ORF_ID e_value Gene_name EC_number CAZy COGs Description
PMCMCMFJ_00001 7.9e-285 lsa S ABC transporter
PMCMCMFJ_00002 1.5e-43
PMCMCMFJ_00003 3.4e-123 sdaAB 4.3.1.17 E Serine dehydratase beta chain
PMCMCMFJ_00004 8.5e-154 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PMCMCMFJ_00005 3.3e-52 S Iron-sulfur cluster assembly protein
PMCMCMFJ_00006 5.3e-163 L Transposase
PMCMCMFJ_00007 1.2e-94 L Transposase
PMCMCMFJ_00008 9.7e-136 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PMCMCMFJ_00009 5.4e-242 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PMCMCMFJ_00010 4.4e-222 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PMCMCMFJ_00011 3.2e-278 yjeM E Amino Acid
PMCMCMFJ_00012 4.5e-49 S Fic/DOC family
PMCMCMFJ_00013 2.8e-08 S Fic/DOC family
PMCMCMFJ_00014 3.1e-278
PMCMCMFJ_00015 3.2e-77
PMCMCMFJ_00016 5.3e-249 dtpT U amino acid peptide transporter
PMCMCMFJ_00017 5e-164 4.2.1.53 S Myosin-crossreactive antigen
PMCMCMFJ_00018 1.2e-177 4.2.1.53 S Myosin-crossreactive antigen
PMCMCMFJ_00019 2.3e-90 yxdD K Bacterial regulatory proteins, tetR family
PMCMCMFJ_00020 9.5e-259 emrY EGP Major facilitator Superfamily
PMCMCMFJ_00025 1.1e-94 MA20_25245 K Acetyltransferase (GNAT) domain
PMCMCMFJ_00026 5.8e-255 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PMCMCMFJ_00027 1.6e-199 pbpX V Beta-lactamase
PMCMCMFJ_00028 1.3e-230 nhaC C Na H antiporter NhaC
PMCMCMFJ_00029 4.5e-50
PMCMCMFJ_00030 1.2e-105 ybhL S Belongs to the BI1 family
PMCMCMFJ_00031 1.5e-65 K transcriptional regulator
PMCMCMFJ_00032 6e-18
PMCMCMFJ_00033 2.7e-171 yegS 2.7.1.107 G Lipid kinase
PMCMCMFJ_00034 4.1e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PMCMCMFJ_00035 1.5e-269 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PMCMCMFJ_00036 1.5e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PMCMCMFJ_00037 5.8e-203 camS S sex pheromone
PMCMCMFJ_00038 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PMCMCMFJ_00039 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PMCMCMFJ_00040 2.5e-86 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
PMCMCMFJ_00042 4.8e-84 ydcK S Belongs to the SprT family
PMCMCMFJ_00043 7.7e-134 M Glycosyltransferase sugar-binding region containing DXD motif
PMCMCMFJ_00044 3e-257 epsU S Polysaccharide biosynthesis protein
PMCMCMFJ_00045 7e-225 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PMCMCMFJ_00046 0.0 pacL 3.6.3.8 P P-type ATPase
PMCMCMFJ_00047 1.3e-202 tnpB L Putative transposase DNA-binding domain
PMCMCMFJ_00048 1.2e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PMCMCMFJ_00049 2.4e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PMCMCMFJ_00050 2.9e-204 csaB M Glycosyl transferases group 1
PMCMCMFJ_00051 1.2e-134 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PMCMCMFJ_00052 2e-49 L PFAM transposase, IS4 family protein
PMCMCMFJ_00053 0.0 1.3.5.4 C FAD binding domain
PMCMCMFJ_00054 2.8e-230 potE E amino acid
PMCMCMFJ_00055 1.7e-84 L Putative transposase DNA-binding domain
PMCMCMFJ_00056 7.4e-74 L Putative transposase DNA-binding domain
PMCMCMFJ_00057 8.4e-171 S SLAP domain
PMCMCMFJ_00058 1.5e-234 mepA V MATE efflux family protein
PMCMCMFJ_00059 6.1e-249 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PMCMCMFJ_00060 3.7e-185
PMCMCMFJ_00061 2.4e-121 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PMCMCMFJ_00062 2.8e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PMCMCMFJ_00063 9.9e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PMCMCMFJ_00064 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PMCMCMFJ_00065 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PMCMCMFJ_00066 4.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PMCMCMFJ_00067 4.4e-135 recO L Involved in DNA repair and RecF pathway recombination
PMCMCMFJ_00068 2.1e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PMCMCMFJ_00069 2.2e-93 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PMCMCMFJ_00070 2.5e-175 phoH T phosphate starvation-inducible protein PhoH
PMCMCMFJ_00071 3.5e-71 yqeY S YqeY-like protein
PMCMCMFJ_00072 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PMCMCMFJ_00073 1.2e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PMCMCMFJ_00074 1.5e-18 S CRISPR-associated protein (Cas_Csn2)
PMCMCMFJ_00075 8.1e-175 ulaG S Beta-lactamase superfamily domain
PMCMCMFJ_00076 1.5e-61 cmtB 2.7.1.194, 2.7.1.197, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PMCMCMFJ_00077 1.3e-231 ulaA S PTS system sugar-specific permease component
PMCMCMFJ_00078 1.8e-31 sgaB 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
PMCMCMFJ_00079 2.8e-90 ulaD 4.1.1.85, 4.1.2.43 G Orotidine 5'-phosphate decarboxylase / HUMPS family
PMCMCMFJ_00080 7.2e-129 ulaE 5.1.3.22 G Xylose isomerase-like TIM barrel
PMCMCMFJ_00081 4.9e-123 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
PMCMCMFJ_00082 5.2e-68 L haloacid dehalogenase-like hydrolase
PMCMCMFJ_00083 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PMCMCMFJ_00084 1.4e-16 L Transposase
PMCMCMFJ_00085 1.9e-12 L Transposase
PMCMCMFJ_00086 5.9e-13 K Acetyltransferase (GNAT) domain
PMCMCMFJ_00087 7e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PMCMCMFJ_00088 3.2e-181 ccpA K catabolite control protein A
PMCMCMFJ_00089 2.3e-267 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PMCMCMFJ_00090 4.3e-55
PMCMCMFJ_00091 9.8e-274 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PMCMCMFJ_00092 1.7e-105 yutD S Protein of unknown function (DUF1027)
PMCMCMFJ_00093 6.9e-144 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PMCMCMFJ_00094 3.7e-100 S Protein of unknown function (DUF1461)
PMCMCMFJ_00095 2.6e-115 dedA S SNARE-like domain protein
PMCMCMFJ_00096 8e-185 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
PMCMCMFJ_00097 6e-171 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PMCMCMFJ_00098 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PMCMCMFJ_00099 7.9e-99 M ErfK YbiS YcfS YnhG
PMCMCMFJ_00100 6.9e-153 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PMCMCMFJ_00101 1.6e-233 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PMCMCMFJ_00103 4.3e-47 pspC KT PspC domain
PMCMCMFJ_00104 6.8e-298 ytgP S Polysaccharide biosynthesis protein
PMCMCMFJ_00105 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PMCMCMFJ_00106 6.4e-122 3.6.1.27 I Acid phosphatase homologues
PMCMCMFJ_00107 2.6e-169 K LysR substrate binding domain
PMCMCMFJ_00108 1.6e-85 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PMCMCMFJ_00109 1.6e-43 1.3.5.4 C FAD binding domain
PMCMCMFJ_00110 1.2e-230 ndh 1.6.99.3 C NADH dehydrogenase
PMCMCMFJ_00111 3.6e-160 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PMCMCMFJ_00112 6.1e-177 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PMCMCMFJ_00113 2.2e-128 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PMCMCMFJ_00114 4.1e-269 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PMCMCMFJ_00115 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PMCMCMFJ_00116 2.5e-173 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
PMCMCMFJ_00117 6.4e-243 cydA 1.10.3.14 C ubiquinol oxidase
PMCMCMFJ_00118 4.3e-75
PMCMCMFJ_00119 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PMCMCMFJ_00120 1.3e-168 dnaI L Primosomal protein DnaI
PMCMCMFJ_00121 8.6e-251 dnaB L Replication initiation and membrane attachment
PMCMCMFJ_00122 3.9e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PMCMCMFJ_00123 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PMCMCMFJ_00124 9.4e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PMCMCMFJ_00125 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PMCMCMFJ_00126 3.8e-30
PMCMCMFJ_00128 2.2e-102
PMCMCMFJ_00129 2.8e-65 K LytTr DNA-binding domain
PMCMCMFJ_00130 1.2e-49 S Protein of unknown function (DUF3021)
PMCMCMFJ_00131 6.3e-105 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
PMCMCMFJ_00132 1.9e-118 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PMCMCMFJ_00133 6e-132 S membrane transporter protein
PMCMCMFJ_00134 3.7e-125 gpmB G Belongs to the phosphoglycerate mutase family
PMCMCMFJ_00135 7.3e-161 czcD P cation diffusion facilitator family transporter
PMCMCMFJ_00136 1.4e-23
PMCMCMFJ_00137 2.6e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PMCMCMFJ_00138 5.4e-183 S AAA domain
PMCMCMFJ_00139 3.3e-44
PMCMCMFJ_00140 4.3e-266 pepC 3.4.22.40 E Peptidase C1-like family
PMCMCMFJ_00141 2.7e-51
PMCMCMFJ_00142 3.3e-126 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PMCMCMFJ_00143 2.9e-221 ecsB U ABC transporter
PMCMCMFJ_00144 1.7e-134 ecsA V ABC transporter, ATP-binding protein
PMCMCMFJ_00145 8.3e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
PMCMCMFJ_00146 3.9e-25
PMCMCMFJ_00147 1.5e-153 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PMCMCMFJ_00148 1.5e-72 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
PMCMCMFJ_00149 2.6e-175
PMCMCMFJ_00150 1e-45
PMCMCMFJ_00151 2.4e-51 S Domain of unknown function DUF1829
PMCMCMFJ_00152 2.9e-23
PMCMCMFJ_00153 1.9e-186 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
PMCMCMFJ_00154 0.0 L AAA domain
PMCMCMFJ_00155 1.5e-230 yhaO L Ser Thr phosphatase family protein
PMCMCMFJ_00156 7.2e-56 yheA S Belongs to the UPF0342 family
PMCMCMFJ_00157 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PMCMCMFJ_00158 6.5e-151 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PMCMCMFJ_00159 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PMCMCMFJ_00160 8.9e-10 G Phosphoglycerate mutase family
PMCMCMFJ_00161 2.9e-78 G Phosphoglycerate mutase family
PMCMCMFJ_00162 1.6e-140 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PMCMCMFJ_00163 7.4e-128 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PMCMCMFJ_00164 1.8e-193 I transferase activity, transferring acyl groups other than amino-acyl groups
PMCMCMFJ_00165 5.6e-179 S PFAM Archaeal ATPase
PMCMCMFJ_00166 1.7e-30
PMCMCMFJ_00167 3e-21
PMCMCMFJ_00168 3.7e-83
PMCMCMFJ_00169 8.2e-31 yozG K Transcriptional regulator
PMCMCMFJ_00170 2e-23
PMCMCMFJ_00171 1.7e-67
PMCMCMFJ_00172 1.1e-164 natA S ABC transporter, ATP-binding protein
PMCMCMFJ_00173 1.8e-218 natB CP ABC-2 family transporter protein
PMCMCMFJ_00174 1.8e-136 fruR K DeoR C terminal sensor domain
PMCMCMFJ_00175 2.2e-168 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PMCMCMFJ_00176 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
PMCMCMFJ_00177 5.4e-41 K helix_turn_helix, Arsenical Resistance Operon Repressor
PMCMCMFJ_00178 1.4e-148 psaA P Belongs to the bacterial solute-binding protein 9 family
PMCMCMFJ_00179 1.6e-117 fhuC P ABC transporter
PMCMCMFJ_00180 5e-129 znuB U ABC 3 transport family
PMCMCMFJ_00181 7.7e-10 C Flavodoxin
PMCMCMFJ_00182 3.2e-79 S X-Pro dipeptidyl-peptidase (S15 family)
PMCMCMFJ_00183 3.3e-45 K Tetracycline repressor, C-terminal all-alpha domain
PMCMCMFJ_00185 6.6e-90 K LysR substrate binding domain
PMCMCMFJ_00186 8.9e-34 S Domain of unknown function (DUF4440)
PMCMCMFJ_00187 1.3e-68 GM NAD(P)H-binding
PMCMCMFJ_00188 7e-135 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PMCMCMFJ_00189 1.2e-49 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PMCMCMFJ_00190 5.1e-71 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
PMCMCMFJ_00191 6.6e-125 gntR1 K UTRA
PMCMCMFJ_00192 2.5e-179
PMCMCMFJ_00193 1.9e-300 oppA2 E ABC transporter, substratebinding protein
PMCMCMFJ_00196 1.1e-240 npr 1.11.1.1 C NADH oxidase
PMCMCMFJ_00197 7.7e-12
PMCMCMFJ_00198 3.7e-22 3.6.4.12 S transposase or invertase
PMCMCMFJ_00199 6.7e-228 slpX S SLAP domain
PMCMCMFJ_00200 4.4e-144 K SIS domain
PMCMCMFJ_00201 8.1e-120 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PMCMCMFJ_00202 2.7e-185 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
PMCMCMFJ_00203 6.5e-210 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
PMCMCMFJ_00205 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PMCMCMFJ_00207 1.2e-115 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PMCMCMFJ_00208 2.5e-118 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
PMCMCMFJ_00209 2.6e-89 G Histidine phosphatase superfamily (branch 1)
PMCMCMFJ_00210 1.2e-105 G Phosphoglycerate mutase family
PMCMCMFJ_00211 1.1e-158 D nuclear chromosome segregation
PMCMCMFJ_00212 5.8e-78 M LysM domain protein
PMCMCMFJ_00213 2.3e-309 oppA3 E ABC transporter, substratebinding protein
PMCMCMFJ_00214 2.4e-60 ypaA S Protein of unknown function (DUF1304)
PMCMCMFJ_00215 2.1e-28 S Peptidase propeptide and YPEB domain
PMCMCMFJ_00216 9.9e-82 C Flavodoxin
PMCMCMFJ_00217 0.0 uvrA3 L excinuclease ABC, A subunit
PMCMCMFJ_00218 1.1e-189 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PMCMCMFJ_00219 2.1e-114 3.6.1.27 I Acid phosphatase homologues
PMCMCMFJ_00220 1.2e-94
PMCMCMFJ_00221 3.4e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
PMCMCMFJ_00222 9.7e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PMCMCMFJ_00223 4.1e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PMCMCMFJ_00224 7e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PMCMCMFJ_00225 4e-98 dnaQ 2.7.7.7 L DNA polymerase III
PMCMCMFJ_00226 2e-163 murB 1.3.1.98 M Cell wall formation
PMCMCMFJ_00227 1.8e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PMCMCMFJ_00228 1.3e-129 potB P ABC transporter permease
PMCMCMFJ_00229 4.8e-127 potC P ABC transporter permease
PMCMCMFJ_00230 7.3e-208 potD P ABC transporter
PMCMCMFJ_00231 6.4e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PMCMCMFJ_00232 2e-172 ybbR S YbbR-like protein
PMCMCMFJ_00233 3.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PMCMCMFJ_00234 1.4e-147 S hydrolase
PMCMCMFJ_00235 1.8e-75 K Penicillinase repressor
PMCMCMFJ_00236 1.4e-117
PMCMCMFJ_00237 7.4e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PMCMCMFJ_00238 3.8e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PMCMCMFJ_00239 8.3e-143 licT K CAT RNA binding domain
PMCMCMFJ_00240 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
