ORF_ID e_value Gene_name EC_number CAZy COGs Description
KDLFIFCD_00001 6e-29 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
KDLFIFCD_00002 2.4e-133 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
KDLFIFCD_00003 2.2e-85 S ECF transporter, substrate-specific component
KDLFIFCD_00004 1.4e-130 fat 3.1.2.21 I Acyl-ACP thioesterase
KDLFIFCD_00005 5.1e-156 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
KDLFIFCD_00006 1.8e-59 yabA L Involved in initiation control of chromosome replication
KDLFIFCD_00007 1.5e-155 holB 2.7.7.7 L DNA polymerase III
KDLFIFCD_00008 2e-52 yaaQ S Cyclic-di-AMP receptor
KDLFIFCD_00009 1.6e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
KDLFIFCD_00010 1.1e-34 S Protein of unknown function (DUF2508)
KDLFIFCD_00011 1.6e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
KDLFIFCD_00012 8.2e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
KDLFIFCD_00013 1.2e-35 M lipopolysaccharide 3-alpha-galactosyltransferase activity
KDLFIFCD_00014 5.7e-106 2.4.1.58 GT8 M family 8
KDLFIFCD_00015 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
KDLFIFCD_00016 2.2e-90 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
KDLFIFCD_00017 9e-26
KDLFIFCD_00018 1.3e-116 rsmC 2.1.1.172 J Methyltransferase
KDLFIFCD_00019 8.7e-140 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
KDLFIFCD_00020 1.8e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
KDLFIFCD_00021 7e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
KDLFIFCD_00022 1.5e-11 GT2,GT4 M family 8
KDLFIFCD_00023 7.8e-140 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
KDLFIFCD_00024 3.6e-111 G Phosphoglycerate mutase family
KDLFIFCD_00025 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
KDLFIFCD_00026 4.2e-150 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
KDLFIFCD_00027 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
KDLFIFCD_00028 7.2e-56 yheA S Belongs to the UPF0342 family
KDLFIFCD_00029 1e-226 yhaO L Ser Thr phosphatase family protein
KDLFIFCD_00030 0.0 L AAA domain
KDLFIFCD_00031 1.9e-186 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
KDLFIFCD_00032 2.9e-23
KDLFIFCD_00033 2.4e-51 S Domain of unknown function DUF1829
KDLFIFCD_00034 1.1e-265
KDLFIFCD_00035 1.9e-72 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
KDLFIFCD_00036 4.3e-153 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
KDLFIFCD_00037 3.9e-25
KDLFIFCD_00038 8.3e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
KDLFIFCD_00039 5.7e-135 ecsA V ABC transporter, ATP-binding protein
KDLFIFCD_00040 6.5e-221 ecsB U ABC transporter
KDLFIFCD_00041 3.3e-126 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
KDLFIFCD_00043 2.8e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
KDLFIFCD_00044 1.4e-122 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
KDLFIFCD_00045 9.7e-247 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
KDLFIFCD_00046 6.9e-218 mepA V MATE efflux family protein
KDLFIFCD_00047 1.8e-176 S SLAP domain
KDLFIFCD_00048 4.4e-283 M Peptidase family M1 domain
KDLFIFCD_00049 4.5e-188 S Bacteriocin helveticin-J
KDLFIFCD_00050 8e-51 L RelB antitoxin
KDLFIFCD_00051 7.4e-105 qmcA O prohibitin homologues
KDLFIFCD_00052 3.5e-25 qmcA O prohibitin homologues
KDLFIFCD_00053 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
KDLFIFCD_00054 4.2e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
KDLFIFCD_00055 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
KDLFIFCD_00056 3.5e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
KDLFIFCD_00057 5.1e-251 dnaB L Replication initiation and membrane attachment
KDLFIFCD_00058 2.1e-168 dnaI L Primosomal protein DnaI
KDLFIFCD_00059 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
KDLFIFCD_00060 1.2e-74
KDLFIFCD_00061 3e-37
KDLFIFCD_00062 2.4e-110 K WHG domain
KDLFIFCD_00063 6.4e-96 nqr 1.5.1.36 S NADPH-dependent FMN reductase
KDLFIFCD_00064 2e-97 azr 1.5.1.36 S NADPH-dependent FMN reductase
KDLFIFCD_00065 6e-151 3.1.3.48 T Tyrosine phosphatase family
KDLFIFCD_00066 2.5e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
KDLFIFCD_00068 3e-53 cvpA S Colicin V production protein
KDLFIFCD_00069 5.5e-148 S cog cog1373
KDLFIFCD_00070 0.0 4.2.1.53 S Myosin-crossreactive antigen
KDLFIFCD_00071 2e-91 yxdD K Bacterial regulatory proteins, tetR family
KDLFIFCD_00072 1.9e-259 emrY EGP Major facilitator Superfamily
KDLFIFCD_00077 1.1e-94 MA20_25245 K Acetyltransferase (GNAT) domain
KDLFIFCD_00078 4.9e-254 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
KDLFIFCD_00079 6.3e-201 pbpX V Beta-lactamase
KDLFIFCD_00080 2.8e-244 nhaC C Na H antiporter NhaC
KDLFIFCD_00081 3.2e-135 I transferase activity, transferring acyl groups other than amino-acyl groups
KDLFIFCD_00082 2.6e-57
KDLFIFCD_00083 4.3e-108 ybhL S Belongs to the BI1 family
KDLFIFCD_00084 2.7e-171 yegS 2.7.1.107 G Lipid kinase
KDLFIFCD_00085 2.7e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
KDLFIFCD_00086 2.9e-268 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
KDLFIFCD_00087 1.5e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
KDLFIFCD_00088 5.8e-203 camS S sex pheromone
KDLFIFCD_00089 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
KDLFIFCD_00090 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
KDLFIFCD_00091 5.2e-84 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
KDLFIFCD_00093 4.1e-83 ydcK S Belongs to the SprT family
KDLFIFCD_00094 7.7e-134 M Glycosyltransferase sugar-binding region containing DXD motif
KDLFIFCD_00095 6e-258 epsU S Polysaccharide biosynthesis protein
KDLFIFCD_00096 7e-225 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
KDLFIFCD_00097 0.0 pacL 3.6.3.8 P P-type ATPase
KDLFIFCD_00098 1.4e-204 tnpB L Putative transposase DNA-binding domain
KDLFIFCD_00099 3.3e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
KDLFIFCD_00100 2.4e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
KDLFIFCD_00101 1.7e-204 csaB M Glycosyl transferases group 1
KDLFIFCD_00102 2.1e-134 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
KDLFIFCD_00103 5.1e-71 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
KDLFIFCD_00104 1.3e-125 gntR1 K UTRA
KDLFIFCD_00105 3.3e-179
KDLFIFCD_00106 3.4e-45 oppA2 E ABC transporter, substratebinding protein
KDLFIFCD_00107 4.4e-239 oppA2 E ABC transporter, substratebinding protein
KDLFIFCD_00110 3.2e-240 npr 1.11.1.1 C NADH oxidase
KDLFIFCD_00111 6.6e-11
KDLFIFCD_00112 1.3e-22 3.6.4.12 S transposase or invertase
KDLFIFCD_00113 6.7e-228 slpX S SLAP domain
KDLFIFCD_00114 4.4e-144 K SIS domain
KDLFIFCD_00115 8.1e-120 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
KDLFIFCD_00116 2.7e-185 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
KDLFIFCD_00117 6.5e-210 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
KDLFIFCD_00119 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
KDLFIFCD_00121 1.2e-115 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
KDLFIFCD_00122 6.6e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
