ORF_ID e_value Gene_name EC_number CAZy COGs Description
LINMIGPD_00001 6.1e-269 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
LINMIGPD_00002 1.2e-127 K LytTr DNA-binding domain
LINMIGPD_00003 4.4e-138 2.7.13.3 T GHKL domain
LINMIGPD_00004 1.2e-16
LINMIGPD_00005 2.1e-255 S Archaea bacterial proteins of unknown function
LINMIGPD_00006 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
LINMIGPD_00007 3e-270 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
LINMIGPD_00008 1e-24
LINMIGPD_00009 9.5e-26
LINMIGPD_00010 2.5e-33
LINMIGPD_00011 1.4e-53 S Enterocin A Immunity
LINMIGPD_00012 8e-145 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
LINMIGPD_00013 5.5e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LINMIGPD_00014 1.5e-206 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
LINMIGPD_00015 9.6e-121 K response regulator
LINMIGPD_00017 0.0 V ABC transporter
LINMIGPD_00018 4.2e-144 V ABC transporter, ATP-binding protein
LINMIGPD_00019 1.2e-145 V ABC transporter, ATP-binding protein
LINMIGPD_00020 3.8e-137 XK27_01040 S Protein of unknown function (DUF1129)
LINMIGPD_00021 3.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
LINMIGPD_00022 9.6e-45 yyzM S Bacterial protein of unknown function (DUF951)
LINMIGPD_00023 1.5e-153 spo0J K Belongs to the ParB family
LINMIGPD_00024 3.4e-138 soj D Sporulation initiation inhibitor
LINMIGPD_00025 2.8e-123 noc K Belongs to the ParB family
LINMIGPD_00026 1.2e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
LINMIGPD_00027 3e-53 cvpA S Colicin V production protein
LINMIGPD_00029 2.5e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
LINMIGPD_00030 6e-151 3.1.3.48 T Tyrosine phosphatase family
LINMIGPD_00031 2e-97 azr 1.5.1.36 S NADPH-dependent FMN reductase
LINMIGPD_00032 6.4e-96 nqr 1.5.1.36 S NADPH-dependent FMN reductase
LINMIGPD_00033 2.4e-110 K WHG domain
LINMIGPD_00034 3e-37
LINMIGPD_00035 3.4e-126 1.3.5.4 C FAD binding domain
LINMIGPD_00036 1.7e-213 1.3.5.4 C FAD binding domain
LINMIGPD_00037 2e-49 L PFAM transposase, IS4 family protein
LINMIGPD_00038 3.7e-243 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
LINMIGPD_00039 5e-48 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
LINMIGPD_00040 6.9e-116 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
LINMIGPD_00041 9.7e-52 S Iron-sulfur cluster assembly protein
LINMIGPD_00042 3.8e-154 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
LINMIGPD_00043 1.3e-122 sdaAB 4.3.1.17 E Serine dehydratase beta chain
LINMIGPD_00044 1.2e-196 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
LINMIGPD_00045 1.7e-287 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
LINMIGPD_00046 1.1e-220 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
LINMIGPD_00047 0.0 lacZ 3.2.1.23 G -beta-galactosidase
LINMIGPD_00048 2.6e-103 lacS G Transporter
LINMIGPD_00049 8.9e-207 lacS G Transporter
LINMIGPD_00050 5.4e-165 lacR K Transcriptional regulator
LINMIGPD_00051 7.2e-221 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
LINMIGPD_00052 9.3e-80 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
LINMIGPD_00053 2.1e-142 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
LINMIGPD_00054 5.3e-189 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
LINMIGPD_00055 7.6e-163 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
LINMIGPD_00056 2e-106 K Transcriptional regulator, AbiEi antitoxin
LINMIGPD_00057 1.2e-188 K Periplasmic binding protein-like domain
LINMIGPD_00058 4.4e-172 S Domain of unknown function (DUF389)
LINMIGPD_00059 6e-86
LINMIGPD_00060 5.9e-68 S Protein of unknown function (DUF3021)
LINMIGPD_00061 2.5e-140 V ABC transporter
LINMIGPD_00062 2e-106 S domain protein
LINMIGPD_00063 1.5e-141 msmE G Bacterial extracellular solute-binding protein
LINMIGPD_00064 1.7e-160 scrR K Periplasmic binding protein domain
LINMIGPD_00065 5.5e-36
LINMIGPD_00066 2.7e-36 yyaR K Acetyltransferase (GNAT) domain
LINMIGPD_00067 3.2e-72 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LINMIGPD_00068 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
LINMIGPD_00069 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LINMIGPD_00070 1.1e-152 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LINMIGPD_00071 2.3e-199 tnpB L Putative transposase DNA-binding domain
LINMIGPD_00072 4.2e-84 yqeG S HAD phosphatase, family IIIA
LINMIGPD_00073 4.4e-200 yqeH S Ribosome biogenesis GTPase YqeH
LINMIGPD_00074 4.4e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LINMIGPD_00075 6.6e-110 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
LINMIGPD_00076 5.3e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
LINMIGPD_00077 4.6e-216 ylbM S Belongs to the UPF0348 family
LINMIGPD_00078 4.7e-97 yceD S Uncharacterized ACR, COG1399
LINMIGPD_00079 1.2e-126 K response regulator
LINMIGPD_00080 1.3e-277 arlS 2.7.13.3 T Histidine kinase
LINMIGPD_00081 1e-12
LINMIGPD_00082 1.5e-97 S CAAX protease self-immunity
LINMIGPD_00083 6.1e-224 S SLAP domain
LINMIGPD_00084 5.7e-83 S Aminoacyl-tRNA editing domain
LINMIGPD_00085 2.4e-162 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LINMIGPD_00086 2.9e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
LINMIGPD_00087 2.2e-134 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LINMIGPD_00088 4.5e-58 yodB K Transcriptional regulator, HxlR family
LINMIGPD_00090 8.3e-24 papP P ABC transporter, permease protein
LINMIGPD_00091 1.6e-310 oppA E ABC transporter, substratebinding protein
LINMIGPD_00092 5e-301 oppA E ABC transporter, substratebinding protein
LINMIGPD_00093 1.3e-122 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
LINMIGPD_00094 4.6e-257 pepC 3.4.22.40 E aminopeptidase
LINMIGPD_00096 3.4e-53
LINMIGPD_00097 4.5e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LINMIGPD_00098 8.4e-265 S Fibronectin type III domain
LINMIGPD_00099 1.3e-235 G Bacterial extracellular solute-binding protein
LINMIGPD_00100 6.3e-212 S Uncharacterized protein conserved in bacteria (DUF2325)
LINMIGPD_00101 5.6e-86
LINMIGPD_00102 1.1e-164 S Protein of unknown function (DUF2974)
LINMIGPD_00103 4.7e-109 glnP P ABC transporter permease
LINMIGPD_00104 3.7e-90 gluC P ABC transporter permease
LINMIGPD_00105 1.2e-146 glnH ET ABC transporter substrate-binding protein
LINMIGPD_00106 4.8e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
LINMIGPD_00107 3.8e-46 udk 2.7.1.48 F Zeta toxin
LINMIGPD_00108 1e-44 udk 2.7.1.48 F Zeta toxin
LINMIGPD_00109 1e-246 G MFS/sugar transport protein
LINMIGPD_00110 1.6e-100 S ABC-type cobalt transport system, permease component
LINMIGPD_00111 0.0 V ABC transporter transmembrane region
LINMIGPD_00112 6.9e-309 XK27_09600 V ABC transporter, ATP-binding protein
LINMIGPD_00113 1.4e-80 K Transcriptional regulator, MarR family
LINMIGPD_00114 1.9e-147 glnH ET ABC transporter
LINMIGPD_00115 1.9e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
LINMIGPD_00116 8.6e-243 steT E amino acid
LINMIGPD_00117 2.4e-26 steT E amino acid
LINMIGPD_00118 2.8e-202 steT E amino acid
LINMIGPD_00119 2.7e-138
LINMIGPD_00120 5.9e-174 S Aldo keto reductase
LINMIGPD_00121 2.2e-311 ybiT S ABC transporter, ATP-binding protein
LINMIGPD_00122 4.7e-182 pepA E M42 glutamyl aminopeptidase
LINMIGPD_00123 0.0 1.3.5.4 C FAD binding domain
LINMIGPD_00124 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
LINMIGPD_00125 1.7e-249 yhdP S Transporter associated domain
LINMIGPD_00126 3.9e-119 C nitroreductase
LINMIGPD_00127 2.1e-39
LINMIGPD_00128 2.9e-87 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
LINMIGPD_00129 1.6e-80
LINMIGPD_00130 4.1e-147 glvR K Helix-turn-helix domain, rpiR family
LINMIGPD_00131 0.0 glvC 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
LINMIGPD_00132 5.4e-147 S hydrolase
LINMIGPD_00133 2e-160 rssA S Phospholipase, patatin family
LINMIGPD_00134 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
LINMIGPD_00135 3.1e-136 glcR K DeoR C terminal sensor domain
LINMIGPD_00136 2.5e-59 S Enterocin A Immunity
LINMIGPD_00137 1.2e-154 S hydrolase
LINMIGPD_00138 2.8e-134 ydhQ K UbiC transcription regulator-associated domain protein
LINMIGPD_00139 9.1e-175 rihB 3.2.2.1 F Nucleoside
LINMIGPD_00140 0.0 kup P Transport of potassium into the cell
LINMIGPD_00141 1e-125 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LINMIGPD_00142 3.5e-166 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LINMIGPD_00143 7.7e-162 2.7.7.12 C Domain of unknown function (DUF4931)
LINMIGPD_00144 3.4e-27
LINMIGPD_00145 8e-22 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
LINMIGPD_00146 5.4e-53 hipB K sequence-specific DNA binding
LINMIGPD_00147 4.8e-42 S SnoaL-like domain
LINMIGPD_00148 0.0 L PLD-like domain
LINMIGPD_00149 3.9e-97 D VirC1 protein
LINMIGPD_00151 5e-39 relB L RelB antitoxin
LINMIGPD_00152 1.6e-35 S Bacterial toxin of type II toxin-antitoxin system, YafQ
LINMIGPD_00153 5.6e-81 bcgIB 2.1.1.72, 3.1.21.3 V Type I restriction modification DNA specificity domain
LINMIGPD_00154 3.3e-241 V N-6 DNA Methylase
LINMIGPD_00156 2.3e-195 L Probable transposase
LINMIGPD_00157 5.7e-85 L Resolvase, N terminal domain
LINMIGPD_00159 2.2e-24 S CAAX protease self-immunity
LINMIGPD_00161 7.5e-134 topA2 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
LINMIGPD_00163 1.5e-102 GM NmrA-like family
LINMIGPD_00164 1.9e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LINMIGPD_00165 1.6e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
LINMIGPD_00166 9.1e-167 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
LINMIGPD_00167 7.2e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
LINMIGPD_00168 1.6e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
LINMIGPD_00169 8.8e-245 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
LINMIGPD_00170 6.4e-212 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
LINMIGPD_00171 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
LINMIGPD_00172 3.7e-250 lctP C L-lactate permease
LINMIGPD_00173 3.1e-148 glcU U sugar transport
LINMIGPD_00174 7.1e-46
LINMIGPD_00175 2.9e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
LINMIGPD_00176 2.7e-83 S Protein of unknown function (DUF1211)
LINMIGPD_00177 3.1e-113 ltrA S Bacterial low temperature requirement A protein (LtrA)
LINMIGPD_00178 2.8e-119 3.6.1.55 F NUDIX domain
LINMIGPD_00179 3e-246 brnQ U Component of the transport system for branched-chain amino acids
LINMIGPD_00180 4.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
LINMIGPD_00181 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
LINMIGPD_00182 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
LINMIGPD_00183 9.9e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
LINMIGPD_00184 1.4e-127 S Peptidase family M23
LINMIGPD_00185 4.8e-81 mutT 3.6.1.55 F NUDIX domain
LINMIGPD_00186 3.5e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
LINMIGPD_00187 1.4e-152 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LINMIGPD_00188 1.7e-240 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
LINMIGPD_00189 1.4e-60 yvoA_1 K Transcriptional regulator, GntR family
LINMIGPD_00190 9.6e-124 skfE V ATPases associated with a variety of cellular activities
LINMIGPD_00191 4.5e-141
LINMIGPD_00192 5.1e-137
LINMIGPD_00193 6.7e-145
LINMIGPD_00194 1.4e-26
LINMIGPD_00195 3.9e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
LINMIGPD_00196 7.5e-143
LINMIGPD_00197 9.7e-169
LINMIGPD_00198 8.3e-265 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
LINMIGPD_00199 1.3e-116 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
LINMIGPD_00200 6.9e-184 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
LINMIGPD_00201 2.1e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
LINMIGPD_00202 1.4e-178 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
LINMIGPD_00203 4.8e-136 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
LINMIGPD_00204 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
LINMIGPD_00205 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
LINMIGPD_00206 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
LINMIGPD_00207 9.2e-89 ypmB S Protein conserved in bacteria
LINMIGPD_00208 1.5e-260 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
LINMIGPD_00209 1.3e-114 dnaD L DnaD domain protein
LINMIGPD_00210 6.1e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LINMIGPD_00211 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
LINMIGPD_00212 4.5e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
LINMIGPD_00213 1e-107 ypsA S Belongs to the UPF0398 family
LINMIGPD_00214 1.1e-68 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
LINMIGPD_00215 3.6e-218 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
LINMIGPD_00216 1e-242 cpdA S Calcineurin-like phosphoesterase
LINMIGPD_00217 3.4e-79
LINMIGPD_00218 1.9e-115 rdgB 3.6.1.66, 5.1.1.3 F Ham1 family
LINMIGPD_00219 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
LINMIGPD_00220 2.3e-245 ynbB 4.4.1.1 P aluminum resistance
LINMIGPD_00221 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
LINMIGPD_00222 1.7e-284 E Amino acid permease
LINMIGPD_00223 6.3e-93 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
LINMIGPD_00224 1.4e-272 pepV 3.5.1.18 E dipeptidase PepV
LINMIGPD_00225 1.4e-115 mmuP E amino acid
LINMIGPD_00226 5e-13 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
LINMIGPD_00227 1e-63 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LINMIGPD_00228 3e-66 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LINMIGPD_00229 3.1e-150 xerD L Phage integrase, N-terminal SAM-like domain
LINMIGPD_00230 1.8e-98 L Helix-turn-helix domain
LINMIGPD_00231 5.3e-139 L hmm pf00665
LINMIGPD_00232 2.9e-15 M LysM domain protein
LINMIGPD_00233 3.8e-48 M LysM domain protein
LINMIGPD_00234 1.4e-86 C Aldo keto reductase
LINMIGPD_00235 4.8e-181 lacX 5.1.3.3 G Aldose 1-epimerase
LINMIGPD_00236 8.2e-236 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
LINMIGPD_00237 1.9e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
LINMIGPD_00238 5e-141 xerC D Phage integrase, N-terminal SAM-like domain
LINMIGPD_00239 1.4e-248 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
LINMIGPD_00240 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LINMIGPD_00241 5.8e-152 dprA LU DNA protecting protein DprA
