ORF_ID e_value Gene_name EC_number CAZy COGs Description
PMIFDDHC_00001 1.1e-08
PMIFDDHC_00002 1.7e-125 Z012_12235 S Baseplate J-like protein
PMIFDDHC_00003 9.5e-33
PMIFDDHC_00004 1.2e-48
PMIFDDHC_00005 5.7e-104
PMIFDDHC_00006 1.4e-45
PMIFDDHC_00007 1.2e-58 M LysM domain
PMIFDDHC_00008 0.0 3.4.14.13 M Phage tail tape measure protein TP901
PMIFDDHC_00010 9e-27
PMIFDDHC_00011 4e-56
PMIFDDHC_00012 9.7e-153 Z012_02110 S Protein of unknown function (DUF3383)
PMIFDDHC_00013 8e-57
PMIFDDHC_00014 2.9e-45
PMIFDDHC_00015 1.5e-75
PMIFDDHC_00016 2.1e-30 S Protein of unknown function (DUF4054)
PMIFDDHC_00017 3.5e-142 Z012_11565 S Uncharacterized protein conserved in bacteria (DUF2184)
PMIFDDHC_00018 1.6e-58
PMIFDDHC_00019 3.9e-87 S Uncharacterized protein conserved in bacteria (DUF2213)
PMIFDDHC_00020 1.1e-07 S Lysin motif
PMIFDDHC_00021 1e-97 S Phage Mu protein F like protein
PMIFDDHC_00022 7e-142 S Protein of unknown function (DUF1073)
PMIFDDHC_00023 1.8e-230 S Terminase-like family
PMIFDDHC_00024 1.5e-28 L Terminase small subunit
PMIFDDHC_00025 5.2e-10 hicA N HicA toxin of bacterial toxin-antitoxin,
PMIFDDHC_00026 2.7e-35 S HicB_like antitoxin of bacterial toxin-antitoxin system
PMIFDDHC_00034 1.6e-14
PMIFDDHC_00035 1.2e-40 rusA 3.1.22.4 L Endodeoxyribonuclease RusA
PMIFDDHC_00041 7.1e-51 dnaC L IstB-like ATP binding protein
PMIFDDHC_00042 2.7e-34 S Conserved phage C-terminus (Phg_2220_C)
PMIFDDHC_00043 6.5e-57 S Protein of unknown function (DUF1071)
PMIFDDHC_00048 1.8e-07 K Helix-turn-helix XRE-family like proteins
PMIFDDHC_00049 7.2e-10
PMIFDDHC_00053 4.3e-98 S AntA/AntB antirepressor
PMIFDDHC_00054 2.9e-12
PMIFDDHC_00059 1.3e-81 S DNA binding
PMIFDDHC_00060 9.5e-12 K Helix-turn-helix XRE-family like proteins
PMIFDDHC_00061 6.5e-23 K Cro/C1-type HTH DNA-binding domain
PMIFDDHC_00062 3.3e-18 S Pfam:Peptidase_M78
PMIFDDHC_00067 1.6e-20 S YjcQ protein
PMIFDDHC_00068 4.2e-180 sip L Belongs to the 'phage' integrase family
PMIFDDHC_00069 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PMIFDDHC_00070 2.2e-202 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PMIFDDHC_00071 0.0 dnaK O Heat shock 70 kDa protein
PMIFDDHC_00072 8e-68 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PMIFDDHC_00073 4.9e-193 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PMIFDDHC_00074 3.2e-175 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PMIFDDHC_00075 1.6e-155 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PMIFDDHC_00076 1.1e-59 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PMIFDDHC_00077 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PMIFDDHC_00078 3.2e-47 rplGA J ribosomal protein
PMIFDDHC_00079 8.8e-47 ylxR K Protein of unknown function (DUF448)
PMIFDDHC_00080 1.4e-196 nusA K Participates in both transcription termination and antitermination
PMIFDDHC_00081 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
PMIFDDHC_00082 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PMIFDDHC_00083 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PMIFDDHC_00084 5.7e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
PMIFDDHC_00085 8.4e-140 cdsA 2.7.7.41 I Belongs to the CDS family
PMIFDDHC_00086 5.4e-138 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PMIFDDHC_00087 5.3e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PMIFDDHC_00088 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PMIFDDHC_00089 3.1e-184 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PMIFDDHC_00090 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
PMIFDDHC_00091 3e-195 yabB 2.1.1.223 L Methyltransferase small domain
PMIFDDHC_00092 2.9e-116 plsC 2.3.1.51 I Acyltransferase
PMIFDDHC_00093 3.9e-223 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
PMIFDDHC_00094 0.0 pepO 3.4.24.71 O Peptidase family M13
PMIFDDHC_00095 0.0 mdlB V ABC transporter
PMIFDDHC_00096 0.0 mdlA V ABC transporter
PMIFDDHC_00097 5.5e-30 yneF S Uncharacterised protein family (UPF0154)
PMIFDDHC_00098 3e-38 ynzC S UPF0291 protein
PMIFDDHC_00099 2e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PMIFDDHC_00100 9.8e-146 E GDSL-like Lipase/Acylhydrolase family
PMIFDDHC_00101 5.4e-121 ung2 3.2.2.27 L Uracil-DNA glycosylase
PMIFDDHC_00102 4.6e-213 S SLAP domain
PMIFDDHC_00103 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PMIFDDHC_00104 3.2e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PMIFDDHC_00105 3.4e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PMIFDDHC_00106 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PMIFDDHC_00107 4.9e-228 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PMIFDDHC_00108 6e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PMIFDDHC_00109 2.7e-258 yfnA E amino acid
PMIFDDHC_00110 0.0 V FtsX-like permease family
PMIFDDHC_00111 4.1e-133 cysA V ABC transporter, ATP-binding protein
PMIFDDHC_00112 3.4e-23
PMIFDDHC_00114 2.5e-288 pipD E Dipeptidase
PMIFDDHC_00115 3.6e-161 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PMIFDDHC_00116 0.0 smc D Required for chromosome condensation and partitioning
PMIFDDHC_00117 1.9e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PMIFDDHC_00118 2.1e-308 oppA E ABC transporter substrate-binding protein
PMIFDDHC_00119 1.2e-300 oppA E ABC transporter substrate-binding protein
PMIFDDHC_00120 1.2e-134 oppC P Binding-protein-dependent transport system inner membrane component
PMIFDDHC_00121 5.7e-172 oppB P ABC transporter permease
PMIFDDHC_00122 1.5e-170 oppF P Belongs to the ABC transporter superfamily
PMIFDDHC_00123 1.1e-192 oppD P Belongs to the ABC transporter superfamily
PMIFDDHC_00124 0.0 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
PMIFDDHC_00125 8.2e-85 scrR K Periplasmic binding protein domain
PMIFDDHC_00127 1.4e-38
PMIFDDHC_00128 2.8e-19 S Phage uncharacterised protein (Phage_XkdX)
PMIFDDHC_00129 1.1e-07
PMIFDDHC_00131 7.5e-17
PMIFDDHC_00132 2.9e-29
PMIFDDHC_00133 8.8e-172 M Glycosyl hydrolases family 25
PMIFDDHC_00134 5.9e-24
PMIFDDHC_00135 2.5e-35 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PMIFDDHC_00136 1.5e-102 srtA 3.4.22.70 M sortase family
PMIFDDHC_00137 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PMIFDDHC_00138 1.2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PMIFDDHC_00139 8.5e-133 cobB K SIR2 family
PMIFDDHC_00140 9.2e-92 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
PMIFDDHC_00141 1.3e-124 terC P Integral membrane protein TerC family
PMIFDDHC_00142 5.8e-64 yeaO S Protein of unknown function, DUF488
PMIFDDHC_00143 8.9e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PMIFDDHC_00144 1.3e-290 glnP P ABC transporter permease
PMIFDDHC_00145 3.4e-135 glnQ E ABC transporter, ATP-binding protein
PMIFDDHC_00146 7.3e-148 S Protein of unknown function (DUF805)
PMIFDDHC_00147 2.7e-97 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
PMIFDDHC_00149 1.5e-36
PMIFDDHC_00150 4.4e-43 P ABC transporter
PMIFDDHC_00151 2.3e-134 P ABC transporter
PMIFDDHC_00152 8.9e-133 L Phage integrase family
PMIFDDHC_00153 5.1e-66 rpsI J Belongs to the universal ribosomal protein uS9 family
PMIFDDHC_00154 5.9e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PMIFDDHC_00155 3e-150 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PMIFDDHC_00156 8.5e-137 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PMIFDDHC_00157 3.5e-157 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PMIFDDHC_00158 1.4e-153 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PMIFDDHC_00159 1.4e-60 rplQ J Ribosomal protein L17
PMIFDDHC_00160 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PMIFDDHC_00161 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PMIFDDHC_00162 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PMIFDDHC_00163 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PMIFDDHC_00164 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PMIFDDHC_00165 1e-119 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PMIFDDHC_00166 9e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PMIFDDHC_00167 2.6e-71 rplO J Binds to the 23S rRNA
PMIFDDHC_00168 2.3e-24 rpmD J Ribosomal protein L30
PMIFDDHC_00169 4.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PMIFDDHC_00170 3.6e-55 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PMIFDDHC_00171 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PMIFDDHC_00172 3.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PMIFDDHC_00173 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PMIFDDHC_00174 5.5e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PMIFDDHC_00175 3.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PMIFDDHC_00176 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PMIFDDHC_00177 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PMIFDDHC_00178 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
PMIFDDHC_00179 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PMIFDDHC_00180 2.7e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PMIFDDHC_00181 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PMIFDDHC_00182 1.1e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PMIFDDHC_00183 3.6e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PMIFDDHC_00184 3.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PMIFDDHC_00185 2.1e-106 rplD J Forms part of the polypeptide exit tunnel
PMIFDDHC_00186 9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PMIFDDHC_00187 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PMIFDDHC_00188 7e-43 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PMIFDDHC_00189 6.6e-182 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
PMIFDDHC_00190 7.7e-284 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
PMIFDDHC_00191 0.0 uup S ABC transporter, ATP-binding protein
PMIFDDHC_00192 5.8e-112 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PMIFDDHC_00193 1.2e-100 nusG K Participates in transcription elongation, termination and antitermination
PMIFDDHC_00194 1.2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PMIFDDHC_00195 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PMIFDDHC_00196 2.8e-157 pstS P Phosphate
PMIFDDHC_00197 1.9e-162 pstC P probably responsible for the translocation of the substrate across the membrane
PMIFDDHC_00198 6.5e-154 pstA P Phosphate transport system permease protein PstA
PMIFDDHC_00199 5e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PMIFDDHC_00200 3.9e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PMIFDDHC_00201 2.2e-117 phoU P Plays a role in the regulation of phosphate uptake
PMIFDDHC_00202 3.9e-201 tcsA S ABC transporter substrate-binding protein PnrA-like
PMIFDDHC_00203 6.9e-181 tcsA S ABC transporter substrate-binding protein PnrA-like
PMIFDDHC_00204 1.3e-282 xylG 3.6.3.17 S ABC transporter
PMIFDDHC_00205 1.9e-198 yufP S Belongs to the binding-protein-dependent transport system permease family
PMIFDDHC_00206 4.4e-172 yufQ S Belongs to the binding-protein-dependent transport system permease family
PMIFDDHC_00207 3.7e-159 yeaE S Aldo/keto reductase family
PMIFDDHC_00208 2.1e-134 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PMIFDDHC_00209 8.5e-119 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PMIFDDHC_00210 1.6e-123 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
PMIFDDHC_00211 9.4e-72
PMIFDDHC_00212 3.7e-140 cof S haloacid dehalogenase-like hydrolase
PMIFDDHC_00213 8.2e-230 pbuG S permease
PMIFDDHC_00214 2.1e-76 S ABC-2 family transporter protein
PMIFDDHC_00215 4.7e-60 S ABC-2 family transporter protein
PMIFDDHC_00216 2.4e-92 V ABC transporter, ATP-binding protein
PMIFDDHC_00218 3.7e-27 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PMIFDDHC_00219 3.5e-101 ylbE GM NAD(P)H-binding
PMIFDDHC_00220 5.8e-94 S VanZ like family
PMIFDDHC_00221 8.9e-133 yebC K Transcriptional regulatory protein
PMIFDDHC_00222 1.7e-179 comGA NU Type II IV secretion system protein
PMIFDDHC_00223 1.7e-171 comGB NU type II secretion system
PMIFDDHC_00224 3.1e-43 comGC U competence protein ComGC
PMIFDDHC_00225 7.4e-71
PMIFDDHC_00226 8.6e-41
PMIFDDHC_00227 9.4e-76 comGF U Putative Competence protein ComGF
PMIFDDHC_00228 1.6e-21
PMIFDDHC_00229 3.5e-188 ytxK 2.1.1.72 L N-6 DNA Methylase
PMIFDDHC_00230 6.3e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PMIFDDHC_00232 1.4e-153 L Belongs to the 'phage' integrase family
PMIFDDHC_00233 5e-08 S Pfam:DUF955
PMIFDDHC_00234 1.2e-23 K Helix-turn-helix domain
PMIFDDHC_00235 9e-22 XK27_07105 K Helix-turn-helix XRE-family like proteins
PMIFDDHC_00236 2.6e-31 K Helix-turn-helix domain
PMIFDDHC_00238 4.1e-09 S Arc-like DNA binding domain
PMIFDDHC_00240 9e-21 K Conserved phage C-terminus (Phg_2220_C)
PMIFDDHC_00241 1e-25 S Domain of unknown function (DUF771)
PMIFDDHC_00248 2.6e-11 ssb L Single-strand binding protein family
PMIFDDHC_00253 2.3e-24 S SLAP domain
PMIFDDHC_00254 6.3e-25 srtA 3.4.22.70 M sortase family
PMIFDDHC_00256 5.6e-40 M domain protein
PMIFDDHC_00257 6.7e-15 S SLAP domain
PMIFDDHC_00258 8.4e-33 M domain protein
PMIFDDHC_00262 3.4e-140 U TraM recognition site of TraD and TraG
PMIFDDHC_00263 3.9e-32 I mechanosensitive ion channel activity
PMIFDDHC_00265 8.4e-15
PMIFDDHC_00266 1.8e-159 trsE S COG0433 Predicted ATPase
PMIFDDHC_00267 1.2e-32 M Peptidase family M23
PMIFDDHC_00270 3.4e-17 CO COG0526, thiol-disulfide isomerase and thioredoxins
PMIFDDHC_00276 3.4e-52 S COG0790 FOG TPR repeat, SEL1 subfamily
PMIFDDHC_00277 1.7e-39 L Protein of unknown function (DUF3991)
PMIFDDHC_00278 4.6e-111 S Fic/DOC family
PMIFDDHC_00279 1.9e-47 L Psort location Cytoplasmic, score
PMIFDDHC_00280 3.4e-24 relB L Addiction module antitoxin, RelB DinJ family
PMIFDDHC_00281 9.6e-18 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
PMIFDDHC_00283 1.2e-134 topA2 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
PMIFDDHC_00284 1.4e-23 S CAAX protease self-immunity
PMIFDDHC_00285 1.1e-34
PMIFDDHC_00286 8.7e-66 doc S Fic/DOC family
PMIFDDHC_00288 3.3e-241 V N-6 DNA Methylase
PMIFDDHC_00289 2.2e-77 bcgIB 2.1.1.72, 3.1.21.3 V Type I restriction modification DNA specificity domain
PMIFDDHC_00290 1.6e-35 S Bacterial toxin of type II toxin-antitoxin system, YafQ
PMIFDDHC_00291 1.7e-39 relB L RelB antitoxin
PMIFDDHC_00293 2.9e-97 D VirC1 protein
PMIFDDHC_00294 7.9e-49 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PMIFDDHC_00295 7e-135 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PMIFDDHC_00296 9.8e-69 GM NAD(P)H-binding
PMIFDDHC_00297 8.9e-34 S Domain of unknown function (DUF4440)
PMIFDDHC_00298 6.6e-90 K LysR substrate binding domain
PMIFDDHC_00300 3.3e-45 K Tetracycline repressor, C-terminal all-alpha domain
PMIFDDHC_00301 3.2e-79 S X-Pro dipeptidyl-peptidase (S15 family)
PMIFDDHC_00302 7.7e-10 C Flavodoxin
PMIFDDHC_00303 3.4e-126 1.3.5.4 C FAD binding domain
PMIFDDHC_00304 1.7e-213 1.3.5.4 C FAD binding domain