KDLFIFCD_00123 2.6e-89 G Histidine phosphatase superfamily (branch 1)
KDLFIFCD_00124 1.2e-105 G Phosphoglycerate mutase family
KDLFIFCD_00125 3.1e-158 D nuclear chromosome segregation
KDLFIFCD_00126 5.8e-78 M LysM domain protein
KDLFIFCD_00127 2.8e-86 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
KDLFIFCD_00128 4.1e-78 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
KDLFIFCD_00129 1.5e-16 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
KDLFIFCD_00130 6.2e-12
KDLFIFCD_00131 2.3e-172 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
KDLFIFCD_00132 2.3e-30
KDLFIFCD_00134 2.9e-69 S Iron-sulphur cluster biosynthesis
KDLFIFCD_00135 6.5e-113 yncA 2.3.1.79 S Maltose acetyltransferase
KDLFIFCD_00136 6.2e-59 psiE S Phosphate-starvation-inducible E
KDLFIFCD_00138 4.4e-135 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
KDLFIFCD_00139 4.3e-228 amtB P ammonium transporter
KDLFIFCD_00140 1.4e-60
KDLFIFCD_00141 0.0 lhr L DEAD DEAH box helicase
KDLFIFCD_00142 1.4e-245 P P-loop Domain of unknown function (DUF2791)
KDLFIFCD_00143 2.6e-138 S TerB-C domain
KDLFIFCD_00144 2.6e-61 M Glycosyl hydrolases family 25
KDLFIFCD_00145 1.3e-61 M Glycosyl hydrolases family 25
KDLFIFCD_00146 2.8e-211 yfmL 3.6.4.13 L DEAD DEAH box helicase
KDLFIFCD_00147 4.7e-249 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
KDLFIFCD_00149 2e-216 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
KDLFIFCD_00150 2.2e-200 L Transposase DDE domain
KDLFIFCD_00151 7e-87 gtcA S Teichoic acid glycosylation protein
KDLFIFCD_00152 4.1e-80 fld C Flavodoxin
KDLFIFCD_00153 1.4e-163 map 3.4.11.18 E Methionine Aminopeptidase
KDLFIFCD_00154 3.6e-163 yihY S Belongs to the UPF0761 family
KDLFIFCD_00155 2.1e-168 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
KDLFIFCD_00156 2.5e-214 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
KDLFIFCD_00157 3.6e-215 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
KDLFIFCD_00158 7e-43 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
KDLFIFCD_00159 6.6e-182 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
KDLFIFCD_00160 3.4e-284 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
KDLFIFCD_00161 0.0 uup S ABC transporter, ATP-binding protein
KDLFIFCD_00162 5.8e-112 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
KDLFIFCD_00163 3.2e-10 S Domain of unknown function DUF87
KDLFIFCD_00164 9.5e-64 S SIR2-like domain
KDLFIFCD_00165 5.7e-99 3.1.21.3 V Type I restriction modification DNA specificity domain
KDLFIFCD_00166 1.9e-259 hsdM 2.1.1.72 V type I restriction-modification system
KDLFIFCD_00167 3.4e-42 S RloB-like protein
KDLFIFCD_00168 1.2e-164 S AAA domain, putative AbiEii toxin, Type IV TA system
KDLFIFCD_00169 0.0 hsdR 3.1.21.3 L DEAD/DEAH box helicase
KDLFIFCD_00170 0.0 S SLAP domain
KDLFIFCD_00172 1.1e-236 XK27_01810 S Calcineurin-like phosphoesterase
KDLFIFCD_00173 1e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
KDLFIFCD_00174 1.9e-37 G Bacterial extracellular solute-binding protein
KDLFIFCD_00175 7.1e-19
KDLFIFCD_00177 1e-180 M Glycosyl hydrolases family 25
KDLFIFCD_00178 7.7e-30
KDLFIFCD_00179 2e-17
KDLFIFCD_00181 8.1e-08
KDLFIFCD_00182 1.1e-18 S Phage uncharacterised protein (Phage_XkdX)
KDLFIFCD_00183 2e-23
KDLFIFCD_00189 2.2e-34
KDLFIFCD_00190 1.4e-09
KDLFIFCD_00191 3.9e-114 Z012_12235 S Baseplate J-like protein
KDLFIFCD_00192 6.4e-31
KDLFIFCD_00193 1.2e-37
KDLFIFCD_00194 9.6e-102
KDLFIFCD_00195 2.3e-45
KDLFIFCD_00196 1.3e-59 M LysM domain
KDLFIFCD_00197 2.5e-227 3.4.14.13 M Phage tail tape measure protein TP901
KDLFIFCD_00199 2.9e-09
KDLFIFCD_00200 4.2e-29
KDLFIFCD_00201 9.2e-104 Z012_02110 S Protein of unknown function (DUF3383)
KDLFIFCD_00202 2.5e-31
KDLFIFCD_00203 3.9e-24
KDLFIFCD_00204 6.5e-29
KDLFIFCD_00205 9.2e-20 S Protein of unknown function (DUF4054)
KDLFIFCD_00206 3.7e-94 Z012_11565 S Uncharacterized protein conserved in bacteria (DUF2184)
KDLFIFCD_00207 1.8e-34
KDLFIFCD_00208 1.6e-57 S Uncharacterized protein conserved in bacteria (DUF2213)
KDLFIFCD_00209 6.5e-12 S Lysin motif
KDLFIFCD_00210 1.3e-47 S Phage Mu protein F like protein
KDLFIFCD_00211 1.4e-134 S Protein of unknown function (DUF1073)
KDLFIFCD_00212 4.1e-201 S Terminase-like family
KDLFIFCD_00213 4e-19 ps333 L Terminase small subunit
KDLFIFCD_00216 3.3e-09 arpU S Phage transcriptional regulator, ArpU family
KDLFIFCD_00219 3.2e-218 XK27_11280 S Psort location CytoplasmicMembrane, score
KDLFIFCD_00221 5.5e-49 S VRR_NUC
KDLFIFCD_00233 5.8e-20 L Psort location Cytoplasmic, score
KDLFIFCD_00234 2.1e-42 S Protein of unknown function (DUF1071)
KDLFIFCD_00236 7.7e-48
KDLFIFCD_00239 6.8e-08
KDLFIFCD_00241 3.1e-88 S AntA/AntB antirepressor
KDLFIFCD_00243 3.7e-13
KDLFIFCD_00244 3.1e-12
KDLFIFCD_00245 3.7e-18 ps115 K sequence-specific DNA binding
KDLFIFCD_00246 3e-14 S Pfam:Peptidase_M78
KDLFIFCD_00247 1.2e-54 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
KDLFIFCD_00248 4.8e-12
KDLFIFCD_00252 6.3e-176 sip L Belongs to the 'phage' integrase family
KDLFIFCD_00253 2e-183 G Bacterial extracellular solute-binding protein
KDLFIFCD_00254 6.3e-17
KDLFIFCD_00255 2.5e-287 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
KDLFIFCD_00256 8.9e-101 treR K UTRA
KDLFIFCD_00257 1.5e-283 treB G phosphotransferase system
KDLFIFCD_00258 8.2e-64 spxA_2 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
KDLFIFCD_00259 1.9e-191 yrvN L AAA C-terminal domain
KDLFIFCD_00260 2.2e-251 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
KDLFIFCD_00261 9e-83 K Acetyltransferase (GNAT) domain
KDLFIFCD_00262 1.3e-229 S Putative peptidoglycan binding domain
KDLFIFCD_00263 7.5e-95 S ECF-type riboflavin transporter, S component
KDLFIFCD_00264 2.8e-98 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
KDLFIFCD_00265 9.3e-204 pbpX1 V Beta-lactamase
KDLFIFCD_00266 1.4e-115 lacA 2.3.1.79 S Transferase hexapeptide repeat
KDLFIFCD_00267 1.9e-80 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
KDLFIFCD_00268 7.4e-205 L COG2826 Transposase and inactivated derivatives, IS30 family
KDLFIFCD_00269 2.1e-114 3.6.1.27 I Acid phosphatase homologues
KDLFIFCD_00270 1.1e-189 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
KDLFIFCD_00271 0.0 uvrA3 L excinuclease ABC, A subunit
KDLFIFCD_00272 9.9e-82 C Flavodoxin
KDLFIFCD_00273 3.4e-129 S (CBS) domain
KDLFIFCD_00274 1.5e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
KDLFIFCD_00275 5.1e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
KDLFIFCD_00276 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
KDLFIFCD_00277 7.4e-40 yabO J S4 domain protein
KDLFIFCD_00278 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
KDLFIFCD_00279 8.4e-287 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
KDLFIFCD_00280 1.7e-34
KDLFIFCD_00281 1.2e-94 sigH K Belongs to the sigma-70 factor family
KDLFIFCD_00282 1.7e-139 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
KDLFIFCD_00283 5.1e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