LINMIGPD_00242 4.6e-132 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LINMIGPD_00243 2.8e-154 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LINMIGPD_00244 1.9e-94 yjcE P Sodium proton antiporter
LINMIGPD_00245 1.5e-40 yjcE P Sodium proton antiporter
LINMIGPD_00246 1.1e-66 yjcE P NhaP-type Na H and K H
LINMIGPD_00247 7.1e-36 yozE S Belongs to the UPF0346 family
LINMIGPD_00248 5.7e-147 DegV S Uncharacterised protein, DegV family COG1307
LINMIGPD_00249 1.2e-107 hlyIII S protein, hemolysin III
LINMIGPD_00250 1.1e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
LINMIGPD_00251 4.6e-160 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
LINMIGPD_00252 4.3e-86 3.4.21.96 S SLAP domain
LINMIGPD_00253 8.4e-128 yagE E Amino acid permease
LINMIGPD_00254 9.7e-65 yagE E amino acid
LINMIGPD_00255 6.8e-156 ypbG 2.7.1.2 GK ROK family
LINMIGPD_00256 3.1e-137 L An automated process has identified a potential problem with this gene model
LINMIGPD_00257 1.8e-73 C nitroreductase
LINMIGPD_00258 5.1e-11 S Domain of unknown function (DUF4767)
LINMIGPD_00259 3.6e-39 C FMN_bind
LINMIGPD_00260 1.5e-81
LINMIGPD_00261 1.3e-176 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
LINMIGPD_00262 2e-85 alkD L DNA alkylation repair enzyme
LINMIGPD_00263 3.5e-290 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LINMIGPD_00264 6.4e-128 K UTRA domain
LINMIGPD_00265 1e-54 celA1 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
LINMIGPD_00266 8.7e-60 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
LINMIGPD_00267 4.3e-24 S SLAP domain
LINMIGPD_00268 7.6e-25 S SLAP domain
LINMIGPD_00269 1.7e-41 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
LINMIGPD_00270 1.2e-140 haeIIIM 2.1.1.37 L C-5 cytosine-specific DNA methylase
LINMIGPD_00271 2.6e-81 L NgoPII restriction endonuclease
LINMIGPD_00272 1.1e-202 L Belongs to the 'phage' integrase family
LINMIGPD_00273 3.4e-25
LINMIGPD_00274 4.8e-61
LINMIGPD_00275 7.2e-144 S Replication initiation factor
LINMIGPD_00276 3.3e-141 D Ftsk spoiiie family protein
LINMIGPD_00277 3.3e-87
LINMIGPD_00278 7.4e-74
LINMIGPD_00279 3.9e-131 K Helix-turn-helix XRE-family like proteins
LINMIGPD_00281 9.2e-119 yhiD S MgtC family
LINMIGPD_00282 4.7e-227 I Protein of unknown function (DUF2974)
LINMIGPD_00283 1.4e-16
LINMIGPD_00285 6.7e-167 scrK 2.7.1.2, 2.7.1.4 GK ROK family
LINMIGPD_00286 4.2e-135 V ABC transporter transmembrane region
LINMIGPD_00287 3.7e-168 degV S DegV family
LINMIGPD_00288 2.3e-165 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
LINMIGPD_00289 6.7e-254 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
LINMIGPD_00290 5.7e-69 rplI J Binds to the 23S rRNA
LINMIGPD_00291 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
LINMIGPD_00292 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LINMIGPD_00293 2.7e-75 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
LINMIGPD_00294 5.5e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
LINMIGPD_00295 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LINMIGPD_00296 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LINMIGPD_00297 4e-209 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LINMIGPD_00298 2.6e-35 yaaA S S4 domain protein YaaA
LINMIGPD_00299 3.1e-185 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
LINMIGPD_00300 9.5e-245 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LINMIGPD_00301 1.9e-22 K Putative DNA-binding domain
LINMIGPD_00302 7.6e-239 pyrP F Permease
LINMIGPD_00303 8.8e-90 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
LINMIGPD_00304 9.2e-262 emrY EGP Major facilitator Superfamily
LINMIGPD_00305 3.6e-120 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
LINMIGPD_00306 1.3e-79 ybbH_2 K Helix-turn-helix domain, rpiR family
LINMIGPD_00307 8.5e-260 qacA EGP Major facilitator Superfamily
LINMIGPD_00308 1.7e-221 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LINMIGPD_00311 6.2e-165 psaA P Belongs to the bacterial solute-binding protein 9 family
LINMIGPD_00313 7.4e-40 yabO J S4 domain protein
LINMIGPD_00314 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LINMIGPD_00315 5.1e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
LINMIGPD_00316 1.5e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
LINMIGPD_00317 3.4e-129 S (CBS) domain
LINMIGPD_00318 8.2e-85 scrR K Periplasmic binding protein domain
LINMIGPD_00319 0.0 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
LINMIGPD_00320 1.5e-206 L Transposase DDE domain
LINMIGPD_00321 7e-87 gtcA S Teichoic acid glycosylation protein
LINMIGPD_00322 4.1e-80 fld C Flavodoxin
LINMIGPD_00323 1.4e-163 map 3.4.11.18 E Methionine Aminopeptidase
LINMIGPD_00324 3.6e-163 yihY S Belongs to the UPF0761 family
LINMIGPD_00325 2.1e-168 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
LINMIGPD_00326 2.5e-214 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
LINMIGPD_00327 3.6e-215 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
LINMIGPD_00328 7.8e-10 3.6.3.2, 3.6.3.6 P cation transport ATPase
LINMIGPD_00329 4.4e-35 3.6.3.2, 3.6.3.6 P cation transport ATPase
LINMIGPD_00330 2.5e-264 3.6.3.6 P Cation transporter/ATPase, N-terminus
LINMIGPD_00331 1.9e-19
LINMIGPD_00332 1.1e-282 phoR 2.7.13.3 T Histidine kinase
LINMIGPD_00333 9.5e-121 T Transcriptional regulatory protein, C terminal
LINMIGPD_00334 1.4e-105 phoU P Plays a role in the regulation of phosphate uptake
LINMIGPD_00335 1.3e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LINMIGPD_00336 1.2e-152 pstA P Phosphate transport system permease protein PstA
LINMIGPD_00337 1.1e-159 pstC P probably responsible for the translocation of the substrate across the membrane
LINMIGPD_00338 4.2e-145 pstS P Phosphate
LINMIGPD_00339 1.3e-30
LINMIGPD_00340 1.4e-191 oppA E ABC transporter, substratebinding protein
LINMIGPD_00341 4.7e-275 ytgP S Polysaccharide biosynthesis protein
LINMIGPD_00342 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
LINMIGPD_00343 1.1e-121 3.6.1.27 I Acid phosphatase homologues
LINMIGPD_00344 2.8e-168 K LysR substrate binding domain
LINMIGPD_00345 2.3e-84 3.6.4.12 S PD-(D/E)XK nuclease family transposase
LINMIGPD_00346 6.2e-43 1.3.5.4 C FAD binding domain
LINMIGPD_00347 2.4e-231 ndh 1.6.99.3 C NADH dehydrogenase
LINMIGPD_00348 1.1e-161 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
LINMIGPD_00349 5.3e-173 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
LINMIGPD_00350 2.2e-128 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
LINMIGPD_00351 1.9e-269 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LINMIGPD_00352 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
LINMIGPD_00353 8.2e-177 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
LINMIGPD_00354 1.5e-272 cydA 1.10.3.14 C ubiquinol oxidase
LINMIGPD_00355 3.7e-130 ybbH_2 K rpiR family
LINMIGPD_00356 3.4e-195 S Bacterial protein of unknown function (DUF871)
LINMIGPD_00357 4.1e-214 2.7.1.208, 2.7.1.211 G phosphotransferase system
LINMIGPD_00358 1.8e-119 S Putative esterase
LINMIGPD_00359 1e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LINMIGPD_00360 1.6e-161 htrA 3.4.21.107 O serine protease
LINMIGPD_00361 4.1e-147 vicX 3.1.26.11 S domain protein
LINMIGPD_00362 3.4e-149 yycI S YycH protein
LINMIGPD_00363 1.6e-257 yycH S YycH protein
LINMIGPD_00364 2.2e-305 vicK 2.7.13.3 T Histidine kinase
LINMIGPD_00365 4.8e-131 K response regulator
LINMIGPD_00367 4.9e-34
LINMIGPD_00369 1.6e-148 arbV 2.3.1.51 I Acyl-transferase
LINMIGPD_00370 3.3e-155 arbx M Glycosyl transferase family 8
LINMIGPD_00371 5e-184 arbY M Glycosyl transferase family 8
LINMIGPD_00372 1.6e-182 arbY M Glycosyl transferase family 8
LINMIGPD_00373 6e-168 arbZ I Phosphate acyltransferases
LINMIGPD_00374 1.4e-36 S Cytochrome B5
LINMIGPD_00375 9.5e-82 XK27_04435 3.5.4.5 J FR47-like protein
LINMIGPD_00376 2e-10 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
LINMIGPD_00378 7.8e-140 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
LINMIGPD_00379 7.5e-103 G Phosphoglycerate mutase family
LINMIGPD_00380 6.5e-154 pstA P Phosphate transport system permease protein PstA
LINMIGPD_00381 5e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LINMIGPD_00382 3.9e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LINMIGPD_00383 2.2e-117 phoU P Plays a role in the regulation of phosphate uptake
LINMIGPD_00384 2.8e-90 L An automated process has identified a potential problem with this gene model
LINMIGPD_00385 6.6e-12 GT2,GT4 M family 8
LINMIGPD_00386 7e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LINMIGPD_00387 1.8e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
LINMIGPD_00388 8.7e-140 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
LINMIGPD_00389 1.3e-116 rsmC 2.1.1.172 J Methyltransferase
LINMIGPD_00390 9e-26
LINMIGPD_00391 2.2e-90 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
LINMIGPD_00392 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LINMIGPD_00393 5.7e-106 2.4.1.58 GT8 M family 8
LINMIGPD_00394 1.2e-35 M lipopolysaccharide 3-alpha-galactosyltransferase activity
LINMIGPD_00395 8.2e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LINMIGPD_00396 1.6e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LINMIGPD_00397 1.1e-34 S Protein of unknown function (DUF2508)
LINMIGPD_00398 1.6e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LINMIGPD_00399 8.9e-53 yaaQ S Cyclic-di-AMP receptor
LINMIGPD_00400 1.5e-155 holB 2.7.7.7 L DNA polymerase III
LINMIGPD_00401 1.8e-59 yabA L Involved in initiation control of chromosome replication
LINMIGPD_00402 5.1e-156 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LINMIGPD_00403 1.4e-130 fat 3.1.2.21 I Acyl-ACP thioesterase
LINMIGPD_00404 6.4e-85 S ECF transporter, substrate-specific component
LINMIGPD_00405 2.4e-133 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
LINMIGPD_00406 7.4e-97 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
LINMIGPD_00407 8.4e-193 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LINMIGPD_00408 1.9e-245 L Transposase IS66 family
LINMIGPD_00409 8.7e-34 S Transposase C of IS166 homeodomain
LINMIGPD_00410 9.3e-64 L PFAM IS66 Orf2 family protein
LINMIGPD_00411 7.7e-22
LINMIGPD_00412 7e-43 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
LINMIGPD_00413 6.6e-182 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
LINMIGPD_00414 3.4e-284 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
LINMIGPD_00415 0.0 uup S ABC transporter, ATP-binding protein
LINMIGPD_00416 5.8e-112 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
LINMIGPD_00417 7.3e-66 K LytTr DNA-binding domain
LINMIGPD_00418 1.2e-49 S Protein of unknown function (DUF3021)
LINMIGPD_00419 6.3e-105 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
LINMIGPD_00420 1.9e-118 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
LINMIGPD_00421 6e-132 S membrane transporter protein
LINMIGPD_00422 3.7e-125 gpmB G Belongs to the phosphoglycerate mutase family
LINMIGPD_00423 1.9e-161 czcD P cation diffusion facilitator family transporter
LINMIGPD_00424 1.4e-23
LINMIGPD_00425 1.2e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LINMIGPD_00426 1.1e-183 S AAA domain
LINMIGPD_00427 3.9e-267 pepC 3.4.22.40 E Peptidase C1-like family
LINMIGPD_00428 4.1e-52
LINMIGPD_00429 1.8e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
LINMIGPD_00430 2.7e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LINMIGPD_00431 1.6e-290 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LINMIGPD_00432 7.5e-277 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
LINMIGPD_00433 5.1e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
LINMIGPD_00434 1.7e-139 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LINMIGPD_00435 1.2e-94 sigH K Belongs to the sigma-70 factor family
LINMIGPD_00436 1.7e-34
LINMIGPD_00437 8.4e-287 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
LINMIGPD_00438 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LINMIGPD_00439 3.6e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
LINMIGPD_00440 1.2e-100 nusG K Participates in transcription elongation, termination and antitermination
LINMIGPD_00441 1.2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LINMIGPD_00442 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
LINMIGPD_00443 2.8e-157 pstS P Phosphate
LINMIGPD_00444 2.6e-162 pstC P probably responsible for the translocation of the substrate across the membrane
LINMIGPD_00445 5.8e-78 M LysM domain protein
LINMIGPD_00446 4.7e-86 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LINMIGPD_00447 5.4e-125 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LINMIGPD_00448 6.2e-12
LINMIGPD_00449 4e-172 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
LINMIGPD_00450 4.6e-31
LINMIGPD_00452 2.9e-69 S Iron-sulphur cluster biosynthesis
LINMIGPD_00453 1.3e-113 yncA 2.3.1.79 S Maltose acetyltransferase
LINMIGPD_00454 6.9e-58 psiE S Phosphate-starvation-inducible E
LINMIGPD_00456 4.4e-135 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
LINMIGPD_00457 1.6e-227 amtB P ammonium transporter
LINMIGPD_00458 1.4e-60
LINMIGPD_00459 0.0 lhr L DEAD DEAH box helicase
LINMIGPD_00460 1.4e-245 P P-loop Domain of unknown function (DUF2791)
LINMIGPD_00461 2.6e-138 S TerB-C domain
LINMIGPD_00462 4.5e-68 S Domain of unknown function (DUF1934)
LINMIGPD_00463 1.8e-47 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
LINMIGPD_00464 2.7e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
LINMIGPD_00465 1.4e-245 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LINMIGPD_00466 2.1e-80 K acetyltransferase
LINMIGPD_00467 1.3e-47 adk 2.7.4.3 F AAA domain
LINMIGPD_00468 4.4e-285 pipD E Dipeptidase
LINMIGPD_00469 2.5e-152 msmR K AraC-like ligand binding domain
LINMIGPD_00470 1.4e-226 pbuX F xanthine permease
LINMIGPD_00471 3.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
LINMIGPD_00472 2.4e-43 K Helix-turn-helix
LINMIGPD_00473 7.8e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
LINMIGPD_00475 4.9e-99 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
LINMIGPD_00476 4.3e-116 3.2.1.18 GH33 M Rib/alpha-like repeat
LINMIGPD_00477 5e-184 3.2.1.18 GH33 M Rib/alpha-like repeat
LINMIGPD_00478 4.2e-63 lmrB EGP Major facilitator Superfamily
LINMIGPD_00479 2.9e-122 rbtT P Major Facilitator Superfamily
LINMIGPD_00480 2.7e-202 XK27_00915 C Luciferase-like monooxygenase
