ORF_ID e_value Gene_name EC_number CAZy COGs Description
LIEMIIIA_00001 1.1e-75 V ABC transporter transmembrane region
LIEMIIIA_00002 6.5e-64 L RelB antitoxin
LIEMIIIA_00003 2.1e-131 cobQ S glutamine amidotransferase
LIEMIIIA_00004 1.8e-81 M NlpC/P60 family
LIEMIIIA_00007 2.6e-155
LIEMIIIA_00008 7.8e-38
LIEMIIIA_00009 2e-32
LIEMIIIA_00010 6.2e-163 EG EamA-like transporter family
LIEMIIIA_00011 5e-165 EG EamA-like transporter family
LIEMIIIA_00012 1.2e-139 yicL EG EamA-like transporter family
LIEMIIIA_00013 4.3e-107
LIEMIIIA_00014 1.1e-110
LIEMIIIA_00015 5.8e-186 XK27_05540 S DUF218 domain
LIEMIIIA_00016 9.3e-264 yheS_2 S ATPases associated with a variety of cellular activities
LIEMIIIA_00017 4.7e-85
LIEMIIIA_00018 3.9e-57
LIEMIIIA_00019 4.7e-25 S Protein conserved in bacteria
LIEMIIIA_00020 1.3e-54 S protein encoded in hypervariable junctions of pilus gene clusters
LIEMIIIA_00021 9.4e-132 comFC S Competence protein
LIEMIIIA_00022 4.7e-246 comFA L Helicase C-terminal domain protein
LIEMIIIA_00023 2.5e-118 yvyE 3.4.13.9 S YigZ family
LIEMIIIA_00024 1.9e-209 tagO 2.7.8.33, 2.7.8.35 M transferase
LIEMIIIA_00025 7.4e-220 rny S Endoribonuclease that initiates mRNA decay
LIEMIIIA_00026 8.5e-196 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LIEMIIIA_00027 1.1e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LIEMIIIA_00028 5.2e-97 ymfM S Helix-turn-helix domain
LIEMIIIA_00029 2.3e-133 IQ Enoyl-(Acyl carrier protein) reductase
LIEMIIIA_00030 1.9e-236 S Peptidase M16
LIEMIIIA_00031 9e-223 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
LIEMIIIA_00032 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
LIEMIIIA_00033 1.7e-69 WQ51_03320 S Protein of unknown function (DUF1149)
LIEMIIIA_00034 4.2e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
LIEMIIIA_00035 2.6e-214 yubA S AI-2E family transporter
LIEMIIIA_00036 2.2e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
LIEMIIIA_00037 6.7e-192 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
LIEMIIIA_00038 1.4e-34
LIEMIIIA_00039 3.6e-63
LIEMIIIA_00042 4.9e-118
LIEMIIIA_00043 3.8e-104 pncA Q Isochorismatase family
LIEMIIIA_00045 2e-35
LIEMIIIA_00046 0.0 snf 2.7.11.1 KL domain protein
LIEMIIIA_00047 3.5e-109 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
LIEMIIIA_00048 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LIEMIIIA_00049 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LIEMIIIA_00050 0.0 L Plasmid pRiA4b ORF-3-like protein
LIEMIIIA_00051 7.5e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
LIEMIIIA_00052 8.6e-87 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LIEMIIIA_00053 3e-89 ntd 2.4.2.6 F Nucleoside
LIEMIIIA_00054 5.2e-08
LIEMIIIA_00055 2.4e-73 S cog cog1373
LIEMIIIA_00056 5.6e-179 S PFAM Archaeal ATPase
LIEMIIIA_00057 4.5e-192 I transferase activity, transferring acyl groups other than amino-acyl groups
LIEMIIIA_00058 7.4e-128 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
LIEMIIIA_00059 0.0 clpE O Belongs to the ClpA ClpB family
LIEMIIIA_00060 2.3e-44 XK27_09445 S Domain of unknown function (DUF1827)
LIEMIIIA_00061 9.4e-305 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
LIEMIIIA_00062 1.4e-140 hlyX S Transporter associated domain
LIEMIIIA_00063 2.7e-74
LIEMIIIA_00064 1.6e-85
LIEMIIIA_00065 1.5e-144 recX 2.4.1.337 GT4 S Regulatory protein RecX
LIEMIIIA_00066 4.6e-263 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LIEMIIIA_00067 1.4e-118 D Alpha beta
LIEMIIIA_00068 1.1e-119 S PAS domain
LIEMIIIA_00069 1.6e-11
LIEMIIIA_00070 2.7e-57
LIEMIIIA_00071 6.6e-56
LIEMIIIA_00072 4e-08
LIEMIIIA_00073 4.3e-24 S SLAP domain
LIEMIIIA_00074 7.6e-25 S SLAP domain
LIEMIIIA_00075 4.7e-182 pepA E M42 glutamyl aminopeptidase
LIEMIIIA_00076 2.2e-311 ybiT S ABC transporter, ATP-binding protein
LIEMIIIA_00077 5.9e-174 S Aldo keto reductase
LIEMIIIA_00078 2.7e-138
LIEMIIIA_00079 2.8e-202 steT E amino acid
LIEMIIIA_00080 2.4e-26 steT E amino acid
LIEMIIIA_00081 8.6e-243 steT E amino acid
LIEMIIIA_00082 1.9e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
LIEMIIIA_00083 1.9e-147 glnH ET ABC transporter
LIEMIIIA_00084 1.4e-80 K Transcriptional regulator, MarR family
LIEMIIIA_00085 6.9e-309 XK27_09600 V ABC transporter, ATP-binding protein
LIEMIIIA_00086 0.0 V ABC transporter transmembrane region
LIEMIIIA_00087 1.6e-100 S ABC-type cobalt transport system, permease component
LIEMIIIA_00088 1e-246 G MFS/sugar transport protein
LIEMIIIA_00089 1e-44 udk 2.7.1.48 F Zeta toxin
LIEMIIIA_00090 3.8e-46 udk 2.7.1.48 F Zeta toxin
LIEMIIIA_00091 4.8e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
LIEMIIIA_00092 1.2e-146 glnH ET ABC transporter substrate-binding protein
LIEMIIIA_00093 3.7e-90 gluC P ABC transporter permease
LIEMIIIA_00094 4.7e-109 glnP P ABC transporter permease
LIEMIIIA_00095 1.1e-164 S Protein of unknown function (DUF2974)
LIEMIIIA_00096 5.6e-86
LIEMIIIA_00097 6.3e-212 S Uncharacterized protein conserved in bacteria (DUF2325)
LIEMIIIA_00098 1.3e-235 G Bacterial extracellular solute-binding protein
LIEMIIIA_00099 7.7e-162 2.7.7.12 C Domain of unknown function (DUF4931)
LIEMIIIA_00100 1e-165 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LIEMIIIA_00101 1e-125 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LIEMIIIA_00102 0.0 kup P Transport of potassium into the cell
LIEMIIIA_00103 9.1e-175 rihB 3.2.2.1 F Nucleoside
LIEMIIIA_00104 2.8e-134 ydhQ K UbiC transcription regulator-associated domain protein
LIEMIIIA_00105 1.2e-154 S hydrolase
LIEMIIIA_00106 2.5e-59 S Enterocin A Immunity
LIEMIIIA_00107 3.1e-136 glcR K DeoR C terminal sensor domain
LIEMIIIA_00108 2.6e-65 C 2Fe-2S iron-sulfur cluster binding domain
LIEMIIIA_00109 4.1e-156 crtI 1.3.99.23, 5.2.1.13 Q HI0933-like protein
LIEMIIIA_00110 4.3e-52 K helix_turn_helix gluconate operon transcriptional repressor
LIEMIIIA_00111 7.2e-183 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
LIEMIIIA_00112 3.8e-115 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
LIEMIIIA_00113 4.7e-159 D nuclear chromosome segregation
LIEMIIIA_00114 1.2e-105 G Phosphoglycerate mutase family
LIEMIIIA_00115 2.6e-89 G Histidine phosphatase superfamily (branch 1)
LIEMIIIA_00116 6.6e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
LIEMIIIA_00117 1.2e-115 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
LIEMIIIA_00119 3.1e-107 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
LIEMIIIA_00120 1.7e-201 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LIEMIIIA_00121 2.2e-120 lsa S ABC transporter
LIEMIIIA_00122 1.5e-18 S CRISPR-associated protein (Cas_Csn2)
LIEMIIIA_00123 1.2e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
LIEMIIIA_00124 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
LIEMIIIA_00125 3.5e-71 yqeY S YqeY-like protein
LIEMIIIA_00126 2.5e-175 phoH T phosphate starvation-inducible protein PhoH
LIEMIIIA_00127 2.2e-93 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LIEMIIIA_00128 2.1e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LIEMIIIA_00129 4.4e-135 recO L Involved in DNA repair and RecF pathway recombination
LIEMIIIA_00130 4.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
LIEMIIIA_00131 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
LIEMIIIA_00132 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
LIEMIIIA_00133 9.9e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
LIEMIIIA_00134 1.4e-127 S Peptidase family M23
LIEMIIIA_00135 4.8e-81 mutT 3.6.1.55 F NUDIX domain
LIEMIIIA_00136 3.5e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
LIEMIIIA_00137 1.4e-152 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LIEMIIIA_00138 1.7e-240 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
LIEMIIIA_00139 1.4e-60 yvoA_1 K Transcriptional regulator, GntR family
LIEMIIIA_00140 9.6e-124 skfE V ATPases associated with a variety of cellular activities
LIEMIIIA_00141 4.5e-141
LIEMIIIA_00142 5.1e-137
LIEMIIIA_00143 6.7e-145
LIEMIIIA_00144 1.4e-26
LIEMIIIA_00145 3.9e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
LIEMIIIA_00146 7.5e-143
LIEMIIIA_00147 9.7e-169
LIEMIIIA_00148 6e-29 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
LIEMIIIA_00149 1.6e-227 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
LIEMIIIA_00150 1.3e-116 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
LIEMIIIA_00151 6.9e-184 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
LIEMIIIA_00152 2.1e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
LIEMIIIA_00153 1.4e-178 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
LIEMIIIA_00154 4.8e-136 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
LIEMIIIA_00155 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
LIEMIIIA_00156 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
LIEMIIIA_00157 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
LIEMIIIA_00158 1.6e-147 sip L Belongs to the 'phage' integrase family
LIEMIIIA_00159 2.5e-13
LIEMIIIA_00163 6e-14
LIEMIIIA_00164 3e-59
LIEMIIIA_00166 2.8e-13 K Helix-turn-helix XRE-family like proteins
LIEMIIIA_00167 2e-20 cro K Helix-turn-helix XRE-family like proteins
LIEMIIIA_00169 1.1e-90 S AntA/AntB antirepressor
LIEMIIIA_00174 7.2e-10
LIEMIIIA_00175 5e-07 K Helix-turn-helix XRE-family like proteins
LIEMIIIA_00177 7.7e-48
LIEMIIIA_00179 2.4e-59 S Protein of unknown function (DUF1071)
LIEMIIIA_00180 4e-33 S Conserved phage C-terminus (Phg_2220_C)
LIEMIIIA_00181 1.4e-51 dnaC L IstB-like ATP binding protein
LIEMIIIA_00187 1.2e-40 rusA 3.1.22.4 L Endodeoxyribonuclease RusA
LIEMIIIA_00188 2.1e-14
LIEMIIIA_00196 2.7e-35 S HicB_like antitoxin of bacterial toxin-antitoxin system
LIEMIIIA_00197 5.2e-10 hicA N HicA toxin of bacterial toxin-antitoxin,
LIEMIIIA_00198 1.5e-28 L Terminase small subunit
LIEMIIIA_00199 1.8e-230 S Terminase-like family
LIEMIIIA_00200 7e-142 S Protein of unknown function (DUF1073)
LIEMIIIA_00201 1e-97 S Phage Mu protein F like protein
LIEMIIIA_00202 1.1e-07 S Lysin motif
LIEMIIIA_00203 3.9e-87 S Uncharacterized protein conserved in bacteria (DUF2213)
LIEMIIIA_00204 1.6e-58
LIEMIIIA_00205 3.5e-142 Z012_11565 S Uncharacterized protein conserved in bacteria (DUF2184)
LIEMIIIA_00206 2.1e-30 S Protein of unknown function (DUF4054)
LIEMIIIA_00207 1.5e-75
LIEMIIIA_00208 2.9e-45
LIEMIIIA_00209 8e-57
LIEMIIIA_00210 9.7e-153 Z012_02110 S Protein of unknown function (DUF3383)
LIEMIIIA_00211 4e-56
LIEMIIIA_00212 9e-27
LIEMIIIA_00214 0.0 3.4.14.13 M Phage tail tape measure protein TP901
LIEMIIIA_00215 1.2e-58 M LysM domain
LIEMIIIA_00216 2.1e-46
LIEMIIIA_00217 5.7e-104
LIEMIIIA_00218 1.2e-48
LIEMIIIA_00219 9.5e-33
LIEMIIIA_00220 1.7e-125 Z012_12235 S Baseplate J-like protein
LIEMIIIA_00221 1.1e-08
LIEMIIIA_00222 1.6e-36
LIEMIIIA_00228 7.1e-38
LIEMIIIA_00229 2.2e-19 S Phage uncharacterised protein (Phage_XkdX)
LIEMIIIA_00230 1.1e-07
LIEMIIIA_00232 7.9e-19
LIEMIIIA_00233 5e-29
LIEMIIIA_00234 2.1e-173 M Glycosyl hydrolases family 25
LIEMIIIA_00235 9.2e-14
LIEMIIIA_00236 3e-22 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
LIEMIIIA_00237 9.2e-89 ypmB S Protein conserved in bacteria
LIEMIIIA_00238 1.5e-260 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
LIEMIIIA_00239 1.3e-114 dnaD L DnaD domain protein
LIEMIIIA_00240 6.1e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LIEMIIIA_00241 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
LIEMIIIA_00242 4.5e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
LIEMIIIA_00243 1e-107 ypsA S Belongs to the UPF0398 family
LIEMIIIA_00244 1.1e-68 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
LIEMIIIA_00245 3.6e-218 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
LIEMIIIA_00246 1e-242 cpdA S Calcineurin-like phosphoesterase
LIEMIIIA_00247 3.4e-79
LIEMIIIA_00248 1.9e-115 rdgB 3.6.1.66, 5.1.1.3 F Ham1 family
LIEMIIIA_00249 9.9e-285 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
LIEMIIIA_00250 5.7e-43 2.4.1.33 V HlyD family secretion protein
LIEMIIIA_00252 1e-20 S Enterocin A Immunity
LIEMIIIA_00253 5.9e-45
LIEMIIIA_00254 3.7e-58 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
LIEMIIIA_00256 2.1e-45 S PFAM Archaeal ATPase
LIEMIIIA_00257 7.3e-74
LIEMIIIA_00258 0.0 kup P Transport of potassium into the cell
LIEMIIIA_00259 0.0 pepO 3.4.24.71 O Peptidase family M13
LIEMIIIA_00260 1.4e-210 yttB EGP Major facilitator Superfamily
LIEMIIIA_00261 2.3e-07 V ABC-type multidrug transport system, ATPase and permease components
LIEMIIIA_00262 6.2e-288 P ABC transporter
LIEMIIIA_00263 4.3e-36
LIEMIIIA_00265 6.9e-47 mdtG EGP Major facilitator Superfamily
LIEMIIIA_00266 1.7e-152 mdtG EGP Major facilitator Superfamily
LIEMIIIA_00267 1.3e-174
LIEMIIIA_00268 2.8e-47 lysM M LysM domain
LIEMIIIA_00269 0.0 pepN 3.4.11.2 E aminopeptidase
LIEMIIIA_00270 1.3e-250 dtpT U amino acid peptide transporter
LIEMIIIA_00271 1.2e-18 S Sugar efflux transporter for intercellular exchange
LIEMIIIA_00272 6.6e-70 XK27_02470 K LytTr DNA-binding domain
LIEMIIIA_00273 7.9e-92 liaI S membrane
LIEMIIIA_00274 4e-16
LIEMIIIA_00275 3.9e-186 S Putative peptidoglycan binding domain
LIEMIIIA_00276 1.9e-157 2.7.7.12 C Domain of unknown function (DUF4931)
LIEMIIIA_00277 9e-121
LIEMIIIA_00278 3.7e-263 V ABC-type multidrug transport system, ATPase and permease components
LIEMIIIA_00279 1.2e-250 yifK E Amino acid permease
LIEMIIIA_00280 1.3e-179 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LIEMIIIA_00281 1.5e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LIEMIIIA_00282 0.0 aha1 P E1-E2 ATPase
LIEMIIIA_00283 2.4e-175 F DNA/RNA non-specific endonuclease
LIEMIIIA_00284 5.9e-160 metQ2 P Belongs to the nlpA lipoprotein family
LIEMIIIA_00285 2.6e-189 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LIEMIIIA_00286 3.4e-73 metI P ABC transporter permease
LIEMIIIA_00287 9e-267 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
LIEMIIIA_00288 1.9e-261 frdC 1.3.5.4 C FAD binding domain
LIEMIIIA_00289 3.1e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
LIEMIIIA_00290 3.5e-252 pepC 3.4.22.40 E Peptidase C1-like family
