ORF_ID e_value Gene_name EC_number CAZy COGs Description
PPHMHJPN_00001 9.5e-34 rmaI K Transcriptional regulator
PPHMHJPN_00002 5.4e-171 lmrB EGP Major facilitator Superfamily
PPHMHJPN_00003 1.4e-110 yjbF S SNARE associated Golgi protein
PPHMHJPN_00004 1.7e-99 J Acetyltransferase (GNAT) domain
PPHMHJPN_00005 1.8e-237 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PPHMHJPN_00006 1.1e-19 UW LPXTG-motif cell wall anchor domain protein
PPHMHJPN_00007 9.6e-45 UW LPXTG-motif cell wall anchor domain protein
PPHMHJPN_00008 9.3e-196 UW LPXTG-motif cell wall anchor domain protein
PPHMHJPN_00009 9.3e-136 UW LPXTG-motif cell wall anchor domain protein
PPHMHJPN_00010 9.7e-59 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PPHMHJPN_00011 3.5e-54 trxA O Belongs to the thioredoxin family
PPHMHJPN_00012 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PPHMHJPN_00013 1.1e-50 yrzB S Belongs to the UPF0473 family
PPHMHJPN_00014 6.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PPHMHJPN_00015 2e-42 yrzL S Belongs to the UPF0297 family
PPHMHJPN_00016 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PPHMHJPN_00017 4.7e-228 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PPHMHJPN_00018 1.4e-181 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PPHMHJPN_00019 1.6e-210 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PPHMHJPN_00020 9.6e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PPHMHJPN_00021 9.6e-41 yajC U Preprotein translocase
PPHMHJPN_00022 1.5e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PPHMHJPN_00023 1.7e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PPHMHJPN_00024 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PPHMHJPN_00025 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PPHMHJPN_00026 2.6e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PPHMHJPN_00027 1.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PPHMHJPN_00028 3.5e-75
PPHMHJPN_00029 2.3e-181 M CHAP domain
PPHMHJPN_00030 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
PPHMHJPN_00031 3.7e-295 scrB 3.2.1.26 GH32 G invertase
PPHMHJPN_00032 1.1e-183 scrR K helix_turn _helix lactose operon repressor
PPHMHJPN_00033 0.0 L Plasmid pRiA4b ORF-3-like protein
PPHMHJPN_00034 1.5e-245 brnQ U Component of the transport system for branched-chain amino acids
PPHMHJPN_00035 6.1e-151
PPHMHJPN_00036 9.8e-239 steT E amino acid
PPHMHJPN_00037 8.6e-243 steT E amino acid
PPHMHJPN_00038 4.9e-130 yfeJ 6.3.5.2 F glutamine amidotransferase
PPHMHJPN_00039 1.9e-147 glnH ET ABC transporter
PPHMHJPN_00040 1.4e-80 K Transcriptional regulator, MarR family
PPHMHJPN_00041 1.5e-308 XK27_09600 V ABC transporter, ATP-binding protein
PPHMHJPN_00042 0.0 V ABC transporter transmembrane region
PPHMHJPN_00043 8.4e-102 S ABC-type cobalt transport system, permease component
PPHMHJPN_00044 4.7e-85 G MFS/sugar transport protein
PPHMHJPN_00045 2.3e-151 G MFS/sugar transport protein
PPHMHJPN_00046 4.7e-114 udk 2.7.1.48 F Zeta toxin
PPHMHJPN_00047 1.9e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PPHMHJPN_00048 3.4e-149 glnH ET ABC transporter substrate-binding protein
PPHMHJPN_00049 9.7e-91 gluC P ABC transporter permease
PPHMHJPN_00050 6.8e-108 glnP P ABC transporter permease
PPHMHJPN_00051 1.1e-164 S Protein of unknown function (DUF2974)
PPHMHJPN_00052 4.3e-76 menA 2.5.1.74 H UbiA prenyltransferase family
PPHMHJPN_00053 7.7e-26
PPHMHJPN_00054 5.1e-91 S PFAM Archaeal ATPase
PPHMHJPN_00055 3e-90 S PFAM Archaeal ATPase
PPHMHJPN_00056 1.3e-237 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PPHMHJPN_00057 8.7e-229 S Tetratricopeptide repeat protein
PPHMHJPN_00058 2.3e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PPHMHJPN_00059 1.9e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PPHMHJPN_00060 5.5e-212 rpsA 1.17.7.4 J Ribosomal protein S1
PPHMHJPN_00061 5e-114 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PPHMHJPN_00062 2.7e-18 M Lysin motif
PPHMHJPN_00063 8.7e-114 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PPHMHJPN_00064 5.3e-84 S Protein of unknown function (DUF805)
PPHMHJPN_00065 5.6e-68 O OsmC-like protein
PPHMHJPN_00066 6.7e-207 EGP Major facilitator Superfamily
PPHMHJPN_00067 2.5e-215 sptS 2.7.13.3 T Histidine kinase
PPHMHJPN_00068 1.3e-65 K response regulator
PPHMHJPN_00069 6e-27 K response regulator
PPHMHJPN_00070 7.5e-109 2.7.6.5 T Region found in RelA / SpoT proteins
PPHMHJPN_00071 6.2e-271 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
PPHMHJPN_00072 0.0 rafA 3.2.1.22 G alpha-galactosidase
PPHMHJPN_00073 2.8e-210 msmX P Belongs to the ABC transporter superfamily
PPHMHJPN_00074 2e-152 msmG P Binding-protein-dependent transport system inner membrane component
PPHMHJPN_00075 4.8e-157 msmF P Binding-protein-dependent transport system inner membrane component
PPHMHJPN_00076 2.3e-237 msmE G Bacterial extracellular solute-binding protein
PPHMHJPN_00077 1.6e-158 scrR K Periplasmic binding protein domain
PPHMHJPN_00078 5.5e-36
PPHMHJPN_00079 2.2e-198 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PPHMHJPN_00080 6.1e-136 V ABC transporter transmembrane region
PPHMHJPN_00081 6.8e-186 G Transmembrane secretion effector
PPHMHJPN_00082 1.6e-152 fhaB M Rib/alpha-like repeat
PPHMHJPN_00083 6.8e-61 fhaB M Rib/alpha-like repeat
PPHMHJPN_00084 7.7e-22
PPHMHJPN_00085 9.3e-64 L PFAM IS66 Orf2 family protein
PPHMHJPN_00086 8.7e-34 S Transposase C of IS166 homeodomain
PPHMHJPN_00087 1.9e-245 L Transposase IS66 family
PPHMHJPN_00089 5.8e-78 M LysM domain protein
PPHMHJPN_00090 1.1e-158 D nuclear chromosome segregation
PPHMHJPN_00091 1.2e-105 G Phosphoglycerate mutase family
PPHMHJPN_00092 2.6e-89 G Histidine phosphatase superfamily (branch 1)
PPHMHJPN_00093 2.5e-118 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
PPHMHJPN_00094 1.2e-115 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PPHMHJPN_00096 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PPHMHJPN_00098 6.5e-210 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
PPHMHJPN_00099 2.7e-185 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
PPHMHJPN_00100 8.1e-120 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PPHMHJPN_00101 4.4e-144 K SIS domain
PPHMHJPN_00102 6.7e-228 slpX S SLAP domain
PPHMHJPN_00103 3.7e-22 3.6.4.12 S transposase or invertase
PPHMHJPN_00104 7.7e-12
PPHMHJPN_00105 1.1e-240 npr 1.11.1.1 C NADH oxidase
PPHMHJPN_00108 1.9e-300 oppA2 E ABC transporter, substratebinding protein
PPHMHJPN_00109 2.5e-179
PPHMHJPN_00110 1.8e-122 gntR1 K UTRA
PPHMHJPN_00111 5.1e-71 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
PPHMHJPN_00112 8.4e-148 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PPHMHJPN_00113 2.9e-121 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PPHMHJPN_00114 3e-139 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PPHMHJPN_00115 1.2e-161 phnD P Phosphonate ABC transporter
PPHMHJPN_00117 8.8e-84 uspA T universal stress protein
PPHMHJPN_00118 9.8e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
PPHMHJPN_00119 1.7e-87 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PPHMHJPN_00120 3.6e-90 ntd 2.4.2.6 F Nucleoside
PPHMHJPN_00121 5.2e-08
PPHMHJPN_00122 5.4e-13
PPHMHJPN_00123 3e-215 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PPHMHJPN_00124 0.0 G Belongs to the glycosyl hydrolase 31 family
PPHMHJPN_00125 2e-117 S Peptidase family M23
PPHMHJPN_00126 1e-104 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PPHMHJPN_00127 2.2e-69 lysA2 M Glycosyl hydrolases family 25
PPHMHJPN_00131 6.4e-55 E GDSL-like Lipase/Acylhydrolase
PPHMHJPN_00134 8.9e-113 S Phage minor structural protein
PPHMHJPN_00135 2.3e-49 S Phage minor structural protein
PPHMHJPN_00136 1.1e-37 S phage tail
PPHMHJPN_00137 7e-158 M Phage tail tape measure protein TP901
PPHMHJPN_00140 1e-25 S Phage tail tube protein
PPHMHJPN_00141 8.1e-13 S Protein of unknown function (DUF806)
PPHMHJPN_00142 4.1e-23 S Bacteriophage HK97-gp10, putative tail-component
PPHMHJPN_00144 7.3e-17 S Phage gp6-like head-tail connector protein
PPHMHJPN_00145 3.5e-50 S peptidase activity
PPHMHJPN_00146 1.4e-74 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
PPHMHJPN_00147 7e-83 S Phage portal protein
PPHMHJPN_00149 4.4e-40 ropB K Helix-turn-helix domain
PPHMHJPN_00150 6.2e-111 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PPHMHJPN_00151 6.6e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PPHMHJPN_00152 1.1e-71 yslB S Protein of unknown function (DUF2507)
PPHMHJPN_00153 1.4e-127 S Peptidase family M23
PPHMHJPN_00154 4.8e-81 mutT 3.6.1.55 F NUDIX domain
PPHMHJPN_00155 3.5e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
PPHMHJPN_00156 1.4e-152 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PPHMHJPN_00157 1.7e-240 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PPHMHJPN_00158 1.4e-60 yvoA_1 K Transcriptional regulator, GntR family
PPHMHJPN_00159 2.8e-123 skfE V ATPases associated with a variety of cellular activities
PPHMHJPN_00160 4.5e-141
PPHMHJPN_00161 5.1e-137
PPHMHJPN_00162 6.7e-145
PPHMHJPN_00163 1.4e-26
PPHMHJPN_00164 3.9e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PPHMHJPN_00165 7.5e-143
PPHMHJPN_00166 9.7e-169
PPHMHJPN_00167 8.3e-265 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
PPHMHJPN_00168 1.3e-116 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
PPHMHJPN_00169 6.9e-184 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PPHMHJPN_00170 2.1e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PPHMHJPN_00171 1.4e-178 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PPHMHJPN_00172 4.8e-136 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
PPHMHJPN_00173 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PPHMHJPN_00174 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PPHMHJPN_00175 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PPHMHJPN_00176 9.2e-89 ypmB S Protein conserved in bacteria
PPHMHJPN_00177 1.5e-260 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PPHMHJPN_00178 1.3e-114 dnaD L DnaD domain protein
PPHMHJPN_00179 6.1e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PPHMHJPN_00180 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PPHMHJPN_00181 4.5e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PPHMHJPN_00182 1e-107 ypsA S Belongs to the UPF0398 family
PPHMHJPN_00183 1.1e-68 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PPHMHJPN_00184 1.6e-218 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PPHMHJPN_00185 1e-242 cpdA S Calcineurin-like phosphoesterase
PPHMHJPN_00186 3.4e-79
PPHMHJPN_00187 4e-60 L Resolvase, N terminal domain
PPHMHJPN_00188 4.6e-25 dnaQ 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
PPHMHJPN_00189 7.8e-102 L An automated process has identified a potential problem with this gene model
PPHMHJPN_00190 1.8e-132 infB M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PPHMHJPN_00191 1.4e-69 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PPHMHJPN_00192 1.5e-225 N Uncharacterized conserved protein (DUF2075)
PPHMHJPN_00193 4.8e-205 pbpX1 V Beta-lactamase
PPHMHJPN_00194 0.0 L Helicase C-terminal domain protein
PPHMHJPN_00195 1.3e-273 E amino acid
PPHMHJPN_00196 1.8e-158 xth 3.1.11.2 L exodeoxyribonuclease III
PPHMHJPN_00199 1.4e-192 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PPHMHJPN_00200 7.6e-134 EGP Major facilitator Superfamily
PPHMHJPN_00201 4e-150 3.1.3.102, 3.1.3.104 S haloacid dehalogenase-like hydrolase
PPHMHJPN_00202 0.0 tetP J elongation factor G
PPHMHJPN_00203 1.2e-160 yvgN C Aldo keto reductase
PPHMHJPN_00204 2e-155 P CorA-like Mg2+ transporter protein
PPHMHJPN_00205 5.6e-132 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PPHMHJPN_00206 1.7e-174 ABC-SBP S ABC transporter
PPHMHJPN_00207 5.6e-121 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PPHMHJPN_00208 2.4e-136 XK27_08845 S ABC transporter, ATP-binding protein
PPHMHJPN_00209 5.2e-248 G Major Facilitator
PPHMHJPN_00210 4.1e-18
PPHMHJPN_00211 2.6e-103 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
PPHMHJPN_00212 6.4e-177 K AI-2E family transporter
PPHMHJPN_00213 2.7e-109 oppA E ABC transporter substrate-binding protein
PPHMHJPN_00214 1.2e-210 oppA E ABC transporter substrate-binding protein
PPHMHJPN_00215 5.2e-117 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PPHMHJPN_00216 1.8e-71 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PPHMHJPN_00217 9.6e-28 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PPHMHJPN_00218 1.3e-84 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PPHMHJPN_00219 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PPHMHJPN_00220 5.7e-106 2.4.1.58 GT8 M family 8
PPHMHJPN_00221 1.2e-35 M lipopolysaccharide 3-alpha-galactosyltransferase activity
PPHMHJPN_00222 2.8e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PPHMHJPN_00223 2.4e-107 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PPHMHJPN_00224 1.1e-34 S Protein of unknown function (DUF2508)
PPHMHJPN_00225 7.6e-112 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PPHMHJPN_00226 2.2e-51 yaaQ S Cyclic-di-AMP receptor
PPHMHJPN_00227 3.7e-154 holB 2.7.7.7 L DNA polymerase III
PPHMHJPN_00228 1.8e-59 yabA L Involved in initiation control of chromosome replication
PPHMHJPN_00229 1.5e-155 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PPHMHJPN_00230 2.1e-129 fat 3.1.2.21 I Acyl-ACP thioesterase
PPHMHJPN_00231 2.2e-85 S ECF transporter, substrate-specific component
PPHMHJPN_00232 8.2e-134 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PPHMHJPN_00233 4.8e-96 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PPHMHJPN_00234 1.5e-194 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PPHMHJPN_00235 1.3e-51 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PPHMHJPN_00236 3.2e-170 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PPHMHJPN_00237 5.3e-285 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
PPHMHJPN_00238 0.0 uup S ABC transporter, ATP-binding protein
PPHMHJPN_00239 5.8e-112 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PPHMHJPN_00240 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PPHMHJPN_00241 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PPHMHJPN_00242 1.7e-29 secG U Preprotein translocase
PPHMHJPN_00243 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PPHMHJPN_00244 8.3e-177 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PPHMHJPN_00245 9.9e-202 cpoA GT4 M Glycosyltransferase, group 1 family protein
PPHMHJPN_00246 7.9e-224 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
PPHMHJPN_00257 2e-210 S Uncharacterized protein conserved in bacteria (DUF2325)
PPHMHJPN_00258 8.6e-221 G Bacterial extracellular solute-binding protein