PMIFDDHC_00305 4.5e-194 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PMIFDDHC_00306 7.4e-97 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
PMIFDDHC_00307 2.4e-133 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
PMIFDDHC_00308 2.2e-85 S ECF transporter, substrate-specific component
PMIFDDHC_00309 1.4e-130 fat 3.1.2.21 I Acyl-ACP thioesterase
PMIFDDHC_00310 5.1e-156 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PMIFDDHC_00311 1.8e-59 yabA L Involved in initiation control of chromosome replication
PMIFDDHC_00312 1.5e-155 holB 2.7.7.7 L DNA polymerase III
PMIFDDHC_00313 8.9e-53 yaaQ S Cyclic-di-AMP receptor
PMIFDDHC_00314 1.6e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PMIFDDHC_00315 1.1e-34 S Protein of unknown function (DUF2508)
PMIFDDHC_00316 1.6e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PMIFDDHC_00317 8.2e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PMIFDDHC_00318 1.2e-35 M lipopolysaccharide 3-alpha-galactosyltransferase activity
PMIFDDHC_00319 5.7e-106 2.4.1.58 GT8 M family 8
PMIFDDHC_00320 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PMIFDDHC_00321 2.2e-90 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PMIFDDHC_00322 9e-26
PMIFDDHC_00323 1.3e-116 rsmC 2.1.1.172 J Methyltransferase
PMIFDDHC_00324 8.7e-140 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
PMIFDDHC_00325 1.8e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PMIFDDHC_00326 7e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PMIFDDHC_00327 1.5e-11 GT2,GT4 M family 8
PMIFDDHC_00328 1.3e-273 pipD E Dipeptidase
PMIFDDHC_00329 1.5e-102 devA 3.6.3.25 V ABC transporter, ATP-binding protein
PMIFDDHC_00330 3.3e-176 hrtB V ABC transporter permease
PMIFDDHC_00331 3.2e-92 ygfC K Bacterial regulatory proteins, tetR family
PMIFDDHC_00332 3.5e-111 G phosphoglycerate mutase
PMIFDDHC_00333 6e-140 aroD S Alpha/beta hydrolase family
PMIFDDHC_00334 2.2e-142 S Belongs to the UPF0246 family
PMIFDDHC_00335 8.6e-82 yxaM EGP Major facilitator Superfamily
PMIFDDHC_00336 5.2e-69 yxaM EGP Major facilitator Superfamily
PMIFDDHC_00337 2.9e-117 fbiB 6.3.2.12, 6.3.2.17, 6.3.2.31, 6.3.2.34 S F420-0:Gamma-glutamyl ligase
PMIFDDHC_00338 1e-79 S AAA domain
PMIFDDHC_00339 3.3e-61 3.6.1.55 F NUDIX domain
PMIFDDHC_00340 0.0 XK27_08315 M Sulfatase
PMIFDDHC_00341 1.6e-111 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PMIFDDHC_00342 2.1e-202 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PMIFDDHC_00343 7.1e-98 G Aldose 1-epimerase
PMIFDDHC_00344 4.2e-264 S Fibronectin type III domain
PMIFDDHC_00345 1.6e-243 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PMIFDDHC_00346 9e-54
PMIFDDHC_00348 4.6e-257 pepC 3.4.22.40 E aminopeptidase
PMIFDDHC_00349 1.3e-122 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PMIFDDHC_00350 1.7e-301 oppA E ABC transporter, substratebinding protein
PMIFDDHC_00351 1.6e-310 oppA E ABC transporter, substratebinding protein
PMIFDDHC_00352 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
PMIFDDHC_00353 4.5e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PMIFDDHC_00354 1e-107 ypsA S Belongs to the UPF0398 family
PMIFDDHC_00355 1.1e-68 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PMIFDDHC_00356 3.1e-217 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PMIFDDHC_00357 4e-242 cpdA S Calcineurin-like phosphoesterase
PMIFDDHC_00358 7.6e-79
PMIFDDHC_00359 5.8e-211 M Glycosyl hydrolases family 25
PMIFDDHC_00360 8e-111 XK27_00160 S Domain of unknown function (DUF5052)
PMIFDDHC_00361 4.1e-67
PMIFDDHC_00362 5.4e-203 xerS L Belongs to the 'phage' integrase family
PMIFDDHC_00363 1.5e-304 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PMIFDDHC_00364 4e-145 yfeO P Voltage gated chloride channel
PMIFDDHC_00365 4e-184 5.3.3.2 C FMN-dependent dehydrogenase
PMIFDDHC_00366 2.8e-52
PMIFDDHC_00367 3.8e-42
PMIFDDHC_00368 1e-229 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PMIFDDHC_00369 7.3e-297 ybeC E amino acid
PMIFDDHC_00370 2.6e-157 S Sucrose-6F-phosphate phosphohydrolase
PMIFDDHC_00371 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
PMIFDDHC_00372 2.5e-39 rpmE2 J Ribosomal protein L31
PMIFDDHC_00373 8e-260 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PMIFDDHC_00374 1.6e-250 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PMIFDDHC_00375 1.7e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PMIFDDHC_00376 1e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PMIFDDHC_00377 3.4e-129 S (CBS) domain
PMIFDDHC_00378 1.5e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PMIFDDHC_00379 5.1e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PMIFDDHC_00380 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PMIFDDHC_00381 7.4e-40 yabO J S4 domain protein
PMIFDDHC_00382 7.5e-103 G Phosphoglycerate mutase family
PMIFDDHC_00383 7.8e-140 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PMIFDDHC_00385 3.7e-174 L Bifunctional protein
PMIFDDHC_00386 7.4e-128 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
PMIFDDHC_00387 4.5e-192 I transferase activity, transferring acyl groups other than amino-acyl groups
PMIFDDHC_00388 5.6e-179 S PFAM Archaeal ATPase
PMIFDDHC_00389 2.4e-73 S cog cog1373
PMIFDDHC_00390 1.9e-117 cps1D M Domain of unknown function (DUF4422)
PMIFDDHC_00391 6.7e-110 rfbP M Bacterial sugar transferase
PMIFDDHC_00392 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PMIFDDHC_00393 3.5e-32 ykzG S Belongs to the UPF0356 family
PMIFDDHC_00394 2.6e-112 ltrA S Bacterial low temperature requirement A protein (LtrA)
PMIFDDHC_00395 7.4e-120 3.6.1.55 F NUDIX domain
PMIFDDHC_00396 1.8e-243 brnQ U Component of the transport system for branched-chain amino acids
PMIFDDHC_00397 0.0 L Plasmid pRiA4b ORF-3-like protein
PMIFDDHC_00398 3.2e-65 K HxlR family
PMIFDDHC_00399 3.9e-47
PMIFDDHC_00400 1.4e-212 4.2.1.6, 5.1.2.2 M Mandelate racemase muconate lactonizing enzyme
PMIFDDHC_00401 3.4e-62 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PMIFDDHC_00402 1.3e-07 S Protein of unknown function (DUF3021)
PMIFDDHC_00403 1.1e-71 yphH S Cupin domain
PMIFDDHC_00404 2.1e-285 lsa S ABC transporter
PMIFDDHC_00405 2.4e-44
PMIFDDHC_00406 1.3e-122 sdaAB 4.3.1.17 E Serine dehydratase beta chain
PMIFDDHC_00407 3.8e-154 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
PMIFDDHC_00408 9.7e-52 S Iron-sulfur cluster assembly protein
PMIFDDHC_00409 6.9e-116 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PMIFDDHC_00410 5e-48 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
PMIFDDHC_00411 3.7e-243 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
PMIFDDHC_00412 3.9e-12 tetP J elongation factor G
PMIFDDHC_00413 1.2e-160 yvgN C Aldo keto reductase
PMIFDDHC_00414 2e-155 P CorA-like Mg2+ transporter protein
PMIFDDHC_00415 5.6e-132 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PMIFDDHC_00416 1.7e-174 ABC-SBP S ABC transporter
PMIFDDHC_00417 5.6e-121 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
PMIFDDHC_00418 2.4e-136 XK27_08845 S ABC transporter, ATP-binding protein
PMIFDDHC_00419 5.2e-248 G Major Facilitator
PMIFDDHC_00420 4.1e-18
PMIFDDHC_00421 2.6e-103 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
PMIFDDHC_00422 4.1e-176 K AI-2E family transporter
PMIFDDHC_00423 1e-108 oppA E ABC transporter substrate-binding protein
PMIFDDHC_00424 9.2e-211 oppA E ABC transporter substrate-binding protein
PMIFDDHC_00425 5.2e-117 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
PMIFDDHC_00426 8.4e-74 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PMIFDDHC_00427 3.8e-27 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PMIFDDHC_00429 2.6e-146 S Putative ABC-transporter type IV
PMIFDDHC_00430 1.1e-223 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PMIFDDHC_00431 3.3e-275 yjeM E Amino Acid
PMIFDDHC_00432 5.8e-83 S Fic/DOC family
PMIFDDHC_00433 9.9e-180
PMIFDDHC_00434 3.1e-93
PMIFDDHC_00435 2.2e-78
PMIFDDHC_00436 2.2e-85 S Protein of unknown function (DUF805)
PMIFDDHC_00437 2.3e-69 O OsmC-like protein
PMIFDDHC_00438 7.2e-209 EGP Major facilitator Superfamily
PMIFDDHC_00439 2.6e-103 sptS 2.7.13.3 T Histidine kinase
PMIFDDHC_00440 1.1e-103 sptS 2.7.13.3 T Histidine kinase
PMIFDDHC_00441 3.2e-105 K response regulator
PMIFDDHC_00442 3.4e-100 2.7.6.5 T Region found in RelA / SpoT proteins
PMIFDDHC_00444 2.6e-168 M Glycosyl hydrolases family 25
PMIFDDHC_00445 2e-30
PMIFDDHC_00446 1.7e-16
PMIFDDHC_00448 1.1e-07
PMIFDDHC_00449 2.8e-19 S Phage uncharacterised protein (Phage_XkdX)
PMIFDDHC_00450 1.2e-40
PMIFDDHC_00452 1.4e-126 pgm3 G Phosphoglycerate mutase family
PMIFDDHC_00453 1.7e-123 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
PMIFDDHC_00454 0.0 helD 3.6.4.12 L DNA helicase
PMIFDDHC_00455 1.5e-107 glnP P ABC transporter permease
PMIFDDHC_00456 1e-105 glnQ 3.6.3.21 E ABC transporter
PMIFDDHC_00457 1.6e-143 aatB ET ABC transporter substrate-binding protein
PMIFDDHC_00458 7.5e-74 yjcF S Acetyltransferase (GNAT) domain
PMIFDDHC_00459 7.1e-98 E GDSL-like Lipase/Acylhydrolase
PMIFDDHC_00460 2.5e-169 coaA 2.7.1.33 F Pantothenic acid kinase
PMIFDDHC_00461 1.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PMIFDDHC_00462 8.8e-58 S Peptidase propeptide and YPEB domain
PMIFDDHC_00463 1e-53 trxA O Belongs to the thioredoxin family
PMIFDDHC_00464 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PMIFDDHC_00465 1.1e-50 yrzB S Belongs to the UPF0473 family
PMIFDDHC_00466 6.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PMIFDDHC_00467 2e-42 yrzL S Belongs to the UPF0297 family
PMIFDDHC_00468 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PMIFDDHC_00469 2e-226 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PMIFDDHC_00470 1.4e-181 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
PMIFDDHC_00471 6.2e-210 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PMIFDDHC_00472 9.6e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PMIFDDHC_00473 9.6e-41 yajC U Preprotein translocase
PMIFDDHC_00474 1.5e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PMIFDDHC_00475 5e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PMIFDDHC_00476 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PMIFDDHC_00477 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PMIFDDHC_00478 2.6e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PMIFDDHC_00479 1.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PMIFDDHC_00480 1.7e-74
PMIFDDHC_00481 2.3e-181 M CHAP domain
PMIFDDHC_00482 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
PMIFDDHC_00483 3.7e-295 scrB 3.2.1.26 GH32 G invertase
PMIFDDHC_00484 1.1e-183 scrR K helix_turn _helix lactose operon repressor
PMIFDDHC_00485 1.2e-80 lacI3 K helix_turn _helix lactose operon repressor
PMIFDDHC_00486 6.3e-232 malE G Bacterial extracellular solute-binding protein
PMIFDDHC_00487 0.0 O Belongs to the peptidase S8 family
PMIFDDHC_00488 6.4e-174 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
PMIFDDHC_00489 1.9e-93 dhaL 2.7.1.121 S Dak2
PMIFDDHC_00490 2.9e-55 dhaM 2.7.1.121 S PTS system fructose IIA component
PMIFDDHC_00491 5.2e-122 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PMIFDDHC_00492 2.5e-16 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PMIFDDHC_00493 2.5e-70 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PMIFDDHC_00494 5.2e-111 K LysR family
PMIFDDHC_00495 3.7e-273 1.3.5.4 C FMN_bind
PMIFDDHC_00496 1.3e-109 K LysR family
PMIFDDHC_00497 2.7e-226 P Sodium:sulfate symporter transmembrane region
PMIFDDHC_00498 2.3e-275 1.3.5.4 C FMN_bind
PMIFDDHC_00499 1.9e-37
PMIFDDHC_00500 7e-50
PMIFDDHC_00501 8.7e-53 S haloacid dehalogenase-like hydrolase
PMIFDDHC_00502 7.4e-86 S haloacid dehalogenase-like hydrolase
PMIFDDHC_00503 8.5e-290 V ABC-type multidrug transport system, ATPase and permease components
PMIFDDHC_00504 2.9e-277 V ABC-type multidrug transport system, ATPase and permease components
PMIFDDHC_00505 1.5e-64 arsC 1.20.4.1 P Belongs to the ArsC family
PMIFDDHC_00506 8.5e-178 I Carboxylesterase family
PMIFDDHC_00508 1e-205 M Glycosyl hydrolases family 25
PMIFDDHC_00509 2.8e-157 cinI S Serine hydrolase (FSH1)
PMIFDDHC_00510 4.3e-298 S Predicted membrane protein (DUF2207)
PMIFDDHC_00511 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
PMIFDDHC_00513 7.8e-255 S Uncharacterized protein conserved in bacteria (DUF2325)
PMIFDDHC_00514 3.7e-151 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PMIFDDHC_00515 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
PMIFDDHC_00516 1.3e-47 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PMIFDDHC_00517 1e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PMIFDDHC_00518 4.9e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PMIFDDHC_00519 3.4e-71 yqhY S Asp23 family, cell envelope-related function
PMIFDDHC_00520 1.1e-63 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PMIFDDHC_00521 6.7e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PMIFDDHC_00522 2.9e-193 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PMIFDDHC_00523 3.7e-35 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PMIFDDHC_00524 1e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PMIFDDHC_00525 2.3e-153 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PMIFDDHC_00526 2.6e-300 recN L May be involved in recombinational repair of damaged DNA
PMIFDDHC_00527 1.1e-77 6.3.3.2 S ASCH
PMIFDDHC_00528 2.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PMIFDDHC_00529 1.1e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PMIFDDHC_00530 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PMIFDDHC_00531 5.7e-172 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PMIFDDHC_00532 1.6e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PMIFDDHC_00533 1.1e-138 stp 3.1.3.16 T phosphatase
PMIFDDHC_00534 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
PMIFDDHC_00535 4.5e-163 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PMIFDDHC_00536 2.9e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PMIFDDHC_00537 4.1e-124 thiN 2.7.6.2 H thiamine pyrophosphokinase
PMIFDDHC_00538 1.4e-30
PMIFDDHC_00539 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PMIFDDHC_00540 4e-57 asp S Asp23 family, cell envelope-related function
PMIFDDHC_00541 7.6e-305 yloV S DAK2 domain fusion protein YloV
PMIFDDHC_00542 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PMIFDDHC_00543 8.3e-182 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PMIFDDHC_00544 9.8e-36 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PMIFDDHC_00545 4.4e-135 recO L Involved in DNA repair and RecF pathway recombination
PMIFDDHC_00546 4.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PMIFDDHC_00547 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PMIFDDHC_00548 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PMIFDDHC_00549 9.9e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PMIFDDHC_00550 1.4e-127 S Peptidase family M23