LIEMIIIA_00291 1.3e-133 hxlA 6.2.1.3 H Aldolase/RraA
LIEMIIIA_00292 5.7e-272 P Sodium:sulfate symporter transmembrane region
LIEMIIIA_00293 4.9e-111 ybbL S ABC transporter, ATP-binding protein
LIEMIIIA_00294 2.5e-130 ybbM S Uncharacterised protein family (UPF0014)
LIEMIIIA_00295 8.8e-84 uspA T universal stress protein
LIEMIIIA_00297 1.2e-161 phnD P Phosphonate ABC transporter
LIEMIIIA_00298 3e-139 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
LIEMIIIA_00299 1.4e-120 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
LIEMIIIA_00300 1.3e-148 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
LIEMIIIA_00301 1.4e-81 L COG3385 FOG Transposase and inactivated derivatives
LIEMIIIA_00302 5.6e-183 K Transcriptional regulator
LIEMIIIA_00303 2.1e-171 ppaC 3.6.1.1 C inorganic pyrophosphatase
LIEMIIIA_00304 2.7e-111 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LIEMIIIA_00305 4e-57 K Helix-turn-helix domain
LIEMIIIA_00306 1.4e-98 L Helix-turn-helix domain
LIEMIIIA_00307 3.1e-150 xerD L Phage integrase, N-terminal SAM-like domain
LIEMIIIA_00308 3e-66 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LIEMIIIA_00309 1e-63 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LIEMIIIA_00310 5e-13 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
LIEMIIIA_00311 1.4e-115 mmuP E amino acid
LIEMIIIA_00312 1.4e-272 pepV 3.5.1.18 E dipeptidase PepV
LIEMIIIA_00313 6.3e-93 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
LIEMIIIA_00314 1.7e-284 E Amino acid permease
LIEMIIIA_00315 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
LIEMIIIA_00316 2.3e-245 ynbB 4.4.1.1 P aluminum resistance
LIEMIIIA_00317 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
LIEMIIIA_00318 2.3e-164 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
LIEMIIIA_00319 1.6e-294 L Nuclease-related domain
LIEMIIIA_00320 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
LIEMIIIA_00321 8.3e-106 S Repeat protein
LIEMIIIA_00322 3.9e-127 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
LIEMIIIA_00323 5.1e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
LIEMIIIA_00324 5.4e-56 XK27_04120 S Putative amino acid metabolism
LIEMIIIA_00325 3.2e-217 iscS 2.8.1.7 E Aminotransferase class V
LIEMIIIA_00326 1.2e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LIEMIIIA_00327 6.7e-37
LIEMIIIA_00328 2.8e-102 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
LIEMIIIA_00329 3.6e-31 cspA K 'Cold-shock' DNA-binding domain
LIEMIIIA_00330 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LIEMIIIA_00331 2.8e-74 gpsB D DivIVA domain protein
LIEMIIIA_00332 5.7e-149 ylmH S S4 domain protein
LIEMIIIA_00333 1.7e-45 yggT S YGGT family
LIEMIIIA_00334 7.3e-74 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
LIEMIIIA_00335 3.8e-206 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LIEMIIIA_00336 1.3e-246 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
LIEMIIIA_00337 4.5e-152 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
LIEMIIIA_00338 3.7e-207 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LIEMIIIA_00339 5e-262 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LIEMIIIA_00340 1.5e-175 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LIEMIIIA_00341 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
LIEMIIIA_00342 1.8e-54 ftsL D Cell division protein FtsL
LIEMIIIA_00343 7.2e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
LIEMIIIA_00344 6.3e-78 mraZ K Belongs to the MraZ family
LIEMIIIA_00345 6.4e-54 S Protein of unknown function (DUF3397)
LIEMIIIA_00347 2.7e-94 mreD
LIEMIIIA_00348 2e-147 mreC M Involved in formation and maintenance of cell shape
LIEMIIIA_00349 2.4e-176 mreB D cell shape determining protein MreB
LIEMIIIA_00350 2.3e-108 radC L DNA repair protein
LIEMIIIA_00351 5.7e-126 S Haloacid dehalogenase-like hydrolase
LIEMIIIA_00352 1.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
LIEMIIIA_00353 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
LIEMIIIA_00354 2.5e-52
LIEMIIIA_00355 1.1e-132 S AAA domain, putative AbiEii toxin, Type IV TA system
LIEMIIIA_00356 0.0 3.6.3.8 P P-type ATPase
LIEMIIIA_00358 6.5e-44
LIEMIIIA_00359 1.5e-94 S Protein of unknown function (DUF3990)
LIEMIIIA_00360 5.2e-170 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
LIEMIIIA_00361 3.5e-62 2.4.1.83 GT2 S GtrA-like protein
LIEMIIIA_00362 5.5e-44 3.6.4.12 S PD-(D/E)XK nuclease family transposase
LIEMIIIA_00363 3.2e-119 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
LIEMIIIA_00364 1.7e-184 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
LIEMIIIA_00365 2e-225 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LIEMIIIA_00366 1.4e-212 iscS2 2.8.1.7 E Aminotransferase class V
LIEMIIIA_00367 2.1e-294 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
LIEMIIIA_00368 1.4e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LIEMIIIA_00369 1.3e-84 yueI S Protein of unknown function (DUF1694)
LIEMIIIA_00370 2.2e-238 rarA L recombination factor protein RarA
LIEMIIIA_00371 8.4e-39
LIEMIIIA_00372 1.8e-78 usp6 T universal stress protein
LIEMIIIA_00373 4.7e-216 rodA D Belongs to the SEDS family
LIEMIIIA_00374 3.3e-33 S Protein of unknown function (DUF2969)
LIEMIIIA_00375 1e-50 yidD S Could be involved in insertion of integral membrane proteins into the membrane
LIEMIIIA_00376 1.2e-177 mbl D Cell shape determining protein MreB Mrl
LIEMIIIA_00377 5.1e-142 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
LIEMIIIA_00378 5.4e-175 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
LIEMIIIA_00379 2.2e-292 I Acyltransferase
LIEMIIIA_00380 1.7e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LIEMIIIA_00381 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
LIEMIIIA_00382 1.5e-230 XK27_04775 S PAS domain
LIEMIIIA_00383 1.3e-102 S Iron-sulfur cluster assembly protein
LIEMIIIA_00384 8.7e-141 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LIEMIIIA_00385 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
LIEMIIIA_00386 5.6e-255 yxbA 6.3.1.12 S ATP-grasp enzyme
LIEMIIIA_00387 0.0 asnB 6.3.5.4 E Asparagine synthase
LIEMIIIA_00388 1.3e-270 S Calcineurin-like phosphoesterase
LIEMIIIA_00389 3.9e-84
LIEMIIIA_00390 1.6e-105 tag 3.2.2.20 L glycosylase
LIEMIIIA_00391 4.5e-168 L COG3385 FOG Transposase and inactivated derivatives
LIEMIIIA_00394 3.4e-17 CO COG0526, thiol-disulfide isomerase and thioredoxins
LIEMIIIA_00397 9.4e-33 M Peptidase family M23
LIEMIIIA_00398 2.4e-159 trsE S COG0433 Predicted ATPase
LIEMIIIA_00399 8.4e-15
LIEMIIIA_00401 2.3e-32 I mechanosensitive ion channel activity
LIEMIIIA_00402 8.1e-87 U TraM recognition site of TraD and TraG
LIEMIIIA_00403 3.2e-19
LIEMIIIA_00405 3.2e-182 M Glycosyl hydrolases family 25
LIEMIIIA_00406 8e-27
LIEMIIIA_00407 7e-16
LIEMIIIA_00409 1.7e-16
LIEMIIIA_00411 1.2e-10
LIEMIIIA_00416 6.4e-70
LIEMIIIA_00417 3.4e-35
LIEMIIIA_00418 1.4e-09
LIEMIIIA_00419 7.4e-113 Z012_12235 S Baseplate J-like protein
LIEMIIIA_00420 2.8e-34
LIEMIIIA_00421 1.9e-102
LIEMIIIA_00422 2.7e-46
LIEMIIIA_00423 5e-59 M LysM domain
LIEMIIIA_00424 3.8e-220 3.4.14.13 M Phage tail tape measure protein TP901
LIEMIIIA_00426 2.9e-09
LIEMIIIA_00427 9.3e-29
LIEMIIIA_00428 3.5e-103 Z012_02110 S Protein of unknown function (DUF3383)
LIEMIIIA_00429 3.3e-31
LIEMIIIA_00430 1.6e-25
LIEMIIIA_00431 1.1e-28
LIEMIIIA_00432 1.6e-19 S Protein of unknown function (DUF4054)
LIEMIIIA_00433 2.4e-93 Z012_11565 S Uncharacterized protein conserved in bacteria (DUF2184)
LIEMIIIA_00434 4.1e-34
LIEMIIIA_00435 1.6e-57 S Uncharacterized protein conserved in bacteria (DUF2213)
LIEMIIIA_00436 5e-12 S Lysin motif
LIEMIIIA_00437 1.3e-47 S Phage Mu protein F like protein
LIEMIIIA_00438 6.2e-135 S Protein of unknown function (DUF1073)
LIEMIIIA_00439 9e-201 S Terminase-like family
LIEMIIIA_00440 3e-19 ps333 L Terminase small subunit
LIEMIIIA_00443 3.3e-09 arpU S Phage transcriptional regulator, ArpU family
LIEMIIIA_00446 3.8e-219 XK27_11280 S Psort location CytoplasmicMembrane, score
LIEMIIIA_00454 1.2e-100 L Helix-turn-helix domain
LIEMIIIA_00455 5.3e-131 S ERF superfamily
LIEMIIIA_00456 3.9e-127 S Protein of unknown function (DUF1351)
LIEMIIIA_00457 4.6e-45
LIEMIIIA_00459 5.5e-18
LIEMIIIA_00460 1.8e-31 S Helix-turn-helix domain
LIEMIIIA_00466 1.4e-85 S AntA/AntB antirepressor
LIEMIIIA_00468 3.7e-13
LIEMIIIA_00469 3.1e-12
LIEMIIIA_00470 3.7e-18 ps115 K sequence-specific DNA binding
LIEMIIIA_00471 4.7e-15 S Pfam:Peptidase_M78
LIEMIIIA_00472 1.2e-54 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
LIEMIIIA_00473 6.2e-12
LIEMIIIA_00474 3.7e-93 sip L Belongs to the 'phage' integrase family
LIEMIIIA_00475 4.3e-48 U TraM recognition site of TraD and TraG
LIEMIIIA_00479 1e-30 M domain protein
LIEMIIIA_00480 7.2e-15 S SLAP domain
LIEMIIIA_00481 7.4e-40 M domain protein
LIEMIIIA_00483 1.4e-24 srtA 3.4.22.70 M sortase family
LIEMIIIA_00484 2.3e-21 S SLAP domain
LIEMIIIA_00490 5.7e-11 S Single-strand binding protein family
LIEMIIIA_00501 1.7e-25 S Domain of unknown function (DUF771)
LIEMIIIA_00502 2e-32 K Helix-turn-helix domain
LIEMIIIA_00503 5.7e-16 K Helix-turn-helix XRE-family like proteins
LIEMIIIA_00504 3.4e-29 K Helix-turn-helix XRE-family like proteins
LIEMIIIA_00505 5e-08 S Pfam:DUF955
LIEMIIIA_00506 6.4e-111 L Belongs to the 'phage' integrase family
LIEMIIIA_00508 1.6e-131 I Carboxylesterase family
LIEMIIIA_00509 9.1e-54 papP P ABC transporter, permease protein
LIEMIIIA_00510 5.3e-116 P ABC transporter permease
LIEMIIIA_00511 1.5e-127 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
LIEMIIIA_00512 1e-156 cjaA ET ABC transporter substrate-binding protein
LIEMIIIA_00513 7.1e-200 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LIEMIIIA_00514 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LIEMIIIA_00515 2e-61 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LIEMIIIA_00516 4.3e-169 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
LIEMIIIA_00517 7.1e-158 metQ1 P Belongs to the nlpA lipoprotein family
LIEMIIIA_00518 1.9e-25
LIEMIIIA_00519 0.0 mco Q Multicopper oxidase
LIEMIIIA_00520 1.2e-151 S Sucrose-6F-phosphate phosphohydrolase
LIEMIIIA_00521 0.0 oppA E ABC transporter
LIEMIIIA_00522 8.4e-229 Q Imidazolonepropionase and related amidohydrolases
LIEMIIIA_00523 2.7e-246 3.5.1.47 S Peptidase dimerisation domain
LIEMIIIA_00524 1e-137 S Protein of unknown function (DUF3100)
LIEMIIIA_00525 9.7e-83 S An automated process has identified a potential problem with this gene model
LIEMIIIA_00526 1e-48 S Metal binding domain of Ada
LIEMIIIA_00527 0.0 mgtA 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
LIEMIIIA_00528 9e-137 lysR5 K LysR substrate binding domain
LIEMIIIA_00529 8.8e-234 arcA 3.5.3.6 E Arginine
LIEMIIIA_00530 4.3e-66 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LIEMIIIA_00531 2e-105 argF 2.1.3.3, 2.7.2.2 E Belongs to the carbamate kinase family
LIEMIIIA_00532 9.2e-95 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
LIEMIIIA_00533 2.3e-215 S Sterol carrier protein domain
LIEMIIIA_00534 1e-20
LIEMIIIA_00535 4.9e-108 K LysR substrate binding domain
LIEMIIIA_00536 9e-98
LIEMIIIA_00537 3e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
LIEMIIIA_00538 1.1e-56 S Protein of unknown function (DUF3290)
LIEMIIIA_00539 3e-116 yviA S Protein of unknown function (DUF421)
LIEMIIIA_00540 9e-158 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LIEMIIIA_00541 8e-182 dnaQ 2.7.7.7 L EXOIII
LIEMIIIA_00542 1.9e-158 endA F DNA RNA non-specific endonuclease
LIEMIIIA_00543 1.3e-281 pipD E Dipeptidase
LIEMIIIA_00544 1.9e-203 malK P ATPases associated with a variety of cellular activities
LIEMIIIA_00545 1.6e-157 gtsB P ABC-type sugar transport systems, permease components
LIEMIIIA_00546 6.1e-146 gtsC P Binding-protein-dependent transport system inner membrane component
LIEMIIIA_00547 9.2e-258 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
LIEMIIIA_00548 2.3e-240 G Bacterial extracellular solute-binding protein
LIEMIIIA_00549 1.8e-154 corA P CorA-like Mg2+ transporter protein
LIEMIIIA_00550 3.3e-148 3.5.2.6 V Beta-lactamase enzyme family
LIEMIIIA_00551 6.6e-99 yobS K Bacterial regulatory proteins, tetR family
LIEMIIIA_00552 0.0 ydgH S MMPL family
LIEMIIIA_00554 7.8e-26 K Acetyltransferase (GNAT) domain
LIEMIIIA_00555 1.8e-163
LIEMIIIA_00556 1.1e-34 S Protein of unknown function (DUF2508)
LIEMIIIA_00557 1.6e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LIEMIIIA_00558 2.8e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LIEMIIIA_00559 8.7e-84 2.4.1.58 GT8 M family 8
LIEMIIIA_00560 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LIEMIIIA_00561 6.4e-90 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
LIEMIIIA_00562 9e-26
LIEMIIIA_00563 1.3e-116 rsmC 2.1.1.172 J Methyltransferase
LIEMIIIA_00564 3.9e-140 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
LIEMIIIA_00565 4.1e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
LIEMIIIA_00566 7e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LIEMIIIA_00567 1.7e-12 GT2,GT4 M family 8
LIEMIIIA_00568 5.7e-18
LIEMIIIA_00569 1.5e-239 G Bacterial extracellular solute-binding protein
LIEMIIIA_00570 1e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
LIEMIIIA_00571 1.1e-236 XK27_01810 S Calcineurin-like phosphoesterase
LIEMIIIA_00573 0.0 S SLAP domain
LIEMIIIA_00574 0.0 hsdR 3.1.21.3 L DEAD/DEAH box helicase
LIEMIIIA_00575 1.2e-164 S AAA domain, putative AbiEii toxin, Type IV TA system
LIEMIIIA_00576 3.4e-42 S RloB-like protein
LIEMIIIA_00577 1.9e-259 hsdM 2.1.1.72 V type I restriction-modification system
LIEMIIIA_00578 5.7e-99 3.1.21.3 V Type I restriction modification DNA specificity domain
LIEMIIIA_00580 6.4e-243 cydA 1.10.3.14 C ubiquinol oxidase
LIEMIIIA_00581 8.2e-177 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
LIEMIIIA_00582 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
LIEMIIIA_00583 1.9e-269 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LIEMIIIA_00584 2.2e-128 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
LIEMIIIA_00585 1.4e-173 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