PPHMHJPN_00259 1.3e-161 2.7.7.12 C Domain of unknown function (DUF4931)
PPHMHJPN_00260 5.4e-167 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PPHMHJPN_00261 3.4e-126 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PPHMHJPN_00262 0.0 kup P Transport of potassium into the cell
PPHMHJPN_00263 9.1e-175 rihB 3.2.2.1 F Nucleoside
PPHMHJPN_00264 2.8e-134 ydhQ K UbiC transcription regulator-associated domain protein
PPHMHJPN_00265 1e-153 S hydrolase
PPHMHJPN_00266 2.5e-59 S Enterocin A Immunity
PPHMHJPN_00267 3.1e-136 glcR K DeoR C terminal sensor domain
PPHMHJPN_00268 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PPHMHJPN_00269 2e-160 rssA S Phospholipase, patatin family
PPHMHJPN_00270 5.4e-147 S hydrolase
PPHMHJPN_00271 0.0 glvC 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
PPHMHJPN_00272 4.1e-147 glvR K Helix-turn-helix domain, rpiR family
PPHMHJPN_00273 1.6e-80
PPHMHJPN_00274 2.9e-87 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PPHMHJPN_00275 2.1e-39
PPHMHJPN_00276 3.9e-119 C nitroreductase
PPHMHJPN_00277 1.7e-249 yhdP S Transporter associated domain
PPHMHJPN_00278 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PPHMHJPN_00279 0.0 1.3.5.4 C FAD binding domain
PPHMHJPN_00280 2.9e-88 L PFAM transposase, IS4 family protein
PPHMHJPN_00281 2e-49 L PFAM transposase, IS4 family protein
PPHMHJPN_00282 0.0 1.3.5.4 C FAD binding domain
PPHMHJPN_00283 2.8e-230 potE E amino acid
PPHMHJPN_00284 0.0 snf 2.7.11.1 KL domain protein
PPHMHJPN_00285 3.5e-109 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PPHMHJPN_00286 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PPHMHJPN_00287 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PPHMHJPN_00288 5.6e-183 K Transcriptional regulator
PPHMHJPN_00289 2.1e-171 ppaC 3.6.1.1 C inorganic pyrophosphatase
PPHMHJPN_00290 2.7e-111 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PPHMHJPN_00291 4e-57 K Helix-turn-helix domain
PPHMHJPN_00292 2.7e-146 I alpha/beta hydrolase fold
PPHMHJPN_00293 4.9e-129 yibF S overlaps another CDS with the same product name
PPHMHJPN_00294 2.2e-202 yibE S overlaps another CDS with the same product name
PPHMHJPN_00295 1.4e-112
PPHMHJPN_00296 1.2e-205 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PPHMHJPN_00297 6.4e-224 S Cysteine-rich secretory protein family
PPHMHJPN_00298 2.6e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PPHMHJPN_00299 1.1e-257 glnPH2 P ABC transporter permease
PPHMHJPN_00300 2.8e-135
PPHMHJPN_00301 8.4e-125 luxT K Bacterial regulatory proteins, tetR family
PPHMHJPN_00302 3.3e-183 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PPHMHJPN_00303 4.7e-38
PPHMHJPN_00304 9.3e-86
PPHMHJPN_00305 1.2e-282 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PPHMHJPN_00306 7.7e-182 S Alpha/beta hydrolase of unknown function (DUF915)
PPHMHJPN_00307 3e-147 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PPHMHJPN_00308 4.4e-140 ypuA S Protein of unknown function (DUF1002)
PPHMHJPN_00309 3.7e-156 epsV 2.7.8.12 S glycosyl transferase family 2
PPHMHJPN_00310 7.3e-126 S Alpha/beta hydrolase family
PPHMHJPN_00311 2e-39 S Transglycosylase associated protein
PPHMHJPN_00312 1.5e-211 M Glycosyl hydrolases family 25
PPHMHJPN_00313 8e-111 XK27_00160 S Domain of unknown function (DUF5052)
PPHMHJPN_00314 4.1e-67
PPHMHJPN_00315 5.4e-203 xerS L Belongs to the 'phage' integrase family
PPHMHJPN_00316 1.5e-304 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PPHMHJPN_00317 1.3e-159 degV S EDD domain protein, DegV family
PPHMHJPN_00318 1.1e-66
PPHMHJPN_00319 0.0 FbpA K Fibronectin-binding protein
PPHMHJPN_00320 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
PPHMHJPN_00321 1e-198 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PPHMHJPN_00322 4.3e-169 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PPHMHJPN_00323 1.4e-78 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PPHMHJPN_00324 2.3e-285 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PPHMHJPN_00325 5.5e-53
PPHMHJPN_00327 2.7e-34 S YSIRK type signal peptide
PPHMHJPN_00328 1.9e-110 F DNA/RNA non-specific endonuclease
PPHMHJPN_00329 2e-75 S cog cog0433
PPHMHJPN_00330 1.2e-126 K response regulator
PPHMHJPN_00331 1.3e-277 arlS 2.7.13.3 T Histidine kinase
PPHMHJPN_00332 1e-12
PPHMHJPN_00333 9.2e-100 S CAAX protease self-immunity
PPHMHJPN_00334 6.1e-224 S SLAP domain
PPHMHJPN_00335 1.3e-82 S Aminoacyl-tRNA editing domain
PPHMHJPN_00336 2.2e-163 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PPHMHJPN_00337 2.4e-43 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PPHMHJPN_00338 7.7e-135 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PPHMHJPN_00339 4.5e-58 yodB K Transcriptional regulator, HxlR family
PPHMHJPN_00341 2.7e-107 papP P ABC transporter, permease protein
PPHMHJPN_00342 5.3e-116 P ABC transporter permease
PPHMHJPN_00343 3.3e-127 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PPHMHJPN_00344 6.2e-157 cjaA ET ABC transporter substrate-binding protein
PPHMHJPN_00345 7.1e-200 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PPHMHJPN_00346 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PPHMHJPN_00347 4.9e-63 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PPHMHJPN_00348 3.7e-168 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
PPHMHJPN_00349 3.8e-136 metQ1 P Belongs to the nlpA lipoprotein family
PPHMHJPN_00350 1.9e-25
PPHMHJPN_00351 0.0 mco Q Multicopper oxidase
PPHMHJPN_00352 1.2e-151 S Sucrose-6F-phosphate phosphohydrolase
PPHMHJPN_00353 0.0 oppA E ABC transporter
PPHMHJPN_00354 3.4e-73 Q Imidazolonepropionase and related amidohydrolases
PPHMHJPN_00355 3.7e-148 Q Imidazolonepropionase and related amidohydrolases
PPHMHJPN_00356 1.4e-245 3.5.1.47 S Peptidase dimerisation domain
PPHMHJPN_00357 3e-137 S Protein of unknown function (DUF3100)
PPHMHJPN_00358 5.7e-46 S An automated process has identified a potential problem with this gene model
PPHMHJPN_00359 2.9e-53 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PPHMHJPN_00360 2.2e-113 S SLAP domain
PPHMHJPN_00361 4.7e-188 K Periplasmic binding protein-like domain
PPHMHJPN_00362 2e-106 K Transcriptional regulator, AbiEi antitoxin
PPHMHJPN_00363 6.4e-162 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
PPHMHJPN_00364 4.5e-188 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PPHMHJPN_00365 7e-146 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
PPHMHJPN_00366 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PPHMHJPN_00367 3.2e-165 lacR K Transcriptional regulator
PPHMHJPN_00368 0.0 lacS G Transporter
PPHMHJPN_00369 0.0 lacZ 3.2.1.23 G -beta-galactosidase
PPHMHJPN_00370 2.1e-221 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PPHMHJPN_00371 2e-288 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PPHMHJPN_00372 1e-48 S Metal binding domain of Ada
PPHMHJPN_00373 0.0 mgtA 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
PPHMHJPN_00374 1.2e-136 lysR5 K LysR substrate binding domain
PPHMHJPN_00375 8.8e-234 arcA 3.5.3.6 E Arginine
PPHMHJPN_00376 4.3e-66 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PPHMHJPN_00377 2e-105 argF 2.1.3.3, 2.7.2.2 E Belongs to the carbamate kinase family
PPHMHJPN_00378 9.2e-95 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PPHMHJPN_00379 2.3e-215 S Sterol carrier protein domain
PPHMHJPN_00380 1e-20
PPHMHJPN_00381 4.9e-108 K LysR substrate binding domain
PPHMHJPN_00382 9e-98
PPHMHJPN_00383 3e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
PPHMHJPN_00384 1.4e-94
PPHMHJPN_00385 3.9e-58
PPHMHJPN_00386 2.5e-119 K helix_turn_helix, mercury resistance
PPHMHJPN_00387 2.6e-86 pbuG S permease
PPHMHJPN_00388 1.8e-128 pbuG S permease
PPHMHJPN_00389 2.5e-40 relB L Addiction module antitoxin, RelB DinJ family
PPHMHJPN_00390 3.1e-16 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
PPHMHJPN_00391 1.8e-48 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
PPHMHJPN_00392 1.3e-94 K Transcriptional regulator
PPHMHJPN_00393 6.1e-61 K Transcriptional regulator
PPHMHJPN_00394 2e-225 S cog cog1373
PPHMHJPN_00395 9.7e-146 S haloacid dehalogenase-like hydrolase
PPHMHJPN_00396 2.5e-226 pbuG S permease
PPHMHJPN_00397 2.8e-86 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PPHMHJPN_00398 1.8e-125 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PPHMHJPN_00399 6.2e-12
PPHMHJPN_00400 1.2e-171 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
PPHMHJPN_00401 2.3e-30
PPHMHJPN_00403 2.9e-69 S Iron-sulphur cluster biosynthesis
PPHMHJPN_00404 6.5e-113 yncA 2.3.1.79 S Maltose acetyltransferase
PPHMHJPN_00405 6.2e-59 psiE S Phosphate-starvation-inducible E
PPHMHJPN_00407 1.2e-42 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PPHMHJPN_00408 2.9e-85 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PPHMHJPN_00409 4.3e-228 amtB P ammonium transporter
PPHMHJPN_00410 1.4e-60
PPHMHJPN_00411 0.0 lhr L DEAD DEAH box helicase
PPHMHJPN_00412 3.5e-244 P P-loop Domain of unknown function (DUF2791)
PPHMHJPN_00413 0.0 S TerB-C domain
PPHMHJPN_00414 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
PPHMHJPN_00415 3.9e-298 V ABC transporter transmembrane region
PPHMHJPN_00416 2.3e-156 K Helix-turn-helix XRE-family like proteins
PPHMHJPN_00417 3.7e-59 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
PPHMHJPN_00418 2.1e-32
PPHMHJPN_00419 1.4e-78 4.1.1.44 S Carboxymuconolactone decarboxylase family
PPHMHJPN_00420 3.2e-28 4.1.1.44 S Carboxymuconolactone decarboxylase family
PPHMHJPN_00421 1e-218 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
PPHMHJPN_00422 2.1e-79 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PPHMHJPN_00423 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
PPHMHJPN_00424 0.0 mtlR K Mga helix-turn-helix domain
PPHMHJPN_00425 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PPHMHJPN_00426 6.8e-184 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PPHMHJPN_00427 8e-282 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PPHMHJPN_00428 1.7e-241 cycA E Amino acid permease
PPHMHJPN_00429 1.3e-85 maa S transferase hexapeptide repeat
PPHMHJPN_00430 3.3e-158 K Transcriptional regulator
PPHMHJPN_00431 1.1e-62 manO S Domain of unknown function (DUF956)
PPHMHJPN_00432 1e-173 manN G system, mannose fructose sorbose family IID component
PPHMHJPN_00433 1.7e-129 manY G PTS system
PPHMHJPN_00434 2.5e-186 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PPHMHJPN_00435 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PPHMHJPN_00436 3.5e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PPHMHJPN_00437 8.4e-146 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PPHMHJPN_00438 2.1e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PPHMHJPN_00439 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PPHMHJPN_00440 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PPHMHJPN_00441 1.6e-31
PPHMHJPN_00442 3.1e-275 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PPHMHJPN_00443 3.9e-287 clcA P chloride
PPHMHJPN_00444 3.6e-33 E Zn peptidase
PPHMHJPN_00445 3.7e-58 ps115 K Helix-turn-helix XRE-family like proteins
PPHMHJPN_00446 5.7e-44
PPHMHJPN_00447 1.1e-106 S Bacteriocin helveticin-J
PPHMHJPN_00448 1.3e-117 S SLAP domain
PPHMHJPN_00449 3.5e-136 S SLAP domain
PPHMHJPN_00450 2.8e-210
PPHMHJPN_00451 1.2e-18
PPHMHJPN_00452 7e-248 EGP Sugar (and other) transporter
PPHMHJPN_00453 1.2e-105
PPHMHJPN_00454 8.2e-114 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
PPHMHJPN_00455 0.0 copA 3.6.3.54 P P-type ATPase
PPHMHJPN_00456 1.8e-44 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PPHMHJPN_00457 7.8e-56 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PPHMHJPN_00458 8.1e-37
PPHMHJPN_00461 1.8e-31
PPHMHJPN_00462 1.1e-139
PPHMHJPN_00463 3.7e-261 V ABC transporter transmembrane region
PPHMHJPN_00464 1.4e-37 S Putative adhesin
PPHMHJPN_00465 5.6e-179 S PFAM Archaeal ATPase
PPHMHJPN_00466 1.8e-193 I transferase activity, transferring acyl groups other than amino-acyl groups
PPHMHJPN_00467 7.4e-128 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PPHMHJPN_00468 1.6e-140 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PPHMHJPN_00469 2.9e-78 G Phosphoglycerate mutase family
PPHMHJPN_00470 8.9e-10 G Phosphoglycerate mutase family
PPHMHJPN_00471 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PPHMHJPN_00472 6.5e-151 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PPHMHJPN_00473 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PPHMHJPN_00474 7.2e-56 yheA S Belongs to the UPF0342 family
PPHMHJPN_00475 1.5e-230 yhaO L Ser Thr phosphatase family protein
PPHMHJPN_00476 0.0 L AAA domain
PPHMHJPN_00477 1.9e-186 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
PPHMHJPN_00478 2.9e-23
PPHMHJPN_00479 2.4e-51 S Domain of unknown function DUF1829
PPHMHJPN_00480 1e-45
PPHMHJPN_00481 2.6e-175
PPHMHJPN_00482 1.5e-72 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
PPHMHJPN_00483 1.5e-153 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PPHMHJPN_00484 3.9e-25
PPHMHJPN_00485 8.3e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
PPHMHJPN_00486 1.7e-134 ecsA V ABC transporter, ATP-binding protein
PPHMHJPN_00487 2.9e-221 ecsB U ABC transporter
PPHMHJPN_00488 3.3e-126 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PPHMHJPN_00489 1e-95
PPHMHJPN_00490 7.8e-78 2.5.1.74 H UbiA prenyltransferase family
PPHMHJPN_00492 8.7e-117 3.2.1.18 GH33 M Rib/alpha-like repeat
PPHMHJPN_00493 4.9e-99 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PPHMHJPN_00495 7.8e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PPHMHJPN_00496 2.4e-43 K Helix-turn-helix
PPHMHJPN_00497 3.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PPHMHJPN_00498 1.4e-226 pbuX F xanthine permease
PPHMHJPN_00499 2.5e-152 msmR K AraC-like ligand binding domain
PPHMHJPN_00500 4.4e-285 pipD E Dipeptidase
PPHMHJPN_00501 1.3e-47 adk 2.7.4.3 F AAA domain
PPHMHJPN_00502 2.1e-80 K acetyltransferase
PPHMHJPN_00503 1.4e-245 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PPHMHJPN_00504 2.7e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PPHMHJPN_00505 1.8e-47 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PPHMHJPN_00506 4.5e-68 S Domain of unknown function (DUF1934)
PPHMHJPN_00507 0.0 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PPHMHJPN_00508 2e-37 scrR K Periplasmic binding protein domain
PPHMHJPN_00509 2.8e-33 scrR K Periplasmic binding protein domain
PPHMHJPN_00510 1.9e-138 2.4.2.3 F Phosphorylase superfamily
PPHMHJPN_00511 9e-144 2.4.2.3 F Phosphorylase superfamily
PPHMHJPN_00512 1.4e-150 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
PPHMHJPN_00513 9.9e-82 C Flavodoxin
PPHMHJPN_00514 0.0 uvrA3 L excinuclease ABC, A subunit