PMCMCMFJ_00241 9.1e-302 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PMCMCMFJ_00242 6.9e-178 D Alpha beta
PMCMCMFJ_00243 2.8e-304 E Amino acid permease
PMCMCMFJ_00245 9.8e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PMCMCMFJ_00246 5.1e-108 ylbE GM NAD(P)H-binding
PMCMCMFJ_00247 2.9e-93 S VanZ like family
PMCMCMFJ_00248 8.9e-133 yebC K Transcriptional regulatory protein
PMCMCMFJ_00249 1.7e-179 comGA NU Type II IV secretion system protein
PMCMCMFJ_00250 1.7e-171 comGB NU type II secretion system
PMCMCMFJ_00251 3.1e-43 comGC U competence protein ComGC
PMCMCMFJ_00252 7.4e-71
PMCMCMFJ_00253 8.6e-41
PMCMCMFJ_00254 9.4e-76 comGF U Putative Competence protein ComGF
PMCMCMFJ_00255 1.6e-21
PMCMCMFJ_00256 3.5e-188 ytxK 2.1.1.72 L N-6 DNA Methylase
PMCMCMFJ_00257 6.3e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PMCMCMFJ_00259 1.8e-153 L Belongs to the 'phage' integrase family
PMCMCMFJ_00260 5e-08 S Pfam:DUF955
PMCMCMFJ_00261 1.2e-23 K Helix-turn-helix domain
PMCMCMFJ_00262 9e-22 XK27_07105 K Helix-turn-helix XRE-family like proteins
PMCMCMFJ_00263 2.6e-31 K Helix-turn-helix domain
PMCMCMFJ_00265 4.1e-09 S Arc-like DNA binding domain
PMCMCMFJ_00267 9e-21 K Conserved phage C-terminus (Phg_2220_C)
PMCMCMFJ_00268 1e-25 S Domain of unknown function (DUF771)
PMCMCMFJ_00275 2.6e-11 ssb L Single-strand binding protein family
PMCMCMFJ_00281 9.2e-24 srtA 3.4.22.70 M sortase family
PMCMCMFJ_00283 1.3e-39 M domain protein
PMCMCMFJ_00284 6.8e-15 S SLAP domain
PMCMCMFJ_00285 1.3e-30 M domain protein
PMCMCMFJ_00289 2.4e-141 U TraM recognition site of TraD and TraG
PMCMCMFJ_00290 3.9e-32 I mechanosensitive ion channel activity
PMCMCMFJ_00292 2.2e-15
PMCMCMFJ_00293 8.1e-160 trsE S COG0433 Predicted ATPase
PMCMCMFJ_00294 1.2e-32 M Peptidase family M23
PMCMCMFJ_00297 2.4e-18 CO COG0526, thiol-disulfide isomerase and thioredoxins
PMCMCMFJ_00303 3.4e-52 S COG0790 FOG TPR repeat, SEL1 subfamily
PMCMCMFJ_00304 1.7e-39 L Protein of unknown function (DUF3991)
PMCMCMFJ_00305 2.1e-111 S Fic/DOC family
PMCMCMFJ_00306 1.8e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
PMCMCMFJ_00307 2.7e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PMCMCMFJ_00308 1.9e-291 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PMCMCMFJ_00309 2.9e-276 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PMCMCMFJ_00310 6.7e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PMCMCMFJ_00311 6.6e-139 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PMCMCMFJ_00312 4.2e-95 sigH K Belongs to the sigma-70 factor family
PMCMCMFJ_00313 1.7e-34
PMCMCMFJ_00314 1.9e-286 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
PMCMCMFJ_00315 2.1e-70 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PMCMCMFJ_00316 1.6e-246 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PMCMCMFJ_00317 3.6e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PMCMCMFJ_00318 3.1e-101 nusG K Participates in transcription elongation, termination and antitermination
PMCMCMFJ_00319 1.2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PMCMCMFJ_00320 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PMCMCMFJ_00321 2.8e-157 pstS P Phosphate
PMCMCMFJ_00322 4.3e-162 pstC P probably responsible for the translocation of the substrate across the membrane
PMCMCMFJ_00323 1e-154 pstA P Phosphate transport system permease protein PstA
PMCMCMFJ_00324 5e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PMCMCMFJ_00325 3.9e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PMCMCMFJ_00326 2.2e-117 phoU P Plays a role in the regulation of phosphate uptake
PMCMCMFJ_00327 2.8e-90 L An automated process has identified a potential problem with this gene model
PMCMCMFJ_00328 3.3e-11 GT2,GT4 M family 8
PMCMCMFJ_00329 7e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PMCMCMFJ_00330 1.8e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PMCMCMFJ_00331 1.5e-139 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
PMCMCMFJ_00332 1.3e-116 rsmC 2.1.1.172 J Methyltransferase
PMCMCMFJ_00333 9e-26
PMCMCMFJ_00334 5.3e-84 S Protein of unknown function (DUF805)
PMCMCMFJ_00335 5.6e-68 O OsmC-like protein
PMCMCMFJ_00336 6.7e-207 EGP Major facilitator Superfamily
PMCMCMFJ_00337 2.5e-215 sptS 2.7.13.3 T Histidine kinase
PMCMCMFJ_00338 1.3e-65 K response regulator
PMCMCMFJ_00339 6e-27 K response regulator
PMCMCMFJ_00340 7.5e-109 2.7.6.5 T Region found in RelA / SpoT proteins
PMCMCMFJ_00341 6.2e-271 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
PMCMCMFJ_00342 0.0 rafA 3.2.1.22 G alpha-galactosidase
PMCMCMFJ_00343 2.8e-210 msmX P Belongs to the ABC transporter superfamily
PMCMCMFJ_00344 2e-152 msmG P Binding-protein-dependent transport system inner membrane component
PMCMCMFJ_00345 4.8e-157 msmF P Binding-protein-dependent transport system inner membrane component
PMCMCMFJ_00346 2.3e-237 msmE G Bacterial extracellular solute-binding protein
PMCMCMFJ_00347 1.6e-158 scrR K Periplasmic binding protein domain
PMCMCMFJ_00348 5.5e-36
PMCMCMFJ_00349 2.2e-198 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PMCMCMFJ_00351 5.7e-166 psaA P Belongs to the bacterial solute-binding protein 9 family
PMCMCMFJ_00354 8.7e-218 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PMCMCMFJ_00355 2.4e-246 qacA EGP Major facilitator Superfamily
PMCMCMFJ_00356 0.0 sacX 2.7.1.208, 2.7.1.211 G phosphotransferase system
PMCMCMFJ_00357 3.1e-151 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PMCMCMFJ_00358 1.4e-183 yfeW 3.4.16.4 V Beta-lactamase
PMCMCMFJ_00359 3.1e-187 S Bacterial protein of unknown function (DUF871)
PMCMCMFJ_00360 4.5e-144 ybbH_2 K rpiR family
PMCMCMFJ_00361 7e-23 cydA 1.10.3.14 C ubiquinol oxidase
PMCMCMFJ_00362 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PMCMCMFJ_00363 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PMCMCMFJ_00364 1.7e-29 secG U Preprotein translocase
PMCMCMFJ_00365 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PMCMCMFJ_00366 8.3e-177 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PMCMCMFJ_00367 9.9e-202 cpoA GT4 M Glycosyltransferase, group 1 family protein
PMCMCMFJ_00368 7.9e-224 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
PMCMCMFJ_00380 5.1e-181 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
PMCMCMFJ_00381 3e-130 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PMCMCMFJ_00382 8.3e-40 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PMCMCMFJ_00383 4e-40 S CRISPR-associated protein (Cas_Csn2)
PMCMCMFJ_00384 2.2e-89
PMCMCMFJ_00385 1.1e-08 isdH M Iron Transport-associated domain
PMCMCMFJ_00386 6.3e-123 M Iron Transport-associated domain
PMCMCMFJ_00387 8.7e-159 isdE P Periplasmic binding protein
PMCMCMFJ_00388 9.5e-148 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PMCMCMFJ_00389 6.7e-139 fhuC 3.6.3.34 HP abc transporter atp-binding protein
PMCMCMFJ_00390 6.7e-44 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PMCMCMFJ_00391 3.4e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
PMCMCMFJ_00392 1.3e-38 S RelB antitoxin
PMCMCMFJ_00393 5.2e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
PMCMCMFJ_00394 0.0 S membrane
PMCMCMFJ_00395 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
PMCMCMFJ_00396 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PMCMCMFJ_00397 2.7e-97 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PMCMCMFJ_00398 4e-119 gluP 3.4.21.105 S Rhomboid family
PMCMCMFJ_00399 9.7e-36 yqgQ S Bacterial protein of unknown function (DUF910)
PMCMCMFJ_00400 1.5e-65 yqhL P Rhodanese-like protein
PMCMCMFJ_00401 1.5e-167 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PMCMCMFJ_00402 7.6e-225 ynbB 4.4.1.1 P aluminum resistance
PMCMCMFJ_00403 2e-263 glnA 6.3.1.2 E glutamine synthetase
PMCMCMFJ_00404 6.7e-170
PMCMCMFJ_00405 6e-148
PMCMCMFJ_00406 1.9e-21
PMCMCMFJ_00409 2.7e-34
PMCMCMFJ_00410 1.2e-128 S interspecies interaction between organisms
PMCMCMFJ_00412 9.1e-10 K peptidyl-tyrosine sulfation
PMCMCMFJ_00413 7.1e-263 E ABC transporter, substratebinding protein
PMCMCMFJ_00414 3.7e-66 K Helix-turn-helix domain, rpiR family
PMCMCMFJ_00415 2.9e-122 nanA 4.1.3.3, 4.3.3.7 EM Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
PMCMCMFJ_00416 8.4e-90 nanK GK ROK family
PMCMCMFJ_00417 3.1e-56 G Xylose isomerase domain protein TIM barrel
PMCMCMFJ_00418 2.1e-120 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PMCMCMFJ_00419 1e-220 nanT E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PMCMCMFJ_00420 1.3e-67 axe1 3.1.1.41 Q Acetyl xylan esterase (AXE1)
PMCMCMFJ_00421 5.7e-24 axe1 3.1.1.41 Q Acetyl xylan esterase (AXE1)
PMCMCMFJ_00422 7.7e-110 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PMCMCMFJ_00423 2.8e-125 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PMCMCMFJ_00424 1.4e-107 yisY 1.11.1.10 S Alpha/beta hydrolase family
PMCMCMFJ_00425 3.5e-108 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PMCMCMFJ_00426 6.1e-111 crt 4.2.1.17 I Enoyl-CoA hydratase/isomerase
PMCMCMFJ_00427 9.3e-151 fabK 1.3.1.9 S Nitronate monooxygenase
PMCMCMFJ_00428 1.6e-82 2.8.3.1 I Coenzyme A transferase
PMCMCMFJ_00429 1.1e-149 2.8.3.1 I Coenzyme A transferase
PMCMCMFJ_00430 3.7e-144 gltC_1 3.1.3.48 K LysR substrate binding domain
PMCMCMFJ_00431 1.5e-54 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PMCMCMFJ_00432 3.2e-75 S ECF transporter, substrate-specific component
PMCMCMFJ_00434 9.3e-74 coaA 2.7.1.33 F Pantothenic acid kinase
PMCMCMFJ_00435 1.4e-31 O OsmC-like protein
PMCMCMFJ_00437 1.5e-36 oppA E ABC transporter substrate-binding protein
PMCMCMFJ_00438 1.5e-152
PMCMCMFJ_00439 2.7e-268 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
PMCMCMFJ_00440 2.7e-135 glvR K Helix-turn-helix domain, rpiR family
PMCMCMFJ_00441 1.5e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
PMCMCMFJ_00442 1.4e-37 S Putative adhesin
PMCMCMFJ_00443 3.7e-261 V ABC transporter transmembrane region
PMCMCMFJ_00444 1.1e-139
PMCMCMFJ_00445 1.8e-31
PMCMCMFJ_00448 8.1e-37
PMCMCMFJ_00449 7.8e-56 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PMCMCMFJ_00450 1.8e-44 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PMCMCMFJ_00451 0.0 copA 3.6.3.54 P P-type ATPase
PMCMCMFJ_00452 8.2e-114 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
PMCMCMFJ_00453 1.2e-105
PMCMCMFJ_00454 7e-248 EGP Sugar (and other) transporter
PMCMCMFJ_00455 1.2e-18
PMCMCMFJ_00456 2.8e-210
PMCMCMFJ_00457 3.5e-136 S SLAP domain
PMCMCMFJ_00458 1.3e-117 S SLAP domain
PMCMCMFJ_00459 1.1e-106 S Bacteriocin helveticin-J
PMCMCMFJ_00460 5.7e-44
PMCMCMFJ_00461 3.7e-58 ps115 K Helix-turn-helix XRE-family like proteins
PMCMCMFJ_00462 3.6e-33 E Zn peptidase
PMCMCMFJ_00463 3.9e-287 clcA P chloride
PMCMCMFJ_00464 3.1e-275 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PMCMCMFJ_00465 1.6e-31
PMCMCMFJ_00466 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PMCMCMFJ_00467 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PMCMCMFJ_00468 2.1e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PMCMCMFJ_00469 8.4e-146 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PMCMCMFJ_00470 3.5e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PMCMCMFJ_00471 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PMCMCMFJ_00480 1.8e-38 S Bacteriophage holin of superfamily 6 (Holin_LLH)
PMCMCMFJ_00481 2.3e-103 M hydrolase, family 25
PMCMCMFJ_00486 1.6e-61
PMCMCMFJ_00487 1.1e-248 celD G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMCMCMFJ_00488 3.2e-71 S Domain of unknown function (DUF3284)
PMCMCMFJ_00489 5.4e-302 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PMCMCMFJ_00490 4.2e-119 gmuR K UTRA
PMCMCMFJ_00491 3.7e-223 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMCMCMFJ_00492 5.8e-274 bglA3 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PMCMCMFJ_00493 9.2e-137 ypbG 2.7.1.2 GK ROK family
PMCMCMFJ_00494 4.4e-36 C nitroreductase
PMCMCMFJ_00495 8e-38 C nitroreductase
PMCMCMFJ_00496 7.5e-91 S Domain of unknown function (DUF4767)
PMCMCMFJ_00497 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PMCMCMFJ_00498 2.2e-151 yitS S Uncharacterised protein, DegV family COG1307
PMCMCMFJ_00499 4.6e-100 3.6.1.27 I Acid phosphatase homologues
PMCMCMFJ_00500 4.2e-178 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PMCMCMFJ_00502 1.6e-172 MA20_14895 S Conserved hypothetical protein 698
PMCMCMFJ_00503 6.3e-26 XK26_02160 S Pyridoxamine 5'-phosphate oxidase
PMCMCMFJ_00504 1.9e-30 XK26_02160 S Pyridoxamine 5'-phosphate oxidase
PMCMCMFJ_00505 1e-284 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
PMCMCMFJ_00506 1.2e-30 copZ C Heavy-metal-associated domain
PMCMCMFJ_00507 1.6e-78 dps P Belongs to the Dps family
PMCMCMFJ_00508 1.9e-86 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
PMCMCMFJ_00509 2e-129 yobV1 K WYL domain
PMCMCMFJ_00510 1.8e-55 S pyridoxamine 5-phosphate
PMCMCMFJ_00511 3.8e-84 dps P Belongs to the Dps family
PMCMCMFJ_00512 8.3e-210 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PMCMCMFJ_00513 1.1e-146 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PMCMCMFJ_00514 8.9e-187 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PMCMCMFJ_00515 2.3e-198 oppD P Belongs to the ABC transporter superfamily
PMCMCMFJ_00516 1.9e-175 oppF P Belongs to the ABC transporter superfamily
PMCMCMFJ_00517 5.2e-256 pepC 3.4.22.40 E aminopeptidase
PMCMCMFJ_00518 2.9e-67 hsp O Belongs to the small heat shock protein (HSP20) family
PMCMCMFJ_00519 7.5e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PMCMCMFJ_00520 7.9e-112
PMCMCMFJ_00522 1.2e-111 E Belongs to the SOS response-associated peptidase family
PMCMCMFJ_00523 3.7e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PMCMCMFJ_00524 1.8e-89 comEB 3.5.4.12 F MafB19-like deaminase
PMCMCMFJ_00525 2e-103 S TPM domain
PMCMCMFJ_00526 1.5e-132 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PMCMCMFJ_00527 1e-307 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PMCMCMFJ_00528 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PMCMCMFJ_00529 1e-147 tatD L hydrolase, TatD family
