ORF_ID e_value Gene_name EC_number CAZy COGs Description
DOKAKFNJ_00001 4e-98 rihB 3.2.2.1 F Nucleoside
DOKAKFNJ_00002 3.2e-72 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
DOKAKFNJ_00003 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
DOKAKFNJ_00004 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
DOKAKFNJ_00005 1.1e-152 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
DOKAKFNJ_00006 8.6e-199 tnpB L Putative transposase DNA-binding domain
DOKAKFNJ_00007 4.2e-84 yqeG S HAD phosphatase, family IIIA
DOKAKFNJ_00008 4.4e-200 yqeH S Ribosome biogenesis GTPase YqeH
DOKAKFNJ_00009 4.4e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
DOKAKFNJ_00010 4.3e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
DOKAKFNJ_00011 2e-58 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
DOKAKFNJ_00012 4.6e-216 ylbM S Belongs to the UPF0348 family
DOKAKFNJ_00013 4.7e-97 yceD S Uncharacterized ACR, COG1399
DOKAKFNJ_00014 1.2e-126 K response regulator
DOKAKFNJ_00015 1.1e-276 arlS 2.7.13.3 T Histidine kinase
DOKAKFNJ_00016 1e-12
DOKAKFNJ_00017 9.2e-100 S CAAX protease self-immunity
DOKAKFNJ_00018 6.1e-224 S SLAP domain
DOKAKFNJ_00019 1.3e-82 S Aminoacyl-tRNA editing domain
DOKAKFNJ_00020 2.2e-163 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
DOKAKFNJ_00021 2.4e-43 acyP 3.6.1.7 C Belongs to the acylphosphatase family
DOKAKFNJ_00022 7.7e-135 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DOKAKFNJ_00023 4.5e-58 yodB K Transcriptional regulator, HxlR family
DOKAKFNJ_00025 2.7e-107 papP P ABC transporter, permease protein
DOKAKFNJ_00026 5.3e-116 P ABC transporter permease
DOKAKFNJ_00027 2.2e-126 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
DOKAKFNJ_00028 6.2e-157 cjaA ET ABC transporter substrate-binding protein
DOKAKFNJ_00029 7.1e-200 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
DOKAKFNJ_00030 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
DOKAKFNJ_00031 4.9e-63 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
DOKAKFNJ_00032 3.7e-168 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
DOKAKFNJ_00033 9.1e-137 metQ1 P Belongs to the nlpA lipoprotein family
DOKAKFNJ_00034 1.9e-25
DOKAKFNJ_00035 0.0 mco Q Multicopper oxidase
DOKAKFNJ_00036 1.2e-151 S Sucrose-6F-phosphate phosphohydrolase
DOKAKFNJ_00037 0.0 oppA E ABC transporter
DOKAKFNJ_00038 4e-231 Q Imidazolonepropionase and related amidohydrolases
DOKAKFNJ_00039 2.7e-246 3.5.1.47 S Peptidase dimerisation domain
DOKAKFNJ_00040 3e-137 S Protein of unknown function (DUF3100)
DOKAKFNJ_00041 5.7e-46 S An automated process has identified a potential problem with this gene model
DOKAKFNJ_00042 2.6e-51 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
DOKAKFNJ_00043 2.2e-113 S SLAP domain
DOKAKFNJ_00044 2.7e-285 lsa S ABC transporter
DOKAKFNJ_00045 1.5e-43
DOKAKFNJ_00046 3.4e-123 sdaAB 4.3.1.17 E Serine dehydratase beta chain
DOKAKFNJ_00047 8.5e-154 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
DOKAKFNJ_00048 3.3e-52 S Iron-sulfur cluster assembly protein
DOKAKFNJ_00049 5.3e-163 L Transposase
DOKAKFNJ_00050 1.2e-94 L Transposase
DOKAKFNJ_00051 9.7e-136 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
DOKAKFNJ_00052 2e-241 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
DOKAKFNJ_00053 4.4e-222 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DOKAKFNJ_00054 3.2e-278 yjeM E Amino Acid
DOKAKFNJ_00055 4.5e-49 S Fic/DOC family
DOKAKFNJ_00056 2.8e-08 S Fic/DOC family
DOKAKFNJ_00057 3.1e-278
DOKAKFNJ_00058 3.2e-77
DOKAKFNJ_00059 2.3e-87 S Protein of unknown function (DUF805)
DOKAKFNJ_00060 5.6e-68 O OsmC-like protein
DOKAKFNJ_00061 6.7e-207 EGP Major facilitator Superfamily
DOKAKFNJ_00062 2.5e-215 sptS 2.7.13.3 T Histidine kinase
DOKAKFNJ_00063 1.3e-65 K response regulator
DOKAKFNJ_00064 6e-27 K response regulator
DOKAKFNJ_00065 7.5e-109 2.7.6.5 T Region found in RelA / SpoT proteins
DOKAKFNJ_00066 6.2e-271 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
DOKAKFNJ_00067 0.0 rafA 3.2.1.22 G alpha-galactosidase
DOKAKFNJ_00068 2.8e-210 msmX P Belongs to the ABC transporter superfamily
DOKAKFNJ_00069 2e-152 msmG P Binding-protein-dependent transport system inner membrane component
DOKAKFNJ_00070 4.8e-157 msmF P Binding-protein-dependent transport system inner membrane component
DOKAKFNJ_00071 2.3e-237 msmE G Bacterial extracellular solute-binding protein
DOKAKFNJ_00072 1.6e-158 scrR K Periplasmic binding protein domain
DOKAKFNJ_00073 5.5e-36
DOKAKFNJ_00074 2.2e-198 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
DOKAKFNJ_00075 2.9e-277 V ABC transporter transmembrane region
DOKAKFNJ_00076 2.1e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
DOKAKFNJ_00077 3.1e-130 T Transcriptional regulatory protein, C terminal
DOKAKFNJ_00078 5.2e-187 T GHKL domain
DOKAKFNJ_00079 5.8e-76 S Peptidase propeptide and YPEB domain
DOKAKFNJ_00080 2.5e-72 S Peptidase propeptide and YPEB domain
DOKAKFNJ_00081 4.7e-83 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
DOKAKFNJ_00082 3.8e-65 yybA 2.3.1.57 K Transcriptional regulator
DOKAKFNJ_00083 7e-68 V ABC transporter transmembrane region
DOKAKFNJ_00084 9e-161 V ABC transporter transmembrane region
DOKAKFNJ_00085 3.1e-87 gtcA S Teichoic acid glycosylation protein
DOKAKFNJ_00086 4.1e-80 fld C Flavodoxin
DOKAKFNJ_00087 6.5e-164 map 3.4.11.18 E Methionine Aminopeptidase
DOKAKFNJ_00088 8e-163 yihY S Belongs to the UPF0761 family
DOKAKFNJ_00089 7.3e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
DOKAKFNJ_00090 5.6e-214 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
DOKAKFNJ_00091 5.9e-214 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
DOKAKFNJ_00092 1.2e-216 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
DOKAKFNJ_00093 1e-44
DOKAKFNJ_00094 2.9e-27 D Alpha beta
DOKAKFNJ_00095 2.2e-119 D Alpha beta
DOKAKFNJ_00096 1.2e-263 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DOKAKFNJ_00097 3e-145 recX 2.4.1.337 GT4 S Regulatory protein RecX
DOKAKFNJ_00098 7.8e-85
DOKAKFNJ_00099 1.6e-74
DOKAKFNJ_00100 1.2e-141 hlyX S Transporter associated domain
DOKAKFNJ_00101 2.1e-304 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
DOKAKFNJ_00102 8.7e-44 XK27_09445 S Domain of unknown function (DUF1827)
DOKAKFNJ_00103 0.0 clpE O Belongs to the ClpA ClpB family
DOKAKFNJ_00104 8.5e-41 ptsH G phosphocarrier protein HPR
DOKAKFNJ_00105 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
DOKAKFNJ_00106 3.9e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
DOKAKFNJ_00107 8.5e-139 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
DOKAKFNJ_00108 3.3e-122 coiA 3.6.4.12 S Competence protein
DOKAKFNJ_00109 4e-13 coiA 3.6.4.12 S Competence protein
DOKAKFNJ_00110 4.6e-114 yjbH Q Thioredoxin
DOKAKFNJ_00111 5.2e-110 yjbK S CYTH
DOKAKFNJ_00112 1.2e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
DOKAKFNJ_00113 3.8e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
DOKAKFNJ_00114 6.4e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
DOKAKFNJ_00115 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
DOKAKFNJ_00116 4.2e-92 S SNARE associated Golgi protein
DOKAKFNJ_00117 1.8e-200 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
DOKAKFNJ_00118 2.2e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
DOKAKFNJ_00119 2.6e-214 yubA S AI-2E family transporter
DOKAKFNJ_00120 4.2e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
DOKAKFNJ_00121 1.7e-69 WQ51_03320 S Protein of unknown function (DUF1149)
DOKAKFNJ_00122 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
DOKAKFNJ_00123 9e-223 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
DOKAKFNJ_00124 1.9e-236 S Peptidase M16
DOKAKFNJ_00125 2.3e-133 IQ Enoyl-(Acyl carrier protein) reductase
DOKAKFNJ_00126 2.1e-95 ymfM S Helix-turn-helix domain
DOKAKFNJ_00127 1.1e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
DOKAKFNJ_00128 4.2e-195 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
DOKAKFNJ_00129 7.4e-220 rny S Endoribonuclease that initiates mRNA decay
DOKAKFNJ_00130 1.3e-210 tagO 2.7.8.33, 2.7.8.35 M transferase
DOKAKFNJ_00131 5.1e-119 yvyE 3.4.13.9 S YigZ family
DOKAKFNJ_00132 4.7e-246 comFA L Helicase C-terminal domain protein
DOKAKFNJ_00133 9.4e-132 comFC S Competence protein
DOKAKFNJ_00134 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
DOKAKFNJ_00135 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
DOKAKFNJ_00136 2.5e-186 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
DOKAKFNJ_00137 5.1e-17
DOKAKFNJ_00138 5.8e-180 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
DOKAKFNJ_00139 9.2e-158 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
DOKAKFNJ_00140 1.1e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
DOKAKFNJ_00141 3.9e-181 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
DOKAKFNJ_00142 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
DOKAKFNJ_00143 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
DOKAKFNJ_00144 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
DOKAKFNJ_00145 4.1e-90 S Short repeat of unknown function (DUF308)
DOKAKFNJ_00146 6.2e-165 rapZ S Displays ATPase and GTPase activities
DOKAKFNJ_00147 4e-195 ybhK S Required for morphogenesis under gluconeogenic growth conditions
DOKAKFNJ_00148 2.1e-171 whiA K May be required for sporulation
DOKAKFNJ_00149 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
DOKAKFNJ_00150 0.0 S SH3-like domain
DOKAKFNJ_00151 4.9e-111 ybbL S ABC transporter, ATP-binding protein
DOKAKFNJ_00152 2.5e-130 ybbM S Uncharacterised protein family (UPF0014)
DOKAKFNJ_00153 0.0 L Plasmid pRiA4b ORF-3-like protein
DOKAKFNJ_00154 1.5e-245 brnQ U Component of the transport system for branched-chain amino acids
DOKAKFNJ_00155 6.2e-93 F Nucleoside 2-deoxyribosyltransferase
DOKAKFNJ_00156 2.1e-188 L COG2826 Transposase and inactivated derivatives, IS30 family
DOKAKFNJ_00157 1.1e-259 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
DOKAKFNJ_00158 7.3e-21 hicA S HicA toxin of bacterial toxin-antitoxin,
DOKAKFNJ_00159 2.8e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
DOKAKFNJ_00160 6.4e-251 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
DOKAKFNJ_00161 7.7e-188 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
DOKAKFNJ_00164 3.9e-206 4.2.1.126 S Bacterial protein of unknown function (DUF871)
DOKAKFNJ_00165 3.2e-189 asnA 6.3.1.1 F aspartate--ammonia ligase
DOKAKFNJ_00166 6.1e-151
DOKAKFNJ_00167 9.8e-239 steT E amino acid
DOKAKFNJ_00168 8.6e-243 steT E amino acid
DOKAKFNJ_00169 4.9e-130 yfeJ 6.3.5.2 F glutamine amidotransferase
DOKAKFNJ_00170 1.9e-147 glnH ET ABC transporter
DOKAKFNJ_00171 1.4e-80 K Transcriptional regulator, MarR family
DOKAKFNJ_00172 1.5e-308 XK27_09600 V ABC transporter, ATP-binding protein
DOKAKFNJ_00173 0.0 V ABC transporter transmembrane region
DOKAKFNJ_00174 8.4e-102 S ABC-type cobalt transport system, permease component
DOKAKFNJ_00175 4.7e-85 G MFS/sugar transport protein
DOKAKFNJ_00176 2.3e-151 G MFS/sugar transport protein
DOKAKFNJ_00177 4.7e-114 udk 2.7.1.48 F Zeta toxin
DOKAKFNJ_00178 1.9e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
DOKAKFNJ_00179 3.4e-149 glnH ET ABC transporter substrate-binding protein
DOKAKFNJ_00180 9.7e-91 gluC P ABC transporter permease
DOKAKFNJ_00181 6.8e-108 glnP P ABC transporter permease
DOKAKFNJ_00182 1.1e-164 S Protein of unknown function (DUF2974)
DOKAKFNJ_00183 3.1e-240 oppA E ABC transporter substrate-binding protein
DOKAKFNJ_00184 2.1e-308 oppA E ABC transporter substrate-binding protein
DOKAKFNJ_00185 1.9e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
DOKAKFNJ_00186 0.0 smc D Required for chromosome condensation and partitioning
DOKAKFNJ_00187 3.6e-161 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
DOKAKFNJ_00188 2.5e-288 pipD E Dipeptidase
DOKAKFNJ_00190 3.4e-23
DOKAKFNJ_00191 4.1e-133 cysA V ABC transporter, ATP-binding protein
DOKAKFNJ_00192 0.0 V FtsX-like permease family
DOKAKFNJ_00193 2.7e-258 yfnA E amino acid
DOKAKFNJ_00194 6e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