LIEMIIIA_00586 1.1e-161 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
LIEMIIIA_00587 2.4e-231 ndh 1.6.99.3 C NADH dehydrogenase
LIEMIIIA_00588 6.2e-43 1.3.5.4 C FAD binding domain
LIEMIIIA_00589 2.3e-84 3.6.4.12 S PD-(D/E)XK nuclease family transposase
LIEMIIIA_00590 2.8e-168 K LysR substrate binding domain
LIEMIIIA_00591 1.1e-121 3.6.1.27 I Acid phosphatase homologues
LIEMIIIA_00592 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
LIEMIIIA_00593 4.7e-275 ytgP S Polysaccharide biosynthesis protein
LIEMIIIA_00594 1.4e-191 oppA E ABC transporter, substratebinding protein
LIEMIIIA_00595 1.3e-30
LIEMIIIA_00596 1.2e-144 pstS P Phosphate
LIEMIIIA_00597 1.1e-159 pstC P probably responsible for the translocation of the substrate across the membrane
LIEMIIIA_00598 1.2e-152 pstA P Phosphate transport system permease protein PstA
LIEMIIIA_00599 3.9e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LIEMIIIA_00600 1.4e-105 phoU P Plays a role in the regulation of phosphate uptake
LIEMIIIA_00601 9.5e-121 T Transcriptional regulatory protein, C terminal
LIEMIIIA_00602 8.7e-139 S cog cog1373
LIEMIIIA_00603 9.7e-146 S haloacid dehalogenase-like hydrolase
LIEMIIIA_00604 2.5e-226 pbuG S permease
LIEMIIIA_00605 1.9e-259 emrY EGP Major facilitator Superfamily
LIEMIIIA_00606 2e-91 yxdD K Bacterial regulatory proteins, tetR family
LIEMIIIA_00607 0.0 4.2.1.53 S Myosin-crossreactive antigen
LIEMIIIA_00608 5.5e-148 S cog cog1373
LIEMIIIA_00609 3.4e-27
LIEMIIIA_00610 8e-22 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
LIEMIIIA_00611 5.4e-53 hipB K sequence-specific DNA binding
LIEMIIIA_00612 4.8e-42 S SnoaL-like domain
LIEMIIIA_00613 0.0 L PLD-like domain
LIEMIIIA_00614 1.4e-31 O OsmC-like protein
LIEMIIIA_00616 1.5e-36 oppA E ABC transporter substrate-binding protein
LIEMIIIA_00617 9.9e-42 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
LIEMIIIA_00618 1.7e-204 csaB M Glycosyl transferases group 1
LIEMIIIA_00619 2.4e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LIEMIIIA_00620 1.2e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
LIEMIIIA_00621 1.4e-204 tnpB L Putative transposase DNA-binding domain
LIEMIIIA_00622 0.0 pacL 3.6.3.8 P P-type ATPase
LIEMIIIA_00623 7e-225 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
LIEMIIIA_00624 3e-257 epsU S Polysaccharide biosynthesis protein
LIEMIIIA_00625 7.7e-134 M Glycosyltransferase sugar-binding region containing DXD motif
LIEMIIIA_00626 4.1e-83 ydcK S Belongs to the SprT family
LIEMIIIA_00628 5.2e-84 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
LIEMIIIA_00629 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
LIEMIIIA_00630 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LIEMIIIA_00631 5.8e-203 camS S sex pheromone
LIEMIIIA_00632 1.5e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LIEMIIIA_00633 2.9e-268 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
LIEMIIIA_00634 2.7e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LIEMIIIA_00635 2.7e-171 yegS 2.7.1.107 G Lipid kinase
LIEMIIIA_00636 4.3e-108 ybhL S Belongs to the BI1 family
LIEMIIIA_00637 2.6e-57
LIEMIIIA_00638 1.4e-147 I transferase activity, transferring acyl groups other than amino-acyl groups
LIEMIIIA_00639 2.8e-244 nhaC C Na H antiporter NhaC
LIEMIIIA_00640 6.3e-201 pbpX V Beta-lactamase
LIEMIIIA_00641 4.9e-254 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LIEMIIIA_00642 1.1e-94 MA20_25245 K Acetyltransferase (GNAT) domain
LIEMIIIA_00645 8.5e-133 cobB K SIR2 family
LIEMIIIA_00646 2.5e-86 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
LIEMIIIA_00647 1.3e-124 terC P Integral membrane protein TerC family
LIEMIIIA_00648 5.8e-64 yeaO S Protein of unknown function, DUF488
LIEMIIIA_00649 8.9e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
LIEMIIIA_00650 1.3e-290 glnP P ABC transporter permease
LIEMIIIA_00651 3.4e-135 glnQ E ABC transporter, ATP-binding protein
LIEMIIIA_00652 7.3e-148 S Protein of unknown function (DUF805)
LIEMIIIA_00653 6.4e-159 L HNH nucleases
LIEMIIIA_00654 1e-119 yfbR S HD containing hydrolase-like enzyme
LIEMIIIA_00655 4e-177 G Glycosyl hydrolases family 8
LIEMIIIA_00656 4.5e-189 ydaM M Glycosyl transferase
LIEMIIIA_00657 1.1e-07 S Uncharacterised protein family (UPF0236)
LIEMIIIA_00658 1.2e-17
LIEMIIIA_00659 1.9e-309 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
LIEMIIIA_00660 2e-70 S Iron-sulphur cluster biosynthesis
LIEMIIIA_00661 1.6e-189 ybiR P Citrate transporter
LIEMIIIA_00662 5.1e-96 lemA S LemA family
LIEMIIIA_00663 8.3e-157 htpX O Belongs to the peptidase M48B family
LIEMIIIA_00664 7.9e-174 K helix_turn_helix, arabinose operon control protein
LIEMIIIA_00665 4.8e-249 cbiO1 S ABC transporter, ATP-binding protein
LIEMIIIA_00666 2.8e-77 P Cobalt transport protein
LIEMIIIA_00667 1.8e-175 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
LIEMIIIA_00668 3.2e-90 G Peptidase_C39 like family
LIEMIIIA_00669 2.8e-162 M NlpC/P60 family
LIEMIIIA_00670 8.4e-25 G Peptidase_C39 like family
LIEMIIIA_00671 1.4e-184 5.3.3.2 C FMN-dependent dehydrogenase
LIEMIIIA_00672 1.3e-141 yfeO P Voltage gated chloride channel
LIEMIIIA_00673 2e-68 sptS 2.7.13.3 T Histidine kinase
LIEMIIIA_00674 2.6e-103 sptS 2.7.13.3 T Histidine kinase
LIEMIIIA_00675 1.4e-207 EGP Major facilitator Superfamily
LIEMIIIA_00676 2.3e-69 O OsmC-like protein
LIEMIIIA_00677 2.2e-85 S Protein of unknown function (DUF805)
LIEMIIIA_00678 2.5e-71
LIEMIIIA_00679 3.1e-93
LIEMIIIA_00680 9.9e-180
LIEMIIIA_00681 5.8e-83 S Fic/DOC family
LIEMIIIA_00682 3.3e-275 yjeM E Amino Acid
LIEMIIIA_00683 1.1e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LIEMIIIA_00684 4.7e-26 K FCD
LIEMIIIA_00685 1.6e-60 clcA P chloride
LIEMIIIA_00686 8.8e-41 clcA P chloride
LIEMIIIA_00687 9.7e-25 I Carboxylesterase family
LIEMIIIA_00688 1.5e-64 arsC 1.20.4.1 P Belongs to the ArsC family
LIEMIIIA_00689 2.9e-277 V ABC-type multidrug transport system, ATPase and permease components
LIEMIIIA_00690 4.5e-291 V ABC-type multidrug transport system, ATPase and permease components
LIEMIIIA_00691 1.7e-148 S haloacid dehalogenase-like hydrolase
LIEMIIIA_00692 7e-50
LIEMIIIA_00693 1.9e-37
LIEMIIIA_00694 1.2e-63 S Alpha beta hydrolase
LIEMIIIA_00695 1e-23 S Alpha beta hydrolase
LIEMIIIA_00696 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
LIEMIIIA_00697 1.3e-122 sdaAB 4.3.1.17 E Serine dehydratase beta chain
LIEMIIIA_00698 3.8e-154 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
LIEMIIIA_00699 9.7e-52 S Iron-sulfur cluster assembly protein
LIEMIIIA_00700 6.9e-116 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
LIEMIIIA_00701 2.5e-47 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
LIEMIIIA_00702 3.7e-243 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
LIEMIIIA_00703 2.2e-142 S Belongs to the UPF0246 family
LIEMIIIA_00704 4.1e-141 aroD S Alpha/beta hydrolase family
LIEMIIIA_00706 1.2e-134 EGP Major facilitator Superfamily
LIEMIIIA_00707 4e-150 3.1.3.102, 3.1.3.104 S haloacid dehalogenase-like hydrolase
LIEMIIIA_00708 0.0 tetP J elongation factor G
LIEMIIIA_00709 3.5e-160 yvgN C Aldo keto reductase
LIEMIIIA_00710 2e-155 P CorA-like Mg2+ transporter protein
LIEMIIIA_00711 5.6e-132 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
LIEMIIIA_00712 4.9e-174 ABC-SBP S ABC transporter
LIEMIIIA_00713 5.6e-121 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
LIEMIIIA_00714 2.4e-136 XK27_08845 S ABC transporter, ATP-binding protein
LIEMIIIA_00715 5.2e-248 G Major Facilitator
LIEMIIIA_00716 4.1e-18
LIEMIIIA_00717 2.6e-103 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
LIEMIIIA_00718 1.4e-176 K AI-2E family transporter
LIEMIIIA_00719 8.6e-97 oppA E ABC transporter substrate-binding protein
LIEMIIIA_00720 1.2e-232 oppA E ABC transporter substrate-binding protein
LIEMIIIA_00721 2e-116 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
LIEMIIIA_00722 7.2e-29 3.2.1.4, 3.2.1.78, 3.2.1.8 GH26,GH5,GH9 S regulation of response to stimulus
LIEMIIIA_00723 9.6e-28 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
LIEMIIIA_00725 2.6e-146 S Putative ABC-transporter type IV
LIEMIIIA_00726 1.7e-07 S LPXTG cell wall anchor motif
LIEMIIIA_00727 1.5e-42 ybaT E Amino acid permease
LIEMIIIA_00728 2e-44 ybaT E Amino acid permease
LIEMIIIA_00730 7.6e-26 WQ51_00220 K Helix-turn-helix XRE-family like proteins
LIEMIIIA_00731 1.4e-22 S CAAX protease self-immunity
LIEMIIIA_00732 1.5e-25 S CAAX protease self-immunity
LIEMIIIA_00733 2.5e-75 K Helix-turn-helix domain
LIEMIIIA_00734 1.1e-110 K Helix-turn-helix XRE-family like proteins
LIEMIIIA_00737 8.8e-29
LIEMIIIA_00738 7.5e-183 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
LIEMIIIA_00739 6.8e-116 dedA S SNARE-like domain protein
LIEMIIIA_00740 3.7e-100 S Protein of unknown function (DUF1461)
LIEMIIIA_00741 3.4e-143 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
LIEMIIIA_00742 2.1e-92 yutD S Protein of unknown function (DUF1027)
LIEMIIIA_00743 5.8e-274 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
LIEMIIIA_00744 4.3e-55
LIEMIIIA_00745 2.3e-267 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
LIEMIIIA_00746 3.2e-181 ccpA K catabolite control protein A
LIEMIIIA_00747 7e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
LIEMIIIA_00748 1.3e-36
LIEMIIIA_00749 9.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
LIEMIIIA_00750 3.7e-146 ykuT M mechanosensitive ion channel
LIEMIIIA_00751 6.9e-100 V ATPases associated with a variety of cellular activities
LIEMIIIA_00752 1.7e-139
LIEMIIIA_00753 5.4e-113
LIEMIIIA_00754 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
LIEMIIIA_00755 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LIEMIIIA_00756 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LIEMIIIA_00757 8.1e-120 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
LIEMIIIA_00758 7.8e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LIEMIIIA_00759 2.7e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
LIEMIIIA_00760 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LIEMIIIA_00761 3.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
LIEMIIIA_00762 9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LIEMIIIA_00763 2.1e-106 rplD J Forms part of the polypeptide exit tunnel
LIEMIIIA_00764 3.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
LIEMIIIA_00765 7.3e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LIEMIIIA_00766 1.1e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LIEMIIIA_00767 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LIEMIIIA_00768 2.7e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LIEMIIIA_00769 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LIEMIIIA_00770 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
LIEMIIIA_00771 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LIEMIIIA_00772 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LIEMIIIA_00773 3.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LIEMIIIA_00774 5.5e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LIEMIIIA_00775 6.8e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LIEMIIIA_00776 3.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LIEMIIIA_00777 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LIEMIIIA_00778 3.6e-55 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LIEMIIIA_00779 4.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LIEMIIIA_00780 2.3e-24 rpmD J Ribosomal protein L30
LIEMIIIA_00781 2.6e-71 rplO J Binds to the 23S rRNA
LIEMIIIA_00782 1.4e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
LIEMIIIA_00783 3.5e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
LIEMIIIA_00784 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LIEMIIIA_00785 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
LIEMIIIA_00786 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LIEMIIIA_00787 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LIEMIIIA_00788 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LIEMIIIA_00789 1.4e-60 rplQ J Ribosomal protein L17
LIEMIIIA_00790 3.7e-154 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LIEMIIIA_00791 1e-156 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LIEMIIIA_00792 7.2e-136 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LIEMIIIA_00793 8.4e-145 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
LIEMIIIA_00794 5.9e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LIEMIIIA_00795 5.1e-66 rpsI J Belongs to the universal ribosomal protein uS9 family
LIEMIIIA_00796 8.9e-133 L Phage integrase family
LIEMIIIA_00797 3e-24
LIEMIIIA_00798 1.5e-152
LIEMIIIA_00799 1.1e-152 ydjP I Alpha/beta hydrolase family
LIEMIIIA_00800 6.9e-195 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
LIEMIIIA_00801 1.2e-43 citD C Covalent carrier of the coenzyme of citrate lyase
LIEMIIIA_00802 2.4e-167 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
LIEMIIIA_00803 2.1e-288 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
LIEMIIIA_00804 9.3e-72 yeaL S Protein of unknown function (DUF441)
LIEMIIIA_00805 3.5e-21
LIEMIIIA_00806 3.6e-146 cbiQ P cobalt transport
LIEMIIIA_00807 0.0 ykoD P ABC transporter, ATP-binding protein
LIEMIIIA_00808 1.5e-95 S UPF0397 protein
LIEMIIIA_00809 2.9e-66 S Domain of unknown function DUF1828
LIEMIIIA_00810 5.5e-09
LIEMIIIA_00811 1.5e-50
LIEMIIIA_00812 2.6e-177 citR K Putative sugar-binding domain
LIEMIIIA_00813 6.5e-249 yjjP S Putative threonine/serine exporter
LIEMIIIA_00814 4.4e-172 S Domain of unknown function (DUF389)
LIEMIIIA_00815 6e-86
LIEMIIIA_00816 5.9e-68 S Protein of unknown function (DUF3021)
LIEMIIIA_00817 2.5e-140 V ABC transporter
LIEMIIIA_00818 2e-106 S domain protein
LIEMIIIA_00819 8.6e-199 tnpB L Putative transposase DNA-binding domain
LIEMIIIA_00820 1.1e-152 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LIEMIIIA_00821 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LIEMIIIA_00822 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
