PAJPMEEK_04176 1.1e-305 S ABC transporter
PAJPMEEK_04177 3.4e-198 S Major Facilitator Superfamily
PAJPMEEK_04178 1.4e-261
PAJPMEEK_04179 6.8e-192 2.7.7.73, 2.7.7.80 H ThiF family
PAJPMEEK_04180 1.4e-254 phoR3 2.7.13.3 T COG0642 Signal transduction histidine kinase
PAJPMEEK_04181 4.2e-11 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAJPMEEK_04182 1.2e-219 htrA 3.4.21.107 O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PAJPMEEK_04183 1.8e-150 vicX 3.1.26.11 S COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I
PAJPMEEK_04184 9.9e-152 yycI S protein conserved in bacteria
PAJPMEEK_04185 4.2e-261 yycH S protein conserved in bacteria
PAJPMEEK_04186 0.0 vicK 2.7.13.3 T Histidine kinase
PAJPMEEK_04187 1.1e-132 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PAJPMEEK_04192 1e-248 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PAJPMEEK_04193 5.3e-74 yycE 3.4.21.26, 5.3.1.24 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PAJPMEEK_04194 2.8e-252 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PAJPMEEK_04195 8e-28 yycD S Uncharacterized protein conserved in bacteria (DUF2188)
PAJPMEEK_04197 3.5e-17 yycC K YycC-like protein
PAJPMEEK_04198 2.1e-241 M Glycosyltransferase Family 4
PAJPMEEK_04199 5.1e-206 S Ecdysteroid kinase
PAJPMEEK_04200 6.5e-234 S Carbamoyl-phosphate synthase L chain, ATP binding domain
PAJPMEEK_04201 1.9e-242 M Glycosyltransferase Family 4
PAJPMEEK_04202 1.7e-122 S GlcNAc-PI de-N-acetylase
PAJPMEEK_04203 2.2e-122 KLT COG0515 Serine threonine protein kinase
PAJPMEEK_04204 1.4e-72 rplI J binds to the 23S rRNA
PAJPMEEK_04205 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PAJPMEEK_04206 4.2e-159 yybS S membrane
PAJPMEEK_04208 6.5e-85 cotF M Spore coat protein
PAJPMEEK_04209 2.8e-66 ydeP3 K Transcriptional regulator
PAJPMEEK_04210 1.7e-165 ppaC 3.6.1.1 C Inorganic pyrophosphatase
PAJPMEEK_04211 2e-155 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PAJPMEEK_04212 7e-275 sacB 2.4.1.10 GH68 M levansucrase activity
PAJPMEEK_04213 0.0 levB 3.2.1.26, 3.2.1.64, 3.2.1.65 GH32 G Belongs to the glycosyl hydrolase 32 family
PAJPMEEK_04214 9e-116 K FCD domain
PAJPMEEK_04215 1.3e-77 dinB S PFAM DinB family protein
PAJPMEEK_04216 8.9e-162 G Major Facilitator Superfamily
PAJPMEEK_04217 9.9e-163 yfiE K LysR substrate binding domain
PAJPMEEK_04218 1.1e-100 E LysE type translocator
PAJPMEEK_04219 9.6e-217 ynfM EGP Major facilitator Superfamily
PAJPMEEK_04220 2.4e-164 gltC K Transcriptional regulator
PAJPMEEK_04221 9.9e-56 ypaA S Protein of unknown function (DUF1304)
PAJPMEEK_04222 5.6e-115 drgA C nitroreductase
PAJPMEEK_04223 3.2e-69 ydgJ K Winged helix DNA-binding domain
PAJPMEEK_04224 3.8e-154 yqfU S Uncharacterized protein conserved in bacteria (DUF2179)
PAJPMEEK_04225 5.6e-77 yybA 2.3.1.57 K transcriptional
PAJPMEEK_04226 3.5e-76 yjcF S Acetyltransferase (GNAT) domain
PAJPMEEK_04227 2.3e-164 eaeH M Domain of Unknown Function (DUF1259)
PAJPMEEK_04228 2.1e-67 4.1.1.44 S Carboxymuconolactone decarboxylase family
PAJPMEEK_04229 4.9e-165 K Transcriptional regulator
PAJPMEEK_04230 8e-143 IQ Catalyzes the formation of acetoacetate from 3-hydroxybutyrate
PAJPMEEK_04231 4.6e-250 ydfD K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PAJPMEEK_04232 7.2e-132 ydfC EG EamA-like transporter family
PAJPMEEK_04233 0.0 yyaL O COG1331 Highly conserved protein containing a thioredoxin domain
PAJPMEEK_04234 1.2e-163 yyaK S CAAX protease self-immunity
PAJPMEEK_04235 1.2e-239 ydjK G Sugar (and other) transporter
PAJPMEEK_04236 5.8e-67 yyaH 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PAJPMEEK_04237 1.3e-179 ccpB 3.5.1.4, 5.1.1.1 K Transcriptional regulator
PAJPMEEK_04238 1.8e-144 xth 3.1.11.2 L exodeoxyribonuclease III
PAJPMEEK_04239 1.8e-101 adaB 2.1.1.63, 3.2.2.21 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PAJPMEEK_04240 3.9e-107 adaA 3.2.2.21 K Transcriptional regulator
PAJPMEEK_04241 3e-37 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PAJPMEEK_04242 3.8e-69 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PAJPMEEK_04243 7.3e-46 rpsF J Binds together with S18 to 16S ribosomal RNA
PAJPMEEK_04244 2.6e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PAJPMEEK_04245 0.0 yyaE C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PAJPMEEK_04246 7.8e-34 yyzM S protein conserved in bacteria
PAJPMEEK_04247 2.4e-176 yyaD S Membrane
PAJPMEEK_04248 3.4e-83 4.2.1.103 K FR47-like protein
PAJPMEEK_04249 6.2e-111 yyaC S Sporulation protein YyaC
PAJPMEEK_04250 7.9e-149 spo0J K Belongs to the ParB family
PAJPMEEK_04251 1.2e-135 soj D COG1192 ATPases involved in chromosome partitioning
PAJPMEEK_04252 1.3e-151 noc D Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage
PAJPMEEK_04253 3.2e-127 rsmG 2.1.1.170 J Specifically methylates the N7 position of guanine in position 535 of 16S rRNA
PAJPMEEK_04254 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PAJPMEEK_04255 5.2e-251 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PAJPMEEK_04256 2.5e-110 jag S single-stranded nucleic acid binding R3H
PAJPMEEK_04257 1.9e-133 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PAJPMEEK_04258 5.2e-54 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PAJPMEEK_04260 2.3e-87 S Tetratricopeptide repeat
PAJPMEEK_04261 2.3e-179 L Replication protein
PAJPMEEK_04263 5.9e-22
PAJPMEEK_04264 9e-153 pre D plasmid recombination enzyme
PAJPMEEK_04265 4.2e-67 K Transcriptional regulator

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)