DOKAKFNJ_00195 4.9e-228 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
DOKAKFNJ_00196 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
DOKAKFNJ_00197 3.4e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
DOKAKFNJ_00198 3.2e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
DOKAKFNJ_00199 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
DOKAKFNJ_00200 4.6e-213 S SLAP domain
DOKAKFNJ_00201 5.4e-121 ung2 3.2.2.27 L Uracil-DNA glycosylase
DOKAKFNJ_00202 9.8e-146 E GDSL-like Lipase/Acylhydrolase family
DOKAKFNJ_00203 2e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
DOKAKFNJ_00204 3e-38 ynzC S UPF0291 protein
DOKAKFNJ_00205 5.5e-30 yneF S Uncharacterised protein family (UPF0154)
DOKAKFNJ_00206 0.0 mdlA V ABC transporter
DOKAKFNJ_00207 0.0 mdlB V ABC transporter
DOKAKFNJ_00208 0.0 pepO 3.4.24.71 O Peptidase family M13
DOKAKFNJ_00209 3.9e-223 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
DOKAKFNJ_00210 2.9e-116 plsC 2.3.1.51 I Acyltransferase
DOKAKFNJ_00211 3e-195 yabB 2.1.1.223 L Methyltransferase small domain
DOKAKFNJ_00212 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
DOKAKFNJ_00213 3.1e-184 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
DOKAKFNJ_00214 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
DOKAKFNJ_00215 5.3e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
DOKAKFNJ_00216 5.4e-138 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
DOKAKFNJ_00217 8.4e-140 cdsA 2.7.7.41 I Belongs to the CDS family
DOKAKFNJ_00218 5.7e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
DOKAKFNJ_00219 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
DOKAKFNJ_00220 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DOKAKFNJ_00221 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
DOKAKFNJ_00222 1.4e-196 nusA K Participates in both transcription termination and antitermination
DOKAKFNJ_00223 8.8e-47 ylxR K Protein of unknown function (DUF448)
DOKAKFNJ_00224 3.2e-47 rplGA J ribosomal protein
DOKAKFNJ_00225 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
DOKAKFNJ_00226 1.1e-59 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
DOKAKFNJ_00227 1.6e-155 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
DOKAKFNJ_00228 3.2e-175 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
DOKAKFNJ_00229 4.9e-193 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
DOKAKFNJ_00230 8e-68 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
DOKAKFNJ_00231 0.0 dnaK O Heat shock 70 kDa protein
DOKAKFNJ_00232 2.2e-202 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
DOKAKFNJ_00233 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
DOKAKFNJ_00234 1.5e-102 srtA 3.4.22.70 M sortase family
DOKAKFNJ_00235 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
DOKAKFNJ_00236 1.2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
DOKAKFNJ_00237 5.2e-08
DOKAKFNJ_00238 3e-89 ntd 2.4.2.6 F Nucleoside
DOKAKFNJ_00239 8.6e-87 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
DOKAKFNJ_00240 7.5e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
DOKAKFNJ_00241 8.8e-84 uspA T universal stress protein
DOKAKFNJ_00243 1.2e-161 phnD P Phosphonate ABC transporter
DOKAKFNJ_00244 3e-139 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
DOKAKFNJ_00245 1.4e-120 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
DOKAKFNJ_00246 1.3e-148 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
DOKAKFNJ_00247 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
DOKAKFNJ_00248 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
DOKAKFNJ_00249 1.7e-29 secG U Preprotein translocase
DOKAKFNJ_00250 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
DOKAKFNJ_00251 5.6e-179 S PFAM Archaeal ATPase
DOKAKFNJ_00252 1.8e-193 I transferase activity, transferring acyl groups other than amino-acyl groups
DOKAKFNJ_00253 7.4e-128 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
DOKAKFNJ_00254 6e-171 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
DOKAKFNJ_00255 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
DOKAKFNJ_00256 7.9e-99 M ErfK YbiS YcfS YnhG
DOKAKFNJ_00257 6.4e-151 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
DOKAKFNJ_00258 1.6e-233 dacA 3.4.16.4 M Belongs to the peptidase S11 family
DOKAKFNJ_00260 4.3e-47 pspC KT PspC domain
DOKAKFNJ_00261 6.8e-298 ytgP S Polysaccharide biosynthesis protein
DOKAKFNJ_00262 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
DOKAKFNJ_00263 6.4e-122 3.6.1.27 I Acid phosphatase homologues
DOKAKFNJ_00264 2.6e-169 K LysR substrate binding domain
DOKAKFNJ_00265 1.6e-85 3.6.4.12 S PD-(D/E)XK nuclease family transposase
DOKAKFNJ_00266 1.6e-43 1.3.5.4 C FAD binding domain
DOKAKFNJ_00267 1.2e-230 ndh 1.6.99.3 C NADH dehydrogenase
DOKAKFNJ_00268 3.6e-160 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
DOKAKFNJ_00269 9.5e-29 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
DOKAKFNJ_00270 1.1e-130 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
DOKAKFNJ_00271 2.2e-128 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
DOKAKFNJ_00272 4.1e-269 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
DOKAKFNJ_00273 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
DOKAKFNJ_00274 2.5e-173 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
DOKAKFNJ_00275 6.4e-243 cydA 1.10.3.14 C ubiquinol oxidase
DOKAKFNJ_00276 6.2e-36 licR 2.7.1.200, 2.7.1.202 G Mga helix-turn-helix domain
DOKAKFNJ_00277 0.0 mngB 3.2.1.170, 3.2.1.24 GH38 G Glycosyl hydrolases family 38 N-terminal domain
DOKAKFNJ_00278 1.9e-80 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
DOKAKFNJ_00279 1.4e-115 lacA 2.3.1.79 S Transferase hexapeptide repeat
DOKAKFNJ_00280 9.3e-204 pbpX1 V Beta-lactamase
DOKAKFNJ_00281 2.8e-98 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
DOKAKFNJ_00282 7.5e-95 S ECF-type riboflavin transporter, S component
DOKAKFNJ_00283 1.3e-229 S Putative peptidoglycan binding domain
DOKAKFNJ_00284 9e-83 K Acetyltransferase (GNAT) domain
DOKAKFNJ_00285 2.2e-251 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
DOKAKFNJ_00286 1.2e-190 yrvN L AAA C-terminal domain
DOKAKFNJ_00287 5.7e-65 spxA_2 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
DOKAKFNJ_00288 7.3e-283 treB G phosphotransferase system
DOKAKFNJ_00289 8.9e-101 treR K UTRA
DOKAKFNJ_00290 1e-288 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
DOKAKFNJ_00291 9.4e-269 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
DOKAKFNJ_00292 6.6e-44
DOKAKFNJ_00293 1.6e-171 2.7.1.2 GK ROK family
DOKAKFNJ_00294 4.8e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DOKAKFNJ_00295 2e-295 S SLAP domain
DOKAKFNJ_00296 5.3e-80
DOKAKFNJ_00297 3.2e-10 S Domain of unknown function DUF87
DOKAKFNJ_00298 1.2e-63 S SIR2-like domain
DOKAKFNJ_00299 1.7e-98 3.1.21.3 V Type I restriction modification DNA specificity domain
DOKAKFNJ_00300 1.9e-259 hsdM 2.1.1.72 V type I restriction-modification system
DOKAKFNJ_00301 3.4e-42 S RloB-like protein
DOKAKFNJ_00302 1.2e-164 S AAA domain, putative AbiEii toxin, Type IV TA system
DOKAKFNJ_00303 0.0 hsdR 3.1.21.3 L DEAD/DEAH box helicase
DOKAKFNJ_00304 0.0 S SLAP domain
DOKAKFNJ_00306 1.1e-236 XK27_01810 S Calcineurin-like phosphoesterase
DOKAKFNJ_00307 1e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
DOKAKFNJ_00308 1.1e-27 G Bacterial extracellular solute-binding protein
DOKAKFNJ_00309 7.1e-19
DOKAKFNJ_00311 7.2e-182 M Glycosyl hydrolases family 25
DOKAKFNJ_00312 6.1e-27
DOKAKFNJ_00313 7e-16
DOKAKFNJ_00315 1.7e-16
DOKAKFNJ_00317 4.9e-12
DOKAKFNJ_00323 3.4e-35
DOKAKFNJ_00324 1.4e-09
DOKAKFNJ_00325 9.7e-113 Z012_12235 S Baseplate J-like protein
DOKAKFNJ_00326 7.4e-29
DOKAKFNJ_00327 5.9e-37
DOKAKFNJ_00328 1.9e-102
DOKAKFNJ_00329 2.7e-46
DOKAKFNJ_00330 3.8e-59 M LysM domain
DOKAKFNJ_00331 9.4e-219 3.4.14.13 M Phage tail tape measure protein TP901
DOKAKFNJ_00333 2.9e-09
DOKAKFNJ_00334 9.3e-29
DOKAKFNJ_00335 3.5e-103 Z012_02110 S Protein of unknown function (DUF3383)
DOKAKFNJ_00336 4.3e-31
DOKAKFNJ_00337 1.6e-25
DOKAKFNJ_00338 1e-29
DOKAKFNJ_00339 9.2e-20 S Protein of unknown function (DUF4054)
DOKAKFNJ_00340 2.4e-93 Z012_11565 S Uncharacterized protein conserved in bacteria (DUF2184)
DOKAKFNJ_00341 4.1e-34
DOKAKFNJ_00342 1.6e-57 S Uncharacterized protein conserved in bacteria (DUF2213)
DOKAKFNJ_00343 5e-12 S Lysin motif
DOKAKFNJ_00344 1.3e-47 S Phage Mu protein F like protein
DOKAKFNJ_00345 6.2e-135 S Protein of unknown function (DUF1073)
DOKAKFNJ_00346 1.1e-201 S Terminase-like family
DOKAKFNJ_00347 3e-19 ps333 L Terminase small subunit
DOKAKFNJ_00350 3.3e-09 arpU S Phage transcriptional regulator, ArpU family
DOKAKFNJ_00353 3.8e-219 XK27_11280 S Psort location CytoplasmicMembrane, score
DOKAKFNJ_00363 5.8e-20 L Psort location Cytoplasmic, score
DOKAKFNJ_00364 2.5e-43 S Protein of unknown function (DUF1071)
DOKAKFNJ_00366 7.7e-48
DOKAKFNJ_00369 6.8e-08
DOKAKFNJ_00371 2.3e-88 S AntA/AntB antirepressor
DOKAKFNJ_00373 3.7e-13
DOKAKFNJ_00374 3.1e-12
DOKAKFNJ_00375 3.7e-18 ps115 K sequence-specific DNA binding
DOKAKFNJ_00376 3e-14 S Pfam:Peptidase_M78
DOKAKFNJ_00377 1.2e-54 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
DOKAKFNJ_00378 7.5e-12
DOKAKFNJ_00382 2.8e-176 sip L Belongs to the 'phage' integrase family
DOKAKFNJ_00383 7.1e-19
DOKAKFNJ_00385 7.2e-182 M Glycosyl hydrolases family 25
DOKAKFNJ_00386 6.1e-27
DOKAKFNJ_00387 7e-16
DOKAKFNJ_00389 1.7e-16
DOKAKFNJ_00391 4.9e-12
DOKAKFNJ_00397 3.4e-35
DOKAKFNJ_00398 1.4e-09
DOKAKFNJ_00399 9.7e-113 Z012_12235 S Baseplate J-like protein
DOKAKFNJ_00400 7.4e-29
DOKAKFNJ_00401 5.9e-37
DOKAKFNJ_00402 1.9e-102
DOKAKFNJ_00403 2.7e-46
DOKAKFNJ_00404 3.8e-59 M LysM domain
DOKAKFNJ_00405 9.4e-219 3.4.14.13 M Phage tail tape measure protein TP901
DOKAKFNJ_00407 2.9e-09
DOKAKFNJ_00408 9.3e-29
DOKAKFNJ_00409 3.5e-103 Z012_02110 S Protein of unknown function (DUF3383)
DOKAKFNJ_00410 4.3e-31
DOKAKFNJ_00411 1.6e-25
DOKAKFNJ_00412 1e-29
DOKAKFNJ_00413 9.2e-20 S Protein of unknown function (DUF4054)
DOKAKFNJ_00414 2.4e-93 Z012_11565 S Uncharacterized protein conserved in bacteria (DUF2184)
DOKAKFNJ_00415 4.1e-34
DOKAKFNJ_00416 1.6e-57 S Uncharacterized protein conserved in bacteria (DUF2213)
DOKAKFNJ_00417 5e-12 S Lysin motif
DOKAKFNJ_00418 1.3e-47 S Phage Mu protein F like protein
DOKAKFNJ_00419 6.2e-135 S Protein of unknown function (DUF1073)
DOKAKFNJ_00420 1.1e-201 S Terminase-like family
DOKAKFNJ_00421 3e-19 ps333 L Terminase small subunit
DOKAKFNJ_00424 3.3e-09 arpU S Phage transcriptional regulator, ArpU family
DOKAKFNJ_00427 3.8e-219 XK27_11280 S Psort location CytoplasmicMembrane, score
DOKAKFNJ_00437 5.8e-20 L Psort location Cytoplasmic, score
DOKAKFNJ_00438 2.5e-43 S Protein of unknown function (DUF1071)
DOKAKFNJ_00440 7.7e-48
DOKAKFNJ_00443 6.8e-08
DOKAKFNJ_00445 2.3e-88 S AntA/AntB antirepressor
DOKAKFNJ_00447 3.7e-13
DOKAKFNJ_00448 3.1e-12
DOKAKFNJ_00449 3.7e-18 ps115 K sequence-specific DNA binding
DOKAKFNJ_00450 3e-14 S Pfam:Peptidase_M78
DOKAKFNJ_00451 1.2e-54 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
DOKAKFNJ_00452 7.5e-12
DOKAKFNJ_00456 2.8e-176 sip L Belongs to the 'phage' integrase family
DOKAKFNJ_00457 6.7e-184 G Bacterial extracellular solute-binding protein
DOKAKFNJ_00458 5.7e-18
DOKAKFNJ_00459 2e-135 V HNH endonuclease
DOKAKFNJ_00460 6.4e-135 S PFAM Archaeal ATPase
DOKAKFNJ_00461 9.2e-248 yifK E Amino acid permease
DOKAKFNJ_00462 9.7e-234 cycA E Amino acid permease
DOKAKFNJ_00463 4.3e-115 lepB 3.4.21.89 U Belongs to the peptidase S26 family
DOKAKFNJ_00464 0.0 clpE O AAA domain (Cdc48 subfamily)
DOKAKFNJ_00465 2.2e-165 S Alpha/beta hydrolase of unknown function (DUF915)
DOKAKFNJ_00466 2.2e-238 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DOKAKFNJ_00467 5.1e-125 XK27_06785 V ABC transporter, ATP-binding protein
DOKAKFNJ_00468 0.0 XK27_06780 V ABC transporter permease
DOKAKFNJ_00469 1.9e-36
DOKAKFNJ_00470 7.9e-291 ytgP S Polysaccharide biosynthesis protein
DOKAKFNJ_00471 2.7e-137 lysA2 M Glycosyl hydrolases family 25