LIEMIIIA_00823 3.2e-72 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LIEMIIIA_00824 2.7e-36 yyaR K Acetyltransferase (GNAT) domain
LIEMIIIA_00825 3.1e-71 2.5.1.74 H UbiA prenyltransferase family
LIEMIIIA_00826 7.7e-26
LIEMIIIA_00827 5.7e-84 S PFAM Archaeal ATPase
LIEMIIIA_00828 2.2e-85 S PFAM Archaeal ATPase
LIEMIIIA_00829 2.8e-216 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LIEMIIIA_00830 4.8e-34 S reductase
LIEMIIIA_00831 4.4e-39 S reductase
LIEMIIIA_00832 2.7e-32 S reductase
LIEMIIIA_00833 6.4e-148 yxeH S hydrolase
LIEMIIIA_00834 8.2e-230 pbuG S permease
LIEMIIIA_00835 8.2e-140 cof S haloacid dehalogenase-like hydrolase
LIEMIIIA_00836 9.4e-72
LIEMIIIA_00837 9.3e-124 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
LIEMIIIA_00838 8.5e-119 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
LIEMIIIA_00839 2.1e-134 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
LIEMIIIA_00840 7e-87 gtcA S Teichoic acid glycosylation protein
LIEMIIIA_00841 4.1e-80 fld C Flavodoxin
LIEMIIIA_00842 1.4e-163 map 3.4.11.18 E Methionine Aminopeptidase
LIEMIIIA_00843 3.6e-163 yihY S Belongs to the UPF0761 family
LIEMIIIA_00844 2.1e-168 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
LIEMIIIA_00845 2.5e-214 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
LIEMIIIA_00846 3.6e-215 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
LIEMIIIA_00847 2.7e-268 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
LIEMIIIA_00848 5.3e-136 glvR K Helix-turn-helix domain, rpiR family
LIEMIIIA_00849 9.4e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
LIEMIIIA_00850 5.9e-09
LIEMIIIA_00851 4.4e-43
LIEMIIIA_00852 8.7e-66 2.7.1.191 G PTS system fructose IIA component
LIEMIIIA_00853 0.0 3.6.3.8 P P-type ATPase
LIEMIIIA_00854 4.9e-125
LIEMIIIA_00855 1.2e-241 S response to antibiotic
LIEMIIIA_00856 6.2e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LIEMIIIA_00857 6.4e-251 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LIEMIIIA_00858 7.7e-188 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
LIEMIIIA_00859 2e-239 L transposase, IS605 OrfB family
LIEMIIIA_00860 2.1e-28 S Peptidase propeptide and YPEB domain
LIEMIIIA_00861 2.4e-60 ypaA S Protein of unknown function (DUF1304)
LIEMIIIA_00862 2.3e-309 oppA3 E ABC transporter, substratebinding protein
LIEMIIIA_00863 1.1e-286 clcA P chloride
LIEMIIIA_00864 4e-32 E Zn peptidase
LIEMIIIA_00865 3.7e-58 ps115 K Helix-turn-helix XRE-family like proteins
LIEMIIIA_00866 1.2e-44
LIEMIIIA_00867 9.1e-106 S Bacteriocin helveticin-J
LIEMIIIA_00868 1.3e-117 S SLAP domain
LIEMIIIA_00869 3.5e-136 S SLAP domain
LIEMIIIA_00870 8e-210
LIEMIIIA_00871 1.2e-18
LIEMIIIA_00872 7.3e-175 EGP Sugar (and other) transporter
LIEMIIIA_00873 3.6e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LIEMIIIA_00874 2e-52 yaaQ S Cyclic-di-AMP receptor
LIEMIIIA_00875 6.3e-154 holB 2.7.7.7 L DNA polymerase III
LIEMIIIA_00876 1.8e-59 yabA L Involved in initiation control of chromosome replication
LIEMIIIA_00877 5.1e-156 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LIEMIIIA_00878 1.4e-130 fat 3.1.2.21 I Acyl-ACP thioesterase
LIEMIIIA_00879 2.2e-85 S ECF transporter, substrate-specific component
LIEMIIIA_00880 2.4e-133 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
LIEMIIIA_00881 7.4e-97 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
LIEMIIIA_00882 4.5e-194 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LIEMIIIA_00883 1.9e-245 L Transposase IS66 family
LIEMIIIA_00884 8.7e-34 S Transposase C of IS166 homeodomain
LIEMIIIA_00885 9.3e-64 L PFAM IS66 Orf2 family protein
LIEMIIIA_00886 7.7e-22
LIEMIIIA_00887 7e-43 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
LIEMIIIA_00888 6.6e-182 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
LIEMIIIA_00889 8.5e-283 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
LIEMIIIA_00890 0.0 uup S ABC transporter, ATP-binding protein
LIEMIIIA_00891 5.8e-112 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
LIEMIIIA_00893 3.2e-139 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LIEMIIIA_00894 8.7e-86 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
LIEMIIIA_00895 8.3e-210 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
LIEMIIIA_00896 1.1e-146 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
LIEMIIIA_00897 8.9e-187 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
LIEMIIIA_00898 2.3e-198 oppD P Belongs to the ABC transporter superfamily
LIEMIIIA_00899 1.9e-175 oppF P Belongs to the ABC transporter superfamily
LIEMIIIA_00900 5.2e-256 pepC 3.4.22.40 E aminopeptidase
LIEMIIIA_00901 2.9e-67 hsp O Belongs to the small heat shock protein (HSP20) family
LIEMIIIA_00902 7.5e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LIEMIIIA_00903 7.9e-112
LIEMIIIA_00905 1.2e-111 E Belongs to the SOS response-associated peptidase family
LIEMIIIA_00906 3.7e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
LIEMIIIA_00907 1.8e-89 comEB 3.5.4.12 F MafB19-like deaminase
LIEMIIIA_00908 2e-103 S TPM domain
LIEMIIIA_00909 1.5e-132 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
LIEMIIIA_00910 1e-307 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
LIEMIIIA_00911 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LIEMIIIA_00912 1e-147 tatD L hydrolase, TatD family
LIEMIIIA_00913 1e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LIEMIIIA_00914 3e-151 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
LIEMIIIA_00915 4.5e-39 veg S Biofilm formation stimulator VEG
LIEMIIIA_00916 1.1e-147 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
LIEMIIIA_00917 1.3e-172 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LIEMIIIA_00918 3.1e-48 S Domain of unknown function (DUF4811)
LIEMIIIA_00919 2.4e-262 lmrB EGP Major facilitator Superfamily
LIEMIIIA_00920 4.2e-77 K MerR HTH family regulatory protein
LIEMIIIA_00921 3.1e-139 S Cysteine-rich secretory protein family
LIEMIIIA_00922 4.6e-274 ycaM E amino acid
LIEMIIIA_00923 2.8e-290
LIEMIIIA_00925 2.6e-189 cggR K Putative sugar-binding domain
LIEMIIIA_00926 6.5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
LIEMIIIA_00927 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
LIEMIIIA_00928 1.7e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
LIEMIIIA_00929 6e-199 L COG2826 Transposase and inactivated derivatives, IS30 family
LIEMIIIA_00930 1.2e-94
LIEMIIIA_00931 3.4e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
LIEMIIIA_00932 9.7e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LIEMIIIA_00933 4.1e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
LIEMIIIA_00934 7e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
LIEMIIIA_00935 4e-98 dnaQ 2.7.7.7 L DNA polymerase III
LIEMIIIA_00936 2e-163 murB 1.3.1.98 M Cell wall formation
LIEMIIIA_00937 1.8e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
LIEMIIIA_00938 1.3e-129 potB P ABC transporter permease
LIEMIIIA_00939 4.8e-127 potC P ABC transporter permease
LIEMIIIA_00940 7.3e-208 potD P ABC transporter
LIEMIIIA_00941 6.4e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
LIEMIIIA_00942 2e-172 ybbR S YbbR-like protein
LIEMIIIA_00943 3.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LIEMIIIA_00944 1.4e-147 S hydrolase
LIEMIIIA_00945 1.8e-75 K Penicillinase repressor
LIEMIIIA_00946 1.6e-118
LIEMIIIA_00947 7.4e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LIEMIIIA_00948 3.8e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
LIEMIIIA_00949 7e-142 licT K CAT RNA binding domain
LIEMIIIA_00950 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
LIEMIIIA_00951 1e-297 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LIEMIIIA_00952 1e-149 D Alpha beta
LIEMIIIA_00953 1.2e-92 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
LIEMIIIA_00954 3.7e-26 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
LIEMIIIA_00955 5.2e-112 ica2 GT2 M Glycosyl transferase family group 2
LIEMIIIA_00956 8.2e-36
LIEMIIIA_00957 2.2e-90 2.7.7.65 T GGDEF domain
LIEMIIIA_00958 8.8e-82 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LIEMIIIA_00960 2e-310 E Amino acid permease
LIEMIIIA_00961 5.8e-100 L Helix-turn-helix domain
LIEMIIIA_00962 1.3e-160 L hmm pf00665
LIEMIIIA_00964 3.7e-27 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LIEMIIIA_00965 3.5e-101 ylbE GM NAD(P)H-binding
LIEMIIIA_00966 7.6e-94 S VanZ like family
LIEMIIIA_00967 8.9e-133 yebC K Transcriptional regulatory protein
LIEMIIIA_00968 4.9e-179 comGA NU Type II IV secretion system protein
LIEMIIIA_00969 1.7e-171 comGB NU type II secretion system
LIEMIIIA_00970 3.1e-43 comGC U competence protein ComGC
LIEMIIIA_00971 1.8e-69
LIEMIIIA_00972 2.3e-41
LIEMIIIA_00973 3.8e-77 comGF U Putative Competence protein ComGF
LIEMIIIA_00974 1.6e-21
LIEMIIIA_00975 1.9e-186 ytxK 2.1.1.72 L N-6 DNA Methylase
LIEMIIIA_00976 6.3e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LIEMIIIA_00978 2.5e-89 M Protein of unknown function (DUF3737)
LIEMIIIA_00979 9.9e-227 patB 4.4.1.8 E Aminotransferase, class I
LIEMIIIA_00980 1.6e-190 manA 5.3.1.8 G mannose-6-phosphate isomerase
LIEMIIIA_00981 7.7e-67 S SdpI/YhfL protein family
LIEMIIIA_00982 2.9e-128 K Transcriptional regulatory protein, C terminal
LIEMIIIA_00983 7.2e-267 yclK 2.7.13.3, 4.6.1.1 T Histidine kinase
LIEMIIIA_00984 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
LIEMIIIA_00985 3.8e-105 vanZ V VanZ like family
LIEMIIIA_00986 3.2e-253 pgi 5.3.1.9 G Belongs to the GPI family
LIEMIIIA_00987 3.8e-217 EGP Major facilitator Superfamily
LIEMIIIA_00988 3.9e-195 ampC V Beta-lactamase
LIEMIIIA_00991 1.7e-262 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
LIEMIIIA_00992 1.3e-113 tdk 2.7.1.21 F thymidine kinase
LIEMIIIA_00993 3.1e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LIEMIIIA_00994 7.3e-155 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
LIEMIIIA_00995 3.7e-190 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
LIEMIIIA_00996 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LIEMIIIA_00997 3.8e-128 atpB C it plays a direct role in the translocation of protons across the membrane
LIEMIIIA_00998 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LIEMIIIA_00999 3.4e-46 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LIEMIIIA_01000 2.8e-91 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LIEMIIIA_01001 2.8e-282 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LIEMIIIA_01002 2e-172 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LIEMIIIA_01003 3.3e-240 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LIEMIIIA_01004 9e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
LIEMIIIA_01005 9e-20 ywzB S Protein of unknown function (DUF1146)
LIEMIIIA_01006 1.2e-51 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
LIEMIIIA_01007 6.4e-113 S SLAP domain
LIEMIIIA_01008 8.4e-89
LIEMIIIA_01009 3e-09 isdH M Iron Transport-associated domain
LIEMIIIA_01010 6.3e-123 M Iron Transport-associated domain
LIEMIIIA_01011 8.7e-159 isdE P Periplasmic binding protein
LIEMIIIA_01012 9.5e-148 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LIEMIIIA_01013 6.7e-139 fhuC 3.6.3.34 HP abc transporter atp-binding protein
LIEMIIIA_01014 6.7e-44 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
LIEMIIIA_01015 3.4e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
LIEMIIIA_01016 1.3e-38 S RelB antitoxin
LIEMIIIA_01017 5.2e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
LIEMIIIA_01018 0.0 S membrane
LIEMIIIA_01019 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
LIEMIIIA_01020 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
LIEMIIIA_01021 2.1e-97 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LIEMIIIA_01022 3.1e-119 gluP 3.4.21.105 S Rhomboid family
LIEMIIIA_01023 9.7e-36 yqgQ S Bacterial protein of unknown function (DUF910)
LIEMIIIA_01024 1.5e-65 yqhL P Rhodanese-like protein
LIEMIIIA_01025 1e-168 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LIEMIIIA_01026 7.8e-222 ynbB 4.4.1.1 P aluminum resistance
LIEMIIIA_01027 2e-263 glnA 6.3.1.2 E glutamine synthetase
LIEMIIIA_01028 1.5e-169
LIEMIIIA_01029 1.7e-147
LIEMIIIA_01030 1.9e-21
LIEMIIIA_01033 2.7e-34
LIEMIIIA_01034 1.2e-128 S interspecies interaction between organisms
LIEMIIIA_01036 9.1e-10 K peptidyl-tyrosine sulfation
LIEMIIIA_01037 7.1e-263 E ABC transporter, substratebinding protein
LIEMIIIA_01038 3.7e-66 K Helix-turn-helix domain, rpiR family
LIEMIIIA_01039 2.9e-122 nanA 4.1.3.3, 4.3.3.7 EM Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
LIEMIIIA_01040 8.4e-90 nanK GK ROK family
LIEMIIIA_01041 2.3e-56 G Xylose isomerase domain protein TIM barrel
LIEMIIIA_01042 1.9e-121 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
LIEMIIIA_01043 1e-220 nanT E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LIEMIIIA_01044 1.1e-59 axe1 3.1.1.41 Q Acetyl xylan esterase (AXE1)
LIEMIIIA_01045 1.7e-36 axe1 3.1.1.41 Q Acetyl xylan esterase (AXE1)
LIEMIIIA_01046 2.9e-109 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
LIEMIIIA_01047 7.7e-10 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
LIEMIIIA_01048 3.6e-88 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
LIEMIIIA_01049 4.2e-84 yqeG S HAD phosphatase, family IIIA
LIEMIIIA_01050 4.4e-200 yqeH S Ribosome biogenesis GTPase YqeH
LIEMIIIA_01051 4.4e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LIEMIIIA_01052 6.6e-110 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
LIEMIIIA_01053 5.3e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
LIEMIIIA_01054 4.6e-216 ylbM S Belongs to the UPF0348 family
LIEMIIIA_01055 4.7e-97 yceD S Uncharacterized ACR, COG1399
LIEMIIIA_01056 1.2e-126 K response regulator
LIEMIIIA_01057 1.3e-277 arlS 2.7.13.3 T Histidine kinase
LIEMIIIA_01058 1e-12
LIEMIIIA_01059 1.5e-97 S CAAX protease self-immunity
LIEMIIIA_01060 6.1e-224 S SLAP domain
LIEMIIIA_01061 5.7e-83 S Aminoacyl-tRNA editing domain
LIEMIIIA_01062 2.4e-162 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LIEMIIIA_01063 2.9e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