PMIFDDHC_00551 4.8e-81 mutT 3.6.1.55 F NUDIX domain
PMIFDDHC_00552 3.5e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
PMIFDDHC_00553 1.4e-152 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PMIFDDHC_00554 1.7e-240 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PMIFDDHC_00555 1.4e-60 yvoA_1 K Transcriptional regulator, GntR family
PMIFDDHC_00556 9.6e-124 skfE V ATPases associated with a variety of cellular activities
PMIFDDHC_00557 4.5e-141
PMIFDDHC_00558 5.1e-137
PMIFDDHC_00559 6.7e-145
PMIFDDHC_00560 1.4e-26
PMIFDDHC_00561 3.9e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PMIFDDHC_00562 7.5e-143
PMIFDDHC_00563 9.7e-169
PMIFDDHC_00564 1.7e-265 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
PMIFDDHC_00565 1.3e-116 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
PMIFDDHC_00566 6.9e-184 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PMIFDDHC_00567 2.1e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
PMIFDDHC_00568 1.4e-178 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
PMIFDDHC_00569 4.8e-136 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
PMIFDDHC_00570 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
PMIFDDHC_00571 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PMIFDDHC_00572 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PMIFDDHC_00573 2.4e-89 ypmB S Protein conserved in bacteria
PMIFDDHC_00574 1.7e-259 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
PMIFDDHC_00575 1.3e-114 dnaD L DnaD domain protein
PMIFDDHC_00576 2.7e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PMIFDDHC_00577 0.0 1.3.5.4 C FAD binding domain
PMIFDDHC_00578 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PMIFDDHC_00579 1.7e-249 yhdP S Transporter associated domain
PMIFDDHC_00580 2.3e-119 C nitroreductase
PMIFDDHC_00581 2.1e-39
PMIFDDHC_00582 6.4e-87 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PMIFDDHC_00583 1.6e-80
PMIFDDHC_00584 2.1e-38 glvR K Helix-turn-helix domain, rpiR family
PMIFDDHC_00585 2.3e-83 glvR K Helix-turn-helix domain, rpiR family
PMIFDDHC_00586 0.0 glvC 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
PMIFDDHC_00587 2.5e-71 S hydrolase
PMIFDDHC_00588 8.5e-63 S hydrolase
PMIFDDHC_00589 2.6e-160 rssA S Phospholipase, patatin family
PMIFDDHC_00590 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PMIFDDHC_00591 6.9e-136 glcR K DeoR C terminal sensor domain
PMIFDDHC_00592 2.5e-59 S Enterocin A Immunity
PMIFDDHC_00593 1.2e-154 S hydrolase
PMIFDDHC_00594 3e-133 ydhQ K UbiC transcription regulator-associated domain protein
PMIFDDHC_00595 2.7e-174 rihB 3.2.2.1 F Nucleoside
PMIFDDHC_00596 0.0 kup P Transport of potassium into the cell
PMIFDDHC_00597 3.4e-126 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PMIFDDHC_00598 5.4e-167 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PMIFDDHC_00599 7.7e-162 2.7.7.12 C Domain of unknown function (DUF4931)
PMIFDDHC_00600 4.4e-285 pipD E Dipeptidase
PMIFDDHC_00601 1.3e-47 adk 2.7.4.3 F AAA domain
PMIFDDHC_00602 2.1e-80 K acetyltransferase
PMIFDDHC_00603 1.4e-245 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PMIFDDHC_00604 3.4e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PMIFDDHC_00605 1.5e-46 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PMIFDDHC_00606 6.9e-69 S Domain of unknown function (DUF1934)
PMIFDDHC_00607 3.9e-267 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
PMIFDDHC_00608 4.5e-42
PMIFDDHC_00609 3.3e-169 GK ROK family
PMIFDDHC_00610 1.1e-240 U The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMIFDDHC_00611 3.1e-130 K Helix-turn-helix domain, rpiR family
PMIFDDHC_00612 1.2e-290 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PMIFDDHC_00613 6e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PMIFDDHC_00614 6.6e-307 S SLAP domain
PMIFDDHC_00615 5.3e-80
PMIFDDHC_00616 3.8e-15 S Domain of Unknown Function with PDB structure (DUF3850)
PMIFDDHC_00618 2.9e-12
PMIFDDHC_00619 2e-18 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PMIFDDHC_00620 2.5e-89 M Protein of unknown function (DUF3737)
PMIFDDHC_00621 9.9e-227 patB 4.4.1.8 E Aminotransferase, class I
PMIFDDHC_00622 7.2e-191 manA 5.3.1.8 G mannose-6-phosphate isomerase
PMIFDDHC_00623 7.7e-67 S SdpI/YhfL protein family
PMIFDDHC_00624 4.4e-129 K Transcriptional regulatory protein, C terminal
PMIFDDHC_00625 7.2e-267 yclK 2.7.13.3, 4.6.1.1 T Histidine kinase
PMIFDDHC_00626 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PMIFDDHC_00627 3.8e-105 vanZ V VanZ like family
PMIFDDHC_00628 3.2e-253 pgi 5.3.1.9 G Belongs to the GPI family
PMIFDDHC_00629 3.8e-217 EGP Major facilitator Superfamily
PMIFDDHC_00630 7.9e-210 S Bacterial protein of unknown function (DUF871)
PMIFDDHC_00632 2.3e-43 ybhL S Belongs to the BI1 family
PMIFDDHC_00633 6e-46 L An automated process has identified a potential problem with this gene model
PMIFDDHC_00634 7.4e-49 S Peptidase propeptide and YPEB domain
PMIFDDHC_00635 4.1e-33 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
PMIFDDHC_00637 4.1e-153 L Belongs to the 'phage' integrase family
PMIFDDHC_00639 5.5e-07 S Pfam:DUF955
PMIFDDHC_00640 2.6e-18 K Helix-turn-helix XRE-family like proteins
PMIFDDHC_00641 4.1e-15 K Helix-turn-helix XRE-family like proteins
PMIFDDHC_00642 4e-24 S Domain of unknown function (DUF771)
PMIFDDHC_00644 1.9e-10
PMIFDDHC_00648 1.6e-48 S Protein of unknown function (DUF1351)
PMIFDDHC_00649 5.4e-45 S ERF superfamily
PMIFDDHC_00650 5.4e-32 K Helix-turn-helix domain
PMIFDDHC_00651 2.7e-15 K Transcriptional regulator
PMIFDDHC_00652 2.6e-21 radC L DNA repair protein
PMIFDDHC_00663 4.5e-49 Q DNA (cytosine-5-)-methyltransferase activity
PMIFDDHC_00668 2e-29
PMIFDDHC_00669 7.8e-157 S reductase
PMIFDDHC_00670 5.8e-85 2.3.1.128 K Acetyltransferase (GNAT) domain
PMIFDDHC_00671 9.3e-278 K Putative DNA-binding domain
PMIFDDHC_00672 2.9e-238 pyrP F Permease
PMIFDDHC_00673 4.7e-91 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PMIFDDHC_00674 7.8e-261 emrY EGP Major facilitator Superfamily
PMIFDDHC_00675 4.3e-217 mdtG EGP Major facilitator Superfamily
PMIFDDHC_00676 4e-60 L Resolvase, N terminal domain
PMIFDDHC_00677 8.7e-26 dnaQ 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
PMIFDDHC_00678 2.3e-101 L An automated process has identified a potential problem with this gene model
PMIFDDHC_00679 3.4e-131 infB M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
PMIFDDHC_00680 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
PMIFDDHC_00681 1.7e-29 secG U Preprotein translocase
PMIFDDHC_00682 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PMIFDDHC_00683 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PMIFDDHC_00684 2.7e-58 P ABC transporter
PMIFDDHC_00685 2.7e-283 V ABC-type multidrug transport system, ATPase and permease components
PMIFDDHC_00686 1.2e-247 yifK E Amino acid permease
PMIFDDHC_00687 9.1e-178 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PMIFDDHC_00688 2.2e-90 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PMIFDDHC_00689 0.0 aha1 P E1-E2 ATPase
PMIFDDHC_00690 1.9e-175 F DNA/RNA non-specific endonuclease
PMIFDDHC_00691 2e-160 metQ2 P Belongs to the nlpA lipoprotein family
PMIFDDHC_00692 1e-190 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PMIFDDHC_00693 2e-73 metI P ABC transporter permease
PMIFDDHC_00694 9e-267 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PMIFDDHC_00695 1.9e-261 frdC 1.3.5.4 C FAD binding domain
PMIFDDHC_00696 3.1e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PMIFDDHC_00697 3.5e-252 pepC 3.4.22.40 E Peptidase C1-like family
PMIFDDHC_00698 1.3e-133 hxlA 6.2.1.3 H Aldolase/RraA
PMIFDDHC_00699 2.3e-273 P Sodium:sulfate symporter transmembrane region
PMIFDDHC_00700 1.7e-153 ydjP I Alpha/beta hydrolase family
PMIFDDHC_00701 9.1e-195 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
PMIFDDHC_00702 1.2e-43 citD C Covalent carrier of the coenzyme of citrate lyase
PMIFDDHC_00703 4.1e-167 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
PMIFDDHC_00704 4.9e-290 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
PMIFDDHC_00705 9.3e-72 yeaL S Protein of unknown function (DUF441)
PMIFDDHC_00706 3.5e-21
PMIFDDHC_00707 3.6e-146 cbiQ P cobalt transport
PMIFDDHC_00708 0.0 ykoD P ABC transporter, ATP-binding protein
PMIFDDHC_00709 1.5e-95 S UPF0397 protein
PMIFDDHC_00710 2.9e-66 S Domain of unknown function DUF1828
PMIFDDHC_00711 5.5e-09
PMIFDDHC_00712 1.5e-50
PMIFDDHC_00713 2.6e-177 citR K Putative sugar-binding domain
PMIFDDHC_00714 6.5e-249 yjjP S Putative threonine/serine exporter
PMIFDDHC_00716 5.9e-37 M domain protein
PMIFDDHC_00717 8.2e-85 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PMIFDDHC_00718 6.5e-176 prmA J Ribosomal protein L11 methyltransferase
PMIFDDHC_00719 8.5e-60
PMIFDDHC_00720 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PMIFDDHC_00721 6e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PMIFDDHC_00722 9.8e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
PMIFDDHC_00723 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
PMIFDDHC_00724 9.8e-222 patA 2.6.1.1 E Aminotransferase
PMIFDDHC_00725 2.2e-85 S PFAM Archaeal ATPase
PMIFDDHC_00726 5.7e-84 S PFAM Archaeal ATPase
PMIFDDHC_00727 7.7e-26
PMIFDDHC_00728 3.1e-71 2.5.1.74 H UbiA prenyltransferase family
PMIFDDHC_00729 4.3e-75
PMIFDDHC_00730 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PMIFDDHC_00731 1.3e-168 dnaI L Primosomal protein DnaI
PMIFDDHC_00732 3.3e-250 dnaB L Replication initiation and membrane attachment
PMIFDDHC_00733 3.9e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PMIFDDHC_00734 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PMIFDDHC_00735 2.7e-154 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PMIFDDHC_00736 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PMIFDDHC_00737 3.8e-30
PMIFDDHC_00738 1e-230 steT_1 E amino acid
PMIFDDHC_00739 2.9e-139 puuD S peptidase C26
PMIFDDHC_00740 1.5e-176 S PFAM Archaeal ATPase
PMIFDDHC_00741 6.2e-228 yifK E Amino acid permease
PMIFDDHC_00742 1.4e-232 cycA E Amino acid permease
PMIFDDHC_00743 1.7e-116 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PMIFDDHC_00744 1.4e-83 K FR47-like protein
PMIFDDHC_00745 1.1e-297 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PMIFDDHC_00746 2e-194 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PMIFDDHC_00747 9.7e-166 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PMIFDDHC_00748 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PMIFDDHC_00749 2.6e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PMIFDDHC_00750 1.8e-62 yabR J S1 RNA binding domain
PMIFDDHC_00751 6.8e-60 divIC D Septum formation initiator
PMIFDDHC_00752 2.6e-103 lacS G Transporter
PMIFDDHC_00753 0.0 lacZ 3.2.1.23 G -beta-galactosidase
PMIFDDHC_00754 1.1e-220 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PMIFDDHC_00755 2e-288 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PMIFDDHC_00756 1.2e-196 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
PMIFDDHC_00757 7.3e-175 EGP Sugar (and other) transporter
PMIFDDHC_00758 1.2e-18
PMIFDDHC_00759 2.8e-210
PMIFDDHC_00760 3.5e-136 S SLAP domain
PMIFDDHC_00761 1.3e-117 S SLAP domain
PMIFDDHC_00762 9.1e-106 S Bacteriocin helveticin-J
PMIFDDHC_00763 1.2e-44
PMIFDDHC_00764 3.7e-58 ps115 K Helix-turn-helix XRE-family like proteins
PMIFDDHC_00765 4e-32 E Zn peptidase
PMIFDDHC_00766 3.9e-287 clcA P chloride
PMIFDDHC_00767 6.2e-276 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PMIFDDHC_00768 9.5e-31
PMIFDDHC_00769 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PMIFDDHC_00770 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PMIFDDHC_00771 2.1e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PMIFDDHC_00772 8.4e-146 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PMIFDDHC_00773 3.5e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PMIFDDHC_00774 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PMIFDDHC_00775 2.2e-193 L Transposase and inactivated derivatives, IS30 family
PMIFDDHC_00776 9.5e-245 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PMIFDDHC_00777 3.1e-185 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PMIFDDHC_00778 2.6e-35 yaaA S S4 domain protein YaaA
PMIFDDHC_00779 9e-209 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PMIFDDHC_00780 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PMIFDDHC_00781 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PMIFDDHC_00782 5.5e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
PMIFDDHC_00783 2.7e-75 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PMIFDDHC_00784 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PMIFDDHC_00785 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PMIFDDHC_00786 5.7e-69 rplI J Binds to the 23S rRNA
PMIFDDHC_00787 6.7e-254 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PMIFDDHC_00788 2.3e-165 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
PMIFDDHC_00789 3.7e-168 degV S DegV family
PMIFDDHC_00790 4.2e-135 V ABC transporter transmembrane region
PMIFDDHC_00791 6.7e-167 scrK 2.7.1.2, 2.7.1.4 GK ROK family
PMIFDDHC_00793 1.4e-16
PMIFDDHC_00794 1.6e-227 I Protein of unknown function (DUF2974)
PMIFDDHC_00795 2.7e-118 yhiD S MgtC family
PMIFDDHC_00797 1.4e-18 K Helix-turn-helix XRE-family like proteins
PMIFDDHC_00798 6.9e-64
PMIFDDHC_00799 2.6e-84
PMIFDDHC_00800 1.4e-134 D Ftsk spoiiie family protein
PMIFDDHC_00801 5.1e-145 S Replication initiation factor
PMIFDDHC_00802 3.9e-55
PMIFDDHC_00803 2.3e-26
PMIFDDHC_00804 9.5e-220 L Belongs to the 'phage' integrase family
PMIFDDHC_00806 2.5e-62 yfiL V ABC transporter
PMIFDDHC_00807 2.9e-46 V Transport permease protein
PMIFDDHC_00808 3.4e-09
PMIFDDHC_00809 1.1e-68 sagB C Nitroreductase family
PMIFDDHC_00810 5.1e-56
PMIFDDHC_00811 1.8e-131 sagD S YcaO cyclodehydratase, ATP-ad Mg2+-binding
PMIFDDHC_00813 7.6e-25 S SLAP domain
PMIFDDHC_00814 4.3e-24 S SLAP domain
PMIFDDHC_00815 8.8e-29
PMIFDDHC_00818 4.9e-111 K Helix-turn-helix XRE-family like proteins
PMIFDDHC_00819 2.5e-75 K Helix-turn-helix domain
PMIFDDHC_00820 1.5e-25 S CAAX protease self-immunity
PMIFDDHC_00821 1.4e-22 S CAAX protease self-immunity
PMIFDDHC_00822 7.6e-26 WQ51_00220 K Helix-turn-helix XRE-family like proteins
PMIFDDHC_00824 6.1e-96 ybaT E Amino acid permease
PMIFDDHC_00825 6.5e-07 S LPXTG cell wall anchor motif
PMIFDDHC_00826 9.7e-65 yagE E amino acid
PMIFDDHC_00827 8.4e-128 yagE E Amino acid permease
PMIFDDHC_00828 4.3e-86 3.4.21.96 S SLAP domain
PMIFDDHC_00829 5e-104 L Belongs to the 'phage' integrase family
PMIFDDHC_00832 3.2e-50 S Short C-terminal domain
PMIFDDHC_00833 1.7e-68 3.4.21.88 K Peptidase S24-like
PMIFDDHC_00834 2.3e-10 K Helix-turn-helix XRE-family like proteins
PMIFDDHC_00842 5.5e-30 L Psort location Cytoplasmic, score