DOKAKFNJ_00472 2.3e-133 S Protein of unknown function (DUF975)
DOKAKFNJ_00473 7.6e-177 pbpX2 V Beta-lactamase
DOKAKFNJ_00474 1.5e-247 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
DOKAKFNJ_00475 1.7e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
DOKAKFNJ_00476 1.9e-236 dltB M MBOAT, membrane-bound O-acyltransferase family
DOKAKFNJ_00477 2.1e-285 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
DOKAKFNJ_00478 1.2e-18 S D-Ala-teichoic acid biosynthesis protein
DOKAKFNJ_00479 4.1e-44
DOKAKFNJ_00480 1e-207 ywhK S Membrane
DOKAKFNJ_00482 1.3e-57 ykuL S (CBS) domain
DOKAKFNJ_00483 0.0 cadA P P-type ATPase
DOKAKFNJ_00484 2.8e-205 napA P Sodium/hydrogen exchanger family
DOKAKFNJ_00485 1.9e-47 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
DOKAKFNJ_00486 2.3e-41 S YoeB-like toxin of bacterial type II toxin-antitoxin system
DOKAKFNJ_00487 4.1e-276 V ABC transporter transmembrane region
DOKAKFNJ_00488 2.6e-155 mutR K Helix-turn-helix XRE-family like proteins
DOKAKFNJ_00489 5.4e-51
DOKAKFNJ_00490 1.6e-153 EGP Major facilitator Superfamily
DOKAKFNJ_00491 1.6e-109 ropB K Transcriptional regulator
DOKAKFNJ_00492 9.1e-121 S CAAX protease self-immunity
DOKAKFNJ_00493 3.7e-191 S DUF218 domain
DOKAKFNJ_00494 0.0 macB_3 V ABC transporter, ATP-binding protein
DOKAKFNJ_00495 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
DOKAKFNJ_00496 2.8e-100 S ECF transporter, substrate-specific component
DOKAKFNJ_00497 2.3e-201 tcsA S ABC transporter substrate-binding protein PnrA-like
DOKAKFNJ_00498 6.9e-181 tcsA S ABC transporter substrate-binding protein PnrA-like
DOKAKFNJ_00499 1.5e-283 xylG 3.6.3.17 S ABC transporter
DOKAKFNJ_00500 1.9e-198 yufP S Belongs to the binding-protein-dependent transport system permease family
DOKAKFNJ_00501 4.4e-172 yufQ S Belongs to the binding-protein-dependent transport system permease family
DOKAKFNJ_00502 1.1e-68 yeaE S Aldo/keto reductase family
DOKAKFNJ_00503 1.8e-77 yeaE S Aldo/keto reductase family
DOKAKFNJ_00504 2.1e-134 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
DOKAKFNJ_00505 8.5e-119 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
DOKAKFNJ_00506 9.3e-124 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
DOKAKFNJ_00507 9.4e-72
DOKAKFNJ_00508 7e-139 cof S haloacid dehalogenase-like hydrolase
DOKAKFNJ_00509 2.2e-230 pbuG S permease
DOKAKFNJ_00510 2.1e-76 S ABC-2 family transporter protein
DOKAKFNJ_00511 4.7e-60 S ABC-2 family transporter protein
DOKAKFNJ_00512 1.7e-93 V ABC transporter, ATP-binding protein
DOKAKFNJ_00513 1.5e-11 GT2,GT4 M family 8
DOKAKFNJ_00514 7e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
DOKAKFNJ_00515 1.8e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
DOKAKFNJ_00516 5.1e-140 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
DOKAKFNJ_00517 1.3e-116 rsmC 2.1.1.172 J Methyltransferase
DOKAKFNJ_00518 9e-26
DOKAKFNJ_00519 3.3e-126 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
DOKAKFNJ_00520 2.9e-221 ecsB U ABC transporter
DOKAKFNJ_00521 1.7e-134 ecsA V ABC transporter, ATP-binding protein
DOKAKFNJ_00522 8.3e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
DOKAKFNJ_00523 3.9e-25
DOKAKFNJ_00524 1.5e-153 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
DOKAKFNJ_00525 1.5e-72 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
DOKAKFNJ_00526 3.1e-265
DOKAKFNJ_00527 2.4e-51 S Domain of unknown function DUF1829
DOKAKFNJ_00528 2.9e-23
DOKAKFNJ_00529 1.9e-186 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
DOKAKFNJ_00530 0.0 L AAA domain
DOKAKFNJ_00531 1.5e-230 yhaO L Ser Thr phosphatase family protein
DOKAKFNJ_00532 7.2e-56 yheA S Belongs to the UPF0342 family
DOKAKFNJ_00533 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
DOKAKFNJ_00534 6.5e-151 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
DOKAKFNJ_00535 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
DOKAKFNJ_00536 8.9e-10 G Phosphoglycerate mutase family
DOKAKFNJ_00537 2.9e-78 G Phosphoglycerate mutase family
DOKAKFNJ_00538 1.6e-140 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
DOKAKFNJ_00539 5.9e-13 K Acetyltransferase (GNAT) domain
DOKAKFNJ_00540 1.9e-12 L Transposase
DOKAKFNJ_00541 1.4e-16 L Transposase
DOKAKFNJ_00542 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
DOKAKFNJ_00543 5.2e-68 L haloacid dehalogenase-like hydrolase
DOKAKFNJ_00544 4.9e-123 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
DOKAKFNJ_00545 2.1e-128 ulaE 5.1.3.22 G Xylose isomerase-like TIM barrel
DOKAKFNJ_00546 2.8e-90 ulaD 4.1.1.85, 4.1.2.43 G Orotidine 5'-phosphate decarboxylase / HUMPS family
DOKAKFNJ_00547 4.1e-31 sgaB 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
DOKAKFNJ_00548 1.3e-231 ulaA S PTS system sugar-specific permease component
DOKAKFNJ_00549 1.5e-61 cmtB 2.7.1.194, 2.7.1.197, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
DOKAKFNJ_00550 8.1e-175 ulaG S Beta-lactamase superfamily domain
DOKAKFNJ_00551 2e-117 S Peptidase family M23
DOKAKFNJ_00552 1e-104 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DOKAKFNJ_00553 2.2e-69 lysA2 M Glycosyl hydrolases family 25
DOKAKFNJ_00557 6.4e-55 E GDSL-like Lipase/Acylhydrolase
DOKAKFNJ_00561 1.4e-167 S Phage minor structural protein
DOKAKFNJ_00562 1.1e-37 S phage tail
DOKAKFNJ_00563 7e-158 M Phage tail tape measure protein TP901
DOKAKFNJ_00566 1e-25 S Phage tail tube protein
DOKAKFNJ_00567 8.1e-13 S Protein of unknown function (DUF806)
DOKAKFNJ_00568 4.1e-23 S Bacteriophage HK97-gp10, putative tail-component
DOKAKFNJ_00570 7.3e-17 S Phage gp6-like head-tail connector protein
DOKAKFNJ_00571 3.5e-50 S peptidase activity
DOKAKFNJ_00572 1.4e-74 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
DOKAKFNJ_00573 7e-83 S Phage portal protein
DOKAKFNJ_00574 1.5e-124 S PAS domain
DOKAKFNJ_00575 1.6e-11
DOKAKFNJ_00576 2.7e-57
DOKAKFNJ_00577 6.6e-56
DOKAKFNJ_00578 4e-08
DOKAKFNJ_00579 1.4e-31 O OsmC-like protein
DOKAKFNJ_00581 1.5e-36 oppA E ABC transporter substrate-binding protein
DOKAKFNJ_00582 9.6e-103 pgm3 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
DOKAKFNJ_00583 8.8e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
DOKAKFNJ_00584 2.6e-280 thrC 4.2.3.1 E Threonine synthase
DOKAKFNJ_00585 6.6e-221 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
DOKAKFNJ_00586 2.8e-157 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
DOKAKFNJ_00587 2.5e-118
DOKAKFNJ_00588 4.6e-160 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
DOKAKFNJ_00590 2.3e-08 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
DOKAKFNJ_00591 3.1e-122 L Belongs to the 'phage' integrase family
DOKAKFNJ_00592 1.6e-180 V Abi-like protein
DOKAKFNJ_00595 2.5e-30 S Hypothetical protein (DUF2513)
DOKAKFNJ_00596 6.2e-74 3.4.21.88 K Peptidase S24-like
DOKAKFNJ_00597 2.3e-10 K Helix-turn-helix XRE-family like proteins
DOKAKFNJ_00605 1.1e-20 L Psort location Cytoplasmic, score
DOKAKFNJ_00608 1.3e-09
DOKAKFNJ_00609 1.1e-24 S HNH endonuclease
DOKAKFNJ_00614 1e-83 ps308 K AntA/AntB antirepressor
DOKAKFNJ_00620 1.1e-08
DOKAKFNJ_00621 7.8e-62 L HNH nucleases
DOKAKFNJ_00622 2.7e-55 L Phage terminase, small subunit
DOKAKFNJ_00625 7.2e-219 S Phage Terminase
DOKAKFNJ_00627 2.7e-16 S Phage portal protein
DOKAKFNJ_00628 1.1e-71 yslB S Protein of unknown function (DUF2507)
DOKAKFNJ_00629 6.6e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
DOKAKFNJ_00630 6.2e-111 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
DOKAKFNJ_00631 4.4e-40 ropB K Helix-turn-helix domain
DOKAKFNJ_00633 1.6e-105 tag 3.2.2.20 L glycosylase
DOKAKFNJ_00634 3.9e-84
DOKAKFNJ_00635 1.6e-271 S Calcineurin-like phosphoesterase
DOKAKFNJ_00636 0.0 asnB 6.3.5.4 E Asparagine synthase
DOKAKFNJ_00637 5.6e-255 yxbA 6.3.1.12 S ATP-grasp enzyme
DOKAKFNJ_00638 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
DOKAKFNJ_00639 8.7e-141 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
DOKAKFNJ_00640 1.3e-102 S Iron-sulfur cluster assembly protein
DOKAKFNJ_00641 1.5e-230 XK27_04775 S PAS domain
DOKAKFNJ_00642 1.4e-210 yttB EGP Major facilitator Superfamily
DOKAKFNJ_00643 2.8e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
DOKAKFNJ_00644 2.4e-121 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
DOKAKFNJ_00645 3.7e-185
DOKAKFNJ_00646 6.1e-249 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
DOKAKFNJ_00647 1.5e-234 mepA V MATE efflux family protein
DOKAKFNJ_00648 8.4e-171 S SLAP domain
DOKAKFNJ_00649 7.4e-74 L Putative transposase DNA-binding domain
DOKAKFNJ_00650 1.7e-84 L Putative transposase DNA-binding domain
DOKAKFNJ_00651 1.4e-83 L Resolvase, N-terminal
DOKAKFNJ_00652 1.2e-157 M Peptidase family M1 domain
DOKAKFNJ_00653 2.7e-193 S Bacteriocin helveticin-J
DOKAKFNJ_00654 1.6e-18
DOKAKFNJ_00655 2.4e-50 L RelB antitoxin
DOKAKFNJ_00656 9.1e-140 qmcA O prohibitin homologues
DOKAKFNJ_00657 1.9e-199 purD 6.3.4.13 F Belongs to the GARS family
DOKAKFNJ_00658 5e-164 4.2.1.53 S Myosin-crossreactive antigen
DOKAKFNJ_00659 1.2e-177 4.2.1.53 S Myosin-crossreactive antigen
DOKAKFNJ_00660 2.3e-90 yxdD K Bacterial regulatory proteins, tetR family
DOKAKFNJ_00661 9.5e-259 emrY EGP Major facilitator Superfamily
DOKAKFNJ_00666 1.1e-94 MA20_25245 K Acetyltransferase (GNAT) domain
DOKAKFNJ_00667 5.8e-255 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
DOKAKFNJ_00668 1.6e-199 pbpX V Beta-lactamase
DOKAKFNJ_00669 1.3e-230 nhaC C Na H antiporter NhaC
DOKAKFNJ_00670 4.5e-50
DOKAKFNJ_00671 1.2e-105 ybhL S Belongs to the BI1 family
DOKAKFNJ_00672 1.5e-65 K transcriptional regulator
DOKAKFNJ_00673 7.2e-18
DOKAKFNJ_00674 2.7e-171 yegS 2.7.1.107 G Lipid kinase
DOKAKFNJ_00675 4.1e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DOKAKFNJ_00676 5.2e-270 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
DOKAKFNJ_00677 1.5e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
DOKAKFNJ_00678 5.8e-203 camS S sex pheromone
DOKAKFNJ_00679 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
DOKAKFNJ_00680 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
DOKAKFNJ_00681 2.5e-86 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
DOKAKFNJ_00683 4.8e-84 ydcK S Belongs to the SprT family
DOKAKFNJ_00684 7.7e-134 M Glycosyltransferase sugar-binding region containing DXD motif
DOKAKFNJ_00685 3e-257 epsU S Polysaccharide biosynthesis protein
DOKAKFNJ_00686 7e-225 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
DOKAKFNJ_00687 0.0 pacL 3.6.3.8 P P-type ATPase
DOKAKFNJ_00688 1.3e-202 tnpB L Putative transposase DNA-binding domain
DOKAKFNJ_00689 1.2e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
DOKAKFNJ_00690 2.4e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
DOKAKFNJ_00691 2.9e-204 csaB M Glycosyl transferases group 1
DOKAKFNJ_00692 1.2e-134 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
DOKAKFNJ_00693 1.8e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
DOKAKFNJ_00694 2.7e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
DOKAKFNJ_00695 1.9e-291 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
DOKAKFNJ_00696 3.4e-277 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
DOKAKFNJ_00697 6.7e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
DOKAKFNJ_00698 6.6e-139 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
DOKAKFNJ_00699 4.2e-95 sigH K Belongs to the sigma-70 factor family
DOKAKFNJ_00700 1.7e-34
DOKAKFNJ_00701 8.4e-287 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
DOKAKFNJ_00702 2.1e-70 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DOKAKFNJ_00703 1.6e-246 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
DOKAKFNJ_00704 3.6e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
DOKAKFNJ_00705 3.1e-101 nusG K Participates in transcription elongation, termination and antitermination
DOKAKFNJ_00706 1.2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
DOKAKFNJ_00707 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
DOKAKFNJ_00708 2.8e-157 pstS P Phosphate
DOKAKFNJ_00709 4.3e-162 pstC P probably responsible for the translocation of the substrate across the membrane