LIEMIIIA_01064 2.2e-134 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LIEMIIIA_01065 4.5e-58 yodB K Transcriptional regulator, HxlR family
LIEMIIIA_01067 8.3e-24 papP P ABC transporter, permease protein
LIEMIIIA_01068 3.3e-61 3.6.1.55 F NUDIX domain
LIEMIIIA_01069 1e-79 S AAA domain
LIEMIIIA_01070 2.9e-117 fbiB 6.3.2.12, 6.3.2.17, 6.3.2.31, 6.3.2.34 S F420-0:Gamma-glutamyl ligase
LIEMIIIA_01071 1e-288 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
LIEMIIIA_01072 1.2e-100 treR K UTRA
LIEMIIIA_01073 3.3e-283 treB G phosphotransferase system
LIEMIIIA_01074 8.2e-64 spxA_2 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
LIEMIIIA_01075 1.9e-191 yrvN L AAA C-terminal domain
LIEMIIIA_01076 2.2e-251 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
LIEMIIIA_01077 1.4e-126 pgm3 G Phosphoglycerate mutase family
LIEMIIIA_01078 5.6e-118 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
LIEMIIIA_01079 0.0 helD 3.6.4.12 L DNA helicase
LIEMIIIA_01080 1.5e-107 glnP P ABC transporter permease
LIEMIIIA_01081 1e-105 glnQ 3.6.3.21 E ABC transporter
LIEMIIIA_01082 1.6e-143 aatB ET ABC transporter substrate-binding protein
LIEMIIIA_01083 7.5e-74 yjcF S Acetyltransferase (GNAT) domain
LIEMIIIA_01084 7.1e-98 E GDSL-like Lipase/Acylhydrolase
LIEMIIIA_01085 2.5e-169 coaA 2.7.1.33 F Pantothenic acid kinase
LIEMIIIA_01086 1.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LIEMIIIA_01087 8.8e-58 S Peptidase propeptide and YPEB domain
LIEMIIIA_01088 4.8e-28
LIEMIIIA_01091 4.3e-67 K Helix-turn-helix XRE-family like proteins
LIEMIIIA_01092 3.3e-147 malG P ABC transporter permease
LIEMIIIA_01093 1.1e-250 malF P Binding-protein-dependent transport system inner membrane component
LIEMIIIA_01094 5e-213 malE G Bacterial extracellular solute-binding protein
LIEMIIIA_01095 6.8e-209 msmX P Belongs to the ABC transporter superfamily
LIEMIIIA_01096 9e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
LIEMIIIA_01097 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
LIEMIIIA_01098 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
LIEMIIIA_01099 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
LIEMIIIA_01100 0.0 fhaB M Rib/alpha-like repeat
LIEMIIIA_01101 6.3e-123 L transposase, IS605 OrfB family
LIEMIIIA_01102 6.1e-136 V ABC transporter transmembrane region
LIEMIIIA_01103 1.7e-184 G Transmembrane secretion effector
LIEMIIIA_01104 1.5e-144 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
LIEMIIIA_01105 5.1e-292 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LIEMIIIA_01106 4.1e-101 ptp2 3.1.3.48 T Tyrosine phosphatase family
LIEMIIIA_01107 7.8e-10 3.6.3.2, 3.6.3.6 P cation transport ATPase
LIEMIIIA_01108 4.4e-35 3.6.3.2, 3.6.3.6 P cation transport ATPase
LIEMIIIA_01109 2.5e-264 3.6.3.6 P Cation transporter/ATPase, N-terminus
LIEMIIIA_01110 1.9e-19
LIEMIIIA_01111 3.9e-31 S Domain of unknown function DUF1829
LIEMIIIA_01112 1.1e-265
LIEMIIIA_01113 1.9e-72 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
LIEMIIIA_01114 4.3e-153 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
LIEMIIIA_01115 3.9e-25
LIEMIIIA_01116 8.3e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
LIEMIIIA_01117 5.7e-135 ecsA V ABC transporter, ATP-binding protein
LIEMIIIA_01118 6.5e-221 ecsB U ABC transporter
LIEMIIIA_01119 3.3e-126 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
LIEMIIIA_01121 2.8e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
LIEMIIIA_01122 1.4e-122 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LIEMIIIA_01123 9.7e-247 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
LIEMIIIA_01124 6.9e-218 mepA V MATE efflux family protein
LIEMIIIA_01125 1.8e-176 S SLAP domain
LIEMIIIA_01126 4.4e-283 M Peptidase family M1 domain
LIEMIIIA_01127 4.5e-188 S Bacteriocin helveticin-J
LIEMIIIA_01128 8e-51 L RelB antitoxin
LIEMIIIA_01129 7.4e-105 qmcA O prohibitin homologues
LIEMIIIA_01130 3.5e-25 qmcA O prohibitin homologues
LIEMIIIA_01131 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LIEMIIIA_01132 4.2e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
LIEMIIIA_01133 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LIEMIIIA_01134 3.5e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LIEMIIIA_01135 5.1e-251 dnaB L Replication initiation and membrane attachment
LIEMIIIA_01136 2.1e-168 dnaI L Primosomal protein DnaI
LIEMIIIA_01137 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LIEMIIIA_01138 3e-246 brnQ U Component of the transport system for branched-chain amino acids
LIEMIIIA_01139 2.8e-119 3.6.1.55 F NUDIX domain
LIEMIIIA_01140 3.1e-113 ltrA S Bacterial low temperature requirement A protein (LtrA)
LIEMIIIA_01141 2.7e-83 S Protein of unknown function (DUF1211)
LIEMIIIA_01142 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
LIEMIIIA_01143 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
LIEMIIIA_01144 1.7e-29 secG U Preprotein translocase
LIEMIIIA_01145 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
LIEMIIIA_01146 1.4e-176 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
LIEMIIIA_01147 7.6e-202 cpoA GT4 M Glycosyltransferase, group 1 family protein
LIEMIIIA_01148 7.9e-224 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
LIEMIIIA_01153 4.5e-68 S Domain of unknown function (DUF1934)
LIEMIIIA_01154 1.8e-47 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
LIEMIIIA_01155 2.7e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
LIEMIIIA_01156 1.4e-245 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LIEMIIIA_01157 2.1e-80 K acetyltransferase
LIEMIIIA_01158 1.3e-47 adk 2.7.4.3 F AAA domain
LIEMIIIA_01159 4.4e-285 pipD E Dipeptidase
LIEMIIIA_01160 2.5e-152 msmR K AraC-like ligand binding domain
LIEMIIIA_01161 1.4e-226 pbuX F xanthine permease
LIEMIIIA_01162 3.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
LIEMIIIA_01163 2.4e-43 K Helix-turn-helix
LIEMIIIA_01164 7.8e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
LIEMIIIA_01166 4.9e-99 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
LIEMIIIA_01167 8.7e-117 3.2.1.18 GH33 M Rib/alpha-like repeat
LIEMIIIA_01168 2.3e-184 3.2.1.18 GH33 M Rib/alpha-like repeat
LIEMIIIA_01170 7.8e-78 2.5.1.74 H UbiA prenyltransferase family
LIEMIIIA_01171 1e-95
LIEMIIIA_01172 0.0 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
LIEMIIIA_01173 6.8e-181 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LIEMIIIA_01174 1.1e-243 yfnA E Amino Acid
LIEMIIIA_01175 6.8e-110 dedA 3.1.3.1 S SNARE associated Golgi protein
LIEMIIIA_01176 3.6e-151 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
LIEMIIIA_01177 9e-144 2.4.2.3 F Phosphorylase superfamily
LIEMIIIA_01178 1.9e-138 2.4.2.3 F Phosphorylase superfamily
LIEMIIIA_01181 3e-21
LIEMIIIA_01182 3.7e-83
LIEMIIIA_01183 8.2e-31 yozG K Transcriptional regulator
LIEMIIIA_01184 2e-23
LIEMIIIA_01185 1.7e-67
LIEMIIIA_01186 1.1e-164 natA S ABC transporter, ATP-binding protein
LIEMIIIA_01187 1.8e-218 natB CP ABC-2 family transporter protein
LIEMIIIA_01188 1.8e-136 fruR K DeoR C terminal sensor domain
LIEMIIIA_01189 2.2e-168 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
LIEMIIIA_01190 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
LIEMIIIA_01191 5.4e-41 K helix_turn_helix, Arsenical Resistance Operon Repressor
LIEMIIIA_01192 1.6e-147 psaA P Belongs to the bacterial solute-binding protein 9 family
LIEMIIIA_01193 3.6e-117 fhuC P ABC transporter
LIEMIIIA_01194 5e-129 znuB U ABC 3 transport family
LIEMIIIA_01195 4.5e-264 lctP C L-lactate permease
LIEMIIIA_01196 6.7e-89 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
LIEMIIIA_01197 1.5e-216 2.1.1.14 E methionine synthase, vitamin-B12 independent
LIEMIIIA_01198 1.2e-11
LIEMIIIA_01199 1.6e-25 K Helix-turn-helix XRE-family like proteins
LIEMIIIA_01201 3.7e-182 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
LIEMIIIA_01202 4.9e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
LIEMIIIA_01203 3.1e-192 oppD P Belongs to the ABC transporter superfamily
LIEMIIIA_01204 1.5e-170 oppF P Belongs to the ABC transporter superfamily
LIEMIIIA_01205 2.6e-172 oppB P ABC transporter permease
LIEMIIIA_01206 5.6e-132 oppC P Binding-protein-dependent transport system inner membrane component
LIEMIIIA_01207 9.7e-46 oppA E ABC transporter substrate-binding protein
LIEMIIIA_01208 3.8e-15 S Domain of Unknown Function with PDB structure (DUF3850)
LIEMIIIA_01210 2.9e-12
LIEMIIIA_01211 2e-18 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
LIEMIIIA_01212 1e-205 M Glycosyl hydrolases family 25
LIEMIIIA_01213 2.8e-157 cinI S Serine hydrolase (FSH1)
LIEMIIIA_01214 4.3e-298 S Predicted membrane protein (DUF2207)
LIEMIIIA_01215 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
LIEMIIIA_01217 7.8e-255 S Uncharacterized protein conserved in bacteria (DUF2325)
LIEMIIIA_01218 3.7e-151 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIEMIIIA_01219 1.3e-48 rplU J This protein binds to 23S rRNA in the presence of protein L20
LIEMIIIA_01220 1.3e-47 rpmA J Belongs to the bacterial ribosomal protein bL27 family
LIEMIIIA_01221 1e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
LIEMIIIA_01222 4.9e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LIEMIIIA_01223 3.4e-71 yqhY S Asp23 family, cell envelope-related function
LIEMIIIA_01224 9.2e-262 emrY EGP Major facilitator Superfamily
LIEMIIIA_01225 8.8e-90 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
LIEMIIIA_01226 7.6e-239 pyrP F Permease
LIEMIIIA_01227 6e-21 K Putative DNA-binding domain
LIEMIIIA_01228 5.8e-211 M Glycosyl hydrolases family 25
LIEMIIIA_01229 8e-111 XK27_00160 S Domain of unknown function (DUF5052)
LIEMIIIA_01230 4.1e-67
LIEMIIIA_01231 5.4e-203 xerS L Belongs to the 'phage' integrase family
LIEMIIIA_01232 1.5e-304 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
LIEMIIIA_01233 2.1e-255 S Archaea bacterial proteins of unknown function
LIEMIIIA_01234 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
LIEMIIIA_01235 1.7e-212 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
LIEMIIIA_01236 1.8e-40 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
LIEMIIIA_01237 1e-24
LIEMIIIA_01238 9.5e-26
LIEMIIIA_01239 2.5e-33
LIEMIIIA_01240 1.4e-53 S Enterocin A Immunity
LIEMIIIA_01241 8e-145 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
LIEMIIIA_01242 5.5e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LIEMIIIA_01243 6.6e-207 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
LIEMIIIA_01244 9.6e-121 K response regulator
LIEMIIIA_01246 0.0 V ABC transporter
LIEMIIIA_01247 4.2e-144 V ABC transporter, ATP-binding protein
LIEMIIIA_01248 1.2e-145 V ABC transporter, ATP-binding protein
LIEMIIIA_01249 3.8e-137 XK27_01040 S Protein of unknown function (DUF1129)
LIEMIIIA_01250 3.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
LIEMIIIA_01251 9.6e-45 yyzM S Bacterial protein of unknown function (DUF951)
LIEMIIIA_01252 1.5e-153 spo0J K Belongs to the ParB family
LIEMIIIA_01253 3.4e-138 soj D Sporulation initiation inhibitor
LIEMIIIA_01254 5e-148 noc K Belongs to the ParB family
LIEMIIIA_01255 1.2e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
LIEMIIIA_01256 3.2e-240 npr 1.11.1.1 C NADH oxidase
LIEMIIIA_01257 6.6e-11
LIEMIIIA_01258 1.3e-22 3.6.4.12 S transposase or invertase
LIEMIIIA_01259 6.7e-228 slpX S SLAP domain
LIEMIIIA_01260 4.4e-144 K SIS domain
LIEMIIIA_01261 8.1e-120 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
LIEMIIIA_01262 2.7e-185 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
LIEMIIIA_01263 6.5e-210 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
LIEMIIIA_01265 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
LIEMIIIA_01266 0.0 1.3.5.4 C FAD binding domain
LIEMIIIA_01267 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
LIEMIIIA_01268 1.7e-249 yhdP S Transporter associated domain
LIEMIIIA_01269 3.9e-119 C nitroreductase
LIEMIIIA_01270 2.1e-39
LIEMIIIA_01271 2.9e-87 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
LIEMIIIA_01272 1.6e-80
LIEMIIIA_01273 4.1e-147 glvR K Helix-turn-helix domain, rpiR family
LIEMIIIA_01274 0.0 glvC 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
LIEMIIIA_01275 5.4e-147 S hydrolase
LIEMIIIA_01276 2e-160 rssA S Phospholipase, patatin family
LIEMIIIA_01277 3.9e-107 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
LIEMIIIA_01278 2.5e-63 rbtT P Major Facilitator Superfamily
LIEMIIIA_01279 4.2e-63 lmrB EGP Major facilitator Superfamily
LIEMIIIA_01280 8.5e-87 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
LIEMIIIA_01281 1e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LIEMIIIA_01282 1.7e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
LIEMIIIA_01283 4e-249 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
LIEMIIIA_01284 8e-260 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
LIEMIIIA_01285 2.5e-39 rpmE2 J Ribosomal protein L31
LIEMIIIA_01286 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
LIEMIIIA_01287 2.6e-157 S Sucrose-6F-phosphate phosphohydrolase
LIEMIIIA_01288 9.5e-297 ybeC E amino acid
LIEMIIIA_01289 6.4e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
LIEMIIIA_01290 2.1e-42
LIEMIIIA_01291 1.4e-51
LIEMIIIA_01292 1.9e-17 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
LIEMIIIA_01293 0.0 XK27_08315 M Sulfatase
LIEMIIIA_01294 1.6e-111 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
LIEMIIIA_01295 2.7e-202 brpA K Cell envelope-like function transcriptional attenuator common domain protein
LIEMIIIA_01296 1.4e-98 G Aldose 1-epimerase
LIEMIIIA_01297 5e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LIEMIIIA_01298 2.1e-116
LIEMIIIA_01299 2.1e-130
LIEMIIIA_01300 7.8e-161 S Oxidoreductase family, NAD-binding Rossmann fold
LIEMIIIA_01301 1.7e-106 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
LIEMIIIA_01302 0.0 yjbQ P TrkA C-terminal domain protein
LIEMIIIA_01303 2.5e-179 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
LIEMIIIA_01304 5.4e-215 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
LIEMIIIA_01306 7.6e-305 yloV S DAK2 domain fusion protein YloV
LIEMIIIA_01307 1.5e-56 asp S Asp23 family, cell envelope-related function