LINMIGPD_00481 2.5e-86 K GNAT family
LINMIGPD_00482 1.4e-124 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
LINMIGPD_00484 4.3e-36
LINMIGPD_00485 6.2e-288 P ABC transporter
LINMIGPD_00486 2.3e-07 V ABC-type multidrug transport system, ATPase and permease components
LINMIGPD_00487 4.4e-103 K Putative DNA-binding domain
LINMIGPD_00488 9.3e-35
LINMIGPD_00489 2e-157 S reductase
LINMIGPD_00490 5.8e-85 2.3.1.128 K Acetyltransferase (GNAT) domain
LINMIGPD_00491 2e-216 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
LINMIGPD_00493 4.7e-249 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LINMIGPD_00494 2.8e-211 yfmL 3.6.4.13 L DEAD DEAH box helicase
LINMIGPD_00495 1.3e-61 M Glycosyl hydrolases family 25
LINMIGPD_00496 2.6e-61 M Glycosyl hydrolases family 25
LINMIGPD_00497 5.6e-191 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
LINMIGPD_00499 3.4e-178 MA20_14895 S Conserved hypothetical protein 698
LINMIGPD_00500 1.1e-83 dps P Belongs to the Dps family
LINMIGPD_00501 3.8e-20 1.3.5.4 C FAD dependent oxidoreductase
LINMIGPD_00502 5.6e-101 yihX 3.1.3.10, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
LINMIGPD_00503 1.8e-58 S Putative adhesin
LINMIGPD_00504 3.5e-71 yjaB 2.3.1.181 K Acetyltransferase (GNAT) domain
LINMIGPD_00505 2e-234 mepA V MATE efflux family protein
LINMIGPD_00506 4.7e-159 D nuclear chromosome segregation
LINMIGPD_00507 1.2e-105 G Phosphoglycerate mutase family
LINMIGPD_00508 2.6e-89 G Histidine phosphatase superfamily (branch 1)
LINMIGPD_00509 6.6e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
LINMIGPD_00510 1.2e-115 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
LINMIGPD_00512 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
LINMIGPD_00514 6.5e-210 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
LINMIGPD_00515 1.8e-184 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
LINMIGPD_00516 8.1e-120 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
LINMIGPD_00517 4.4e-144 K SIS domain
LINMIGPD_00518 6.7e-228 slpX S SLAP domain
LINMIGPD_00519 1.3e-22 3.6.4.12 S transposase or invertase
LINMIGPD_00520 6.6e-11
LINMIGPD_00521 3.2e-240 npr 1.11.1.1 C NADH oxidase
LINMIGPD_00524 4.4e-239 oppA2 E ABC transporter, substratebinding protein
LINMIGPD_00525 3.4e-45 oppA2 E ABC transporter, substratebinding protein
LINMIGPD_00526 3.3e-179
LINMIGPD_00527 4.6e-123 gntR1 K UTRA
LINMIGPD_00528 5.1e-71 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
LINMIGPD_00529 2.1e-134 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
LINMIGPD_00530 1.7e-204 csaB M Glycosyl transferases group 1
LINMIGPD_00531 7.7e-285 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LINMIGPD_00532 1.2e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
LINMIGPD_00533 1.4e-204 tnpB L Putative transposase DNA-binding domain
LINMIGPD_00534 0.0 pacL 3.6.3.8 P P-type ATPase
LINMIGPD_00535 7e-225 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
LINMIGPD_00536 3e-257 epsU S Polysaccharide biosynthesis protein
LINMIGPD_00537 3.8e-133 M Glycosyltransferase sugar-binding region containing DXD motif
LINMIGPD_00538 4.1e-83 ydcK S Belongs to the SprT family
LINMIGPD_00540 5.2e-84 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
LINMIGPD_00541 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
LINMIGPD_00542 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LINMIGPD_00543 5.4e-201 camS S sex pheromone
LINMIGPD_00544 1.5e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LINMIGPD_00545 5.2e-270 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
LINMIGPD_00546 4.1e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LINMIGPD_00547 7.2e-172 yegS 2.7.1.107 G Lipid kinase
LINMIGPD_00548 4.3e-108 ybhL S Belongs to the BI1 family
LINMIGPD_00549 2.6e-57
LINMIGPD_00550 1.4e-147 I transferase activity, transferring acyl groups other than amino-acyl groups
LINMIGPD_00551 2.8e-244 nhaC C Na H antiporter NhaC
LINMIGPD_00552 6.3e-201 pbpX V Beta-lactamase
LINMIGPD_00553 4.9e-254 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LINMIGPD_00554 1.1e-94 MA20_25245 K Acetyltransferase (GNAT) domain
LINMIGPD_00559 8.5e-260 emrY EGP Major facilitator Superfamily
LINMIGPD_00560 2e-91 yxdD K Bacterial regulatory proteins, tetR family
LINMIGPD_00561 0.0 4.2.1.53 S Myosin-crossreactive antigen
LINMIGPD_00562 5.5e-148 S cog cog1373
LINMIGPD_00563 5.7e-18
LINMIGPD_00564 1.5e-239 G Bacterial extracellular solute-binding protein
LINMIGPD_00565 1e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
LINMIGPD_00566 7.7e-238 XK27_01810 S Calcineurin-like phosphoesterase
LINMIGPD_00568 0.0 S SLAP domain
LINMIGPD_00569 0.0 hsdR 3.1.21.3 L DEAD/DEAH box helicase
LINMIGPD_00570 1.2e-164 S AAA domain, putative AbiEii toxin, Type IV TA system
LINMIGPD_00571 3.4e-42 S RloB-like protein
LINMIGPD_00572 1.9e-259 hsdM 2.1.1.72 V type I restriction-modification system
LINMIGPD_00573 1.9e-37 hsdM 2.1.1.72 V HsdM N-terminal domain
LINMIGPD_00574 1.2e-63 S SIR2-like domain
LINMIGPD_00575 3.2e-10 S Domain of unknown function DUF87
LINMIGPD_00576 1e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LINMIGPD_00577 1.7e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
LINMIGPD_00578 4e-249 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
LINMIGPD_00579 8e-260 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
LINMIGPD_00580 2.5e-39 rpmE2 J Ribosomal protein L31
LINMIGPD_00581 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
LINMIGPD_00582 2.6e-157 S Sucrose-6F-phosphate phosphohydrolase
LINMIGPD_00583 9.5e-297 ybeC E amino acid
LINMIGPD_00584 6.4e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
LINMIGPD_00585 2.1e-42
LINMIGPD_00586 1.4e-51
LINMIGPD_00587 1.4e-184 5.3.3.2 C FMN-dependent dehydrogenase
LINMIGPD_00588 1.3e-141 yfeO P Voltage gated chloride channel
LINMIGPD_00589 2.2e-142 S Belongs to the UPF0246 family
LINMIGPD_00590 4.1e-141 aroD S Alpha/beta hydrolase family
LINMIGPD_00591 3.5e-111 G phosphoglycerate mutase
LINMIGPD_00592 3.2e-92 ygfC K Bacterial regulatory proteins, tetR family
LINMIGPD_00593 3.3e-176 hrtB V ABC transporter permease
LINMIGPD_00594 1.7e-101 devA 3.6.3.25 V ABC transporter, ATP-binding protein
LINMIGPD_00595 1.3e-273 pipD E Dipeptidase
LINMIGPD_00596 2.6e-65 C 2Fe-2S iron-sulfur cluster binding domain
LINMIGPD_00597 4.1e-156 crtI 1.3.99.23, 5.2.1.13 Q HI0933-like protein
LINMIGPD_00598 4.3e-52 K helix_turn_helix gluconate operon transcriptional repressor
LINMIGPD_00599 7.2e-183 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
LINMIGPD_00600 3.8e-115 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
LINMIGPD_00601 1e-20
LINMIGPD_00602 1.6e-73 marR K Transcriptional regulator, MarR family
LINMIGPD_00603 1.3e-48 4.2.1.59 I 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LINMIGPD_00604 1.1e-86 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LINMIGPD_00605 2.9e-38 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LINMIGPD_00606 2.1e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
LINMIGPD_00607 1.7e-139 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
LINMIGPD_00608 2.9e-107 IQ reductase
LINMIGPD_00609 4e-210 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
LINMIGPD_00610 2.2e-49 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
LINMIGPD_00611 9.2e-61 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
LINMIGPD_00612 9.6e-237 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
LINMIGPD_00613 3.3e-139 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
LINMIGPD_00614 1.1e-128 accA 2.1.3.15, 6.4.1.2 I alpha subunit
LINMIGPD_00615 1.9e-122 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
LINMIGPD_00616 3e-80 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
LINMIGPD_00617 1.2e-191 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LINMIGPD_00620 1.8e-158 xth 3.1.11.2 L exodeoxyribonuclease III
LINMIGPD_00621 1.1e-272 E amino acid
LINMIGPD_00622 0.0 L Helicase C-terminal domain protein
LINMIGPD_00623 4.8e-205 pbpX1 V Beta-lactamase
LINMIGPD_00624 5.1e-226 N Uncharacterized conserved protein (DUF2075)
LINMIGPD_00625 1.4e-69 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
LINMIGPD_00626 6.9e-47 mdtG EGP Major facilitator Superfamily
LINMIGPD_00627 1.7e-152 mdtG EGP Major facilitator Superfamily
LINMIGPD_00628 1.3e-174
LINMIGPD_00629 2.8e-47 lysM M LysM domain
LINMIGPD_00630 0.0 pepN 3.4.11.2 E aminopeptidase
LINMIGPD_00631 1.3e-250 dtpT U amino acid peptide transporter
LINMIGPD_00632 1.2e-18 S Sugar efflux transporter for intercellular exchange
LINMIGPD_00633 6.6e-70 XK27_02470 K LytTr DNA-binding domain
LINMIGPD_00634 7.9e-92 liaI S membrane
LINMIGPD_00635 4e-16
LINMIGPD_00636 3.9e-186 S Putative peptidoglycan binding domain
LINMIGPD_00637 1.9e-157 2.7.7.12 C Domain of unknown function (DUF4931)
LINMIGPD_00638 9e-121
LINMIGPD_00639 5.6e-36
LINMIGPD_00640 3.3e-183 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LINMIGPD_00641 8.4e-125 luxT K Bacterial regulatory proteins, tetR family
LINMIGPD_00642 2.8e-135
LINMIGPD_00643 1.3e-258 glnPH2 P ABC transporter permease
LINMIGPD_00644 1.7e-131 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
LINMIGPD_00645 6.4e-224 S Cysteine-rich secretory protein family
LINMIGPD_00646 1.2e-205 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
LINMIGPD_00647 1.4e-112
LINMIGPD_00648 2.2e-202 yibE S overlaps another CDS with the same product name
LINMIGPD_00649 4.9e-129 yibF S overlaps another CDS with the same product name
LINMIGPD_00650 8.7e-145 I alpha/beta hydrolase fold
LINMIGPD_00651 0.0 G Belongs to the glycosyl hydrolase 31 family
LINMIGPD_00652 1.5e-214 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
LINMIGPD_00653 2e-75 S cog cog0433
LINMIGPD_00654 1.9e-110 F DNA/RNA non-specific endonuclease
LINMIGPD_00655 2.7e-34 S YSIRK type signal peptide
LINMIGPD_00657 5.5e-53
LINMIGPD_00658 1.8e-285 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
LINMIGPD_00659 8e-79 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LINMIGPD_00660 4.3e-169 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LINMIGPD_00661 1e-198 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
LINMIGPD_00662 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
LINMIGPD_00663 0.0 FbpA K Fibronectin-binding protein
LINMIGPD_00664 1.1e-66
LINMIGPD_00665 1.3e-159 degV S EDD domain protein, DegV family
LINMIGPD_00666 2.3e-305 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
LINMIGPD_00667 1.8e-203 xerS L Belongs to the 'phage' integrase family
LINMIGPD_00668 5e-65
LINMIGPD_00669 3.1e-110 XK27_00160 S Domain of unknown function (DUF5052)
LINMIGPD_00670 2.6e-211 M Glycosyl hydrolases family 25
LINMIGPD_00671 2e-39 S Transglycosylase associated protein
LINMIGPD_00672 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
LINMIGPD_00673 3.5e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
LINMIGPD_00674 8.4e-146 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LINMIGPD_00675 2.1e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
LINMIGPD_00676 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
LINMIGPD_00677 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
LINMIGPD_00678 9.5e-31
LINMIGPD_00679 6.2e-276 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LINMIGPD_00680 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
LINMIGPD_00681 2.6e-275 V ABC-type multidrug transport system, ATPase and permease components
LINMIGPD_00682 7.8e-52 V ABC-type multidrug transport system, ATPase and permease components
LINMIGPD_00683 3.4e-100 2.7.6.5 T Region found in RelA / SpoT proteins
LINMIGPD_00684 3.2e-105 K response regulator
LINMIGPD_00685 1.1e-103 sptS 2.7.13.3 T Histidine kinase
LINMIGPD_00686 2.6e-103 sptS 2.7.13.3 T Histidine kinase
LINMIGPD_00687 7.2e-209 EGP Major facilitator Superfamily
LINMIGPD_00688 2.3e-69 O OsmC-like protein
LINMIGPD_00689 2.2e-85 S Protein of unknown function (DUF805)
LINMIGPD_00690 2.2e-78
LINMIGPD_00691 3.1e-93
LINMIGPD_00692 9.9e-180
LINMIGPD_00693 5.8e-83 S Fic/DOC family
LINMIGPD_00694 3.3e-275 yjeM E Amino Acid
LINMIGPD_00695 1.1e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LINMIGPD_00697 1.8e-81 M NlpC/P60 family
LINMIGPD_00698 1.2e-131 cobQ S glutamine amidotransferase
LINMIGPD_00700 1.3e-64 L RelB antitoxin
LINMIGPD_00701 2.8e-76 V ABC transporter transmembrane region
LINMIGPD_00702 1.4e-223 L transposase, IS605 OrfB family
LINMIGPD_00703 3.1e-187 L COG2826 Transposase and inactivated derivatives, IS30 family
LINMIGPD_00704 4.1e-79 V ABC transporter transmembrane region
LINMIGPD_00705 1.7e-184 G Transmembrane secretion effector
LINMIGPD_00706 1.5e-144 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
LINMIGPD_00707 3.5e-293 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LINMIGPD_00708 1.4e-144 ptp2 3.1.3.48 T Tyrosine phosphatase family
LINMIGPD_00709 8.2e-179 yvdE K helix_turn _helix lactose operon repressor
LINMIGPD_00710 1.5e-214 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LINMIGPD_00711 1e-75 S PAS domain
LINMIGPD_00712 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
LINMIGPD_00713 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
LINMIGPD_00714 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
LINMIGPD_00715 9e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
LINMIGPD_00716 1.2e-208 msmX P Belongs to the ABC transporter superfamily
LINMIGPD_00717 1.3e-213 malE G Bacterial extracellular solute-binding protein
LINMIGPD_00718 1.1e-250 malF P Binding-protein-dependent transport system inner membrane component
LINMIGPD_00719 3.3e-147 malG P ABC transporter permease
LINMIGPD_00720 4.3e-67 K Helix-turn-helix XRE-family like proteins
LINMIGPD_00723 3.1e-14
LINMIGPD_00724 1.3e-51
LINMIGPD_00725 2.7e-57
LINMIGPD_00726 1.6e-11
LINMIGPD_00727 8.1e-126 S PAS domain
LINMIGPD_00728 1.1e-56 S Protein of unknown function (DUF3290)
LINMIGPD_00729 3e-116 yviA S Protein of unknown function (DUF421)
LINMIGPD_00730 5.8e-157 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LINMIGPD_00731 8e-182 dnaQ 2.7.7.7 L EXOIII
LINMIGPD_00732 1.9e-158 endA F DNA RNA non-specific endonuclease
LINMIGPD_00733 1.3e-281 pipD E Dipeptidase
LINMIGPD_00734 1.9e-203 malK P ATPases associated with a variety of cellular activities