DOKAKFNJ_00710 1e-154 pstA P Phosphate transport system permease protein PstA
DOKAKFNJ_00711 5e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
DOKAKFNJ_00712 3.9e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
DOKAKFNJ_00713 2.2e-117 phoU P Plays a role in the regulation of phosphate uptake
DOKAKFNJ_00714 2.4e-89 L An automated process has identified a potential problem with this gene model
DOKAKFNJ_00715 9.3e-74 coaA 2.7.1.33 F Pantothenic acid kinase
DOKAKFNJ_00717 3.2e-75 S ECF transporter, substrate-specific component
DOKAKFNJ_00718 1.5e-54 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
DOKAKFNJ_00719 3.7e-144 gltC_1 3.1.3.48 K LysR substrate binding domain
DOKAKFNJ_00720 1.1e-149 2.8.3.1 I Coenzyme A transferase
DOKAKFNJ_00721 1.6e-82 2.8.3.1 I Coenzyme A transferase
DOKAKFNJ_00722 9.3e-151 fabK 1.3.1.9 S Nitronate monooxygenase
DOKAKFNJ_00723 6.1e-111 crt 4.2.1.17 I Enoyl-CoA hydratase/isomerase
DOKAKFNJ_00724 3.5e-108 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
DOKAKFNJ_00725 1.4e-107 yisY 1.11.1.10 S Alpha/beta hydrolase family
DOKAKFNJ_00726 2.8e-125 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
DOKAKFNJ_00727 7.7e-110 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
DOKAKFNJ_00728 5.7e-24 axe1 3.1.1.41 Q Acetyl xylan esterase (AXE1)
DOKAKFNJ_00729 1.3e-67 axe1 3.1.1.41 Q Acetyl xylan esterase (AXE1)
DOKAKFNJ_00730 1e-220 nanT E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
DOKAKFNJ_00731 2.1e-120 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
DOKAKFNJ_00732 3.1e-56 G Xylose isomerase domain protein TIM barrel
DOKAKFNJ_00733 8.4e-90 nanK GK ROK family
DOKAKFNJ_00734 2.6e-123 nanA 4.1.3.3, 4.3.3.7 EM Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
DOKAKFNJ_00735 3.7e-66 K Helix-turn-helix domain, rpiR family
DOKAKFNJ_00736 2.7e-262 E ABC transporter, substratebinding protein
DOKAKFNJ_00738 1.4e-155 S interspecies interaction between organisms
DOKAKFNJ_00739 2.1e-34
DOKAKFNJ_00741 1.2e-31 S protein encoded in hypervariable junctions of pilus gene clusters
DOKAKFNJ_00742 1.4e-13 hicA S HicA toxin of bacterial toxin-antitoxin,
DOKAKFNJ_00743 3.6e-145
DOKAKFNJ_00744 1.5e-169
DOKAKFNJ_00745 2e-263 glnA 6.3.1.2 E glutamine synthetase
DOKAKFNJ_00746 7.6e-225 ynbB 4.4.1.1 P aluminum resistance
DOKAKFNJ_00747 1.9e-167 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
DOKAKFNJ_00748 1.5e-65 yqhL P Rhodanese-like protein
DOKAKFNJ_00749 9.7e-36 yqgQ S Bacterial protein of unknown function (DUF910)
DOKAKFNJ_00750 3.1e-119 gluP 3.4.21.105 S Rhomboid family
DOKAKFNJ_00751 2.7e-97 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
DOKAKFNJ_00752 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
DOKAKFNJ_00753 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
DOKAKFNJ_00754 0.0 S membrane
DOKAKFNJ_00755 5.2e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
DOKAKFNJ_00756 1.3e-38 S RelB antitoxin
DOKAKFNJ_00757 3.4e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
DOKAKFNJ_00758 3.8e-30
DOKAKFNJ_00759 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
DOKAKFNJ_00760 9.4e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
DOKAKFNJ_00761 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
DOKAKFNJ_00762 3.9e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
DOKAKFNJ_00763 8.6e-251 dnaB L Replication initiation and membrane attachment
DOKAKFNJ_00764 1.3e-168 dnaI L Primosomal protein DnaI
DOKAKFNJ_00765 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
DOKAKFNJ_00766 1.1e-56 S Protein of unknown function (DUF3290)
DOKAKFNJ_00767 3e-116 yviA S Protein of unknown function (DUF421)
DOKAKFNJ_00768 5.8e-157 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
DOKAKFNJ_00769 1e-181 dnaQ 2.7.7.7 L EXOIII
DOKAKFNJ_00770 7.2e-158 endA F DNA RNA non-specific endonuclease
DOKAKFNJ_00771 1.6e-282 pipD E Dipeptidase
DOKAKFNJ_00772 9.3e-203 malK P ATPases associated with a variety of cellular activities
DOKAKFNJ_00773 1.6e-157 gtsB P ABC-type sugar transport systems, permease components
DOKAKFNJ_00774 6.1e-146 gtsC P Binding-protein-dependent transport system inner membrane component
DOKAKFNJ_00775 2.4e-258 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
DOKAKFNJ_00776 5.1e-240 G Bacterial extracellular solute-binding protein
DOKAKFNJ_00777 1.8e-154 corA P CorA-like Mg2+ transporter protein
DOKAKFNJ_00778 3.3e-148 3.5.2.6 V Beta-lactamase enzyme family
DOKAKFNJ_00779 5.1e-99 yobS K Bacterial regulatory proteins, tetR family
DOKAKFNJ_00780 0.0 ydgH S MMPL family
DOKAKFNJ_00781 3.4e-107
DOKAKFNJ_00782 1e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
DOKAKFNJ_00783 1.6e-161 htrA 3.4.21.107 O serine protease
DOKAKFNJ_00784 4.1e-147 vicX 3.1.26.11 S domain protein
DOKAKFNJ_00785 3.4e-149 yycI S YycH protein
DOKAKFNJ_00786 3.3e-258 yycH S YycH protein
DOKAKFNJ_00787 2.2e-305 vicK 2.7.13.3 T Histidine kinase
DOKAKFNJ_00788 4.8e-131 K response regulator
DOKAKFNJ_00790 4.9e-34
DOKAKFNJ_00792 4.2e-149 arbV 2.3.1.51 I Acyl-transferase
DOKAKFNJ_00793 1.5e-155 arbx M Glycosyl transferase family 8
DOKAKFNJ_00794 5.8e-112 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
DOKAKFNJ_00795 0.0 uup S ABC transporter, ATP-binding protein
DOKAKFNJ_00796 8.1e-286 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
DOKAKFNJ_00797 3.2e-170 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
DOKAKFNJ_00798 1.3e-51 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
DOKAKFNJ_00799 1.5e-194 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
DOKAKFNJ_00800 4.8e-96 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
DOKAKFNJ_00801 8.2e-134 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
DOKAKFNJ_00802 2.2e-85 S ECF transporter, substrate-specific component
DOKAKFNJ_00803 6.4e-131 fat 3.1.2.21 I Acyl-ACP thioesterase
DOKAKFNJ_00804 2.5e-155 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
DOKAKFNJ_00805 1.8e-59 yabA L Involved in initiation control of chromosome replication
DOKAKFNJ_00806 3.7e-154 holB 2.7.7.7 L DNA polymerase III
DOKAKFNJ_00807 2.2e-51 yaaQ S Cyclic-di-AMP receptor
DOKAKFNJ_00808 7.6e-112 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
DOKAKFNJ_00809 1.1e-34 S Protein of unknown function (DUF2508)
DOKAKFNJ_00810 2.4e-107 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
DOKAKFNJ_00811 2.8e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
DOKAKFNJ_00812 1.2e-35 M lipopolysaccharide 3-alpha-galactosyltransferase activity
DOKAKFNJ_00813 5.7e-106 2.4.1.58 GT8 M family 8
DOKAKFNJ_00814 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
DOKAKFNJ_00815 1.9e-83 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
DOKAKFNJ_00816 9.7e-46 oppA E ABC transporter substrate-binding protein
DOKAKFNJ_00817 5.6e-132 oppC P Binding-protein-dependent transport system inner membrane component
DOKAKFNJ_00818 2.6e-172 oppB P ABC transporter permease
DOKAKFNJ_00819 1.5e-170 oppF P Belongs to the ABC transporter superfamily
DOKAKFNJ_00820 3.1e-192 oppD P Belongs to the ABC transporter superfamily
DOKAKFNJ_00821 4.9e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
DOKAKFNJ_00822 3.7e-182 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
DOKAKFNJ_00823 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
DOKAKFNJ_00824 7.6e-305 yloV S DAK2 domain fusion protein YloV
DOKAKFNJ_00825 1.5e-56 asp S Asp23 family, cell envelope-related function
DOKAKFNJ_00826 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
DOKAKFNJ_00827 1.4e-30
DOKAKFNJ_00828 4.1e-124 thiN 2.7.6.2 H thiamine pyrophosphokinase
DOKAKFNJ_00829 2.9e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
DOKAKFNJ_00830 4.5e-163 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
DOKAKFNJ_00831 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
DOKAKFNJ_00832 6.6e-139 stp 3.1.3.16 T phosphatase
DOKAKFNJ_00833 1.6e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
DOKAKFNJ_00834 1.6e-171 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
DOKAKFNJ_00835 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
DOKAKFNJ_00836 1.1e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
DOKAKFNJ_00837 2.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
DOKAKFNJ_00838 1.1e-77 6.3.3.2 S ASCH
DOKAKFNJ_00839 8.8e-293 recN L May be involved in recombinational repair of damaged DNA
DOKAKFNJ_00840 2.2e-148 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
DOKAKFNJ_00841 7.8e-152 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
DOKAKFNJ_00842 1.1e-34 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DOKAKFNJ_00843 7.6e-186 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
DOKAKFNJ_00844 2.2e-143 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
DOKAKFNJ_00845 2.1e-64 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
DOKAKFNJ_00846 3.4e-71 yqhY S Asp23 family, cell envelope-related function
DOKAKFNJ_00847 4.9e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DOKAKFNJ_00848 1e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
DOKAKFNJ_00849 7.8e-48 rpmA J Belongs to the bacterial ribosomal protein bL27 family
DOKAKFNJ_00850 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
DOKAKFNJ_00851 3.7e-151 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
DOKAKFNJ_00852 7.8e-255 S Uncharacterized protein conserved in bacteria (DUF2325)
DOKAKFNJ_00853 3.3e-303 L Transposase
DOKAKFNJ_00856 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
DOKAKFNJ_00857 2.7e-300 S Predicted membrane protein (DUF2207)
DOKAKFNJ_00858 1.3e-157 cinI S Serine hydrolase (FSH1)
DOKAKFNJ_00859 1.7e-205 M Glycosyl hydrolases family 25
DOKAKFNJ_00861 2.9e-178 I Carboxylesterase family
DOKAKFNJ_00862 1.5e-64 arsC 1.20.4.1 P Belongs to the ArsC family
DOKAKFNJ_00863 4.1e-276 V ABC-type multidrug transport system, ATPase and permease components
DOKAKFNJ_00864 2e-291 V ABC-type multidrug transport system, ATPase and permease components
DOKAKFNJ_00865 4e-113 S haloacid dehalogenase-like hydrolase
DOKAKFNJ_00866 2.6e-52
DOKAKFNJ_00867 1.9e-37
DOKAKFNJ_00868 2.3e-65 S Alpha beta hydrolase
DOKAKFNJ_00869 1.1e-36 S Alpha beta hydrolase
DOKAKFNJ_00870 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
DOKAKFNJ_00871 2.8e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
DOKAKFNJ_00872 7.1e-46
DOKAKFNJ_00873 4e-148 glcU U sugar transport
DOKAKFNJ_00874 2.1e-248 lctP C L-lactate permease
DOKAKFNJ_00875 2.3e-121 V Abi-like protein
DOKAKFNJ_00876 4e-137 K Helix-turn-helix XRE-family like proteins
DOKAKFNJ_00877 2.3e-18
DOKAKFNJ_00878 9.6e-152 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
DOKAKFNJ_00879 1e-292 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
DOKAKFNJ_00880 7e-144 ptp2 3.1.3.48 T Tyrosine phosphatase family
DOKAKFNJ_00881 3.1e-178 yvdE K helix_turn _helix lactose operon repressor
DOKAKFNJ_00882 9.1e-204 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DOKAKFNJ_00883 3.4e-76 S PAS domain
DOKAKFNJ_00884 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
DOKAKFNJ_00885 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
DOKAKFNJ_00886 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
DOKAKFNJ_00887 1.4e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
DOKAKFNJ_00888 3e-209 msmX P Belongs to the ABC transporter superfamily
DOKAKFNJ_00889 2.3e-213 malE G Bacterial extracellular solute-binding protein
DOKAKFNJ_00890 1.1e-250 malF P Binding-protein-dependent transport system inner membrane component
DOKAKFNJ_00891 3.3e-147 malG P ABC transporter permease
DOKAKFNJ_00892 1.5e-59 K Helix-turn-helix XRE-family like proteins
DOKAKFNJ_00895 1.6e-28
DOKAKFNJ_00896 6.7e-09
DOKAKFNJ_00898 6.7e-88 ymdB S Macro domain protein
DOKAKFNJ_00899 4.3e-212 mdtG EGP Major facilitator Superfamily
DOKAKFNJ_00900 7.4e-175
DOKAKFNJ_00901 2.8e-47 lysM M LysM domain
DOKAKFNJ_00902 0.0 pepN 3.4.11.2 E aminopeptidase
DOKAKFNJ_00903 3.3e-81 yveB 2.7.4.29 I PAP2 superfamily