PPHMHJPN_00515 1.1e-189 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PPHMHJPN_00516 2.1e-114 3.6.1.27 I Acid phosphatase homologues
PPHMHJPN_00517 7.1e-63 M LysM domain protein
PPHMHJPN_00518 1.1e-86 C Aldo keto reductase
PPHMHJPN_00519 4.8e-181 lacX 5.1.3.3 G Aldose 1-epimerase
PPHMHJPN_00520 8.2e-236 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PPHMHJPN_00521 1.9e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PPHMHJPN_00522 6.5e-141 xerC D Phage integrase, N-terminal SAM-like domain
PPHMHJPN_00523 1.4e-248 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PPHMHJPN_00524 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PPHMHJPN_00525 5.8e-152 dprA LU DNA protecting protein DprA
PPHMHJPN_00526 4.6e-132 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PPHMHJPN_00527 2.8e-154 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PPHMHJPN_00528 1.9e-94 yjcE P Sodium proton antiporter
PPHMHJPN_00529 1.5e-40 yjcE P Sodium proton antiporter
PPHMHJPN_00530 1.1e-66 yjcE P NhaP-type Na H and K H
PPHMHJPN_00531 7.1e-36 yozE S Belongs to the UPF0346 family
PPHMHJPN_00532 2e-144 DegV S Uncharacterised protein, DegV family COG1307
PPHMHJPN_00533 1.2e-107 hlyIII S protein, hemolysin III
PPHMHJPN_00534 1.1e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PPHMHJPN_00535 4.6e-160 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PPHMHJPN_00536 4.3e-86 3.4.21.96 S SLAP domain
PPHMHJPN_00537 8.4e-128 yagE E Amino acid permease
PPHMHJPN_00538 9.7e-65 yagE E amino acid
PPHMHJPN_00539 1.1e-259 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
PPHMHJPN_00540 2.1e-28 S Peptidase propeptide and YPEB domain
PPHMHJPN_00541 2.4e-60 ypaA S Protein of unknown function (DUF1304)
PPHMHJPN_00542 2.3e-309 oppA3 E ABC transporter, substratebinding protein
PPHMHJPN_00543 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PPHMHJPN_00544 5.1e-245 ynbB 4.4.1.1 P aluminum resistance
PPHMHJPN_00545 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PPHMHJPN_00546 3.2e-283 E Amino acid permease
PPHMHJPN_00547 1.6e-93 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
PPHMHJPN_00548 1.2e-271 pepV 3.5.1.18 E dipeptidase PepV
PPHMHJPN_00549 1.4e-115 mmuP E amino acid
PPHMHJPN_00550 5e-13 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PPHMHJPN_00551 1e-63 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PPHMHJPN_00552 3e-66 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PPHMHJPN_00553 3.1e-150 xerD L Phage integrase, N-terminal SAM-like domain
PPHMHJPN_00554 8.8e-58 S Peptidase propeptide and YPEB domain
PPHMHJPN_00555 1.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PPHMHJPN_00556 7.4e-169 coaA 2.7.1.33 F Pantothenic acid kinase
PPHMHJPN_00557 7.9e-97 E GDSL-like Lipase/Acylhydrolase
PPHMHJPN_00558 7.5e-74 yjcF S Acetyltransferase (GNAT) domain
PPHMHJPN_00559 1.6e-143 aatB ET ABC transporter substrate-binding protein
PPHMHJPN_00560 1e-105 glnQ 3.6.3.21 E ABC transporter
PPHMHJPN_00561 1.5e-107 glnP P ABC transporter permease
PPHMHJPN_00562 0.0 helD 3.6.4.12 L DNA helicase
PPHMHJPN_00563 2.3e-116 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
PPHMHJPN_00564 1.4e-126 pgm3 G Phosphoglycerate mutase family
PPHMHJPN_00565 1.2e-241 S response to antibiotic
PPHMHJPN_00566 3.2e-124
PPHMHJPN_00567 0.0 3.6.3.8 P P-type ATPase
PPHMHJPN_00568 4.3e-65 2.7.1.191 G PTS system fructose IIA component
PPHMHJPN_00569 1.3e-42
PPHMHJPN_00570 5.9e-09
PPHMHJPN_00571 3.4e-27
PPHMHJPN_00572 8e-22 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
PPHMHJPN_00573 5.4e-53 hipB K sequence-specific DNA binding
PPHMHJPN_00574 4.8e-42 S SnoaL-like domain
PPHMHJPN_00575 0.0 L PLD-like domain
PPHMHJPN_00576 9.6e-103 pgm3 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
PPHMHJPN_00577 8.8e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
PPHMHJPN_00578 2.6e-280 thrC 4.2.3.1 E Threonine synthase
PPHMHJPN_00579 6.6e-221 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
PPHMHJPN_00580 2.8e-157 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PPHMHJPN_00581 2.5e-118
PPHMHJPN_00582 4.6e-160 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PPHMHJPN_00584 2.3e-08 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PPHMHJPN_00585 3.1e-122 L Belongs to the 'phage' integrase family
PPHMHJPN_00586 1.6e-180 V Abi-like protein
PPHMHJPN_00589 2.5e-30 S Hypothetical protein (DUF2513)
PPHMHJPN_00590 6.2e-74 3.4.21.88 K Peptidase S24-like
PPHMHJPN_00591 2.3e-10 K Helix-turn-helix XRE-family like proteins
PPHMHJPN_00599 1.1e-20 L Psort location Cytoplasmic, score
PPHMHJPN_00602 1.3e-09
PPHMHJPN_00603 1.1e-24 S HNH endonuclease
PPHMHJPN_00608 1e-83 ps308 K AntA/AntB antirepressor
PPHMHJPN_00614 1.1e-08
PPHMHJPN_00615 7.8e-62 L HNH nucleases
PPHMHJPN_00616 9.3e-56 L Phage terminase, small subunit
PPHMHJPN_00619 1.8e-217 S Phage Terminase
PPHMHJPN_00621 2.7e-16 S Phage portal protein
PPHMHJPN_00622 1.6e-61
PPHMHJPN_00623 1.1e-248 celD G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PPHMHJPN_00624 3.2e-71 S Domain of unknown function (DUF3284)
PPHMHJPN_00625 5.4e-302 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PPHMHJPN_00626 4.2e-119 gmuR K UTRA
PPHMHJPN_00627 3.7e-223 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PPHMHJPN_00628 5.8e-274 bglA3 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PPHMHJPN_00629 9.2e-137 ypbG 2.7.1.2 GK ROK family
PPHMHJPN_00630 4.4e-36 C nitroreductase
PPHMHJPN_00631 8e-38 C nitroreductase
PPHMHJPN_00632 7.5e-91 S Domain of unknown function (DUF4767)
PPHMHJPN_00633 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PPHMHJPN_00634 2.2e-151 yitS S Uncharacterised protein, DegV family COG1307
PPHMHJPN_00635 4.6e-100 3.6.1.27 I Acid phosphatase homologues
PPHMHJPN_00636 4.2e-178 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PPHMHJPN_00638 1.6e-172 MA20_14895 S Conserved hypothetical protein 698
PPHMHJPN_00639 6.3e-26 XK26_02160 S Pyridoxamine 5'-phosphate oxidase
PPHMHJPN_00640 1.9e-30 XK26_02160 S Pyridoxamine 5'-phosphate oxidase
PPHMHJPN_00641 1e-284 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
PPHMHJPN_00642 1.2e-30 copZ C Heavy-metal-associated domain
PPHMHJPN_00643 1.6e-78 dps P Belongs to the Dps family
PPHMHJPN_00644 1.9e-86 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
PPHMHJPN_00645 2e-129 yobV1 K WYL domain
PPHMHJPN_00646 1.8e-55 S pyridoxamine 5-phosphate
PPHMHJPN_00647 3.8e-84 dps P Belongs to the Dps family
PPHMHJPN_00648 2.8e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PPHMHJPN_00649 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PPHMHJPN_00650 1.1e-36 S Alpha beta hydrolase
PPHMHJPN_00651 2.3e-65 S Alpha beta hydrolase
PPHMHJPN_00652 1.9e-37
PPHMHJPN_00653 2.6e-52
PPHMHJPN_00654 4e-113 S haloacid dehalogenase-like hydrolase
PPHMHJPN_00655 2e-291 V ABC-type multidrug transport system, ATPase and permease components
PPHMHJPN_00656 4.1e-276 V ABC-type multidrug transport system, ATPase and permease components
PPHMHJPN_00657 1.5e-64 arsC 1.20.4.1 P Belongs to the ArsC family
PPHMHJPN_00658 2.9e-178 I Carboxylesterase family
PPHMHJPN_00660 1.7e-205 M Glycosyl hydrolases family 25
PPHMHJPN_00661 1.3e-157 cinI S Serine hydrolase (FSH1)
PPHMHJPN_00662 2.7e-300 S Predicted membrane protein (DUF2207)
PPHMHJPN_00663 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PPHMHJPN_00666 3.3e-303 L Transposase
PPHMHJPN_00667 7.8e-255 S Uncharacterized protein conserved in bacteria (DUF2325)
PPHMHJPN_00668 3.7e-151 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PPHMHJPN_00669 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
PPHMHJPN_00670 7.8e-48 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PPHMHJPN_00671 1e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PPHMHJPN_00672 4.9e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PPHMHJPN_00673 1.7e-70 yqhY S Asp23 family, cell envelope-related function
PPHMHJPN_00674 2.1e-64 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PPHMHJPN_00675 2.2e-143 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PPHMHJPN_00676 7.6e-186 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PPHMHJPN_00677 1.1e-34 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PPHMHJPN_00678 2.4e-153 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PPHMHJPN_00679 2.2e-148 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PPHMHJPN_00680 8.8e-293 recN L May be involved in recombinational repair of damaged DNA
PPHMHJPN_00681 1.1e-77 6.3.3.2 S ASCH
PPHMHJPN_00682 2.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PPHMHJPN_00683 1.1e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PPHMHJPN_00684 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PPHMHJPN_00685 1.6e-171 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PPHMHJPN_00686 1.6e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PPHMHJPN_00687 1.3e-139 stp 3.1.3.16 T phosphatase
PPHMHJPN_00688 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
PPHMHJPN_00689 4.1e-164 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PPHMHJPN_00690 1.7e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PPHMHJPN_00691 2.4e-124 thiN 2.7.6.2 H thiamine pyrophosphokinase
PPHMHJPN_00692 1.1e-30
PPHMHJPN_00693 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PPHMHJPN_00694 4e-57 asp S Asp23 family, cell envelope-related function
PPHMHJPN_00695 2e-305 yloV S DAK2 domain fusion protein YloV
PPHMHJPN_00696 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PPHMHJPN_00697 3.7e-182 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PPHMHJPN_00698 9.8e-36 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PPHMHJPN_00699 9.6e-194 oppD P Belongs to the ABC transporter superfamily
PPHMHJPN_00700 1.9e-170 oppF P Belongs to the ABC transporter superfamily
PPHMHJPN_00701 5.7e-172 oppB P ABC transporter permease
PPHMHJPN_00702 1.7e-128 oppC P Binding-protein-dependent transport system inner membrane component
PPHMHJPN_00703 7.4e-120 oppA E ABC transporter substrate-binding protein
PPHMHJPN_00704 1.8e-116 oppA E ABC transporter substrate-binding protein
PPHMHJPN_00705 2.4e-15 oppA E ABC transporter substrate-binding protein
PPHMHJPN_00706 3e-307 oppA E ABC transporter substrate-binding protein
PPHMHJPN_00707 5.5e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PPHMHJPN_00708 0.0 smc D Required for chromosome condensation and partitioning
PPHMHJPN_00709 7e-162 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PPHMHJPN_00710 2.5e-288 pipD E Dipeptidase
PPHMHJPN_00712 3.4e-23
PPHMHJPN_00713 4.1e-133 cysA V ABC transporter, ATP-binding protein
PPHMHJPN_00714 0.0 V FtsX-like permease family
PPHMHJPN_00715 1e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PPHMHJPN_00716 1.6e-161 htrA 3.4.21.107 O serine protease
PPHMHJPN_00717 4.1e-147 vicX 3.1.26.11 S domain protein
PPHMHJPN_00718 3.4e-149 yycI S YycH protein
PPHMHJPN_00719 2.1e-257 yycH S YycH protein
PPHMHJPN_00720 2.2e-305 vicK 2.7.13.3 T Histidine kinase
PPHMHJPN_00721 4.8e-131 K response regulator
PPHMHJPN_00723 4.9e-34
PPHMHJPN_00725 1.6e-148 arbV 2.3.1.51 I Acyl-transferase
PPHMHJPN_00726 1.5e-155 arbx M Glycosyl transferase family 8
PPHMHJPN_00727 1.3e-36
PPHMHJPN_00728 9.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PPHMHJPN_00729 1.3e-146 ykuT M mechanosensitive ion channel
PPHMHJPN_00730 3.1e-100 V ATPases associated with a variety of cellular activities
PPHMHJPN_00731 1.4e-133
PPHMHJPN_00732 3.4e-99
PPHMHJPN_00733 6.7e-19 spaC2 V Lanthionine synthetase C-like protein
PPHMHJPN_00735 8.3e-210 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PPHMHJPN_00736 1.1e-146 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PPHMHJPN_00737 8.9e-187 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PPHMHJPN_00738 2.3e-198 oppD P Belongs to the ABC transporter superfamily
PPHMHJPN_00739 1.9e-175 oppF P Belongs to the ABC transporter superfamily
PPHMHJPN_00740 5.2e-256 pepC 3.4.22.40 E aminopeptidase
PPHMHJPN_00741 2.9e-67 hsp O Belongs to the small heat shock protein (HSP20) family
PPHMHJPN_00742 7.5e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PPHMHJPN_00743 7.9e-112
PPHMHJPN_00745 1.2e-111 E Belongs to the SOS response-associated peptidase family
PPHMHJPN_00746 3.7e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PPHMHJPN_00747 1.8e-89 comEB 3.5.4.12 F MafB19-like deaminase
PPHMHJPN_00748 2e-103 S TPM domain
PPHMHJPN_00749 1.5e-132 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PPHMHJPN_00750 1e-307 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PPHMHJPN_00751 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PPHMHJPN_00752 1e-147 tatD L hydrolase, TatD family
PPHMHJPN_00753 1e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PPHMHJPN_00754 3e-151 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PPHMHJPN_00755 4.5e-39 veg S Biofilm formation stimulator VEG
PPHMHJPN_00756 1.1e-147 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
PPHMHJPN_00757 1.3e-172 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PPHMHJPN_00758 1.2e-49 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PPHMHJPN_00759 7e-135 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PPHMHJPN_00760 1.3e-68 GM NAD(P)H-binding
PPHMHJPN_00761 8.9e-34 S Domain of unknown function (DUF4440)
PPHMHJPN_00762 6.6e-90 K LysR substrate binding domain
PPHMHJPN_00764 3.3e-45 K Tetracycline repressor, C-terminal all-alpha domain
PPHMHJPN_00765 3.2e-79 S X-Pro dipeptidyl-peptidase (S15 family)
PPHMHJPN_00766 7.7e-10 C Flavodoxin
PPHMHJPN_00770 2.2e-129 blpT
PPHMHJPN_00771 1.4e-107 M Transport protein ComB
PPHMHJPN_00772 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PPHMHJPN_00773 1.2e-127 K LytTr DNA-binding domain
PPHMHJPN_00774 4.4e-138 2.7.13.3 T GHKL domain
PPHMHJPN_00775 1.2e-16
PPHMHJPN_00776 2.1e-255 S Archaea bacterial proteins of unknown function
PPHMHJPN_00777 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PPHMHJPN_00778 3e-270 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
PPHMHJPN_00779 1e-24
PPHMHJPN_00780 9.5e-26
PPHMHJPN_00781 2.5e-33
PPHMHJPN_00782 1.4e-53 S Enterocin A Immunity
PPHMHJPN_00783 8e-145 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PPHMHJPN_00784 5.5e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PPHMHJPN_00785 6.6e-207 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
PPHMHJPN_00786 9.6e-121 K response regulator
PPHMHJPN_00787 0.0 V ABC transporter
PPHMHJPN_00788 4.2e-144 V ABC transporter, ATP-binding protein
PPHMHJPN_00789 1.2e-145 V ABC transporter, ATP-binding protein
PPHMHJPN_00790 3.8e-137 XK27_01040 S Protein of unknown function (DUF1129)
PPHMHJPN_00791 3.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PPHMHJPN_00792 2.8e-44 yyzM S Bacterial protein of unknown function (DUF951)