LINMIGPD_00735 1.6e-157 gtsB P ABC-type sugar transport systems, permease components
LINMIGPD_00736 6.1e-146 gtsC P Binding-protein-dependent transport system inner membrane component
LINMIGPD_00737 9.2e-258 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
LINMIGPD_00738 2.3e-240 G Bacterial extracellular solute-binding protein
LINMIGPD_00739 1.8e-154 corA P CorA-like Mg2+ transporter protein
LINMIGPD_00740 3.3e-148 3.5.2.6 V Beta-lactamase enzyme family
LINMIGPD_00741 6.6e-99 yobS K Bacterial regulatory proteins, tetR family
LINMIGPD_00742 0.0 ydgH S MMPL family
LINMIGPD_00744 1.3e-25 K Acetyltransferase (GNAT) domain
LINMIGPD_00745 1.8e-163
LINMIGPD_00746 3.7e-93 sip L Belongs to the 'phage' integrase family
LINMIGPD_00747 6.2e-12
LINMIGPD_00748 5.6e-08 M Host cell surface-exposed lipoprotein
LINMIGPD_00749 2.4e-07 S Pfam:DUF955
LINMIGPD_00750 8.8e-22 K Helix-turn-helix XRE-family like proteins
LINMIGPD_00751 1.4e-17 K Helix-turn-helix XRE-family like proteins
LINMIGPD_00752 4.9e-94 S DNA binding
LINMIGPD_00758 1.8e-31 S Helix-turn-helix domain
LINMIGPD_00759 5.5e-18
LINMIGPD_00761 4.6e-45
LINMIGPD_00762 1.6e-128 S Protein of unknown function (DUF1351)
LINMIGPD_00763 5.3e-131 S ERF superfamily
LINMIGPD_00764 1.2e-100 L Helix-turn-helix domain
LINMIGPD_00768 1.6e-65 S ORF6C domain
LINMIGPD_00770 3.7e-37 S VRR_NUC
LINMIGPD_00772 3.3e-09 arpU S Phage transcriptional regulator, ArpU family
LINMIGPD_00774 3e-19 ps333 L Terminase small subunit
LINMIGPD_00775 1.1e-201 S Terminase-like family
LINMIGPD_00776 6.2e-135 S Protein of unknown function (DUF1073)
LINMIGPD_00777 1.3e-47 S Phage Mu protein F like protein
LINMIGPD_00778 5e-12 S Lysin motif
LINMIGPD_00779 1.6e-57 S Uncharacterized protein conserved in bacteria (DUF2213)
LINMIGPD_00780 4.1e-34
LINMIGPD_00781 2.4e-93 Z012_11565 S Uncharacterized protein conserved in bacteria (DUF2184)
LINMIGPD_00782 9.2e-20 S Protein of unknown function (DUF4054)
LINMIGPD_00783 1e-29
LINMIGPD_00784 1.6e-25
LINMIGPD_00785 4.3e-31
LINMIGPD_00786 3.5e-103 Z012_02110 S Protein of unknown function (DUF3383)
LINMIGPD_00787 9.3e-29
LINMIGPD_00788 2.9e-09
LINMIGPD_00790 1e-220 3.4.14.13 M Phage tail tape measure protein TP901
LINMIGPD_00791 3.8e-59 M LysM domain
LINMIGPD_00792 2.7e-46
LINMIGPD_00793 1.1e-102
LINMIGPD_00794 4.9e-39
LINMIGPD_00795 6.4e-31
LINMIGPD_00796 3e-114 Z012_12235 S Baseplate J-like protein
LINMIGPD_00797 2.9e-09
LINMIGPD_00798 2.3e-34
LINMIGPD_00801 3.2e-38
LINMIGPD_00802 1.1e-18 S Phage uncharacterised protein (Phage_XkdX)
LINMIGPD_00803 1.1e-07
LINMIGPD_00805 7.9e-19
LINMIGPD_00806 5e-29
LINMIGPD_00807 5.1e-172 M Glycosyl hydrolases family 25
LINMIGPD_00808 0.0 dnaE 2.7.7.7 L DNA polymerase
LINMIGPD_00809 2.3e-23 S Protein of unknown function (DUF2929)
LINMIGPD_00810 2.6e-310 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
LINMIGPD_00811 1.3e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
LINMIGPD_00812 1.5e-34 yrvD S Lipopolysaccharide assembly protein A domain
LINMIGPD_00813 5.1e-142 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
LINMIGPD_00814 5.4e-175 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
LINMIGPD_00815 2.2e-292 I Acyltransferase
LINMIGPD_00816 1.7e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LINMIGPD_00817 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
LINMIGPD_00818 6.8e-110 dedA 3.1.3.1 S SNARE associated Golgi protein
LINMIGPD_00819 1.1e-243 yfnA E Amino Acid
LINMIGPD_00820 2.6e-180 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LINMIGPD_00821 1.3e-148 yxeH S hydrolase
LINMIGPD_00822 2.7e-32 S reductase
LINMIGPD_00823 4.4e-39 S reductase
LINMIGPD_00824 4.8e-34 S reductase
LINMIGPD_00825 2.8e-216 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LINMIGPD_00826 3.6e-36 snf 2.7.11.1 KL domain protein
LINMIGPD_00827 2e-35
LINMIGPD_00829 3.8e-104 pncA Q Isochorismatase family
LINMIGPD_00830 4.9e-118
LINMIGPD_00833 3.6e-63
LINMIGPD_00834 1.4e-34
LINMIGPD_00835 1.9e-75 M LysM domain
LINMIGPD_00836 1.3e-42
LINMIGPD_00838 4.9e-35
LINMIGPD_00839 4.5e-76 yniG EGP Major facilitator Superfamily
LINMIGPD_00840 1.6e-236 L transposase, IS605 OrfB family
LINMIGPD_00841 1.4e-109 yniG EGP Major facilitator Superfamily
LINMIGPD_00842 2.4e-128 S cog cog1373
LINMIGPD_00843 9.9e-82 C Flavodoxin
LINMIGPD_00844 0.0 uvrA3 L excinuclease ABC, A subunit
LINMIGPD_00845 1.1e-189 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
LINMIGPD_00846 2.1e-114 3.6.1.27 I Acid phosphatase homologues
LINMIGPD_00847 7.4e-205 L COG2826 Transposase and inactivated derivatives, IS30 family
LINMIGPD_00848 1.9e-80 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LINMIGPD_00849 1.4e-115 lacA 2.3.1.79 S Transferase hexapeptide repeat
LINMIGPD_00850 9.3e-204 pbpX1 V Beta-lactamase
LINMIGPD_00851 2.8e-98 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
LINMIGPD_00852 7.5e-95 S ECF-type riboflavin transporter, S component
LINMIGPD_00853 1.3e-229 S Putative peptidoglycan binding domain
LINMIGPD_00854 9e-83 K Acetyltransferase (GNAT) domain
LINMIGPD_00855 2.2e-251 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
LINMIGPD_00856 1.9e-191 yrvN L AAA C-terminal domain
LINMIGPD_00857 8.2e-64 spxA_2 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
LINMIGPD_00858 3.3e-283 treB G phosphotransferase system
LINMIGPD_00859 1.2e-100 treR K UTRA
LINMIGPD_00860 1e-288 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
LINMIGPD_00861 1e-23 S Alpha beta hydrolase
LINMIGPD_00862 1.2e-63 S Alpha beta hydrolase
LINMIGPD_00863 2.5e-37
LINMIGPD_00864 7e-50
LINMIGPD_00865 1.7e-148 S haloacid dehalogenase-like hydrolase
LINMIGPD_00866 4.5e-291 V ABC-type multidrug transport system, ATPase and permease components
LINMIGPD_00867 2.9e-277 V ABC-type multidrug transport system, ATPase and permease components
LINMIGPD_00868 1.5e-64 arsC 1.20.4.1 P Belongs to the ArsC family
LINMIGPD_00869 8.5e-178 I Carboxylesterase family
LINMIGPD_00871 1e-205 M Glycosyl hydrolases family 25
LINMIGPD_00872 2.8e-157 cinI S Serine hydrolase (FSH1)
LINMIGPD_00873 4.3e-298 S Predicted membrane protein (DUF2207)
LINMIGPD_00874 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
LINMIGPD_00876 7.8e-255 S Uncharacterized protein conserved in bacteria (DUF2325)
LINMIGPD_00877 3.7e-151 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
LINMIGPD_00878 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
LINMIGPD_00879 1.3e-47 rpmA J Belongs to the bacterial ribosomal protein bL27 family
LINMIGPD_00880 1e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
LINMIGPD_00881 4.9e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LINMIGPD_00882 3.4e-71 yqhY S Asp23 family, cell envelope-related function
LINMIGPD_00883 1.1e-63 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LINMIGPD_00884 6.7e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LINMIGPD_00885 2.9e-193 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LINMIGPD_00886 3.7e-35 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LINMIGPD_00887 1e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
LINMIGPD_00888 2.3e-153 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
LINMIGPD_00889 2.6e-300 recN L May be involved in recombinational repair of damaged DNA
LINMIGPD_00890 1.1e-77 6.3.3.2 S ASCH
LINMIGPD_00891 2.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
LINMIGPD_00892 1.1e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
LINMIGPD_00893 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LINMIGPD_00894 5.7e-172 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LINMIGPD_00895 1.6e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LINMIGPD_00896 1.1e-138 stp 3.1.3.16 T phosphatase
LINMIGPD_00897 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
LINMIGPD_00898 4.5e-163 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
LINMIGPD_00899 2.9e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
LINMIGPD_00900 4.1e-124 thiN 2.7.6.2 H thiamine pyrophosphokinase
LINMIGPD_00901 1.4e-30
LINMIGPD_00902 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
LINMIGPD_00903 1.5e-56 asp S Asp23 family, cell envelope-related function
LINMIGPD_00904 7.6e-305 yloV S DAK2 domain fusion protein YloV
LINMIGPD_00905 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LINMIGPD_00906 3.7e-182 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
LINMIGPD_00907 4.9e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
LINMIGPD_00908 3.1e-192 oppD P Belongs to the ABC transporter superfamily
LINMIGPD_00909 1.5e-170 oppF P Belongs to the ABC transporter superfamily
LINMIGPD_00910 2.6e-172 oppB P ABC transporter permease
LINMIGPD_00911 5.6e-132 oppC P Binding-protein-dependent transport system inner membrane component
LINMIGPD_00912 9.7e-46 oppA E ABC transporter substrate-binding protein
LINMIGPD_00913 1.4e-94
LINMIGPD_00914 1.7e-72 L Transposase
LINMIGPD_00915 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
LINMIGPD_00916 9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LINMIGPD_00917 2.1e-106 rplD J Forms part of the polypeptide exit tunnel
LINMIGPD_00918 3.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
LINMIGPD_00919 3.6e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LINMIGPD_00920 1.1e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LINMIGPD_00921 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LINMIGPD_00922 2.7e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LINMIGPD_00923 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LINMIGPD_00924 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
LINMIGPD_00925 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LINMIGPD_00926 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LINMIGPD_00927 3.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LINMIGPD_00928 5.5e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LINMIGPD_00929 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LINMIGPD_00930 3.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LINMIGPD_00931 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LINMIGPD_00932 1.1e-54 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LINMIGPD_00933 4.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LINMIGPD_00934 2.3e-24 rpmD J Ribosomal protein L30
LINMIGPD_00935 2.6e-71 rplO J Binds to the 23S rRNA
LINMIGPD_00936 1.1e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
LINMIGPD_00937 3.5e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
LINMIGPD_00938 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LINMIGPD_00939 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
LINMIGPD_00940 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LINMIGPD_00941 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LINMIGPD_00942 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LINMIGPD_00943 1.4e-60 rplQ J Ribosomal protein L17
LINMIGPD_00944 3.7e-154 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LINMIGPD_00945 4.6e-157 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LINMIGPD_00946 2.2e-137 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LINMIGPD_00947 3e-150 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
LINMIGPD_00948 5.9e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LINMIGPD_00949 1e-66 rpsI J Belongs to the universal ribosomal protein uS9 family
LINMIGPD_00950 8.9e-133 L Phage integrase family
LINMIGPD_00951 0.0 snf 2.7.11.1 KL domain protein
LINMIGPD_00952 3.5e-109 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
LINMIGPD_00953 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LINMIGPD_00954 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LINMIGPD_00955 1.3e-136 K Transcriptional regulator
LINMIGPD_00956 2.4e-37 K Transcriptional regulator
LINMIGPD_00957 2.1e-171 ppaC 3.6.1.1 C inorganic pyrophosphatase
LINMIGPD_00958 2.7e-111 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LINMIGPD_00959 4e-57 K Helix-turn-helix domain
LINMIGPD_00960 0.0 UW LPXTG-motif cell wall anchor domain protein
LINMIGPD_00961 3.3e-45 UW LPXTG-motif cell wall anchor domain protein
LINMIGPD_00962 9.1e-10 UW LPXTG-motif cell wall anchor domain protein
LINMIGPD_00963 1.3e-248 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LINMIGPD_00964 7.5e-100 J Acetyltransferase (GNAT) domain
LINMIGPD_00965 1.4e-110 yjbF S SNARE associated Golgi protein
LINMIGPD_00966 2.7e-151 I alpha/beta hydrolase fold
LINMIGPD_00967 6.8e-156 hipB K Helix-turn-helix
LINMIGPD_00968 8.4e-70 S cog cog1373
LINMIGPD_00969 6.2e-93 F Nucleoside 2-deoxyribosyltransferase
LINMIGPD_00970 4e-259 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
LINMIGPD_00971 2.7e-268 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
LINMIGPD_00972 5.3e-136 glvR K Helix-turn-helix domain, rpiR family
LINMIGPD_00973 9.4e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
LINMIGPD_00974 4.4e-43
LINMIGPD_00975 8.7e-66 2.7.1.191 G PTS system fructose IIA component
LINMIGPD_00976 0.0 3.6.3.8 P P-type ATPase
LINMIGPD_00977 4.9e-125
LINMIGPD_00978 1.2e-241 S response to antibiotic
LINMIGPD_00979 2.6e-21
LINMIGPD_00980 1.7e-147
LINMIGPD_00981 1.5e-169
LINMIGPD_00982 2e-263 glnA 6.3.1.2 E glutamine synthetase
LINMIGPD_00983 7.8e-222 ynbB 4.4.1.1 P aluminum resistance
LINMIGPD_00984 1e-168 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LINMIGPD_00985 1.5e-65 yqhL P Rhodanese-like protein
LINMIGPD_00986 9.7e-36 yqgQ S Bacterial protein of unknown function (DUF910)
LINMIGPD_00987 3.1e-119 gluP 3.4.21.105 S Rhomboid family
LINMIGPD_00988 2.1e-97 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LINMIGPD_00989 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
LINMIGPD_00990 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
LINMIGPD_00991 0.0 S membrane
LINMIGPD_00992 5.2e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
LINMIGPD_00993 1.3e-38 S RelB antitoxin
LINMIGPD_00994 3.4e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
LINMIGPD_00995 6.7e-44 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
LINMIGPD_00996 6.7e-139 fhuC 3.6.3.34 HP abc transporter atp-binding protein
LINMIGPD_00997 9.5e-148 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LINMIGPD_00998 8.7e-159 isdE P Periplasmic binding protein