PMCMCMFJ_00530 1e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PMCMCMFJ_00531 3e-151 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PMCMCMFJ_00532 4.5e-39 veg S Biofilm formation stimulator VEG
PMCMCMFJ_00533 1.1e-147 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
PMCMCMFJ_00534 1.3e-172 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PMCMCMFJ_00535 7e-83 S Phage portal protein
PMCMCMFJ_00536 1.4e-74 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
PMCMCMFJ_00537 3.5e-50 S peptidase activity
PMCMCMFJ_00538 7.3e-17 S Phage gp6-like head-tail connector protein
PMCMCMFJ_00540 4.1e-23 S Bacteriophage HK97-gp10, putative tail-component
PMCMCMFJ_00541 8.1e-13 S Protein of unknown function (DUF806)
PMCMCMFJ_00542 1e-25 S Phage tail tube protein
PMCMCMFJ_00545 7e-158 M Phage tail tape measure protein TP901
PMCMCMFJ_00546 1.1e-37 S phage tail
PMCMCMFJ_00547 2.3e-49 S Phage minor structural protein
PMCMCMFJ_00548 8.9e-113 S Phage minor structural protein
PMCMCMFJ_00551 6.4e-55 E GDSL-like Lipase/Acylhydrolase
PMCMCMFJ_00555 2.2e-69 lysA2 M Glycosyl hydrolases family 25
PMCMCMFJ_00556 1e-104 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PMCMCMFJ_00557 2e-117 S Peptidase family M23
PMCMCMFJ_00558 1.9e-157 2.7.7.12 C Domain of unknown function (DUF4931)
PMCMCMFJ_00559 9e-121
PMCMCMFJ_00560 2.2e-142 S Belongs to the UPF0246 family
PMCMCMFJ_00561 4.1e-141 aroD S Alpha/beta hydrolase family
PMCMCMFJ_00562 1.1e-56 S Protein of unknown function (DUF3290)
PMCMCMFJ_00563 3e-116 yviA S Protein of unknown function (DUF421)
PMCMCMFJ_00564 5.8e-157 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PMCMCMFJ_00565 1e-181 dnaQ 2.7.7.7 L EXOIII
PMCMCMFJ_00566 1.9e-158 endA F DNA RNA non-specific endonuclease
PMCMCMFJ_00567 1.6e-282 pipD E Dipeptidase
PMCMCMFJ_00568 9.3e-203 malK P ATPases associated with a variety of cellular activities
PMCMCMFJ_00569 1.6e-157 gtsB P ABC-type sugar transport systems, permease components
PMCMCMFJ_00570 6.1e-146 gtsC P Binding-protein-dependent transport system inner membrane component
PMCMCMFJ_00571 2.4e-258 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
PMCMCMFJ_00572 5.1e-240 G Bacterial extracellular solute-binding protein
PMCMCMFJ_00573 1.8e-154 corA P CorA-like Mg2+ transporter protein
PMCMCMFJ_00574 3.3e-148 3.5.2.6 V Beta-lactamase enzyme family
PMCMCMFJ_00575 1.5e-98 yobS K Bacterial regulatory proteins, tetR family
PMCMCMFJ_00576 0.0 ydgH S MMPL family
PMCMCMFJ_00577 3.4e-107
PMCMCMFJ_00578 0.0 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PMCMCMFJ_00579 2e-37 scrR K Periplasmic binding protein domain
PMCMCMFJ_00580 2.8e-33 scrR K Periplasmic binding protein domain
PMCMCMFJ_00581 1.4e-69 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PMCMCMFJ_00582 1.5e-225 N Uncharacterized conserved protein (DUF2075)
PMCMCMFJ_00583 4.8e-205 pbpX1 V Beta-lactamase
PMCMCMFJ_00584 0.0 L Helicase C-terminal domain protein
PMCMCMFJ_00585 1.3e-273 E amino acid
PMCMCMFJ_00586 1.8e-158 xth 3.1.11.2 L exodeoxyribonuclease III
PMCMCMFJ_00589 1.4e-192 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMCMCMFJ_00590 7.6e-134 EGP Major facilitator Superfamily
PMCMCMFJ_00591 4e-150 3.1.3.102, 3.1.3.104 S haloacid dehalogenase-like hydrolase
PMCMCMFJ_00592 0.0 tetP J elongation factor G
PMCMCMFJ_00593 1.2e-160 yvgN C Aldo keto reductase
PMCMCMFJ_00594 2e-155 P CorA-like Mg2+ transporter protein
PMCMCMFJ_00595 5.6e-132 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PMCMCMFJ_00596 1.7e-174 ABC-SBP S ABC transporter
PMCMCMFJ_00597 5.6e-121 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PMCMCMFJ_00598 2.4e-136 XK27_08845 S ABC transporter, ATP-binding protein
PMCMCMFJ_00599 5.2e-248 G Major Facilitator
PMCMCMFJ_00600 4.1e-18
PMCMCMFJ_00601 2.6e-103 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
PMCMCMFJ_00602 6.4e-177 K AI-2E family transporter
PMCMCMFJ_00603 2.7e-109 oppA E ABC transporter substrate-binding protein
PMCMCMFJ_00604 1.2e-210 oppA E ABC transporter substrate-binding protein
PMCMCMFJ_00605 5.2e-117 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PMCMCMFJ_00606 0.0 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PMCMCMFJ_00607 9.6e-28 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PMCMCMFJ_00609 2.3e-25 M domain protein
PMCMCMFJ_00610 1.4e-39
PMCMCMFJ_00612 1.9e-250 yjjP S Putative threonine/serine exporter
PMCMCMFJ_00613 2.6e-177 citR K Putative sugar-binding domain
PMCMCMFJ_00614 3.8e-51
PMCMCMFJ_00615 5.5e-09
PMCMCMFJ_00616 2.9e-66 S Domain of unknown function DUF1828
PMCMCMFJ_00617 7.3e-21 hicA S HicA toxin of bacterial toxin-antitoxin,
PMCMCMFJ_00618 2.8e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PMCMCMFJ_00619 6.4e-251 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PMCMCMFJ_00620 7.7e-188 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PMCMCMFJ_00623 3.9e-206 4.2.1.126 S Bacterial protein of unknown function (DUF871)
PMCMCMFJ_00624 3.2e-189 asnA 6.3.1.1 F aspartate--ammonia ligase
PMCMCMFJ_00625 1.8e-230 steT_1 E amino acid
PMCMCMFJ_00626 2.2e-139 puuD S peptidase C26
PMCMCMFJ_00628 2.4e-172 V HNH endonuclease
PMCMCMFJ_00629 6.4e-135 S PFAM Archaeal ATPase
PMCMCMFJ_00630 9.2e-248 yifK E Amino acid permease
PMCMCMFJ_00631 9.7e-234 cycA E Amino acid permease
PMCMCMFJ_00632 4.3e-115 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PMCMCMFJ_00633 0.0 clpE O AAA domain (Cdc48 subfamily)
PMCMCMFJ_00634 2.2e-165 S Alpha/beta hydrolase of unknown function (DUF915)
PMCMCMFJ_00635 2.2e-238 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMCMCMFJ_00636 5.1e-125 XK27_06785 V ABC transporter, ATP-binding protein
PMCMCMFJ_00637 0.0 XK27_06780 V ABC transporter permease
PMCMCMFJ_00638 1.9e-36
PMCMCMFJ_00639 7.9e-291 ytgP S Polysaccharide biosynthesis protein
PMCMCMFJ_00640 2.7e-137 lysA2 M Glycosyl hydrolases family 25
PMCMCMFJ_00641 2.3e-133 S Protein of unknown function (DUF975)
PMCMCMFJ_00642 2.9e-176 pbpX2 V Beta-lactamase
PMCMCMFJ_00643 1.5e-247 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PMCMCMFJ_00644 1.7e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PMCMCMFJ_00645 1.9e-236 dltB M MBOAT, membrane-bound O-acyltransferase family
PMCMCMFJ_00646 2.1e-285 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PMCMCMFJ_00647 1.2e-18 S D-Ala-teichoic acid biosynthesis protein
PMCMCMFJ_00648 4.1e-44
PMCMCMFJ_00649 1e-207 ywhK S Membrane
PMCMCMFJ_00650 1.5e-80 ykuL S (CBS) domain
PMCMCMFJ_00651 0.0 cadA P P-type ATPase
PMCMCMFJ_00652 2.8e-205 napA P Sodium/hydrogen exchanger family
PMCMCMFJ_00653 1.9e-47 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PMCMCMFJ_00654 2.3e-41 S YoeB-like toxin of bacterial type II toxin-antitoxin system
PMCMCMFJ_00655 4.1e-276 V ABC transporter transmembrane region
PMCMCMFJ_00656 2.6e-155 mutR K Helix-turn-helix XRE-family like proteins
PMCMCMFJ_00657 5.4e-51
PMCMCMFJ_00658 4.2e-154 EGP Major facilitator Superfamily
PMCMCMFJ_00659 1.6e-109 ropB K Transcriptional regulator
PMCMCMFJ_00660 9.1e-121 S CAAX protease self-immunity
PMCMCMFJ_00661 3.7e-191 S DUF218 domain
PMCMCMFJ_00662 0.0 macB_3 V ABC transporter, ATP-binding protein
PMCMCMFJ_00663 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PMCMCMFJ_00664 2.8e-100 S ECF transporter, substrate-specific component
PMCMCMFJ_00665 2.3e-201 tcsA S ABC transporter substrate-binding protein PnrA-like
PMCMCMFJ_00666 6.9e-181 tcsA S ABC transporter substrate-binding protein PnrA-like
PMCMCMFJ_00667 1.5e-283 xylG 3.6.3.17 S ABC transporter
PMCMCMFJ_00668 1.9e-198 yufP S Belongs to the binding-protein-dependent transport system permease family
PMCMCMFJ_00669 4.4e-172 yufQ S Belongs to the binding-protein-dependent transport system permease family
PMCMCMFJ_00670 1.1e-68 yeaE S Aldo/keto reductase family
PMCMCMFJ_00671 1.8e-77 yeaE S Aldo/keto reductase family
PMCMCMFJ_00672 2.1e-134 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PMCMCMFJ_00673 8.5e-119 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PMCMCMFJ_00674 9.3e-124 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PMCMCMFJ_00675 2.7e-71
PMCMCMFJ_00676 7e-139 cof S haloacid dehalogenase-like hydrolase
PMCMCMFJ_00677 2.2e-230 pbuG S permease
PMCMCMFJ_00678 2.1e-76 S ABC-2 family transporter protein
PMCMCMFJ_00679 4.7e-60 S ABC-2 family transporter protein
PMCMCMFJ_00680 1.7e-93 V ABC transporter, ATP-binding protein
PMCMCMFJ_00681 1.5e-95 S UPF0397 protein
PMCMCMFJ_00682 0.0 ykoD P ABC transporter, ATP-binding protein
PMCMCMFJ_00683 1.2e-144 cbiQ P cobalt transport
PMCMCMFJ_00684 1.8e-22
PMCMCMFJ_00685 7.9e-71 yeaL S Protein of unknown function (DUF441)
PMCMCMFJ_00686 9.2e-289 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
PMCMCMFJ_00687 3.8e-165 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
PMCMCMFJ_00688 1.2e-43 citD C Covalent carrier of the coenzyme of citrate lyase
PMCMCMFJ_00689 6.9e-195 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PMCMCMFJ_00690 1.1e-152 ydjP I Alpha/beta hydrolase family
PMCMCMFJ_00691 4.7e-274 P Sodium:sulfate symporter transmembrane region
PMCMCMFJ_00692 1.3e-133 hxlA 6.2.1.3 H Aldolase/RraA
PMCMCMFJ_00693 4.1e-253 pepC 3.4.22.40 E Peptidase C1-like family
PMCMCMFJ_00694 3.1e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PMCMCMFJ_00695 1.9e-261 frdC 1.3.5.4 C FAD binding domain
PMCMCMFJ_00696 9e-267 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PMCMCMFJ_00697 2e-73 metI P ABC transporter permease
PMCMCMFJ_00698 1e-190 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PMCMCMFJ_00699 1e-159 metQ2 P Belongs to the nlpA lipoprotein family
PMCMCMFJ_00700 5.8e-177 F DNA/RNA non-specific endonuclease
PMCMCMFJ_00701 0.0 aha1 P E1-E2 ATPase
PMCMCMFJ_00702 1.2e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PMCMCMFJ_00703 3.1e-178 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PMCMCMFJ_00704 2.4e-251 yifK E Amino acid permease
PMCMCMFJ_00705 7.6e-242 V ABC-type multidrug transport system, ATPase and permease components
PMCMCMFJ_00706 2.6e-286 P ABC transporter
PMCMCMFJ_00707 1.5e-36
PMCMCMFJ_00709 1.4e-124 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
PMCMCMFJ_00710 6.5e-87 K GNAT family
PMCMCMFJ_00711 7.8e-202 XK27_00915 C Luciferase-like monooxygenase
PMCMCMFJ_00712 1.4e-34
PMCMCMFJ_00713 3.6e-63
PMCMCMFJ_00716 4.9e-118
PMCMCMFJ_00717 3.8e-104 pncA Q Isochorismatase family
PMCMCMFJ_00719 2.8e-35
PMCMCMFJ_00720 3.5e-205 G Glycosyl hydrolases family 8
PMCMCMFJ_00721 1.3e-246 ydaM M Glycosyl transferase
PMCMCMFJ_00723 1.7e-151
PMCMCMFJ_00724 5e-226 L Transposase
PMCMCMFJ_00725 3.4e-164 msmX P Belongs to the ABC transporter superfamily
PMCMCMFJ_00726 1.2e-126 K response regulator
PMCMCMFJ_00727 1.3e-277 arlS 2.7.13.3 T Histidine kinase
PMCMCMFJ_00728 1e-12
PMCMCMFJ_00729 9.2e-100 S CAAX protease self-immunity
PMCMCMFJ_00730 6.1e-224 S SLAP domain
PMCMCMFJ_00731 1.3e-82 S Aminoacyl-tRNA editing domain
PMCMCMFJ_00732 2.2e-163 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PMCMCMFJ_00733 2.4e-43 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PMCMCMFJ_00734 7.7e-135 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PMCMCMFJ_00735 4.5e-58 yodB K Transcriptional regulator, HxlR family
PMCMCMFJ_00737 2.7e-107 papP P ABC transporter, permease protein
PMCMCMFJ_00738 5.3e-116 P ABC transporter permease
PMCMCMFJ_00739 3.3e-127 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PMCMCMFJ_00740 6.2e-157 cjaA ET ABC transporter substrate-binding protein
PMCMCMFJ_00741 7.1e-200 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PMCMCMFJ_00742 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PMCMCMFJ_00743 4.9e-63 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PMCMCMFJ_00744 3.7e-168 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
PMCMCMFJ_00745 3.8e-136 metQ1 P Belongs to the nlpA lipoprotein family
PMCMCMFJ_00746 1.9e-25
PMCMCMFJ_00747 0.0 mco Q Multicopper oxidase
PMCMCMFJ_00748 1.2e-151 S Sucrose-6F-phosphate phosphohydrolase
PMCMCMFJ_00749 0.0 oppA E ABC transporter
PMCMCMFJ_00750 3.4e-73 Q Imidazolonepropionase and related amidohydrolases
PMCMCMFJ_00751 3.7e-148 Q Imidazolonepropionase and related amidohydrolases
PMCMCMFJ_00752 1.4e-245 3.5.1.47 S Peptidase dimerisation domain
PMCMCMFJ_00753 3e-137 S Protein of unknown function (DUF3100)
PMCMCMFJ_00754 5.7e-46 S An automated process has identified a potential problem with this gene model
PMCMCMFJ_00755 2.6e-51 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PMCMCMFJ_00756 2.2e-113 S SLAP domain
PMCMCMFJ_00757 1.4e-94
PMCMCMFJ_00758 3e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
PMCMCMFJ_00759 9e-98
PMCMCMFJ_00760 4.9e-108 K LysR substrate binding domain
PMCMCMFJ_00761 1e-20
PMCMCMFJ_00762 2.3e-215 S Sterol carrier protein domain
PMCMCMFJ_00763 9.2e-95 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PMCMCMFJ_00764 2e-105 argF 2.1.3.3, 2.7.2.2 E Belongs to the carbamate kinase family
PMCMCMFJ_00765 4.3e-66 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PMCMCMFJ_00766 8.8e-234 arcA 3.5.3.6 E Arginine
PMCMCMFJ_00767 1.2e-136 lysR5 K LysR substrate binding domain
PMCMCMFJ_00768 0.0 mgtA 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
PMCMCMFJ_00769 1e-48 S Metal binding domain of Ada
PMCMCMFJ_00770 2.5e-130 ybbM S Uncharacterised protein family (UPF0014)
PMCMCMFJ_00771 4.9e-111 ybbL S ABC transporter, ATP-binding protein
PMCMCMFJ_00772 0.0 S SH3-like domain
PMCMCMFJ_00773 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PMCMCMFJ_00774 2.1e-171 whiA K May be required for sporulation
PMCMCMFJ_00775 4e-195 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PMCMCMFJ_00776 6.2e-165 rapZ S Displays ATPase and GTPase activities
PMCMCMFJ_00777 4.1e-90 S Short repeat of unknown function (DUF308)