PPHMHJPN_00793 1.5e-153 spo0J K Belongs to the ParB family
PPHMHJPN_00794 3.4e-138 soj D Sporulation initiation inhibitor
PPHMHJPN_00795 5e-148 noc K Belongs to the ParB family
PPHMHJPN_00796 1.2e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PPHMHJPN_00797 3e-53 cvpA S Colicin V production protein
PPHMHJPN_00799 2.5e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PPHMHJPN_00800 6e-151 3.1.3.48 T Tyrosine phosphatase family
PPHMHJPN_00801 2e-97 azr 1.5.1.36 S NADPH-dependent FMN reductase
PPHMHJPN_00802 6.4e-96 nqr 1.5.1.36 S NADPH-dependent FMN reductase
PPHMHJPN_00803 3.7e-111 K WHG domain
PPHMHJPN_00804 8e-38
PPHMHJPN_00805 4.2e-92 S SNARE associated Golgi protein
PPHMHJPN_00806 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
PPHMHJPN_00807 6.4e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PPHMHJPN_00808 3.8e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PPHMHJPN_00809 1.2e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
PPHMHJPN_00810 5.2e-110 yjbK S CYTH
PPHMHJPN_00811 4.6e-114 yjbH Q Thioredoxin
PPHMHJPN_00812 4e-13 coiA 3.6.4.12 S Competence protein
PPHMHJPN_00813 3.3e-122 coiA 3.6.4.12 S Competence protein
PPHMHJPN_00814 8.5e-139 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PPHMHJPN_00815 3.9e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PPHMHJPN_00816 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PPHMHJPN_00817 8.5e-41 ptsH G phosphocarrier protein HPR
PPHMHJPN_00818 0.0 clpE O Belongs to the ClpA ClpB family
PPHMHJPN_00819 8.7e-44 XK27_09445 S Domain of unknown function (DUF1827)
PPHMHJPN_00820 2.1e-304 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PPHMHJPN_00821 1.2e-141 hlyX S Transporter associated domain
PPHMHJPN_00822 1.6e-74
PPHMHJPN_00823 7.8e-85
PPHMHJPN_00824 3e-145 recX 2.4.1.337 GT4 S Regulatory protein RecX
PPHMHJPN_00825 1.2e-263 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PPHMHJPN_00826 2.2e-119 D Alpha beta
PPHMHJPN_00827 2.9e-27 D Alpha beta
PPHMHJPN_00828 1e-44
PPHMHJPN_00829 1.2e-216 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PPHMHJPN_00830 5.9e-214 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PPHMHJPN_00831 5.6e-214 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
PPHMHJPN_00832 7.3e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PPHMHJPN_00833 8e-163 yihY S Belongs to the UPF0761 family
PPHMHJPN_00834 6.5e-164 map 3.4.11.18 E Methionine Aminopeptidase
PPHMHJPN_00835 4.1e-80 fld C Flavodoxin
PPHMHJPN_00836 3.1e-87 gtcA S Teichoic acid glycosylation protein
PPHMHJPN_00838 1.7e-28 mloB K Putative ATP-dependent DNA helicase recG C-terminal
PPHMHJPN_00839 3.5e-248 lctP C L-lactate permease
PPHMHJPN_00840 5.7e-18
PPHMHJPN_00841 1.5e-239 G Bacterial extracellular solute-binding protein
PPHMHJPN_00842 1e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
PPHMHJPN_00843 1.1e-236 XK27_01810 S Calcineurin-like phosphoesterase
PPHMHJPN_00845 0.0 S SLAP domain
PPHMHJPN_00846 0.0 hsdR 3.1.21.3 L DEAD/DEAH box helicase
PPHMHJPN_00847 1.2e-164 S AAA domain, putative AbiEii toxin, Type IV TA system
PPHMHJPN_00848 3.4e-42 S RloB-like protein
PPHMHJPN_00849 1.9e-259 hsdM 2.1.1.72 V type I restriction-modification system
PPHMHJPN_00850 1.7e-98 3.1.21.3 V Type I restriction modification DNA specificity domain
PPHMHJPN_00851 1.2e-63 S SIR2-like domain
PPHMHJPN_00852 3.2e-10 S Domain of unknown function DUF87
PPHMHJPN_00853 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PPHMHJPN_00854 3.5e-32 ykzG S Belongs to the UPF0356 family
PPHMHJPN_00855 8.9e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PPHMHJPN_00856 0.0 typA T GTP-binding protein TypA
PPHMHJPN_00857 5.9e-211 ftsW D Belongs to the SEDS family
PPHMHJPN_00858 5.1e-54 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
PPHMHJPN_00859 4.5e-97 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PPHMHJPN_00860 1.1e-81 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PPHMHJPN_00861 6.9e-187 ylbL T Belongs to the peptidase S16 family
PPHMHJPN_00862 3.1e-79 comEA L Competence protein ComEA
PPHMHJPN_00863 0.0 comEC S Competence protein ComEC
PPHMHJPN_00864 2.6e-175 holA 2.7.7.7 L DNA polymerase III delta subunit
PPHMHJPN_00865 6.7e-35 rpsT J Binds directly to 16S ribosomal RNA
PPHMHJPN_00866 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PPHMHJPN_00867 3e-310 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PPHMHJPN_00868 1.3e-148
PPHMHJPN_00869 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PPHMHJPN_00870 4e-216 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PPHMHJPN_00871 2e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PPHMHJPN_00872 1.4e-104 engB D Necessary for normal cell division and for the maintenance of normal septation
PPHMHJPN_00873 7.8e-39 yjeM E Amino Acid
PPHMHJPN_00874 3.4e-175 yjeM E Amino Acid
PPHMHJPN_00875 2.3e-192 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PPHMHJPN_00876 1.3e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
PPHMHJPN_00877 1.3e-246 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PPHMHJPN_00878 2.8e-75 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PPHMHJPN_00879 5.2e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PPHMHJPN_00880 9.8e-177 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PPHMHJPN_00881 7e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PPHMHJPN_00882 2.3e-215 aspC 2.6.1.1 E Aminotransferase
PPHMHJPN_00883 2.3e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PPHMHJPN_00884 4.7e-194 pbpX1 V Beta-lactamase
PPHMHJPN_00885 4.6e-299 I Protein of unknown function (DUF2974)
PPHMHJPN_00886 1.8e-38 C FMN_bind
PPHMHJPN_00887 3.9e-82
PPHMHJPN_00888 1.8e-175 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
PPHMHJPN_00889 6.4e-90 alkD L DNA alkylation repair enzyme
PPHMHJPN_00890 6.8e-294 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PPHMHJPN_00891 1.1e-127 K UTRA domain
PPHMHJPN_00892 1.6e-55 celA1 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PPHMHJPN_00893 4.3e-59 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
PPHMHJPN_00894 3.2e-11
PPHMHJPN_00895 1.7e-298 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PPHMHJPN_00896 2e-194 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PPHMHJPN_00897 9.7e-166 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PPHMHJPN_00898 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PPHMHJPN_00899 1.5e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PPHMHJPN_00900 1.8e-62 yabR J S1 RNA binding domain
PPHMHJPN_00901 6.8e-60 divIC D Septum formation initiator
PPHMHJPN_00902 1.6e-33 yabO J S4 domain protein
PPHMHJPN_00903 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PPHMHJPN_00904 5.1e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PPHMHJPN_00905 1.5e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PPHMHJPN_00906 3.4e-129 S (CBS) domain
PPHMHJPN_00907 1e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PPHMHJPN_00908 1.7e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PPHMHJPN_00909 4.8e-250 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PPHMHJPN_00910 1.3e-262 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PPHMHJPN_00911 2.5e-39 rpmE2 J Ribosomal protein L31
PPHMHJPN_00912 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
PPHMHJPN_00913 2.6e-157 S Sucrose-6F-phosphate phosphohydrolase
PPHMHJPN_00914 9.5e-297 ybeC E amino acid
PPHMHJPN_00915 6.4e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PPHMHJPN_00916 2.1e-42
PPHMHJPN_00917 1.4e-51
PPHMHJPN_00918 1.4e-184 5.3.3.2 C FMN-dependent dehydrogenase
PPHMHJPN_00919 1.3e-141 yfeO P Voltage gated chloride channel
PPHMHJPN_00920 7.8e-202 XK27_00915 C Luciferase-like monooxygenase
PPHMHJPN_00921 6.5e-87 K GNAT family
PPHMHJPN_00922 1.4e-124 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
PPHMHJPN_00924 1.5e-36
PPHMHJPN_00925 2.6e-286 P ABC transporter
PPHMHJPN_00926 7.6e-242 V ABC-type multidrug transport system, ATPase and permease components
PPHMHJPN_00927 2.4e-251 yifK E Amino acid permease
PPHMHJPN_00928 3.1e-178 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PPHMHJPN_00929 1.2e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PPHMHJPN_00930 0.0 aha1 P E1-E2 ATPase
PPHMHJPN_00931 5.8e-177 F DNA/RNA non-specific endonuclease
PPHMHJPN_00932 1e-159 metQ2 P Belongs to the nlpA lipoprotein family
PPHMHJPN_00933 1e-190 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PPHMHJPN_00934 2e-73 metI P ABC transporter permease
PPHMHJPN_00935 9e-267 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PPHMHJPN_00936 1.9e-261 frdC 1.3.5.4 C FAD binding domain
PPHMHJPN_00937 3.1e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PPHMHJPN_00938 4.1e-253 pepC 3.4.22.40 E Peptidase C1-like family
PPHMHJPN_00939 1.3e-133 hxlA 6.2.1.3 H Aldolase/RraA
PPHMHJPN_00940 4.7e-274 P Sodium:sulfate symporter transmembrane region
PPHMHJPN_00941 1.1e-152 ydjP I Alpha/beta hydrolase family
PPHMHJPN_00942 6.9e-195 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PPHMHJPN_00943 1.2e-43 citD C Covalent carrier of the coenzyme of citrate lyase
PPHMHJPN_00944 3.8e-165 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
PPHMHJPN_00945 9.2e-289 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
PPHMHJPN_00946 7.9e-71 yeaL S Protein of unknown function (DUF441)
PPHMHJPN_00947 1.8e-22
PPHMHJPN_00948 1.2e-144 cbiQ P cobalt transport
PPHMHJPN_00949 0.0 ykoD P ABC transporter, ATP-binding protein
PPHMHJPN_00950 1.5e-95 S UPF0397 protein
PPHMHJPN_00951 1.1e-84 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PPHMHJPN_00952 2.5e-175 prmA J Ribosomal protein L11 methyltransferase
PPHMHJPN_00953 4.2e-36
PPHMHJPN_00954 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PPHMHJPN_00955 6e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PPHMHJPN_00956 9.8e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
PPHMHJPN_00957 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PPHMHJPN_00958 9.8e-222 patA 2.6.1.1 E Aminotransferase
PPHMHJPN_00960 1e-215 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PPHMHJPN_00961 4.8e-34 S reductase
PPHMHJPN_00962 4.4e-39 S reductase
PPHMHJPN_00963 2.7e-32 S reductase
PPHMHJPN_00964 8.4e-148 yxeH S hydrolase
PPHMHJPN_00965 6.8e-181 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PPHMHJPN_00966 1.1e-243 yfnA E Amino Acid
PPHMHJPN_00967 6.8e-110 dedA 3.1.3.1 S SNARE associated Golgi protein
PPHMHJPN_00968 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PPHMHJPN_00969 1.7e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PPHMHJPN_00970 7.7e-293 I Acyltransferase
PPHMHJPN_00971 5.4e-175 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PPHMHJPN_00972 1.9e-141 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PPHMHJPN_00973 1.5e-34 yrvD S Lipopolysaccharide assembly protein A domain
PPHMHJPN_00974 1.3e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PPHMHJPN_00975 1.8e-130 sip L Belongs to the 'phage' integrase family
PPHMHJPN_00978 8.5e-24 S Hypothetical protein (DUF2513)
PPHMHJPN_00979 7.4e-20 S Pfam:Peptidase_M78
PPHMHJPN_00980 7.1e-19 ps115 K sequence-specific DNA binding
PPHMHJPN_00983 1.4e-16
PPHMHJPN_00984 3.6e-73 ps308 K AntA/AntB antirepressor
PPHMHJPN_00985 9.5e-14
PPHMHJPN_00991 5e-30 S HNH endonuclease
PPHMHJPN_00992 6.1e-70 S AAA domain
PPHMHJPN_00994 2.6e-154 res L Helicase C-terminal domain protein
PPHMHJPN_00996 7.9e-41 S Protein of unknown function (DUF669)
PPHMHJPN_00997 6.9e-272 S Phage plasmid primase, P4
PPHMHJPN_01009 3.3e-37 S VRR_NUC
PPHMHJPN_01011 7.7e-18
PPHMHJPN_01012 2.5e-48 S HNH endonuclease
PPHMHJPN_01013 4.2e-56 S Phage terminase, small subunit
PPHMHJPN_01015 1.7e-212 S Phage Terminase
PPHMHJPN_01017 2.2e-133 S Phage portal protein
PPHMHJPN_01018 1.9e-87 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
PPHMHJPN_01019 1.6e-52 S peptidase activity
PPHMHJPN_01020 5.5e-19 S Phage gp6-like head-tail connector protein
PPHMHJPN_01022 2.8e-12 S Bacteriophage HK97-gp10, putative tail-component
PPHMHJPN_01024 1.2e-12 S Pfam:Phage_TTP_1
PPHMHJPN_01027 8.2e-129 M Phage tail tape measure protein TP901
PPHMHJPN_01028 1.7e-33 S phage tail
PPHMHJPN_01029 6e-136 S Phage minor structural protein
PPHMHJPN_01030 9e-161 V ABC transporter transmembrane region
PPHMHJPN_01031 7e-68 V ABC transporter transmembrane region
PPHMHJPN_01032 3.8e-65 yybA 2.3.1.57 K Transcriptional regulator
PPHMHJPN_01033 4.7e-83 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
PPHMHJPN_01034 2.5e-72 S Peptidase propeptide and YPEB domain
PPHMHJPN_01035 5.8e-76 S Peptidase propeptide and YPEB domain
PPHMHJPN_01036 5.2e-187 T GHKL domain
PPHMHJPN_01037 3.1e-130 T Transcriptional regulatory protein, C terminal
PPHMHJPN_01038 3.6e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
PPHMHJPN_01039 2.9e-277 V ABC transporter transmembrane region
PPHMHJPN_01040 1.7e-30
PPHMHJPN_01041 3e-21
PPHMHJPN_01042 3.7e-83
PPHMHJPN_01043 8.2e-31 yozG K Transcriptional regulator
PPHMHJPN_01044 2e-23
PPHMHJPN_01045 1.7e-67
PPHMHJPN_01046 1.1e-164 natA S ABC transporter, ATP-binding protein
PPHMHJPN_01047 1.8e-218 natB CP ABC-2 family transporter protein
PPHMHJPN_01048 1.8e-136 fruR K DeoR C terminal sensor domain
PPHMHJPN_01049 2.2e-168 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PPHMHJPN_01050 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
PPHMHJPN_01051 5.4e-41 K helix_turn_helix, Arsenical Resistance Operon Repressor
PPHMHJPN_01052 1.4e-148 psaA P Belongs to the bacterial solute-binding protein 9 family
PPHMHJPN_01053 1.6e-117 fhuC P ABC transporter
PPHMHJPN_01054 5e-129 znuB U ABC 3 transport family
PPHMHJPN_01055 6.2e-36 licR 2.7.1.200, 2.7.1.202 G Mga helix-turn-helix domain
PPHMHJPN_01056 0.0 mngB 3.2.1.170, 3.2.1.24 GH38 G Glycosyl hydrolases family 38 N-terminal domain
PPHMHJPN_01057 2.6e-35 yaaA S S4 domain protein YaaA
PPHMHJPN_01058 1.1e-209 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PPHMHJPN_01059 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PPHMHJPN_01060 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PPHMHJPN_01061 1.6e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
PPHMHJPN_01062 2.7e-75 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PPHMHJPN_01063 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PPHMHJPN_01064 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PPHMHJPN_01065 5.7e-69 rplI J Binds to the 23S rRNA
PPHMHJPN_01066 6.7e-254 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PPHMHJPN_01067 2.3e-165 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
PPHMHJPN_01068 5.2e-170 degV S DegV family
PPHMHJPN_01069 2.5e-135 V ABC transporter transmembrane region