KDLFIFCD_00284 7.5e-277 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
KDLFIFCD_00285 1.6e-290 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
KDLFIFCD_00286 2.3e-254 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
KDLFIFCD_00287 1.8e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
KDLFIFCD_00288 4.1e-52
KDLFIFCD_00289 1e-267 pepC 3.4.22.40 E Peptidase C1-like family
KDLFIFCD_00290 7.3e-44
KDLFIFCD_00291 2.4e-183 S AAA domain
KDLFIFCD_00292 3.4e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
KDLFIFCD_00293 1.4e-23
KDLFIFCD_00294 7.3e-161 czcD P cation diffusion facilitator family transporter
KDLFIFCD_00295 3.7e-125 gpmB G Belongs to the phosphoglycerate mutase family
KDLFIFCD_00296 6e-132 S membrane transporter protein
KDLFIFCD_00297 1.9e-118 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
KDLFIFCD_00298 6.3e-105 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
KDLFIFCD_00299 1.2e-49 S Protein of unknown function (DUF3021)
KDLFIFCD_00300 2.8e-65 K LytTr DNA-binding domain
KDLFIFCD_00301 9.1e-54 papP P ABC transporter, permease protein
KDLFIFCD_00302 5.3e-116 P ABC transporter permease
KDLFIFCD_00303 1.5e-127 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
KDLFIFCD_00304 6.8e-156 cjaA ET ABC transporter substrate-binding protein
KDLFIFCD_00305 7.1e-200 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
KDLFIFCD_00306 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
KDLFIFCD_00307 2e-61 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
KDLFIFCD_00308 4.3e-169 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
KDLFIFCD_00309 7.1e-158 metQ1 P Belongs to the nlpA lipoprotein family
KDLFIFCD_00310 1.9e-25
KDLFIFCD_00311 0.0 mco Q Multicopper oxidase
KDLFIFCD_00312 1.2e-151 S Sucrose-6F-phosphate phosphohydrolase
KDLFIFCD_00313 0.0 oppA E ABC transporter
KDLFIFCD_00314 3.2e-228 Q Imidazolonepropionase and related amidohydrolases
KDLFIFCD_00315 2.7e-246 3.5.1.47 S Peptidase dimerisation domain
KDLFIFCD_00316 1e-137 S Protein of unknown function (DUF3100)
KDLFIFCD_00317 9.7e-83 S An automated process has identified a potential problem with this gene model
KDLFIFCD_00318 1.1e-183 scrR K helix_turn _helix lactose operon repressor
KDLFIFCD_00319 3.7e-295 scrB 3.2.1.26 GH32 G invertase
KDLFIFCD_00320 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
KDLFIFCD_00321 2.3e-181 M CHAP domain
KDLFIFCD_00322 3.5e-75
KDLFIFCD_00323 1.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
KDLFIFCD_00324 5.9e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
KDLFIFCD_00325 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
KDLFIFCD_00326 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
KDLFIFCD_00327 1.7e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
KDLFIFCD_00328 1.5e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
KDLFIFCD_00329 9.6e-41 yajC U Preprotein translocase
KDLFIFCD_00330 9.6e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
KDLFIFCD_00331 6.2e-210 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
KDLFIFCD_00332 1.4e-181 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
KDLFIFCD_00333 5.2e-227 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
KDLFIFCD_00334 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
KDLFIFCD_00335 2e-42 yrzL S Belongs to the UPF0297 family
KDLFIFCD_00336 6.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
KDLFIFCD_00337 1.1e-50 yrzB S Belongs to the UPF0473 family
KDLFIFCD_00338 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
KDLFIFCD_00339 3.5e-54 trxA O Belongs to the thioredoxin family
KDLFIFCD_00367 7.9e-224 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
KDLFIFCD_00368 7.6e-202 cpoA GT4 M Glycosyltransferase, group 1 family protein
KDLFIFCD_00369 1.4e-176 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
KDLFIFCD_00370 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
KDLFIFCD_00371 1.7e-29 secG U Preprotein translocase
KDLFIFCD_00372 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
KDLFIFCD_00373 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
KDLFIFCD_00374 8.3e-210 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
KDLFIFCD_00375 1.1e-146 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
KDLFIFCD_00376 8.9e-187 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
KDLFIFCD_00377 2.7e-199 oppD P Belongs to the ABC transporter superfamily
KDLFIFCD_00378 1.9e-175 oppF P Belongs to the ABC transporter superfamily
KDLFIFCD_00379 1.4e-256 pepC 3.4.22.40 E aminopeptidase
KDLFIFCD_00380 3.9e-72 hsp O Belongs to the small heat shock protein (HSP20) family
KDLFIFCD_00381 1.3e-28 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
KDLFIFCD_00382 2.9e-109 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
KDLFIFCD_00383 1.7e-36 axe1 3.1.1.41 Q Acetyl xylan esterase (AXE1)
KDLFIFCD_00384 1.1e-59 axe1 3.1.1.41 Q Acetyl xylan esterase (AXE1)
KDLFIFCD_00385 1e-220 nanT E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
KDLFIFCD_00386 1.9e-121 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
KDLFIFCD_00387 2.3e-56 G Xylose isomerase domain protein TIM barrel
KDLFIFCD_00388 8.4e-90 nanK GK ROK family
KDLFIFCD_00389 2.9e-122 nanA 4.1.3.3, 4.3.3.7 EM Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
KDLFIFCD_00390 3.7e-66 K Helix-turn-helix domain, rpiR family
KDLFIFCD_00391 7.1e-263 E ABC transporter, substratebinding protein
KDLFIFCD_00392 9.1e-10 K peptidyl-tyrosine sulfation
KDLFIFCD_00394 1.2e-128 S interspecies interaction between organisms
KDLFIFCD_00395 2.7e-34
KDLFIFCD_00398 1.9e-21
KDLFIFCD_00399 6e-148
KDLFIFCD_00400 1.5e-169
KDLFIFCD_00401 2e-263 glnA 6.3.1.2 E glutamine synthetase
KDLFIFCD_00402 7.6e-225 ynbB 4.4.1.1 P aluminum resistance
KDLFIFCD_00403 1.5e-167 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
KDLFIFCD_00404 1.5e-65 yqhL P Rhodanese-like protein
KDLFIFCD_00405 9.7e-36 yqgQ S Bacterial protein of unknown function (DUF910)
KDLFIFCD_00406 4e-119 gluP 3.4.21.105 S Rhomboid family
KDLFIFCD_00407 2.7e-97 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
KDLFIFCD_00408 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
KDLFIFCD_00409 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
KDLFIFCD_00410 0.0 S membrane
KDLFIFCD_00411 5.2e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
KDLFIFCD_00412 1.3e-38 S RelB antitoxin
KDLFIFCD_00413 3.4e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
KDLFIFCD_00414 6.7e-44 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
KDLFIFCD_00415 6.7e-139 fhuC 3.6.3.34 HP abc transporter atp-binding protein
KDLFIFCD_00416 9.5e-148 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
KDLFIFCD_00417 8.7e-159 isdE P Periplasmic binding protein
KDLFIFCD_00418 6.3e-123 M Iron Transport-associated domain
KDLFIFCD_00419 3e-09 isdH M Iron Transport-associated domain
KDLFIFCD_00420 8.4e-89
KDLFIFCD_00421 6.4e-113 S SLAP domain
KDLFIFCD_00422 1.2e-51 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