PMCMCMFJ_00778 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PMCMCMFJ_00779 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PMCMCMFJ_00780 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PMCMCMFJ_00781 3.9e-181 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PMCMCMFJ_00782 1.1e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PMCMCMFJ_00783 9.2e-158 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PMCMCMFJ_00784 5.8e-180 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PMCMCMFJ_00785 5.1e-17
PMCMCMFJ_00786 4.6e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PMCMCMFJ_00787 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PMCMCMFJ_00788 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PMCMCMFJ_00789 9.4e-132 comFC S Competence protein
PMCMCMFJ_00790 4.7e-246 comFA L Helicase C-terminal domain protein
PMCMCMFJ_00791 5.1e-119 yvyE 3.4.13.9 S YigZ family
PMCMCMFJ_00792 1.3e-210 tagO 2.7.8.33, 2.7.8.35 M transferase
PMCMCMFJ_00793 2.2e-219 rny S Endoribonuclease that initiates mRNA decay
PMCMCMFJ_00794 4.2e-195 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PMCMCMFJ_00795 1.1e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PMCMCMFJ_00796 2.1e-95 ymfM S Helix-turn-helix domain
PMCMCMFJ_00797 2.3e-133 IQ Enoyl-(Acyl carrier protein) reductase
PMCMCMFJ_00798 1.9e-236 S Peptidase M16
PMCMCMFJ_00799 9e-223 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
PMCMCMFJ_00800 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PMCMCMFJ_00801 1.7e-69 WQ51_03320 S Protein of unknown function (DUF1149)
PMCMCMFJ_00802 4.2e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PMCMCMFJ_00803 2.6e-214 yubA S AI-2E family transporter
PMCMCMFJ_00804 2.2e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PMCMCMFJ_00805 1.8e-200 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PMCMCMFJ_00806 8.4e-265 S Fibronectin type III domain
PMCMCMFJ_00807 4.5e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PMCMCMFJ_00809 4.6e-257 pepC 3.4.22.40 E aminopeptidase
PMCMCMFJ_00810 1.3e-122 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PMCMCMFJ_00811 5e-301 oppA E ABC transporter, substratebinding protein
PMCMCMFJ_00812 1.6e-310 oppA E ABC transporter, substratebinding protein
PMCMCMFJ_00813 7.1e-63 M LysM domain protein
PMCMCMFJ_00814 1.1e-86 C Aldo keto reductase
PMCMCMFJ_00815 4.8e-181 lacX 5.1.3.3 G Aldose 1-epimerase
PMCMCMFJ_00816 8.2e-236 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PMCMCMFJ_00817 1.9e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PMCMCMFJ_00818 6.5e-141 xerC D Phage integrase, N-terminal SAM-like domain
PMCMCMFJ_00819 1.4e-248 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PMCMCMFJ_00820 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PMCMCMFJ_00821 5.8e-152 dprA LU DNA protecting protein DprA
PMCMCMFJ_00822 4.6e-132 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PMCMCMFJ_00823 2.8e-154 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PMCMCMFJ_00824 1.9e-94 yjcE P Sodium proton antiporter
PMCMCMFJ_00825 1.5e-40 yjcE P Sodium proton antiporter
PMCMCMFJ_00826 1.1e-66 yjcE P NhaP-type Na H and K H
PMCMCMFJ_00827 7.1e-36 yozE S Belongs to the UPF0346 family
PMCMCMFJ_00828 2e-144 DegV S Uncharacterised protein, DegV family COG1307
PMCMCMFJ_00829 1.2e-107 hlyIII S protein, hemolysin III
PMCMCMFJ_00830 1.1e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PMCMCMFJ_00831 4.6e-160 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PMCMCMFJ_00832 9.5e-86 3.4.21.96 S SLAP domain
PMCMCMFJ_00833 8.4e-128 yagE E Amino acid permease
PMCMCMFJ_00834 9.7e-65 yagE E amino acid
PMCMCMFJ_00835 7.3e-126 S Alpha/beta hydrolase family
PMCMCMFJ_00836 3.7e-156 epsV 2.7.8.12 S glycosyl transferase family 2
PMCMCMFJ_00837 4.4e-140 ypuA S Protein of unknown function (DUF1002)
PMCMCMFJ_00838 3e-147 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PMCMCMFJ_00839 7.7e-182 S Alpha/beta hydrolase of unknown function (DUF915)
PMCMCMFJ_00840 1.2e-282 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PMCMCMFJ_00841 9.3e-86
PMCMCMFJ_00846 1.4e-51 dnaC L IstB-like ATP binding protein
PMCMCMFJ_00847 6.8e-33 S Conserved phage C-terminus (Phg_2220_C)
PMCMCMFJ_00848 1.2e-58 S Protein of unknown function (DUF1071)
PMCMCMFJ_00853 3.6e-09
PMCMCMFJ_00858 8e-97 S AntA/AntB antirepressor
PMCMCMFJ_00859 2.9e-12
PMCMCMFJ_00864 2.1e-76 S Phage antirepressor protein KilAC domain
PMCMCMFJ_00865 1.8e-10
PMCMCMFJ_00866 1.1e-12
PMCMCMFJ_00867 3.5e-15 ansR 3.4.21.88 K Cro/C1-type HTH DNA-binding domain
PMCMCMFJ_00868 1.2e-10 E Zn peptidase
PMCMCMFJ_00869 6e-14
PMCMCMFJ_00873 1.6e-20 S YjcQ protein
PMCMCMFJ_00874 4.2e-180 sip L Belongs to the 'phage' integrase family
PMCMCMFJ_00875 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PMCMCMFJ_00876 5.8e-203 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PMCMCMFJ_00877 0.0 dnaK O Heat shock 70 kDa protein
PMCMCMFJ_00878 8e-68 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PMCMCMFJ_00879 6.5e-193 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PMCMCMFJ_00880 3.2e-175 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PMCMCMFJ_00881 1.6e-155 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PMCMCMFJ_00882 1.1e-59 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PMCMCMFJ_00883 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PMCMCMFJ_00884 3.2e-47 rplGA J ribosomal protein
PMCMCMFJ_00885 8.8e-47 ylxR K Protein of unknown function (DUF448)
PMCMCMFJ_00886 1.4e-196 nusA K Participates in both transcription termination and antitermination
PMCMCMFJ_00887 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
PMCMCMFJ_00888 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PMCMCMFJ_00889 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PMCMCMFJ_00890 5.7e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PMCMCMFJ_00891 8.4e-140 cdsA 2.7.7.41 I Belongs to the CDS family
PMCMCMFJ_00892 5.4e-138 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PMCMCMFJ_00893 5.3e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PMCMCMFJ_00894 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PMCMCMFJ_00895 3.1e-184 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PMCMCMFJ_00896 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
PMCMCMFJ_00897 3e-195 yabB 2.1.1.223 L Methyltransferase small domain
PMCMCMFJ_00898 2.9e-116 plsC 2.3.1.51 I Acyltransferase
PMCMCMFJ_00899 4e-220 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PMCMCMFJ_00900 0.0 pepO 3.4.24.71 O Peptidase family M13
PMCMCMFJ_00901 0.0 mdlB V ABC transporter
PMCMCMFJ_00902 0.0 mdlA V ABC transporter
PMCMCMFJ_00903 5.5e-30 yneF S Uncharacterised protein family (UPF0154)
PMCMCMFJ_00904 3e-38 ynzC S UPF0291 protein
PMCMCMFJ_00905 2e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PMCMCMFJ_00906 1.4e-20 E GDSL-like Lipase/Acylhydrolase family
PMCMCMFJ_00907 7.7e-204 L Putative transposase DNA-binding domain
PMCMCMFJ_00908 9.5e-112 L Resolvase, N-terminal
PMCMCMFJ_00909 1.3e-114 E GDSL-like Lipase/Acylhydrolase family
PMCMCMFJ_00910 2.1e-120 ung2 3.2.2.27 L Uracil-DNA glycosylase
PMCMCMFJ_00911 6.7e-212 S SLAP domain
PMCMCMFJ_00912 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PMCMCMFJ_00913 1.4e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PMCMCMFJ_00914 1.7e-93 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PMCMCMFJ_00915 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PMCMCMFJ_00916 1.7e-228 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PMCMCMFJ_00917 6e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PMCMCMFJ_00918 4.1e-259 yfnA E amino acid
PMCMCMFJ_00919 2e-210 S Uncharacterized protein conserved in bacteria (DUF2325)
PMCMCMFJ_00920 8.6e-221 G Bacterial extracellular solute-binding protein
PMCMCMFJ_00921 1.3e-161 2.7.7.12 C Domain of unknown function (DUF4931)
PMCMCMFJ_00922 5.4e-167 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PMCMCMFJ_00923 3.4e-126 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PMCMCMFJ_00924 0.0 kup P Transport of potassium into the cell
PMCMCMFJ_00925 9.1e-175 rihB 3.2.2.1 F Nucleoside
PMCMCMFJ_00926 2.8e-134 ydhQ K UbiC transcription regulator-associated domain protein
PMCMCMFJ_00927 1e-153 S hydrolase
PMCMCMFJ_00928 2.5e-59 S Enterocin A Immunity
PMCMCMFJ_00929 3.1e-136 glcR K DeoR C terminal sensor domain
PMCMCMFJ_00930 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PMCMCMFJ_00931 2e-160 rssA S Phospholipase, patatin family
PMCMCMFJ_00932 5.4e-147 S hydrolase
PMCMCMFJ_00933 0.0 glvC 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
PMCMCMFJ_00934 4.1e-147 glvR K Helix-turn-helix domain, rpiR family
PMCMCMFJ_00935 1.6e-80
PMCMCMFJ_00936 2.9e-87 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PMCMCMFJ_00937 2.1e-39
PMCMCMFJ_00938 3.9e-119 C nitroreductase
PMCMCMFJ_00939 1.7e-249 yhdP S Transporter associated domain
PMCMCMFJ_00940 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PMCMCMFJ_00941 0.0 1.3.5.4 C FAD binding domain
PMCMCMFJ_00942 2e-39 S Transglycosylase associated protein
PMCMCMFJ_00943 1.5e-211 M Glycosyl hydrolases family 25
PMCMCMFJ_00944 8e-111 XK27_00160 S Domain of unknown function (DUF5052)
PMCMCMFJ_00945 4.1e-67
PMCMCMFJ_00946 5.4e-203 xerS L Belongs to the 'phage' integrase family
PMCMCMFJ_00947 1.5e-304 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PMCMCMFJ_00948 1.3e-159 degV S EDD domain protein, DegV family
PMCMCMFJ_00949 1.1e-66
PMCMCMFJ_00950 0.0 FbpA K Fibronectin-binding protein
PMCMCMFJ_00951 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
PMCMCMFJ_00952 1e-198 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PMCMCMFJ_00953 4.3e-169 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PMCMCMFJ_00954 1.4e-78 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PMCMCMFJ_00955 2.3e-285 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PMCMCMFJ_00956 5.5e-53
PMCMCMFJ_00958 2.7e-34 S YSIRK type signal peptide
PMCMCMFJ_00959 1.9e-110 F DNA/RNA non-specific endonuclease
PMCMCMFJ_00960 2e-75 S cog cog0433
PMCMCMFJ_00961 5.8e-85 2.3.1.128 K Acetyltransferase (GNAT) domain
PMCMCMFJ_00962 7.8e-157 S reductase
PMCMCMFJ_00963 2e-29
PMCMCMFJ_00964 2.9e-287 K Putative DNA-binding domain
PMCMCMFJ_00965 2.9e-238 pyrP F Permease
PMCMCMFJ_00966 4.7e-91 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PMCMCMFJ_00967 9.2e-262 emrY EGP Major facilitator Superfamily
PMCMCMFJ_00968 1.1e-217 mdtG EGP Major facilitator Superfamily
PMCMCMFJ_00969 6.9e-136
PMCMCMFJ_00970 1.9e-43
PMCMCMFJ_00971 1.7e-209 pepA E M42 glutamyl aminopeptidase
PMCMCMFJ_00972 2.2e-311 ybiT S ABC transporter, ATP-binding protein
PMCMCMFJ_00973 5.9e-174 S Aldo keto reductase
PMCMCMFJ_00974 0.0 V FtsX-like permease family
PMCMCMFJ_00975 4.1e-133 cysA V ABC transporter, ATP-binding protein
PMCMCMFJ_00976 3.4e-23
PMCMCMFJ_00978 2.5e-288 pipD E Dipeptidase
PMCMCMFJ_00979 7e-162 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PMCMCMFJ_00980 0.0 smc D Required for chromosome condensation and partitioning
PMCMCMFJ_00981 5.5e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PMCMCMFJ_00982 3e-307 oppA E ABC transporter substrate-binding protein
PMCMCMFJ_00983 2.4e-15 oppA E ABC transporter substrate-binding protein
PMCMCMFJ_00984 1.8e-116 oppA E ABC transporter substrate-binding protein
PMCMCMFJ_00985 7.4e-120 oppA E ABC transporter substrate-binding protein
PMCMCMFJ_00986 1.7e-128 oppC P Binding-protein-dependent transport system inner membrane component
PMCMCMFJ_00987 5.7e-172 oppB P ABC transporter permease
PMCMCMFJ_00988 1.9e-170 oppF P Belongs to the ABC transporter superfamily
PMCMCMFJ_00989 9.6e-194 oppD P Belongs to the ABC transporter superfamily
PMCMCMFJ_00990 9.8e-36 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PMCMCMFJ_00991 3.7e-182 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PMCMCMFJ_00992 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PMCMCMFJ_00993 2e-305 yloV S DAK2 domain fusion protein YloV
PMCMCMFJ_00994 4e-57 asp S Asp23 family, cell envelope-related function
PMCMCMFJ_00995 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PMCMCMFJ_00996 1.1e-30
PMCMCMFJ_00997 2.4e-124 thiN 2.7.6.2 H thiamine pyrophosphokinase
PMCMCMFJ_00998 1.7e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PMCMCMFJ_00999 4.1e-164 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PMCMCMFJ_01000 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
PMCMCMFJ_01001 1.3e-139 stp 3.1.3.16 T phosphatase
PMCMCMFJ_01002 1.6e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PMCMCMFJ_01003 1.6e-171 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PMCMCMFJ_01004 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PMCMCMFJ_01005 1.1e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PMCMCMFJ_01006 2.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PMCMCMFJ_01007 1.1e-77 6.3.3.2 S ASCH
PMCMCMFJ_01008 8.8e-293 recN L May be involved in recombinational repair of damaged DNA
PMCMCMFJ_01009 2.2e-148 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PMCMCMFJ_01010 2.4e-153 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PMCMCMFJ_01011 1.1e-34 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PMCMCMFJ_01012 7.6e-186 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PMCMCMFJ_01013 2.2e-143 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PMCMCMFJ_01014 2.1e-64 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PMCMCMFJ_01015 1.7e-70 yqhY S Asp23 family, cell envelope-related function
PMCMCMFJ_01016 4.9e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PMCMCMFJ_01017 1e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PMCMCMFJ_01018 7.8e-48 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PMCMCMFJ_01019 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
PMCMCMFJ_01020 3.7e-151 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PMCMCMFJ_01021 7.8e-255 S Uncharacterized protein conserved in bacteria (DUF2325)