PMIFDDHC_00848 2.2e-10
PMIFDDHC_00853 1.3e-247 lctP C L-lactate permease
PMIFDDHC_00854 1.7e-28 mloB K Putative ATP-dependent DNA helicase recG C-terminal
PMIFDDHC_00856 3.9e-201 XK27_00915 C Luciferase-like monooxygenase
PMIFDDHC_00857 6.5e-87 K GNAT family
PMIFDDHC_00858 2.8e-19 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
PMIFDDHC_00859 9.1e-54 papP P ABC transporter, permease protein
PMIFDDHC_00860 5.3e-116 P ABC transporter permease
PMIFDDHC_00861 1.5e-127 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PMIFDDHC_00862 1e-156 cjaA ET ABC transporter substrate-binding protein
PMIFDDHC_00863 7.1e-200 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PMIFDDHC_00864 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PMIFDDHC_00865 2e-61 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PMIFDDHC_00866 4.3e-169 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
PMIFDDHC_00867 1.9e-158 metQ1 P Belongs to the nlpA lipoprotein family
PMIFDDHC_00868 1.9e-25
PMIFDDHC_00869 0.0 mco Q Multicopper oxidase
PMIFDDHC_00871 3.2e-139 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PMIFDDHC_00872 8.7e-86 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
PMIFDDHC_00873 4.5e-227 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
PMIFDDHC_00874 2.8e-79 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PMIFDDHC_00875 4e-89 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PMIFDDHC_00876 2.4e-10 L Psort location Cytoplasmic, score
PMIFDDHC_00877 1.4e-94
PMIFDDHC_00878 3e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
PMIFDDHC_00879 9e-98
PMIFDDHC_00880 2.4e-107 K LysR substrate binding domain
PMIFDDHC_00881 1e-20
PMIFDDHC_00882 2.3e-215 S Sterol carrier protein domain
PMIFDDHC_00883 9.2e-95 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
PMIFDDHC_00884 2e-105 argF 2.1.3.3, 2.7.2.2 E Belongs to the carbamate kinase family
PMIFDDHC_00885 4.3e-66 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PMIFDDHC_00886 8.8e-234 arcA 3.5.3.6 E Arginine
PMIFDDHC_00887 9e-137 lysR5 K LysR substrate binding domain
PMIFDDHC_00888 0.0 mgtA 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
PMIFDDHC_00889 1e-48 S Metal binding domain of Ada
PMIFDDHC_00890 1.8e-163
PMIFDDHC_00891 7.8e-26 K Acetyltransferase (GNAT) domain
PMIFDDHC_00893 0.0 ydgH S MMPL family
PMIFDDHC_00894 6.6e-99 yobS K Bacterial regulatory proteins, tetR family
PMIFDDHC_00895 3.3e-148 3.5.2.6 V Beta-lactamase enzyme family
PMIFDDHC_00896 1.8e-154 corA P CorA-like Mg2+ transporter protein
PMIFDDHC_00897 2.3e-240 G Bacterial extracellular solute-binding protein
PMIFDDHC_00898 9.2e-258 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
PMIFDDHC_00899 6.1e-146 gtsC P Binding-protein-dependent transport system inner membrane component
PMIFDDHC_00900 1.6e-157 gtsB P ABC-type sugar transport systems, permease components
PMIFDDHC_00901 1.9e-203 malK P ATPases associated with a variety of cellular activities
PMIFDDHC_00902 1.3e-281 pipD E Dipeptidase
PMIFDDHC_00903 1.9e-158 endA F DNA RNA non-specific endonuclease
PMIFDDHC_00904 8e-182 dnaQ 2.7.7.7 L EXOIII
PMIFDDHC_00905 9e-158 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
PMIFDDHC_00906 3e-116 yviA S Protein of unknown function (DUF421)
PMIFDDHC_00907 1.1e-56 S Protein of unknown function (DUF3290)
PMIFDDHC_00908 3.6e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PMIFDDHC_00909 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PMIFDDHC_00910 2.5e-286 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
PMIFDDHC_00911 1.7e-34
PMIFDDHC_00912 1.2e-94 sigH K Belongs to the sigma-70 factor family
PMIFDDHC_00913 1.7e-139 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PMIFDDHC_00914 5.1e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PMIFDDHC_00915 7.5e-277 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PMIFDDHC_00916 1.6e-290 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PMIFDDHC_00917 2.7e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PMIFDDHC_00918 1.8e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
PMIFDDHC_00919 4.1e-52
PMIFDDHC_00920 1e-267 pepC 3.4.22.40 E Peptidase C1-like family
PMIFDDHC_00921 7.3e-44
PMIFDDHC_00922 2.4e-183 S AAA domain
PMIFDDHC_00923 1.7e-125 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PMIFDDHC_00924 1.4e-23
PMIFDDHC_00925 6.6e-162 czcD P cation diffusion facilitator family transporter
PMIFDDHC_00926 2.2e-125 gpmB G Belongs to the phosphoglycerate mutase family
PMIFDDHC_00927 1.1e-133 S membrane transporter protein
PMIFDDHC_00928 7.3e-118 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PMIFDDHC_00929 6.3e-105 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
PMIFDDHC_00930 1.2e-49 S Protein of unknown function (DUF3021)
PMIFDDHC_00931 2.8e-65 K LytTr DNA-binding domain
PMIFDDHC_00932 1.2e-10
PMIFDDHC_00933 2.6e-56 K Acetyltransferase (GNAT) domain
PMIFDDHC_00934 1.9e-12 L Transposase
PMIFDDHC_00935 1.4e-16 L Transposase
PMIFDDHC_00936 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
PMIFDDHC_00937 5.2e-68 L haloacid dehalogenase-like hydrolase
PMIFDDHC_00938 4.9e-123 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
PMIFDDHC_00939 7.2e-129 ulaE 5.1.3.22 G Xylose isomerase-like TIM barrel
PMIFDDHC_00940 2.8e-90 ulaD 4.1.1.85, 4.1.2.43 G Orotidine 5'-phosphate decarboxylase / HUMPS family
PMIFDDHC_00941 4.1e-31 sgaB 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
PMIFDDHC_00942 5.3e-233 ulaA S PTS system sugar-specific permease component
PMIFDDHC_00943 1.5e-61 cmtB 2.7.1.194, 2.7.1.197, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PMIFDDHC_00944 8.1e-175 ulaG S Beta-lactamase superfamily domain
PMIFDDHC_00945 1.5e-77 S helix_turn_helix, Deoxyribose operon repressor
PMIFDDHC_00946 3.3e-140 repB EP Plasmid replication protein
PMIFDDHC_00947 1.2e-145 V ABC transporter, ATP-binding protein
PMIFDDHC_00948 4.2e-144 V ABC transporter, ATP-binding protein
PMIFDDHC_00949 0.0 V ABC transporter
PMIFDDHC_00951 9.6e-121 K response regulator
PMIFDDHC_00952 6.6e-207 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
PMIFDDHC_00953 5.5e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PMIFDDHC_00954 8e-145 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PMIFDDHC_00955 1.4e-53 S Enterocin A Immunity
PMIFDDHC_00956 2.5e-33
PMIFDDHC_00957 9.5e-26
PMIFDDHC_00958 1e-24
PMIFDDHC_00959 3e-270 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
PMIFDDHC_00960 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PMIFDDHC_00961 2.1e-255 S Archaea bacterial proteins of unknown function
PMIFDDHC_00962 1.2e-16
PMIFDDHC_00963 4.4e-138 2.7.13.3 T GHKL domain
PMIFDDHC_00964 1.2e-127 K LytTr DNA-binding domain
PMIFDDHC_00965 6.1e-269 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PMIFDDHC_00966 3.3e-37
PMIFDDHC_00967 2.5e-119 K helix_turn_helix, mercury resistance
PMIFDDHC_00968 7.5e-231 pbuG S permease
PMIFDDHC_00969 2.5e-40 relB L Addiction module antitoxin, RelB DinJ family
PMIFDDHC_00970 2.4e-16 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
PMIFDDHC_00971 1.8e-48 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
PMIFDDHC_00972 3.9e-94 K Transcriptional regulator
PMIFDDHC_00973 6.1e-61 K Transcriptional regulator
PMIFDDHC_00974 2.9e-224 S cog cog1373
PMIFDDHC_00975 4.8e-145 S haloacid dehalogenase-like hydrolase
PMIFDDHC_00976 2.5e-226 pbuG S permease
PMIFDDHC_00979 1.9e-156 S Type III restriction enzyme, res subunit
PMIFDDHC_00980 2.4e-169 S Domain of unknown function (DUF3440)
PMIFDDHC_00981 1.2e-89 S N-methyltransferase activity
PMIFDDHC_00983 5.7e-166 psaA P Belongs to the bacterial solute-binding protein 9 family
PMIFDDHC_00986 1.6e-219 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PMIFDDHC_00987 1.5e-259 qacA EGP Major facilitator Superfamily
PMIFDDHC_00988 0.0 sacX 2.7.1.208, 2.7.1.211 G phosphotransferase system
PMIFDDHC_00989 1.3e-141 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PMIFDDHC_00990 1.4e-183 yfeW 3.4.16.4 V Beta-lactamase
PMIFDDHC_00991 3.1e-187 S Bacterial protein of unknown function (DUF871)
PMIFDDHC_00992 4.5e-144 ybbH_2 K rpiR family
PMIFDDHC_00993 5.9e-300 L Transposase
PMIFDDHC_00994 7e-23 cydA 1.10.3.14 C ubiquinol oxidase
PMIFDDHC_00995 1e-188 lacS G Transporter
PMIFDDHC_00996 5.4e-165 lacR K Transcriptional regulator
PMIFDDHC_00997 7.2e-221 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PMIFDDHC_00998 9.3e-80 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
PMIFDDHC_00999 2.1e-142 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
PMIFDDHC_01000 5.3e-189 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PMIFDDHC_01001 7.6e-163 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
PMIFDDHC_01002 2e-106 K Transcriptional regulator, AbiEi antitoxin
PMIFDDHC_01003 1.2e-188 K Periplasmic binding protein-like domain
PMIFDDHC_01004 9.7e-83 S An automated process has identified a potential problem with this gene model
PMIFDDHC_01005 1e-137 S Protein of unknown function (DUF3100)
PMIFDDHC_01006 2.7e-246 3.5.1.47 S Peptidase dimerisation domain
PMIFDDHC_01007 8.4e-229 Q Imidazolonepropionase and related amidohydrolases
PMIFDDHC_01008 0.0 oppA E ABC transporter
PMIFDDHC_01009 1.2e-151 S Sucrose-6F-phosphate phosphohydrolase
PMIFDDHC_01010 1.4e-69 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PMIFDDHC_01011 5.1e-226 N Uncharacterized conserved protein (DUF2075)
PMIFDDHC_01012 1.5e-203 pbpX1 V Beta-lactamase
PMIFDDHC_01013 0.0 L Helicase C-terminal domain protein
PMIFDDHC_01014 1.3e-273 E amino acid
PMIFDDHC_01015 1.8e-158 xth 3.1.11.2 L exodeoxyribonuclease III
PMIFDDHC_01018 1.4e-192 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMIFDDHC_01019 2.2e-133 EGP Major facilitator Superfamily
PMIFDDHC_01020 4e-150 3.1.3.102, 3.1.3.104 S haloacid dehalogenase-like hydrolase
PMIFDDHC_01021 0.0 tetP J elongation factor G
PMIFDDHC_01022 1.2e-51 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
PMIFDDHC_01023 6.4e-113 S SLAP domain
PMIFDDHC_01024 8.4e-89
PMIFDDHC_01025 3e-09 isdH M Iron Transport-associated domain
PMIFDDHC_01026 6.3e-123 M Iron Transport-associated domain
PMIFDDHC_01027 8.7e-159 isdE P Periplasmic binding protein
PMIFDDHC_01028 9.5e-148 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PMIFDDHC_01029 6.7e-139 fhuC 3.6.3.34 HP abc transporter atp-binding protein
PMIFDDHC_01030 6.7e-44 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PMIFDDHC_01031 3.4e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
PMIFDDHC_01032 1.3e-38 S RelB antitoxin
PMIFDDHC_01033 5.2e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
PMIFDDHC_01034 0.0 S membrane
PMIFDDHC_01035 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
PMIFDDHC_01036 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PMIFDDHC_01037 2.1e-97 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PMIFDDHC_01038 3.1e-119 gluP 3.4.21.105 S Rhomboid family
PMIFDDHC_01039 9.7e-36 yqgQ S Bacterial protein of unknown function (DUF910)
PMIFDDHC_01040 1.5e-65 yqhL P Rhodanese-like protein
PMIFDDHC_01041 1.1e-167 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PMIFDDHC_01042 2.9e-224 ynbB 4.4.1.1 P aluminum resistance
PMIFDDHC_01043 2e-263 glnA 6.3.1.2 E glutamine synthetase
PMIFDDHC_01044 1.5e-169
PMIFDDHC_01045 1.7e-147
PMIFDDHC_01047 2.4e-13 hicA S HicA toxin of bacterial toxin-antitoxin,
PMIFDDHC_01048 3.1e-32 S protein encoded in hypervariable junctions of pilus gene clusters
PMIFDDHC_01050 8.9e-33
PMIFDDHC_01051 1.1e-212 tnpB L Putative transposase DNA-binding domain
PMIFDDHC_01052 1.6e-160 S interspecies interaction between organisms
PMIFDDHC_01054 1.9e-263 E ABC transporter, substratebinding protein
PMIFDDHC_01056 2.4e-36 L An automated process has identified a potential problem with this gene model
PMIFDDHC_01057 7.2e-50 L An automated process has identified a potential problem with this gene model
PMIFDDHC_01058 1.3e-252 E Amino acid permease
PMIFDDHC_01059 2.9e-201 L COG2826 Transposase and inactivated derivatives, IS30 family
PMIFDDHC_01060 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PMIFDDHC_01061 1.4e-62
PMIFDDHC_01062 1.5e-258 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
PMIFDDHC_01063 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PMIFDDHC_01064 1.2e-86 lacI3 K helix_turn _helix lactose operon repressor
PMIFDDHC_01065 2.3e-65 S Alpha beta hydrolase
PMIFDDHC_01066 1.1e-36 S Alpha beta hydrolase
PMIFDDHC_01067 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
PMIFDDHC_01068 2.8e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PMIFDDHC_01069 7.1e-46
PMIFDDHC_01070 3.1e-148 glcU U sugar transport
PMIFDDHC_01071 2.2e-250 lctP C L-lactate permease
PMIFDDHC_01072 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
PMIFDDHC_01073 1.6e-210 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PMIFDDHC_01074 4e-245 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PMIFDDHC_01075 3.6e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PMIFDDHC_01076 4.2e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PMIFDDHC_01077 2.4e-167 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PMIFDDHC_01078 7.8e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PMIFDDHC_01079 1.9e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PMIFDDHC_01080 1.9e-75 M LysM domain
PMIFDDHC_01081 1.3e-42
PMIFDDHC_01083 3.5e-29
PMIFDDHC_01084 4.5e-76 yniG EGP Major facilitator Superfamily
PMIFDDHC_01085 5.4e-237 L transposase, IS605 OrfB family
PMIFDDHC_01086 1.4e-109 yniG EGP Major facilitator Superfamily
PMIFDDHC_01087 2.4e-128 S cog cog1373
PMIFDDHC_01088 2e-75 S cog cog0433
PMIFDDHC_01089 1.9e-110 F DNA/RNA non-specific endonuclease
PMIFDDHC_01090 2.7e-34 S YSIRK type signal peptide
PMIFDDHC_01092 5.5e-53
PMIFDDHC_01093 1.8e-285 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
PMIFDDHC_01094 8e-79 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PMIFDDHC_01095 4.3e-169 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PMIFDDHC_01096 1e-198 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PMIFDDHC_01097 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
PMIFDDHC_01098 0.0 FbpA K Fibronectin-binding protein
PMIFDDHC_01099 1.1e-66
PMIFDDHC_01100 1.3e-159 degV S EDD domain protein, DegV family
PMIFDDHC_01101 1.2e-281 phoR 2.7.13.3 T Histidine kinase
PMIFDDHC_01102 9.5e-121 T Transcriptional regulatory protein, C terminal
PMIFDDHC_01103 1.4e-105 phoU P Plays a role in the regulation of phosphate uptake
PMIFDDHC_01104 1.3e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PMIFDDHC_01105 1.2e-152 pstA P Phosphate transport system permease protein PstA
PMIFDDHC_01106 1.1e-159 pstC P probably responsible for the translocation of the substrate across the membrane
PMIFDDHC_01107 4.2e-145 pstS P Phosphate
PMIFDDHC_01108 1.3e-30