KDLFIFCD_00423 9.2e-262 emrY EGP Major facilitator Superfamily
KDLFIFCD_00424 8.8e-90 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
KDLFIFCD_00425 7.6e-239 pyrP F Permease
KDLFIFCD_00426 1.9e-22 K Putative DNA-binding domain
KDLFIFCD_00427 2.3e-93 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
KDLFIFCD_00428 5.7e-103 3.2.2.20 K acetyltransferase
KDLFIFCD_00430 4.3e-226 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
KDLFIFCD_00431 4.9e-82 rarA L MgsA AAA+ ATPase C terminal
KDLFIFCD_00432 4.1e-21 K Helix-turn-helix domain, rpiR family
KDLFIFCD_00433 1.3e-71 K Helix-turn-helix domain, rpiR family
KDLFIFCD_00434 9.7e-136 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
KDLFIFCD_00435 5.4e-242 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
KDLFIFCD_00436 1.7e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
KDLFIFCD_00437 3.2e-278 yjeM E Amino Acid
KDLFIFCD_00438 4.5e-49 S Fic/DOC family
KDLFIFCD_00439 2.8e-08 S Fic/DOC family
KDLFIFCD_00440 3.1e-278
KDLFIFCD_00441 3.2e-77
KDLFIFCD_00442 2.3e-87 S Protein of unknown function (DUF805)
KDLFIFCD_00443 5.6e-68 O OsmC-like protein
KDLFIFCD_00444 6.7e-207 EGP Major facilitator Superfamily
KDLFIFCD_00445 2.6e-141 sptS 2.7.13.3 T Histidine kinase
KDLFIFCD_00446 5.9e-57 sptS 2.7.13.3 T Histidine kinase
KDLFIFCD_00447 1.3e-65 K response regulator
KDLFIFCD_00448 6e-27 K response regulator
KDLFIFCD_00449 7.5e-109 2.7.6.5 T Region found in RelA / SpoT proteins
KDLFIFCD_00450 6.2e-271 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
KDLFIFCD_00451 0.0 rafA 3.2.1.22 G alpha-galactosidase
KDLFIFCD_00452 2.8e-210 msmX P Belongs to the ABC transporter superfamily
KDLFIFCD_00453 2e-152 msmG P Binding-protein-dependent transport system inner membrane component
KDLFIFCD_00454 4.8e-157 msmF P Binding-protein-dependent transport system inner membrane component
KDLFIFCD_00455 3.2e-172 msmE G Bacterial extracellular solute-binding protein
KDLFIFCD_00456 4.9e-35 msmE G Bacterial extracellular solute-binding protein
KDLFIFCD_00457 1.6e-158 scrR K Periplasmic binding protein domain
KDLFIFCD_00458 5.5e-36
KDLFIFCD_00459 8.3e-198 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
KDLFIFCD_00460 1.8e-200 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
KDLFIFCD_00461 2.2e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
KDLFIFCD_00462 2.6e-214 yubA S AI-2E family transporter
KDLFIFCD_00463 4.2e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
KDLFIFCD_00464 1.7e-69 WQ51_03320 S Protein of unknown function (DUF1149)
KDLFIFCD_00465 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
KDLFIFCD_00466 9e-223 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
KDLFIFCD_00467 1.9e-236 S Peptidase M16
KDLFIFCD_00468 2.3e-133 IQ Enoyl-(Acyl carrier protein) reductase
KDLFIFCD_00469 5.2e-97 ymfM S Helix-turn-helix domain
KDLFIFCD_00470 1.1e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
KDLFIFCD_00471 4.2e-195 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
KDLFIFCD_00472 7.4e-220 rny S Endoribonuclease that initiates mRNA decay
KDLFIFCD_00473 1.3e-210 tagO 2.7.8.33, 2.7.8.35 M transferase
KDLFIFCD_00474 5.1e-119 yvyE 3.4.13.9 S YigZ family
KDLFIFCD_00475 4.7e-246 comFA L Helicase C-terminal domain protein
KDLFIFCD_00476 9.4e-132 comFC S Competence protein
KDLFIFCD_00477 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
KDLFIFCD_00478 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
KDLFIFCD_00479 4.6e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
KDLFIFCD_00480 5.1e-17
KDLFIFCD_00481 5.8e-180 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
KDLFIFCD_00482 9.2e-158 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
KDLFIFCD_00483 1.1e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
KDLFIFCD_00484 3.9e-181 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
KDLFIFCD_00485 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
KDLFIFCD_00486 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
KDLFIFCD_00487 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
KDLFIFCD_00488 9.1e-90 S Short repeat of unknown function (DUF308)
KDLFIFCD_00489 6.2e-165 rapZ S Displays ATPase and GTPase activities
KDLFIFCD_00490 4e-195 ybhK S Required for morphogenesis under gluconeogenic growth conditions
KDLFIFCD_00491 2.1e-171 whiA K May be required for sporulation
KDLFIFCD_00492 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
KDLFIFCD_00493 0.0 S SH3-like domain
KDLFIFCD_00494 4.9e-111 ybbL S ABC transporter, ATP-binding protein
KDLFIFCD_00495 2.5e-130 ybbM S Uncharacterised protein family (UPF0014)
KDLFIFCD_00496 1.2e-94
KDLFIFCD_00497 3.4e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
KDLFIFCD_00498 9.7e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
KDLFIFCD_00499 4.1e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
KDLFIFCD_00500 7e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
KDLFIFCD_00501 4e-98 dnaQ 2.7.7.7 L DNA polymerase III
KDLFIFCD_00502 2e-163 murB 1.3.1.98 M Cell wall formation
KDLFIFCD_00503 1.8e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
KDLFIFCD_00504 1.3e-129 potB P ABC transporter permease
KDLFIFCD_00505 4.8e-127 potC P ABC transporter permease
KDLFIFCD_00506 7.3e-208 potD P ABC transporter
KDLFIFCD_00507 6.4e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
KDLFIFCD_00508 2e-172 ybbR S YbbR-like protein
KDLFIFCD_00509 4.5e-255 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
KDLFIFCD_00510 1.4e-147 S hydrolase
KDLFIFCD_00511 1.8e-75 K Penicillinase repressor
KDLFIFCD_00512 1.6e-118
KDLFIFCD_00513 7.4e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
KDLFIFCD_00514 3.8e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
KDLFIFCD_00515 8.3e-143 licT K CAT RNA binding domain
KDLFIFCD_00516 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
KDLFIFCD_00517 1e-297 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
KDLFIFCD_00518 1e-149 D Alpha beta
KDLFIFCD_00519 1.2e-92 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
KDLFIFCD_00520 3.7e-26 queD 4.1.2.50, 4.2.3.12 H 6-pyruvoyl tetrahydropterin synthase
KDLFIFCD_00521 5.2e-112 ica2 GT2 M Glycosyl transferase family group 2
KDLFIFCD_00522 8.2e-36
KDLFIFCD_00523 2.2e-90 2.7.7.65 T GGDEF domain
KDLFIFCD_00524 8.8e-82 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
KDLFIFCD_00526 2e-310 E Amino acid permease
KDLFIFCD_00527 5.8e-100 L Helix-turn-helix domain
KDLFIFCD_00528 1.3e-160 L hmm pf00665
KDLFIFCD_00530 3.7e-27 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
KDLFIFCD_00531 3.5e-101 ylbE GM NAD(P)H-binding
KDLFIFCD_00532 7.6e-94 S VanZ like family
KDLFIFCD_00533 8.9e-133 yebC K Transcriptional regulatory protein
KDLFIFCD_00534 1.7e-179 comGA NU Type II IV secretion system protein
KDLFIFCD_00535 1.7e-171 comGB NU type II secretion system
KDLFIFCD_00536 3.1e-43 comGC U competence protein ComGC
KDLFIFCD_00537 1.8e-69
KDLFIFCD_00538 2.3e-41
KDLFIFCD_00539 3.8e-77 comGF U Putative Competence protein ComGF