PMCMCMFJ_01022 3.3e-303 L Transposase
PMCMCMFJ_01025 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PMCMCMFJ_01026 2.7e-300 S Predicted membrane protein (DUF2207)
PMCMCMFJ_01027 1.3e-157 cinI S Serine hydrolase (FSH1)
PMCMCMFJ_01028 1.7e-205 M Glycosyl hydrolases family 25
PMCMCMFJ_01030 2.9e-178 I Carboxylesterase family
PMCMCMFJ_01031 1.5e-64 arsC 1.20.4.1 P Belongs to the ArsC family
PMCMCMFJ_01032 4.1e-276 V ABC-type multidrug transport system, ATPase and permease components
PMCMCMFJ_01033 2e-291 V ABC-type multidrug transport system, ATPase and permease components
PMCMCMFJ_01034 4e-113 S haloacid dehalogenase-like hydrolase
PMCMCMFJ_01035 2.6e-52
PMCMCMFJ_01036 1.9e-37
PMCMCMFJ_01037 2.3e-65 S Alpha beta hydrolase
PMCMCMFJ_01038 1.1e-36 S Alpha beta hydrolase
PMCMCMFJ_01039 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PMCMCMFJ_01040 2.8e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PMCMCMFJ_01041 1.3e-141 yfeO P Voltage gated chloride channel
PMCMCMFJ_01042 1.4e-184 5.3.3.2 C FMN-dependent dehydrogenase
PMCMCMFJ_01043 1.4e-51
PMCMCMFJ_01044 2.1e-42
PMCMCMFJ_01045 6.4e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PMCMCMFJ_01046 9.5e-297 ybeC E amino acid
PMCMCMFJ_01047 2.6e-157 S Sucrose-6F-phosphate phosphohydrolase
PMCMCMFJ_01048 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
PMCMCMFJ_01049 2.5e-39 rpmE2 J Ribosomal protein L31
PMCMCMFJ_01050 1.3e-262 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PMCMCMFJ_01051 4.8e-250 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PMCMCMFJ_01052 1.7e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PMCMCMFJ_01053 1e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PMCMCMFJ_01054 3.4e-129 S (CBS) domain
PMCMCMFJ_01055 1.5e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PMCMCMFJ_01056 5.1e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PMCMCMFJ_01057 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PMCMCMFJ_01058 1.6e-33 yabO J S4 domain protein
PMCMCMFJ_01059 6.8e-60 divIC D Septum formation initiator
PMCMCMFJ_01060 1.8e-62 yabR J S1 RNA binding domain
PMCMCMFJ_01061 1.5e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PMCMCMFJ_01062 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PMCMCMFJ_01063 9.7e-166 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PMCMCMFJ_01064 2e-194 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PMCMCMFJ_01065 1.7e-298 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PMCMCMFJ_01066 3.1e-48 S Domain of unknown function (DUF4811)
PMCMCMFJ_01067 1.4e-262 lmrB EGP Major facilitator Superfamily
PMCMCMFJ_01068 4.2e-77 K MerR HTH family regulatory protein
PMCMCMFJ_01069 3.1e-139 S Cysteine-rich secretory protein family
PMCMCMFJ_01070 1e-273 ycaM E amino acid
PMCMCMFJ_01071 2.8e-290
PMCMCMFJ_01073 3.3e-189 cggR K Putative sugar-binding domain
PMCMCMFJ_01074 6.5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PMCMCMFJ_01075 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PMCMCMFJ_01076 1.7e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PMCMCMFJ_01077 2.9e-277 V ABC transporter transmembrane region
PMCMCMFJ_01078 3.6e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
PMCMCMFJ_01079 3.1e-130 T Transcriptional regulatory protein, C terminal
PMCMCMFJ_01080 5.2e-187 T GHKL domain
PMCMCMFJ_01081 5.8e-76 S Peptidase propeptide and YPEB domain
PMCMCMFJ_01082 2.5e-72 S Peptidase propeptide and YPEB domain
PMCMCMFJ_01083 4.7e-83 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
PMCMCMFJ_01084 3.8e-65 yybA 2.3.1.57 K Transcriptional regulator
PMCMCMFJ_01085 7e-68 V ABC transporter transmembrane region
PMCMCMFJ_01086 9e-161 V ABC transporter transmembrane region
PMCMCMFJ_01087 3.1e-87 gtcA S Teichoic acid glycosylation protein
PMCMCMFJ_01088 4.1e-80 fld C Flavodoxin
PMCMCMFJ_01089 6.5e-164 map 3.4.11.18 E Methionine Aminopeptidase
PMCMCMFJ_01090 8e-163 yihY S Belongs to the UPF0761 family
PMCMCMFJ_01091 7.3e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PMCMCMFJ_01092 5.6e-214 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
PMCMCMFJ_01093 5.9e-214 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
PMCMCMFJ_01094 1.2e-216 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PMCMCMFJ_01095 1e-44
PMCMCMFJ_01096 2.9e-27 D Alpha beta
PMCMCMFJ_01097 2.2e-119 D Alpha beta
PMCMCMFJ_01098 1.2e-263 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PMCMCMFJ_01099 3e-145 recX 2.4.1.337 GT4 S Regulatory protein RecX
PMCMCMFJ_01100 7.8e-85
PMCMCMFJ_01101 1.6e-74
PMCMCMFJ_01102 1.2e-141 hlyX S Transporter associated domain
PMCMCMFJ_01103 2.1e-304 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PMCMCMFJ_01104 8.7e-44 XK27_09445 S Domain of unknown function (DUF1827)
PMCMCMFJ_01105 0.0 clpE O Belongs to the ClpA ClpB family
PMCMCMFJ_01106 8.5e-41 ptsH G phosphocarrier protein HPR
PMCMCMFJ_01107 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PMCMCMFJ_01108 3.9e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PMCMCMFJ_01109 8.5e-139 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PMCMCMFJ_01110 3.3e-122 coiA 3.6.4.12 S Competence protein
PMCMCMFJ_01111 4e-13 coiA 3.6.4.12 S Competence protein
PMCMCMFJ_01112 4.6e-114 yjbH Q Thioredoxin
PMCMCMFJ_01113 5.2e-110 yjbK S CYTH
PMCMCMFJ_01114 1.2e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
PMCMCMFJ_01115 3.8e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PMCMCMFJ_01116 6.4e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PMCMCMFJ_01117 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
PMCMCMFJ_01118 4.2e-92 S SNARE associated Golgi protein
PMCMCMFJ_01119 1.1e-84 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PMCMCMFJ_01120 2.5e-175 prmA J Ribosomal protein L11 methyltransferase
PMCMCMFJ_01121 4.2e-36
PMCMCMFJ_01122 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PMCMCMFJ_01123 6e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PMCMCMFJ_01124 9.8e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
PMCMCMFJ_01125 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PMCMCMFJ_01126 9.8e-222 patA 2.6.1.1 E Aminotransferase
PMCMCMFJ_01128 1e-215 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PMCMCMFJ_01129 4.8e-34 S reductase
PMCMCMFJ_01130 4.4e-39 S reductase
PMCMCMFJ_01131 2.7e-32 S reductase
PMCMCMFJ_01132 8.4e-148 yxeH S hydrolase
PMCMCMFJ_01133 6.8e-181 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMCMCMFJ_01134 1.1e-243 yfnA E Amino Acid
PMCMCMFJ_01135 6.8e-110 dedA 3.1.3.1 S SNARE associated Golgi protein
PMCMCMFJ_01136 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PMCMCMFJ_01137 1.7e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PMCMCMFJ_01138 7.7e-293 I Acyltransferase
PMCMCMFJ_01139 5.4e-175 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PMCMCMFJ_01140 1.9e-141 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PMCMCMFJ_01141 1.5e-34 yrvD S Lipopolysaccharide assembly protein A domain
PMCMCMFJ_01142 1.3e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PMCMCMFJ_01143 1.8e-130 sip L Belongs to the 'phage' integrase family
PMCMCMFJ_01146 8.5e-24 S Hypothetical protein (DUF2513)
PMCMCMFJ_01147 7.4e-20 S Pfam:Peptidase_M78
PMCMCMFJ_01148 7.1e-19 ps115 K sequence-specific DNA binding
PMCMCMFJ_01151 1.4e-16
PMCMCMFJ_01152 3.6e-73 ps308 K AntA/AntB antirepressor
PMCMCMFJ_01153 9.5e-14
PMCMCMFJ_01159 5e-30 S HNH endonuclease
PMCMCMFJ_01160 6.1e-70 S AAA domain
PMCMCMFJ_01162 2.6e-154 res L Helicase C-terminal domain protein
PMCMCMFJ_01164 7.9e-41 S Protein of unknown function (DUF669)
PMCMCMFJ_01165 6.9e-272 S Phage plasmid primase, P4
PMCMCMFJ_01177 3.3e-37 S VRR_NUC
PMCMCMFJ_01179 7.7e-18
PMCMCMFJ_01180 2.5e-48 S HNH endonuclease
PMCMCMFJ_01181 4.2e-56 S Phage terminase, small subunit
PMCMCMFJ_01183 1.7e-212 S Phage Terminase
PMCMCMFJ_01185 2.2e-133 S Phage portal protein
PMCMCMFJ_01186 1.9e-87 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
PMCMCMFJ_01187 1.6e-52 S peptidase activity
PMCMCMFJ_01188 5.5e-19 S Phage gp6-like head-tail connector protein
PMCMCMFJ_01190 2.8e-12 S Bacteriophage HK97-gp10, putative tail-component
PMCMCMFJ_01192 1.2e-12 S Pfam:Phage_TTP_1
PMCMCMFJ_01195 8.2e-129 M Phage tail tape measure protein TP901
PMCMCMFJ_01196 1.7e-33 S phage tail
PMCMCMFJ_01197 6e-136 S Phage minor structural protein
PMCMCMFJ_01198 1.9e-138 2.4.2.3 F Phosphorylase superfamily
PMCMCMFJ_01199 9e-144 2.4.2.3 F Phosphorylase superfamily
PMCMCMFJ_01200 1.4e-150 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
PMCMCMFJ_01201 1.5e-155 arbx M Glycosyl transferase family 8
PMCMCMFJ_01202 1.6e-148 arbV 2.3.1.51 I Acyl-transferase
PMCMCMFJ_01204 4.9e-34
PMCMCMFJ_01206 4.8e-131 K response regulator
PMCMCMFJ_01207 2.2e-305 vicK 2.7.13.3 T Histidine kinase
PMCMCMFJ_01208 2.1e-257 yycH S YycH protein
PMCMCMFJ_01209 3.4e-149 yycI S YycH protein
PMCMCMFJ_01210 4.1e-147 vicX 3.1.26.11 S domain protein
PMCMCMFJ_01211 1.6e-161 htrA 3.4.21.107 O serine protease
PMCMCMFJ_01212 1e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PMCMCMFJ_01213 2.9e-247 mntH P H( )-stimulated, divalent metal cation uptake system
PMCMCMFJ_01214 2.4e-45 yitW S Iron-sulfur cluster assembly protein
PMCMCMFJ_01215 2e-266 sufB O assembly protein SufB
PMCMCMFJ_01216 2.4e-59 nifU C SUF system FeS assembly protein, NifU family
PMCMCMFJ_01217 5.3e-178 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PMCMCMFJ_01218 3.5e-174 sufD O FeS assembly protein SufD
PMCMCMFJ_01219 2.8e-140 sufC O FeS assembly ATPase SufC
PMCMCMFJ_01220 5e-125 C 2Fe-2S iron-sulfur cluster binding domain
PMCMCMFJ_01221 2e-155 crtI 1.3.99.23, 5.2.1.13 Q HI0933-like protein
PMCMCMFJ_01222 7.4e-52 K helix_turn_helix gluconate operon transcriptional repressor
PMCMCMFJ_01223 7.2e-183 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PMCMCMFJ_01224 6.5e-169 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PMCMCMFJ_01225 2.8e-48 S Peptidase propeptide and YPEB domain
PMCMCMFJ_01226 8.3e-138 L An automated process has identified a potential problem with this gene model
PMCMCMFJ_01228 3.2e-139 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PMCMCMFJ_01229 8.7e-86 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
PMCMCMFJ_01230 2.2e-226 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PMCMCMFJ_01231 2.8e-79 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PMCMCMFJ_01232 4e-89 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PMCMCMFJ_01233 2.4e-10 L Psort location Cytoplasmic, score
PMCMCMFJ_01234 1.3e-84 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PMCMCMFJ_01235 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PMCMCMFJ_01236 5.7e-106 2.4.1.58 GT8 M family 8
PMCMCMFJ_01237 1.2e-35 M lipopolysaccharide 3-alpha-galactosyltransferase activity
PMCMCMFJ_01238 2.8e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PMCMCMFJ_01239 2.4e-107 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PMCMCMFJ_01240 1.1e-34 S Protein of unknown function (DUF2508)
PMCMCMFJ_01241 7.6e-112 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PMCMCMFJ_01242 2.2e-51 yaaQ S Cyclic-di-AMP receptor
PMCMCMFJ_01243 3.7e-154 holB 2.7.7.7 L DNA polymerase III
PMCMCMFJ_01244 1.8e-59 yabA L Involved in initiation control of chromosome replication
PMCMCMFJ_01245 1.5e-155 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PMCMCMFJ_01246 2.1e-129 fat 3.1.2.21 I Acyl-ACP thioesterase
PMCMCMFJ_01247 2.2e-85 S ECF transporter, substrate-specific component
PMCMCMFJ_01248 8.2e-134 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PMCMCMFJ_01249 4.8e-96 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PMCMCMFJ_01250 1.5e-194 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PMCMCMFJ_01251 1.3e-51 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PMCMCMFJ_01252 3.2e-170 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PMCMCMFJ_01253 5.3e-285 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
PMCMCMFJ_01254 0.0 uup S ABC transporter, ATP-binding protein
PMCMCMFJ_01255 5.8e-112 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PMCMCMFJ_01256 8.4e-148 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PMCMCMFJ_01257 2.9e-121 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PMCMCMFJ_01258 3e-139 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PMCMCMFJ_01259 1.2e-161 phnD P Phosphonate ABC transporter
PMCMCMFJ_01261 8.8e-84 uspA T universal stress protein
PMCMCMFJ_01262 9.8e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
PMCMCMFJ_01263 1.7e-87 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PMCMCMFJ_01264 3.6e-90 ntd 2.4.2.6 F Nucleoside
PMCMCMFJ_01265 5.2e-08
PMCMCMFJ_01266 5.4e-13
PMCMCMFJ_01267 3e-215 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PMCMCMFJ_01268 0.0 G Belongs to the glycosyl hydrolase 31 family
PMCMCMFJ_01269 5e-47 2.4.1.33 V HlyD family secretion protein
PMCMCMFJ_01273 3e-134 S CAAX amino terminal protease
PMCMCMFJ_01274 7.4e-40 S Enterocin A Immunity
PMCMCMFJ_01275 0.0 pepF E oligoendopeptidase F
PMCMCMFJ_01276 2.2e-208 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PMCMCMFJ_01277 6.5e-125 S Protein of unknown function (DUF554)
PMCMCMFJ_01278 8.2e-61
PMCMCMFJ_01279 5.6e-19
PMCMCMFJ_01280 1.2e-97 rimL J Acetyltransferase (GNAT) domain
PMCMCMFJ_01281 8.3e-58
PMCMCMFJ_01282 8.9e-292 S ABC transporter
PMCMCMFJ_01283 2.4e-136 thrE S Putative threonine/serine exporter
PMCMCMFJ_01284 1.1e-83 S Threonine/Serine exporter, ThrE
PMCMCMFJ_01285 9.1e-112 yvpB S Peptidase_C39 like family
PMCMCMFJ_01286 2.5e-68
PMCMCMFJ_01287 9.9e-177 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PMCMCMFJ_01288 5.5e-77 nrdI F NrdI Flavodoxin like
PMCMCMFJ_01289 2.3e-223 tnpB L Putative transposase DNA-binding domain
PMCMCMFJ_01290 3.3e-112
PMCMCMFJ_01291 6.5e-279 S O-antigen ligase like membrane protein
PMCMCMFJ_01292 3.9e-42
PMCMCMFJ_01293 7.7e-89 gmk2 2.7.4.8 F Guanylate kinase homologues.