PMIFDDHC_01109 4.5e-116 oppA E ABC transporter, substratebinding protein
PMIFDDHC_01110 2.2e-50 oppA E ABC transporter, substratebinding protein
PMIFDDHC_01111 4.7e-275 ytgP S Polysaccharide biosynthesis protein
PMIFDDHC_01112 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PMIFDDHC_01113 1.1e-121 3.6.1.27 I Acid phosphatase homologues
PMIFDDHC_01114 1.3e-168 K LysR substrate binding domain
PMIFDDHC_01116 4.4e-84 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PMIFDDHC_01118 1.4e-42 1.3.5.4 C FAD binding domain
PMIFDDHC_01119 1.1e-231 ndh 1.6.99.3 C NADH dehydrogenase
PMIFDDHC_01120 2.5e-161 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
PMIFDDHC_01121 8e-177 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PMIFDDHC_01122 6.3e-128 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PMIFDDHC_01123 6e-268 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
PMIFDDHC_01124 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
PMIFDDHC_01125 1.1e-176 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
PMIFDDHC_01126 2.2e-243 cydA 1.10.3.14 C ubiquinol oxidase
PMIFDDHC_01127 7.3e-74
PMIFDDHC_01128 0.0 kup P Transport of potassium into the cell
PMIFDDHC_01129 0.0 pepO 3.4.24.71 O Peptidase family M13
PMIFDDHC_01130 4.7e-211 yttB EGP Major facilitator Superfamily
PMIFDDHC_01131 1.5e-230 XK27_04775 S PAS domain
PMIFDDHC_01132 6.2e-103 S Iron-sulfur cluster assembly protein
PMIFDDHC_01133 8.7e-141 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PMIFDDHC_01134 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
PMIFDDHC_01135 5.6e-255 yxbA 6.3.1.12 S ATP-grasp enzyme
PMIFDDHC_01136 0.0 asnB 6.3.5.4 E Asparagine synthase
PMIFDDHC_01137 1.6e-271 S Calcineurin-like phosphoesterase
PMIFDDHC_01138 3.9e-84
PMIFDDHC_01139 3.3e-106 tag 3.2.2.20 L glycosylase
PMIFDDHC_01140 2.2e-148 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PMIFDDHC_01141 1.2e-111 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
PMIFDDHC_01142 7e-136 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
PMIFDDHC_01143 1.2e-150 phnD P Phosphonate ABC transporter
PMIFDDHC_01144 5.2e-84 uspA T universal stress protein
PMIFDDHC_01145 3.4e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
PMIFDDHC_01146 3.9e-87 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PMIFDDHC_01147 3.6e-90 ntd 2.4.2.6 F Nucleoside
PMIFDDHC_01149 1.5e-274 S Archaea bacterial proteins of unknown function
PMIFDDHC_01150 1.3e-26
PMIFDDHC_01151 8e-22 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
PMIFDDHC_01152 5.4e-53 hipB K sequence-specific DNA binding
PMIFDDHC_01153 4.8e-42 S SnoaL-like domain
PMIFDDHC_01154 0.0 L PLD-like domain
PMIFDDHC_01155 9.6e-103 pgm3 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
PMIFDDHC_01156 8.8e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
PMIFDDHC_01157 1.7e-279 thrC 4.2.3.1 E Threonine synthase
PMIFDDHC_01158 6.6e-221 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
PMIFDDHC_01159 2.8e-157 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PMIFDDHC_01160 8.9e-116
PMIFDDHC_01161 4.6e-160 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PMIFDDHC_01163 1.8e-104 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PMIFDDHC_01164 2.2e-116 S Peptidase family M23
PMIFDDHC_01166 6.2e-59 psiE S Phosphate-starvation-inducible E
PMIFDDHC_01167 6.5e-113 yncA 2.3.1.79 S Maltose acetyltransferase
PMIFDDHC_01168 2.9e-69 S Iron-sulphur cluster biosynthesis
PMIFDDHC_01170 2.3e-30
PMIFDDHC_01171 2.3e-172 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
PMIFDDHC_01172 6.2e-12
PMIFDDHC_01173 1.8e-125 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMIFDDHC_01174 8.1e-86 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMIFDDHC_01175 9.2e-76 M LysM domain protein
PMIFDDHC_01176 1.7e-164 D nuclear chromosome segregation
PMIFDDHC_01177 1.2e-105 G Phosphoglycerate mutase family
PMIFDDHC_01178 5.7e-89 G Histidine phosphatase superfamily (branch 1)
PMIFDDHC_01179 6.6e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
PMIFDDHC_01180 1.2e-115 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PMIFDDHC_01182 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PMIFDDHC_01184 5.5e-209 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
PMIFDDHC_01185 2.2e-182 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
PMIFDDHC_01186 1.8e-119 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
PMIFDDHC_01187 5.4e-142 K SIS domain
PMIFDDHC_01188 7.4e-227 slpX S SLAP domain
PMIFDDHC_01189 1.3e-22 3.6.4.12 S transposase or invertase
PMIFDDHC_01190 7.7e-12
PMIFDDHC_01191 1.1e-240 npr 1.11.1.1 C NADH oxidase
PMIFDDHC_01194 1.6e-299 oppA2 E ABC transporter, substratebinding protein
PMIFDDHC_01195 2.5e-179
PMIFDDHC_01196 1.3e-122 gntR1 K UTRA
PMIFDDHC_01197 1.5e-70 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
PMIFDDHC_01198 2.8e-134 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PMIFDDHC_01199 5e-204 csaB M Glycosyl transferases group 1
PMIFDDHC_01200 2.7e-285 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PMIFDDHC_01201 4e-153 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PMIFDDHC_01202 5.2e-204 tnpB L Putative transposase DNA-binding domain
PMIFDDHC_01203 0.0 pacL 3.6.3.8 P P-type ATPase
PMIFDDHC_01204 7e-225 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PMIFDDHC_01205 1.1e-259 epsU S Polysaccharide biosynthesis protein
PMIFDDHC_01206 7.7e-134 M Glycosyltransferase sugar-binding region containing DXD motif
PMIFDDHC_01207 4.1e-83 ydcK S Belongs to the SprT family
PMIFDDHC_01209 5.2e-84 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
PMIFDDHC_01210 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PMIFDDHC_01211 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PMIFDDHC_01212 5.8e-203 camS S sex pheromone
PMIFDDHC_01213 1.5e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PMIFDDHC_01214 5.2e-270 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PMIFDDHC_01215 2e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PMIFDDHC_01216 7.2e-172 yegS 2.7.1.107 G Lipid kinase
PMIFDDHC_01217 7.2e-18
PMIFDDHC_01218 2.9e-66 K transcriptional regulator
PMIFDDHC_01219 1.2e-105 ybhL S Belongs to the BI1 family
PMIFDDHC_01220 4.5e-50
PMIFDDHC_01221 1.3e-230 nhaC C Na H antiporter NhaC
PMIFDDHC_01222 1.6e-199 pbpX V Beta-lactamase
PMIFDDHC_01223 5.8e-255 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PMIFDDHC_01224 1.1e-94 MA20_25245 K Acetyltransferase (GNAT) domain
PMIFDDHC_01229 9.5e-259 emrY EGP Major facilitator Superfamily
PMIFDDHC_01230 2.3e-90 yxdD K Bacterial regulatory proteins, tetR family
PMIFDDHC_01231 0.0 4.2.1.53 S Myosin-crossreactive antigen
PMIFDDHC_01232 2.8e-34 S Domain of unknown function (DUF4417)
PMIFDDHC_01233 1.3e-19
PMIFDDHC_01234 2.5e-20
PMIFDDHC_01235 1.1e-14 K Helix-turn-helix XRE-family like proteins
PMIFDDHC_01236 3.1e-26 E Zn peptidase
PMIFDDHC_01237 1.4e-200 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
PMIFDDHC_01238 1.9e-65 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
PMIFDDHC_01239 7.5e-214 yubA S AI-2E family transporter
PMIFDDHC_01240 4.2e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PMIFDDHC_01241 1.7e-69 WQ51_03320 S Protein of unknown function (DUF1149)
PMIFDDHC_01242 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PMIFDDHC_01243 2.6e-222 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
PMIFDDHC_01244 1.8e-234 S Peptidase M16
PMIFDDHC_01245 2.3e-133 IQ Enoyl-(Acyl carrier protein) reductase
PMIFDDHC_01246 2e-96 ymfM S Helix-turn-helix domain
PMIFDDHC_01247 1.1e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PMIFDDHC_01248 4.2e-195 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PMIFDDHC_01249 7.4e-220 rny S Endoribonuclease that initiates mRNA decay
PMIFDDHC_01250 1.3e-210 tagO 2.7.8.33, 2.7.8.35 M transferase
PMIFDDHC_01251 2.5e-118 yvyE 3.4.13.9 S YigZ family
PMIFDDHC_01252 5.2e-245 comFA L Helicase C-terminal domain protein
PMIFDDHC_01253 2.9e-133 comFC S Competence protein
PMIFDDHC_01254 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PMIFDDHC_01255 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PMIFDDHC_01256 4.6e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PMIFDDHC_01257 5.1e-17
PMIFDDHC_01258 5.8e-180 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PMIFDDHC_01259 3.2e-158 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PMIFDDHC_01260 1.1e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PMIFDDHC_01261 3.9e-181 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PMIFDDHC_01262 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
PMIFDDHC_01263 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PMIFDDHC_01264 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PMIFDDHC_01265 1.1e-90 S Short repeat of unknown function (DUF308)
PMIFDDHC_01266 6.2e-165 rapZ S Displays ATPase and GTPase activities
PMIFDDHC_01267 4.3e-47 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PMIFDDHC_01268 8.9e-130 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PMIFDDHC_01269 2.1e-171 whiA K May be required for sporulation
PMIFDDHC_01270 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PMIFDDHC_01271 0.0 S SH3-like domain
PMIFDDHC_01272 2e-35
PMIFDDHC_01274 3.8e-104 pncA Q Isochorismatase family
PMIFDDHC_01275 4.9e-118
PMIFDDHC_01278 3.6e-63
PMIFDDHC_01279 2.5e-26
PMIFDDHC_01280 2.9e-277 V ABC transporter transmembrane region
PMIFDDHC_01281 2.1e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
PMIFDDHC_01282 3.1e-130 T Transcriptional regulatory protein, C terminal
PMIFDDHC_01283 5.2e-187 T GHKL domain
PMIFDDHC_01284 3.4e-76 S Peptidase propeptide and YPEB domain
PMIFDDHC_01285 2.5e-72 S Peptidase propeptide and YPEB domain
PMIFDDHC_01286 4.7e-83 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
PMIFDDHC_01287 3.8e-65 yybA 2.3.1.57 K Transcriptional regulator
PMIFDDHC_01288 7e-68 V ABC transporter transmembrane region
PMIFDDHC_01289 9e-161 V ABC transporter transmembrane region
PMIFDDHC_01290 2.3e-309 oppA3 E ABC transporter, substratebinding protein
PMIFDDHC_01291 2.4e-60 ypaA S Protein of unknown function (DUF1304)
PMIFDDHC_01292 2.1e-28 S Peptidase propeptide and YPEB domain
PMIFDDHC_01293 7.1e-237 L transposase, IS605 OrfB family
PMIFDDHC_01294 0.0 UW LPXTG-motif cell wall anchor domain protein
PMIFDDHC_01295 3.3e-45 UW LPXTG-motif cell wall anchor domain protein
PMIFDDHC_01296 9.1e-10 UW LPXTG-motif cell wall anchor domain protein
PMIFDDHC_01297 1.3e-248 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PMIFDDHC_01298 7.5e-100 J Acetyltransferase (GNAT) domain
PMIFDDHC_01299 1.4e-110 yjbF S SNARE associated Golgi protein
PMIFDDHC_01300 2.7e-151 I alpha/beta hydrolase fold
PMIFDDHC_01301 5.2e-156 hipB K Helix-turn-helix
PMIFDDHC_01302 1.4e-15 S cog cog1373
PMIFDDHC_01303 1e-30 S cog cog1373
PMIFDDHC_01304 7.6e-91 F Nucleoside 2-deoxyribosyltransferase
PMIFDDHC_01305 3.3e-261 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
PMIFDDHC_01306 2.3e-44 XK27_09445 S Domain of unknown function (DUF1827)
PMIFDDHC_01307 9.4e-305 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
PMIFDDHC_01308 1.4e-140 hlyX S Transporter associated domain
PMIFDDHC_01309 2.7e-74
PMIFDDHC_01310 1.6e-85
PMIFDDHC_01311 1.5e-144 recX 2.4.1.337 GT4 S Regulatory protein RecX
PMIFDDHC_01312 4.6e-263 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PMIFDDHC_01313 1.4e-118 D Alpha beta
PMIFDDHC_01314 1.8e-38 D Alpha beta
PMIFDDHC_01315 9.4e-46
PMIFDDHC_01316 1.7e-270 L Transposase
PMIFDDHC_01317 3.6e-215 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
PMIFDDHC_01318 2.5e-214 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
PMIFDDHC_01319 2.1e-168 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PMIFDDHC_01320 3.6e-163 yihY S Belongs to the UPF0761 family
PMIFDDHC_01321 1.4e-163 map 3.4.11.18 E Methionine Aminopeptidase
PMIFDDHC_01322 7.8e-52 V ABC-type multidrug transport system, ATPase and permease components
PMIFDDHC_01323 8.9e-276 V ABC-type multidrug transport system, ATPase and permease components
PMIFDDHC_01324 3.2e-10 S Domain of unknown function DUF87
PMIFDDHC_01325 1.2e-63 S SIR2-like domain
PMIFDDHC_01326 4.4e-99 3.1.21.3 V Type I restriction modification DNA specificity domain
PMIFDDHC_01327 1.9e-259 hsdM 2.1.1.72 V type I restriction-modification system
PMIFDDHC_01328 3.4e-42 S RloB-like protein
PMIFDDHC_01329 1.2e-164 S AAA domain, putative AbiEii toxin, Type IV TA system
PMIFDDHC_01330 0.0 hsdR 3.1.21.3 L DEAD/DEAH box helicase
PMIFDDHC_01331 0.0 S SLAP domain
PMIFDDHC_01332 2.7e-235 XK27_01810 S Calcineurin-like phosphoesterase
PMIFDDHC_01333 2.3e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
PMIFDDHC_01334 5e-240 G Bacterial extracellular solute-binding protein
PMIFDDHC_01335 6.3e-17
PMIFDDHC_01336 6.5e-288 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
PMIFDDHC_01337 8.9e-101 treR K UTRA
PMIFDDHC_01338 1.5e-283 treB G phosphotransferase system
PMIFDDHC_01339 1.7e-64 spxA_2 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PMIFDDHC_01340 1.2e-190 yrvN L AAA C-terminal domain
PMIFDDHC_01341 2.2e-251 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PMIFDDHC_01342 4e-83 K Acetyltransferase (GNAT) domain
PMIFDDHC_01343 5.8e-230 S Putative peptidoglycan binding domain
PMIFDDHC_01344 7.5e-95 S ECF-type riboflavin transporter, S component
PMIFDDHC_01345 2.8e-98 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PMIFDDHC_01346 9.3e-204 pbpX1 V Beta-lactamase
PMIFDDHC_01347 4.6e-114 lacA 2.3.1.79 S Transferase hexapeptide repeat
PMIFDDHC_01348 1.9e-80 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PMIFDDHC_01349 6.8e-113 3.6.1.27 I Acid phosphatase homologues
PMIFDDHC_01350 5.2e-101 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PMIFDDHC_01351 1.9e-71 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PMIFDDHC_01352 0.0 uvrA3 L excinuclease ABC, A subunit
PMIFDDHC_01353 4.9e-208 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PMIFDDHC_01354 6.5e-125 S Protein of unknown function (DUF554)
PMIFDDHC_01355 8.2e-61
PMIFDDHC_01356 5.6e-19
PMIFDDHC_01357 2.2e-102 rimL J Acetyltransferase (GNAT) domain
PMIFDDHC_01358 8.3e-58
PMIFDDHC_01359 8.9e-292 S ABC transporter
PMIFDDHC_01360 2.4e-136 thrE S Putative threonine/serine exporter
PMIFDDHC_01361 1.1e-83 S Threonine/Serine exporter, ThrE
PMIFDDHC_01362 9.1e-112 yvpB S Peptidase_C39 like family
PMIFDDHC_01363 2.5e-68
PMIFDDHC_01364 9.9e-177 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PMIFDDHC_01365 5.5e-77 nrdI F NrdI Flavodoxin like
PMIFDDHC_01366 4.7e-221 tnpB L Putative transposase DNA-binding domain
PMIFDDHC_01367 3.3e-112
PMIFDDHC_01368 2.9e-279 S O-antigen ligase like membrane protein
PMIFDDHC_01369 3.9e-42
PMIFDDHC_01370 2.2e-88 gmk2 2.7.4.8 F Guanylate kinase homologues.