KDLFIFCD_00540 4.7e-172 V ABC-type multidrug transport system, ATPase and permease components
KDLFIFCD_00541 1.5e-64 arsC 1.20.4.1 P Belongs to the ArsC family
KDLFIFCD_00542 1.5e-177 I Carboxylesterase family
KDLFIFCD_00544 1.7e-205 M Glycosyl hydrolases family 25
KDLFIFCD_00545 1.3e-157 cinI S Serine hydrolase (FSH1)
KDLFIFCD_00546 2.7e-300 S Predicted membrane protein (DUF2207)
KDLFIFCD_00547 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
KDLFIFCD_00549 7.8e-255 S Uncharacterized protein conserved in bacteria (DUF2325)
KDLFIFCD_00550 3.7e-151 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
KDLFIFCD_00551 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
KDLFIFCD_00552 1.3e-47 rpmA J Belongs to the bacterial ribosomal protein bL27 family
KDLFIFCD_00553 1e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
KDLFIFCD_00554 4.9e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
KDLFIFCD_00555 3.4e-71 yqhY S Asp23 family, cell envelope-related function
KDLFIFCD_00556 1.1e-63 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
KDLFIFCD_00557 6.7e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
KDLFIFCD_00558 2.9e-193 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
KDLFIFCD_00559 3.7e-35 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
KDLFIFCD_00560 3.9e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
KDLFIFCD_00561 2.3e-153 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
KDLFIFCD_00562 2.6e-300 recN L May be involved in recombinational repair of damaged DNA
KDLFIFCD_00563 1.1e-77 6.3.3.2 S ASCH
KDLFIFCD_00564 2.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
KDLFIFCD_00565 1.1e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
KDLFIFCD_00566 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
KDLFIFCD_00567 5.7e-172 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
KDLFIFCD_00568 1.6e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
KDLFIFCD_00569 1.1e-138 stp 3.1.3.16 T phosphatase
KDLFIFCD_00570 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
KDLFIFCD_00571 4.5e-163 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
KDLFIFCD_00572 2.9e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
KDLFIFCD_00573 4.1e-124 thiN 2.7.6.2 H thiamine pyrophosphokinase
KDLFIFCD_00574 1.4e-30
KDLFIFCD_00575 9.9e-118 L Belongs to the 'phage' integrase family
KDLFIFCD_00577 2.2e-15 E Pfam:DUF955
KDLFIFCD_00579 4.7e-18 K Helix-turn-helix XRE-family like proteins
KDLFIFCD_00580 4.4e-79 S Phage antirepressor protein KilAC domain
KDLFIFCD_00581 3.5e-46
KDLFIFCD_00587 1.1e-36 S AAA domain
KDLFIFCD_00590 4.4e-17 CO COG0526, thiol-disulfide isomerase and thioredoxins
KDLFIFCD_00593 1.2e-32 M Peptidase family M23
KDLFIFCD_00594 1.8e-159 trsE S COG0433 Predicted ATPase
KDLFIFCD_00595 4.9e-15
KDLFIFCD_00597 1e-32 I mechanosensitive ion channel activity
KDLFIFCD_00598 1.2e-140 U TraM recognition site of TraD and TraG
KDLFIFCD_00602 6.6e-38 M domain protein
KDLFIFCD_00603 1.6e-42 M domain protein
KDLFIFCD_00605 1.4e-24 srtA 3.4.22.70 M sortase family
KDLFIFCD_00606 1.8e-21 S SLAP domain
KDLFIFCD_00611 2.6e-11 ssb L Single-strand binding protein family
KDLFIFCD_00619 3.2e-24 S Domain of unknown function (DUF771)
KDLFIFCD_00620 8.9e-32 K Helix-turn-helix domain
KDLFIFCD_00621 1.2e-21 XK27_07105 K Helix-turn-helix XRE-family like proteins
KDLFIFCD_00622 1.2e-23 K Helix-turn-helix domain
KDLFIFCD_00623 5e-08 S Pfam:DUF955
KDLFIFCD_00624 1.4e-153 L Belongs to the 'phage' integrase family
KDLFIFCD_00626 1.8e-220 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
KDLFIFCD_00627 1.9e-186 ytxK 2.1.1.72 L N-6 DNA Methylase
KDLFIFCD_00628 6e-85 hipB K Helix-turn-helix
KDLFIFCD_00629 1.4e-15 S cog cog1373
KDLFIFCD_00630 1e-30 S cog cog1373
KDLFIFCD_00631 7.6e-91 F Nucleoside 2-deoxyribosyltransferase
KDLFIFCD_00632 3.3e-261 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
KDLFIFCD_00633 1.1e-141 yfeO P Voltage gated chloride channel
KDLFIFCD_00634 1.4e-184 5.3.3.2 C FMN-dependent dehydrogenase
KDLFIFCD_00635 1.4e-51
KDLFIFCD_00636 2.1e-42
KDLFIFCD_00637 6.4e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
KDLFIFCD_00638 1.1e-295 ybeC E amino acid
KDLFIFCD_00639 2.6e-157 S Sucrose-6F-phosphate phosphohydrolase
KDLFIFCD_00640 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
KDLFIFCD_00641 2.5e-39 rpmE2 J Ribosomal protein L31
KDLFIFCD_00642 8e-260 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
KDLFIFCD_00643 4e-249 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
KDLFIFCD_00644 1.7e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
KDLFIFCD_00645 1e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
KDLFIFCD_00646 9.7e-46 oppA E ABC transporter substrate-binding protein
KDLFIFCD_00647 5.6e-132 oppC P Binding-protein-dependent transport system inner membrane component
KDLFIFCD_00648 2.6e-172 oppB P ABC transporter permease
KDLFIFCD_00649 1.5e-170 oppF P Belongs to the ABC transporter superfamily
KDLFIFCD_00650 1.1e-192 oppD P Belongs to the ABC transporter superfamily
KDLFIFCD_00651 4.9e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
KDLFIFCD_00652 3.7e-182 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
KDLFIFCD_00653 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
KDLFIFCD_00654 7.6e-305 yloV S DAK2 domain fusion protein YloV
KDLFIFCD_00655 4e-57 asp S Asp23 family, cell envelope-related function
KDLFIFCD_00656 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
KDLFIFCD_00658 4e-87 M hydrolase, family 25
KDLFIFCD_00659 7.6e-39 S Bacteriophage holin of superfamily 6 (Holin_LLH)
KDLFIFCD_00668 6e-136 S Phage minor structural protein
KDLFIFCD_00669 4.5e-34 S phage tail
KDLFIFCD_00670 8.1e-129 M Phage tail tape measure protein TP901
KDLFIFCD_00673 3.1e-13 S Pfam:Phage_TTP_1
KDLFIFCD_00675 8.6e-14 S Bacteriophage HK97-gp10, putative tail-component
KDLFIFCD_00677 5.2e-17 S Phage gp6-like head-tail connector protein
KDLFIFCD_00678 2e-55 S Phage capsid family
KDLFIFCD_00679 5.5e-87 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
KDLFIFCD_00680 9.1e-135 S Phage portal protein
KDLFIFCD_00682 2.8e-210 S Phage Terminase
KDLFIFCD_00683 9e-47 S HicB_like antitoxin of bacterial toxin-antitoxin system
KDLFIFCD_00684 3.4e-18 N HicA toxin of bacterial toxin-antitoxin,
KDLFIFCD_00685 1.6e-55 L Phage terminase, small subunit
KDLFIFCD_00686 2.1e-49 S HNH endonuclease
KDLFIFCD_00688 1.2e-13 arpU S Phage transcriptional regulator, ArpU family
KDLFIFCD_00689 2.7e-268 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
KDLFIFCD_00690 5.3e-136 glvR K Helix-turn-helix domain, rpiR family
KDLFIFCD_00691 9.4e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
KDLFIFCD_00692 5.9e-09
KDLFIFCD_00693 4.4e-43
KDLFIFCD_00694 8.7e-66 2.7.1.191 G PTS system fructose IIA component
KDLFIFCD_00695 0.0 3.6.3.8 P P-type ATPase
KDLFIFCD_00696 4.9e-125
KDLFIFCD_00697 1.2e-241 S response to antibiotic