PMCMCMFJ_01294 2e-89 M NlpC/P60 family
PMCMCMFJ_01295 1.4e-136 M NlpC P60 family protein
PMCMCMFJ_01296 2.6e-118 M NlpC/P60 family
PMCMCMFJ_01297 3.5e-41
PMCMCMFJ_01298 3.5e-175 S Cysteine-rich secretory protein family
PMCMCMFJ_01299 1.5e-215 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PMCMCMFJ_01301 1.7e-29 S Predicted membrane protein (DUF2335)
PMCMCMFJ_01303 0.0 mngB 3.2.1.170, 3.2.1.24 GH38 G Glycosyl hydrolases family 38 N-terminal domain
PMCMCMFJ_01304 6.2e-36 licR 2.7.1.200, 2.7.1.202 G Mga helix-turn-helix domain
PMCMCMFJ_01305 1.1e-130 M Glycosyl hydrolases family 25
PMCMCMFJ_01306 2.8e-211 yfmL 3.6.4.13 L DEAD DEAH box helicase
PMCMCMFJ_01307 1.8e-248 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMCMCMFJ_01309 5.9e-216 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PMCMCMFJ_01310 2.3e-43 ybhL S Belongs to the BI1 family
PMCMCMFJ_01311 1.2e-210 S Bacterial protein of unknown function (DUF871)
PMCMCMFJ_01312 4.7e-97 yceD S Uncharacterized ACR, COG1399
PMCMCMFJ_01313 4.6e-216 ylbM S Belongs to the UPF0348 family
PMCMCMFJ_01314 5.3e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PMCMCMFJ_01315 4.3e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PMCMCMFJ_01316 4.4e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PMCMCMFJ_01317 4.4e-200 yqeH S Ribosome biogenesis GTPase YqeH
PMCMCMFJ_01318 4.2e-84 yqeG S HAD phosphatase, family IIIA
PMCMCMFJ_01319 8.6e-199 tnpB L Putative transposase DNA-binding domain
PMCMCMFJ_01320 1.1e-152 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PMCMCMFJ_01321 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PMCMCMFJ_01322 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PMCMCMFJ_01323 3.2e-72 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PMCMCMFJ_01324 4e-98 rihB 3.2.2.1 F Nucleoside
PMCMCMFJ_01325 1.8e-79 potB E Binding-protein-dependent transport system inner membrane component
PMCMCMFJ_01326 4.7e-72 S SLAP domain
PMCMCMFJ_01327 6.7e-19 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PMCMCMFJ_01328 4.3e-145 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PMCMCMFJ_01329 1.1e-25
PMCMCMFJ_01330 1.2e-77 K DNA-templated transcription, initiation
PMCMCMFJ_01331 5.3e-41
PMCMCMFJ_01333 7.1e-124 S SLAP domain
PMCMCMFJ_01334 8.8e-58 S Peptidase propeptide and YPEB domain
PMCMCMFJ_01335 1.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PMCMCMFJ_01336 7.4e-169 coaA 2.7.1.33 F Pantothenic acid kinase
PMCMCMFJ_01337 7.9e-97 E GDSL-like Lipase/Acylhydrolase
PMCMCMFJ_01338 7.5e-74 yjcF S Acetyltransferase (GNAT) domain
PMCMCMFJ_01339 1.6e-143 aatB ET ABC transporter substrate-binding protein
PMCMCMFJ_01340 1e-105 glnQ 3.6.3.21 E ABC transporter
PMCMCMFJ_01341 1.5e-107 glnP P ABC transporter permease
PMCMCMFJ_01342 0.0 helD 3.6.4.12 L DNA helicase
PMCMCMFJ_01343 2.3e-116 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
PMCMCMFJ_01344 1.4e-126 pgm3 G Phosphoglycerate mutase family
PMCMCMFJ_01345 1.2e-241 S response to antibiotic
PMCMCMFJ_01346 3.2e-124
PMCMCMFJ_01347 0.0 3.6.3.8 P P-type ATPase
PMCMCMFJ_01348 4.3e-65 2.7.1.191 G PTS system fructose IIA component
PMCMCMFJ_01349 1.3e-42
PMCMCMFJ_01350 5.9e-09
PMCMCMFJ_01351 6.5e-85 L Transposase
PMCMCMFJ_01352 1.1e-08 S CAAX amino terminal protease
PMCMCMFJ_01353 6.1e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PMCMCMFJ_01354 5.4e-214 2.1.1.14 E methionine synthase, vitamin-B12 independent
PMCMCMFJ_01355 1.2e-11
PMCMCMFJ_01356 2e-25 K Helix-turn-helix XRE-family like proteins
PMCMCMFJ_01359 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PMCMCMFJ_01360 3.5e-32 ykzG S Belongs to the UPF0356 family
PMCMCMFJ_01361 8.9e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PMCMCMFJ_01362 0.0 typA T GTP-binding protein TypA
PMCMCMFJ_01363 5.9e-211 ftsW D Belongs to the SEDS family
PMCMCMFJ_01364 5.1e-54 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
PMCMCMFJ_01365 4.5e-97 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PMCMCMFJ_01366 1.1e-81 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PMCMCMFJ_01367 6.9e-187 ylbL T Belongs to the peptidase S16 family
PMCMCMFJ_01368 3.1e-79 comEA L Competence protein ComEA
PMCMCMFJ_01369 0.0 comEC S Competence protein ComEC
PMCMCMFJ_01370 2.6e-175 holA 2.7.7.7 L DNA polymerase III delta subunit
PMCMCMFJ_01371 6.7e-35 rpsT J Binds directly to 16S ribosomal RNA
PMCMCMFJ_01372 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PMCMCMFJ_01373 3e-310 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PMCMCMFJ_01374 1.3e-148
PMCMCMFJ_01375 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PMCMCMFJ_01376 4e-216 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PMCMCMFJ_01377 2e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PMCMCMFJ_01378 1.4e-104 engB D Necessary for normal cell division and for the maintenance of normal septation
PMCMCMFJ_01379 7.8e-39 yjeM E Amino Acid
PMCMCMFJ_01380 3.4e-175 yjeM E Amino Acid
PMCMCMFJ_01381 2.3e-192 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PMCMCMFJ_01382 1.3e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
PMCMCMFJ_01383 1.3e-246 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PMCMCMFJ_01384 2.8e-75 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PMCMCMFJ_01385 5.2e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PMCMCMFJ_01386 9.8e-177 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PMCMCMFJ_01387 7e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PMCMCMFJ_01388 2.3e-215 aspC 2.6.1.1 E Aminotransferase
PMCMCMFJ_01389 2.3e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PMCMCMFJ_01390 4.7e-194 pbpX1 V Beta-lactamase
PMCMCMFJ_01391 4.6e-299 I Protein of unknown function (DUF2974)
PMCMCMFJ_01392 1.8e-38 C FMN_bind
PMCMCMFJ_01393 3.9e-82
PMCMCMFJ_01394 1.8e-175 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
PMCMCMFJ_01395 6.4e-90 alkD L DNA alkylation repair enzyme
PMCMCMFJ_01396 6.8e-294 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PMCMCMFJ_01397 1.1e-127 K UTRA domain
PMCMCMFJ_01398 1.6e-55 celA1 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PMCMCMFJ_01399 4.3e-59 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
PMCMCMFJ_01400 3.2e-11
PMCMCMFJ_01401 1.1e-183 scrR K helix_turn _helix lactose operon repressor
PMCMCMFJ_01402 3.7e-295 scrB 3.2.1.26 GH32 G invertase
PMCMCMFJ_01403 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
PMCMCMFJ_01404 2.3e-181 M CHAP domain
PMCMCMFJ_01405 3.5e-75
PMCMCMFJ_01406 1.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PMCMCMFJ_01407 2.6e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PMCMCMFJ_01408 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PMCMCMFJ_01409 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PMCMCMFJ_01410 1.7e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PMCMCMFJ_01411 1.5e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PMCMCMFJ_01412 9.6e-41 yajC U Preprotein translocase
PMCMCMFJ_01413 9.6e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PMCMCMFJ_01414 1.6e-210 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PMCMCMFJ_01415 1.4e-181 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PMCMCMFJ_01416 4.7e-228 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PMCMCMFJ_01417 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PMCMCMFJ_01418 2e-42 yrzL S Belongs to the UPF0297 family
PMCMCMFJ_01419 6.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PMCMCMFJ_01420 1.1e-50 yrzB S Belongs to the UPF0473 family
PMCMCMFJ_01421 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PMCMCMFJ_01422 3.5e-54 trxA O Belongs to the thioredoxin family
PMCMCMFJ_01423 9.7e-59 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PMCMCMFJ_01424 5.7e-18
PMCMCMFJ_01425 1.5e-239 G Bacterial extracellular solute-binding protein
PMCMCMFJ_01426 1e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
PMCMCMFJ_01427 1.1e-236 XK27_01810 S Calcineurin-like phosphoesterase
PMCMCMFJ_01429 0.0 S SLAP domain
PMCMCMFJ_01430 0.0 hsdR 3.1.21.3 L DEAD/DEAH box helicase
PMCMCMFJ_01431 1.2e-164 S AAA domain, putative AbiEii toxin, Type IV TA system
PMCMCMFJ_01432 3.4e-42 S RloB-like protein
PMCMCMFJ_01433 1.9e-259 hsdM 2.1.1.72 V type I restriction-modification system
PMCMCMFJ_01434 1.7e-98 3.1.21.3 V Type I restriction modification DNA specificity domain
PMCMCMFJ_01435 1.2e-63 S SIR2-like domain
PMCMCMFJ_01436 3.2e-10 S Domain of unknown function DUF87
PMCMCMFJ_01437 1.2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PMCMCMFJ_01438 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PMCMCMFJ_01439 1.5e-102 srtA 3.4.22.70 M sortase family
PMCMCMFJ_01441 2.9e-46 V Transport permease protein
PMCMCMFJ_01442 2.5e-62 yfiL V ABC transporter
PMCMCMFJ_01444 9.5e-220 L Belongs to the 'phage' integrase family
PMCMCMFJ_01445 2.3e-26
PMCMCMFJ_01446 3.9e-55
PMCMCMFJ_01447 5.1e-145 S Replication initiation factor
PMCMCMFJ_01448 3.3e-141 D Ftsk spoiiie family protein
PMCMCMFJ_01449 3.3e-87
PMCMCMFJ_01450 7.4e-74
PMCMCMFJ_01451 3.9e-131 K Helix-turn-helix XRE-family like proteins
PMCMCMFJ_01453 9.2e-119 yhiD S MgtC family
PMCMCMFJ_01454 1.6e-227 I Protein of unknown function (DUF2974)
PMCMCMFJ_01455 1.4e-16
PMCMCMFJ_01457 6.7e-167 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PMCMCMFJ_01458 2.5e-135 V ABC transporter transmembrane region
PMCMCMFJ_01459 5.2e-170 degV S DegV family
PMCMCMFJ_01460 2.3e-165 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
PMCMCMFJ_01461 6.7e-254 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PMCMCMFJ_01462 5.7e-69 rplI J Binds to the 23S rRNA
PMCMCMFJ_01463 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PMCMCMFJ_01464 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PMCMCMFJ_01465 2.7e-75 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PMCMCMFJ_01466 1.6e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
PMCMCMFJ_01467 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PMCMCMFJ_01468 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PMCMCMFJ_01469 1.1e-209 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PMCMCMFJ_01470 2.6e-35 yaaA S S4 domain protein YaaA
PMCMCMFJ_01471 1.5e-124 S PAS domain
PMCMCMFJ_01472 1.6e-11
PMCMCMFJ_01473 2.7e-57
PMCMCMFJ_01474 6.6e-56
PMCMCMFJ_01475 4e-08
PMCMCMFJ_01476 1.9e-237 brnQ U Component of the transport system for branched-chain amino acids
PMCMCMFJ_01477 2.8e-24 S Alpha beta hydrolase
PMCMCMFJ_01478 2.4e-273 lsa S ABC transporter
PMCMCMFJ_01479 3.5e-107 S Protein of unknown function (DUF1211)
PMCMCMFJ_01480 3.4e-27
PMCMCMFJ_01481 8e-22 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
PMCMCMFJ_01482 5.4e-53 hipB K sequence-specific DNA binding
PMCMCMFJ_01483 4.8e-42 S SnoaL-like domain
PMCMCMFJ_01484 0.0 L PLD-like domain
PMCMCMFJ_01485 9.6e-103 pgm3 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
PMCMCMFJ_01486 8.8e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
PMCMCMFJ_01487 2.6e-280 thrC 4.2.3.1 E Threonine synthase
PMCMCMFJ_01488 6.6e-221 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
PMCMCMFJ_01489 2.8e-157 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PMCMCMFJ_01490 2.5e-118
PMCMCMFJ_01491 4.6e-160 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PMCMCMFJ_01493 2.3e-08 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PMCMCMFJ_01494 3.1e-122 L Belongs to the 'phage' integrase family
PMCMCMFJ_01495 1.6e-180 V Abi-like protein
PMCMCMFJ_01498 2.5e-30 S Hypothetical protein (DUF2513)
PMCMCMFJ_01499 6.2e-74 3.4.21.88 K Peptidase S24-like
PMCMCMFJ_01500 2.3e-10 K Helix-turn-helix XRE-family like proteins
PMCMCMFJ_01508 1.1e-20 L Psort location Cytoplasmic, score
PMCMCMFJ_01511 1.3e-09
PMCMCMFJ_01512 1.1e-24 S HNH endonuclease
PMCMCMFJ_01517 1e-83 ps308 K AntA/AntB antirepressor
PMCMCMFJ_01523 1.1e-08
PMCMCMFJ_01524 7.8e-62 L HNH nucleases
PMCMCMFJ_01525 9.3e-56 L Phage terminase, small subunit
PMCMCMFJ_01528 1.8e-217 S Phage Terminase
PMCMCMFJ_01530 2.7e-16 S Phage portal protein
PMCMCMFJ_01534 2.2e-129 blpT
PMCMCMFJ_01535 1.4e-107 M Transport protein ComB
PMCMCMFJ_01536 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PMCMCMFJ_01537 1.5e-128 K LytTr DNA-binding domain
PMCMCMFJ_01538 4.4e-138 2.7.13.3 T GHKL domain
PMCMCMFJ_01539 1.2e-16
PMCMCMFJ_01540 2.1e-255 S Archaea bacterial proteins of unknown function
PMCMCMFJ_01541 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PMCMCMFJ_01542 3e-270 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
PMCMCMFJ_01543 1e-24
PMCMCMFJ_01544 9.5e-26
PMCMCMFJ_01545 2.5e-33
PMCMCMFJ_01546 1.4e-53 S Enterocin A Immunity
PMCMCMFJ_01547 8e-145 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PMCMCMFJ_01548 5.5e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PMCMCMFJ_01549 6.6e-207 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
PMCMCMFJ_01550 9.6e-121 K response regulator
PMCMCMFJ_01551 0.0 V ABC transporter
PMCMCMFJ_01552 4.2e-144 V ABC transporter, ATP-binding protein
PMCMCMFJ_01553 1.2e-145 V ABC transporter, ATP-binding protein
PMCMCMFJ_01554 3.8e-137 XK27_01040 S Protein of unknown function (DUF1129)
PMCMCMFJ_01555 3.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PMCMCMFJ_01556 2.8e-44 yyzM S Bacterial protein of unknown function (DUF951)
PMCMCMFJ_01557 1.5e-153 spo0J K Belongs to the ParB family
PMCMCMFJ_01558 3.4e-138 soj D Sporulation initiation inhibitor
PMCMCMFJ_01559 5e-148 noc K Belongs to the ParB family
PMCMCMFJ_01560 1.2e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PMCMCMFJ_01561 3e-53 cvpA S Colicin V production protein
PMCMCMFJ_01563 2.5e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PMCMCMFJ_01564 6e-151 3.1.3.48 T Tyrosine phosphatase family
PMCMCMFJ_01565 2e-97 azr 1.5.1.36 S NADPH-dependent FMN reductase
PMCMCMFJ_01566 6.4e-96 nqr 1.5.1.36 S NADPH-dependent FMN reductase
PMCMCMFJ_01567 3.7e-111 K WHG domain
PMCMCMFJ_01568 8e-38
PMCMCMFJ_01569 2.5e-186 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PMCMCMFJ_01570 1.7e-129 manY G PTS system
PMCMCMFJ_01571 1e-173 manN G system, mannose fructose sorbose family IID component
PMCMCMFJ_01572 1.1e-62 manO S Domain of unknown function (DUF956)
PMCMCMFJ_01573 3.3e-158 K Transcriptional regulator
PMCMCMFJ_01574 1.3e-85 maa S transferase hexapeptide repeat
PMCMCMFJ_01575 1.7e-241 cycA E Amino acid permease
PMCMCMFJ_01576 8e-282 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PMCMCMFJ_01577 6.8e-184 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PMCMCMFJ_01578 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PMCMCMFJ_01579 0.0 mtlR K Mga helix-turn-helix domain
PMCMCMFJ_01580 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
PMCMCMFJ_01581 2.1e-79 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMCMCMFJ_01582 1e-218 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
PMCMCMFJ_01583 3.2e-28 4.1.1.44 S Carboxymuconolactone decarboxylase family
PMCMCMFJ_01584 1.4e-78 4.1.1.44 S Carboxymuconolactone decarboxylase family
PMCMCMFJ_01585 2.1e-32
PMCMCMFJ_01586 3.7e-59 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
PMCMCMFJ_01587 2.3e-156 K Helix-turn-helix XRE-family like proteins
PMCMCMFJ_01588 3.9e-298 V ABC transporter transmembrane region
PMCMCMFJ_01589 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
PMCMCMFJ_01590 0.0 S TerB-C domain
PMCMCMFJ_01591 3.5e-244 P P-loop Domain of unknown function (DUF2791)
PMCMCMFJ_01592 0.0 lhr L DEAD DEAH box helicase
PMCMCMFJ_01593 1.4e-60
PMCMCMFJ_01594 4.3e-228 amtB P ammonium transporter