PMIFDDHC_01371 5e-88 M NlpC/P60 family
PMIFDDHC_01372 1.4e-136 M NlpC P60 family protein
PMIFDDHC_01373 2.6e-118 M NlpC/P60 family
PMIFDDHC_01374 1.6e-41
PMIFDDHC_01375 3.5e-175 S Cysteine-rich secretory protein family
PMIFDDHC_01376 3.8e-216 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PMIFDDHC_01378 1.9e-176 brpA K Cell envelope-like function transcriptional attenuator common domain protein
PMIFDDHC_01379 6.5e-146 epsB M biosynthesis protein
PMIFDDHC_01380 1.3e-121 ywqD 2.7.10.1 D Capsular exopolysaccharide family
PMIFDDHC_01381 1.4e-144 ywqE 3.1.3.48 GM PHP domain protein
PMIFDDHC_01383 1e-72 L Transposase
PMIFDDHC_01384 6.5e-85 L Transposase
PMIFDDHC_01385 1.1e-08 S CAAX amino terminal protease
PMIFDDHC_01386 6.1e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PMIFDDHC_01387 1.4e-214 2.1.1.14 E methionine synthase, vitamin-B12 independent
PMIFDDHC_01388 8e-10
PMIFDDHC_01389 2.4e-27 K Helix-turn-helix XRE-family like proteins
PMIFDDHC_01391 3.2e-11
PMIFDDHC_01392 8.7e-60 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
PMIFDDHC_01393 1.6e-55 celA1 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
PMIFDDHC_01394 3.7e-128 K UTRA domain
PMIFDDHC_01395 5.8e-293 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PMIFDDHC_01396 6.4e-90 alkD L DNA alkylation repair enzyme
PMIFDDHC_01397 5.4e-175 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
PMIFDDHC_01398 3.9e-82
PMIFDDHC_01399 3.6e-39 C FMN_bind
PMIFDDHC_01400 4.6e-299 I Protein of unknown function (DUF2974)
PMIFDDHC_01401 2.9e-159 pbpX1 V Beta-lactamase
PMIFDDHC_01402 2.3e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PMIFDDHC_01403 3.2e-217 aspC 2.6.1.1 E Aminotransferase
PMIFDDHC_01404 7e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PMIFDDHC_01405 9.8e-177 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PMIFDDHC_01406 5.2e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PMIFDDHC_01407 2.8e-75 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PMIFDDHC_01408 1.3e-246 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PMIFDDHC_01409 1.3e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
PMIFDDHC_01410 2.3e-192 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PMIFDDHC_01411 3.4e-175 yjeM E Amino Acid
PMIFDDHC_01412 7.8e-39 yjeM E Amino Acid
PMIFDDHC_01413 1.4e-104 engB D Necessary for normal cell division and for the maintenance of normal septation
PMIFDDHC_01414 2e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PMIFDDHC_01415 4e-216 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PMIFDDHC_01416 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PMIFDDHC_01417 1.3e-148
PMIFDDHC_01418 3e-310 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PMIFDDHC_01419 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PMIFDDHC_01420 2.6e-34 rpsT J Binds directly to 16S ribosomal RNA
PMIFDDHC_01421 2.6e-175 holA 2.7.7.7 L DNA polymerase III delta subunit
PMIFDDHC_01422 0.0 comEC S Competence protein ComEC
PMIFDDHC_01423 3.1e-79 comEA L Competence protein ComEA
PMIFDDHC_01424 2.4e-187 ylbL T Belongs to the peptidase S16 family
PMIFDDHC_01425 3.6e-82 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PMIFDDHC_01426 4.5e-97 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
PMIFDDHC_01427 5.1e-54 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
PMIFDDHC_01428 5.9e-211 ftsW D Belongs to the SEDS family
PMIFDDHC_01429 0.0 typA T GTP-binding protein TypA
PMIFDDHC_01430 8.9e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PMIFDDHC_01431 2.5e-74 L Putative transposase DNA-binding domain
PMIFDDHC_01432 1.5e-172 S SLAP domain
PMIFDDHC_01433 2.5e-234 mepA V MATE efflux family protein
PMIFDDHC_01434 1e-248 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PMIFDDHC_01435 2.9e-174
PMIFDDHC_01436 1.7e-122 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PMIFDDHC_01437 2.8e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PMIFDDHC_01438 2.3e-29 S Protein of unknown function (DUF805)
PMIFDDHC_01439 5.6e-126 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PMIFDDHC_01440 2.9e-221 ecsB U ABC transporter
PMIFDDHC_01441 5.7e-135 ecsA V ABC transporter, ATP-binding protein
PMIFDDHC_01442 8.3e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
PMIFDDHC_01443 3.9e-25
PMIFDDHC_01444 1.5e-153 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PMIFDDHC_01445 1.9e-72 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
PMIFDDHC_01446 1.1e-265
PMIFDDHC_01447 2.4e-51 S Domain of unknown function DUF1829
PMIFDDHC_01448 2.9e-23
PMIFDDHC_01449 1.9e-186 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
PMIFDDHC_01450 0.0 L AAA domain
PMIFDDHC_01451 1.2e-230 yhaO L Ser Thr phosphatase family protein
PMIFDDHC_01452 7.2e-56 yheA S Belongs to the UPF0342 family
PMIFDDHC_01453 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PMIFDDHC_01454 6.5e-151 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PMIFDDHC_01455 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
PMIFDDHC_01456 1.7e-22 blpT
PMIFDDHC_01457 4.6e-27 S Enterocin A Immunity
PMIFDDHC_01460 1.3e-69 doc S Prophage maintenance system killer protein
PMIFDDHC_01461 2.9e-31
PMIFDDHC_01462 0.0 pepF E oligoendopeptidase F
PMIFDDHC_01463 6.9e-26 L Transposase
PMIFDDHC_01464 1.4e-37 S Putative adhesin
PMIFDDHC_01465 3.7e-261 V ABC transporter transmembrane region
PMIFDDHC_01466 4.1e-139
PMIFDDHC_01467 1.8e-31
PMIFDDHC_01470 2.4e-36
PMIFDDHC_01471 4.9e-58 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PMIFDDHC_01472 3.1e-49 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
PMIFDDHC_01473 0.0 copA 3.6.3.54 P P-type ATPase
PMIFDDHC_01474 8.2e-114 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
PMIFDDHC_01475 1e-104
PMIFDDHC_01476 1.4e-52 EGP Sugar (and other) transporter
PMIFDDHC_01477 9.1e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
PMIFDDHC_01478 3.2e-181 ccpA K catabolite control protein A
PMIFDDHC_01479 2.6e-266 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PMIFDDHC_01480 4.3e-55
PMIFDDHC_01481 1.2e-274 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PMIFDDHC_01482 8.3e-105 yutD S Protein of unknown function (DUF1027)
PMIFDDHC_01483 6.9e-144 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PMIFDDHC_01484 3.7e-100 S Protein of unknown function (DUF1461)
PMIFDDHC_01485 2.3e-116 dedA S SNARE-like domain protein
PMIFDDHC_01486 8e-185 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
PMIFDDHC_01487 1.1e-115 L PFAM Integrase catalytic
PMIFDDHC_01488 2e-57 clcA P chloride
PMIFDDHC_01489 1.8e-54 clcA P chloride
PMIFDDHC_01490 1.6e-60 clcA P chloride
PMIFDDHC_01491 4.7e-26 K FCD
PMIFDDHC_01492 6.2e-13 K FCD
PMIFDDHC_01493 1.5e-102 GM NmrA-like family
PMIFDDHC_01494 2.8e-100 S ECF transporter, substrate-specific component
PMIFDDHC_01495 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PMIFDDHC_01496 0.0 macB_3 V ABC transporter, ATP-binding protein
PMIFDDHC_01497 1.6e-194 S DUF218 domain
PMIFDDHC_01498 2.7e-120 S CAAX protease self-immunity
PMIFDDHC_01499 3e-111 ropB K Transcriptional regulator
PMIFDDHC_01500 4.2e-154 EGP Major facilitator Superfamily
PMIFDDHC_01501 5.4e-51
PMIFDDHC_01502 2.6e-155 mutR K Helix-turn-helix XRE-family like proteins
PMIFDDHC_01503 4.1e-276 V ABC transporter transmembrane region
PMIFDDHC_01504 2.3e-41 S YoeB-like toxin of bacterial type II toxin-antitoxin system
PMIFDDHC_01505 1.9e-47 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
PMIFDDHC_01506 2.8e-205 napA P Sodium/hydrogen exchanger family
PMIFDDHC_01507 0.0 cadA P P-type ATPase
PMIFDDHC_01508 1.5e-80 ykuL S (CBS) domain
PMIFDDHC_01509 1e-207 ywhK S Membrane
PMIFDDHC_01510 4.1e-44
PMIFDDHC_01511 1.2e-18 S D-Ala-teichoic acid biosynthesis protein
PMIFDDHC_01512 2.1e-285 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PMIFDDHC_01513 8.6e-237 dltB M MBOAT, membrane-bound O-acyltransferase family
PMIFDDHC_01514 1.7e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PMIFDDHC_01515 1.5e-247 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PMIFDDHC_01516 7.6e-177 pbpX2 V Beta-lactamase
PMIFDDHC_01517 2.3e-133 S Protein of unknown function (DUF975)
PMIFDDHC_01518 2.7e-137 lysA2 M Glycosyl hydrolases family 25
PMIFDDHC_01519 7.9e-291 ytgP S Polysaccharide biosynthesis protein
PMIFDDHC_01520 1.9e-36
PMIFDDHC_01521 0.0 XK27_06780 V ABC transporter permease
PMIFDDHC_01522 5.1e-125 XK27_06785 V ABC transporter, ATP-binding protein
PMIFDDHC_01523 3.1e-237 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMIFDDHC_01524 2.6e-166 S Alpha/beta hydrolase of unknown function (DUF915)
PMIFDDHC_01525 0.0 clpE O AAA domain (Cdc48 subfamily)
PMIFDDHC_01526 1e-95
PMIFDDHC_01527 7.8e-78 2.5.1.74 H UbiA prenyltransferase family
PMIFDDHC_01529 5e-129 znuB U ABC 3 transport family
PMIFDDHC_01530 2.3e-116 fhuC P ABC transporter
PMIFDDHC_01531 1.6e-147 psaA P Belongs to the bacterial solute-binding protein 9 family
PMIFDDHC_01532 5.4e-41 K helix_turn_helix, Arsenical Resistance Operon Repressor
PMIFDDHC_01533 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
PMIFDDHC_01534 2.2e-168 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
PMIFDDHC_01535 1.8e-136 fruR K DeoR C terminal sensor domain
PMIFDDHC_01536 1.8e-218 natB CP ABC-2 family transporter protein
PMIFDDHC_01537 1.1e-164 natA S ABC transporter, ATP-binding protein
PMIFDDHC_01538 1.7e-67
PMIFDDHC_01539 2e-23
PMIFDDHC_01540 8.2e-31 yozG K Transcriptional regulator
PMIFDDHC_01541 3.7e-83
PMIFDDHC_01542 3e-21
PMIFDDHC_01546 2.2e-129 blpT
PMIFDDHC_01547 1.4e-107 M Transport protein ComB
PMIFDDHC_01548 9.3e-116 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
PMIFDDHC_01549 4.4e-135 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
PMIFDDHC_01550 4.3e-228 amtB P ammonium transporter
PMIFDDHC_01551 1.4e-60
PMIFDDHC_01552 0.0 lhr L DEAD DEAH box helicase
PMIFDDHC_01553 3.5e-244 P P-loop Domain of unknown function (DUF2791)
PMIFDDHC_01554 0.0 S TerB-C domain
PMIFDDHC_01555 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
PMIFDDHC_01556 3.9e-298 V ABC transporter transmembrane region
PMIFDDHC_01557 2.3e-156 K Helix-turn-helix XRE-family like proteins
PMIFDDHC_01558 3.7e-59 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
PMIFDDHC_01559 2.1e-32
PMIFDDHC_01560 2.1e-79 4.1.1.44 S Carboxymuconolactone decarboxylase family
PMIFDDHC_01561 3.2e-28 4.1.1.44 S Carboxymuconolactone decarboxylase family
PMIFDDHC_01562 1e-218 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
PMIFDDHC_01563 2.1e-79 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMIFDDHC_01564 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
PMIFDDHC_01565 0.0 mtlR K Mga helix-turn-helix domain
PMIFDDHC_01566 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PMIFDDHC_01567 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PMIFDDHC_01568 1.6e-244 cycA E Amino acid permease
PMIFDDHC_01569 9.9e-86 maa S transferase hexapeptide repeat
PMIFDDHC_01570 1.1e-158 K Transcriptional regulator
PMIFDDHC_01571 9.9e-64 manO S Domain of unknown function (DUF956)
PMIFDDHC_01572 1e-173 manN G system, mannose fructose sorbose family IID component
PMIFDDHC_01573 1.7e-129 manY G PTS system
PMIFDDHC_01574 8.7e-187 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
PMIFDDHC_01575 4e-57 K Helix-turn-helix domain
PMIFDDHC_01576 2.7e-111 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PMIFDDHC_01577 2e-169 ppaC 3.6.1.1 C inorganic pyrophosphatase
PMIFDDHC_01578 5.6e-183 K Transcriptional regulator
PMIFDDHC_01579 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PMIFDDHC_01580 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PMIFDDHC_01581 3.5e-109 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PMIFDDHC_01582 0.0 snf 2.7.11.1 KL domain protein
PMIFDDHC_01583 1.2e-157 M Peptidase family M1 domain
PMIFDDHC_01584 1.4e-83 L Resolvase, N-terminal
PMIFDDHC_01585 5e-84 L Putative transposase DNA-binding domain
PMIFDDHC_01586 1e-215 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PMIFDDHC_01587 4.8e-34 S reductase
PMIFDDHC_01588 4.4e-39 S reductase
PMIFDDHC_01589 2.7e-32 S reductase
PMIFDDHC_01590 1.3e-148 yxeH S hydrolase
PMIFDDHC_01591 6.8e-181 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PMIFDDHC_01592 1.1e-243 yfnA E Amino Acid
PMIFDDHC_01593 6.8e-110 dedA 3.1.3.1 S SNARE associated Golgi protein
PMIFDDHC_01594 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PMIFDDHC_01595 1.7e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PMIFDDHC_01596 2.2e-292 I Acyltransferase
PMIFDDHC_01597 5.4e-175 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PMIFDDHC_01598 5.1e-142 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PMIFDDHC_01599 1.5e-34 yrvD S Lipopolysaccharide assembly protein A domain
PMIFDDHC_01600 1.3e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PMIFDDHC_01601 2.6e-310 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PMIFDDHC_01602 2.3e-23 S Protein of unknown function (DUF2929)
PMIFDDHC_01603 0.0 dnaE 2.7.7.7 L DNA polymerase
PMIFDDHC_01604 7.9e-67 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PMIFDDHC_01605 9.2e-65 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PMIFDDHC_01606 1.1e-12 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
PMIFDDHC_01607 1.2e-116 mmuP E amino acid
PMIFDDHC_01608 3.2e-272 pepV 3.5.1.18 E dipeptidase PepV
PMIFDDHC_01609 1.6e-93 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
PMIFDDHC_01610 3.2e-283 E Amino acid permease
PMIFDDHC_01611 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
PMIFDDHC_01612 1.5e-244 ynbB 4.4.1.1 P aluminum resistance
PMIFDDHC_01613 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PMIFDDHC_01614 9.9e-82 C Flavodoxin
PMIFDDHC_01615 4.1e-101 xerD L Phage integrase, N-terminal SAM-like domain
PMIFDDHC_01616 7.1e-63 M LysM domain protein
PMIFDDHC_01617 8.3e-87 C Aldo keto reductase
PMIFDDHC_01618 4.8e-181 lacX 5.1.3.3 G Aldose 1-epimerase
PMIFDDHC_01619 8.2e-236 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PMIFDDHC_01620 1.9e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PMIFDDHC_01621 2.2e-141 xerC D Phage integrase, N-terminal SAM-like domain
PMIFDDHC_01622 1.4e-248 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PMIFDDHC_01623 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PMIFDDHC_01624 5.8e-152 dprA LU DNA protecting protein DprA