LINMIGPD_00999 6.3e-123 M Iron Transport-associated domain
LINMIGPD_01000 3e-09 isdH M Iron Transport-associated domain
LINMIGPD_01001 8.4e-89
LINMIGPD_01002 1.1e-112 S SLAP domain
LINMIGPD_01003 1.2e-51 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
LINMIGPD_01004 5.3e-41
LINMIGPD_01006 5.7e-133 S SLAP domain
LINMIGPD_01007 4.3e-40 S Protein of unknown function (DUF2922)
LINMIGPD_01008 5.5e-30
LINMIGPD_01010 3.1e-240 oppA E ABC transporter substrate-binding protein
LINMIGPD_01011 2.1e-308 oppA E ABC transporter substrate-binding protein
LINMIGPD_01012 1.9e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
LINMIGPD_01013 0.0 smc D Required for chromosome condensation and partitioning
LINMIGPD_01014 3.6e-161 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
LINMIGPD_01015 2.5e-288 pipD E Dipeptidase
LINMIGPD_01017 3.4e-23
LINMIGPD_01018 4.1e-133 cysA V ABC transporter, ATP-binding protein
LINMIGPD_01019 0.0 V FtsX-like permease family
LINMIGPD_01020 2.7e-258 yfnA E amino acid
LINMIGPD_01021 1.7e-54 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
LINMIGPD_01022 4.9e-228 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LINMIGPD_01023 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
LINMIGPD_01024 3.4e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LINMIGPD_01025 3.2e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
LINMIGPD_01026 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
LINMIGPD_01027 4.6e-213 S SLAP domain
LINMIGPD_01028 5.4e-121 ung2 3.2.2.27 L Uracil-DNA glycosylase
LINMIGPD_01029 9.8e-146 E GDSL-like Lipase/Acylhydrolase family
LINMIGPD_01030 2e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LINMIGPD_01031 3e-38 ynzC S UPF0291 protein
LINMIGPD_01032 5.5e-30 yneF S Uncharacterised protein family (UPF0154)
LINMIGPD_01033 0.0 mdlA V ABC transporter
LINMIGPD_01034 0.0 mdlB V ABC transporter
LINMIGPD_01035 0.0 pepO 3.4.24.71 O Peptidase family M13
LINMIGPD_01036 3.9e-223 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
LINMIGPD_01037 2.9e-116 plsC 2.3.1.51 I Acyltransferase
LINMIGPD_01038 3e-195 yabB 2.1.1.223 L Methyltransferase small domain
LINMIGPD_01039 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
LINMIGPD_01040 3.1e-184 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LINMIGPD_01041 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
LINMIGPD_01042 5.3e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
LINMIGPD_01043 5.4e-138 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LINMIGPD_01044 8.4e-140 cdsA 2.7.7.41 I Belongs to the CDS family
LINMIGPD_01045 5.7e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
LINMIGPD_01046 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
LINMIGPD_01047 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LINMIGPD_01048 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
LINMIGPD_01049 1.4e-196 nusA K Participates in both transcription termination and antitermination
LINMIGPD_01050 8.8e-47 ylxR K Protein of unknown function (DUF448)
LINMIGPD_01051 3.2e-47 rplGA J ribosomal protein
LINMIGPD_01052 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LINMIGPD_01053 1.1e-59 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LINMIGPD_01054 1.6e-155 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LINMIGPD_01055 3.2e-175 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
LINMIGPD_01056 4.9e-193 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
LINMIGPD_01057 8e-68 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LINMIGPD_01058 0.0 dnaK O Heat shock 70 kDa protein
LINMIGPD_01059 2.2e-202 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
LINMIGPD_01060 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
LINMIGPD_01061 1.5e-102 srtA 3.4.22.70 M sortase family
LINMIGPD_01062 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
LINMIGPD_01063 1.2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LINMIGPD_01064 7.5e-231 pbuG S permease
LINMIGPD_01065 2.5e-119 K helix_turn_helix, mercury resistance
LINMIGPD_01066 3.3e-37
LINMIGPD_01067 5.4e-113
LINMIGPD_01068 1.7e-139
LINMIGPD_01069 6.9e-100 V ATPases associated with a variety of cellular activities
LINMIGPD_01070 3.7e-146 ykuT M mechanosensitive ion channel
LINMIGPD_01071 9.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
LINMIGPD_01072 1.3e-36
LINMIGPD_01073 7e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
LINMIGPD_01074 3.2e-181 ccpA K catabolite control protein A
LINMIGPD_01075 2.3e-267 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
LINMIGPD_01076 4.3e-55
LINMIGPD_01077 1.3e-273 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
LINMIGPD_01078 2.1e-92 yutD S Protein of unknown function (DUF1027)
LINMIGPD_01079 3.4e-143 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
LINMIGPD_01080 3.7e-100 S Protein of unknown function (DUF1461)
LINMIGPD_01081 6.8e-116 dedA S SNARE-like domain protein
LINMIGPD_01082 7.5e-183 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
LINMIGPD_01083 1.8e-200 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
LINMIGPD_01084 2.2e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
LINMIGPD_01085 2.6e-214 yubA S AI-2E family transporter
LINMIGPD_01086 4.2e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
LINMIGPD_01087 1.7e-69 WQ51_03320 S Protein of unknown function (DUF1149)
LINMIGPD_01088 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
LINMIGPD_01089 9e-223 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
LINMIGPD_01090 1.9e-236 S Peptidase M16
LINMIGPD_01091 2.3e-133 IQ Enoyl-(Acyl carrier protein) reductase
LINMIGPD_01092 5.2e-97 ymfM S Helix-turn-helix domain
LINMIGPD_01093 1.1e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LINMIGPD_01094 3.6e-194 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LINMIGPD_01095 7.4e-220 rny S Endoribonuclease that initiates mRNA decay
LINMIGPD_01096 1.3e-210 tagO 2.7.8.33, 2.7.8.35 M transferase
LINMIGPD_01097 5.1e-119 yvyE 3.4.13.9 S YigZ family
LINMIGPD_01098 4.7e-246 comFA L Helicase C-terminal domain protein
LINMIGPD_01099 9.4e-132 comFC S Competence protein
LINMIGPD_01100 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LINMIGPD_01101 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
LINMIGPD_01102 4.6e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
LINMIGPD_01103 5.1e-17
LINMIGPD_01104 5.8e-180 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
LINMIGPD_01105 9.2e-158 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LINMIGPD_01106 1.1e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
LINMIGPD_01107 3.9e-181 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
LINMIGPD_01108 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
LINMIGPD_01109 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
LINMIGPD_01110 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
LINMIGPD_01111 4.1e-90 S Short repeat of unknown function (DUF308)
LINMIGPD_01112 6.2e-165 rapZ S Displays ATPase and GTPase activities
LINMIGPD_01113 4e-195 ybhK S Required for morphogenesis under gluconeogenic growth conditions
LINMIGPD_01114 2.1e-171 whiA K May be required for sporulation
LINMIGPD_01115 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LINMIGPD_01116 0.0 S SH3-like domain
LINMIGPD_01117 4.9e-111 ybbL S ABC transporter, ATP-binding protein
LINMIGPD_01118 2.5e-130 ybbM S Uncharacterised protein family (UPF0014)
LINMIGPD_01119 2.3e-164 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
LINMIGPD_01120 1.6e-294 L Nuclease-related domain
LINMIGPD_01121 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
LINMIGPD_01122 8.3e-106 S Repeat protein
LINMIGPD_01123 1.5e-126 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
LINMIGPD_01124 4.6e-221 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
LINMIGPD_01125 2.2e-57 XK27_04120 S Putative amino acid metabolism
LINMIGPD_01126 3.2e-217 iscS 2.8.1.7 E Aminotransferase class V
LINMIGPD_01127 1.2e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LINMIGPD_01128 6.7e-37
LINMIGPD_01129 2.8e-102 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
LINMIGPD_01130 3.6e-31 cspA K 'Cold-shock' DNA-binding domain
LINMIGPD_01131 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LINMIGPD_01132 2.8e-74 gpsB D DivIVA domain protein
LINMIGPD_01133 5.7e-149 ylmH S S4 domain protein
LINMIGPD_01134 1.7e-45 yggT S YGGT family
LINMIGPD_01135 7.3e-74 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
LINMIGPD_01136 1.7e-206 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LINMIGPD_01137 1.3e-246 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
LINMIGPD_01138 4.5e-152 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
LINMIGPD_01139 3.7e-207 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LINMIGPD_01140 5e-262 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LINMIGPD_01141 1.5e-175 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LINMIGPD_01142 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
LINMIGPD_01143 1.8e-54 ftsL D Cell division protein FtsL
LINMIGPD_01144 7.2e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
LINMIGPD_01145 6.3e-78 mraZ K Belongs to the MraZ family
LINMIGPD_01146 6.4e-54 S Protein of unknown function (DUF3397)
LINMIGPD_01148 2.7e-94 mreD
LINMIGPD_01149 2e-147 mreC M Involved in formation and maintenance of cell shape
LINMIGPD_01150 2.4e-176 mreB D cell shape determining protein MreB
LINMIGPD_01151 2.3e-108 radC L DNA repair protein
LINMIGPD_01152 5.7e-126 S Haloacid dehalogenase-like hydrolase
LINMIGPD_01153 1.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
LINMIGPD_01154 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
LINMIGPD_01155 2.5e-52
LINMIGPD_01156 1.1e-132 S AAA domain, putative AbiEii toxin, Type IV TA system
LINMIGPD_01157 0.0 3.6.3.8 P P-type ATPase
LINMIGPD_01159 6.5e-44
LINMIGPD_01160 1.5e-94 S Protein of unknown function (DUF3990)
LINMIGPD_01161 5.2e-170 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
LINMIGPD_01162 2.1e-65 2.4.1.83 GT2 S GtrA-like protein
LINMIGPD_01163 5.5e-44 3.6.4.12 S PD-(D/E)XK nuclease family transposase
LINMIGPD_01164 3.2e-119 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
LINMIGPD_01165 1.7e-184 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
LINMIGPD_01166 2e-225 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LINMIGPD_01167 7.4e-214 iscS2 2.8.1.7 E Aminotransferase class V
LINMIGPD_01168 2.1e-294 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
LINMIGPD_01169 1.4e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LINMIGPD_01170 1.3e-84 yueI S Protein of unknown function (DUF1694)
LINMIGPD_01171 2.2e-238 rarA L recombination factor protein RarA
LINMIGPD_01172 8.4e-39
LINMIGPD_01173 1.8e-78 usp6 T universal stress protein
LINMIGPD_01174 4.7e-216 rodA D Belongs to the SEDS family
LINMIGPD_01175 3.3e-33 S Protein of unknown function (DUF2969)
LINMIGPD_01176 1e-50 yidD S Could be involved in insertion of integral membrane proteins into the membrane
LINMIGPD_01177 1.2e-177 mbl D Cell shape determining protein MreB Mrl
LINMIGPD_01178 2e-30 ywzB S Protein of unknown function (DUF1146)
LINMIGPD_01179 9e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
LINMIGPD_01180 3.3e-240 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LINMIGPD_01181 2e-172 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LINMIGPD_01182 2.8e-282 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LINMIGPD_01183 2.8e-91 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LINMIGPD_01184 3.4e-46 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LINMIGPD_01185 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LINMIGPD_01186 3.8e-128 atpB C it plays a direct role in the translocation of protons across the membrane
LINMIGPD_01187 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LINMIGPD_01188 3.7e-190 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
LINMIGPD_01189 7.3e-155 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
LINMIGPD_01190 3.1e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LINMIGPD_01191 1.3e-113 tdk 2.7.1.21 F thymidine kinase
LINMIGPD_01192 4.9e-262 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
LINMIGPD_01195 3.9e-195 ampC V Beta-lactamase
LINMIGPD_01196 3.8e-217 EGP Major facilitator Superfamily
LINMIGPD_01197 3.2e-253 pgi 5.3.1.9 G Belongs to the GPI family
LINMIGPD_01198 3.8e-105 vanZ V VanZ like family
LINMIGPD_01199 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
LINMIGPD_01200 7.2e-267 yclK 2.7.13.3, 4.6.1.1 T Histidine kinase
LINMIGPD_01201 4.4e-129 K Transcriptional regulatory protein, C terminal
LINMIGPD_01202 7.7e-67 S SdpI/YhfL protein family
LINMIGPD_01203 1.6e-190 manA 5.3.1.8 G mannose-6-phosphate isomerase
LINMIGPD_01204 9.9e-227 patB 4.4.1.8 E Aminotransferase, class I
LINMIGPD_01205 2.5e-89 M Protein of unknown function (DUF3737)
LINMIGPD_01206 7.6e-18 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
LINMIGPD_01207 1e-12
LINMIGPD_01209 5e-15 S Domain of Unknown Function with PDB structure (DUF3850)
LINMIGPD_01210 1.4e-118 D Alpha beta
LINMIGPD_01211 4.6e-263 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LINMIGPD_01212 1.5e-144 recX 2.4.1.337 GT4 S Regulatory protein RecX
LINMIGPD_01213 1.6e-85
LINMIGPD_01214 2.7e-74
LINMIGPD_01215 1.4e-140 hlyX S Transporter associated domain
LINMIGPD_01216 9.4e-305 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
LINMIGPD_01217 2.3e-44 XK27_09445 S Domain of unknown function (DUF1827)
LINMIGPD_01218 0.0 clpE O Belongs to the ClpA ClpB family
LINMIGPD_01219 1.3e-34 L An automated process has identified a potential problem with this gene model
LINMIGPD_01220 8e-125 S Alpha/beta hydrolase family
LINMIGPD_01221 4.9e-156 epsV 2.7.8.12 S glycosyl transferase family 2
LINMIGPD_01222 4.4e-140 ypuA S Protein of unknown function (DUF1002)
LINMIGPD_01223 3.3e-146 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LINMIGPD_01224 1.6e-182 S Alpha/beta hydrolase of unknown function (DUF915)
LINMIGPD_01225 2.5e-283 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LINMIGPD_01226 9.3e-86
LINMIGPD_01227 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
LINMIGPD_01228 4.2e-150 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LINMIGPD_01229 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