DOKAKFNJ_00904 3.2e-26 xerC L Phage integrase, N-terminal SAM-like domain
DOKAKFNJ_00905 6.5e-146 pstS P Phosphate
DOKAKFNJ_00906 2.8e-152 pstC P probably responsible for the translocation of the substrate across the membrane
DOKAKFNJ_00907 1.9e-150 pstA P Phosphate transport system permease protein PstA
DOKAKFNJ_00908 4.3e-138 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
DOKAKFNJ_00909 1.2e-104 phoU P Plays a role in the regulation of phosphate uptake
DOKAKFNJ_00910 1.5e-118 T Transcriptional regulatory protein, C terminal
DOKAKFNJ_00911 1.7e-280 phoR 2.7.13.3 T Histidine kinase
DOKAKFNJ_00912 8.9e-192 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DOKAKFNJ_00913 3.2e-74 nrdI F NrdI Flavodoxin like
DOKAKFNJ_00914 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DOKAKFNJ_00915 3.7e-260 L Transposase
DOKAKFNJ_00916 9.2e-35 L Transposase DDE domain
DOKAKFNJ_00917 5.3e-249 dtpT U amino acid peptide transporter
DOKAKFNJ_00918 3.7e-111 K WHG domain
DOKAKFNJ_00919 6.4e-96 nqr 1.5.1.36 S NADPH-dependent FMN reductase
DOKAKFNJ_00920 2e-97 azr 1.5.1.36 S NADPH-dependent FMN reductase
DOKAKFNJ_00921 6e-151 3.1.3.48 T Tyrosine phosphatase family
DOKAKFNJ_00922 2.5e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
DOKAKFNJ_00923 3e-53 cvpA S Colicin V production protein
DOKAKFNJ_00924 1.2e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
DOKAKFNJ_00925 5e-148 noc K Belongs to the ParB family
DOKAKFNJ_00926 3.4e-138 soj D Sporulation initiation inhibitor
DOKAKFNJ_00927 1.5e-153 spo0J K Belongs to the ParB family
DOKAKFNJ_00928 2.8e-44 yyzM S Bacterial protein of unknown function (DUF951)
DOKAKFNJ_00929 3.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
DOKAKFNJ_00930 3.8e-137 XK27_01040 S Protein of unknown function (DUF1129)
DOKAKFNJ_00931 1.2e-145 V ABC transporter, ATP-binding protein
DOKAKFNJ_00932 4.2e-144 V ABC transporter, ATP-binding protein
DOKAKFNJ_00933 0.0 V ABC transporter
DOKAKFNJ_00934 9.6e-121 K response regulator
DOKAKFNJ_00935 6.6e-207 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
DOKAKFNJ_00936 5.5e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
DOKAKFNJ_00937 8e-145 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
DOKAKFNJ_00938 1.4e-53 S Enterocin A Immunity
DOKAKFNJ_00939 2.5e-33
DOKAKFNJ_00940 2.1e-25
DOKAKFNJ_00941 1e-24
DOKAKFNJ_00942 3e-270 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
DOKAKFNJ_00943 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
DOKAKFNJ_00944 2.1e-255 S Archaea bacterial proteins of unknown function
DOKAKFNJ_00945 1.2e-16
DOKAKFNJ_00946 4.4e-138 2.7.13.3 T GHKL domain
DOKAKFNJ_00947 1.2e-127 K LytTr DNA-binding domain
DOKAKFNJ_00948 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
DOKAKFNJ_00949 1.4e-107 M Transport protein ComB
DOKAKFNJ_00950 2.2e-129 blpT
DOKAKFNJ_00954 3e-21
DOKAKFNJ_00955 3.7e-83
DOKAKFNJ_00956 8.2e-31 yozG K Transcriptional regulator
DOKAKFNJ_00957 2e-23
DOKAKFNJ_00958 1.7e-67
DOKAKFNJ_00959 1.1e-164 natA S ABC transporter, ATP-binding protein
DOKAKFNJ_00960 1.8e-218 natB CP ABC-2 family transporter protein
DOKAKFNJ_00961 2.6e-135 fruR K DeoR C terminal sensor domain
DOKAKFNJ_00962 2.2e-168 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
DOKAKFNJ_00963 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
DOKAKFNJ_00964 5.4e-41 K helix_turn_helix, Arsenical Resistance Operon Repressor
DOKAKFNJ_00965 1.4e-148 psaA P Belongs to the bacterial solute-binding protein 9 family
DOKAKFNJ_00966 1.6e-117 fhuC P ABC transporter
DOKAKFNJ_00967 5e-129 znuB U ABC 3 transport family
DOKAKFNJ_00969 1.7e-28 mloB K Putative ATP-dependent DNA helicase recG C-terminal
DOKAKFNJ_00970 3.5e-248 lctP C L-lactate permease
DOKAKFNJ_00971 5.8e-85 2.3.1.128 K Acetyltransferase (GNAT) domain
DOKAKFNJ_00972 7.8e-157 S reductase
DOKAKFNJ_00973 2e-29
DOKAKFNJ_00974 2.9e-287 K Putative DNA-binding domain
DOKAKFNJ_00975 2.9e-238 pyrP F Permease
DOKAKFNJ_00976 4.7e-91 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
DOKAKFNJ_00977 1.7e-260 emrY EGP Major facilitator Superfamily
DOKAKFNJ_00978 1.1e-217 mdtG EGP Major facilitator Superfamily
DOKAKFNJ_00979 6.9e-136
DOKAKFNJ_00980 1.9e-43
DOKAKFNJ_00981 1.7e-209 pepA E M42 glutamyl aminopeptidase
DOKAKFNJ_00982 1.1e-310 ybiT S ABC transporter, ATP-binding protein
DOKAKFNJ_00983 5.9e-174 S Aldo keto reductase
DOKAKFNJ_00984 9.3e-86
DOKAKFNJ_00985 1.2e-282 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
DOKAKFNJ_00986 7.7e-182 S Alpha/beta hydrolase of unknown function (DUF915)
DOKAKFNJ_00987 3e-147 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
DOKAKFNJ_00988 4.4e-140 ypuA S Protein of unknown function (DUF1002)
DOKAKFNJ_00989 3.7e-156 epsV 2.7.8.12 S glycosyl transferase family 2
DOKAKFNJ_00990 7.3e-126 S Alpha/beta hydrolase family
DOKAKFNJ_00991 1.4e-94
DOKAKFNJ_00992 3e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
DOKAKFNJ_00993 9e-98
DOKAKFNJ_00994 4.9e-108 K LysR substrate binding domain
DOKAKFNJ_00995 1e-20
DOKAKFNJ_00996 2.3e-215 S Sterol carrier protein domain
DOKAKFNJ_00997 9.2e-95 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
DOKAKFNJ_00998 2e-105 argF 2.1.3.3, 2.7.2.2 E Belongs to the carbamate kinase family
DOKAKFNJ_00999 4.3e-66 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
DOKAKFNJ_01000 8.8e-234 arcA 3.5.3.6 E Arginine
DOKAKFNJ_01001 1.2e-136 lysR5 K LysR substrate binding domain
DOKAKFNJ_01002 0.0 mgtA 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
DOKAKFNJ_01003 1e-48 S Metal binding domain of Ada
DOKAKFNJ_01004 5.8e-73 S domain protein
DOKAKFNJ_01006 4.9e-251 ade 3.5.4.2 F Adenine deaminase C-terminal domain
DOKAKFNJ_01007 3e-145 potD2 P ABC transporter
DOKAKFNJ_01008 3.5e-84 potA11 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
DOKAKFNJ_01009 4e-42 potA11 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
DOKAKFNJ_01010 2.2e-108 potC3 E Binding-protein-dependent transport system inner membrane component
DOKAKFNJ_01011 1.2e-10
DOKAKFNJ_01012 2.8e-65 K LytTr DNA-binding domain
DOKAKFNJ_01013 1.2e-49 S Protein of unknown function (DUF3021)
DOKAKFNJ_01014 6.3e-105 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
DOKAKFNJ_01015 1.9e-118 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
DOKAKFNJ_01016 6e-132 S membrane transporter protein
DOKAKFNJ_01017 3.7e-125 gpmB G Belongs to the phosphoglycerate mutase family
DOKAKFNJ_01018 7.3e-161 czcD P cation diffusion facilitator family transporter
DOKAKFNJ_01019 1.4e-23
DOKAKFNJ_01020 2.6e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DOKAKFNJ_01021 5.4e-183 S AAA domain
DOKAKFNJ_01022 3.3e-44
DOKAKFNJ_01023 4.3e-266 pepC 3.4.22.40 E Peptidase C1-like family
DOKAKFNJ_01024 2.7e-51
DOKAKFNJ_01025 8.9e-133 L Phage integrase family
DOKAKFNJ_01026 5.1e-66 rpsI J Belongs to the universal ribosomal protein uS9 family
DOKAKFNJ_01027 5.9e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
DOKAKFNJ_01028 8.4e-145 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
DOKAKFNJ_01029 7.2e-136 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DOKAKFNJ_01030 4.6e-157 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DOKAKFNJ_01031 3.7e-154 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
DOKAKFNJ_01032 1.4e-60 rplQ J Ribosomal protein L17
DOKAKFNJ_01033 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DOKAKFNJ_01034 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
DOKAKFNJ_01035 3.6e-55 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
DOKAKFNJ_01036 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
DOKAKFNJ_01037 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
DOKAKFNJ_01038 3.5e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
DOKAKFNJ_01039 1.1e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
DOKAKFNJ_01040 2.6e-71 rplO J Binds to the 23S rRNA
DOKAKFNJ_01041 2.3e-24 rpmD J Ribosomal protein L30
DOKAKFNJ_01042 4.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
DOKAKFNJ_01043 1.1e-54 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
DOKAKFNJ_01044 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
DOKAKFNJ_01045 3.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
DOKAKFNJ_01046 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DOKAKFNJ_01047 5.5e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
DOKAKFNJ_01048 3.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
DOKAKFNJ_01049 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
DOKAKFNJ_01050 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
DOKAKFNJ_01051 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
DOKAKFNJ_01052 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
DOKAKFNJ_01053 2.7e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
DOKAKFNJ_01054 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
DOKAKFNJ_01055 1.1e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
DOKAKFNJ_01056 7.3e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
DOKAKFNJ_01057 3.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
DOKAKFNJ_01058 2.1e-106 rplD J Forms part of the polypeptide exit tunnel
DOKAKFNJ_01059 9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
DOKAKFNJ_01060 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
DOKAKFNJ_01061 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
DOKAKFNJ_01062 2.7e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
DOKAKFNJ_01063 7.8e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
DOKAKFNJ_01064 5.2e-119 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
DOKAKFNJ_01065 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DOKAKFNJ_01066 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
DOKAKFNJ_01067 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
DOKAKFNJ_01068 1.3e-81 yebR 1.8.4.14 T GAF domain-containing protein
DOKAKFNJ_01070 1.6e-08
DOKAKFNJ_01071 1.6e-08
DOKAKFNJ_01072 1.6e-08
DOKAKFNJ_01073 1.4e-83 K FR47-like protein
DOKAKFNJ_01074 0.0 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
DOKAKFNJ_01075 2e-37 scrR K Periplasmic binding protein domain
DOKAKFNJ_01076 2.8e-33 scrR K Periplasmic binding protein domain
DOKAKFNJ_01077 6e-38 L Transposase and inactivated derivatives, IS30 family
DOKAKFNJ_01078 1e-95
DOKAKFNJ_01079 7.8e-78 2.5.1.74 H UbiA prenyltransferase family
DOKAKFNJ_01081 8.7e-117 3.2.1.18 GH33 M Rib/alpha-like repeat
DOKAKFNJ_01082 4.9e-99 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
DOKAKFNJ_01084 7.8e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
DOKAKFNJ_01085 2.4e-43 K Helix-turn-helix
DOKAKFNJ_01086 3.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
DOKAKFNJ_01087 1.4e-226 pbuX F xanthine permease
DOKAKFNJ_01088 2.5e-152 msmR K AraC-like ligand binding domain
DOKAKFNJ_01089 4.4e-285 pipD E Dipeptidase
DOKAKFNJ_01090 1.3e-47 adk 2.7.4.3 F AAA domain
DOKAKFNJ_01091 2.1e-80 K acetyltransferase
DOKAKFNJ_01092 1.4e-245 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
DOKAKFNJ_01093 2.7e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
DOKAKFNJ_01094 1.8e-47 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
DOKAKFNJ_01095 4.5e-68 S Domain of unknown function (DUF1934)
DOKAKFNJ_01097 2.1e-185 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
DOKAKFNJ_01098 1.7e-129 manY G PTS system
DOKAKFNJ_01099 1e-173 manN G system, mannose fructose sorbose family IID component
DOKAKFNJ_01100 1.1e-62 manO S Domain of unknown function (DUF956)
DOKAKFNJ_01101 3.3e-158 K Transcriptional regulator
DOKAKFNJ_01102 1.3e-85 maa S transferase hexapeptide repeat
DOKAKFNJ_01103 7.5e-242 cycA E Amino acid permease
DOKAKFNJ_01104 3.2e-30 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
DOKAKFNJ_01105 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
DOKAKFNJ_01106 3.9e-93 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
DOKAKFNJ_01107 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
DOKAKFNJ_01108 0.0 mtlR K Mga helix-turn-helix domain
DOKAKFNJ_01109 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