PMCMCMFJ_01595 2.9e-85 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PMCMCMFJ_01596 1.2e-42 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PMCMCMFJ_01598 6.2e-59 psiE S Phosphate-starvation-inducible E
PMCMCMFJ_01599 6.5e-113 yncA 2.3.1.79 S Maltose acetyltransferase
PMCMCMFJ_01600 2.9e-69 S Iron-sulphur cluster biosynthesis
PMCMCMFJ_01602 2.3e-30
PMCMCMFJ_01603 1.2e-171 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
PMCMCMFJ_01604 6.2e-12
PMCMCMFJ_01605 1.8e-125 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMCMCMFJ_01606 2.8e-86 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMCMCMFJ_01607 1.4e-98 L Helix-turn-helix domain
PMCMCMFJ_01608 5.3e-139 L hmm pf00665
PMCMCMFJ_01609 9.3e-136 UW LPXTG-motif cell wall anchor domain protein
PMCMCMFJ_01610 9.3e-196 UW LPXTG-motif cell wall anchor domain protein
PMCMCMFJ_01611 9.6e-45 UW LPXTG-motif cell wall anchor domain protein
PMCMCMFJ_01612 1.1e-19 UW LPXTG-motif cell wall anchor domain protein
PMCMCMFJ_01613 1.8e-237 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PMCMCMFJ_01614 1.7e-99 J Acetyltransferase (GNAT) domain
PMCMCMFJ_01615 1.4e-110 yjbF S SNARE associated Golgi protein
PMCMCMFJ_01616 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PMCMCMFJ_01617 5.1e-245 ynbB 4.4.1.1 P aluminum resistance
PMCMCMFJ_01618 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PMCMCMFJ_01619 3.2e-283 E Amino acid permease
PMCMCMFJ_01620 1.6e-93 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
PMCMCMFJ_01621 1.2e-271 pepV 3.5.1.18 E dipeptidase PepV
PMCMCMFJ_01622 1.4e-115 mmuP E amino acid
PMCMCMFJ_01623 5e-13 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PMCMCMFJ_01624 1e-63 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PMCMCMFJ_01625 3e-66 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PMCMCMFJ_01626 3.1e-150 xerD L Phage integrase, N-terminal SAM-like domain
PMCMCMFJ_01627 3.3e-61 3.6.1.55 F NUDIX domain
PMCMCMFJ_01628 1e-79 S AAA domain
PMCMCMFJ_01629 2.9e-117 fbiB 6.3.2.12, 6.3.2.17, 6.3.2.31, 6.3.2.34 S F420-0:Gamma-glutamyl ligase
PMCMCMFJ_01630 5.2e-69 yxaM EGP Major facilitator Superfamily
PMCMCMFJ_01631 8.6e-82 yxaM EGP Major facilitator Superfamily
PMCMCMFJ_01632 5.9e-45
PMCMCMFJ_01633 3.7e-58 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PMCMCMFJ_01635 2.1e-45 S PFAM Archaeal ATPase
PMCMCMFJ_01636 7.3e-74
PMCMCMFJ_01637 0.0 kup P Transport of potassium into the cell
PMCMCMFJ_01638 0.0 pepO 3.4.24.71 O Peptidase family M13
PMCMCMFJ_01639 2.3e-210 yttB EGP Major facilitator Superfamily
PMCMCMFJ_01640 1.5e-230 XK27_04775 S PAS domain
PMCMCMFJ_01641 4.5e-103 S Iron-sulfur cluster assembly protein
PMCMCMFJ_01642 8.7e-141 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PMCMCMFJ_01643 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PMCMCMFJ_01644 5.6e-255 yxbA 6.3.1.12 S ATP-grasp enzyme
PMCMCMFJ_01645 0.0 asnB 6.3.5.4 E Asparagine synthase
PMCMCMFJ_01646 1.6e-271 S Calcineurin-like phosphoesterase
PMCMCMFJ_01647 3.9e-84
PMCMCMFJ_01648 1.6e-105 tag 3.2.2.20 L glycosylase
PMCMCMFJ_01649 3.7e-260 L Transposase
PMCMCMFJ_01650 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PMCMCMFJ_01651 7.9e-73 nrdI F NrdI Flavodoxin like
PMCMCMFJ_01652 1.4e-192 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PMCMCMFJ_01653 2.5e-276 phoR 2.7.13.3 T Histidine kinase
PMCMCMFJ_01654 8.9e-119 T Transcriptional regulatory protein, C terminal
PMCMCMFJ_01655 1.2e-104 phoU P Plays a role in the regulation of phosphate uptake
PMCMCMFJ_01656 1.5e-138 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PMCMCMFJ_01657 4.6e-152 pstA P Phosphate transport system permease protein PstA
PMCMCMFJ_01658 1.3e-154 pstC P probably responsible for the translocation of the substrate across the membrane
PMCMCMFJ_01659 3.2e-145 pstS P Phosphate
PMCMCMFJ_01660 3.2e-26 xerC L Phage integrase, N-terminal SAM-like domain
PMCMCMFJ_01661 2.3e-82 yveB 2.7.4.29 I PAP2 superfamily
PMCMCMFJ_01662 0.0 pepN 3.4.11.2 E aminopeptidase
PMCMCMFJ_01663 2.8e-47 lysM M LysM domain
PMCMCMFJ_01664 7.4e-175
PMCMCMFJ_01665 4.3e-212 mdtG EGP Major facilitator Superfamily
PMCMCMFJ_01666 6.7e-88 ymdB S Macro domain protein
PMCMCMFJ_01668 6.7e-09
PMCMCMFJ_01669 1.6e-28
PMCMCMFJ_01672 1.5e-59 K Helix-turn-helix XRE-family like proteins
PMCMCMFJ_01673 3.3e-147 malG P ABC transporter permease
PMCMCMFJ_01674 1.1e-250 malF P Binding-protein-dependent transport system inner membrane component
PMCMCMFJ_01675 2.3e-213 malE G Bacterial extracellular solute-binding protein
PMCMCMFJ_01676 3e-209 msmX P Belongs to the ABC transporter superfamily
PMCMCMFJ_01677 1.4e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PMCMCMFJ_01678 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PMCMCMFJ_01679 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PMCMCMFJ_01680 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
PMCMCMFJ_01681 4.2e-56 S PAS domain
PMCMCMFJ_01682 9.1e-204 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PMCMCMFJ_01683 3.1e-178 yvdE K helix_turn _helix lactose operon repressor
PMCMCMFJ_01684 7e-144 ptp2 3.1.3.48 T Tyrosine phosphatase family
PMCMCMFJ_01685 3.9e-292 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PMCMCMFJ_01686 9.6e-152 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PMCMCMFJ_01687 2.3e-18
PMCMCMFJ_01688 4e-137 K Helix-turn-helix XRE-family like proteins
PMCMCMFJ_01689 2.3e-121 V Abi-like protein
PMCMCMFJ_01690 2.7e-146 I alpha/beta hydrolase fold
PMCMCMFJ_01691 4.9e-129 yibF S overlaps another CDS with the same product name
PMCMCMFJ_01692 2.2e-202 yibE S overlaps another CDS with the same product name
PMCMCMFJ_01693 1.4e-112
PMCMCMFJ_01694 1.2e-205 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PMCMCMFJ_01695 6.4e-224 S Cysteine-rich secretory protein family
PMCMCMFJ_01696 2.6e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PMCMCMFJ_01697 1.1e-257 glnPH2 P ABC transporter permease
PMCMCMFJ_01698 2.8e-135
PMCMCMFJ_01699 8.4e-125 luxT K Bacterial regulatory proteins, tetR family
PMCMCMFJ_01700 3.3e-183 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PMCMCMFJ_01701 5.6e-36
PMCMCMFJ_01703 5.4e-215 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PMCMCMFJ_01704 2.5e-179 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
PMCMCMFJ_01705 8.8e-177 yjbQ P TrkA C-terminal domain protein
PMCMCMFJ_01706 1.9e-113 yjbQ P TrkA C-terminal domain protein
PMCMCMFJ_01707 1.7e-106 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PMCMCMFJ_01708 1.7e-160 S Oxidoreductase family, NAD-binding Rossmann fold
PMCMCMFJ_01709 2.1e-130
PMCMCMFJ_01710 2.1e-116
PMCMCMFJ_01711 5e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PMCMCMFJ_01712 1.4e-98 G Aldose 1-epimerase
PMCMCMFJ_01713 5.2e-201 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PMCMCMFJ_01714 1.6e-111 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PMCMCMFJ_01715 0.0 XK27_08315 M Sulfatase
PMCMCMFJ_01717 0.0 S Phage minor structural protein
PMCMCMFJ_01718 3.3e-109 S phage tail
PMCMCMFJ_01719 0.0 xkdO D NLP P60 protein
PMCMCMFJ_01720 1.6e-85 S Bacteriophage Gp15 protein
PMCMCMFJ_01721 8.7e-35
PMCMCMFJ_01722 3.5e-83 N domain, Protein
PMCMCMFJ_01723 3e-51 S Minor capsid protein from bacteriophage
PMCMCMFJ_01724 4e-31 S Minor capsid protein
PMCMCMFJ_01725 1.6e-39 S Minor capsid protein
PMCMCMFJ_01726 2.4e-44
PMCMCMFJ_01727 4.6e-154 gpG
PMCMCMFJ_01728 1e-36 S Phage minor structural protein GP20
PMCMCMFJ_01730 2.2e-165 S Phage minor capsid protein 2
PMCMCMFJ_01731 4.9e-216 S Phage portal protein, SPP1 Gp6-like
PMCMCMFJ_01732 3.2e-215 S Terminase RNAseH like domain
PMCMCMFJ_01733 8.3e-85 L transposase activity
PMCMCMFJ_01734 5.4e-111 K Belongs to the N(4) N(6)-methyltransferase family
PMCMCMFJ_01735 2.2e-30
PMCMCMFJ_01737 2.2e-101 1.8.4.10, 1.8.4.8, 2.7.7.4 EH sulfate reduction
PMCMCMFJ_01738 4.3e-24 S ASCH domain
PMCMCMFJ_01739 2.9e-07
PMCMCMFJ_01747 4.7e-55 dnaC L IstB-like ATP binding protein
PMCMCMFJ_01748 1.7e-34 S Conserved phage C-terminus (Phg_2220_C)
PMCMCMFJ_01749 2.2e-24 S Protein of unknown function (DUF1071)
PMCMCMFJ_01751 4.4e-40 ropB K Helix-turn-helix domain
PMCMCMFJ_01752 6.2e-111 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PMCMCMFJ_01753 6.6e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PMCMCMFJ_01754 1.1e-71 yslB S Protein of unknown function (DUF2507)
PMCMCMFJ_01755 1.1e-259 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
PMCMCMFJ_01757 1.7e-28 mloB K Putative ATP-dependent DNA helicase recG C-terminal
PMCMCMFJ_01758 3.5e-248 lctP C L-lactate permease
PMCMCMFJ_01759 1e-288 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
PMCMCMFJ_01760 8.9e-101 treR K UTRA
PMCMCMFJ_01761 6.1e-282 treB G phosphotransferase system
PMCMCMFJ_01762 5.7e-65 spxA_2 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PMCMCMFJ_01763 1.2e-190 yrvN L AAA C-terminal domain
PMCMCMFJ_01764 2.2e-251 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PMCMCMFJ_01765 9e-83 K Acetyltransferase (GNAT) domain
PMCMCMFJ_01766 1.3e-229 S Putative peptidoglycan binding domain
PMCMCMFJ_01767 7.5e-95 S ECF-type riboflavin transporter, S component
PMCMCMFJ_01768 2.8e-98 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PMCMCMFJ_01769 9.3e-204 pbpX1 V Beta-lactamase
PMCMCMFJ_01770 1.4e-115 lacA 2.3.1.79 S Transferase hexapeptide repeat
PMCMCMFJ_01771 1.9e-80 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PMCMCMFJ_01772 4e-57 K Helix-turn-helix domain
PMCMCMFJ_01773 2.7e-111 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PMCMCMFJ_01774 2.1e-171 ppaC 3.6.1.1 C inorganic pyrophosphatase
PMCMCMFJ_01775 5.6e-183 K Transcriptional regulator
PMCMCMFJ_01776 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PMCMCMFJ_01777 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PMCMCMFJ_01778 3.5e-109 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PMCMCMFJ_01779 0.0 snf 2.7.11.1 KL domain protein
PMCMCMFJ_01780 2e-288 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PMCMCMFJ_01781 2.1e-221 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PMCMCMFJ_01782 0.0 lacZ 3.2.1.23 G -beta-galactosidase
PMCMCMFJ_01783 0.0 lacS G Transporter
PMCMCMFJ_01784 3.2e-165 lacR K Transcriptional regulator
PMCMCMFJ_01785 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PMCMCMFJ_01786 7e-146 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
PMCMCMFJ_01787 4.5e-188 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PMCMCMFJ_01788 6.4e-162 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
PMCMCMFJ_01789 2e-106 K Transcriptional regulator, AbiEi antitoxin
PMCMCMFJ_01790 4.7e-188 K Periplasmic binding protein-like domain
PMCMCMFJ_01791 1.3e-237 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PMCMCMFJ_01792 8.7e-229 S Tetratricopeptide repeat protein
PMCMCMFJ_01793 2.3e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PMCMCMFJ_01794 1.9e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PMCMCMFJ_01795 5.5e-212 rpsA 1.17.7.4 J Ribosomal protein S1
PMCMCMFJ_01796 5e-114 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PMCMCMFJ_01797 2.7e-18 M Lysin motif
PMCMCMFJ_01798 8.7e-114 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PMCMCMFJ_01799 2.6e-146 S Putative ABC-transporter type IV
PMCMCMFJ_01800 1.7e-07 S LPXTG cell wall anchor motif
PMCMCMFJ_01801 1e-95 ybaT E Amino acid permease
PMCMCMFJ_01803 7.6e-26 WQ51_00220 K Helix-turn-helix XRE-family like proteins
PMCMCMFJ_01804 1.4e-22 S CAAX protease self-immunity
PMCMCMFJ_01805 1.5e-25 S CAAX protease self-immunity
PMCMCMFJ_01807 6.1e-48 E Pfam:DUF955
PMCMCMFJ_01808 1.7e-23 relB L Addiction module antitoxin, RelB DinJ family
PMCMCMFJ_01809 9.6e-18 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
PMCMCMFJ_01811 9.8e-134 topA2 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PMCMCMFJ_01813 1.1e-23 S CAAX protease self-immunity
PMCMCMFJ_01815 4.1e-34
PMCMCMFJ_01816 1e-66 doc S Fic/DOC family
PMCMCMFJ_01818 9.4e-51 L An automated process has identified a potential problem with this gene model
PMCMCMFJ_01819 7.9e-16 L An automated process has identified a potential problem with this gene model
PMCMCMFJ_01821 1.2e-24 2.7.1.200, 2.7.1.202 G phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2
PMCMCMFJ_01822 9.7e-205 gatC G PTS system sugar-specific permease component
PMCMCMFJ_01823 6.5e-18 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
PMCMCMFJ_01824 3.5e-57 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PMCMCMFJ_01825 8.3e-123 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
PMCMCMFJ_01826 2.4e-99 L An automated process has identified a potential problem with this gene model
PMCMCMFJ_01827 3.3e-241 V N-6 DNA Methylase
PMCMCMFJ_01828 3.3e-86 bcgIB 2.1.1.72, 3.1.21.3 V Type I restriction modification DNA specificity domain
PMCMCMFJ_01829 1.6e-35 S Bacterial toxin of type II toxin-antitoxin system, YafQ
PMCMCMFJ_01830 5e-39 relB L RelB antitoxin
PMCMCMFJ_01832 2.9e-97 D VirC1 protein
PMCMCMFJ_01833 3.8e-15 S Domain of Unknown Function with PDB structure (DUF3850)
PMCMCMFJ_01835 5.3e-133 L Transposase
PMCMCMFJ_01836 4e-56 L Transposase
PMCMCMFJ_01837 6.5e-104 L PFAM Integrase catalytic
PMCMCMFJ_01838 2.5e-118 clcA P chloride
PMCMCMFJ_01839 1.6e-60 clcA P chloride
PMCMCMFJ_01840 4.7e-26 K FCD
PMCMCMFJ_01841 3.4e-15 K FCD
PMCMCMFJ_01842 1.5e-102 GM NmrA-like family
PMCMCMFJ_01843 1.9e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PMCMCMFJ_01844 3.5e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PMCMCMFJ_01845 2.4e-167 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PMCMCMFJ_01846 4.2e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PMCMCMFJ_01847 3.6e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PMCMCMFJ_01848 4e-245 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PMCMCMFJ_01849 2.4e-211 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PMCMCMFJ_01850 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PMCMCMFJ_01851 3.5e-248 lctP C L-lactate permease
PMCMCMFJ_01852 4e-148 glcU U sugar transport
PMCMCMFJ_01853 2.5e-72 fcbD 2.7.8.12 GT2 M Glycosyltransferase like family 2
PMCMCMFJ_01854 2.4e-52 Z012_10770 M Domain of unknown function (DUF1919)
PMCMCMFJ_01855 2e-104 GT4 M Glycosyl transferases group 1
PMCMCMFJ_01856 1.3e-74 pssE S Glycosyltransferase family 28 C-terminal domain
PMCMCMFJ_01857 5e-49 cpsF M Oligosaccharide biosynthesis protein Alg14 like
PMCMCMFJ_01858 9.4e-158 M Glycosyltransferase
PMCMCMFJ_01859 9.1e-121 rfbP M Bacterial sugar transferase
PMCMCMFJ_01860 3.7e-145 ywqE 3.1.3.48 GM PHP domain protein
PMCMCMFJ_01861 5.8e-122 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PMCMCMFJ_01862 3.6e-144 epsB M biosynthesis protein
PMCMCMFJ_01863 1.7e-177 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PMCMCMFJ_01864 9.2e-92 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
PMCMCMFJ_01865 1.3e-124 terC P Integral membrane protein TerC family
PMCMCMFJ_01866 5.8e-64 yeaO S Protein of unknown function, DUF488
PMCMCMFJ_01867 4e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PMCMCMFJ_01868 1.3e-290 glnP P ABC transporter permease
PMCMCMFJ_01869 3.4e-135 glnQ E ABC transporter, ATP-binding protein
PMCMCMFJ_01870 2.5e-148 S Protein of unknown function (DUF805)
PMCMCMFJ_01871 7.6e-160 L HNH nucleases
PMCMCMFJ_01872 1.1e-118 yfbR S HD containing hydrolase-like enzyme
PMCMCMFJ_01873 3.1e-131 G Glycosyl hydrolases family 8
PMCMCMFJ_01874 5.6e-36 G Glycosyl hydrolases family 8
PMCMCMFJ_01875 4.5e-189 ydaM M Glycosyl transferase
PMCMCMFJ_01876 3.5e-111 G phosphoglycerate mutase
PMCMCMFJ_01877 1.4e-90 ygfC K Bacterial regulatory proteins, tetR family