LINMIGPD_01230 7.2e-56 yheA S Belongs to the UPF0342 family
LINMIGPD_01231 1e-226 yhaO L Ser Thr phosphatase family protein
LINMIGPD_01232 0.0 L AAA domain
LINMIGPD_01233 1.9e-186 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
LINMIGPD_01234 2.9e-23
LINMIGPD_01235 2.4e-51 S Domain of unknown function DUF1829
LINMIGPD_01236 1.1e-265
LINMIGPD_01237 1.9e-72 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
LINMIGPD_01238 4.3e-153 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
LINMIGPD_01239 3.9e-25
LINMIGPD_01240 8.3e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
LINMIGPD_01241 5.7e-135 ecsA V ABC transporter, ATP-binding protein
LINMIGPD_01242 6.5e-221 ecsB U ABC transporter
LINMIGPD_01243 3.3e-126 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
LINMIGPD_01245 2.8e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
LINMIGPD_01246 1.4e-122 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LINMIGPD_01247 9.7e-247 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
LINMIGPD_01248 6.9e-218 mepA V MATE efflux family protein
LINMIGPD_01249 1.8e-176 S SLAP domain
LINMIGPD_01250 4.4e-283 M Peptidase family M1 domain
LINMIGPD_01251 4.5e-188 S Bacteriocin helveticin-J
LINMIGPD_01252 8e-51 L RelB antitoxin
LINMIGPD_01253 1.3e-104 qmcA O prohibitin homologues
LINMIGPD_01254 3.5e-25 qmcA O prohibitin homologues
LINMIGPD_01255 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LINMIGPD_01256 4.2e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
LINMIGPD_01257 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LINMIGPD_01258 3.5e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LINMIGPD_01259 1.5e-250 dnaB L Replication initiation and membrane attachment
LINMIGPD_01260 2.1e-168 dnaI L Primosomal protein DnaI
LINMIGPD_01261 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LINMIGPD_01262 5.3e-26
LINMIGPD_01263 8.5e-41 ptsH G phosphocarrier protein HPR
LINMIGPD_01264 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LINMIGPD_01265 3.9e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
LINMIGPD_01266 8.5e-139 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
LINMIGPD_01267 3.3e-132 coiA 3.6.4.12 S Competence protein
LINMIGPD_01268 4e-13 coiA 3.6.4.12 S Competence protein
LINMIGPD_01269 4.6e-114 yjbH Q Thioredoxin
LINMIGPD_01270 6.8e-110 yjbK S CYTH
LINMIGPD_01271 1.2e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
LINMIGPD_01272 3.8e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LINMIGPD_01273 6.4e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LINMIGPD_01274 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
LINMIGPD_01275 4.2e-92 S SNARE associated Golgi protein
LINMIGPD_01276 3.7e-102 L Integrase
LINMIGPD_01277 3.6e-69 T Toxin-antitoxin system, toxin component, MazF family
LINMIGPD_01278 1.3e-30
LINMIGPD_01294 5.3e-76 sip L Belongs to the 'phage' integrase family
LINMIGPD_01296 8.7e-12
LINMIGPD_01298 9.8e-18 K Transcriptional
LINMIGPD_01300 2e-107 K BRO family, N-terminal domain
LINMIGPD_01302 2.9e-08
LINMIGPD_01306 2.9e-63 S ERF superfamily
LINMIGPD_01307 2.8e-50 S calcium ion binding
LINMIGPD_01308 3.7e-84 dnaC L IstB-like ATP binding protein
LINMIGPD_01311 2.9e-07
LINMIGPD_01312 2.9e-42 S ASCH domain
LINMIGPD_01313 2.2e-101 1.8.4.10, 1.8.4.8, 2.7.7.4 EH sulfate reduction
LINMIGPD_01315 2.2e-30
LINMIGPD_01316 5.4e-111 K Belongs to the N(4) N(6)-methyltransferase family
LINMIGPD_01319 3.7e-85 L transposase activity
LINMIGPD_01320 3.7e-211 S Terminase RNAseH like domain
LINMIGPD_01321 4.9e-216 S Phage portal protein, SPP1 Gp6-like
LINMIGPD_01322 5.7e-166 S Phage minor capsid protein 2
LINMIGPD_01324 1e-36 S Phage minor structural protein GP20
LINMIGPD_01325 4.6e-154 gpG
LINMIGPD_01326 4.2e-44
LINMIGPD_01327 1.6e-39 S Minor capsid protein
LINMIGPD_01328 1.2e-30 S Minor capsid protein
LINMIGPD_01329 3e-51 S Minor capsid protein from bacteriophage
LINMIGPD_01330 4.6e-83 N domain, Protein
LINMIGPD_01331 8.7e-35
LINMIGPD_01332 5.5e-86 S Bacteriophage Gp15 protein
LINMIGPD_01333 0.0 xkdO D NLP P60 protein
LINMIGPD_01334 8.7e-110 S phage tail
LINMIGPD_01335 0.0 S Phage minor structural protein
LINMIGPD_01337 3.8e-06 S Domain of unknown function (DUF2479)
LINMIGPD_01344 1.8e-38 S Bacteriophage holin of superfamily 6 (Holin_LLH)
LINMIGPD_01345 2.3e-103 M hydrolase, family 25
LINMIGPD_01361 7.9e-224 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
LINMIGPD_01362 7.6e-202 cpoA GT4 M Glycosyltransferase, group 1 family protein
LINMIGPD_01363 1.4e-176 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
LINMIGPD_01364 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
LINMIGPD_01365 1.7e-29 secG U Preprotein translocase
LINMIGPD_01366 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
LINMIGPD_01367 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
LINMIGPD_01369 1.9e-117 cps1D M Domain of unknown function (DUF4422)
LINMIGPD_01370 6.7e-110 rfbP M Bacterial sugar transferase
LINMIGPD_01371 1.4e-144 ywqE 3.1.3.48 GM PHP domain protein
LINMIGPD_01372 1.3e-121 ywqD 2.7.10.1 D Capsular exopolysaccharide family
LINMIGPD_01373 6.5e-146 epsB M biosynthesis protein
LINMIGPD_01374 1.9e-176 brpA K Cell envelope-like function transcriptional attenuator common domain protein
LINMIGPD_01376 3.8e-216 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LINMIGPD_01377 3.5e-175 S Cysteine-rich secretory protein family
LINMIGPD_01378 1.6e-41
LINMIGPD_01379 2.6e-118 M NlpC/P60 family
LINMIGPD_01380 1.4e-136 M NlpC P60 family protein
LINMIGPD_01381 5e-88 M NlpC/P60 family
LINMIGPD_01382 2.2e-88 gmk2 2.7.4.8 F Guanylate kinase homologues.
LINMIGPD_01383 3.9e-42
LINMIGPD_01384 2.9e-279 S O-antigen ligase like membrane protein
LINMIGPD_01385 3.3e-112
LINMIGPD_01386 4.7e-221 tnpB L Putative transposase DNA-binding domain
LINMIGPD_01387 5.5e-77 nrdI F NrdI Flavodoxin like
LINMIGPD_01388 4.9e-176 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LINMIGPD_01389 2.5e-68
LINMIGPD_01390 2.7e-111 yvpB S Peptidase_C39 like family
LINMIGPD_01391 1.1e-83 S Threonine/Serine exporter, ThrE
LINMIGPD_01392 2.4e-136 thrE S Putative threonine/serine exporter
LINMIGPD_01393 8.9e-292 S ABC transporter
LINMIGPD_01394 8.3e-58
LINMIGPD_01395 5e-72 rimL J Acetyltransferase (GNAT) domain
LINMIGPD_01396 1.4e-34
LINMIGPD_01397 1.2e-30
LINMIGPD_01398 1.8e-111 S Protein of unknown function (DUF554)
LINMIGPD_01399 8.7e-197 brpA K Cell envelope-like function transcriptional attenuator common domain protein
LINMIGPD_01400 0.0 pepF E oligoendopeptidase F
LINMIGPD_01401 2.9e-31
LINMIGPD_01402 1.3e-69 doc S Prophage maintenance system killer protein
LINMIGPD_01405 4.6e-27 S Enterocin A Immunity
LINMIGPD_01406 1.7e-22 blpT
LINMIGPD_01407 7.7e-65 L An automated process has identified a potential problem with this gene model
LINMIGPD_01408 3.1e-48 S Domain of unknown function (DUF4811)
LINMIGPD_01409 1.4e-262 lmrB EGP Major facilitator Superfamily
LINMIGPD_01410 4.2e-77 K MerR HTH family regulatory protein
LINMIGPD_01411 3.1e-139 S Cysteine-rich secretory protein family
LINMIGPD_01412 4e-245 ycaM E amino acid
LINMIGPD_01413 2.8e-290
LINMIGPD_01415 3.3e-189 cggR K Putative sugar-binding domain
LINMIGPD_01416 6.5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
LINMIGPD_01417 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
LINMIGPD_01418 1.7e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
LINMIGPD_01419 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LINMIGPD_01420 3.5e-32 ykzG S Belongs to the UPF0356 family
LINMIGPD_01421 8.9e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LINMIGPD_01422 0.0 typA T GTP-binding protein TypA
LINMIGPD_01423 5.9e-211 ftsW D Belongs to the SEDS family
LINMIGPD_01424 5.1e-54 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
LINMIGPD_01425 4.5e-97 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
LINMIGPD_01426 3.6e-82 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LINMIGPD_01427 2.4e-187 ylbL T Belongs to the peptidase S16 family
LINMIGPD_01428 3.1e-79 comEA L Competence protein ComEA
LINMIGPD_01429 0.0 comEC S Competence protein ComEC
LINMIGPD_01430 2.6e-175 holA 2.7.7.7 L DNA polymerase III delta subunit
LINMIGPD_01431 2.6e-34 rpsT J Binds directly to 16S ribosomal RNA
LINMIGPD_01432 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LINMIGPD_01433 3e-310 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LINMIGPD_01434 1.3e-148
LINMIGPD_01435 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LINMIGPD_01436 5.8e-215 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
LINMIGPD_01437 2e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LINMIGPD_01438 1.4e-104 engB D Necessary for normal cell division and for the maintenance of normal septation
LINMIGPD_01439 7.8e-39 yjeM E Amino Acid
LINMIGPD_01440 3.4e-175 yjeM E Amino Acid
LINMIGPD_01441 2.3e-192 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
LINMIGPD_01442 1.3e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
LINMIGPD_01443 1.3e-246 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
LINMIGPD_01444 2.8e-75 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
LINMIGPD_01445 2e-219 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
LINMIGPD_01446 9.8e-177 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LINMIGPD_01447 7e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
LINMIGPD_01448 2.7e-216 aspC 2.6.1.1 E Aminotransferase
LINMIGPD_01449 2.6e-197 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LINMIGPD_01450 2.1e-194 pbpX1 V Beta-lactamase
LINMIGPD_01451 1.2e-299 I Protein of unknown function (DUF2974)
LINMIGPD_01452 0.0 L Plasmid pRiA4b ORF-3-like protein
LINMIGPD_01453 1.4e-83 K FR47-like protein
LINMIGPD_01454 1.1e-297 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
LINMIGPD_01455 2e-194 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LINMIGPD_01456 2.2e-165 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
LINMIGPD_01457 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LINMIGPD_01458 2.6e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
LINMIGPD_01459 1.8e-62 yabR J S1 RNA binding domain
LINMIGPD_01460 6.8e-60 divIC D Septum formation initiator
LINMIGPD_01461 1.7e-193 S TerB-C domain
LINMIGPD_01462 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
LINMIGPD_01463 3.9e-298 V ABC transporter transmembrane region
LINMIGPD_01464 2.3e-156 K Helix-turn-helix XRE-family like proteins
LINMIGPD_01465 3.7e-59 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
LINMIGPD_01466 2.1e-32
LINMIGPD_01467 2.3e-78 4.1.1.44 S Carboxymuconolactone decarboxylase family
LINMIGPD_01468 3.2e-28 4.1.1.44 S Carboxymuconolactone decarboxylase family
LINMIGPD_01469 1e-218 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
LINMIGPD_01470 2.1e-79 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LINMIGPD_01471 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
LINMIGPD_01472 0.0 mtlR K Mga helix-turn-helix domain
LINMIGPD_01473 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
LINMIGPD_01474 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
LINMIGPD_01475 6.8e-243 cycA E Amino acid permease
LINMIGPD_01476 1.3e-85 maa S transferase hexapeptide repeat
LINMIGPD_01477 3.3e-158 K Transcriptional regulator
LINMIGPD_01478 1.1e-62 manO S Domain of unknown function (DUF956)
LINMIGPD_01479 1e-173 manN G system, mannose fructose sorbose family IID component
LINMIGPD_01480 1.7e-129 manY G PTS system
LINMIGPD_01481 8.7e-187 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
LINMIGPD_01482 2.2e-85 S PFAM Archaeal ATPase
LINMIGPD_01483 5.7e-84 S PFAM Archaeal ATPase
LINMIGPD_01484 7.7e-26
LINMIGPD_01485 1.2e-70 menA 2.5.1.74 H UbiA prenyltransferase family
LINMIGPD_01486 7.7e-30 ropB K Helix-turn-helix domain
LINMIGPD_01487 1.1e-110 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LINMIGPD_01488 6.6e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
LINMIGPD_01489 1.1e-71 yslB S Protein of unknown function (DUF2507)
LINMIGPD_01490 9.7e-59 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
LINMIGPD_01491 3.5e-54 trxA O Belongs to the thioredoxin family
LINMIGPD_01492 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
LINMIGPD_01493 1.1e-50 yrzB S Belongs to the UPF0473 family
LINMIGPD_01494 6.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LINMIGPD_01495 2e-42 yrzL S Belongs to the UPF0297 family
LINMIGPD_01496 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LINMIGPD_01497 2e-226 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
LINMIGPD_01498 8.8e-181 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
LINMIGPD_01499 6.2e-210 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LINMIGPD_01500 9.6e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LINMIGPD_01501 9.6e-41 yajC U Preprotein translocase
LINMIGPD_01502 1.5e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
LINMIGPD_01503 1.7e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
LINMIGPD_01504 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
LINMIGPD_01505 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LINMIGPD_01506 5.9e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
LINMIGPD_01507 1.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
LINMIGPD_01508 3.5e-75
LINMIGPD_01509 2.3e-181 M CHAP domain
LINMIGPD_01510 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
LINMIGPD_01511 3.7e-295 scrB 3.2.1.26 GH32 G invertase
LINMIGPD_01512 1.1e-183 scrR K helix_turn _helix lactose operon repressor
LINMIGPD_01513 5.3e-80
LINMIGPD_01514 2e-295 S SLAP domain
LINMIGPD_01515 4.8e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LINMIGPD_01516 1.6e-171 2.7.1.2 GK ROK family
LINMIGPD_01517 6.6e-44
LINMIGPD_01518 9.4e-269 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
LINMIGPD_01519 3.7e-263 V ABC-type multidrug transport system, ATPase and permease components
LINMIGPD_01520 1.2e-250 yifK E Amino acid permease
LINMIGPD_01521 1.3e-179 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LINMIGPD_01522 1.5e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LINMIGPD_01523 0.0 aha1 P E1-E2 ATPase
LINMIGPD_01524 2.4e-175 F DNA/RNA non-specific endonuclease