KDLFIFCD_00698 6.2e-276 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
KDLFIFCD_00699 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
KDLFIFCD_00700 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
KDLFIFCD_00701 2.1e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
KDLFIFCD_00702 8.4e-146 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
KDLFIFCD_00703 3.5e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
KDLFIFCD_00704 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
KDLFIFCD_00705 6.8e-60 divIC D Septum formation initiator
KDLFIFCD_00706 1.8e-62 yabR J S1 RNA binding domain
KDLFIFCD_00707 2.6e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
KDLFIFCD_00708 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
KDLFIFCD_00709 9.7e-166 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
KDLFIFCD_00710 2e-194 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
KDLFIFCD_00711 1.1e-297 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
KDLFIFCD_00712 1.4e-83 K FR47-like protein
KDLFIFCD_00713 7.1e-237 L transposase, IS605 OrfB family
KDLFIFCD_00714 2.1e-28 S Peptidase propeptide and YPEB domain
KDLFIFCD_00715 2.4e-60 ypaA S Protein of unknown function (DUF1304)
KDLFIFCD_00716 2.3e-309 oppA3 E ABC transporter, substratebinding protein
KDLFIFCD_00717 9e-161 V ABC transporter transmembrane region
KDLFIFCD_00718 7e-68 V ABC transporter transmembrane region
KDLFIFCD_00719 3.8e-65 yybA 2.3.1.57 K Transcriptional regulator
KDLFIFCD_00720 4.7e-83 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
KDLFIFCD_00721 2.5e-72 S Peptidase propeptide and YPEB domain
KDLFIFCD_00722 3.4e-76 S Peptidase propeptide and YPEB domain
KDLFIFCD_00723 5.2e-187 T GHKL domain
KDLFIFCD_00724 3.1e-130 T Transcriptional regulatory protein, C terminal
KDLFIFCD_00725 2.1e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
KDLFIFCD_00726 2.9e-277 V ABC transporter transmembrane region
KDLFIFCD_00727 0.0 clpE O Belongs to the ClpA ClpB family
KDLFIFCD_00728 2.3e-44 XK27_09445 S Domain of unknown function (DUF1827)
KDLFIFCD_00729 9.4e-305 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
KDLFIFCD_00730 1.4e-140 hlyX S Transporter associated domain
KDLFIFCD_00731 2.7e-74
KDLFIFCD_00732 1.6e-85
KDLFIFCD_00733 1.5e-144 recX 2.4.1.337 GT4 S Regulatory protein RecX
KDLFIFCD_00734 4.6e-263 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
KDLFIFCD_00735 1.4e-118 D Alpha beta
KDLFIFCD_00736 1.8e-38 D Alpha beta
KDLFIFCD_00737 9.4e-46
KDLFIFCD_00738 1.1e-282 phoR 2.7.13.3 T Histidine kinase
KDLFIFCD_00739 9.5e-121 T Transcriptional regulatory protein, C terminal
KDLFIFCD_00740 4e-105 phoU P Plays a role in the regulation of phosphate uptake
KDLFIFCD_00741 1.3e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
KDLFIFCD_00742 1.2e-152 pstA P Phosphate transport system permease protein PstA
KDLFIFCD_00743 1.1e-159 pstC P probably responsible for the translocation of the substrate across the membrane
KDLFIFCD_00744 4.2e-145 pstS P Phosphate
KDLFIFCD_00745 1.3e-30
KDLFIFCD_00746 1.4e-191 oppA E ABC transporter, substratebinding protein
KDLFIFCD_00747 4.7e-275 ytgP S Polysaccharide biosynthesis protein
KDLFIFCD_00748 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
KDLFIFCD_00749 1.1e-121 3.6.1.27 I Acid phosphatase homologues
KDLFIFCD_00750 2.8e-168 K LysR substrate binding domain
KDLFIFCD_00751 2.3e-84 3.6.4.12 S PD-(D/E)XK nuclease family transposase
KDLFIFCD_00752 6.2e-43 1.3.5.4 C FAD binding domain
KDLFIFCD_00753 2.4e-231 ndh 1.6.99.3 C NADH dehydrogenase
KDLFIFCD_00754 1.1e-161 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
KDLFIFCD_00755 6.1e-177 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
KDLFIFCD_00756 2.2e-128 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
KDLFIFCD_00757 4.1e-269 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
KDLFIFCD_00758 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
KDLFIFCD_00759 8.2e-177 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
KDLFIFCD_00760 1.5e-272 cydA 1.10.3.14 C ubiquinol oxidase
KDLFIFCD_00761 3.7e-130 ybbH_2 K rpiR family
KDLFIFCD_00762 2.6e-126 S Bacterial protein of unknown function (DUF871)
KDLFIFCD_00763 2.2e-54 oppA E ABC transporter substrate-binding protein
KDLFIFCD_00764 1.3e-149 oppA E ABC transporter substrate-binding protein
KDLFIFCD_00765 1.7e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
KDLFIFCD_00766 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
KDLFIFCD_00767 6.5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
KDLFIFCD_00768 3.3e-189 cggR K Putative sugar-binding domain
KDLFIFCD_00770 2.8e-290
KDLFIFCD_00771 4.6e-274 ycaM E amino acid
KDLFIFCD_00772 3.1e-139 S Cysteine-rich secretory protein family
KDLFIFCD_00773 4.2e-77 K MerR HTH family regulatory protein
KDLFIFCD_00774 1.4e-262 lmrB EGP Major facilitator Superfamily
KDLFIFCD_00775 3.1e-48 S Domain of unknown function (DUF4811)
KDLFIFCD_00776 4e-08
KDLFIFCD_00777 6.6e-56
KDLFIFCD_00778 2.7e-57
KDLFIFCD_00779 1.6e-11
KDLFIFCD_00780 8.1e-126 S PAS domain
KDLFIFCD_00781 2.8e-216 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
KDLFIFCD_00782 4.8e-34 S reductase
KDLFIFCD_00783 4.4e-39 S reductase
KDLFIFCD_00784 2.7e-32 S reductase
KDLFIFCD_00785 1.3e-148 yxeH S hydrolase
KDLFIFCD_00786 6.8e-181 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
KDLFIFCD_00787 1.1e-243 yfnA E Amino Acid
KDLFIFCD_00788 6.8e-110 dedA 3.1.3.1 S SNARE associated Golgi protein
KDLFIFCD_00789 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
KDLFIFCD_00790 8.5e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
KDLFIFCD_00791 2.2e-292 I Acyltransferase
KDLFIFCD_00792 5.4e-175 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
KDLFIFCD_00793 5.1e-142 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
KDLFIFCD_00794 1.5e-34 yrvD S Lipopolysaccharide assembly protein A domain
KDLFIFCD_00795 1.3e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
KDLFIFCD_00796 2.6e-310 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
KDLFIFCD_00797 2.3e-23 S Protein of unknown function (DUF2929)
KDLFIFCD_00798 0.0 dnaE 2.7.7.7 L DNA polymerase
KDLFIFCD_00799 3.3e-183 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
KDLFIFCD_00800 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
KDLFIFCD_00801 1e-167 cvfB S S1 domain
KDLFIFCD_00802 2.9e-165 xerD D recombinase XerD
KDLFIFCD_00803 6.2e-54 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
KDLFIFCD_00804 7.6e-132 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
KDLFIFCD_00805 4.1e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
KDLFIFCD_00806 3.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
KDLFIFCD_00807 5.7e-113 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
KDLFIFCD_00808 2.7e-18 M Lysin motif
KDLFIFCD_00809 5e-114 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
KDLFIFCD_00810 5.5e-212 rpsA 1.17.7.4 J Ribosomal protein S1
KDLFIFCD_00811 1.9e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