PMCMCMFJ_01878 9.5e-176 hrtB V ABC transporter permease
PMCMCMFJ_01879 2e-102 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PMCMCMFJ_01880 3.8e-273 pipD E Dipeptidase
PMCMCMFJ_01881 2.3e-164 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PMCMCMFJ_01882 1.6e-294 L Nuclease-related domain
PMCMCMFJ_01883 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PMCMCMFJ_01884 8.3e-106 S Repeat protein
PMCMCMFJ_01885 3.9e-127 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PMCMCMFJ_01886 5.1e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PMCMCMFJ_01887 5.4e-56 XK27_04120 S Putative amino acid metabolism
PMCMCMFJ_01888 3.5e-216 iscS 2.8.1.7 E Aminotransferase class V
PMCMCMFJ_01889 1.2e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PMCMCMFJ_01890 6.7e-37
PMCMCMFJ_01891 2.8e-102 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PMCMCMFJ_01892 3.6e-31 cspA K 'Cold-shock' DNA-binding domain
PMCMCMFJ_01893 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PMCMCMFJ_01894 2.8e-74 gpsB D DivIVA domain protein
PMCMCMFJ_01895 5.7e-149 ylmH S S4 domain protein
PMCMCMFJ_01896 1.7e-45 yggT S YGGT family
PMCMCMFJ_01897 7.3e-74 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PMCMCMFJ_01898 1.7e-206 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PMCMCMFJ_01899 1.3e-246 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PMCMCMFJ_01900 4.5e-152 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PMCMCMFJ_01901 3.7e-207 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PMCMCMFJ_01902 5e-262 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PMCMCMFJ_01903 1.5e-175 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PMCMCMFJ_01904 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PMCMCMFJ_01905 1.8e-54 ftsL D Cell division protein FtsL
PMCMCMFJ_01906 7.2e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PMCMCMFJ_01907 6.3e-78 mraZ K Belongs to the MraZ family
PMCMCMFJ_01908 6.4e-54 S Protein of unknown function (DUF3397)
PMCMCMFJ_01910 2.7e-94 mreD
PMCMCMFJ_01911 2e-147 mreC M Involved in formation and maintenance of cell shape
PMCMCMFJ_01912 2.4e-176 mreB D cell shape determining protein MreB
PMCMCMFJ_01913 2.3e-108 radC L DNA repair protein
PMCMCMFJ_01914 5.7e-126 S Haloacid dehalogenase-like hydrolase
PMCMCMFJ_01915 1.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PMCMCMFJ_01916 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PMCMCMFJ_01917 2.5e-52
PMCMCMFJ_01918 1.1e-132 S AAA domain, putative AbiEii toxin, Type IV TA system
PMCMCMFJ_01919 0.0 3.6.3.8 P P-type ATPase
PMCMCMFJ_01921 6.5e-44
PMCMCMFJ_01922 1.5e-94 S Protein of unknown function (DUF3990)
PMCMCMFJ_01923 5.2e-170 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
PMCMCMFJ_01924 2.1e-65 2.4.1.83 GT2 S GtrA-like protein
PMCMCMFJ_01925 5.5e-44 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PMCMCMFJ_01926 3.2e-119 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PMCMCMFJ_01927 1.7e-184 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PMCMCMFJ_01928 2e-225 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PMCMCMFJ_01929 7.3e-214 iscS2 2.8.1.7 E Aminotransferase class V
PMCMCMFJ_01930 6.2e-294 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PMCMCMFJ_01931 1.4e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PMCMCMFJ_01932 1.3e-84 yueI S Protein of unknown function (DUF1694)
PMCMCMFJ_01933 2.2e-238 rarA L recombination factor protein RarA
PMCMCMFJ_01934 8.4e-39
PMCMCMFJ_01935 1.8e-78 usp6 T universal stress protein
PMCMCMFJ_01936 4.7e-216 rodA D Belongs to the SEDS family
PMCMCMFJ_01937 3.3e-33 S Protein of unknown function (DUF2969)
PMCMCMFJ_01938 1e-50 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PMCMCMFJ_01939 1.2e-177 mbl D Cell shape determining protein MreB Mrl
PMCMCMFJ_01940 2e-30 ywzB S Protein of unknown function (DUF1146)
PMCMCMFJ_01941 9e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PMCMCMFJ_01942 3.3e-240 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PMCMCMFJ_01943 2e-172 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PMCMCMFJ_01944 2.8e-282 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PMCMCMFJ_01945 2.8e-91 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PMCMCMFJ_01946 3.4e-46 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PMCMCMFJ_01947 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PMCMCMFJ_01948 3.8e-128 atpB C it plays a direct role in the translocation of protons across the membrane
PMCMCMFJ_01949 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PMCMCMFJ_01950 3.7e-190 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PMCMCMFJ_01951 7.3e-155 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PMCMCMFJ_01952 3.1e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PMCMCMFJ_01953 1.3e-113 tdk 2.7.1.21 F thymidine kinase
PMCMCMFJ_01954 1.7e-262 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
PMCMCMFJ_01957 3.9e-195 ampC V Beta-lactamase
PMCMCMFJ_01958 3.8e-217 EGP Major facilitator Superfamily
PMCMCMFJ_01959 3.2e-253 pgi 5.3.1.9 G Belongs to the GPI family
PMCMCMFJ_01960 3.8e-105 vanZ V VanZ like family
PMCMCMFJ_01961 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PMCMCMFJ_01962 7.2e-267 yclK 2.7.13.3, 4.6.1.1 T Histidine kinase
PMCMCMFJ_01963 4.4e-129 K Transcriptional regulatory protein, C terminal
PMCMCMFJ_01964 7.7e-67 S SdpI/YhfL protein family
PMCMCMFJ_01965 6.1e-190 manA 5.3.1.8 G mannose-6-phosphate isomerase
PMCMCMFJ_01966 9.9e-227 patB 4.4.1.8 E Aminotransferase, class I
PMCMCMFJ_01967 2.5e-89 M Protein of unknown function (DUF3737)
PMCMCMFJ_01968 2e-18 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PMCMCMFJ_01969 2.9e-12
PMCMCMFJ_01972 2.9e-08
PMCMCMFJ_01974 5.7e-109 K BRO family, N-terminal domain
PMCMCMFJ_01976 9.8e-18 K Transcriptional
PMCMCMFJ_01978 6.7e-12
PMCMCMFJ_01980 9.1e-76 sip L Belongs to the 'phage' integrase family
PMCMCMFJ_01981 2.2e-101 K Helix-turn-helix domain, rpiR family
PMCMCMFJ_01982 4.9e-82 rarA L MgsA AAA+ ATPase C terminal
PMCMCMFJ_01983 1.2e-225 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMCMCMFJ_01985 1.8e-104 3.2.2.20 K acetyltransferase
PMCMCMFJ_01986 2.3e-93 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PMCMCMFJ_01987 3e-24
PMCMCMFJ_01988 6.1e-151
PMCMCMFJ_01989 9.8e-239 steT E amino acid
PMCMCMFJ_01990 8.6e-243 steT E amino acid
PMCMCMFJ_01991 4.9e-130 yfeJ 6.3.5.2 F glutamine amidotransferase
PMCMCMFJ_01992 1.9e-147 glnH ET ABC transporter
PMCMCMFJ_01993 1.4e-80 K Transcriptional regulator, MarR family
PMCMCMFJ_01994 1.5e-308 XK27_09600 V ABC transporter, ATP-binding protein
PMCMCMFJ_01995 0.0 V ABC transporter transmembrane region
PMCMCMFJ_01996 8.4e-102 S ABC-type cobalt transport system, permease component
PMCMCMFJ_01997 4.7e-85 G MFS/sugar transport protein
PMCMCMFJ_01998 2.3e-151 G MFS/sugar transport protein
PMCMCMFJ_01999 4.7e-114 udk 2.7.1.48 F Zeta toxin
PMCMCMFJ_02000 1.9e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PMCMCMFJ_02001 3.4e-149 glnH ET ABC transporter substrate-binding protein
PMCMCMFJ_02002 9.7e-91 gluC P ABC transporter permease
PMCMCMFJ_02003 6.8e-108 glnP P ABC transporter permease
PMCMCMFJ_02004 1.1e-164 S Protein of unknown function (DUF2974)
PMCMCMFJ_02005 9.4e-269 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
PMCMCMFJ_02006 6.6e-44
PMCMCMFJ_02007 1.6e-171 2.7.1.2 GK ROK family
PMCMCMFJ_02008 4.8e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PMCMCMFJ_02009 2e-295 S SLAP domain
PMCMCMFJ_02010 5.3e-80
PMCMCMFJ_02018 4.5e-30 S Bacteriophage holin of superfamily 6 (Holin_LLH)
PMCMCMFJ_02019 2.1e-85 S N-acetylmuramoyl-L-alanine amidase activity
PMCMCMFJ_02021 1.8e-10
PMCMCMFJ_02022 1.8e-308 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PMCMCMFJ_02023 1.5e-22 S Protein of unknown function (DUF2929)
PMCMCMFJ_02024 0.0 dnaE 2.7.7.7 L DNA polymerase
PMCMCMFJ_02025 3.3e-183 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PMCMCMFJ_02026 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PMCMCMFJ_02027 1e-167 cvfB S S1 domain
PMCMCMFJ_02028 2.9e-165 xerD D recombinase XerD
PMCMCMFJ_02029 2.6e-61 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PMCMCMFJ_02030 7.6e-132 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PMCMCMFJ_02031 4.1e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PMCMCMFJ_02032 3.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PMCMCMFJ_02033 1e-95
PMCMCMFJ_02034 7.8e-78 2.5.1.74 H UbiA prenyltransferase family
PMCMCMFJ_02036 4.5e-185 3.2.1.18 GH33 M Rib/alpha-like repeat
PMCMCMFJ_02037 8.7e-117 3.2.1.18 GH33 M Rib/alpha-like repeat
PMCMCMFJ_02038 4.9e-99 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PMCMCMFJ_02040 7.8e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PMCMCMFJ_02041 2.4e-43 K Helix-turn-helix
PMCMCMFJ_02042 3.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PMCMCMFJ_02043 1.4e-226 pbuX F xanthine permease
PMCMCMFJ_02044 2.5e-152 msmR K AraC-like ligand binding domain
PMCMCMFJ_02045 4.4e-285 pipD E Dipeptidase
PMCMCMFJ_02046 1.3e-47 adk 2.7.4.3 F AAA domain
PMCMCMFJ_02047 2.1e-80 K acetyltransferase
PMCMCMFJ_02048 1.4e-245 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PMCMCMFJ_02049 2.7e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PMCMCMFJ_02050 1.8e-47 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PMCMCMFJ_02051 4.5e-68 S Domain of unknown function (DUF1934)
PMCMCMFJ_02052 3.4e-79
PMCMCMFJ_02053 1e-242 cpdA S Calcineurin-like phosphoesterase
PMCMCMFJ_02054 1.6e-218 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PMCMCMFJ_02055 1.1e-68 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PMCMCMFJ_02056 1e-107 ypsA S Belongs to the UPF0398 family
PMCMCMFJ_02057 4.5e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PMCMCMFJ_02058 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PMCMCMFJ_02059 6.1e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PMCMCMFJ_02060 1.3e-114 dnaD L DnaD domain protein
PMCMCMFJ_02061 1.5e-260 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PMCMCMFJ_02062 9.2e-89 ypmB S Protein conserved in bacteria
PMCMCMFJ_02063 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PMCMCMFJ_02064 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PMCMCMFJ_02065 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PMCMCMFJ_02066 4.8e-136 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
PMCMCMFJ_02067 1.4e-178 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PMCMCMFJ_02068 2.1e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PMCMCMFJ_02069 6.9e-184 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PMCMCMFJ_02070 1.3e-116 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
PMCMCMFJ_02071 8.3e-265 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
PMCMCMFJ_02072 9.7e-169
PMCMCMFJ_02073 7.5e-143
PMCMCMFJ_02074 3.9e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PMCMCMFJ_02075 1.4e-26
PMCMCMFJ_02076 6.7e-145
PMCMCMFJ_02077 5.1e-137
PMCMCMFJ_02078 4.5e-141
PMCMCMFJ_02079 2.8e-123 skfE V ATPases associated with a variety of cellular activities
PMCMCMFJ_02080 1.4e-60 yvoA_1 K Transcriptional regulator, GntR family
PMCMCMFJ_02081 1.7e-240 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PMCMCMFJ_02082 1.4e-152 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PMCMCMFJ_02083 3.5e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
PMCMCMFJ_02084 4.8e-81 mutT 3.6.1.55 F NUDIX domain
PMCMCMFJ_02085 1.4e-127 S Peptidase family M23
PMCMCMFJ_02086 1.5e-245 brnQ U Component of the transport system for branched-chain amino acids
PMCMCMFJ_02087 0.0 L Plasmid pRiA4b ORF-3-like protein
PMCMCMFJ_02088 8.9e-133 L Phage integrase family
PMCMCMFJ_02089 5.1e-66 rpsI J Belongs to the universal ribosomal protein uS9 family
PMCMCMFJ_02090 5.9e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PMCMCMFJ_02091 8.4e-145 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PMCMCMFJ_02092 7.2e-136 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PMCMCMFJ_02093 4.6e-157 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PMCMCMFJ_02094 4.1e-153 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PMCMCMFJ_02095 1.4e-60 rplQ J Ribosomal protein L17
PMCMCMFJ_02096 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PMCMCMFJ_02097 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PMCMCMFJ_02098 3.6e-55 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PMCMCMFJ_02099 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PMCMCMFJ_02100 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PMCMCMFJ_02101 3.5e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PMCMCMFJ_02102 1.1e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PMCMCMFJ_02103 2.6e-71 rplO J Binds to the 23S rRNA
PMCMCMFJ_02104 2.3e-24 rpmD J Ribosomal protein L30
PMCMCMFJ_02105 4.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PMCMCMFJ_02106 1.1e-54 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PMCMCMFJ_02107 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PMCMCMFJ_02108 3.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PMCMCMFJ_02109 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PMCMCMFJ_02110 5.5e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PMCMCMFJ_02111 3.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PMCMCMFJ_02112 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PMCMCMFJ_02113 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PMCMCMFJ_02114 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
PMCMCMFJ_02115 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PMCMCMFJ_02116 2.7e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PMCMCMFJ_02117 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PMCMCMFJ_02118 1.1e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PMCMCMFJ_02119 7.3e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PMCMCMFJ_02120 3.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PMCMCMFJ_02121 2.1e-106 rplD J Forms part of the polypeptide exit tunnel
PMCMCMFJ_02122 9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PMCMCMFJ_02123 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PMCMCMFJ_02124 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PMCMCMFJ_02125 2.7e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PMCMCMFJ_02126 7.8e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PMCMCMFJ_02127 3.6e-120 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
PMCMCMFJ_02128 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PMCMCMFJ_02129 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PMCMCMFJ_02130 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PMCMCMFJ_02131 1.3e-81 yebR 1.8.4.14 T GAF domain-containing protein
PMCMCMFJ_02133 1.6e-08
PMCMCMFJ_02134 1.6e-08
PMCMCMFJ_02135 1.4e-83 K FR47-like protein
PMCMCMFJ_02136 1.2e-17
PMCMCMFJ_02137 1.4e-309 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
PMCMCMFJ_02138 2.9e-69 S Iron-sulphur cluster biosynthesis
PMCMCMFJ_02139 5.8e-192 ybiR P Citrate transporter
PMCMCMFJ_02140 9.7e-95 lemA S LemA family
PMCMCMFJ_02141 1.7e-157 htpX O Belongs to the peptidase M48B family
PMCMCMFJ_02142 7.9e-174 K helix_turn_helix, arabinose operon control protein
PMCMCMFJ_02143 1.4e-248 cbiO1 S ABC transporter, ATP-binding protein
PMCMCMFJ_02144 9.6e-78 P Cobalt transport protein
PMCMCMFJ_02145 1.8e-175 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
PMCMCMFJ_02146 6.5e-91 G Peptidase_C39 like family
PMCMCMFJ_02147 2.8e-162 M NlpC/P60 family
PMCMCMFJ_02148 8.4e-25 G Peptidase_C39 like family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)