LINMIGPD_01525 5.9e-160 metQ2 P Belongs to the nlpA lipoprotein family
LINMIGPD_01526 2.6e-189 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LINMIGPD_01527 3.4e-73 metI P ABC transporter permease
LINMIGPD_01528 9e-267 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
LINMIGPD_01529 1.9e-261 frdC 1.3.5.4 C FAD binding domain
LINMIGPD_01530 3.1e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
LINMIGPD_01531 3.5e-252 pepC 3.4.22.40 E Peptidase C1-like family
LINMIGPD_01532 1.3e-133 hxlA 6.2.1.3 H Aldolase/RraA
LINMIGPD_01533 5.7e-272 P Sodium:sulfate symporter transmembrane region
LINMIGPD_01534 2.8e-127 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
LINMIGPD_01535 4.5e-192 I transferase activity, transferring acyl groups other than amino-acyl groups
LINMIGPD_01536 5.6e-179 S PFAM Archaeal ATPase
LINMIGPD_01537 2.4e-73 S cog cog1373
LINMIGPD_01538 3.1e-107 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
LINMIGPD_01539 1.7e-201 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LINMIGPD_01540 2.2e-120 lsa S ABC transporter
LINMIGPD_01541 8.8e-58 S Peptidase propeptide and YPEB domain
LINMIGPD_01542 1.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LINMIGPD_01543 2.5e-169 coaA 2.7.1.33 F Pantothenic acid kinase
LINMIGPD_01544 7.1e-98 E GDSL-like Lipase/Acylhydrolase
LINMIGPD_01545 7.5e-74 yjcF S Acetyltransferase (GNAT) domain
LINMIGPD_01546 1.6e-143 aatB ET ABC transporter substrate-binding protein
LINMIGPD_01547 1e-105 glnQ 3.6.3.21 E ABC transporter
LINMIGPD_01548 1.5e-107 glnP P ABC transporter permease
LINMIGPD_01549 0.0 helD 3.6.4.12 L DNA helicase
LINMIGPD_01550 5.6e-118 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
LINMIGPD_01551 1.4e-126 pgm3 G Phosphoglycerate mutase family
LINMIGPD_01552 1e-48 S Metal binding domain of Ada
LINMIGPD_01553 0.0 mgtA 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
LINMIGPD_01554 9e-137 lysR5 K LysR substrate binding domain
LINMIGPD_01555 8.8e-234 arcA 3.5.3.6 E Arginine
LINMIGPD_01556 4.3e-66 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LINMIGPD_01557 2e-105 argF 2.1.3.3, 2.7.2.2 E Belongs to the carbamate kinase family
LINMIGPD_01558 9.2e-95 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
LINMIGPD_01559 2.3e-215 S Sterol carrier protein domain
LINMIGPD_01560 1e-20
LINMIGPD_01561 4.9e-108 K LysR substrate binding domain
LINMIGPD_01562 9e-98
LINMIGPD_01563 3e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
LINMIGPD_01565 7.8e-78 2.5.1.74 H UbiA prenyltransferase family
LINMIGPD_01566 1e-95
LINMIGPD_01567 1.2e-210 S Bacterial protein of unknown function (DUF871)
LINMIGPD_01569 2.3e-43 ybhL S Belongs to the BI1 family
LINMIGPD_01570 1.3e-71 K Helix-turn-helix domain, rpiR family
LINMIGPD_01571 4.1e-21 K Helix-turn-helix domain, rpiR family
LINMIGPD_01572 4.9e-82 rarA L MgsA AAA+ ATPase C terminal
LINMIGPD_01573 4.3e-226 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LINMIGPD_01575 1.8e-104 3.2.2.20 K acetyltransferase
LINMIGPD_01576 2.3e-93 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
LINMIGPD_01577 1.4e-52 EGP Sugar (and other) transporter
LINMIGPD_01578 1e-104
LINMIGPD_01579 8.2e-114 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
LINMIGPD_01580 0.0 copA 3.6.3.54 P P-type ATPase
LINMIGPD_01581 3.1e-49 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
LINMIGPD_01582 4.9e-58 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
LINMIGPD_01583 9.2e-14 ropB K Helix-turn-helix domain
LINMIGPD_01584 3.3e-237 L COG2963 Transposase and inactivated derivatives
LINMIGPD_01585 4.7e-46 pspC KT PspC domain
LINMIGPD_01587 1.3e-240 dacA 3.4.16.4 M Belongs to the peptidase S11 family
LINMIGPD_01588 2.8e-154 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LINMIGPD_01589 6.7e-98 M ErfK YbiS YcfS YnhG
LINMIGPD_01590 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
LINMIGPD_01591 4.6e-171 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
LINMIGPD_01592 8.5e-133 cobB K SIR2 family
LINMIGPD_01593 9.2e-92 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
LINMIGPD_01594 1.3e-124 terC P Integral membrane protein TerC family
LINMIGPD_01595 5.8e-64 yeaO S Protein of unknown function, DUF488
LINMIGPD_01596 8.9e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
LINMIGPD_01597 1.3e-290 glnP P ABC transporter permease
LINMIGPD_01598 3.4e-135 glnQ E ABC transporter, ATP-binding protein
LINMIGPD_01599 7.3e-148 S Protein of unknown function (DUF805)
LINMIGPD_01600 6.4e-159 L HNH nucleases
LINMIGPD_01601 1e-119 yfbR S HD containing hydrolase-like enzyme
LINMIGPD_01602 4e-177 G Glycosyl hydrolases family 8
LINMIGPD_01603 4.5e-189 ydaM M Glycosyl transferase
LINMIGPD_01604 1.1e-07 S Uncharacterised protein family (UPF0236)
LINMIGPD_01605 1.2e-17
LINMIGPD_01606 1.9e-309 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
LINMIGPD_01607 2e-70 S Iron-sulphur cluster biosynthesis
LINMIGPD_01609 6.7e-168 ybiR P Citrate transporter
LINMIGPD_01610 5.1e-96 lemA S LemA family
LINMIGPD_01611 8.3e-157 htpX O Belongs to the peptidase M48B family
LINMIGPD_01612 7.9e-174 K helix_turn_helix, arabinose operon control protein
LINMIGPD_01613 4.8e-249 cbiO1 S ABC transporter, ATP-binding protein
LINMIGPD_01614 2.8e-77 P Cobalt transport protein
LINMIGPD_01615 1.8e-175 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
LINMIGPD_01616 6.5e-91 G Peptidase_C39 like family
LINMIGPD_01617 2.8e-162 M NlpC/P60 family
LINMIGPD_01618 8.4e-25 G Peptidase_C39 like family
LINMIGPD_01619 2.9e-277 V ABC transporter transmembrane region
LINMIGPD_01620 2.1e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
LINMIGPD_01621 3.1e-130 T Transcriptional regulatory protein, C terminal
LINMIGPD_01622 5.2e-187 T GHKL domain
LINMIGPD_01623 3.4e-76 S Peptidase propeptide and YPEB domain
LINMIGPD_01624 2.5e-72 S Peptidase propeptide and YPEB domain
LINMIGPD_01625 4.7e-83 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
LINMIGPD_01626 3.8e-65 yybA 2.3.1.57 K Transcriptional regulator
LINMIGPD_01627 7e-68 V ABC transporter transmembrane region
LINMIGPD_01628 9e-161 V ABC transporter transmembrane region
LINMIGPD_01629 2.3e-309 oppA3 E ABC transporter, substratebinding protein
LINMIGPD_01630 2.4e-60 ypaA S Protein of unknown function (DUF1304)
LINMIGPD_01631 2.1e-28 S Peptidase propeptide and YPEB domain
LINMIGPD_01632 1.5e-239 L transposase, IS605 OrfB family
LINMIGPD_01633 1.3e-116 S Peptidase family M23
LINMIGPD_01634 1.8e-104 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LINMIGPD_01636 4.6e-160 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
LINMIGPD_01637 9.4e-118
LINMIGPD_01638 2.8e-157 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
LINMIGPD_01639 6.6e-221 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
LINMIGPD_01640 2.6e-280 thrC 4.2.3.1 E Threonine synthase
LINMIGPD_01641 8.8e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
LINMIGPD_01642 9.6e-103 pgm3 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
LINMIGPD_01644 1.2e-134 EGP Major facilitator Superfamily
LINMIGPD_01645 4e-150 3.1.3.102, 3.1.3.104 S haloacid dehalogenase-like hydrolase
LINMIGPD_01646 0.0 tetP J elongation factor G
LINMIGPD_01647 3.5e-160 yvgN C Aldo keto reductase
LINMIGPD_01648 2e-155 P CorA-like Mg2+ transporter protein
LINMIGPD_01649 5.6e-132 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
LINMIGPD_01650 4.9e-174 ABC-SBP S ABC transporter
LINMIGPD_01651 5.6e-121 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
LINMIGPD_01652 2.4e-136 XK27_08845 S ABC transporter, ATP-binding protein
LINMIGPD_01653 5.2e-248 G Major Facilitator
LINMIGPD_01654 4.1e-18
LINMIGPD_01655 2.6e-103 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
LINMIGPD_01656 1.4e-176 K AI-2E family transporter
LINMIGPD_01657 8.6e-97 oppA E ABC transporter substrate-binding protein
LINMIGPD_01658 1.2e-232 oppA E ABC transporter substrate-binding protein
LINMIGPD_01659 2e-116 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
LINMIGPD_01660 0.0 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
LINMIGPD_01661 9.6e-28 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
LINMIGPD_01662 2.6e-146 S Putative ABC-transporter type IV
LINMIGPD_01663 1.7e-07 S LPXTG cell wall anchor motif
LINMIGPD_01664 1.6e-96 ybaT E Amino acid permease
LINMIGPD_01666 7.6e-26 WQ51_00220 K Helix-turn-helix XRE-family like proteins
LINMIGPD_01667 1.4e-22 S CAAX protease self-immunity
LINMIGPD_01668 1.5e-25 S CAAX protease self-immunity
LINMIGPD_01669 2.9e-24 K Helix-turn-helix domain
LINMIGPD_01670 1.3e-36 K Helix-turn-helix domain
LINMIGPD_01671 1.1e-110 K Helix-turn-helix XRE-family like proteins
LINMIGPD_01672 2e-42 fryA 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LINMIGPD_01673 5.3e-37 mngA 2.7.1.195, 2.7.1.202 G Psort location Cytoplasmic, score 9.98
LINMIGPD_01674 1.4e-150 mngA 2.7.1.195, 2.7.1.202 U system, fructose-specific IIC component
LINMIGPD_01675 5.5e-281 ybgG 3.2.1.170 GH38 G Glycosyl hydrolases family 38 N-terminal domain
LINMIGPD_01676 1.4e-137 licR 2.7.1.200, 2.7.1.202 G Mga helix-turn-helix domain
LINMIGPD_01677 0.0 mngB 3.2.1.170, 3.2.1.24 GH38 G Glycosyl hydrolases family 38 N-terminal domain
LINMIGPD_01678 5.4e-13
LINMIGPD_01679 1.6e-07
LINMIGPD_01680 1.4e-22 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
LINMIGPD_01681 3.6e-90 ntd 2.4.2.6 F Nucleoside
LINMIGPD_01682 3.9e-87 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LINMIGPD_01683 3.4e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
LINMIGPD_01684 5.2e-84 uspA T universal stress protein
LINMIGPD_01685 2.3e-149 phnD P Phosphonate ABC transporter
LINMIGPD_01686 4.1e-136 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
LINMIGPD_01687 1.2e-111 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
LINMIGPD_01688 2.2e-148 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
LINMIGPD_01689 3.3e-106 tag 3.2.2.20 L glycosylase
LINMIGPD_01690 3.9e-84
LINMIGPD_01691 1.7e-273 S Calcineurin-like phosphoesterase
LINMIGPD_01692 0.0 asnB 6.3.5.4 E Asparagine synthase
LINMIGPD_01693 5.6e-255 yxbA 6.3.1.12 S ATP-grasp enzyme
LINMIGPD_01694 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
LINMIGPD_01695 8.7e-141 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LINMIGPD_01696 1.3e-102 S Iron-sulfur cluster assembly protein
LINMIGPD_01697 1.5e-230 XK27_04775 S PAS domain
LINMIGPD_01698 1.4e-210 yttB EGP Major facilitator Superfamily
LINMIGPD_01699 0.0 pepO 3.4.24.71 O Peptidase family M13
LINMIGPD_01700 0.0 kup P Transport of potassium into the cell
LINMIGPD_01701 7.3e-74
LINMIGPD_01702 2.1e-45 S PFAM Archaeal ATPase
LINMIGPD_01704 3.7e-58 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
LINMIGPD_01705 5.9e-45
LINMIGPD_01706 6.1e-42 ruvB 3.6.4.12 L four-way junction helicase activity
LINMIGPD_01707 9.5e-38 L Protein of unknown function (DUF3991)
LINMIGPD_01708 4.2e-112 S Fic/DOC family
LINMIGPD_01709 3.9e-48 E Pfam:DUF955
LINMIGPD_01710 2.8e-23 relB L Addiction module antitoxin, RelB DinJ family
LINMIGPD_01711 8.1e-17 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
LINMIGPD_01712 1.2e-222 patA 2.6.1.1 E Aminotransferase
LINMIGPD_01713 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
LINMIGPD_01714 5.8e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
LINMIGPD_01715 6e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
LINMIGPD_01716 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LINMIGPD_01717 8.5e-60
LINMIGPD_01718 6.5e-176 prmA J Ribosomal protein L11 methyltransferase
LINMIGPD_01719 8.2e-85 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LINMIGPD_01720 5.9e-37 M domain protein
LINMIGPD_01722 6.5e-249 yjjP S Putative threonine/serine exporter
LINMIGPD_01723 2.6e-177 citR K Putative sugar-binding domain
LINMIGPD_01724 1.5e-50
LINMIGPD_01725 9.5e-09
LINMIGPD_01726 2.9e-66 S Domain of unknown function DUF1828
LINMIGPD_01727 1.5e-95 S UPF0397 protein
LINMIGPD_01728 0.0 ykoD P ABC transporter, ATP-binding protein
LINMIGPD_01729 3.6e-146 cbiQ P cobalt transport
LINMIGPD_01730 3.5e-21
LINMIGPD_01731 9.3e-72 yeaL S Protein of unknown function (DUF441)
LINMIGPD_01732 2.1e-288 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
LINMIGPD_01733 2.4e-167 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
LINMIGPD_01734 1.2e-43 citD C Covalent carrier of the coenzyme of citrate lyase
LINMIGPD_01735 6.9e-195 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
LINMIGPD_01736 1.7e-153 ydjP I Alpha/beta hydrolase family
LINMIGPD_01737 2.5e-226 pbuG S permease
LINMIGPD_01738 9.7e-146 S haloacid dehalogenase-like hydrolase
LINMIGPD_01739 2e-225 S cog cog1373
LINMIGPD_01740 6.1e-61 K Transcriptional regulator
LINMIGPD_01741 1.3e-94 K Transcriptional regulator
LINMIGPD_01742 1.8e-48 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
LINMIGPD_01743 3.1e-16 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
LINMIGPD_01744 2.5e-40 relB L Addiction module antitoxin, RelB DinJ family
LINMIGPD_01745 4.4e-151 S Metal-independent alpha-mannosidase (GH125)
LINMIGPD_01746 3.8e-184 manA 5.3.1.8 G mannose-6-phosphate isomerase
LINMIGPD_01747 1.5e-18 S CRISPR-associated protein (Cas_Csn2)
LINMIGPD_01748 1.2e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
LINMIGPD_01749 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
LINMIGPD_01750 3.5e-71 yqeY S YqeY-like protein
LINMIGPD_01751 1.1e-175 phoH T phosphate starvation-inducible protein PhoH
LINMIGPD_01752 2.2e-93 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LINMIGPD_01753 2.1e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LINMIGPD_01754 4.4e-135 recO L Involved in DNA repair and RecF pathway recombination
LINMIGPD_01755 3.3e-183 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
LINMIGPD_01756 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
LINMIGPD_01757 1e-167 cvfB S S1 domain
LINMIGPD_01758 2.9e-165 xerD D recombinase XerD
LINMIGPD_01759 2.6e-61 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LINMIGPD_01760 7.6e-132 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
LINMIGPD_01761 4.1e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LINMIGPD_01762 3.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
LINMIGPD_01763 8.7e-114 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