PPHMHJPN_01070 6.7e-167 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PPHMHJPN_01072 1.4e-16
PPHMHJPN_01073 1.6e-227 I Protein of unknown function (DUF2974)
PPHMHJPN_01074 9.2e-119 yhiD S MgtC family
PPHMHJPN_01076 3.9e-131 K Helix-turn-helix XRE-family like proteins
PPHMHJPN_01077 7.4e-74
PPHMHJPN_01078 3.3e-87
PPHMHJPN_01079 3.3e-141 D Ftsk spoiiie family protein
PPHMHJPN_01080 5.1e-145 S Replication initiation factor
PPHMHJPN_01081 3.9e-55
PPHMHJPN_01082 2.3e-26
PPHMHJPN_01083 9.5e-220 L Belongs to the 'phage' integrase family
PPHMHJPN_01085 2.5e-62 yfiL V ABC transporter
PPHMHJPN_01086 2.9e-46 V Transport permease protein
PPHMHJPN_01088 1.2e-210 S Bacterial protein of unknown function (DUF871)
PPHMHJPN_01090 2.3e-43 ybhL S Belongs to the BI1 family
PPHMHJPN_01091 1.9e-237 brnQ U Component of the transport system for branched-chain amino acids
PPHMHJPN_01092 2.8e-24 S Alpha beta hydrolase
PPHMHJPN_01093 2.4e-273 lsa S ABC transporter
PPHMHJPN_01094 3.5e-107 S Protein of unknown function (DUF1211)
PPHMHJPN_01095 1.6e-310 oppA E ABC transporter, substratebinding protein
PPHMHJPN_01096 5e-301 oppA E ABC transporter, substratebinding protein
PPHMHJPN_01097 1.3e-122 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PPHMHJPN_01098 4.6e-257 pepC 3.4.22.40 E aminopeptidase
PPHMHJPN_01100 4.5e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PPHMHJPN_01101 8.4e-265 S Fibronectin type III domain
PPHMHJPN_01102 5.9e-13 K Acetyltransferase (GNAT) domain
PPHMHJPN_01103 1.9e-12 L Transposase
PPHMHJPN_01104 1.4e-16 L Transposase
PPHMHJPN_01105 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PPHMHJPN_01106 5.2e-68 L haloacid dehalogenase-like hydrolase
PPHMHJPN_01107 4.9e-123 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
PPHMHJPN_01108 7.2e-129 ulaE 5.1.3.22 G Xylose isomerase-like TIM barrel
PPHMHJPN_01109 2.8e-90 ulaD 4.1.1.85, 4.1.2.43 G Orotidine 5'-phosphate decarboxylase / HUMPS family
PPHMHJPN_01110 1.8e-31 sgaB 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
PPHMHJPN_01111 1.3e-231 ulaA S PTS system sugar-specific permease component
PPHMHJPN_01112 1.5e-61 cmtB 2.7.1.194, 2.7.1.197, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PPHMHJPN_01113 8.1e-175 ulaG S Beta-lactamase superfamily domain
PPHMHJPN_01114 2.9e-66 S Domain of unknown function DUF1828
PPHMHJPN_01115 5.5e-09
PPHMHJPN_01116 3.8e-51
PPHMHJPN_01117 2.6e-177 citR K Putative sugar-binding domain
PPHMHJPN_01118 1.9e-250 yjjP S Putative threonine/serine exporter
PPHMHJPN_01120 1.4e-39
PPHMHJPN_01121 2.3e-25 M domain protein
PPHMHJPN_01122 1.8e-200 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PPHMHJPN_01123 2.2e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PPHMHJPN_01124 2.6e-214 yubA S AI-2E family transporter
PPHMHJPN_01125 4.2e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PPHMHJPN_01126 1.7e-69 WQ51_03320 S Protein of unknown function (DUF1149)
PPHMHJPN_01127 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PPHMHJPN_01128 9e-223 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
PPHMHJPN_01129 1.9e-236 S Peptidase M16
PPHMHJPN_01130 2.3e-133 IQ Enoyl-(Acyl carrier protein) reductase
PPHMHJPN_01131 2.1e-95 ymfM S Helix-turn-helix domain
PPHMHJPN_01132 1.1e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PPHMHJPN_01133 4.2e-195 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PPHMHJPN_01134 7.4e-220 rny S Endoribonuclease that initiates mRNA decay
PPHMHJPN_01135 1.3e-210 tagO 2.7.8.33, 2.7.8.35 M transferase
PPHMHJPN_01136 5.1e-119 yvyE 3.4.13.9 S YigZ family
PPHMHJPN_01137 4.7e-246 comFA L Helicase C-terminal domain protein
PPHMHJPN_01138 9.4e-132 comFC S Competence protein
PPHMHJPN_01139 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PPHMHJPN_01140 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PPHMHJPN_01141 4.6e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PPHMHJPN_01142 5.1e-17
PPHMHJPN_01143 5.8e-180 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PPHMHJPN_01144 9.2e-158 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PPHMHJPN_01145 1.1e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PPHMHJPN_01146 3.9e-181 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PPHMHJPN_01147 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PPHMHJPN_01148 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PPHMHJPN_01149 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PPHMHJPN_01150 4.1e-90 S Short repeat of unknown function (DUF308)
PPHMHJPN_01151 6.2e-165 rapZ S Displays ATPase and GTPase activities
PPHMHJPN_01152 4e-195 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PPHMHJPN_01153 2.1e-171 whiA K May be required for sporulation
PPHMHJPN_01154 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PPHMHJPN_01155 0.0 S SH3-like domain
PPHMHJPN_01156 4.9e-111 ybbL S ABC transporter, ATP-binding protein
PPHMHJPN_01157 2.5e-130 ybbM S Uncharacterised protein family (UPF0014)
PPHMHJPN_01158 3.8e-30
PPHMHJPN_01159 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PPHMHJPN_01160 9.4e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PPHMHJPN_01161 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PPHMHJPN_01162 3.9e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PPHMHJPN_01163 8.6e-251 dnaB L Replication initiation and membrane attachment
PPHMHJPN_01164 1.3e-168 dnaI L Primosomal protein DnaI
PPHMHJPN_01165 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PPHMHJPN_01166 4.3e-75
PPHMHJPN_01167 7.8e-52 V ABC-type multidrug transport system, ATPase and permease components
PPHMHJPN_01168 8.9e-276 V ABC-type multidrug transport system, ATPase and permease components
PPHMHJPN_01169 1.2e-10
PPHMHJPN_01170 2.8e-65 K LytTr DNA-binding domain
PPHMHJPN_01171 1.2e-49 S Protein of unknown function (DUF3021)
PPHMHJPN_01172 6.3e-105 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
PPHMHJPN_01173 1.9e-118 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PPHMHJPN_01174 6e-132 S membrane transporter protein
PPHMHJPN_01175 3.7e-125 gpmB G Belongs to the phosphoglycerate mutase family
PPHMHJPN_01176 7.3e-161 czcD P cation diffusion facilitator family transporter
PPHMHJPN_01177 1.4e-23
PPHMHJPN_01178 2.6e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PPHMHJPN_01179 5.4e-183 S AAA domain
PPHMHJPN_01180 3.3e-44
PPHMHJPN_01181 4.3e-266 pepC 3.4.22.40 E Peptidase C1-like family
PPHMHJPN_01182 2.7e-51
PPHMHJPN_01183 1e-288 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
PPHMHJPN_01184 8.9e-101 treR K UTRA
PPHMHJPN_01185 6.1e-282 treB G phosphotransferase system
PPHMHJPN_01186 5.7e-65 spxA_2 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PPHMHJPN_01187 1.2e-190 yrvN L AAA C-terminal domain
PPHMHJPN_01188 2.2e-251 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PPHMHJPN_01189 9e-83 K Acetyltransferase (GNAT) domain
PPHMHJPN_01190 1.3e-229 S Putative peptidoglycan binding domain
PPHMHJPN_01191 7.5e-95 S ECF-type riboflavin transporter, S component
PPHMHJPN_01192 2.8e-98 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PPHMHJPN_01193 9.3e-204 pbpX1 V Beta-lactamase
PPHMHJPN_01194 1.4e-115 lacA 2.3.1.79 S Transferase hexapeptide repeat
PPHMHJPN_01195 1.9e-80 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PPHMHJPN_01196 3.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PPHMHJPN_01197 4.1e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PPHMHJPN_01198 7.6e-132 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PPHMHJPN_01199 2.6e-61 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PPHMHJPN_01200 2.9e-165 xerD D recombinase XerD
PPHMHJPN_01201 1e-167 cvfB S S1 domain
PPHMHJPN_01202 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PPHMHJPN_01203 3.3e-183 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PPHMHJPN_01204 0.0 dnaE 2.7.7.7 L DNA polymerase
PPHMHJPN_01205 1.5e-22 S Protein of unknown function (DUF2929)
PPHMHJPN_01206 1.8e-308 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PPHMHJPN_01207 1.8e-10
PPHMHJPN_01209 2.1e-85 S N-acetylmuramoyl-L-alanine amidase activity
PPHMHJPN_01210 4.5e-30 S Bacteriophage holin of superfamily 6 (Holin_LLH)
PPHMHJPN_01219 4e-36 S Cytochrome B5
PPHMHJPN_01220 1.7e-167 arbZ I Phosphate acyltransferases
PPHMHJPN_01221 8.7e-181 arbY M Glycosyl transferase family 8
PPHMHJPN_01222 1.5e-143 arbY M Glycosyl transferase family 8
PPHMHJPN_01223 3.1e-48 S Domain of unknown function (DUF4811)
PPHMHJPN_01224 1.4e-262 lmrB EGP Major facilitator Superfamily
PPHMHJPN_01225 4.2e-77 K MerR HTH family regulatory protein
PPHMHJPN_01226 3.1e-139 S Cysteine-rich secretory protein family
PPHMHJPN_01227 1e-273 ycaM E amino acid
PPHMHJPN_01228 2.8e-290
PPHMHJPN_01230 2.6e-189 cggR K Putative sugar-binding domain
PPHMHJPN_01231 6.5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PPHMHJPN_01232 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PPHMHJPN_01233 1.7e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PPHMHJPN_01234 2.3e-198 L COG2826 Transposase and inactivated derivatives, IS30 family
PPHMHJPN_01235 1.2e-94
PPHMHJPN_01236 3.4e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
PPHMHJPN_01237 9.7e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PPHMHJPN_01238 4.1e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PPHMHJPN_01239 7e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PPHMHJPN_01240 4e-98 dnaQ 2.7.7.7 L DNA polymerase III
PPHMHJPN_01241 2e-163 murB 1.3.1.98 M Cell wall formation
PPHMHJPN_01242 1.8e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PPHMHJPN_01243 1.3e-129 potB P ABC transporter permease
PPHMHJPN_01244 4.8e-127 potC P ABC transporter permease
PPHMHJPN_01245 7.3e-208 potD P ABC transporter
PPHMHJPN_01246 6.4e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PPHMHJPN_01247 2e-172 ybbR S YbbR-like protein
PPHMHJPN_01248 3.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PPHMHJPN_01249 1.4e-147 S hydrolase
PPHMHJPN_01250 1.8e-75 K Penicillinase repressor
PPHMHJPN_01251 1.4e-117
PPHMHJPN_01252 7.4e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PPHMHJPN_01253 3.8e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PPHMHJPN_01254 8.3e-143 licT K CAT RNA binding domain
PPHMHJPN_01255 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
PPHMHJPN_01256 9.1e-302 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PPHMHJPN_01257 6.9e-178 D Alpha beta
PPHMHJPN_01258 2.8e-304 E Amino acid permease
PPHMHJPN_01260 9.8e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PPHMHJPN_01261 5.1e-108 ylbE GM NAD(P)H-binding
PPHMHJPN_01262 2.9e-93 S VanZ like family
PPHMHJPN_01263 8.9e-133 yebC K Transcriptional regulatory protein
PPHMHJPN_01264 1.7e-179 comGA NU Type II IV secretion system protein
PPHMHJPN_01265 1.7e-171 comGB NU type II secretion system
PPHMHJPN_01266 3.1e-43 comGC U competence protein ComGC
PPHMHJPN_01267 7.4e-71
PPHMHJPN_01268 8.6e-41
PPHMHJPN_01269 9.4e-76 comGF U Putative Competence protein ComGF
PPHMHJPN_01270 1.6e-21
PPHMHJPN_01271 3.5e-188 ytxK 2.1.1.72 L N-6 DNA Methylase
PPHMHJPN_01272 6.3e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PPHMHJPN_01274 1.8e-153 L Belongs to the 'phage' integrase family
PPHMHJPN_01275 5e-08 S Pfam:DUF955
PPHMHJPN_01276 1.2e-23 K Helix-turn-helix domain
PPHMHJPN_01277 9e-22 XK27_07105 K Helix-turn-helix XRE-family like proteins
PPHMHJPN_01278 2.6e-31 K Helix-turn-helix domain
PPHMHJPN_01280 4.1e-09 S Arc-like DNA binding domain
PPHMHJPN_01282 9e-21 K Conserved phage C-terminus (Phg_2220_C)
PPHMHJPN_01283 1e-25 S Domain of unknown function (DUF771)
PPHMHJPN_01290 2.6e-11 ssb L Single-strand binding protein family
PPHMHJPN_01296 9.2e-24 srtA 3.4.22.70 M sortase family
PPHMHJPN_01298 1.3e-39 M domain protein
PPHMHJPN_01299 6.8e-15 S SLAP domain
PPHMHJPN_01300 1.3e-30 M domain protein
PPHMHJPN_01304 2.4e-141 U TraM recognition site of TraD and TraG
PPHMHJPN_01305 3.9e-32 I mechanosensitive ion channel activity
PPHMHJPN_01307 2.2e-15
PPHMHJPN_01308 8.1e-160 trsE S COG0433 Predicted ATPase
PPHMHJPN_01309 1.2e-32 M Peptidase family M23
PPHMHJPN_01312 2.4e-18 CO COG0526, thiol-disulfide isomerase and thioredoxins
PPHMHJPN_01318 3.4e-52 S COG0790 FOG TPR repeat, SEL1 subfamily
PPHMHJPN_01319 1.7e-39 L Protein of unknown function (DUF3991)
PPHMHJPN_01320 2.1e-111 S Fic/DOC family
PPHMHJPN_01321 1.4e-78 2.7.13.3 T GHKL domain
PPHMHJPN_01322 4.9e-79 K LytTr DNA-binding domain
PPHMHJPN_01323 1.2e-304 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PPHMHJPN_01324 1.2e-190 S Putative peptidoglycan binding domain
PPHMHJPN_01325 4e-16
PPHMHJPN_01326 7.9e-92 liaI S membrane
PPHMHJPN_01327 1.7e-70 XK27_02470 K LytTr DNA-binding domain
PPHMHJPN_01329 8e-185 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
PPHMHJPN_01330 2.6e-115 dedA S SNARE-like domain protein
PPHMHJPN_01331 3.7e-100 S Protein of unknown function (DUF1461)
PPHMHJPN_01332 6.9e-144 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PPHMHJPN_01333 1.7e-105 yutD S Protein of unknown function (DUF1027)
PPHMHJPN_01334 9.8e-274 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PPHMHJPN_01335 4.3e-55
PPHMHJPN_01336 2.3e-267 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PPHMHJPN_01337 3.2e-181 ccpA K catabolite control protein A
PPHMHJPN_01338 7e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PPHMHJPN_01339 4.1e-259 yfnA E amino acid
PPHMHJPN_01340 6e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PPHMHJPN_01341 1.7e-228 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PPHMHJPN_01342 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PPHMHJPN_01343 1.7e-93 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PPHMHJPN_01344 1.4e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PPHMHJPN_01345 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PPHMHJPN_01346 6.7e-212 S SLAP domain
PPHMHJPN_01347 2.1e-120 ung2 3.2.2.27 L Uracil-DNA glycosylase
PPHMHJPN_01348 1.3e-114 E GDSL-like Lipase/Acylhydrolase family
PPHMHJPN_01349 9.5e-112 L Resolvase, N-terminal
PPHMHJPN_01350 7.7e-204 L Putative transposase DNA-binding domain
PPHMHJPN_01351 1.4e-20 E GDSL-like Lipase/Acylhydrolase family
PPHMHJPN_01352 2e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PPHMHJPN_01353 3e-38 ynzC S UPF0291 protein
PPHMHJPN_01354 5.5e-30 yneF S Uncharacterised protein family (UPF0154)
PPHMHJPN_01355 0.0 mdlA V ABC transporter
PPHMHJPN_01356 0.0 mdlB V ABC transporter
PPHMHJPN_01357 0.0 pepO 3.4.24.71 O Peptidase family M13
PPHMHJPN_01358 4e-220 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PPHMHJPN_01359 2.9e-116 plsC 2.3.1.51 I Acyltransferase
PPHMHJPN_01360 3e-195 yabB 2.1.1.223 L Methyltransferase small domain