LIEMIIIA_01308 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
LIEMIIIA_01309 1.4e-52 EGP Sugar (and other) transporter
LIEMIIIA_01310 1e-104
LIEMIIIA_01311 8.2e-114 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
LIEMIIIA_01312 0.0 copA 3.6.3.54 P P-type ATPase
LIEMIIIA_01313 3.1e-49 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
LIEMIIIA_01314 4.9e-58 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
LIEMIIIA_01315 2.4e-36
LIEMIIIA_01318 3.5e-111 G phosphoglycerate mutase
LIEMIIIA_01319 3.2e-92 ygfC K Bacterial regulatory proteins, tetR family
LIEMIIIA_01320 2.1e-175 hrtB V ABC transporter permease
LIEMIIIA_01321 1.5e-102 devA 3.6.3.25 V ABC transporter, ATP-binding protein
LIEMIIIA_01322 1.3e-273 pipD E Dipeptidase
LIEMIIIA_01323 2.8e-309 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
LIEMIIIA_01324 2.3e-23 S Protein of unknown function (DUF2929)
LIEMIIIA_01325 0.0 dnaE 2.7.7.7 L DNA polymerase
LIEMIIIA_01326 3.3e-183 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
LIEMIIIA_01327 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
LIEMIIIA_01328 1e-167 cvfB S S1 domain
LIEMIIIA_01329 2.9e-165 xerD D recombinase XerD
LIEMIIIA_01330 2.6e-61 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LIEMIIIA_01331 7.6e-132 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
LIEMIIIA_01332 4.1e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LIEMIIIA_01333 9e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
LIEMIIIA_01334 8.7e-114 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
LIEMIIIA_01335 2.7e-18 M Lysin motif
LIEMIIIA_01336 2.2e-114 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
LIEMIIIA_01337 5.5e-212 rpsA 1.17.7.4 J Ribosomal protein S1
LIEMIIIA_01338 1.9e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
LIEMIIIA_01339 2.3e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
LIEMIIIA_01340 1.4e-75 S Tetratricopeptide repeat protein
LIEMIIIA_01341 3.8e-99 S Tetratricopeptide repeat protein
LIEMIIIA_01342 2.1e-235 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LIEMIIIA_01343 1.2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LIEMIIIA_01344 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
LIEMIIIA_01345 1.5e-102 srtA 3.4.22.70 M sortase family
LIEMIIIA_01346 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
LIEMIIIA_01347 2.2e-202 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
LIEMIIIA_01348 0.0 dnaK O Heat shock 70 kDa protein
LIEMIIIA_01349 8e-68 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LIEMIIIA_01350 4.9e-193 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
LIEMIIIA_01351 3.2e-175 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
LIEMIIIA_01352 1.6e-155 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LIEMIIIA_01353 1.1e-59 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LIEMIIIA_01354 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LIEMIIIA_01355 3.2e-47 rplGA J ribosomal protein
LIEMIIIA_01356 8.8e-47 ylxR K Protein of unknown function (DUF448)
LIEMIIIA_01357 1.4e-196 nusA K Participates in both transcription termination and antitermination
LIEMIIIA_01358 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
LIEMIIIA_01359 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LIEMIIIA_01360 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
LIEMIIIA_01361 5.7e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
LIEMIIIA_01362 8.4e-140 cdsA 2.7.7.41 I Belongs to the CDS family
LIEMIIIA_01363 1.3e-136 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LIEMIIIA_01364 5.3e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
LIEMIIIA_01365 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
LIEMIIIA_01366 3.1e-184 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LIEMIIIA_01367 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
LIEMIIIA_01368 3e-195 yabB 2.1.1.223 L Methyltransferase small domain
LIEMIIIA_01369 2.9e-116 plsC 2.3.1.51 I Acyltransferase
LIEMIIIA_01370 3.9e-223 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
LIEMIIIA_01371 0.0 pepO 3.4.24.71 O Peptidase family M13
LIEMIIIA_01372 0.0 mdlB V ABC transporter
LIEMIIIA_01373 0.0 mdlA V ABC transporter
LIEMIIIA_01374 5.5e-30 yneF S Uncharacterised protein family (UPF0154)
LIEMIIIA_01375 3e-38 ynzC S UPF0291 protein
LIEMIIIA_01376 2e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LIEMIIIA_01377 9.8e-146 E GDSL-like Lipase/Acylhydrolase family
LIEMIIIA_01378 5.4e-121 ung2 3.2.2.27 L Uracil-DNA glycosylase
LIEMIIIA_01379 4.6e-213 S SLAP domain
LIEMIIIA_01380 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
LIEMIIIA_01381 3.2e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
LIEMIIIA_01382 3.4e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LIEMIIIA_01383 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
LIEMIIIA_01384 4.9e-228 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LIEMIIIA_01385 6e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
LIEMIIIA_01386 2.7e-258 yfnA E amino acid
LIEMIIIA_01387 0.0 V FtsX-like permease family
LIEMIIIA_01388 4.1e-133 cysA V ABC transporter, ATP-binding protein
LIEMIIIA_01389 3.4e-23
LIEMIIIA_01391 2.5e-288 pipD E Dipeptidase
LIEMIIIA_01392 3.6e-161 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
LIEMIIIA_01393 0.0 smc D Required for chromosome condensation and partitioning
LIEMIIIA_01394 1.9e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
LIEMIIIA_01395 2.1e-308 oppA E ABC transporter substrate-binding protein
LIEMIIIA_01396 3.1e-240 oppA E ABC transporter substrate-binding protein
LIEMIIIA_01397 8.6e-99 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
LIEMIIIA_01398 1.4e-16 L Transposase
LIEMIIIA_01399 1.9e-12 L Transposase
LIEMIIIA_01400 1.3e-55 K Acetyltransferase (GNAT) domain
LIEMIIIA_01401 1.2e-10
LIEMIIIA_01402 2.8e-65 K LytTr DNA-binding domain
LIEMIIIA_01403 1.2e-49 S Protein of unknown function (DUF3021)
LIEMIIIA_01404 6.3e-105 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
LIEMIIIA_01405 1.9e-118 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
LIEMIIIA_01406 6e-132 S membrane transporter protein
LIEMIIIA_01407 3.7e-125 gpmB G Belongs to the phosphoglycerate mutase family
LIEMIIIA_01408 7.3e-161 czcD P cation diffusion facilitator family transporter
LIEMIIIA_01409 1.4e-23
LIEMIIIA_01410 1.2e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LIEMIIIA_01411 1.1e-183 S AAA domain
LIEMIIIA_01412 3.9e-267 pepC 3.4.22.40 E Peptidase C1-like family
LIEMIIIA_01413 1.9e-52
LIEMIIIA_01414 1.8e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
LIEMIIIA_01415 2.7e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LIEMIIIA_01416 1.9e-291 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LIEMIIIA_01417 2.9e-276 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
LIEMIIIA_01418 2.3e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
LIEMIIIA_01419 1.7e-139 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LIEMIIIA_01420 5.5e-95 sigH K Belongs to the sigma-70 factor family
LIEMIIIA_01421 1.7e-34
LIEMIIIA_01422 5.8e-288 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
LIEMIIIA_01423 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LIEMIIIA_01424 3.6e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
LIEMIIIA_01425 1.2e-100 nusG K Participates in transcription elongation, termination and antitermination
LIEMIIIA_01426 1.2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LIEMIIIA_01427 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
LIEMIIIA_01428 2.8e-157 pstS P Phosphate
LIEMIIIA_01429 3.9e-163 pstC P probably responsible for the translocation of the substrate across the membrane
LIEMIIIA_01430 1.2e-155 pstA P Phosphate transport system permease protein PstA
LIEMIIIA_01431 5e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LIEMIIIA_01432 2.3e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LIEMIIIA_01433 7.5e-118 phoU P Plays a role in the regulation of phosphate uptake
LIEMIIIA_01434 5.8e-85 2.3.1.128 K Acetyltransferase (GNAT) domain
LIEMIIIA_01435 2e-157 S reductase
LIEMIIIA_01436 9.3e-35
LIEMIIIA_01437 4.4e-103 K Putative DNA-binding domain
LIEMIIIA_01438 2.9e-277 V ABC transporter transmembrane region
LIEMIIIA_01439 2.1e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
LIEMIIIA_01440 3.1e-130 T Transcriptional regulatory protein, C terminal
LIEMIIIA_01441 5.2e-187 T GHKL domain
LIEMIIIA_01442 3.4e-76 S Peptidase propeptide and YPEB domain
LIEMIIIA_01443 2.5e-72 S Peptidase propeptide and YPEB domain
LIEMIIIA_01444 4.7e-83 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
LIEMIIIA_01445 3.8e-65 yybA 2.3.1.57 K Transcriptional regulator
LIEMIIIA_01446 7e-68 V ABC transporter transmembrane region
LIEMIIIA_01447 5.8e-160 V ABC transporter transmembrane region
LIEMIIIA_01448 7.5e-100 J Acetyltransferase (GNAT) domain
LIEMIIIA_01449 1.3e-248 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LIEMIIIA_01450 9.1e-10 UW LPXTG-motif cell wall anchor domain protein
LIEMIIIA_01451 3.3e-45 UW LPXTG-motif cell wall anchor domain protein
LIEMIIIA_01452 1.3e-161 UW LPXTG-motif cell wall anchor domain protein
LIEMIIIA_01453 2.1e-135 UW LPXTG-motif cell wall anchor domain protein
LIEMIIIA_01454 2.4e-44
LIEMIIIA_01455 1.3e-284 lsa S ABC transporter
LIEMIIIA_01456 5.2e-68 L haloacid dehalogenase-like hydrolase
LIEMIIIA_01457 4.9e-123 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
LIEMIIIA_01458 7.2e-129 ulaE 5.1.3.22 G Xylose isomerase-like TIM barrel
LIEMIIIA_01459 2.8e-90 ulaD 4.1.1.85, 4.1.2.43 G Orotidine 5'-phosphate decarboxylase / HUMPS family
LIEMIIIA_01460 4.1e-31 sgaB 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
LIEMIIIA_01461 5.3e-233 ulaA S PTS system sugar-specific permease component
LIEMIIIA_01462 1.5e-61 cmtB 2.7.1.194, 2.7.1.197, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LIEMIIIA_01463 8.1e-175 ulaG S Beta-lactamase superfamily domain
LIEMIIIA_01464 2.2e-78 S helix_turn_helix, Deoxyribose operon repressor
LIEMIIIA_01465 3.3e-140 repB EP Plasmid replication protein
LIEMIIIA_01466 2.2e-22
LIEMIIIA_01467 7.8e-52 V ABC-type multidrug transport system, ATPase and permease components
LIEMIIIA_01468 2.6e-275 V ABC-type multidrug transport system, ATPase and permease components
LIEMIIIA_01469 7.7e-30 ropB K Helix-turn-helix domain
LIEMIIIA_01470 1.1e-110 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LIEMIIIA_01471 6.6e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
LIEMIIIA_01472 1.1e-71 yslB S Protein of unknown function (DUF2507)
LIEMIIIA_01473 9.7e-59 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
LIEMIIIA_01474 3.5e-54 trxA O Belongs to the thioredoxin family
LIEMIIIA_01475 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
LIEMIIIA_01476 1.1e-50 yrzB S Belongs to the UPF0473 family
LIEMIIIA_01477 6.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LIEMIIIA_01478 2e-42 yrzL S Belongs to the UPF0297 family
LIEMIIIA_01479 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LIEMIIIA_01480 2e-226 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
LIEMIIIA_01481 1.4e-181 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
LIEMIIIA_01482 6.2e-210 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LIEMIIIA_01483 9.6e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LIEMIIIA_01484 9.6e-41 yajC U Preprotein translocase
LIEMIIIA_01485 3.7e-185 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
LIEMIIIA_01486 1.7e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
LIEMIIIA_01487 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
LIEMIIIA_01488 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LIEMIIIA_01489 5.9e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
LIEMIIIA_01490 1.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
LIEMIIIA_01491 3.5e-75
LIEMIIIA_01492 2.3e-181 M CHAP domain
LIEMIIIA_01493 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
LIEMIIIA_01494 3.7e-295 scrB 3.2.1.26 GH32 G invertase
LIEMIIIA_01495 1.1e-183 scrR K helix_turn _helix lactose operon repressor
LIEMIIIA_01496 1.2e-299 I Protein of unknown function (DUF2974)
LIEMIIIA_01497 2.1e-194 pbpX1 V Beta-lactamase
LIEMIIIA_01498 2.6e-197 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LIEMIIIA_01499 2.7e-216 aspC 2.6.1.1 E Aminotransferase
LIEMIIIA_01500 7e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
LIEMIIIA_01501 9.8e-177 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LIEMIIIA_01502 2e-219 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
LIEMIIIA_01503 2.8e-75 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
LIEMIIIA_01504 1.8e-245 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
LIEMIIIA_01505 1.3e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
LIEMIIIA_01506 2.3e-192 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
LIEMIIIA_01507 3.4e-175 yjeM E Amino Acid
LIEMIIIA_01508 7.8e-39 yjeM E Amino Acid
LIEMIIIA_01509 1.4e-104 engB D Necessary for normal cell division and for the maintenance of normal septation
LIEMIIIA_01510 2e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LIEMIIIA_01511 5.8e-215 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
LIEMIIIA_01512 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LIEMIIIA_01513 1.3e-148
LIEMIIIA_01514 3e-310 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LIEMIIIA_01515 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LIEMIIIA_01516 2.6e-34 rpsT J Binds directly to 16S ribosomal RNA
LIEMIIIA_01517 2.6e-175 holA 2.7.7.7 L DNA polymerase III delta subunit
LIEMIIIA_01518 0.0 comEC S Competence protein ComEC
LIEMIIIA_01519 3.1e-79 comEA L Competence protein ComEA
LIEMIIIA_01520 2.4e-187 ylbL T Belongs to the peptidase S16 family
LIEMIIIA_01521 3.6e-82 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LIEMIIIA_01522 4.5e-97 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
LIEMIIIA_01523 5.1e-54 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