PMIFDDHC_01625 4.6e-132 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PMIFDDHC_01626 8.1e-154 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PMIFDDHC_01627 1.9e-94 yjcE P Sodium proton antiporter
PMIFDDHC_01628 1.5e-40 yjcE P Sodium proton antiporter
PMIFDDHC_01629 1.1e-66 yjcE P NhaP-type Na H and K H
PMIFDDHC_01630 7.1e-36 yozE S Belongs to the UPF0346 family
PMIFDDHC_01631 5.7e-147 DegV S Uncharacterised protein, DegV family COG1307
PMIFDDHC_01632 1.2e-107 hlyIII S protein, hemolysin III
PMIFDDHC_01633 1.6e-224 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PMIFDDHC_01634 9.6e-158 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PMIFDDHC_01635 2.6e-102 M hydrolase, family 25
PMIFDDHC_01636 4e-22 S Bacteriophage holin of superfamily 6 (Holin_LLH)
PMIFDDHC_01642 1.4e-17 GT2,GT4 LM gp58-like protein
PMIFDDHC_01644 7.1e-13 S Domain of unknown function (DUF2479)
PMIFDDHC_01646 2.1e-246 S Phage minor structural protein
PMIFDDHC_01647 1.2e-31 S phage tail
PMIFDDHC_01648 1.1e-141 D NLP P60 protein
PMIFDDHC_01651 3.5e-28 S Phage tail tube protein
PMIFDDHC_01652 8.9e-13 S Protein of unknown function (DUF806)
PMIFDDHC_01653 1.3e-29 S Bacteriophage HK97-gp10, putative tail-component
PMIFDDHC_01655 7.9e-14 S Phage gp6-like head-tail connector protein
PMIFDDHC_01656 1.9e-82 S Phage capsid family
PMIFDDHC_01657 1.6e-46 S Clp protease
PMIFDDHC_01658 1.4e-92 S Phage portal protein
PMIFDDHC_01660 3.9e-180 S overlaps another CDS with the same product name
PMIFDDHC_01661 1.7e-25 L Phage terminase, small subunit
PMIFDDHC_01663 8e-37 V HNH nucleases
PMIFDDHC_01667 1.9e-237 brnQ U Component of the transport system for branched-chain amino acids
PMIFDDHC_01668 2.8e-24 S Alpha beta hydrolase
PMIFDDHC_01669 2.4e-273 lsa S ABC transporter
PMIFDDHC_01671 7.3e-173 MA20_14895 S Conserved hypothetical protein 698
PMIFDDHC_01672 6.3e-26 XK26_02160 S Pyridoxamine 5'-phosphate oxidase
PMIFDDHC_01673 1.9e-30 XK26_02160 S Pyridoxamine 5'-phosphate oxidase
PMIFDDHC_01674 1e-284 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
PMIFDDHC_01675 1.2e-30 copZ C Heavy-metal-associated domain
PMIFDDHC_01676 6.4e-09 dps P Belongs to the Dps family
PMIFDDHC_01677 2.6e-94 sip L Belongs to the 'phage' integrase family
PMIFDDHC_01678 6.2e-12
PMIFDDHC_01680 3.7e-12 E Zn peptidase
PMIFDDHC_01681 1.2e-22 K Cro/C1-type HTH DNA-binding domain
PMIFDDHC_01682 6.1e-18 K Helix-turn-helix XRE-family like proteins
PMIFDDHC_01683 9.2e-93 S DNA binding
PMIFDDHC_01689 1.8e-31 S Helix-turn-helix domain
PMIFDDHC_01690 5.5e-18
PMIFDDHC_01692 4.6e-45
PMIFDDHC_01693 4.2e-129 S Protein of unknown function (DUF1351)
PMIFDDHC_01694 1.2e-135 S ERF superfamily
PMIFDDHC_01695 7.1e-98 L Helix-turn-helix domain
PMIFDDHC_01704 1.2e-37 S VRR_NUC
PMIFDDHC_01706 7.1e-15
PMIFDDHC_01715 1.1e-217 S Terminase-like family
PMIFDDHC_01716 1.4e-134 S Protein of unknown function (DUF1073)
PMIFDDHC_01717 1.3e-47 S Phage Mu protein F like protein
PMIFDDHC_01718 1.3e-12 S Lysin motif
PMIFDDHC_01719 1.8e-58 S Uncharacterized protein conserved in bacteria (DUF2213)
PMIFDDHC_01720 5.3e-34
PMIFDDHC_01721 5.3e-93 Z012_11565 S Uncharacterized protein conserved in bacteria (DUF2184)
PMIFDDHC_01722 9.2e-20 S Protein of unknown function (DUF4054)
PMIFDDHC_01723 3.4e-30
PMIFDDHC_01724 2.1e-25
PMIFDDHC_01725 3.3e-31
PMIFDDHC_01726 5.9e-103 Z012_02110 S Protein of unknown function (DUF3383)
PMIFDDHC_01727 9.3e-29
PMIFDDHC_01728 1.1e-08
PMIFDDHC_01730 7.2e-235 3.4.14.13 M Phage tail tape measure protein TP901
PMIFDDHC_01731 4.3e-53 M LysM domain
PMIFDDHC_01732 7.9e-38
PMIFDDHC_01733 5.9e-117
PMIFDDHC_01734 2.8e-48
PMIFDDHC_01735 1.4e-31
PMIFDDHC_01736 5.9e-126 Z012_12235 S Baseplate J-like protein
PMIFDDHC_01737 2e-11
PMIFDDHC_01738 3.3e-35
PMIFDDHC_01739 1.9e-50
PMIFDDHC_01745 1.2e-10
PMIFDDHC_01747 1.7e-16
PMIFDDHC_01749 7e-16
PMIFDDHC_01750 6.1e-27
PMIFDDHC_01751 3.2e-182 M Glycosyl hydrolases family 25
PMIFDDHC_01753 3.2e-19
PMIFDDHC_01754 2.1e-57 dps P Belongs to the Dps family
PMIFDDHC_01755 1.9e-86 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
PMIFDDHC_01756 2e-129 yobV1 K WYL domain
PMIFDDHC_01757 3.3e-54 S pyridoxamine 5-phosphate
PMIFDDHC_01758 3.8e-84 dps P Belongs to the Dps family
PMIFDDHC_01759 3.3e-237 L COG2963 Transposase and inactivated derivatives
PMIFDDHC_01760 4.7e-46 pspC KT PspC domain
PMIFDDHC_01762 1.3e-240 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PMIFDDHC_01763 2.8e-154 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PMIFDDHC_01764 6.7e-98 M ErfK YbiS YcfS YnhG
PMIFDDHC_01765 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PMIFDDHC_01766 4.6e-171 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
PMIFDDHC_01767 8.3e-24 papP P ABC transporter, permease protein
PMIFDDHC_01769 4.5e-58 yodB K Transcriptional regulator, HxlR family
PMIFDDHC_01770 7.7e-135 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PMIFDDHC_01771 2.9e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PMIFDDHC_01772 2.4e-162 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PMIFDDHC_01773 5.7e-83 S Aminoacyl-tRNA editing domain
PMIFDDHC_01774 6.1e-224 S SLAP domain
PMIFDDHC_01775 1.5e-97 S CAAX protease self-immunity
PMIFDDHC_01776 1e-12
PMIFDDHC_01777 1.3e-277 arlS 2.7.13.3 T Histidine kinase
PMIFDDHC_01778 1.2e-126 K response regulator
PMIFDDHC_01779 4.7e-97 yceD S Uncharacterized ACR, COG1399
PMIFDDHC_01780 4.6e-216 ylbM S Belongs to the UPF0348 family
PMIFDDHC_01781 5.3e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PMIFDDHC_01782 6.6e-110 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
PMIFDDHC_01783 4.4e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PMIFDDHC_01784 4.4e-200 yqeH S Ribosome biogenesis GTPase YqeH
PMIFDDHC_01785 4.2e-84 yqeG S HAD phosphatase, family IIIA
PMIFDDHC_01786 9.2e-201 tnpB L Putative transposase DNA-binding domain
PMIFDDHC_01787 1.1e-152 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
PMIFDDHC_01788 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PMIFDDHC_01789 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PMIFDDHC_01790 3.2e-72 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PMIFDDHC_01791 4e-98 rihB 3.2.2.1 F Nucleoside
PMIFDDHC_01792 3.8e-103 potB E Binding-protein-dependent transport system inner membrane component
PMIFDDHC_01793 2.2e-108 potC3 E Binding-protein-dependent transport system inner membrane component
PMIFDDHC_01794 1.9e-109 potA11 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PMIFDDHC_01795 7.3e-21 hicA S HicA toxin of bacterial toxin-antitoxin,
PMIFDDHC_01796 2.1e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PMIFDDHC_01797 6.4e-251 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PMIFDDHC_01798 7e-189 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PMIFDDHC_01801 3.9e-206 4.2.1.126 S Bacterial protein of unknown function (DUF871)
PMIFDDHC_01802 3.3e-194 ampC V Beta-lactamase
PMIFDDHC_01805 1.7e-262 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
PMIFDDHC_01806 1.3e-113 tdk 2.7.1.21 F thymidine kinase
PMIFDDHC_01807 3.1e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PMIFDDHC_01808 7.3e-155 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PMIFDDHC_01809 3.7e-190 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PMIFDDHC_01810 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PMIFDDHC_01811 3.8e-128 atpB C it plays a direct role in the translocation of protons across the membrane
PMIFDDHC_01812 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PMIFDDHC_01813 3.4e-46 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PMIFDDHC_01814 2.8e-91 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PMIFDDHC_01815 2.8e-282 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PMIFDDHC_01816 2e-172 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PMIFDDHC_01817 3.3e-240 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PMIFDDHC_01818 9e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PMIFDDHC_01819 2e-30 ywzB S Protein of unknown function (DUF1146)
PMIFDDHC_01820 1.2e-177 mbl D Cell shape determining protein MreB Mrl
PMIFDDHC_01821 1e-50 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PMIFDDHC_01822 3.3e-33 S Protein of unknown function (DUF2969)
PMIFDDHC_01823 1.4e-215 rodA D Belongs to the SEDS family
PMIFDDHC_01824 2.3e-78 usp6 T universal stress protein
PMIFDDHC_01825 8.4e-39
PMIFDDHC_01826 2.2e-238 rarA L recombination factor protein RarA
PMIFDDHC_01827 1.3e-84 yueI S Protein of unknown function (DUF1694)
PMIFDDHC_01828 1.4e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PMIFDDHC_01829 2.1e-294 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PMIFDDHC_01830 8.1e-213 iscS2 2.8.1.7 E Aminotransferase class V
PMIFDDHC_01831 2e-225 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PMIFDDHC_01832 1.9e-183 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PMIFDDHC_01833 3.2e-119 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PMIFDDHC_01834 5.5e-44 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PMIFDDHC_01835 2.1e-65 2.4.1.83 GT2 S GtrA-like protein
PMIFDDHC_01836 6.2e-171 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
PMIFDDHC_01837 1.5e-94 S Protein of unknown function (DUF3990)
PMIFDDHC_01838 2.9e-44
PMIFDDHC_01840 0.0 3.6.3.8 P P-type ATPase
PMIFDDHC_01841 5.6e-132 S AAA domain, putative AbiEii toxin, Type IV TA system
PMIFDDHC_01842 2.5e-52
PMIFDDHC_01843 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PMIFDDHC_01844 1.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PMIFDDHC_01845 5.7e-126 S Haloacid dehalogenase-like hydrolase
PMIFDDHC_01846 2.3e-108 radC L DNA repair protein
PMIFDDHC_01847 2.4e-176 mreB D cell shape determining protein MreB
PMIFDDHC_01848 2e-147 mreC M Involved in formation and maintenance of cell shape
PMIFDDHC_01849 1.3e-93 mreD
PMIFDDHC_01851 6.4e-54 S Protein of unknown function (DUF3397)
PMIFDDHC_01852 6.3e-78 mraZ K Belongs to the MraZ family
PMIFDDHC_01853 7.2e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PMIFDDHC_01854 1.8e-54 ftsL D Cell division protein FtsL
PMIFDDHC_01855 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PMIFDDHC_01856 1.5e-175 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PMIFDDHC_01857 5e-262 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PMIFDDHC_01858 5.7e-208 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PMIFDDHC_01859 4.5e-152 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PMIFDDHC_01860 1.3e-246 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PMIFDDHC_01861 1.7e-206 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PMIFDDHC_01862 7.3e-74 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PMIFDDHC_01863 1.7e-45 yggT S YGGT family
PMIFDDHC_01864 5.7e-149 ylmH S S4 domain protein
PMIFDDHC_01865 2.8e-74 gpsB D DivIVA domain protein
PMIFDDHC_01866 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PMIFDDHC_01867 3.6e-31 cspA K 'Cold-shock' DNA-binding domain
PMIFDDHC_01868 2.8e-102 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
PMIFDDHC_01869 6.7e-37
PMIFDDHC_01870 1.2e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PMIFDDHC_01871 3.2e-217 iscS 2.8.1.7 E Aminotransferase class V
PMIFDDHC_01872 5.4e-56 XK27_04120 S Putative amino acid metabolism
PMIFDDHC_01873 5.1e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PMIFDDHC_01874 3.9e-127 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PMIFDDHC_01875 8.3e-106 S Repeat protein
PMIFDDHC_01876 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PMIFDDHC_01877 1.3e-293 L Nuclease-related domain
PMIFDDHC_01878 2.3e-164 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PMIFDDHC_01879 8.1e-126 S PAS domain
PMIFDDHC_01880 1.6e-11
PMIFDDHC_01881 2.7e-57
PMIFDDHC_01882 6.6e-56
PMIFDDHC_01883 4e-08
PMIFDDHC_01884 3.3e-183 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PMIFDDHC_01885 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PMIFDDHC_01886 2.3e-167 cvfB S S1 domain
PMIFDDHC_01887 2.9e-165 xerD D recombinase XerD
PMIFDDHC_01888 6.7e-30 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PMIFDDHC_01889 7.6e-132 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PMIFDDHC_01890 4.1e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PMIFDDHC_01891 3.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PMIFDDHC_01892 8.7e-114 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PMIFDDHC_01893 2.7e-18 M Lysin motif
PMIFDDHC_01894 5e-114 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PMIFDDHC_01895 5.5e-212 rpsA 1.17.7.4 J Ribosomal protein S1
PMIFDDHC_01896 1.9e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PMIFDDHC_01897 2.3e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PMIFDDHC_01898 8.7e-229 S Tetratricopeptide repeat protein
PMIFDDHC_01899 1.3e-237 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PMIFDDHC_01900 9.3e-86
PMIFDDHC_01901 2.5e-283 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PMIFDDHC_01902 7.7e-182 S Alpha/beta hydrolase of unknown function (DUF915)
PMIFDDHC_01903 3e-147 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PMIFDDHC_01904 2.2e-139 ypuA S Protein of unknown function (DUF1002)
PMIFDDHC_01905 3.7e-156 epsV 2.7.8.12 S glycosyl transferase family 2
PMIFDDHC_01906 7.3e-126 S Alpha/beta hydrolase family
PMIFDDHC_01907 1.4e-140 L An automated process has identified a potential problem with this gene model
PMIFDDHC_01908 5.6e-36
PMIFDDHC_01909 3.3e-183 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PMIFDDHC_01910 8.4e-125 luxT K Bacterial regulatory proteins, tetR family
PMIFDDHC_01911 2.8e-135
PMIFDDHC_01912 1.3e-258 glnPH2 P ABC transporter permease
PMIFDDHC_01913 2.6e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PMIFDDHC_01914 6.4e-224 S Cysteine-rich secretory protein family
PMIFDDHC_01915 1.2e-205 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PMIFDDHC_01916 1.4e-112
PMIFDDHC_01917 2.2e-202 yibE S overlaps another CDS with the same product name
PMIFDDHC_01918 4.9e-129 yibF S overlaps another CDS with the same product name
PMIFDDHC_01919 8.7e-145 I alpha/beta hydrolase fold
PMIFDDHC_01920 0.0 G Belongs to the glycosyl hydrolase 31 family
PMIFDDHC_01921 1e-215 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PMIFDDHC_01922 3.3e-119
PMIFDDHC_01923 4.2e-101
PMIFDDHC_01924 6e-210 pepA E M42 glutamyl aminopeptidase