PPHMHJPN_01361 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
PPHMHJPN_01362 3.1e-184 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PPHMHJPN_01363 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PPHMHJPN_01364 5.3e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PPHMHJPN_01365 5.4e-138 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PPHMHJPN_01366 8.4e-140 cdsA 2.7.7.41 I Belongs to the CDS family
PPHMHJPN_01367 5.7e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PPHMHJPN_01368 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PPHMHJPN_01369 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PPHMHJPN_01370 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
PPHMHJPN_01371 1.4e-196 nusA K Participates in both transcription termination and antitermination
PPHMHJPN_01372 8.8e-47 ylxR K Protein of unknown function (DUF448)
PPHMHJPN_01373 3.2e-47 rplGA J ribosomal protein
PPHMHJPN_01374 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PPHMHJPN_01375 1.1e-59 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PPHMHJPN_01376 1.6e-155 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PPHMHJPN_01377 3.2e-175 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PPHMHJPN_01378 6.5e-193 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PPHMHJPN_01379 8e-68 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PPHMHJPN_01380 0.0 dnaK O Heat shock 70 kDa protein
PPHMHJPN_01381 5.8e-203 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PPHMHJPN_01382 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PPHMHJPN_01383 4.2e-180 sip L Belongs to the 'phage' integrase family
PPHMHJPN_01384 1.6e-20 S YjcQ protein
PPHMHJPN_01388 6e-14
PPHMHJPN_01389 1.2e-10 E Zn peptidase
PPHMHJPN_01390 3.5e-15 ansR 3.4.21.88 K Cro/C1-type HTH DNA-binding domain
PPHMHJPN_01391 1.1e-12
PPHMHJPN_01392 1.8e-10
PPHMHJPN_01393 2.1e-76 S Phage antirepressor protein KilAC domain
PPHMHJPN_01398 2.9e-12
PPHMHJPN_01399 8e-97 S AntA/AntB antirepressor
PPHMHJPN_01404 3.6e-09
PPHMHJPN_01409 1.2e-58 S Protein of unknown function (DUF1071)
PPHMHJPN_01410 6.8e-33 S Conserved phage C-terminus (Phg_2220_C)
PPHMHJPN_01411 1.4e-51 dnaC L IstB-like ATP binding protein
PPHMHJPN_01417 1.2e-40 rusA 3.1.22.4 L Endodeoxyribonuclease RusA
PPHMHJPN_01418 2.1e-14
PPHMHJPN_01425 2.7e-35 S HicB_like antitoxin of bacterial toxin-antitoxin system
PPHMHJPN_01426 5.2e-10 hicA N HicA toxin of bacterial toxin-antitoxin,
PPHMHJPN_01427 2.7e-25 L Terminase small subunit
PPHMHJPN_01428 9.8e-232 S Terminase-like family
PPHMHJPN_01429 6.3e-143 S Protein of unknown function (DUF1073)
PPHMHJPN_01430 2e-98 S Phage Mu protein F like protein
PPHMHJPN_01431 1.1e-07 S Lysin motif
PPHMHJPN_01432 3.9e-87 S Uncharacterized protein conserved in bacteria (DUF2213)
PPHMHJPN_01433 8.2e-60
PPHMHJPN_01434 7.1e-143 Z012_11565 S Uncharacterized protein conserved in bacteria (DUF2184)
PPHMHJPN_01435 3.2e-31 S Protein of unknown function (DUF4054)
PPHMHJPN_01436 6.8e-76
PPHMHJPN_01437 1.5e-44
PPHMHJPN_01438 1.2e-55
PPHMHJPN_01439 5.7e-153 Z012_02110 S Protein of unknown function (DUF3383)
PPHMHJPN_01440 4e-56
PPHMHJPN_01441 6.9e-27
PPHMHJPN_01443 0.0 3.4.14.13 M Phage tail tape measure protein TP901
PPHMHJPN_01444 6.7e-54 M LysM domain
PPHMHJPN_01445 2.1e-46
PPHMHJPN_01446 1.1e-104
PPHMHJPN_01447 1.2e-48
PPHMHJPN_01448 4.3e-33
PPHMHJPN_01449 8.5e-125 Z012_12235 S Baseplate J-like protein
PPHMHJPN_01450 2.9e-09
PPHMHJPN_01451 1.9e-36
PPHMHJPN_01455 4.2e-38
PPHMHJPN_01456 2.2e-19 S Phage uncharacterised protein (Phage_XkdX)
PPHMHJPN_01457 1.1e-07
PPHMHJPN_01459 7.9e-19
PPHMHJPN_01460 5e-29
PPHMHJPN_01461 6.7e-172 M Glycosyl hydrolases family 25
PPHMHJPN_01462 5.9e-24
PPHMHJPN_01463 2.5e-35 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PPHMHJPN_01464 1.5e-102 srtA 3.4.22.70 M sortase family
PPHMHJPN_01465 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PPHMHJPN_01466 1.2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PPHMHJPN_01467 2.2e-89
PPHMHJPN_01468 1.1e-08 isdH M Iron Transport-associated domain
PPHMHJPN_01469 6.3e-123 M Iron Transport-associated domain
PPHMHJPN_01470 8.7e-159 isdE P Periplasmic binding protein
PPHMHJPN_01471 9.5e-148 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PPHMHJPN_01472 6.7e-139 fhuC 3.6.3.34 HP abc transporter atp-binding protein
PPHMHJPN_01473 6.7e-44 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PPHMHJPN_01474 3.4e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
PPHMHJPN_01475 1.3e-38 S RelB antitoxin
PPHMHJPN_01476 5.2e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
PPHMHJPN_01477 0.0 S membrane
PPHMHJPN_01478 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
PPHMHJPN_01479 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PPHMHJPN_01480 2.7e-97 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PPHMHJPN_01481 4e-119 gluP 3.4.21.105 S Rhomboid family
PPHMHJPN_01482 9.7e-36 yqgQ S Bacterial protein of unknown function (DUF910)
PPHMHJPN_01483 1.5e-65 yqhL P Rhodanese-like protein
PPHMHJPN_01484 1.5e-167 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PPHMHJPN_01485 7.6e-225 ynbB 4.4.1.1 P aluminum resistance
PPHMHJPN_01486 2e-263 glnA 6.3.1.2 E glutamine synthetase
PPHMHJPN_01487 6.7e-170
PPHMHJPN_01488 6e-148
PPHMHJPN_01489 1.9e-21
PPHMHJPN_01492 2.7e-34
PPHMHJPN_01493 4.5e-131 S interspecies interaction between organisms
PPHMHJPN_01495 9.1e-10 K peptidyl-tyrosine sulfation
PPHMHJPN_01496 7.1e-263 E ABC transporter, substratebinding protein
PPHMHJPN_01497 3.7e-66 K Helix-turn-helix domain, rpiR family
PPHMHJPN_01498 2.9e-122 nanA 4.1.3.3, 4.3.3.7 EM Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
PPHMHJPN_01499 8.4e-90 nanK GK ROK family
PPHMHJPN_01500 3.1e-56 G Xylose isomerase domain protein TIM barrel
PPHMHJPN_01501 2.1e-120 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PPHMHJPN_01502 1e-220 nanT E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PPHMHJPN_01503 1.3e-67 axe1 3.1.1.41 Q Acetyl xylan esterase (AXE1)
PPHMHJPN_01504 5.7e-24 axe1 3.1.1.41 Q Acetyl xylan esterase (AXE1)
PPHMHJPN_01505 7.7e-110 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PPHMHJPN_01506 2.8e-125 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PPHMHJPN_01507 1.4e-107 yisY 1.11.1.10 S Alpha/beta hydrolase family
PPHMHJPN_01508 3.5e-108 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PPHMHJPN_01509 6.1e-111 crt 4.2.1.17 I Enoyl-CoA hydratase/isomerase
PPHMHJPN_01510 9.3e-151 fabK 1.3.1.9 S Nitronate monooxygenase
PPHMHJPN_01511 1.6e-82 2.8.3.1 I Coenzyme A transferase
PPHMHJPN_01512 1.1e-149 2.8.3.1 I Coenzyme A transferase
PPHMHJPN_01513 3.7e-144 gltC_1 3.1.3.48 K LysR substrate binding domain
PPHMHJPN_01514 1.5e-54 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PPHMHJPN_01515 3.2e-75 S ECF transporter, substrate-specific component
PPHMHJPN_01517 9.3e-74 coaA 2.7.1.33 F Pantothenic acid kinase
PPHMHJPN_01518 1.4e-31 O OsmC-like protein
PPHMHJPN_01520 1.5e-36 oppA E ABC transporter substrate-binding protein
PPHMHJPN_01521 2.9e-12
PPHMHJPN_01522 2e-18 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PPHMHJPN_01523 2.5e-89 M Protein of unknown function (DUF3737)
PPHMHJPN_01524 9.9e-227 patB 4.4.1.8 E Aminotransferase, class I
PPHMHJPN_01525 6.1e-190 manA 5.3.1.8 G mannose-6-phosphate isomerase
PPHMHJPN_01526 7.7e-67 S SdpI/YhfL protein family
PPHMHJPN_01527 4.4e-129 K Transcriptional regulatory protein, C terminal
PPHMHJPN_01528 7.2e-267 yclK 2.7.13.3, 4.6.1.1 T Histidine kinase
PPHMHJPN_01529 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PPHMHJPN_01530 3.8e-105 vanZ V VanZ like family
PPHMHJPN_01531 3.2e-253 pgi 5.3.1.9 G Belongs to the GPI family
PPHMHJPN_01532 3.8e-217 EGP Major facilitator Superfamily
PPHMHJPN_01533 3.9e-195 ampC V Beta-lactamase
PPHMHJPN_01536 1.7e-262 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
PPHMHJPN_01537 1.3e-113 tdk 2.7.1.21 F thymidine kinase
PPHMHJPN_01538 3.1e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PPHMHJPN_01539 7.3e-155 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PPHMHJPN_01540 3.7e-190 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PPHMHJPN_01541 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PPHMHJPN_01542 3.8e-128 atpB C it plays a direct role in the translocation of protons across the membrane
PPHMHJPN_01543 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PPHMHJPN_01544 3.4e-46 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PPHMHJPN_01545 2.8e-91 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PPHMHJPN_01546 2.8e-282 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PPHMHJPN_01547 2e-172 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PPHMHJPN_01548 3.3e-240 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PPHMHJPN_01549 9e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PPHMHJPN_01550 2e-30 ywzB S Protein of unknown function (DUF1146)
PPHMHJPN_01551 1.2e-177 mbl D Cell shape determining protein MreB Mrl
PPHMHJPN_01552 1e-50 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PPHMHJPN_01553 3.3e-33 S Protein of unknown function (DUF2969)
PPHMHJPN_01554 4.7e-216 rodA D Belongs to the SEDS family
PPHMHJPN_01555 1.8e-78 usp6 T universal stress protein
PPHMHJPN_01556 8.4e-39
PPHMHJPN_01557 2.2e-238 rarA L recombination factor protein RarA
PPHMHJPN_01558 1.3e-84 yueI S Protein of unknown function (DUF1694)
PPHMHJPN_01559 1.4e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PPHMHJPN_01560 6.2e-294 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PPHMHJPN_01561 7.3e-214 iscS2 2.8.1.7 E Aminotransferase class V
PPHMHJPN_01562 2e-225 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PPHMHJPN_01563 1.7e-184 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PPHMHJPN_01564 3.2e-119 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PPHMHJPN_01565 5.5e-44 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PPHMHJPN_01566 2.1e-65 2.4.1.83 GT2 S GtrA-like protein
PPHMHJPN_01567 5.2e-170 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
PPHMHJPN_01568 1.5e-94 S Protein of unknown function (DUF3990)
PPHMHJPN_01569 6.5e-44
PPHMHJPN_01571 0.0 3.6.3.8 P P-type ATPase
PPHMHJPN_01572 1.1e-132 S AAA domain, putative AbiEii toxin, Type IV TA system
PPHMHJPN_01573 2.5e-52
PPHMHJPN_01574 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PPHMHJPN_01575 1.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PPHMHJPN_01576 5.7e-126 S Haloacid dehalogenase-like hydrolase
PPHMHJPN_01577 2.3e-108 radC L DNA repair protein
PPHMHJPN_01578 2.4e-176 mreB D cell shape determining protein MreB
PPHMHJPN_01579 2e-147 mreC M Involved in formation and maintenance of cell shape
PPHMHJPN_01580 2.7e-94 mreD
PPHMHJPN_01582 6.4e-54 S Protein of unknown function (DUF3397)
PPHMHJPN_01583 6.3e-78 mraZ K Belongs to the MraZ family
PPHMHJPN_01584 7.2e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PPHMHJPN_01585 1.8e-54 ftsL D Cell division protein FtsL
PPHMHJPN_01586 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PPHMHJPN_01587 1.5e-175 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PPHMHJPN_01588 5e-262 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PPHMHJPN_01589 3.7e-207 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PPHMHJPN_01590 4.5e-152 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PPHMHJPN_01591 6.7e-243 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PPHMHJPN_01592 1.7e-206 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PPHMHJPN_01593 7.3e-74 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PPHMHJPN_01594 1.7e-45 yggT S YGGT family
PPHMHJPN_01595 5.7e-149 ylmH S S4 domain protein
PPHMHJPN_01596 2.8e-74 gpsB D DivIVA domain protein
PPHMHJPN_01597 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PPHMHJPN_01598 3.6e-31 cspA K 'Cold-shock' DNA-binding domain
PPHMHJPN_01599 2.8e-102 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PPHMHJPN_01600 6.7e-37
PPHMHJPN_01601 1.2e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PPHMHJPN_01602 3.5e-216 iscS 2.8.1.7 E Aminotransferase class V
PPHMHJPN_01603 5.4e-56 XK27_04120 S Putative amino acid metabolism
PPHMHJPN_01604 5.1e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PPHMHJPN_01605 3.9e-127 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PPHMHJPN_01606 8.3e-106 S Repeat protein
PPHMHJPN_01607 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PPHMHJPN_01608 1.6e-294 L Nuclease-related domain
PPHMHJPN_01609 2.3e-164 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PPHMHJPN_01610 1.7e-177 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PPHMHJPN_01611 3.6e-144 epsB M biosynthesis protein
PPHMHJPN_01612 5.8e-122 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PPHMHJPN_01613 3.7e-145 ywqE 3.1.3.48 GM PHP domain protein
PPHMHJPN_01614 9.1e-121 rfbP M Bacterial sugar transferase
PPHMHJPN_01615 9.4e-158 M Glycosyltransferase
PPHMHJPN_01616 5e-49 cpsF M Oligosaccharide biosynthesis protein Alg14 like
PPHMHJPN_01617 1.3e-74 pssE S Glycosyltransferase family 28 C-terminal domain
PPHMHJPN_01618 2e-104 GT4 M Glycosyl transferases group 1
PPHMHJPN_01619 2.4e-52 Z012_10770 M Domain of unknown function (DUF1919)
PPHMHJPN_01620 2.5e-72 fcbD 2.7.8.12 GT2 M Glycosyltransferase like family 2
PPHMHJPN_01621 2.3e-121 V Abi-like protein
PPHMHJPN_01623 4e-137 K Helix-turn-helix XRE-family like proteins
PPHMHJPN_01624 2.3e-18
PPHMHJPN_01625 9.6e-152 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PPHMHJPN_01626 3.9e-292 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PPHMHJPN_01627 7e-144 ptp2 3.1.3.48 T Tyrosine phosphatase family
PPHMHJPN_01628 3.1e-178 yvdE K helix_turn _helix lactose operon repressor
PPHMHJPN_01629 9.1e-204 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PPHMHJPN_01630 4.2e-56 S PAS domain
PPHMHJPN_01631 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
PPHMHJPN_01632 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PPHMHJPN_01633 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PPHMHJPN_01634 1.4e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PPHMHJPN_01635 3e-209 msmX P Belongs to the ABC transporter superfamily
PPHMHJPN_01636 2.3e-213 malE G Bacterial extracellular solute-binding protein
PPHMHJPN_01637 1.1e-250 malF P Binding-protein-dependent transport system inner membrane component
PPHMHJPN_01638 3.3e-147 malG P ABC transporter permease
PPHMHJPN_01639 1.5e-59 K Helix-turn-helix XRE-family like proteins
PPHMHJPN_01642 1.6e-28
PPHMHJPN_01643 6.7e-09
PPHMHJPN_01645 6.7e-88 ymdB S Macro domain protein
PPHMHJPN_01646 4.3e-212 mdtG EGP Major facilitator Superfamily
PPHMHJPN_01647 7.4e-175