LIEMIIIA_01524 5.9e-211 ftsW D Belongs to the SEDS family
LIEMIIIA_01525 0.0 typA T GTP-binding protein TypA
LIEMIIIA_01526 8.9e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LIEMIIIA_01527 3.5e-32 ykzG S Belongs to the UPF0356 family
LIEMIIIA_01528 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LIEMIIIA_01529 1.2e-188 K Periplasmic binding protein-like domain
LIEMIIIA_01530 2e-106 K Transcriptional regulator, AbiEi antitoxin
LIEMIIIA_01531 7.6e-163 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
LIEMIIIA_01532 5.3e-189 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
LIEMIIIA_01533 2.1e-142 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
LIEMIIIA_01534 9.3e-80 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
LIEMIIIA_01535 7.2e-221 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
LIEMIIIA_01536 5.4e-165 lacR K Transcriptional regulator
LIEMIIIA_01537 8.9e-207 lacS G Transporter
LIEMIIIA_01538 5.7e-103 lacS G Transporter
LIEMIIIA_01539 0.0 lacZ 3.2.1.23 G -beta-galactosidase
LIEMIIIA_01540 1.1e-220 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
LIEMIIIA_01541 2e-288 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
LIEMIIIA_01542 1.2e-196 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
LIEMIIIA_01543 2.9e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
LIEMIIIA_01544 7.1e-46
LIEMIIIA_01545 3.1e-148 glcU U sugar transport
LIEMIIIA_01546 3.7e-250 lctP C L-lactate permease
LIEMIIIA_01547 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
LIEMIIIA_01548 6.4e-212 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
LIEMIIIA_01549 8.8e-245 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
LIEMIIIA_01550 1.6e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
LIEMIIIA_01551 7.2e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
LIEMIIIA_01552 9.1e-167 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
LIEMIIIA_01553 1.6e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
LIEMIIIA_01554 1.9e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LIEMIIIA_01555 1.5e-102 GM NmrA-like family
LIEMIIIA_01556 1.3e-31
LIEMIIIA_01557 3.9e-131 K Helix-turn-helix XRE-family like proteins
LIEMIIIA_01559 9.2e-119 yhiD S MgtC family
LIEMIIIA_01560 4.7e-227 I Protein of unknown function (DUF2974)
LIEMIIIA_01561 1.4e-16
LIEMIIIA_01563 3.3e-166 scrK 2.7.1.2, 2.7.1.4 GK ROK family
LIEMIIIA_01564 4.2e-135 V ABC transporter transmembrane region
LIEMIIIA_01565 3.7e-168 degV S DegV family
LIEMIIIA_01566 2.3e-165 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
LIEMIIIA_01567 6.7e-254 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
LIEMIIIA_01568 5.7e-69 rplI J Binds to the 23S rRNA
LIEMIIIA_01569 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
LIEMIIIA_01570 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LIEMIIIA_01571 2.7e-75 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
LIEMIIIA_01572 5.5e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
LIEMIIIA_01573 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LIEMIIIA_01574 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LIEMIIIA_01575 4e-209 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LIEMIIIA_01576 2.6e-35 yaaA S S4 domain protein YaaA
LIEMIIIA_01577 3.1e-185 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
LIEMIIIA_01578 9.5e-245 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LIEMIIIA_01579 2e-10 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
LIEMIIIA_01580 9.5e-82 XK27_04435 3.5.4.5 J FR47-like protein
LIEMIIIA_01581 1.4e-36 S Cytochrome B5
LIEMIIIA_01582 6e-168 arbZ I Phosphate acyltransferases
LIEMIIIA_01583 1.6e-182 arbY M Glycosyl transferase family 8
LIEMIIIA_01584 5e-184 arbY M Glycosyl transferase family 8
LIEMIIIA_01585 5e-156 arbx M Glycosyl transferase family 8
LIEMIIIA_01586 1.6e-148 arbV 2.3.1.51 I Acyl-transferase
LIEMIIIA_01588 4.9e-34
LIEMIIIA_01590 4.8e-131 K response regulator
LIEMIIIA_01591 2.2e-305 vicK 2.7.13.3 T Histidine kinase
LIEMIIIA_01592 1.6e-257 yycH S YycH protein
LIEMIIIA_01593 3.4e-149 yycI S YycH protein
LIEMIIIA_01594 4.1e-147 vicX 3.1.26.11 S domain protein
LIEMIIIA_01595 1.6e-161 htrA 3.4.21.107 O serine protease
LIEMIIIA_01596 1e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LIEMIIIA_01597 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LIEMIIIA_01598 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
LIEMIIIA_01599 4.6e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
LIEMIIIA_01600 5.1e-17
LIEMIIIA_01601 5.8e-180 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
LIEMIIIA_01602 9.2e-158 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LIEMIIIA_01603 5.6e-191 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
LIEMIIIA_01605 2e-178 MA20_14895 S Conserved hypothetical protein 698
LIEMIIIA_01606 1.1e-83 dps P Belongs to the Dps family
LIEMIIIA_01607 3.8e-20 1.3.5.4 C FAD dependent oxidoreductase
LIEMIIIA_01608 5.6e-101 yihX 3.1.3.10, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
LIEMIIIA_01609 1.8e-58 S Putative adhesin
LIEMIIIA_01610 3.5e-71 yjaB 2.3.1.181 K Acetyltransferase (GNAT) domain
LIEMIIIA_01611 2e-234 mepA V MATE efflux family protein
LIEMIIIA_01612 7.3e-126 S Alpha/beta hydrolase family
LIEMIIIA_01613 3.7e-156 epsV 2.7.8.12 S glycosyl transferase family 2
LIEMIIIA_01614 4.4e-140 ypuA S Protein of unknown function (DUF1002)
LIEMIIIA_01615 3e-147 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LIEMIIIA_01616 7.7e-182 S Alpha/beta hydrolase of unknown function (DUF915)
LIEMIIIA_01617 2.5e-283 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LIEMIIIA_01618 9.3e-86
LIEMIIIA_01619 9.3e-147 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
LIEMIIIA_01620 0.0 mtlR K Mga helix-turn-helix domain
LIEMIIIA_01621 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
LIEMIIIA_01622 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
LIEMIIIA_01623 7.6e-49 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
LIEMIIIA_01624 6.8e-243 cycA E Amino acid permease
LIEMIIIA_01625 1.3e-85 maa S transferase hexapeptide repeat
LIEMIIIA_01626 3.3e-158 K Transcriptional regulator
LIEMIIIA_01627 1.1e-62 manO S Domain of unknown function (DUF956)
LIEMIIIA_01628 1e-173 manN G system, mannose fructose sorbose family IID component
LIEMIIIA_01629 1.7e-129 manY G PTS system
LIEMIIIA_01630 2.5e-186 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
LIEMIIIA_01631 0.0 S SH3-like domain
LIEMIIIA_01632 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LIEMIIIA_01633 2.1e-171 whiA K May be required for sporulation
LIEMIIIA_01634 4e-195 ybhK S Required for morphogenesis under gluconeogenic growth conditions
LIEMIIIA_01635 6.2e-165 rapZ S Displays ATPase and GTPase activities
LIEMIIIA_01636 4.1e-90 S Short repeat of unknown function (DUF308)
LIEMIIIA_01637 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
LIEMIIIA_01638 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
LIEMIIIA_01639 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
LIEMIIIA_01640 3.9e-181 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
LIEMIIIA_01641 4.9e-63 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
LIEMIIIA_01642 5.4e-13
LIEMIIIA_01643 4.1e-217 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
LIEMIIIA_01644 0.0 G Belongs to the glycosyl hydrolase 31 family
LIEMIIIA_01645 8.7e-145 I alpha/beta hydrolase fold
LIEMIIIA_01646 4.9e-129 yibF S overlaps another CDS with the same product name
LIEMIIIA_01647 2.2e-202 yibE S overlaps another CDS with the same product name
LIEMIIIA_01648 1.4e-112
LIEMIIIA_01649 1.2e-205 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
LIEMIIIA_01650 6.4e-224 S Cysteine-rich secretory protein family
LIEMIIIA_01651 2.6e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
LIEMIIIA_01652 1.3e-258 glnPH2 P ABC transporter permease
LIEMIIIA_01653 2.8e-135
LIEMIIIA_01654 8.4e-125 luxT K Bacterial regulatory proteins, tetR family
LIEMIIIA_01655 3.3e-183 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LIEMIIIA_01656 5.6e-36
LIEMIIIA_01657 4.1e-33 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
LIEMIIIA_01658 2.8e-48 S Peptidase propeptide and YPEB domain
LIEMIIIA_01659 3.2e-96 L An automated process has identified a potential problem with this gene model
LIEMIIIA_01660 2.3e-168 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
LIEMIIIA_01661 2.1e-79 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LIEMIIIA_01662 1e-218 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
LIEMIIIA_01663 3.2e-28 4.1.1.44 S Carboxymuconolactone decarboxylase family
LIEMIIIA_01664 2.3e-78 4.1.1.44 S Carboxymuconolactone decarboxylase family
LIEMIIIA_01665 2.1e-32
LIEMIIIA_01666 3.7e-59 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
LIEMIIIA_01667 2.3e-156 K Helix-turn-helix XRE-family like proteins
LIEMIIIA_01668 3.9e-298 V ABC transporter transmembrane region
LIEMIIIA_01669 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
LIEMIIIA_01670 1.7e-193 S TerB-C domain
LIEMIIIA_01671 1.3e-116 S Peptidase family M23
LIEMIIIA_01672 1.8e-104 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LIEMIIIA_01674 4.6e-160 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIEMIIIA_01675 9.4e-118
LIEMIIIA_01676 1.2e-155 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
LIEMIIIA_01677 6.6e-221 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
LIEMIIIA_01678 2.6e-280 thrC 4.2.3.1 E Threonine synthase
LIEMIIIA_01679 8.8e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
LIEMIIIA_01680 9.6e-103 pgm3 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
LIEMIIIA_01681 1.4e-69 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
LIEMIIIA_01682 5.1e-226 N Uncharacterized conserved protein (DUF2075)
LIEMIIIA_01683 4.8e-205 pbpX1 V Beta-lactamase
LIEMIIIA_01684 0.0 L Helicase C-terminal domain protein
LIEMIIIA_01685 1.3e-273 E amino acid
LIEMIIIA_01686 1.8e-158 xth 3.1.11.2 L exodeoxyribonuclease III
LIEMIIIA_01689 1.2e-191 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LIEMIIIA_01690 4.3e-79 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
LIEMIIIA_01691 1.9e-122 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
LIEMIIIA_01692 1.1e-128 accA 2.1.3.15, 6.4.1.2 I alpha subunit
LIEMIIIA_01693 3.3e-139 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
LIEMIIIA_01694 9.6e-237 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
LIEMIIIA_01695 9.2e-61 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
LIEMIIIA_01696 2.2e-49 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
LIEMIIIA_01697 4e-210 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
LIEMIIIA_01698 2.9e-107 IQ reductase
LIEMIIIA_01699 1.7e-139 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
LIEMIIIA_01700 2.1e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
LIEMIIIA_01701 2.9e-38 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LIEMIIIA_01702 1.1e-86 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LIEMIIIA_01703 1.3e-48 4.2.1.59 I 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LIEMIIIA_01704 1.6e-73 marR K Transcriptional regulator, MarR family
LIEMIIIA_01707 2.9e-23
LIEMIIIA_01708 1.9e-186 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
LIEMIIIA_01709 0.0 L AAA domain
LIEMIIIA_01710 1e-226 yhaO L Ser Thr phosphatase family protein
LIEMIIIA_01711 7.2e-56 yheA S Belongs to the UPF0342 family
LIEMIIIA_01712 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
LIEMIIIA_01713 4.2e-150 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LIEMIIIA_01714 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
LIEMIIIA_01715 6.2e-276 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LIEMIIIA_01716 9.5e-31
LIEMIIIA_01717 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
LIEMIIIA_01718 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
LIEMIIIA_01719 2.1e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
LIEMIIIA_01720 8.4e-146 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LIEMIIIA_01721 3.5e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
LIEMIIIA_01722 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
LIEMIIIA_01723 8.4e-265 S Fibronectin type III domain
LIEMIIIA_01724 4.5e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LIEMIIIA_01725 3.4e-53
LIEMIIIA_01727 4.6e-257 pepC 3.4.22.40 E aminopeptidase
LIEMIIIA_01728 1.3e-122 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
LIEMIIIA_01729 5e-301 oppA E ABC transporter, substratebinding protein
LIEMIIIA_01730 1.6e-310 oppA E ABC transporter, substratebinding protein
LIEMIIIA_01731 1.2e-210 S Bacterial protein of unknown function (DUF871)
LIEMIIIA_01733 2.3e-43 ybhL S Belongs to the BI1 family
LIEMIIIA_01734 1.3e-159 degV S EDD domain protein, DegV family
LIEMIIIA_01735 1.1e-66
LIEMIIIA_01736 0.0 FbpA K Fibronectin-binding protein
LIEMIIIA_01737 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
LIEMIIIA_01738 1e-198 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
LIEMIIIA_01739 4.3e-169 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LIEMIIIA_01740 8e-79 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LIEMIIIA_01741 1.8e-285 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
LIEMIIIA_01742 5.5e-53
LIEMIIIA_01744 2.7e-34 S YSIRK type signal peptide
LIEMIIIA_01745 1.9e-110 F DNA/RNA non-specific endonuclease
LIEMIIIA_01746 2e-75 S cog cog0433
LIEMIIIA_01747 9.7e-65 yagE E amino acid
LIEMIIIA_01748 8.4e-128 yagE E Amino acid permease
LIEMIIIA_01749 4.3e-86 3.4.21.96 S SLAP domain
LIEMIIIA_01750 4.6e-160 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
LIEMIIIA_01751 1.1e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
LIEMIIIA_01752 1.2e-107 hlyIII S protein, hemolysin III
LIEMIIIA_01753 5.7e-147 DegV S Uncharacterised protein, DegV family COG1307
LIEMIIIA_01754 7.1e-36 yozE S Belongs to the UPF0346 family
LIEMIIIA_01755 1.1e-66 yjcE P NhaP-type Na H and K H
LIEMIIIA_01756 1.5e-40 yjcE P Sodium proton antiporter