DOKAKFNJ_01110 2.1e-79 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DOKAKFNJ_01111 1e-218 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
DOKAKFNJ_01112 3.2e-28 4.1.1.44 S Carboxymuconolactone decarboxylase family
DOKAKFNJ_01113 1.4e-78 4.1.1.44 S Carboxymuconolactone decarboxylase family
DOKAKFNJ_01114 2.1e-32
DOKAKFNJ_01115 3.7e-59 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
DOKAKFNJ_01116 2.3e-156 K Helix-turn-helix XRE-family like proteins
DOKAKFNJ_01117 3.9e-298 V ABC transporter transmembrane region
DOKAKFNJ_01118 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
DOKAKFNJ_01119 0.0 S TerB-C domain
DOKAKFNJ_01120 3.5e-244 P P-loop Domain of unknown function (DUF2791)
DOKAKFNJ_01121 0.0 lhr L DEAD DEAH box helicase
DOKAKFNJ_01122 1.4e-60
DOKAKFNJ_01123 1.6e-227 amtB P ammonium transporter
DOKAKFNJ_01124 4.4e-135 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
DOKAKFNJ_01126 6.2e-59 psiE S Phosphate-starvation-inducible E
DOKAKFNJ_01127 1.9e-112 yncA 2.3.1.79 S Maltose acetyltransferase
DOKAKFNJ_01128 2.9e-69 S Iron-sulphur cluster biosynthesis
DOKAKFNJ_01130 5.1e-30
DOKAKFNJ_01131 2.3e-172 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
DOKAKFNJ_01132 6.2e-12
DOKAKFNJ_01133 1.8e-125 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DOKAKFNJ_01134 2.8e-86 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DOKAKFNJ_01135 1.3e-141 yfeO P Voltage gated chloride channel
DOKAKFNJ_01136 1.4e-184 5.3.3.2 C FMN-dependent dehydrogenase
DOKAKFNJ_01137 1.4e-51
DOKAKFNJ_01138 2.1e-42
DOKAKFNJ_01139 6.4e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
DOKAKFNJ_01140 9.5e-297 ybeC E amino acid
DOKAKFNJ_01141 2.6e-157 S Sucrose-6F-phosphate phosphohydrolase
DOKAKFNJ_01142 3.5e-99 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
DOKAKFNJ_01143 1.4e-203 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
DOKAKFNJ_01144 2.5e-39 rpmE2 J Ribosomal protein L31
DOKAKFNJ_01145 1.3e-262 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
DOKAKFNJ_01146 4.8e-250 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
DOKAKFNJ_01147 1.7e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
DOKAKFNJ_01148 1e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
DOKAKFNJ_01149 3.4e-129 S (CBS) domain
DOKAKFNJ_01150 1.5e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
DOKAKFNJ_01151 5.1e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
DOKAKFNJ_01152 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
DOKAKFNJ_01153 1.6e-33 yabO J S4 domain protein
DOKAKFNJ_01154 6.8e-60 divIC D Septum formation initiator
DOKAKFNJ_01155 1.8e-62 yabR J S1 RNA binding domain
DOKAKFNJ_01156 1.5e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
DOKAKFNJ_01157 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
DOKAKFNJ_01158 9.7e-166 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
DOKAKFNJ_01159 2e-194 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
DOKAKFNJ_01160 1.7e-298 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
DOKAKFNJ_01161 2.7e-99 K Helix-turn-helix domain, rpiR family
DOKAKFNJ_01162 4.9e-82 rarA L MgsA AAA+ ATPase C terminal
DOKAKFNJ_01163 1.2e-225 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
DOKAKFNJ_01165 1.8e-104 3.2.2.20 K acetyltransferase
DOKAKFNJ_01166 2.3e-93 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
DOKAKFNJ_01167 3e-24
DOKAKFNJ_01168 5.4e-13
DOKAKFNJ_01169 4.1e-217 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
DOKAKFNJ_01170 0.0 G Belongs to the glycosyl hydrolase 31 family
DOKAKFNJ_01171 8.7e-145 I alpha/beta hydrolase fold
DOKAKFNJ_01172 4.9e-129 yibF S overlaps another CDS with the same product name
DOKAKFNJ_01173 2.2e-202 yibE S overlaps another CDS with the same product name
DOKAKFNJ_01174 1.4e-112
DOKAKFNJ_01175 1.2e-205 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
DOKAKFNJ_01176 6.4e-224 S Cysteine-rich secretory protein family
DOKAKFNJ_01177 2.6e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
DOKAKFNJ_01178 1.3e-258 glnPH2 P ABC transporter permease
DOKAKFNJ_01179 2.8e-135
DOKAKFNJ_01180 8.4e-125 luxT K Bacterial regulatory proteins, tetR family
DOKAKFNJ_01181 3.3e-183 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
DOKAKFNJ_01182 5.6e-36
DOKAKFNJ_01183 1.3e-30
DOKAKFNJ_01184 8e-69 T Toxin-antitoxin system, toxin component, MazF family
DOKAKFNJ_01185 2.2e-102 L Integrase
DOKAKFNJ_01186 8.2e-154 L Transposase
DOKAKFNJ_01187 4e-56 L Transposase
DOKAKFNJ_01188 5.4e-106 L PFAM Integrase catalytic
DOKAKFNJ_01189 8.6e-119 clcA P chloride
DOKAKFNJ_01190 1.6e-60 clcA P chloride
DOKAKFNJ_01191 4.7e-26 K FCD
DOKAKFNJ_01192 3.4e-15 K FCD
DOKAKFNJ_01193 1.5e-102 GM NmrA-like family
DOKAKFNJ_01194 1.9e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
DOKAKFNJ_01195 3.5e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
DOKAKFNJ_01196 2.4e-167 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
DOKAKFNJ_01197 4.2e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
DOKAKFNJ_01198 3.6e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
DOKAKFNJ_01199 4e-245 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
DOKAKFNJ_01200 2.4e-211 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
DOKAKFNJ_01201 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
DOKAKFNJ_01202 9.9e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
DOKAKFNJ_01203 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
DOKAKFNJ_01204 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
DOKAKFNJ_01205 4.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
DOKAKFNJ_01206 4.4e-135 recO L Involved in DNA repair and RecF pathway recombination
DOKAKFNJ_01207 2.1e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
DOKAKFNJ_01208 2.2e-93 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
DOKAKFNJ_01209 2.5e-175 phoH T phosphate starvation-inducible protein PhoH
DOKAKFNJ_01210 3.5e-71 yqeY S YqeY-like protein
DOKAKFNJ_01211 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
DOKAKFNJ_01212 1.2e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
DOKAKFNJ_01213 1.5e-18 S CRISPR-associated protein (Cas_Csn2)
DOKAKFNJ_01214 1.3e-172 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
DOKAKFNJ_01215 1.1e-147 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
DOKAKFNJ_01216 4.5e-39 veg S Biofilm formation stimulator VEG
DOKAKFNJ_01217 3e-151 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
DOKAKFNJ_01218 1e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
DOKAKFNJ_01219 1e-147 tatD L hydrolase, TatD family
DOKAKFNJ_01220 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
DOKAKFNJ_01221 1e-307 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
DOKAKFNJ_01222 1.5e-132 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
DOKAKFNJ_01223 2e-103 S TPM domain
DOKAKFNJ_01224 1.8e-89 comEB 3.5.4.12 F MafB19-like deaminase
DOKAKFNJ_01225 3.7e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
DOKAKFNJ_01226 1.2e-111 E Belongs to the SOS response-associated peptidase family
DOKAKFNJ_01228 7.9e-112
DOKAKFNJ_01229 7.5e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
DOKAKFNJ_01230 2.9e-67 hsp O Belongs to the small heat shock protein (HSP20) family
DOKAKFNJ_01231 5.2e-256 pepC 3.4.22.40 E aminopeptidase
DOKAKFNJ_01232 1.9e-175 oppF P Belongs to the ABC transporter superfamily
DOKAKFNJ_01233 2.3e-198 oppD P Belongs to the ABC transporter superfamily
DOKAKFNJ_01234 8.9e-187 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
DOKAKFNJ_01235 1.1e-146 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
DOKAKFNJ_01236 8.3e-210 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
DOKAKFNJ_01237 3e-270 L Transposase DDE domain
DOKAKFNJ_01238 1.6e-310 oppA E ABC transporter, substratebinding protein
DOKAKFNJ_01239 5e-301 oppA E ABC transporter, substratebinding protein
DOKAKFNJ_01240 1.3e-122 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
DOKAKFNJ_01241 4.6e-257 pepC 3.4.22.40 E aminopeptidase
DOKAKFNJ_01243 4.5e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
DOKAKFNJ_01244 8.4e-265 S Fibronectin type III domain
DOKAKFNJ_01245 7e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
DOKAKFNJ_01246 3.2e-181 ccpA K catabolite control protein A
DOKAKFNJ_01247 2.3e-267 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
DOKAKFNJ_01248 4.3e-55
DOKAKFNJ_01249 9.8e-274 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
DOKAKFNJ_01250 1.7e-105 yutD S Protein of unknown function (DUF1027)
DOKAKFNJ_01251 6.9e-144 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
DOKAKFNJ_01252 3.7e-100 S Protein of unknown function (DUF1461)
DOKAKFNJ_01253 2.6e-115 dedA S SNARE-like domain protein
DOKAKFNJ_01254 8e-185 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
DOKAKFNJ_01256 5.4e-215 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
DOKAKFNJ_01257 2.5e-179 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
DOKAKFNJ_01258 8.8e-177 yjbQ P TrkA C-terminal domain protein
DOKAKFNJ_01259 1.9e-113 yjbQ P TrkA C-terminal domain protein
DOKAKFNJ_01260 1.7e-106 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
DOKAKFNJ_01261 2.1e-161 S Oxidoreductase family, NAD-binding Rossmann fold
DOKAKFNJ_01262 2.1e-130
DOKAKFNJ_01263 2.1e-116
DOKAKFNJ_01264 5e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
DOKAKFNJ_01265 1.4e-98 G Aldose 1-epimerase
DOKAKFNJ_01266 5.2e-201 brpA K Cell envelope-like function transcriptional attenuator common domain protein
DOKAKFNJ_01267 1.6e-111 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
DOKAKFNJ_01268 0.0 XK27_08315 M Sulfatase
DOKAKFNJ_01269 4e-36 S Cytochrome B5
DOKAKFNJ_01270 1.7e-167 arbZ I Phosphate acyltransferases
DOKAKFNJ_01271 8.7e-181 arbY M Glycosyl transferase family 8
DOKAKFNJ_01272 1.5e-143 arbY M Glycosyl transferase family 8
DOKAKFNJ_01273 7.1e-124 S SLAP domain
DOKAKFNJ_01275 5.3e-41
DOKAKFNJ_01276 1.2e-77 K DNA-templated transcription, initiation
DOKAKFNJ_01277 1.1e-25
DOKAKFNJ_01278 4.3e-145 3.6.4.12 S PD-(D/E)XK nuclease family transposase
DOKAKFNJ_01279 1.3e-36
DOKAKFNJ_01280 2.8e-09 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
DOKAKFNJ_01281 1.3e-146 ykuT M mechanosensitive ion channel
DOKAKFNJ_01282 3.1e-100 V ATPases associated with a variety of cellular activities
DOKAKFNJ_01283 1.4e-133
DOKAKFNJ_01284 3.4e-99
DOKAKFNJ_01285 8.7e-19 spaC2 V Lanthionine synthetase C-like protein
DOKAKFNJ_01287 1.5e-15 2.1.1.14 E methionine synthase, vitamin-B12 independent
DOKAKFNJ_01288 1.2e-11
DOKAKFNJ_01289 2e-25 K Helix-turn-helix XRE-family like proteins
DOKAKFNJ_01292 1.4e-78 2.7.13.3 T GHKL domain
DOKAKFNJ_01293 2.9e-79 K LytTr DNA-binding domain
DOKAKFNJ_01294 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
DOKAKFNJ_01295 1.1e-16 2.4.1.33 V HlyD family secretion protein
DOKAKFNJ_01296 7.1e-19 2.4.1.33 V HlyD family secretion protein
DOKAKFNJ_01300 3e-134 S CAAX amino terminal protease
DOKAKFNJ_01301 7.4e-40 S Enterocin A Immunity
DOKAKFNJ_01302 0.0 pepF E oligoendopeptidase F
DOKAKFNJ_01303 2.2e-208 brpA K Cell envelope-like function transcriptional attenuator common domain protein
DOKAKFNJ_01304 6.5e-125 S Protein of unknown function (DUF554)
DOKAKFNJ_01305 8.2e-61
DOKAKFNJ_01306 5.6e-19
DOKAKFNJ_01307 1.2e-97 rimL J Acetyltransferase (GNAT) domain
DOKAKFNJ_01308 8.3e-58
DOKAKFNJ_01309 8.9e-292 S ABC transporter
DOKAKFNJ_01310 2.4e-136 thrE S Putative threonine/serine exporter
DOKAKFNJ_01311 1.1e-83 S Threonine/Serine exporter, ThrE
DOKAKFNJ_01312 9.1e-112 yvpB S Peptidase_C39 like family
DOKAKFNJ_01313 2.5e-68
DOKAKFNJ_01314 9.9e-177 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
DOKAKFNJ_01315 5.5e-77 nrdI F NrdI Flavodoxin like
DOKAKFNJ_01316 2.3e-223 tnpB L Putative transposase DNA-binding domain
DOKAKFNJ_01317 3.3e-112
DOKAKFNJ_01318 6.5e-279 S O-antigen ligase like membrane protein
DOKAKFNJ_01319 3.9e-42
DOKAKFNJ_01320 7.7e-89 gmk2 2.7.4.8 F Guanylate kinase homologues.