PPHMHJPN_01648 2.8e-47 lysM M LysM domain
PPHMHJPN_01649 0.0 pepN 3.4.11.2 E aminopeptidase
PPHMHJPN_01650 2.3e-82 yveB 2.7.4.29 I PAP2 superfamily
PPHMHJPN_01651 3.2e-26 xerC L Phage integrase, N-terminal SAM-like domain
PPHMHJPN_01652 3.2e-145 pstS P Phosphate
PPHMHJPN_01653 1.3e-154 pstC P probably responsible for the translocation of the substrate across the membrane
PPHMHJPN_01654 4.6e-152 pstA P Phosphate transport system permease protein PstA
PPHMHJPN_01655 1.5e-138 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PPHMHJPN_01656 1.2e-104 phoU P Plays a role in the regulation of phosphate uptake
PPHMHJPN_01657 8.9e-119 T Transcriptional regulatory protein, C terminal
PPHMHJPN_01658 2.5e-276 phoR 2.7.13.3 T Histidine kinase
PPHMHJPN_01659 1.4e-192 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PPHMHJPN_01660 7.9e-73 nrdI F NrdI Flavodoxin like
PPHMHJPN_01661 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PPHMHJPN_01662 3.7e-260 L Transposase
PPHMHJPN_01663 9.2e-35 L Transposase DDE domain
PPHMHJPN_01664 5.3e-249 dtpT U amino acid peptide transporter
PPHMHJPN_01665 1.1e-56 S Protein of unknown function (DUF3290)
PPHMHJPN_01666 3e-116 yviA S Protein of unknown function (DUF421)
PPHMHJPN_01667 5.8e-157 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PPHMHJPN_01668 1e-181 dnaQ 2.7.7.7 L EXOIII
PPHMHJPN_01669 1.9e-158 endA F DNA RNA non-specific endonuclease
PPHMHJPN_01670 1.6e-282 pipD E Dipeptidase
PPHMHJPN_01671 9.3e-203 malK P ATPases associated with a variety of cellular activities
PPHMHJPN_01672 1.6e-157 gtsB P ABC-type sugar transport systems, permease components
PPHMHJPN_01673 6.1e-146 gtsC P Binding-protein-dependent transport system inner membrane component
PPHMHJPN_01674 2.4e-258 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
PPHMHJPN_01675 5.1e-240 G Bacterial extracellular solute-binding protein
PPHMHJPN_01676 1.8e-154 corA P CorA-like Mg2+ transporter protein
PPHMHJPN_01677 3.3e-148 3.5.2.6 V Beta-lactamase enzyme family
PPHMHJPN_01678 1.5e-98 yobS K Bacterial regulatory proteins, tetR family
PPHMHJPN_01679 0.0 ydgH S MMPL family
PPHMHJPN_01680 3.4e-107
PPHMHJPN_01681 1.6e-35 S Bacterial toxin of type II toxin-antitoxin system, YafQ
PPHMHJPN_01682 5e-39 relB L RelB antitoxin
PPHMHJPN_01684 2.9e-97 D VirC1 protein
PPHMHJPN_01685 3.8e-15 S Domain of Unknown Function with PDB structure (DUF3850)
PPHMHJPN_01687 2.2e-101 K Helix-turn-helix domain, rpiR family
PPHMHJPN_01688 4.9e-82 rarA L MgsA AAA+ ATPase C terminal
PPHMHJPN_01689 1.2e-225 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PPHMHJPN_01691 1.8e-104 3.2.2.20 K acetyltransferase
PPHMHJPN_01692 2.3e-93 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PPHMHJPN_01693 3e-24
PPHMHJPN_01694 1e-223 L Transposase
PPHMHJPN_01695 1.5e-180 S Domain of unknown function (DUF389)
PPHMHJPN_01696 5.1e-181 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PPHMHJPN_01697 3e-130 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PPHMHJPN_01698 8.3e-40 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PPHMHJPN_01699 4e-40 S CRISPR-associated protein (Cas_Csn2)
PPHMHJPN_01700 9.4e-269 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
PPHMHJPN_01701 2.5e-43
PPHMHJPN_01702 1.6e-171 2.7.1.2 GK ROK family
PPHMHJPN_01703 4.8e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PPHMHJPN_01704 2e-295 S SLAP domain
PPHMHJPN_01705 5.3e-80
PPHMHJPN_01706 5.9e-45
PPHMHJPN_01707 3.7e-58 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PPHMHJPN_01709 2.1e-45 S PFAM Archaeal ATPase
PPHMHJPN_01710 7.3e-74
PPHMHJPN_01711 0.0 kup P Transport of potassium into the cell
PPHMHJPN_01712 0.0 pepO 3.4.24.71 O Peptidase family M13
PPHMHJPN_01713 2.3e-210 yttB EGP Major facilitator Superfamily
PPHMHJPN_01714 1.5e-230 XK27_04775 S PAS domain
PPHMHJPN_01715 2.1e-103 S Iron-sulfur cluster assembly protein
PPHMHJPN_01716 8.7e-141 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PPHMHJPN_01717 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PPHMHJPN_01718 5.6e-255 yxbA 6.3.1.12 S ATP-grasp enzyme
PPHMHJPN_01719 0.0 asnB 6.3.5.4 E Asparagine synthase
PPHMHJPN_01720 1.6e-271 S Calcineurin-like phosphoesterase
PPHMHJPN_01721 3.9e-84
PPHMHJPN_01722 1.6e-105 tag 3.2.2.20 L glycosylase
PPHMHJPN_01723 1.5e-18 S CRISPR-associated protein (Cas_Csn2)
PPHMHJPN_01724 1.2e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PPHMHJPN_01725 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PPHMHJPN_01726 3.5e-71 yqeY S YqeY-like protein
PPHMHJPN_01727 2.5e-175 phoH T phosphate starvation-inducible protein PhoH
PPHMHJPN_01728 2.2e-93 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PPHMHJPN_01729 2.1e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PPHMHJPN_01730 4.4e-135 recO L Involved in DNA repair and RecF pathway recombination
PPHMHJPN_01731 4.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PPHMHJPN_01732 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PPHMHJPN_01733 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PPHMHJPN_01734 9.9e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PPHMHJPN_01735 2.2e-22
PPHMHJPN_01736 3.3e-140 repB EP Plasmid replication protein
PPHMHJPN_01737 2e-79 S helix_turn_helix, Deoxyribose operon repressor
PPHMHJPN_01738 1.7e-93 V ABC transporter, ATP-binding protein
PPHMHJPN_01739 4.7e-60 S ABC-2 family transporter protein
PPHMHJPN_01740 2.1e-76 S ABC-2 family transporter protein
PPHMHJPN_01741 2.2e-230 pbuG S permease
PPHMHJPN_01742 7e-139 cof S haloacid dehalogenase-like hydrolase
PPHMHJPN_01743 2.7e-71
PPHMHJPN_01744 9.3e-124 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PPHMHJPN_01745 8.5e-119 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PPHMHJPN_01746 2.1e-134 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PPHMHJPN_01747 1.8e-77 yeaE S Aldo/keto reductase family
PPHMHJPN_01748 1.1e-68 yeaE S Aldo/keto reductase family
PPHMHJPN_01749 4.4e-172 yufQ S Belongs to the binding-protein-dependent transport system permease family
PPHMHJPN_01750 1.9e-198 yufP S Belongs to the binding-protein-dependent transport system permease family
PPHMHJPN_01751 1.5e-283 xylG 3.6.3.17 S ABC transporter
PPHMHJPN_01752 6.9e-181 tcsA S ABC transporter substrate-binding protein PnrA-like
PPHMHJPN_01753 2.3e-201 tcsA S ABC transporter substrate-binding protein PnrA-like
PPHMHJPN_01754 2.8e-100 S ECF transporter, substrate-specific component
PPHMHJPN_01755 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PPHMHJPN_01756 0.0 macB_3 V ABC transporter, ATP-binding protein
PPHMHJPN_01757 3.7e-191 S DUF218 domain
PPHMHJPN_01758 9.1e-121 S CAAX protease self-immunity
PPHMHJPN_01759 1.6e-109 ropB K Transcriptional regulator
PPHMHJPN_01760 4.2e-154 EGP Major facilitator Superfamily
PPHMHJPN_01761 5.4e-51
PPHMHJPN_01762 2.6e-155 mutR K Helix-turn-helix XRE-family like proteins
PPHMHJPN_01763 4.1e-276 V ABC transporter transmembrane region
PPHMHJPN_01764 2.3e-41 S YoeB-like toxin of bacterial type II toxin-antitoxin system
PPHMHJPN_01765 1.9e-47 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PPHMHJPN_01766 2.8e-205 napA P Sodium/hydrogen exchanger family
PPHMHJPN_01767 0.0 cadA P P-type ATPase
PPHMHJPN_01768 1.5e-80 ykuL S (CBS) domain
PPHMHJPN_01769 1e-207 ywhK S Membrane
PPHMHJPN_01770 4.1e-44
PPHMHJPN_01771 1.2e-18 S D-Ala-teichoic acid biosynthesis protein
PPHMHJPN_01772 2.1e-285 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PPHMHJPN_01773 1.9e-236 dltB M MBOAT, membrane-bound O-acyltransferase family
PPHMHJPN_01774 1.7e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PPHMHJPN_01775 1.5e-247 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PPHMHJPN_01776 2.9e-176 pbpX2 V Beta-lactamase
PPHMHJPN_01777 2.3e-133 S Protein of unknown function (DUF975)
PPHMHJPN_01778 2.7e-137 lysA2 M Glycosyl hydrolases family 25
PPHMHJPN_01779 7.9e-291 ytgP S Polysaccharide biosynthesis protein
PPHMHJPN_01780 1.9e-36
PPHMHJPN_01781 0.0 XK27_06780 V ABC transporter permease
PPHMHJPN_01782 5.1e-125 XK27_06785 V ABC transporter, ATP-binding protein
PPHMHJPN_01783 2.2e-238 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PPHMHJPN_01784 2.2e-165 S Alpha/beta hydrolase of unknown function (DUF915)
PPHMHJPN_01785 0.0 clpE O AAA domain (Cdc48 subfamily)
PPHMHJPN_01786 4.3e-115 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PPHMHJPN_01787 9.7e-234 cycA E Amino acid permease
PPHMHJPN_01788 9.2e-248 yifK E Amino acid permease
PPHMHJPN_01789 6.4e-135 S PFAM Archaeal ATPase
PPHMHJPN_01790 2.4e-172 V HNH endonuclease
PPHMHJPN_01792 2.2e-139 puuD S peptidase C26
PPHMHJPN_01793 1.8e-230 steT_1 E amino acid
PPHMHJPN_01794 3.2e-189 asnA 6.3.1.1 F aspartate--ammonia ligase
PPHMHJPN_01795 3.9e-206 4.2.1.126 S Bacterial protein of unknown function (DUF871)
PPHMHJPN_01798 7.7e-188 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PPHMHJPN_01799 6.4e-251 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PPHMHJPN_01800 2.8e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PPHMHJPN_01801 7.3e-21 hicA S HicA toxin of bacterial toxin-antitoxin,
PPHMHJPN_01803 5.5e-30
PPHMHJPN_01804 4.3e-40 S Protein of unknown function (DUF2922)
PPHMHJPN_01805 3.6e-132 S SLAP domain
PPHMHJPN_01807 5.3e-41
PPHMHJPN_01808 1.2e-77 K DNA-templated transcription, initiation
PPHMHJPN_01809 1.1e-25
PPHMHJPN_01810 4.3e-145 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PPHMHJPN_01811 6.7e-19 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PPHMHJPN_01812 6.5e-105 S SLAP domain
PPHMHJPN_01814 5.4e-215 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PPHMHJPN_01815 2.5e-179 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
PPHMHJPN_01816 8.8e-177 yjbQ P TrkA C-terminal domain protein
PPHMHJPN_01817 1.9e-113 yjbQ P TrkA C-terminal domain protein
PPHMHJPN_01818 1.7e-106 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PPHMHJPN_01819 1.7e-160 S Oxidoreductase family, NAD-binding Rossmann fold
PPHMHJPN_01820 2.1e-130
PPHMHJPN_01821 2.1e-116
PPHMHJPN_01822 5e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PPHMHJPN_01823 1.4e-98 G Aldose 1-epimerase
PPHMHJPN_01824 5.2e-201 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PPHMHJPN_01825 1.6e-111 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PPHMHJPN_01826 0.0 XK27_08315 M Sulfatase
PPHMHJPN_01827 3.5e-205 G Glycosyl hydrolases family 8
PPHMHJPN_01828 1.3e-246 ydaM M Glycosyl transferase
PPHMHJPN_01830 1.7e-151
PPHMHJPN_01831 3.8e-273 pipD E Dipeptidase
PPHMHJPN_01832 1.5e-102 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PPHMHJPN_01833 9.5e-176 hrtB V ABC transporter permease
PPHMHJPN_01834 1.4e-90 ygfC K Bacterial regulatory proteins, tetR family
PPHMHJPN_01835 3.5e-111 G phosphoglycerate mutase
PPHMHJPN_01836 5e-164 4.2.1.53 S Myosin-crossreactive antigen
PPHMHJPN_01837 1.2e-177 4.2.1.53 S Myosin-crossreactive antigen
PPHMHJPN_01838 2.3e-90 yxdD K Bacterial regulatory proteins, tetR family
PPHMHJPN_01839 9.5e-259 emrY EGP Major facilitator Superfamily
PPHMHJPN_01844 1.1e-94 MA20_25245 K Acetyltransferase (GNAT) domain
PPHMHJPN_01845 5.8e-255 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PPHMHJPN_01846 1.6e-199 pbpX V Beta-lactamase
PPHMHJPN_01847 1.3e-230 nhaC C Na H antiporter NhaC
PPHMHJPN_01848 4.5e-50
PPHMHJPN_01849 1.2e-105 ybhL S Belongs to the BI1 family
PPHMHJPN_01850 1.5e-65 K transcriptional regulator
PPHMHJPN_01851 6e-18
PPHMHJPN_01852 2.7e-171 yegS 2.7.1.107 G Lipid kinase
PPHMHJPN_01853 4.1e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PPHMHJPN_01854 1.5e-269 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PPHMHJPN_01855 1.5e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PPHMHJPN_01856 5.8e-203 camS S sex pheromone
PPHMHJPN_01857 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PPHMHJPN_01858 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PPHMHJPN_01859 2.5e-86 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
PPHMHJPN_01861 4.8e-84 ydcK S Belongs to the SprT family
PPHMHJPN_01862 7.7e-134 M Glycosyltransferase sugar-binding region containing DXD motif
PPHMHJPN_01863 3e-257 epsU S Polysaccharide biosynthesis protein
PPHMHJPN_01864 7e-225 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PPHMHJPN_01865 0.0 pacL 3.6.3.8 P P-type ATPase
PPHMHJPN_01866 1.3e-202 tnpB L Putative transposase DNA-binding domain
PPHMHJPN_01867 1.2e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PPHMHJPN_01868 2.4e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PPHMHJPN_01869 2.9e-204 csaB M Glycosyl transferases group 1
PPHMHJPN_01870 1.2e-134 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PPHMHJPN_01871 1.5e-152
PPHMHJPN_01872 2.7e-268 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
PPHMHJPN_01873 2.7e-135 glvR K Helix-turn-helix domain, rpiR family
PPHMHJPN_01874 1.5e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
PPHMHJPN_01875 6.4e-243 cydA 1.10.3.14 C ubiquinol oxidase
PPHMHJPN_01876 2.5e-173 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
PPHMHJPN_01877 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PPHMHJPN_01878 4.1e-269 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PPHMHJPN_01879 2.2e-128 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PPHMHJPN_01880 6.1e-177 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PPHMHJPN_01881 3.6e-160 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PPHMHJPN_01882 1.2e-230 ndh 1.6.99.3 C NADH dehydrogenase
PPHMHJPN_01883 1.6e-43 1.3.5.4 C FAD binding domain
PPHMHJPN_01884 1.6e-85 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PPHMHJPN_01885 2.6e-169 K LysR substrate binding domain
PPHMHJPN_01886 6.4e-122 3.6.1.27 I Acid phosphatase homologues
PPHMHJPN_01887 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PPHMHJPN_01888 6.8e-298 ytgP S Polysaccharide biosynthesis protein
PPHMHJPN_01889 4.3e-47 pspC KT PspC domain
PPHMHJPN_01891 1.6e-233 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PPHMHJPN_01892 6.9e-153 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PPHMHJPN_01893 7.9e-99 M ErfK YbiS YcfS YnhG
PPHMHJPN_01894 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PPHMHJPN_01895 6e-171 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PPHMHJPN_01896 1.8e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
PPHMHJPN_01897 2.7e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PPHMHJPN_01898 1.9e-291 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PPHMHJPN_01899 2.9e-276 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PPHMHJPN_01900 6.7e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PPHMHJPN_01901 6.6e-139 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PPHMHJPN_01902 4.2e-95 sigH K Belongs to the sigma-70 factor family