LINMIGPD_01764 2.7e-18 M Lysin motif
LINMIGPD_01765 2.2e-114 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
LINMIGPD_01766 1.4e-24 rpsA 1.17.7.4 J Ribosomal protein S1
LINMIGPD_01767 1.9e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
LINMIGPD_01768 2.3e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
LINMIGPD_01769 1.4e-75 S Tetratricopeptide repeat protein
LINMIGPD_01770 3.8e-99 S Tetratricopeptide repeat protein
LINMIGPD_01771 1.3e-237 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LINMIGPD_01772 1.3e-172 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LINMIGPD_01773 1.1e-147 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
LINMIGPD_01774 4.5e-39 veg S Biofilm formation stimulator VEG
LINMIGPD_01775 3e-151 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
LINMIGPD_01776 1e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LINMIGPD_01777 1e-147 tatD L hydrolase, TatD family
LINMIGPD_01778 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LINMIGPD_01779 1e-307 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
LINMIGPD_01780 1.5e-132 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
LINMIGPD_01781 2e-103 S TPM domain
LINMIGPD_01782 1.8e-89 comEB 3.5.4.12 F MafB19-like deaminase
LINMIGPD_01783 3.7e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
LINMIGPD_01784 1.2e-111 E Belongs to the SOS response-associated peptidase family
LINMIGPD_01786 7.9e-112
LINMIGPD_01787 7.5e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LINMIGPD_01788 2.9e-67 hsp O Belongs to the small heat shock protein (HSP20) family
LINMIGPD_01789 5.2e-256 pepC 3.4.22.40 E aminopeptidase
LINMIGPD_01790 1.9e-175 oppF P Belongs to the ABC transporter superfamily
LINMIGPD_01791 2.3e-198 oppD P Belongs to the ABC transporter superfamily
LINMIGPD_01792 8.9e-187 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
LINMIGPD_01793 1.1e-146 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
LINMIGPD_01794 1.4e-209 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
LINMIGPD_01795 8.7e-86 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
LINMIGPD_01796 3.2e-139 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LINMIGPD_01798 8.3e-138 L An automated process has identified a potential problem with this gene model
LINMIGPD_01799 2.8e-48 S Peptidase propeptide and YPEB domain
LINMIGPD_01800 4.1e-33 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
LINMIGPD_01802 1.6e-25 K Helix-turn-helix XRE-family like proteins
LINMIGPD_01803 1.2e-11
LINMIGPD_01804 1.5e-216 2.1.1.14 E methionine synthase, vitamin-B12 independent
LINMIGPD_01805 6.7e-89 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
LINMIGPD_01806 2e-264 lctP C L-lactate permease
LINMIGPD_01807 5e-129 znuB U ABC 3 transport family
LINMIGPD_01808 1.6e-117 fhuC P ABC transporter
LINMIGPD_01809 1.6e-147 psaA P Belongs to the bacterial solute-binding protein 9 family
LINMIGPD_01810 5.4e-41 K helix_turn_helix, Arsenical Resistance Operon Repressor
LINMIGPD_01811 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
LINMIGPD_01812 2.2e-168 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
LINMIGPD_01813 1.8e-136 fruR K DeoR C terminal sensor domain
LINMIGPD_01814 1.8e-218 natB CP ABC-2 family transporter protein
LINMIGPD_01815 1.1e-164 natA S ABC transporter, ATP-binding protein
LINMIGPD_01816 1.7e-67
LINMIGPD_01817 2e-23
LINMIGPD_01818 2.4e-30 yozG K Transcriptional regulator
LINMIGPD_01819 3.7e-83
LINMIGPD_01820 3e-21
LINMIGPD_01821 2.1e-299 E Amino acid permease
LINMIGPD_01822 5e-176 D Alpha beta
LINMIGPD_01823 7.7e-301 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LINMIGPD_01824 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
LINMIGPD_01825 8.3e-143 licT K CAT RNA binding domain
LINMIGPD_01826 3.8e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
LINMIGPD_01827 2.1e-84 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LINMIGPD_01828 1.6e-118
LINMIGPD_01829 1.8e-75 K Penicillinase repressor
LINMIGPD_01830 1.4e-147 S hydrolase
LINMIGPD_01831 3.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LINMIGPD_01832 2e-172 ybbR S YbbR-like protein
LINMIGPD_01833 6.4e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
LINMIGPD_01834 7.3e-208 potD P ABC transporter
LINMIGPD_01835 4.8e-127 potC P ABC transporter permease
LINMIGPD_01836 1.3e-129 potB P ABC transporter permease
LINMIGPD_01837 1.8e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
LINMIGPD_01838 2e-163 murB 1.3.1.98 M Cell wall formation
LINMIGPD_01839 4e-98 dnaQ 2.7.7.7 L DNA polymerase III
LINMIGPD_01840 7e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
LINMIGPD_01841 4.1e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
LINMIGPD_01842 9.7e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LINMIGPD_01843 9.9e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
LINMIGPD_01844 1.2e-94
LINMIGPD_01845 9.7e-83 S An automated process has identified a potential problem with this gene model
LINMIGPD_01846 1e-137 S Protein of unknown function (DUF3100)
LINMIGPD_01847 2.7e-246 3.5.1.47 S Peptidase dimerisation domain
LINMIGPD_01848 3.4e-163 Q Imidazolonepropionase and related amidohydrolases
LINMIGPD_01849 2.8e-54 Q Imidazolonepropionase and related amidohydrolases
LINMIGPD_01850 0.0 oppA E ABC transporter
LINMIGPD_01851 1.2e-151 S Sucrose-6F-phosphate phosphohydrolase
LINMIGPD_01852 0.0 mco Q Multicopper oxidase
LINMIGPD_01853 1.9e-25
LINMIGPD_01854 7.1e-158 metQ1 P Belongs to the nlpA lipoprotein family
LINMIGPD_01855 4.3e-169 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
LINMIGPD_01856 2e-61 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LINMIGPD_01857 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LINMIGPD_01858 7.1e-200 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LINMIGPD_01859 1e-156 cjaA ET ABC transporter substrate-binding protein
LINMIGPD_01860 1.5e-127 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
LINMIGPD_01861 5.3e-116 P ABC transporter permease
LINMIGPD_01862 9.1e-54 papP P ABC transporter, permease protein
LINMIGPD_01863 2e-169 celD G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LINMIGPD_01864 3.5e-70 S Domain of unknown function (DUF3284)
LINMIGPD_01865 4.5e-301 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LINMIGPD_01866 3.7e-131 gmuR K UTRA
LINMIGPD_01867 0.0 XK27_08315 M Sulfatase
LINMIGPD_01868 1.6e-111 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
LINMIGPD_01869 2.7e-202 brpA K Cell envelope-like function transcriptional attenuator common domain protein
LINMIGPD_01870 1.4e-98 G Aldose 1-epimerase
LINMIGPD_01871 5e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LINMIGPD_01872 2.1e-116
LINMIGPD_01873 2.1e-130
LINMIGPD_01874 2.1e-161 S Oxidoreductase family, NAD-binding Rossmann fold
LINMIGPD_01875 1.7e-106 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
LINMIGPD_01876 0.0 yjbQ P TrkA C-terminal domain protein
LINMIGPD_01877 2.5e-179 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
LINMIGPD_01878 5.4e-215 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
LINMIGPD_01880 2.3e-102 S SLAP domain
LINMIGPD_01881 8.6e-26 3.6.4.12 S PD-(D/E)XK nuclease family transposase
LINMIGPD_01882 4.3e-145 3.6.4.12 S PD-(D/E)XK nuclease family transposase
LINMIGPD_01883 1.1e-25
LINMIGPD_01884 1.2e-77 K DNA-templated transcription, initiation
LINMIGPD_01885 8.4e-56 S Domain of unknown function (DUF4767)
LINMIGPD_01886 5.8e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
LINMIGPD_01887 2.5e-147 yitS S Uncharacterised protein, DegV family COG1307
LINMIGPD_01888 3.2e-101 3.6.1.27 I Acid phosphatase homologues
LINMIGPD_01889 2.4e-44
LINMIGPD_01890 1.3e-284 lsa S ABC transporter
LINMIGPD_01891 7.3e-175 EGP Sugar (and other) transporter
LINMIGPD_01892 1.2e-18
LINMIGPD_01893 8e-210
LINMIGPD_01894 3.5e-136 S SLAP domain
LINMIGPD_01895 1.3e-117 S SLAP domain
LINMIGPD_01896 9.1e-106 S Bacteriocin helveticin-J
LINMIGPD_01897 1.2e-44
LINMIGPD_01898 3.7e-58 ps115 K Helix-turn-helix XRE-family like proteins
LINMIGPD_01899 4e-32 E Zn peptidase
LINMIGPD_01900 3.9e-287 clcA P chloride
LINMIGPD_01902 3.3e-11 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LINMIGPD_01903 4.6e-109 ylbE GM NAD(P)H-binding
LINMIGPD_01904 7.6e-94 S VanZ like family
LINMIGPD_01905 8.9e-133 yebC K Transcriptional regulatory protein
LINMIGPD_01906 1.7e-179 comGA NU Type II IV secretion system protein
LINMIGPD_01907 1.7e-171 comGB NU type II secretion system
LINMIGPD_01908 3.1e-43 comGC U competence protein ComGC
LINMIGPD_01909 1.8e-69
LINMIGPD_01910 2.3e-41
LINMIGPD_01911 5e-77 comGF U Putative Competence protein ComGF
LINMIGPD_01912 1.6e-21
LINMIGPD_01913 1.9e-186 ytxK 2.1.1.72 L N-6 DNA Methylase
LINMIGPD_01914 6.3e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LINMIGPD_01916 5e-151 L Belongs to the 'phage' integrase family
LINMIGPD_01917 3.4e-09 S Pfam:DUF955
LINMIGPD_01918 2.2e-25 K Helix-turn-helix domain
LINMIGPD_01919 1.3e-20 XK27_07105 K Helix-turn-helix XRE-family like proteins
LINMIGPD_01920 4.9e-30 K Helix-turn-helix domain
LINMIGPD_01921 1.5e-26 S Domain of unknown function (DUF771)
LINMIGPD_01929 3.6e-34 S Phage derived protein Gp49-like (DUF891)
LINMIGPD_01930 7.1e-35 K Helix-turn-helix XRE-family like proteins
LINMIGPD_01932 1.1e-188 L N-6 DNA Methylase
LINMIGPD_01933 2.2e-26 S Type I restriction modification DNA specificity domain
LINMIGPD_01934 5.7e-11 S Single-strand binding protein family
LINMIGPD_01939 3.1e-24 S SLAP domain
LINMIGPD_01940 6.3e-25 srtA 3.4.22.70 M sortase family
LINMIGPD_01942 1.3e-41 M domain protein
LINMIGPD_01943 7.1e-15 S SLAP domain
LINMIGPD_01944 1.6e-31 M domain protein
LINMIGPD_01948 4.5e-140 U TraM recognition site of TraD and TraG
LINMIGPD_01949 3.9e-32 I mechanosensitive ion channel activity
LINMIGPD_01951 8.4e-15
LINMIGPD_01952 1.8e-159 trsE S COG0433 Predicted ATPase
LINMIGPD_01953 9.4e-33 M Peptidase family M23
LINMIGPD_01956 2.9e-16 CO COG0526, thiol-disulfide isomerase and thioredoxins
LINMIGPD_01959 2.3e-159
LINMIGPD_01961 2.5e-32
LINMIGPD_01962 2.4e-151 EG EamA-like transporter family
LINMIGPD_01963 3.8e-165 EG EamA-like transporter family
LINMIGPD_01964 3e-93 yicL EG EamA-like transporter family
LINMIGPD_01965 4.3e-107
LINMIGPD_01966 1.1e-110
LINMIGPD_01967 5.8e-186 XK27_05540 S DUF218 domain
LINMIGPD_01968 5.5e-264 yheS_2 S ATPases associated with a variety of cellular activities
LINMIGPD_01969 1.6e-88
LINMIGPD_01970 1.9e-56
LINMIGPD_01971 2.5e-247 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LINMIGPD_01972 6.4e-251 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LINMIGPD_01973 2.1e-185 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
LINMIGPD_01976 3.9e-206 4.2.1.126 S Bacterial protein of unknown function (DUF871)
LINMIGPD_01977 3.2e-189 asnA 6.3.1.1 F aspartate--ammonia ligase
LINMIGPD_01978 1.8e-230 steT_1 E amino acid
LINMIGPD_01979 2.2e-139 puuD S peptidase C26
LINMIGPD_01981 2.4e-172 V HNH endonuclease
LINMIGPD_01982 6.4e-135 S PFAM Archaeal ATPase
LINMIGPD_01983 9.2e-248 yifK E Amino acid permease
LINMIGPD_01984 9.7e-234 cycA E Amino acid permease
LINMIGPD_01985 4.3e-115 lepB 3.4.21.89 U Belongs to the peptidase S26 family
LINMIGPD_01986 0.0 clpE O AAA domain (Cdc48 subfamily)
LINMIGPD_01987 2.2e-165 S Alpha/beta hydrolase of unknown function (DUF915)
LINMIGPD_01988 2.2e-238 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LINMIGPD_01989 5.1e-125 XK27_06785 V ABC transporter, ATP-binding protein
LINMIGPD_01990 0.0 XK27_06780 V ABC transporter permease
LINMIGPD_01991 1.9e-36
LINMIGPD_01992 7.9e-291 ytgP S Polysaccharide biosynthesis protein
LINMIGPD_01993 2.7e-137 lysA2 M Glycosyl hydrolases family 25
LINMIGPD_01994 2.3e-133 S Protein of unknown function (DUF975)
LINMIGPD_01995 7.6e-177 pbpX2 V Beta-lactamase
LINMIGPD_01996 1.5e-247 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
LINMIGPD_01997 1.7e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LINMIGPD_01998 1.9e-236 dltB M MBOAT, membrane-bound O-acyltransferase family
LINMIGPD_01999 2.1e-285 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LINMIGPD_02000 1.2e-18 S D-Ala-teichoic acid biosynthesis protein
LINMIGPD_02001 4.1e-44
LINMIGPD_02002 1e-207 ywhK S Membrane
LINMIGPD_02003 1.5e-80 ykuL S (CBS) domain
LINMIGPD_02004 0.0 cadA P P-type ATPase
LINMIGPD_02005 2.8e-205 napA P Sodium/hydrogen exchanger family
LINMIGPD_02006 1.9e-47 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
LINMIGPD_02007 2.3e-41 S YoeB-like toxin of bacterial type II toxin-antitoxin system
LINMIGPD_02008 4.1e-276 V ABC transporter transmembrane region
LINMIGPD_02009 2.6e-155 mutR K Helix-turn-helix XRE-family like proteins
LINMIGPD_02010 5.4e-51
LINMIGPD_02011 4.2e-154 EGP Major facilitator Superfamily
LINMIGPD_02012 3e-111 ropB K Transcriptional regulator
LINMIGPD_02013 2.7e-120 S CAAX protease self-immunity
LINMIGPD_02014 1.6e-194 S DUF218 domain
LINMIGPD_02015 0.0 macB_3 V ABC transporter, ATP-binding protein
LINMIGPD_02016 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
LINMIGPD_02017 2.8e-100 S ECF transporter, substrate-specific component
LINMIGPD_02018 3.9e-201 tcsA S ABC transporter substrate-binding protein PnrA-like
LINMIGPD_02019 2.6e-180 tcsA S ABC transporter substrate-binding protein PnrA-like
LINMIGPD_02020 1.3e-282 xylG 3.6.3.17 S ABC transporter
LINMIGPD_02021 1.9e-198 yufP S Belongs to the binding-protein-dependent transport system permease family
LINMIGPD_02022 4.4e-172 yufQ S Belongs to the binding-protein-dependent transport system permease family
LINMIGPD_02023 3.7e-159 yeaE S Aldo/keto reductase family
LINMIGPD_02024 2.1e-134 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
LINMIGPD_02025 1.2e-91 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
LINMIGPD_02026 9.3e-124 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
LINMIGPD_02027 9.4e-72
LINMIGPD_02028 8.2e-140 cof S haloacid dehalogenase-like hydrolase
LINMIGPD_02029 8.2e-230 pbuG S permease
LINMIGPD_02030 2.1e-76 S ABC-2 family transporter protein
LINMIGPD_02031 4.7e-60 S ABC-2 family transporter protein
LINMIGPD_02032 2.4e-92 V ABC transporter, ATP-binding protein

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)