DOKAKFNJ_01321 2e-89 M NlpC/P60 family
DOKAKFNJ_01322 1.4e-136 M NlpC P60 family protein
DOKAKFNJ_01323 2.6e-118 M NlpC/P60 family
DOKAKFNJ_01324 3.5e-41
DOKAKFNJ_01325 3.5e-175 S Cysteine-rich secretory protein family
DOKAKFNJ_01326 1.5e-215 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
DOKAKFNJ_01328 1.7e-29 S Predicted membrane protein (DUF2335)
DOKAKFNJ_01330 5.1e-71 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
DOKAKFNJ_01331 1.3e-125 gntR1 K UTRA
DOKAKFNJ_01332 2.5e-179
DOKAKFNJ_01333 1.9e-300 oppA2 E ABC transporter, substratebinding protein
DOKAKFNJ_01336 1.1e-240 npr 1.11.1.1 C NADH oxidase
DOKAKFNJ_01337 7.7e-12
DOKAKFNJ_01338 3.7e-22 3.6.4.12 S transposase or invertase
DOKAKFNJ_01339 6.7e-228 slpX S SLAP domain
DOKAKFNJ_01340 4.4e-144 K SIS domain
DOKAKFNJ_01341 8.1e-120 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
DOKAKFNJ_01342 2.7e-185 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
DOKAKFNJ_01343 6.5e-210 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
DOKAKFNJ_01345 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
DOKAKFNJ_01347 1.2e-115 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
DOKAKFNJ_01348 6.6e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
DOKAKFNJ_01349 2.6e-89 G Histidine phosphatase superfamily (branch 1)
DOKAKFNJ_01350 1.2e-105 G Phosphoglycerate mutase family
DOKAKFNJ_01351 4.7e-159 D nuclear chromosome segregation
DOKAKFNJ_01352 5.8e-78 M LysM domain protein
DOKAKFNJ_01353 2.3e-107 psaA P Belongs to the bacterial solute-binding protein 9 family
DOKAKFNJ_01356 8.7e-218 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
DOKAKFNJ_01357 2.4e-246 qacA EGP Major facilitator Superfamily
DOKAKFNJ_01358 0.0 sacX 2.7.1.208, 2.7.1.211 G phosphotransferase system
DOKAKFNJ_01359 3.1e-151 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
DOKAKFNJ_01360 1.4e-183 yfeW 3.4.16.4 V Beta-lactamase
DOKAKFNJ_01361 3.1e-187 S Bacterial protein of unknown function (DUF871)
DOKAKFNJ_01362 4.5e-144 ybbH_2 K rpiR family
DOKAKFNJ_01363 7e-23 cydA 1.10.3.14 C ubiquinol oxidase
DOKAKFNJ_01364 7.4e-229 steT_1 E amino acid
DOKAKFNJ_01365 2.2e-139 puuD S peptidase C26
DOKAKFNJ_01367 1.5e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
DOKAKFNJ_01368 5.3e-136 glvR K Helix-turn-helix domain, rpiR family
DOKAKFNJ_01369 2.7e-268 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
DOKAKFNJ_01370 1.5e-152
DOKAKFNJ_01371 2.4e-09 lacS G Transporter
DOKAKFNJ_01372 3.2e-165 lacR K Transcriptional regulator
DOKAKFNJ_01373 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
DOKAKFNJ_01374 7e-146 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
DOKAKFNJ_01375 4.5e-188 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
DOKAKFNJ_01376 6.4e-162 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
DOKAKFNJ_01377 2e-106 K Transcriptional regulator, AbiEi antitoxin
DOKAKFNJ_01378 1.2e-188 K Periplasmic binding protein-like domain
DOKAKFNJ_01379 5.9e-45
DOKAKFNJ_01380 3.7e-58 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
DOKAKFNJ_01382 2.1e-45 S PFAM Archaeal ATPase
DOKAKFNJ_01383 7.3e-74
DOKAKFNJ_01384 0.0 kup P Transport of potassium into the cell
DOKAKFNJ_01385 0.0 pepO 3.4.24.71 O Peptidase family M13
DOKAKFNJ_01386 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
DOKAKFNJ_01387 3.5e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
DOKAKFNJ_01388 8.4e-146 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
DOKAKFNJ_01389 2.1e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
DOKAKFNJ_01390 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
DOKAKFNJ_01391 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
DOKAKFNJ_01392 1.6e-31
DOKAKFNJ_01393 3.1e-275 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
DOKAKFNJ_01394 3.9e-287 clcA P chloride
DOKAKFNJ_01395 3.6e-33 E Zn peptidase
DOKAKFNJ_01396 3.7e-58 ps115 K Helix-turn-helix XRE-family like proteins
DOKAKFNJ_01397 5.7e-44
DOKAKFNJ_01398 1.1e-106 S Bacteriocin helveticin-J
DOKAKFNJ_01399 1.3e-117 S SLAP domain
DOKAKFNJ_01400 3.5e-136 S SLAP domain
DOKAKFNJ_01401 2.8e-210
DOKAKFNJ_01402 1.2e-18
DOKAKFNJ_01403 7e-248 EGP Sugar (and other) transporter
DOKAKFNJ_01404 1.2e-105
DOKAKFNJ_01405 8.2e-114 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
DOKAKFNJ_01406 0.0 copA 3.6.3.54 P P-type ATPase
DOKAKFNJ_01407 1.8e-44 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
DOKAKFNJ_01408 9.2e-57 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
DOKAKFNJ_01409 8.1e-37
DOKAKFNJ_01412 1.8e-31
DOKAKFNJ_01413 1.1e-139
DOKAKFNJ_01414 3.7e-261 V ABC transporter transmembrane region
DOKAKFNJ_01415 1.4e-37 S Putative adhesin
DOKAKFNJ_01416 1.8e-26 L Transposase
DOKAKFNJ_01417 8.8e-29
DOKAKFNJ_01420 4.9e-111 K Helix-turn-helix XRE-family like proteins
DOKAKFNJ_01421 2.5e-75 K Helix-turn-helix domain
DOKAKFNJ_01422 1.9e-25 S CAAX protease self-immunity
DOKAKFNJ_01423 1.4e-22 S CAAX protease self-immunity
DOKAKFNJ_01424 7.6e-26 WQ51_00220 K Helix-turn-helix XRE-family like proteins
DOKAKFNJ_01426 1.6e-96 ybaT E Amino acid permease
DOKAKFNJ_01427 6.5e-07 S LPXTG cell wall anchor motif
DOKAKFNJ_01428 2.6e-146 S Putative ABC-transporter type IV
DOKAKFNJ_01429 9.6e-28 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
DOKAKFNJ_01430 5.6e-294 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
DOKAKFNJ_01431 5.8e-116 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
DOKAKFNJ_01432 1.2e-210 oppA E ABC transporter substrate-binding protein
DOKAKFNJ_01433 2.7e-109 oppA E ABC transporter substrate-binding protein
DOKAKFNJ_01434 6.4e-177 K AI-2E family transporter
DOKAKFNJ_01435 2.6e-103 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
DOKAKFNJ_01436 4.1e-18
DOKAKFNJ_01437 5.2e-248 G Major Facilitator
DOKAKFNJ_01438 2.4e-136 XK27_08845 S ABC transporter, ATP-binding protein
DOKAKFNJ_01439 5.6e-121 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
DOKAKFNJ_01440 1.7e-174 ABC-SBP S ABC transporter
DOKAKFNJ_01441 5.6e-132 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
DOKAKFNJ_01442 1.6e-48 P CorA-like Mg2+ transporter protein
DOKAKFNJ_01443 2.6e-49 P CorA-like Mg2+ transporter protein
DOKAKFNJ_01444 1.2e-160 yvgN C Aldo keto reductase
DOKAKFNJ_01445 0.0 tetP J elongation factor G
DOKAKFNJ_01446 4e-150 3.1.3.102, 3.1.3.104 S haloacid dehalogenase-like hydrolase
DOKAKFNJ_01447 7.6e-134 EGP Major facilitator Superfamily
DOKAKFNJ_01448 1.4e-192 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
DOKAKFNJ_01451 1.8e-158 xth 3.1.11.2 L exodeoxyribonuclease III
DOKAKFNJ_01452 1.3e-273 E amino acid
DOKAKFNJ_01453 0.0 L Helicase C-terminal domain protein
DOKAKFNJ_01454 4e-204 pbpX1 V Beta-lactamase
DOKAKFNJ_01455 5.1e-226 N Uncharacterized conserved protein (DUF2075)
DOKAKFNJ_01456 1.4e-69 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
DOKAKFNJ_01457 3e-90 S PFAM Archaeal ATPase
DOKAKFNJ_01458 5.1e-91 S PFAM Archaeal ATPase
DOKAKFNJ_01459 7.7e-26
DOKAKFNJ_01460 4.3e-76 menA 2.5.1.74 H UbiA prenyltransferase family
DOKAKFNJ_01461 8.4e-25 G Peptidase_C39 like family
DOKAKFNJ_01462 2.8e-162 M NlpC/P60 family
DOKAKFNJ_01463 6.5e-91 G Peptidase_C39 like family
DOKAKFNJ_01464 1.8e-175 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
DOKAKFNJ_01465 9.6e-78 P Cobalt transport protein
DOKAKFNJ_01466 4.8e-249 cbiO1 S ABC transporter, ATP-binding protein
DOKAKFNJ_01467 3.4e-274 pipD E Dipeptidase
DOKAKFNJ_01468 1.5e-102 devA 3.6.3.25 V ABC transporter, ATP-binding protein
DOKAKFNJ_01469 3.3e-176 hrtB V ABC transporter permease
DOKAKFNJ_01470 2.7e-91 ygfC K Bacterial regulatory proteins, tetR family
DOKAKFNJ_01471 3.5e-111 G phosphoglycerate mutase
DOKAKFNJ_01472 4.6e-140 aroD S Alpha/beta hydrolase family
DOKAKFNJ_01473 2.2e-142 S Belongs to the UPF0246 family
DOKAKFNJ_01474 2.6e-120
DOKAKFNJ_01475 1.9e-157 2.7.7.12 C Domain of unknown function (DUF4931)
DOKAKFNJ_01476 1.8e-171 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
DOKAKFNJ_01477 2.6e-202 cpoA GT4 M Glycosyltransferase, group 1 family protein
DOKAKFNJ_01478 7.9e-224 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
DOKAKFNJ_01482 3.1e-48 S Domain of unknown function (DUF4811)
DOKAKFNJ_01483 1.4e-262 lmrB EGP Major facilitator Superfamily
DOKAKFNJ_01484 4.2e-77 K MerR HTH family regulatory protein
DOKAKFNJ_01485 3.1e-139 S Cysteine-rich secretory protein family
DOKAKFNJ_01486 4.6e-274 ycaM E amino acid
DOKAKFNJ_01487 2.8e-290
DOKAKFNJ_01489 3.3e-189 cggR K Putative sugar-binding domain
DOKAKFNJ_01490 6.5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
DOKAKFNJ_01491 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
DOKAKFNJ_01492 1.7e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
DOKAKFNJ_01493 3e-198 L COG2826 Transposase and inactivated derivatives, IS30 family
DOKAKFNJ_01494 1.2e-94
DOKAKFNJ_01495 3.4e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
DOKAKFNJ_01496 9.7e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
DOKAKFNJ_01497 4.1e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
DOKAKFNJ_01498 7e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
DOKAKFNJ_01499 4e-98 dnaQ 2.7.7.7 L DNA polymerase III
DOKAKFNJ_01500 2e-163 murB 1.3.1.98 M Cell wall formation
DOKAKFNJ_01501 1.8e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
DOKAKFNJ_01502 1.3e-129 potB P ABC transporter permease
DOKAKFNJ_01503 4.8e-127 potC P ABC transporter permease
DOKAKFNJ_01504 7.3e-208 potD P ABC transporter
DOKAKFNJ_01505 6.4e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
DOKAKFNJ_01506 2e-172 ybbR S YbbR-like protein
DOKAKFNJ_01507 3.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
DOKAKFNJ_01508 1.4e-147 S hydrolase
DOKAKFNJ_01509 1.8e-75 K Penicillinase repressor
DOKAKFNJ_01510 1.6e-118
DOKAKFNJ_01511 7.4e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
DOKAKFNJ_01512 3.8e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
DOKAKFNJ_01513 8.3e-143 licT K CAT RNA binding domain
DOKAKFNJ_01514 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
DOKAKFNJ_01515 9.1e-302 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
DOKAKFNJ_01516 6.9e-178 D Alpha beta
DOKAKFNJ_01517 2.8e-304 E Amino acid permease
DOKAKFNJ_01519 9.8e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
DOKAKFNJ_01520 5.1e-108 ylbE GM NAD(P)H-binding
DOKAKFNJ_01521 2.9e-93 S VanZ like family
DOKAKFNJ_01522 8.9e-133 yebC K Transcriptional regulatory protein
DOKAKFNJ_01523 1.7e-179 comGA NU Type II IV secretion system protein
DOKAKFNJ_01524 1.7e-171 comGB NU type II secretion system
DOKAKFNJ_01525 3.1e-43 comGC U competence protein ComGC
DOKAKFNJ_01526 7.4e-71
DOKAKFNJ_01527 8.6e-41
DOKAKFNJ_01528 9.4e-76 comGF U Putative Competence protein ComGF
DOKAKFNJ_01529 1.6e-21
DOKAKFNJ_01530 3.5e-188 ytxK 2.1.1.72 L N-6 DNA Methylase
DOKAKFNJ_01531 6.3e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
DOKAKFNJ_01533 6.5e-151 L Belongs to the 'phage' integrase family
DOKAKFNJ_01535 2.2e-25 K Helix-turn-helix domain
DOKAKFNJ_01536 1.3e-20 XK27_07105 K Helix-turn-helix XRE-family like proteins
DOKAKFNJ_01537 1.1e-29 K Helix-turn-helix domain
DOKAKFNJ_01538 1.5e-26 S Domain of unknown function (DUF771)
DOKAKFNJ_01546 2.1e-10
DOKAKFNJ_01547 3.3e-11 S Single-strand binding protein family
DOKAKFNJ_01553 1.9e-21 S SLAP domain
DOKAKFNJ_01554 1.4e-24 srtA 3.4.22.70 M sortase family
DOKAKFNJ_01556 3e-41 M domain protein
DOKAKFNJ_01557 6.5e-15 S SLAP domain