LIEMIIIA_01757 1.9e-94 yjcE P Sodium proton antiporter
LIEMIIIA_01758 2.8e-154 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LIEMIIIA_01759 4.6e-132 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LIEMIIIA_01760 5.8e-152 dprA LU DNA protecting protein DprA
LIEMIIIA_01761 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LIEMIIIA_01762 1.4e-248 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
LIEMIIIA_01763 5e-141 xerC D Phage integrase, N-terminal SAM-like domain
LIEMIIIA_01764 1.9e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
LIEMIIIA_01765 5.9e-234 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
LIEMIIIA_01766 4.8e-181 lacX 5.1.3.3 G Aldose 1-epimerase
LIEMIIIA_01767 1.4e-86 C Aldo keto reductase
LIEMIIIA_01768 3.8e-48 M LysM domain protein
LIEMIIIA_01769 2.9e-15 M LysM domain protein
LIEMIIIA_01770 2.6e-61 M Glycosyl hydrolases family 25
LIEMIIIA_01771 1.3e-61 M Glycosyl hydrolases family 25
LIEMIIIA_01772 2.8e-211 yfmL 3.6.4.13 L DEAD DEAH box helicase
LIEMIIIA_01773 4.7e-249 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LIEMIIIA_01775 2e-216 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
LIEMIIIA_01776 2.3e-93 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
LIEMIIIA_01777 1.8e-104 3.2.2.20 K acetyltransferase
LIEMIIIA_01779 4.3e-226 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LIEMIIIA_01780 4.9e-82 rarA L MgsA AAA+ ATPase C terminal
LIEMIIIA_01781 4.1e-21 K Helix-turn-helix domain, rpiR family
LIEMIIIA_01782 1.3e-71 K Helix-turn-helix domain, rpiR family
LIEMIIIA_01783 4.6e-171 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
LIEMIIIA_01784 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
LIEMIIIA_01785 6.7e-98 M ErfK YbiS YcfS YnhG
LIEMIIIA_01786 2.8e-154 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LIEMIIIA_01787 1.3e-240 dacA 3.4.16.4 M Belongs to the peptidase S11 family
LIEMIIIA_01789 4.7e-46 pspC KT PspC domain
LIEMIIIA_01790 3.3e-237 L COG2963 Transposase and inactivated derivatives
LIEMIIIA_01791 4.2e-92 S SNARE associated Golgi protein
LIEMIIIA_01792 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
LIEMIIIA_01793 6.4e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LIEMIIIA_01794 3.8e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LIEMIIIA_01795 1.2e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
LIEMIIIA_01796 6.8e-110 yjbK S CYTH
LIEMIIIA_01797 4.6e-114 yjbH Q Thioredoxin
LIEMIIIA_01798 4e-13 coiA 3.6.4.12 S Competence protein
LIEMIIIA_01799 3.3e-132 coiA 3.6.4.12 S Competence protein
LIEMIIIA_01800 8.5e-139 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
LIEMIIIA_01801 3.9e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
LIEMIIIA_01802 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LIEMIIIA_01803 8.5e-41 ptsH G phosphocarrier protein HPR
LIEMIIIA_01804 5.3e-26
LIEMIIIA_01805 4.4e-239 oppA2 E ABC transporter, substratebinding protein
LIEMIIIA_01806 3.4e-45 oppA2 E ABC transporter, substratebinding protein
LIEMIIIA_01807 3.3e-179
LIEMIIIA_01808 4.6e-123 gntR1 K UTRA
LIEMIIIA_01809 5.1e-71 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
LIEMIIIA_01810 5.3e-80
LIEMIIIA_01811 2e-295 S SLAP domain
LIEMIIIA_01812 4.8e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LIEMIIIA_01813 1.6e-171 2.7.1.2 GK ROK family
LIEMIIIA_01814 6.6e-44
LIEMIIIA_01815 9.4e-269 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
LIEMIIIA_01816 5.8e-78 M LysM domain protein
LIEMIIIA_01817 2.8e-86 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LIEMIIIA_01818 4.1e-78 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LIEMIIIA_01819 1.5e-16 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LIEMIIIA_01820 6.2e-12
LIEMIIIA_01821 2.3e-172 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
LIEMIIIA_01822 2.3e-30
LIEMIIIA_01824 2.9e-69 S Iron-sulphur cluster biosynthesis
LIEMIIIA_01825 6.5e-113 yncA 2.3.1.79 S Maltose acetyltransferase
LIEMIIIA_01826 6.2e-59 psiE S Phosphate-starvation-inducible E
LIEMIIIA_01828 4.4e-135 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
LIEMIIIA_01829 4.3e-228 amtB P ammonium transporter
LIEMIIIA_01830 1.4e-60
LIEMIIIA_01831 0.0 lhr L DEAD DEAH box helicase
LIEMIIIA_01832 1.4e-245 P P-loop Domain of unknown function (DUF2791)
LIEMIIIA_01833 2.6e-138 S TerB-C domain
LIEMIIIA_01834 2.1e-114 3.6.1.27 I Acid phosphatase homologues
LIEMIIIA_01835 1.1e-189 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
LIEMIIIA_01836 0.0 uvrA3 L excinuclease ABC, A subunit
LIEMIIIA_01837 9.9e-82 C Flavodoxin
LIEMIIIA_01838 7e-23 cydA 1.10.3.14 C ubiquinol oxidase
LIEMIIIA_01839 3.7e-130 ybbH_2 K rpiR family
LIEMIIIA_01840 3.4e-195 S Bacterial protein of unknown function (DUF871)
LIEMIIIA_01841 4.1e-214 2.7.1.208, 2.7.1.211 G phosphotransferase system
LIEMIIIA_01842 1.8e-119 S Putative esterase
LIEMIIIA_01843 1.6e-120 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
LIEMIIIA_01844 1.3e-79 ybbH_2 K Helix-turn-helix domain, rpiR family
LIEMIIIA_01846 8.5e-260 qacA EGP Major facilitator Superfamily
LIEMIIIA_01847 1.7e-221 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LIEMIIIA_01850 6.2e-165 psaA P Belongs to the bacterial solute-binding protein 9 family
LIEMIIIA_01852 1.2e-222 patA 2.6.1.1 E Aminotransferase
LIEMIIIA_01853 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
LIEMIIIA_01854 5.8e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
LIEMIIIA_01855 6e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
LIEMIIIA_01856 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LIEMIIIA_01857 8.5e-60
LIEMIIIA_01858 6.5e-176 prmA J Ribosomal protein L11 methyltransferase
LIEMIIIA_01859 8.2e-85 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LIEMIIIA_01860 5.9e-37 M domain protein
LIEMIIIA_01861 6e-151 3.1.3.48 T Tyrosine phosphatase family
LIEMIIIA_01862 2e-97 azr 1.5.1.36 S NADPH-dependent FMN reductase
LIEMIIIA_01863 6.4e-96 nqr 1.5.1.36 S NADPH-dependent FMN reductase
LIEMIIIA_01864 2.4e-110 K WHG domain
LIEMIIIA_01865 3e-37
LIEMIIIA_01866 4.8e-145 yeaE S Aldo/keto reductase family
LIEMIIIA_01867 4.4e-172 yufQ S Belongs to the binding-protein-dependent transport system permease family
LIEMIIIA_01868 1.9e-198 yufP S Belongs to the binding-protein-dependent transport system permease family
LIEMIIIA_01869 1.3e-282 xylG 3.6.3.17 S ABC transporter
LIEMIIIA_01870 6.9e-181 tcsA S ABC transporter substrate-binding protein PnrA-like
LIEMIIIA_01871 3.9e-201 tcsA S ABC transporter substrate-binding protein PnrA-like
LIEMIIIA_01872 2.8e-100 S ECF transporter, substrate-specific component
LIEMIIIA_01873 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
LIEMIIIA_01874 0.0 macB_3 V ABC transporter, ATP-binding protein
LIEMIIIA_01875 1.6e-194 S DUF218 domain
LIEMIIIA_01876 2.7e-120 S CAAX protease self-immunity
LIEMIIIA_01877 3e-111 ropB K Transcriptional regulator
LIEMIIIA_01878 4.2e-154 EGP Major facilitator Superfamily
LIEMIIIA_01879 5.4e-51
LIEMIIIA_01880 2.6e-155 mutR K Helix-turn-helix XRE-family like proteins
LIEMIIIA_01881 4.1e-276 V ABC transporter transmembrane region
LIEMIIIA_01882 2.3e-41 S YoeB-like toxin of bacterial type II toxin-antitoxin system
LIEMIIIA_01883 1.9e-47 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
LIEMIIIA_01884 2.8e-205 napA P Sodium/hydrogen exchanger family
LIEMIIIA_01885 0.0 cadA P P-type ATPase
LIEMIIIA_01886 7.4e-80 ykuL S (CBS) domain
LIEMIIIA_01887 1e-207 ywhK S Membrane
LIEMIIIA_01888 4.1e-44
LIEMIIIA_01889 1.2e-18 S D-Ala-teichoic acid biosynthesis protein
LIEMIIIA_01890 2.1e-285 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LIEMIIIA_01891 1.9e-236 dltB M MBOAT, membrane-bound O-acyltransferase family
LIEMIIIA_01892 1.7e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LIEMIIIA_01893 1.5e-247 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
LIEMIIIA_01894 7.6e-177 pbpX2 V Beta-lactamase
LIEMIIIA_01895 2.3e-133 S Protein of unknown function (DUF975)
LIEMIIIA_01896 2.7e-137 lysA2 M Glycosyl hydrolases family 25
LIEMIIIA_01897 7.9e-291 ytgP S Polysaccharide biosynthesis protein
LIEMIIIA_01898 1.9e-36
LIEMIIIA_01899 0.0 XK27_06780 V ABC transporter permease
LIEMIIIA_01900 5.1e-125 XK27_06785 V ABC transporter, ATP-binding protein
LIEMIIIA_01901 2.2e-238 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LIEMIIIA_01902 2.2e-165 S Alpha/beta hydrolase of unknown function (DUF915)
LIEMIIIA_01903 0.0 clpE O AAA domain (Cdc48 subfamily)
LIEMIIIA_01904 4.3e-115 lepB 3.4.21.89 U Belongs to the peptidase S26 family
LIEMIIIA_01905 9.7e-234 cycA E Amino acid permease
LIEMIIIA_01906 9.2e-248 yifK E Amino acid permease
LIEMIIIA_01907 6.4e-135 S PFAM Archaeal ATPase
LIEMIIIA_01908 2.4e-172 V HNH endonuclease
LIEMIIIA_01910 2.2e-139 puuD S peptidase C26
LIEMIIIA_01911 1.8e-230 steT_1 E amino acid
LIEMIIIA_01912 3.2e-189 asnA 6.3.1.1 F aspartate--ammonia ligase
LIEMIIIA_01913 3.9e-206 4.2.1.126 S Bacterial protein of unknown function (DUF871)
LIEMIIIA_01916 3.8e-125 1.3.5.4 C FAD binding domain
LIEMIIIA_01917 1.7e-213 1.3.5.4 C FAD binding domain
LIEMIIIA_01918 4.7e-221 tnpB L Putative transposase DNA-binding domain
LIEMIIIA_01919 5.5e-77 nrdI F NrdI Flavodoxin like
LIEMIIIA_01920 9.9e-177 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LIEMIIIA_01921 2.5e-68
LIEMIIIA_01922 9.1e-112 yvpB S Peptidase_C39 like family
LIEMIIIA_01923 1.1e-83 S Threonine/Serine exporter, ThrE
LIEMIIIA_01924 2.4e-136 thrE S Putative threonine/serine exporter
LIEMIIIA_01925 8.9e-292 S ABC transporter
LIEMIIIA_01926 8.3e-58
LIEMIIIA_01927 5e-72 rimL J Acetyltransferase (GNAT) domain
LIEMIIIA_01928 1.4e-34
LIEMIIIA_01929 1.2e-30
LIEMIIIA_01930 1.8e-111 S Protein of unknown function (DUF554)
LIEMIIIA_01931 8.7e-197 brpA K Cell envelope-like function transcriptional attenuator common domain protein
LIEMIIIA_01932 0.0 pepF E oligoendopeptidase F
LIEMIIIA_01933 2.9e-31
LIEMIIIA_01934 1.3e-69 doc S Prophage maintenance system killer protein
LIEMIIIA_01937 4.6e-27 S Enterocin A Immunity
LIEMIIIA_01938 1.7e-22 blpT
LIEMIIIA_01939 4.3e-89 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LIEMIIIA_01940 3.5e-175 S Cysteine-rich secretory protein family
LIEMIIIA_01941 1.6e-41
LIEMIIIA_01942 2.6e-118 M NlpC/P60 family
LIEMIIIA_01943 1.4e-136 M NlpC P60 family protein
LIEMIIIA_01944 5e-88 M NlpC/P60 family
LIEMIIIA_01945 2.2e-88 gmk2 2.7.4.8 F Guanylate kinase homologues.
LIEMIIIA_01946 3.9e-42
LIEMIIIA_01947 2.9e-279 S O-antigen ligase like membrane protein
LIEMIIIA_01948 3.3e-112
LIEMIIIA_01949 1.4e-30
LIEMIIIA_01950 4.1e-124 thiN 2.7.6.2 H thiamine pyrophosphokinase
LIEMIIIA_01951 2.9e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
LIEMIIIA_01952 4.5e-163 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
LIEMIIIA_01953 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
LIEMIIIA_01954 1.1e-138 stp 3.1.3.16 T phosphatase
LIEMIIIA_01955 1.6e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LIEMIIIA_01956 3.8e-44 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LIEMIIIA_01957 5.5e-116 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LIEMIIIA_01958 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LIEMIIIA_01959 1.1e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
LIEMIIIA_01960 2.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
LIEMIIIA_01961 1.1e-77 6.3.3.2 S ASCH
LIEMIIIA_01962 2.6e-300 recN L May be involved in recombinational repair of damaged DNA
LIEMIIIA_01963 2.3e-153 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
LIEMIIIA_01964 1e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
LIEMIIIA_01965 3.7e-35 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LIEMIIIA_01966 2.9e-193 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LIEMIIIA_01967 6.7e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LIEMIIIA_01968 4.7e-28 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LIEMIIIA_01969 3.5e-70 yebR 1.8.4.14 T GAF domain-containing protein
LIEMIIIA_01971 1.6e-08
LIEMIIIA_01972 1.4e-83 K FR47-like protein
LIEMIIIA_01973 1.1e-297 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
LIEMIIIA_01974 2e-194 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LIEMIIIA_01975 2.2e-165 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
LIEMIIIA_01976 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LIEMIIIA_01977 2.6e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
LIEMIIIA_01978 1.8e-62 yabR J S1 RNA binding domain
LIEMIIIA_01979 6.8e-60 divIC D Septum formation initiator
LIEMIIIA_01980 2.1e-78 2.7.13.3 T GHKL domain
LIEMIIIA_01981 2.9e-79 K LytTr DNA-binding domain
LIEMIIIA_01982 8.7e-30 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
LIEMIIIA_01983 3.4e-129 S (CBS) domain
LIEMIIIA_01984 1.5e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
LIEMIIIA_01985 5.1e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
LIEMIIIA_01986 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LIEMIIIA_01987 7.4e-40 yabO J S4 domain protein
LIEMIIIA_01989 7.8e-140 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
LIEMIIIA_01990 7.5e-103 G Phosphoglycerate mutase family
LIEMIIIA_01991 2.7e-151 I alpha/beta hydrolase fold
LIEMIIIA_01992 2e-129 hipB K Helix-turn-helix
LIEMIIIA_01993 1.4e-15 S cog cog1373
LIEMIIIA_01994 1e-30 S cog cog1373
LIEMIIIA_01995 7.6e-91 F Nucleoside 2-deoxyribosyltransferase
LIEMIIIA_01996 3.3e-261 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
LIEMIIIA_01997 4.2e-101 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
LIEMIIIA_01998 2.5e-86 K GNAT family
LIEMIIIA_01999 2.7e-202 XK27_00915 C Luciferase-like monooxygenase
LIEMIIIA_02000 4.7e-36 rbtT P Major Facilitator Superfamily
LIEMIIIA_02001 1.9e-75 M LysM domain
LIEMIIIA_02002 1.3e-42
LIEMIIIA_02004 4.9e-35
LIEMIIIA_02005 4.5e-76 yniG EGP Major facilitator Superfamily
LIEMIIIA_02006 5.4e-237 L transposase, IS605 OrfB family
LIEMIIIA_02007 1.4e-109 yniG EGP Major facilitator Superfamily
LIEMIIIA_02008 2.4e-128 S cog cog1373

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)