PMIFDDHC_01925 2.2e-311 ybiT S ABC transporter, ATP-binding protein
PMIFDDHC_01926 5.9e-174 S Aldo keto reductase
PMIFDDHC_01927 2.5e-138
PMIFDDHC_01928 3.3e-203 steT E amino acid
PMIFDDHC_01929 6.8e-240 steT E amino acid
PMIFDDHC_01930 4.9e-130 yfeJ 6.3.5.2 F glutamine amidotransferase
PMIFDDHC_01931 6.4e-148 glnH ET ABC transporter
PMIFDDHC_01932 1.4e-80 K Transcriptional regulator, MarR family
PMIFDDHC_01933 1.7e-310 XK27_09600 V ABC transporter, ATP-binding protein
PMIFDDHC_01934 0.0 V ABC transporter transmembrane region
PMIFDDHC_01935 3.8e-102 S ABC-type cobalt transport system, permease component
PMIFDDHC_01936 8.3e-202 G MFS/sugar transport protein
PMIFDDHC_01937 1.8e-41 G MFS/sugar transport protein
PMIFDDHC_01938 1.8e-113 udk 2.7.1.48 F Zeta toxin
PMIFDDHC_01939 1.9e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
PMIFDDHC_01940 1.5e-149 glnH ET ABC transporter substrate-binding protein
PMIFDDHC_01941 9.7e-91 gluC P ABC transporter permease
PMIFDDHC_01942 4.7e-109 glnP P ABC transporter permease
PMIFDDHC_01943 1.1e-164 S Protein of unknown function (DUF2974)
PMIFDDHC_01944 5.6e-86
PMIFDDHC_01945 5.4e-211 S Uncharacterized protein conserved in bacteria (DUF2325)
PMIFDDHC_01946 2.1e-45 S PFAM Archaeal ATPase
PMIFDDHC_01948 2.4e-57 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PMIFDDHC_01949 5.9e-45
PMIFDDHC_01951 5.5e-30
PMIFDDHC_01952 1.1e-40 S Protein of unknown function (DUF2922)
PMIFDDHC_01953 1.1e-120 S SLAP domain
PMIFDDHC_01954 2.1e-53 3.6.4.12 S PD-(D/E)XK nuclease family transposase
PMIFDDHC_01955 7.3e-25
PMIFDDHC_01956 3.6e-77 K DNA-templated transcription, initiation
PMIFDDHC_01957 2.7e-43
PMIFDDHC_01958 6.3e-100 S SLAP domain
PMIFDDHC_01960 4.1e-215 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PMIFDDHC_01961 6.5e-180 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
PMIFDDHC_01962 0.0 yjbQ P TrkA C-terminal domain protein
PMIFDDHC_01963 1.7e-106 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PMIFDDHC_01964 2.1e-161 S Oxidoreductase family, NAD-binding Rossmann fold
PMIFDDHC_01965 4.6e-130
PMIFDDHC_01966 7.1e-117
PMIFDDHC_01967 5e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PMIFDDHC_01968 5.5e-36
PMIFDDHC_01969 1.7e-160 scrR K Periplasmic binding protein domain
PMIFDDHC_01970 2.8e-140 msmE G Bacterial extracellular solute-binding protein
PMIFDDHC_01971 4.7e-83 yveB 2.7.4.29 I PAP2 superfamily
PMIFDDHC_01972 0.0 pepN 3.4.11.2 E aminopeptidase
PMIFDDHC_01973 2.8e-47 lysM M LysM domain
PMIFDDHC_01974 4.4e-175
PMIFDDHC_01975 2.8e-211 mdtG EGP Major facilitator Superfamily
PMIFDDHC_01976 6.7e-88 ymdB S Macro domain protein
PMIFDDHC_01978 6.7e-09
PMIFDDHC_01979 1.6e-28
PMIFDDHC_01982 1.5e-59 K Helix-turn-helix XRE-family like proteins
PMIFDDHC_01983 3.3e-147 malG P ABC transporter permease
PMIFDDHC_01984 1.1e-250 malF P Binding-protein-dependent transport system inner membrane component
PMIFDDHC_01985 2.3e-213 malE G Bacterial extracellular solute-binding protein
PMIFDDHC_01986 3e-209 msmX P Belongs to the ABC transporter superfamily
PMIFDDHC_01987 1.4e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
PMIFDDHC_01988 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
PMIFDDHC_01989 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
PMIFDDHC_01990 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
PMIFDDHC_01991 1.3e-69 S PAS domain
PMIFDDHC_01992 9.1e-204 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PMIFDDHC_01993 2e-177 yvdE K helix_turn _helix lactose operon repressor
PMIFDDHC_01994 6.3e-145 ptp2 3.1.3.48 T Tyrosine phosphatase family
PMIFDDHC_01995 1e-292 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PMIFDDHC_01996 9.6e-152 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PMIFDDHC_01997 1.2e-145 S Metal-independent alpha-mannosidase (GH125)
PMIFDDHC_01998 3.8e-184 manA 5.3.1.8 G mannose-6-phosphate isomerase
PMIFDDHC_01999 2e-216 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PMIFDDHC_02001 4.7e-249 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMIFDDHC_02002 2.8e-211 yfmL 3.6.4.13 L DEAD DEAH box helicase
PMIFDDHC_02003 1.3e-61 M Glycosyl hydrolases family 25
PMIFDDHC_02004 2.6e-61 M Glycosyl hydrolases family 25
PMIFDDHC_02005 3.8e-137 XK27_01040 S Protein of unknown function (DUF1129)
PMIFDDHC_02006 3.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PMIFDDHC_02007 9.6e-45 yyzM S Bacterial protein of unknown function (DUF951)
PMIFDDHC_02008 1.5e-153 spo0J K Belongs to the ParB family
PMIFDDHC_02009 3.4e-138 soj D Sporulation initiation inhibitor
PMIFDDHC_02010 1.5e-147 noc K Belongs to the ParB family
PMIFDDHC_02011 1.2e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PMIFDDHC_02012 3e-53 cvpA S Colicin V production protein
PMIFDDHC_02014 2.5e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PMIFDDHC_02015 6e-151 3.1.3.48 T Tyrosine phosphatase family
PMIFDDHC_02016 2e-97 azr 1.5.1.36 S NADPH-dependent FMN reductase
PMIFDDHC_02017 6.4e-96 nqr 1.5.1.36 S NADPH-dependent FMN reductase
PMIFDDHC_02018 2.4e-110 K WHG domain
PMIFDDHC_02019 3e-37
PMIFDDHC_02020 1.6e-61
PMIFDDHC_02021 3.3e-250 celD G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMIFDDHC_02022 3.2e-71 S Domain of unknown function (DUF3284)
PMIFDDHC_02023 1e-300 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PMIFDDHC_02024 5e-120 gmuR K UTRA
PMIFDDHC_02025 3.7e-223 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PMIFDDHC_02026 5.8e-274 bglA3 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PMIFDDHC_02027 9.2e-137 ypbG 2.7.1.2 GK ROK family
PMIFDDHC_02028 1.2e-85 C nitroreductase
PMIFDDHC_02030 8.8e-82 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PMIFDDHC_02031 1.1e-76 2.7.7.65 T GGDEF domain
PMIFDDHC_02032 8.2e-36
PMIFDDHC_02033 1.6e-116 ica2 GT2 M Glycosyl transferase family group 2
PMIFDDHC_02034 3.7e-26 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
PMIFDDHC_02035 1.2e-92 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
PMIFDDHC_02036 1e-149 D Alpha beta
PMIFDDHC_02037 1e-297 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PMIFDDHC_02038 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
PMIFDDHC_02039 8.3e-143 licT K CAT RNA binding domain
PMIFDDHC_02040 3.8e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PMIFDDHC_02041 7.4e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PMIFDDHC_02042 1.6e-118
PMIFDDHC_02043 3e-75 K Penicillinase repressor
PMIFDDHC_02044 1.4e-147 S hydrolase
PMIFDDHC_02045 3.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PMIFDDHC_02046 2e-172 ybbR S YbbR-like protein
PMIFDDHC_02047 6.4e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PMIFDDHC_02048 7.3e-208 potD P ABC transporter
PMIFDDHC_02049 4.8e-127 potC P ABC transporter permease
PMIFDDHC_02050 1.9e-128 potB P ABC transporter permease
PMIFDDHC_02051 1.8e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PMIFDDHC_02052 2e-163 murB 1.3.1.98 M Cell wall formation
PMIFDDHC_02053 4e-98 dnaQ 2.7.7.7 L DNA polymerase III
PMIFDDHC_02054 7e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
PMIFDDHC_02055 4.1e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PMIFDDHC_02056 9.7e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PMIFDDHC_02057 3.4e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
PMIFDDHC_02058 1.2e-94
PMIFDDHC_02059 6e-199 L COG2826 Transposase and inactivated derivatives, IS30 family
PMIFDDHC_02060 1.7e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PMIFDDHC_02061 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PMIFDDHC_02062 6.5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PMIFDDHC_02063 2.6e-189 cggR K Putative sugar-binding domain
PMIFDDHC_02065 9.2e-289
PMIFDDHC_02066 6.6e-273 ycaM E amino acid
PMIFDDHC_02067 4.7e-140 S Cysteine-rich secretory protein family
PMIFDDHC_02068 9.9e-33 S Protein of unknown function (DUF3021)
PMIFDDHC_02069 2.5e-45 K LytTr DNA-binding domain
PMIFDDHC_02070 4.7e-93 cylB V ABC-2 type transporter
PMIFDDHC_02071 4.7e-117 cylA V ABC transporter
PMIFDDHC_02072 3.2e-77 K MerR HTH family regulatory protein
PMIFDDHC_02073 1.8e-262 lmrB EGP Major facilitator Superfamily
PMIFDDHC_02074 1.6e-94 S Domain of unknown function (DUF4811)
PMIFDDHC_02075 2.5e-130 ybbM S Uncharacterised protein family (UPF0014)
PMIFDDHC_02076 1.1e-90 ybbL S ABC transporter, ATP-binding protein
PMIFDDHC_02077 9.7e-59 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PMIFDDHC_02078 9.3e-71 yslB S Protein of unknown function (DUF2507)
PMIFDDHC_02079 6.6e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PMIFDDHC_02080 5.6e-112 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PMIFDDHC_02082 6.5e-114 K sequence-specific DNA binding
PMIFDDHC_02083 2.5e-14
PMIFDDHC_02085 2.1e-141 ykuT M mechanosensitive ion channel
PMIFDDHC_02086 9.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PMIFDDHC_02087 1.3e-36
PMIFDDHC_02088 3.6e-151 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
PMIFDDHC_02089 9e-144 2.4.2.3 F Phosphorylase superfamily
PMIFDDHC_02090 9.6e-138 2.4.2.3 F Phosphorylase superfamily
PMIFDDHC_02091 0.0 clpE O Belongs to the ClpA ClpB family
PMIFDDHC_02092 5.3e-26
PMIFDDHC_02093 8.5e-41 ptsH G phosphocarrier protein HPR
PMIFDDHC_02094 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PMIFDDHC_02095 3.9e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PMIFDDHC_02096 8.5e-139 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
PMIFDDHC_02097 2.9e-159 coiA 3.6.4.12 S Competence protein
PMIFDDHC_02098 4.6e-114 yjbH Q Thioredoxin
PMIFDDHC_02099 5.2e-110 yjbK S CYTH
PMIFDDHC_02100 1.2e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
PMIFDDHC_02101 3.8e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PMIFDDHC_02102 5.6e-115 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PMIFDDHC_02103 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
PMIFDDHC_02104 4.2e-92 S SNARE associated Golgi protein
PMIFDDHC_02105 5.4e-209 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PMIFDDHC_02106 1.1e-146 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
PMIFDDHC_02107 8.9e-187 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
PMIFDDHC_02108 2.3e-198 oppD P Belongs to the ABC transporter superfamily
PMIFDDHC_02109 1.9e-175 oppF P Belongs to the ABC transporter superfamily
PMIFDDHC_02110 1.4e-256 pepC 3.4.22.40 E aminopeptidase
PMIFDDHC_02111 3.9e-72 hsp O Belongs to the small heat shock protein (HSP20) family
PMIFDDHC_02112 2.6e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PMIFDDHC_02113 1e-111
PMIFDDHC_02115 1.7e-110 E Belongs to the SOS response-associated peptidase family
PMIFDDHC_02116 1.1e-192 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PMIFDDHC_02117 1.8e-89 comEB 3.5.4.12 F MafB19-like deaminase
PMIFDDHC_02118 2e-103 S TPM domain
PMIFDDHC_02119 1.5e-132 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PMIFDDHC_02120 1e-307 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
PMIFDDHC_02121 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PMIFDDHC_02122 3e-147 tatD L hydrolase, TatD family
PMIFDDHC_02123 1e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PMIFDDHC_02124 3e-151 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PMIFDDHC_02125 4.5e-39 veg S Biofilm formation stimulator VEG
PMIFDDHC_02126 1.1e-147 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
PMIFDDHC_02127 1.3e-172 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PMIFDDHC_02128 2.2e-148 msmR K AraC-like ligand binding domain
PMIFDDHC_02129 1.4e-226 pbuX F xanthine permease
PMIFDDHC_02130 3.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PMIFDDHC_02131 2.4e-43 K Helix-turn-helix
PMIFDDHC_02132 3e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PMIFDDHC_02134 4.9e-99 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
PMIFDDHC_02135 3.3e-73 3.2.1.18 GH33 M Rib/alpha-like repeat
PMIFDDHC_02136 1.3e-54 S protein encoded in hypervariable junctions of pilus gene clusters
PMIFDDHC_02137 4.7e-25 S Protein conserved in bacteria
PMIFDDHC_02138 3.9e-57
PMIFDDHC_02139 7.2e-86
PMIFDDHC_02140 2.4e-264 yheS_2 S ATPases associated with a variety of cellular activities
PMIFDDHC_02141 1e-142 XK27_05540 S DUF218 domain
PMIFDDHC_02142 1.2e-109
PMIFDDHC_02143 3.5e-83
PMIFDDHC_02144 1.6e-82 yicL EG EamA-like transporter family
PMIFDDHC_02145 5.9e-166 EG EamA-like transporter family
PMIFDDHC_02146 7.3e-164 EG EamA-like transporter family
PMIFDDHC_02147 2.3e-36
PMIFDDHC_02149 5.2e-13
PMIFDDHC_02150 1.2e-152
PMIFDDHC_02153 2.4e-81 M NlpC/P60 family
PMIFDDHC_02154 1.2e-131 cobQ S glutamine amidotransferase
PMIFDDHC_02155 6.5e-64 L RelB antitoxin
PMIFDDHC_02156 2.9e-200 V ABC transporter transmembrane region
PMIFDDHC_02157 6.8e-186 G Transmembrane secretion effector
PMIFDDHC_02158 2.3e-121 V Abi-like protein
PMIFDDHC_02160 4.8e-118 K Helix-turn-helix XRE-family like proteins
PMIFDDHC_02161 3.2e-178 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PMIFDDHC_02162 4.6e-100 3.6.1.27 I Acid phosphatase homologues
PMIFDDHC_02163 2.8e-151 yitS S Uncharacterised protein, DegV family COG1307
PMIFDDHC_02164 4.4e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PMIFDDHC_02165 7.5e-91 S Domain of unknown function (DUF4767)
PMIFDDHC_02169 0.0 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
PMIFDDHC_02170 4.2e-61 V Abi-like protein
PMIFDDHC_02171 0.0 L AAA domain
PMIFDDHC_02173 1.5e-18 S CRISPR-associated protein (Cas_Csn2)
PMIFDDHC_02174 1.2e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PMIFDDHC_02175 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PMIFDDHC_02176 3.5e-71 yqeY S YqeY-like protein
PMIFDDHC_02177 1.1e-175 phoH T phosphate starvation-inducible protein PhoH
PMIFDDHC_02178 2.2e-93 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PMIFDDHC_02179 2.1e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PMIFDDHC_02180 2.7e-268 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
PMIFDDHC_02181 5.3e-136 glvR K Helix-turn-helix domain, rpiR family
PMIFDDHC_02182 9.4e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
PMIFDDHC_02183 5.9e-09
PMIFDDHC_02184 4.4e-43
PMIFDDHC_02185 8.7e-66 2.7.1.191 G PTS system fructose IIA component
PMIFDDHC_02186 0.0 3.6.3.8 P P-type ATPase
PMIFDDHC_02187 4.9e-125
PMIFDDHC_02188 1.2e-241 S response to antibiotic

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)