DOKAKFNJ_01558 7.1e-32 M domain protein
DOKAKFNJ_01562 2.4e-141 U TraM recognition site of TraD and TraG
DOKAKFNJ_01563 2.3e-32 I mechanosensitive ion channel activity
DOKAKFNJ_01565 8.4e-15
DOKAKFNJ_01566 8.1e-160 trsE S COG0433 Predicted ATPase
DOKAKFNJ_01567 7.2e-33 M Peptidase family M23
DOKAKFNJ_01570 3.4e-17 CO COG0526, thiol-disulfide isomerase and thioredoxins
DOKAKFNJ_01576 5.8e-52 S COG0790 FOG TPR repeat, SEL1 subfamily
DOKAKFNJ_01577 7.2e-38 L Protein of unknown function (DUF3991)
DOKAKFNJ_01578 1.2e-111 S Fic/DOC family
DOKAKFNJ_01579 8.6e-48 E Pfam:DUF955
DOKAKFNJ_01580 3.4e-24 relB L Addiction module antitoxin, RelB DinJ family
DOKAKFNJ_01581 8.1e-17 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
DOKAKFNJ_01583 4.8e-133 topA2 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
DOKAKFNJ_01585 1.8e-23 S CAAX protease self-immunity
DOKAKFNJ_01586 1.1e-34
DOKAKFNJ_01587 1e-66 doc S Fic/DOC family
DOKAKFNJ_01589 8.7e-242 V N-6 DNA Methylase
DOKAKFNJ_01590 6.5e-82 bcgIB 2.1.1.72, 3.1.21.3 V Type I restriction modification DNA specificity domain
DOKAKFNJ_01591 1.6e-35 S Bacterial toxin of type II toxin-antitoxin system, YafQ
DOKAKFNJ_01592 5e-39 relB L RelB antitoxin
DOKAKFNJ_01594 2.2e-97 D VirC1 protein
DOKAKFNJ_01595 5e-15 S Domain of Unknown Function with PDB structure (DUF3850)
DOKAKFNJ_01597 1e-12
DOKAKFNJ_01598 7.6e-18 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
DOKAKFNJ_01599 1.3e-88 M Protein of unknown function (DUF3737)
DOKAKFNJ_01600 9.9e-227 patB 4.4.1.8 E Aminotransferase, class I
DOKAKFNJ_01601 7.2e-191 manA 5.3.1.8 G mannose-6-phosphate isomerase
DOKAKFNJ_01602 7.7e-67 S SdpI/YhfL protein family
DOKAKFNJ_01603 4.4e-129 K Transcriptional regulatory protein, C terminal
DOKAKFNJ_01604 7.2e-267 yclK 2.7.13.3, 4.6.1.1 T Histidine kinase
DOKAKFNJ_01605 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
DOKAKFNJ_01606 4.1e-73 vanZ V VanZ like family
DOKAKFNJ_01607 5.9e-17 vanZ V VanZ like family
DOKAKFNJ_01608 3.2e-253 pgi 5.3.1.9 G Belongs to the GPI family
DOKAKFNJ_01609 2.4e-216 EGP Major facilitator Superfamily
DOKAKFNJ_01610 3.9e-195 ampC V Beta-lactamase
DOKAKFNJ_01613 1.7e-262 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
DOKAKFNJ_01614 1.3e-113 tdk 2.7.1.21 F thymidine kinase
DOKAKFNJ_01615 3.1e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
DOKAKFNJ_01616 7.3e-155 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
DOKAKFNJ_01617 3.7e-190 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
DOKAKFNJ_01618 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
DOKAKFNJ_01619 3.8e-128 atpB C it plays a direct role in the translocation of protons across the membrane
DOKAKFNJ_01620 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DOKAKFNJ_01621 3.4e-46 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
DOKAKFNJ_01622 6.3e-91 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
DOKAKFNJ_01623 2.5e-283 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
DOKAKFNJ_01624 2e-172 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
DOKAKFNJ_01625 3.3e-240 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
DOKAKFNJ_01626 9e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
DOKAKFNJ_01627 2e-30 ywzB S Protein of unknown function (DUF1146)
DOKAKFNJ_01628 1.2e-177 mbl D Cell shape determining protein MreB Mrl
DOKAKFNJ_01629 1e-50 yidD S Could be involved in insertion of integral membrane proteins into the membrane
DOKAKFNJ_01630 3.3e-33 S Protein of unknown function (DUF2969)
DOKAKFNJ_01631 4.7e-216 rodA D Belongs to the SEDS family
DOKAKFNJ_01632 1.8e-78 usp6 T universal stress protein
DOKAKFNJ_01633 8.4e-39
DOKAKFNJ_01634 2.2e-238 rarA L recombination factor protein RarA
DOKAKFNJ_01635 1.3e-84 yueI S Protein of unknown function (DUF1694)
DOKAKFNJ_01636 1.4e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
DOKAKFNJ_01637 2.1e-294 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
DOKAKFNJ_01638 3.7e-213 iscS2 2.8.1.7 E Aminotransferase class V
DOKAKFNJ_01639 7.4e-225 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
DOKAKFNJ_01640 1.5e-183 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
DOKAKFNJ_01641 3.2e-119 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
DOKAKFNJ_01642 5.5e-44 3.6.4.12 S PD-(D/E)XK nuclease family transposase
DOKAKFNJ_01643 2.1e-65 2.4.1.83 GT2 S GtrA-like protein
DOKAKFNJ_01644 6.2e-171 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
DOKAKFNJ_01645 1.5e-94 S Protein of unknown function (DUF3990)
DOKAKFNJ_01646 2.9e-44
DOKAKFNJ_01648 0.0 3.6.3.8 P P-type ATPase
DOKAKFNJ_01649 3.3e-132 S AAA domain, putative AbiEii toxin, Type IV TA system
DOKAKFNJ_01650 2.5e-52
DOKAKFNJ_01651 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
DOKAKFNJ_01652 1.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
DOKAKFNJ_01653 5.7e-126 S Haloacid dehalogenase-like hydrolase
DOKAKFNJ_01654 2.3e-108 radC L DNA repair protein
DOKAKFNJ_01655 2.4e-176 mreB D cell shape determining protein MreB
DOKAKFNJ_01656 2e-147 mreC M Involved in formation and maintenance of cell shape
DOKAKFNJ_01657 2.7e-94 mreD
DOKAKFNJ_01659 6.4e-54 S Protein of unknown function (DUF3397)
DOKAKFNJ_01660 3.1e-77 mraZ K Belongs to the MraZ family
DOKAKFNJ_01661 7.2e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
DOKAKFNJ_01662 1.8e-54 ftsL D Cell division protein FtsL
DOKAKFNJ_01663 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
DOKAKFNJ_01664 1.5e-175 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
DOKAKFNJ_01665 5e-262 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
DOKAKFNJ_01666 5.7e-208 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
DOKAKFNJ_01667 4.5e-152 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
DOKAKFNJ_01668 1.3e-246 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
DOKAKFNJ_01669 1.7e-206 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
DOKAKFNJ_01670 7.3e-74 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
DOKAKFNJ_01671 1.7e-45 yggT S YGGT family
DOKAKFNJ_01672 8.2e-148 ylmH S S4 domain protein
DOKAKFNJ_01673 2.8e-74 gpsB D DivIVA domain protein
DOKAKFNJ_01674 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
DOKAKFNJ_01675 3.6e-31 cspA K 'Cold-shock' DNA-binding domain
DOKAKFNJ_01676 1.4e-101 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
DOKAKFNJ_01677 6.7e-37
DOKAKFNJ_01678 1.2e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
DOKAKFNJ_01679 3.2e-217 iscS 2.8.1.7 E Aminotransferase class V
DOKAKFNJ_01680 5.4e-56 XK27_04120 S Putative amino acid metabolism
DOKAKFNJ_01681 5.1e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
DOKAKFNJ_01682 3.9e-127 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
DOKAKFNJ_01683 8.3e-106 S Repeat protein
DOKAKFNJ_01684 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
DOKAKFNJ_01685 1.6e-294 L Nuclease-related domain
DOKAKFNJ_01686 1.2e-182 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
DOKAKFNJ_01687 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
DOKAKFNJ_01688 3.5e-32 ykzG S Belongs to the UPF0356 family
DOKAKFNJ_01689 0.0 1.3.5.4 C FAD binding domain
DOKAKFNJ_01690 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
DOKAKFNJ_01691 1.7e-249 yhdP S Transporter associated domain
DOKAKFNJ_01692 3.9e-119 C nitroreductase
DOKAKFNJ_01693 2.1e-39
DOKAKFNJ_01694 2.9e-87 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
DOKAKFNJ_01695 1.6e-80
DOKAKFNJ_01696 4.1e-147 glvR K Helix-turn-helix domain, rpiR family
DOKAKFNJ_01697 0.0 glvC 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
DOKAKFNJ_01698 5.4e-147 S hydrolase
DOKAKFNJ_01699 2e-160 rssA S Phospholipase, patatin family
DOKAKFNJ_01700 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
DOKAKFNJ_01701 3.1e-136 glcR K DeoR C terminal sensor domain
DOKAKFNJ_01702 2.5e-59 S Enterocin A Immunity
DOKAKFNJ_01703 1e-153 S hydrolase
DOKAKFNJ_01704 2.8e-134 ydhQ K UbiC transcription regulator-associated domain protein
DOKAKFNJ_01705 9.1e-175 rihB 3.2.2.1 F Nucleoside
DOKAKFNJ_01706 0.0 kup P Transport of potassium into the cell
DOKAKFNJ_01707 3.4e-126 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
DOKAKFNJ_01708 5.4e-167 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
DOKAKFNJ_01709 1.3e-161 2.7.7.12 C Domain of unknown function (DUF4931)
DOKAKFNJ_01710 1.3e-235 G Bacterial extracellular solute-binding protein
DOKAKFNJ_01711 2e-210 S Uncharacterized protein conserved in bacteria (DUF2325)
DOKAKFNJ_01712 2.3e-309 oppA3 E ABC transporter, substratebinding protein
DOKAKFNJ_01713 2.4e-60 ypaA S Protein of unknown function (DUF1304)
DOKAKFNJ_01714 2.1e-28 S Peptidase propeptide and YPEB domain
DOKAKFNJ_01715 1.1e-293 lacS G Transporter
DOKAKFNJ_01716 0.0 lacZ 3.2.1.23 G -beta-galactosidase
DOKAKFNJ_01717 2.1e-221 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
DOKAKFNJ_01718 2e-288 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
DOKAKFNJ_01719 9.7e-59 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
DOKAKFNJ_01720 3.5e-54 trxA O Belongs to the thioredoxin family
DOKAKFNJ_01721 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
DOKAKFNJ_01722 1.1e-50 yrzB S Belongs to the UPF0473 family
DOKAKFNJ_01723 6.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
DOKAKFNJ_01724 2e-42 yrzL S Belongs to the UPF0297 family
DOKAKFNJ_01725 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
DOKAKFNJ_01726 4.7e-228 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
DOKAKFNJ_01727 1.4e-181 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
DOKAKFNJ_01728 5.9e-216 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
DOKAKFNJ_01729 9.6e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
DOKAKFNJ_01730 9.6e-41 yajC U Preprotein translocase
DOKAKFNJ_01731 1.5e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
DOKAKFNJ_01732 1.7e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
DOKAKFNJ_01733 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
DOKAKFNJ_01734 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
DOKAKFNJ_01735 2.6e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
DOKAKFNJ_01736 1.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
DOKAKFNJ_01737 3.5e-75
DOKAKFNJ_01738 2.3e-181 M CHAP domain
DOKAKFNJ_01739 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
DOKAKFNJ_01740 3.7e-295 scrB 3.2.1.26 GH32 G invertase
DOKAKFNJ_01741 1.1e-183 scrR K helix_turn _helix lactose operon repressor
DOKAKFNJ_01742 8.8e-58 S Peptidase propeptide and YPEB domain
DOKAKFNJ_01743 1.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
DOKAKFNJ_01744 7.4e-169 coaA 2.7.1.33 F Pantothenic acid kinase
DOKAKFNJ_01745 7.1e-98 E GDSL-like Lipase/Acylhydrolase
DOKAKFNJ_01746 7.5e-74 yjcF S Acetyltransferase (GNAT) domain
DOKAKFNJ_01747 1.6e-143 aatB ET ABC transporter substrate-binding protein
DOKAKFNJ_01748 1e-105 glnQ 3.6.3.21 E ABC transporter
DOKAKFNJ_01749 1.5e-107 glnP P ABC transporter permease
DOKAKFNJ_01750 0.0 helD 3.6.4.12 L DNA helicase
DOKAKFNJ_01751 2.3e-116 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
DOKAKFNJ_01752 1.4e-126 pgm3 G Phosphoglycerate mutase family
DOKAKFNJ_01753 2.2e-240 S response to antibiotic
DOKAKFNJ_01754 3.2e-124
DOKAKFNJ_01755 0.0 3.6.3.8 P P-type ATPase
DOKAKFNJ_01756 4.3e-65 2.7.1.191 G PTS system fructose IIA component
DOKAKFNJ_01757 4.4e-43
DOKAKFNJ_01758 5.9e-09

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)