KDLFIFCD_00812 2.3e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
KDLFIFCD_00813 8.7e-229 S Tetratricopeptide repeat protein
KDLFIFCD_00814 4e-237 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
KDLFIFCD_00815 8.9e-133 L Phage integrase family
KDLFIFCD_00816 5.1e-66 rpsI J Belongs to the universal ribosomal protein uS9 family
KDLFIFCD_00817 5.9e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
KDLFIFCD_00818 8.4e-145 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
KDLFIFCD_00819 7.2e-136 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
KDLFIFCD_00820 3.5e-157 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
KDLFIFCD_00821 1.4e-153 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
KDLFIFCD_00822 1.4e-60 rplQ J Ribosomal protein L17
KDLFIFCD_00823 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
KDLFIFCD_00824 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
KDLFIFCD_00825 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
KDLFIFCD_00826 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
KDLFIFCD_00827 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
KDLFIFCD_00828 1e-119 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
KDLFIFCD_00829 9e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
KDLFIFCD_00830 2.6e-71 rplO J Binds to the 23S rRNA
KDLFIFCD_00831 2.3e-24 rpmD J Ribosomal protein L30
KDLFIFCD_00832 4.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
KDLFIFCD_00833 3.6e-55 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
KDLFIFCD_00834 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
KDLFIFCD_00835 3.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
KDLFIFCD_00836 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
KDLFIFCD_00837 5.5e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
KDLFIFCD_00838 3.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
KDLFIFCD_00839 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
KDLFIFCD_00840 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
KDLFIFCD_00841 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
KDLFIFCD_00842 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
KDLFIFCD_00843 2.7e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
KDLFIFCD_00844 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
KDLFIFCD_00845 1.1e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
KDLFIFCD_00846 3.6e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
KDLFIFCD_00847 3.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
KDLFIFCD_00848 2.1e-106 rplD J Forms part of the polypeptide exit tunnel
KDLFIFCD_00849 9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
KDLFIFCD_00850 4.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
KDLFIFCD_00851 5.9e-45
KDLFIFCD_00852 3.7e-58 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
KDLFIFCD_00854 2.1e-45 S PFAM Archaeal ATPase
KDLFIFCD_00855 7.3e-74
KDLFIFCD_00856 0.0 kup P Transport of potassium into the cell
KDLFIFCD_00857 0.0 pepO 3.4.24.71 O Peptidase family M13
KDLFIFCD_00858 1.9e-19
KDLFIFCD_00859 2.5e-264 3.6.3.6 P Cation transporter/ATPase, N-terminus
KDLFIFCD_00860 4.4e-35 3.6.3.2, 3.6.3.6 P cation transport ATPase
KDLFIFCD_00861 7.8e-10 3.6.3.2, 3.6.3.6 P cation transport ATPase
KDLFIFCD_00862 1.3e-273 pipD E Dipeptidase
KDLFIFCD_00863 1.5e-102 devA 3.6.3.25 V ABC transporter, ATP-binding protein
KDLFIFCD_00864 3.3e-176 hrtB V ABC transporter permease
KDLFIFCD_00865 3.2e-92 ygfC K Bacterial regulatory proteins, tetR family
KDLFIFCD_00866 3.5e-111 G phosphoglycerate mutase
KDLFIFCD_00867 4.1e-141 aroD S Alpha/beta hydrolase family
KDLFIFCD_00868 2.2e-142 S Belongs to the UPF0246 family
KDLFIFCD_00869 3.3e-52 S Iron-sulfur cluster assembly protein
KDLFIFCD_00870 8.5e-154 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
KDLFIFCD_00871 3.4e-123 sdaAB 4.3.1.17 E Serine dehydratase beta chain
KDLFIFCD_00872 1.5e-43
KDLFIFCD_00873 2.7e-285 lsa S ABC transporter
KDLFIFCD_00874 1.6e-141 L An automated process has identified a potential problem with this gene model
KDLFIFCD_00875 7.9e-135 UW LPXTG-motif cell wall anchor domain protein
KDLFIFCD_00876 1.3e-161 UW LPXTG-motif cell wall anchor domain protein
KDLFIFCD_00877 3.3e-45 UW LPXTG-motif cell wall anchor domain protein
KDLFIFCD_00878 9.1e-10 UW LPXTG-motif cell wall anchor domain protein
KDLFIFCD_00879 1.3e-248 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
KDLFIFCD_00880 7.5e-100 J Acetyltransferase (GNAT) domain
KDLFIFCD_00881 1.4e-110 yjbF S SNARE associated Golgi protein
KDLFIFCD_00882 2.7e-151 I alpha/beta hydrolase fold
KDLFIFCD_00883 4.4e-62 hipB K Helix-turn-helix
KDLFIFCD_00884 8.3e-24 papP P ABC transporter, permease protein
KDLFIFCD_00886 4.5e-58 yodB K Transcriptional regulator, HxlR family
KDLFIFCD_00887 2.2e-134 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
KDLFIFCD_00888 2.9e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
KDLFIFCD_00889 2.4e-162 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
KDLFIFCD_00890 5.7e-83 S Aminoacyl-tRNA editing domain
KDLFIFCD_00891 6.1e-224 S SLAP domain
KDLFIFCD_00892 1.6e-93 S CAAX protease self-immunity
KDLFIFCD_00893 1e-12
KDLFIFCD_00894 1.3e-277 arlS 2.7.13.3 T Histidine kinase
KDLFIFCD_00895 1.2e-126 K response regulator
KDLFIFCD_00896 4.7e-97 yceD S Uncharacterized ACR, COG1399
KDLFIFCD_00897 4.6e-216 ylbM S Belongs to the UPF0348 family
KDLFIFCD_00898 5.3e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
KDLFIFCD_00899 6.6e-110 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
KDLFIFCD_00900 4.4e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
KDLFIFCD_00901 4.4e-200 yqeH S Ribosome biogenesis GTPase YqeH
KDLFIFCD_00902 4.2e-84 yqeG S HAD phosphatase, family IIIA
KDLFIFCD_00903 8.6e-199 tnpB L Putative transposase DNA-binding domain
KDLFIFCD_00904 3.1e-152 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
KDLFIFCD_00905 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
KDLFIFCD_00906 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
KDLFIFCD_00907 3.2e-72 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
KDLFIFCD_00908 4e-98 rihB 3.2.2.1 F Nucleoside
KDLFIFCD_00909 3.8e-103 potB E Binding-protein-dependent transport system inner membrane component
KDLFIFCD_00910 1e-15 S Domain of Unknown Function with PDB structure (DUF3850)
KDLFIFCD_00912 2.5e-89 M Protein of unknown function (DUF3737)
KDLFIFCD_00913 9.9e-227 patB 4.4.1.8 E Aminotransferase, class I
KDLFIFCD_00914 7.2e-191 manA 5.3.1.8 G mannose-6-phosphate isomerase
KDLFIFCD_00915 7.7e-67 S SdpI/YhfL protein family
KDLFIFCD_00916 4.4e-129 K Transcriptional regulatory protein, C terminal
KDLFIFCD_00917 7.2e-267 yclK 2.7.13.3, 4.6.1.1 T Histidine kinase
KDLFIFCD_00918 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
KDLFIFCD_00919 3.8e-105 vanZ V VanZ like family
KDLFIFCD_00920 3.2e-253 pgi 5.3.1.9 G Belongs to the GPI family
KDLFIFCD_00921 3.8e-217 EGP Major facilitator Superfamily