PPHMHJPN_01903 1.7e-34
PPHMHJPN_01904 1.9e-286 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
PPHMHJPN_01905 2.1e-70 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PPHMHJPN_01906 1.6e-246 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PPHMHJPN_01907 3.6e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PPHMHJPN_01908 3.1e-101 nusG K Participates in transcription elongation, termination and antitermination
PPHMHJPN_01909 1.2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PPHMHJPN_01910 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PPHMHJPN_01911 2.8e-157 pstS P Phosphate
PPHMHJPN_01912 4.3e-162 pstC P probably responsible for the translocation of the substrate across the membrane
PPHMHJPN_01913 1e-154 pstA P Phosphate transport system permease protein PstA
PPHMHJPN_01914 5e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PPHMHJPN_01915 3.9e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PPHMHJPN_01916 2.2e-117 phoU P Plays a role in the regulation of phosphate uptake
PPHMHJPN_01917 1.2e-88 L An automated process has identified a potential problem with this gene model
PPHMHJPN_01918 3.3e-11 GT2,GT4 M family 8
PPHMHJPN_01919 7e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PPHMHJPN_01920 1.8e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PPHMHJPN_01921 1.5e-139 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
PPHMHJPN_01922 1.3e-116 rsmC 2.1.1.172 J Methyltransferase
PPHMHJPN_01923 9e-26
PPHMHJPN_01924 7e-23 cydA 1.10.3.14 C ubiquinol oxidase
PPHMHJPN_01925 4.5e-144 ybbH_2 K rpiR family
PPHMHJPN_01926 3.1e-187 S Bacterial protein of unknown function (DUF871)
PPHMHJPN_01927 1.4e-183 yfeW 3.4.16.4 V Beta-lactamase
PPHMHJPN_01928 3.1e-151 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PPHMHJPN_01929 0.0 sacX 2.7.1.208, 2.7.1.211 G phosphotransferase system
PPHMHJPN_01930 2.4e-246 qacA EGP Major facilitator Superfamily
PPHMHJPN_01931 8.7e-218 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PPHMHJPN_01934 5.7e-166 psaA P Belongs to the bacterial solute-binding protein 9 family
PPHMHJPN_01936 3.3e-86 bcgIB 2.1.1.72, 3.1.21.3 V Type I restriction modification DNA specificity domain
PPHMHJPN_01937 3.3e-241 V N-6 DNA Methylase
PPHMHJPN_01938 2.4e-99 L An automated process has identified a potential problem with this gene model
PPHMHJPN_01939 8.3e-123 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
PPHMHJPN_01940 3.5e-57 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PPHMHJPN_01941 6.5e-18 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
PPHMHJPN_01942 9.7e-205 gatC G PTS system sugar-specific permease component
PPHMHJPN_01943 1.2e-24 2.7.1.200, 2.7.1.202 G phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2
PPHMHJPN_01945 7.9e-16 L An automated process has identified a potential problem with this gene model
PPHMHJPN_01946 9.4e-51 L An automated process has identified a potential problem with this gene model
PPHMHJPN_01948 1e-66 doc S Fic/DOC family
PPHMHJPN_01949 4.1e-34
PPHMHJPN_01951 1.1e-23 S CAAX protease self-immunity
PPHMHJPN_01953 9.8e-134 topA2 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PPHMHJPN_01955 9.6e-18 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
PPHMHJPN_01956 1.7e-23 relB L Addiction module antitoxin, RelB DinJ family
PPHMHJPN_01957 6.1e-48 E Pfam:DUF955
PPHMHJPN_01959 4.7e-97 yceD S Uncharacterized ACR, COG1399
PPHMHJPN_01960 4.6e-216 ylbM S Belongs to the UPF0348 family
PPHMHJPN_01961 5.3e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PPHMHJPN_01962 4.3e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PPHMHJPN_01963 4.4e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PPHMHJPN_01964 4.4e-200 yqeH S Ribosome biogenesis GTPase YqeH
PPHMHJPN_01965 4.2e-84 yqeG S HAD phosphatase, family IIIA
PPHMHJPN_01966 8.6e-199 tnpB L Putative transposase DNA-binding domain
PPHMHJPN_01967 1.1e-152 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PPHMHJPN_01968 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PPHMHJPN_01969 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PPHMHJPN_01970 3.2e-72 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PPHMHJPN_01971 4e-98 rihB 3.2.2.1 F Nucleoside
PPHMHJPN_01972 1.8e-79 potB E Binding-protein-dependent transport system inner membrane component
PPHMHJPN_01973 1.3e-149 oppA E ABC transporter substrate-binding protein
PPHMHJPN_01974 2.2e-54 oppA E ABC transporter substrate-binding protein
PPHMHJPN_01975 1.1e-75 V ABC transporter transmembrane region
PPHMHJPN_01976 6.5e-64 L RelB antitoxin
PPHMHJPN_01977 2.1e-131 cobQ S glutamine amidotransferase
PPHMHJPN_01978 1.8e-81 M NlpC/P60 family
PPHMHJPN_01981 2.6e-155
PPHMHJPN_01982 7.8e-38
PPHMHJPN_01983 2e-32
PPHMHJPN_01984 6.2e-163 EG EamA-like transporter family
PPHMHJPN_01985 5e-165 EG EamA-like transporter family
PPHMHJPN_01986 1.2e-139 yicL EG EamA-like transporter family
PPHMHJPN_01987 4.3e-107
PPHMHJPN_01988 1.1e-110
PPHMHJPN_01989 5.8e-186 XK27_05540 S DUF218 domain
PPHMHJPN_01990 9.3e-264 yheS_2 S ATPases associated with a variety of cellular activities
PPHMHJPN_01991 7.2e-86
PPHMHJPN_01992 3.9e-57
PPHMHJPN_01993 4.7e-25 S Protein conserved in bacteria
PPHMHJPN_01994 1.3e-54 S protein encoded in hypervariable junctions of pilus gene clusters
PPHMHJPN_01995 1.5e-124 S PAS domain
PPHMHJPN_01996 1.6e-11
PPHMHJPN_01997 2.7e-57
PPHMHJPN_01998 6.6e-56
PPHMHJPN_01999 4e-08
PPHMHJPN_02000 3.8e-93 licR 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT domain protein
PPHMHJPN_02001 1.2e-280 ybgG 3.2.1.170 GH38 G Glycosyl hydrolases family 38 N-terminal domain
PPHMHJPN_02002 1.4e-150 mngA 2.7.1.195, 2.7.1.202 U system, fructose-specific IIC component
PPHMHJPN_02003 5.3e-37 mngA 2.7.1.195, 2.7.1.202 G Psort location Cytoplasmic, score 9.98
PPHMHJPN_02004 2e-42 fryA 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PPHMHJPN_02005 2e-35
PPHMHJPN_02007 3.8e-104 pncA Q Isochorismatase family
PPHMHJPN_02008 4.9e-118
PPHMHJPN_02011 3.6e-63
PPHMHJPN_02012 1.4e-34
PPHMHJPN_02013 5.9e-216 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PPHMHJPN_02015 1.8e-248 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PPHMHJPN_02016 2.8e-211 yfmL 3.6.4.13 L DEAD DEAH box helicase
PPHMHJPN_02017 1.1e-130 M Glycosyl hydrolases family 25
PPHMHJPN_02018 8.6e-82 yxaM EGP Major facilitator Superfamily
PPHMHJPN_02019 3.1e-69 yxaM EGP Major facilitator Superfamily
PPHMHJPN_02020 2.9e-117 fbiB 6.3.2.12, 6.3.2.17, 6.3.2.31, 6.3.2.34 S F420-0:Gamma-glutamyl ligase
PPHMHJPN_02021 1e-79 S AAA domain
PPHMHJPN_02022 3.3e-61 3.6.1.55 F NUDIX domain
PPHMHJPN_02028 2.3e-103 M hydrolase, family 25
PPHMHJPN_02029 1.8e-38 S Bacteriophage holin of superfamily 6 (Holin_LLH)
PPHMHJPN_02037 3.8e-06 S Domain of unknown function (DUF2479)
PPHMHJPN_02039 0.0 S Phage minor structural protein
PPHMHJPN_02040 3.3e-109 S phage tail
PPHMHJPN_02041 0.0 xkdO D NLP P60 protein
PPHMHJPN_02042 1.6e-85 S Bacteriophage Gp15 protein
PPHMHJPN_02043 8.7e-35
PPHMHJPN_02044 3.5e-83 N domain, Protein
PPHMHJPN_02045 3e-51 S Minor capsid protein from bacteriophage
PPHMHJPN_02046 4e-31 S Minor capsid protein
PPHMHJPN_02047 1.6e-39 S Minor capsid protein
PPHMHJPN_02048 2.4e-44
PPHMHJPN_02049 4.6e-154 gpG
PPHMHJPN_02050 1e-36 S Phage minor structural protein GP20
PPHMHJPN_02052 2.2e-165 S Phage minor capsid protein 2
PPHMHJPN_02053 4.9e-216 S Phage portal protein, SPP1 Gp6-like
PPHMHJPN_02054 3.2e-215 S Terminase RNAseH like domain
PPHMHJPN_02055 8.3e-85 L transposase activity
PPHMHJPN_02056 5.4e-111 K Belongs to the N(4) N(6)-methyltransferase family
PPHMHJPN_02057 2.3e-30
PPHMHJPN_02059 2.2e-101 1.8.4.10, 1.8.4.8, 2.7.7.4 EH sulfate reduction
PPHMHJPN_02060 4.3e-24 S ASCH domain
PPHMHJPN_02061 2.9e-07
PPHMHJPN_02069 4.7e-55 dnaC L IstB-like ATP binding protein
PPHMHJPN_02070 1.7e-34 S Conserved phage C-terminus (Phg_2220_C)
PPHMHJPN_02071 2.2e-24 S Protein of unknown function (DUF1071)
PPHMHJPN_02072 5e-47 2.4.1.33 V HlyD family secretion protein
PPHMHJPN_02076 3e-134 S CAAX amino terminal protease
PPHMHJPN_02077 7.4e-40 S Enterocin A Immunity
PPHMHJPN_02078 0.0 pepF E oligoendopeptidase F
PPHMHJPN_02079 2.2e-208 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PPHMHJPN_02080 6.5e-125 S Protein of unknown function (DUF554)
PPHMHJPN_02081 8.2e-61
PPHMHJPN_02082 5.6e-19
PPHMHJPN_02083 1.2e-97 rimL J Acetyltransferase (GNAT) domain
PPHMHJPN_02084 8.3e-58
PPHMHJPN_02085 8.9e-292 S ABC transporter
PPHMHJPN_02086 2.4e-136 thrE S Putative threonine/serine exporter
PPHMHJPN_02087 1.1e-83 S Threonine/Serine exporter, ThrE
PPHMHJPN_02088 9.1e-112 yvpB S Peptidase_C39 like family
PPHMHJPN_02089 2.5e-68
PPHMHJPN_02090 9.9e-177 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PPHMHJPN_02091 5.5e-77 nrdI F NrdI Flavodoxin like
PPHMHJPN_02092 2.3e-223 tnpB L Putative transposase DNA-binding domain
PPHMHJPN_02093 3.3e-112
PPHMHJPN_02094 6.5e-279 S O-antigen ligase like membrane protein
PPHMHJPN_02095 3.9e-42
PPHMHJPN_02096 7.7e-89 gmk2 2.7.4.8 F Guanylate kinase homologues.
PPHMHJPN_02097 2e-89 M NlpC/P60 family
PPHMHJPN_02098 1.4e-136 M NlpC P60 family protein
PPHMHJPN_02099 2.6e-118 M NlpC/P60 family
PPHMHJPN_02100 3.5e-41
PPHMHJPN_02101 3.5e-175 S Cysteine-rich secretory protein family
PPHMHJPN_02102 1.5e-215 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PPHMHJPN_02104 1.7e-29 S Predicted membrane protein (DUF2335)
PPHMHJPN_02108 2e-25 K Helix-turn-helix XRE-family like proteins
PPHMHJPN_02109 1.2e-11
PPHMHJPN_02110 5.4e-214 2.1.1.14 E methionine synthase, vitamin-B12 independent
PPHMHJPN_02111 6.1e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PPHMHJPN_02112 1.1e-08 S CAAX amino terminal protease
PPHMHJPN_02113 6.5e-85 L Transposase
PPHMHJPN_02115 2.2e-102
PPHMHJPN_02116 7.9e-285 lsa S ABC transporter
PPHMHJPN_02117 1.5e-43
PPHMHJPN_02118 3.4e-123 sdaAB 4.3.1.17 E Serine dehydratase beta chain
PPHMHJPN_02119 8.5e-154 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PPHMHJPN_02120 3.3e-52 S Iron-sulfur cluster assembly protein
PPHMHJPN_02121 5.3e-163 L Transposase
PPHMHJPN_02122 1.2e-94 L Transposase
PPHMHJPN_02123 9.7e-136 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PPHMHJPN_02124 5.4e-242 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PPHMHJPN_02125 4.4e-222 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PPHMHJPN_02126 3.2e-278 yjeM E Amino Acid
PPHMHJPN_02127 4.5e-49 S Fic/DOC family
PPHMHJPN_02128 2.8e-08 S Fic/DOC family
PPHMHJPN_02129 2.7e-285
PPHMHJPN_02130 3.2e-77
PPHMHJPN_02131 2.9e-247 mntH P H( )-stimulated, divalent metal cation uptake system
PPHMHJPN_02132 3.1e-45 yitW S Iron-sulfur cluster assembly protein
PPHMHJPN_02133 2e-266 sufB O assembly protein SufB
PPHMHJPN_02134 2.4e-59 nifU C SUF system FeS assembly protein, NifU family
PPHMHJPN_02135 5.3e-178 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PPHMHJPN_02136 3.5e-174 sufD O FeS assembly protein SufD
PPHMHJPN_02137 2.8e-140 sufC O FeS assembly ATPase SufC
PPHMHJPN_02138 5e-125 C 2Fe-2S iron-sulfur cluster binding domain
PPHMHJPN_02139 2e-155 crtI 1.3.99.23, 5.2.1.13 Q HI0933-like protein
PPHMHJPN_02140 7.4e-52 K helix_turn_helix gluconate operon transcriptional repressor
PPHMHJPN_02141 7.2e-183 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PPHMHJPN_02142 6.5e-169 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PPHMHJPN_02143 2.8e-48 S Peptidase propeptide and YPEB domain
PPHMHJPN_02144 4.8e-138 L An automated process has identified a potential problem with this gene model
PPHMHJPN_02146 3.2e-139 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PPHMHJPN_02147 8.7e-86 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
PPHMHJPN_02148 2.2e-226 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PPHMHJPN_02149 2.8e-79 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PPHMHJPN_02150 8.9e-92 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PPHMHJPN_02151 2.4e-10 L Psort location Cytoplasmic, score
PPHMHJPN_02152 4.1e-141 aroD S Alpha/beta hydrolase family
PPHMHJPN_02153 2.2e-142 S Belongs to the UPF0246 family
PPHMHJPN_02154 9e-121
PPHMHJPN_02155 1.9e-157 2.7.7.12 C Domain of unknown function (DUF4931)
PPHMHJPN_02156 5e-226 L Transposase
PPHMHJPN_02157 3.4e-164 msmX P Belongs to the ABC transporter superfamily
PPHMHJPN_02158 2.8e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PPHMHJPN_02159 2.4e-121 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PPHMHJPN_02160 3.7e-185
PPHMHJPN_02161 6.1e-249 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PPHMHJPN_02162 1.5e-234 mepA V MATE efflux family protein
PPHMHJPN_02163 8.4e-171 S SLAP domain
PPHMHJPN_02164 7.4e-74 L Putative transposase DNA-binding domain
PPHMHJPN_02165 1.7e-84 L Putative transposase DNA-binding domain
PPHMHJPN_02166 1.4e-83 L Resolvase, N-terminal
PPHMHJPN_02167 1.2e-157 M Peptidase family M1 domain
PPHMHJPN_02168 8.8e-29
PPHMHJPN_02171 4.9e-111 K Helix-turn-helix XRE-family like proteins
PPHMHJPN_02172 4e-148 glcU U sugar transport
PPHMHJPN_02173 3.5e-248 lctP C L-lactate permease
PPHMHJPN_02174 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PPHMHJPN_02175 2.4e-211 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PPHMHJPN_02176 4e-245 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PPHMHJPN_02177 3.6e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PPHMHJPN_02178 4.2e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PPHMHJPN_02179 2.4e-167 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PPHMHJPN_02180 3.5e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PPHMHJPN_02181 1.9e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PPHMHJPN_02182 1.5e-102 GM NmrA-like family
PPHMHJPN_02183 3.4e-15 K FCD
PPHMHJPN_02184 4.7e-26 K FCD
PPHMHJPN_02185 1.6e-60 clcA P chloride
PPHMHJPN_02186 2.5e-118 clcA P chloride
PPHMHJPN_02187 5.4e-106 L PFAM Integrase catalytic
PPHMHJPN_02188 4e-56 L Transposase
PPHMHJPN_02189 8.2e-154 L Transposase
PPHMHJPN_02190 5.8e-85 2.3.1.128 K Acetyltransferase (GNAT) domain
PPHMHJPN_02191 7.8e-157 S reductase
PPHMHJPN_02192 2e-29
PPHMHJPN_02193 2.9e-287 K Putative DNA-binding domain
PPHMHJPN_02194 2.9e-238 pyrP F Permease
PPHMHJPN_02195 4.7e-91 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PPHMHJPN_02196 9.2e-262 emrY EGP Major facilitator Superfamily
PPHMHJPN_02197 1.1e-217 mdtG EGP Major facilitator Superfamily
PPHMHJPN_02198 6.9e-136
PPHMHJPN_02199 1.9e-43
PPHMHJPN_02200 1.7e-209 pepA E M42 glutamyl aminopeptidase
PPHMHJPN_02201 2.2e-311 ybiT S ABC transporter, ATP-binding protein
PPHMHJPN_02202 5.9e-174 S Aldo keto reductase

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)