KDLFIFCD_00922 3.9e-195 ampC V Beta-lactamase
KDLFIFCD_00925 1.7e-262 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
KDLFIFCD_00926 1.3e-113 tdk 2.7.1.21 F thymidine kinase
KDLFIFCD_00927 3.1e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
KDLFIFCD_00928 7.3e-155 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
KDLFIFCD_00929 3.7e-190 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
KDLFIFCD_00930 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
KDLFIFCD_00931 3.8e-128 atpB C it plays a direct role in the translocation of protons across the membrane
KDLFIFCD_00932 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
KDLFIFCD_00933 3.4e-46 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
KDLFIFCD_00934 2.8e-91 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
KDLFIFCD_00935 2.8e-282 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
KDLFIFCD_00936 2e-172 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
KDLFIFCD_00937 3.3e-240 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
KDLFIFCD_00938 9e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
KDLFIFCD_00939 2e-30 ywzB S Protein of unknown function (DUF1146)
KDLFIFCD_00940 1.2e-177 mbl D Cell shape determining protein MreB Mrl
KDLFIFCD_00941 1e-50 yidD S Could be involved in insertion of integral membrane proteins into the membrane
KDLFIFCD_00942 3.3e-33 S Protein of unknown function (DUF2969)
KDLFIFCD_00943 4.7e-216 rodA D Belongs to the SEDS family
KDLFIFCD_00944 1.8e-78 usp6 T universal stress protein
KDLFIFCD_00945 8.4e-39
KDLFIFCD_00946 2.2e-238 rarA L recombination factor protein RarA
KDLFIFCD_00947 1.3e-84 yueI S Protein of unknown function (DUF1694)
KDLFIFCD_00948 1.4e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
KDLFIFCD_00949 2.1e-294 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
KDLFIFCD_00950 7.4e-214 iscS2 2.8.1.7 E Aminotransferase class V
KDLFIFCD_00951 2e-225 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
KDLFIFCD_00952 1.7e-184 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
KDLFIFCD_00953 3.2e-119 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
KDLFIFCD_00954 5.5e-44 3.6.4.12 S PD-(D/E)XK nuclease family transposase
KDLFIFCD_00955 2.1e-65 2.4.1.83 GT2 S GtrA-like protein
KDLFIFCD_00956 5.2e-170 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
KDLFIFCD_00957 1.5e-94 S Protein of unknown function (DUF3990)
KDLFIFCD_00958 6.5e-44
KDLFIFCD_00960 0.0 3.6.3.8 P P-type ATPase
KDLFIFCD_00961 1.1e-132 S AAA domain, putative AbiEii toxin, Type IV TA system
KDLFIFCD_00962 2.5e-52
KDLFIFCD_00963 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
KDLFIFCD_00964 1.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
KDLFIFCD_00965 5.7e-126 S Haloacid dehalogenase-like hydrolase
KDLFIFCD_00966 2.3e-108 radC L DNA repair protein
KDLFIFCD_00967 2.4e-176 mreB D cell shape determining protein MreB
KDLFIFCD_00968 2e-147 mreC M Involved in formation and maintenance of cell shape
KDLFIFCD_00969 2.7e-94 mreD
KDLFIFCD_00971 6.4e-54 S Protein of unknown function (DUF3397)
KDLFIFCD_00972 6.3e-78 mraZ K Belongs to the MraZ family
KDLFIFCD_00973 7.2e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
KDLFIFCD_00974 1.8e-54 ftsL D Cell division protein FtsL
KDLFIFCD_00975 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
KDLFIFCD_00976 1.5e-175 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
KDLFIFCD_00977 5e-262 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
KDLFIFCD_00978 3.7e-207 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
KDLFIFCD_00979 4.5e-152 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
KDLFIFCD_00980 1.3e-246 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
KDLFIFCD_00981 1.7e-206 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
KDLFIFCD_00982 7.3e-74 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
KDLFIFCD_00983 1.7e-45 yggT S YGGT family
KDLFIFCD_00984 5.7e-149 ylmH S S4 domain protein
KDLFIFCD_00985 2.8e-74 gpsB D DivIVA domain protein
KDLFIFCD_00986 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
KDLFIFCD_00987 3.6e-31 cspA K 'Cold-shock' DNA-binding domain
KDLFIFCD_00988 2.8e-102 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
KDLFIFCD_00989 6.7e-37
KDLFIFCD_00990 1.2e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
KDLFIFCD_00991 3.2e-217 iscS 2.8.1.7 E Aminotransferase class V
KDLFIFCD_00992 5.4e-56 XK27_04120 S Putative amino acid metabolism
KDLFIFCD_00993 1.9e-219 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
KDLFIFCD_00994 3.9e-127 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
KDLFIFCD_00995 8.3e-106 S Repeat protein
KDLFIFCD_00996 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
KDLFIFCD_00997 1.6e-294 L Nuclease-related domain
KDLFIFCD_00998 2.3e-164 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
KDLFIFCD_00999 1.4e-126 pgm3 G Phosphoglycerate mutase family
KDLFIFCD_01000 2.7e-124 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
KDLFIFCD_01001 0.0 helD 3.6.4.12 L DNA helicase
KDLFIFCD_01002 1.5e-107 glnP P ABC transporter permease
KDLFIFCD_01003 1e-105 glnQ 3.6.3.21 E ABC transporter
KDLFIFCD_01004 1.6e-143 aatB ET ABC transporter substrate-binding protein
KDLFIFCD_01005 7.5e-74 yjcF S Acetyltransferase (GNAT) domain
KDLFIFCD_01006 7.1e-98 E GDSL-like Lipase/Acylhydrolase
KDLFIFCD_01007 2.5e-169 coaA 2.7.1.33 F Pantothenic acid kinase
KDLFIFCD_01008 1.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
KDLFIFCD_01009 8.8e-58 S Peptidase propeptide and YPEB domain
KDLFIFCD_01010 1e-148 glcU U sugar transport
KDLFIFCD_01011 5.1e-44
KDLFIFCD_01012 6.2e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
KDLFIFCD_01013 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
KDLFIFCD_01014 1e-23 S Alpha beta hydrolase
KDLFIFCD_01015 1.3e-65 S Alpha beta hydrolase
KDLFIFCD_01016 1.9e-37
KDLFIFCD_01017 2.6e-52
KDLFIFCD_01018 4e-113 S haloacid dehalogenase-like hydrolase
KDLFIFCD_01019 2e-291 V ABC-type multidrug transport system, ATPase and permease components
KDLFIFCD_01020 3.8e-88 V ABC-type multidrug transport system, ATPase and permease components
KDLFIFCD_01021 5.3e-26
KDLFIFCD_01022 8.5e-41 ptsH G phosphocarrier protein HPR
KDLFIFCD_01023 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
KDLFIFCD_01024 3.9e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
KDLFIFCD_01025 8.5e-139 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
KDLFIFCD_01026 1.4e-158 coiA 3.6.4.12 S Competence protein
KDLFIFCD_01027 4.6e-114 yjbH Q Thioredoxin
KDLFIFCD_01028 6.8e-110 yjbK S CYTH
KDLFIFCD_01029 1.2e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
KDLFIFCD_01030 3.8e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
KDLFIFCD_01031 7.1e-172 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
KDLFIFCD_01032 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
KDLFIFCD_01033 4.2e-92 S SNARE associated Golgi protein

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)