ORF_ID e_value Gene_name EC_number CAZy COGs Description
HBMJOCDF_00001 1.2e-138 glvR K Helix-turn-helix domain, rpiR family
HBMJOCDF_00002 6e-80
HBMJOCDF_00003 2.9e-87 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
HBMJOCDF_00004 2.1e-39
HBMJOCDF_00005 3.9e-119 C nitroreductase
HBMJOCDF_00006 1.7e-249 yhdP S Transporter associated domain
HBMJOCDF_00007 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
HBMJOCDF_00008 0.0 1.3.5.4 C FAD binding domain
HBMJOCDF_00009 2.9e-88 L PFAM transposase, IS4 family protein
HBMJOCDF_00010 1.2e-49 L PFAM transposase, IS4 family protein
HBMJOCDF_00011 5.6e-186 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
HBMJOCDF_00012 1.7e-129 manY G PTS system
HBMJOCDF_00013 1e-173 manN G system, mannose fructose sorbose family IID component
HBMJOCDF_00014 9.9e-64 manO S Domain of unknown function (DUF956)
HBMJOCDF_00015 1.8e-159 K Transcriptional regulator
HBMJOCDF_00016 4.4e-83 maa S transferase hexapeptide repeat
HBMJOCDF_00017 8e-244 cycA E Amino acid permease
HBMJOCDF_00018 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
HBMJOCDF_00019 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
HBMJOCDF_00020 0.0 mtlR K Mga helix-turn-helix domain
HBMJOCDF_00021 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
HBMJOCDF_00022 2.1e-79 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
HBMJOCDF_00023 1.8e-220 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
HBMJOCDF_00024 8.1e-134 4.1.1.44 S Carboxymuconolactone decarboxylase family
HBMJOCDF_00025 1.6e-32
HBMJOCDF_00026 4.2e-71 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
HBMJOCDF_00027 2.3e-156 K Helix-turn-helix XRE-family like proteins
HBMJOCDF_00028 4.3e-10 KLT Protein kinase domain
HBMJOCDF_00029 8.7e-298 V ABC transporter transmembrane region
HBMJOCDF_00030 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
HBMJOCDF_00031 0.0 S TerB-C domain
HBMJOCDF_00032 1.2e-252 P P-loop Domain of unknown function (DUF2791)
HBMJOCDF_00033 0.0 lhr L DEAD DEAH box helicase
HBMJOCDF_00034 1.9e-59
HBMJOCDF_00035 2.2e-68 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
HBMJOCDF_00036 3.7e-60 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
HBMJOCDF_00037 3.8e-200 amtB P ammonium transporter
HBMJOCDF_00039 5.1e-61 psiE S Phosphate-starvation-inducible E
HBMJOCDF_00040 3.8e-113 yncA 2.3.1.79 S Maltose acetyltransferase
HBMJOCDF_00041 1.5e-70 S Iron-sulphur cluster biosynthesis
HBMJOCDF_00043 4.6e-31
HBMJOCDF_00044 1.1e-172 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
HBMJOCDF_00045 6.2e-12
HBMJOCDF_00046 2.2e-87 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
HBMJOCDF_00047 6.6e-29 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
HBMJOCDF_00049 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
HBMJOCDF_00050 3.1e-212 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
HBMJOCDF_00051 6.1e-185 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
HBMJOCDF_00052 2.1e-120 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
HBMJOCDF_00053 4.4e-144 K SIS domain
HBMJOCDF_00054 2.3e-228 slpX S SLAP domain
HBMJOCDF_00055 1.3e-22 3.6.4.12 S transposase or invertase
HBMJOCDF_00056 7.7e-12
HBMJOCDF_00057 1.1e-240 npr 1.11.1.1 C NADH oxidase
HBMJOCDF_00060 1.6e-299 oppA2 E ABC transporter, substratebinding protein
HBMJOCDF_00061 4.3e-179
HBMJOCDF_00062 2.9e-125 gntR1 K UTRA
HBMJOCDF_00063 5.1e-71 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
HBMJOCDF_00064 7.3e-135 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
HBMJOCDF_00065 3.4e-205 csaB M Glycosyl transferases group 1
HBMJOCDF_00066 2.4e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
HBMJOCDF_00067 3.3e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
HBMJOCDF_00068 0.0 pacL 3.6.3.8 P P-type ATPase
HBMJOCDF_00069 7e-225 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
HBMJOCDF_00070 4.9e-260 epsU S Polysaccharide biosynthesis protein
HBMJOCDF_00071 3.5e-134 M Glycosyltransferase sugar-binding region containing DXD motif
HBMJOCDF_00072 2.8e-84 ydcK S Belongs to the SprT family
HBMJOCDF_00074 2.5e-86 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
HBMJOCDF_00075 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
HBMJOCDF_00076 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
HBMJOCDF_00077 5.8e-203 camS S sex pheromone
HBMJOCDF_00078 1.5e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
HBMJOCDF_00079 5.2e-270 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
HBMJOCDF_00080 4.1e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
HBMJOCDF_00081 2.7e-171 yegS 2.7.1.107 G Lipid kinase
HBMJOCDF_00082 7.2e-18
HBMJOCDF_00083 2.9e-66 K transcriptional regulator
HBMJOCDF_00084 1.2e-105 ybhL S Belongs to the BI1 family
HBMJOCDF_00085 4.5e-50
HBMJOCDF_00086 1.3e-230 nhaC C Na H antiporter NhaC
HBMJOCDF_00087 1.6e-199 pbpX V Beta-lactamase
HBMJOCDF_00088 5.8e-255 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
HBMJOCDF_00089 1.1e-94 MA20_25245 K Acetyltransferase (GNAT) domain
HBMJOCDF_00094 9.5e-259 emrY EGP Major facilitator Superfamily
HBMJOCDF_00095 2.3e-90 yxdD K Bacterial regulatory proteins, tetR family
HBMJOCDF_00096 0.0 4.2.1.53 S Myosin-crossreactive antigen
HBMJOCDF_00097 9e-161 V ABC transporter transmembrane region
HBMJOCDF_00098 7e-68 V ABC transporter transmembrane region
HBMJOCDF_00099 3.8e-65 yybA 2.3.1.57 K Transcriptional regulator
HBMJOCDF_00100 4.7e-83 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
HBMJOCDF_00101 2.5e-72 S Peptidase propeptide and YPEB domain
HBMJOCDF_00102 5.8e-76 S Peptidase propeptide and YPEB domain
HBMJOCDF_00103 5.2e-187 T GHKL domain
HBMJOCDF_00104 3.1e-130 T Transcriptional regulatory protein, C terminal
HBMJOCDF_00105 2.1e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
HBMJOCDF_00106 2.9e-277 V ABC transporter transmembrane region
HBMJOCDF_00107 1.1e-56 S Protein of unknown function (DUF3290)
HBMJOCDF_00108 3e-116 yviA S Protein of unknown function (DUF421)
HBMJOCDF_00109 5.8e-157 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
HBMJOCDF_00110 1e-181 dnaQ 2.7.7.7 L EXOIII
HBMJOCDF_00111 1.9e-158 endA F DNA RNA non-specific endonuclease
HBMJOCDF_00112 1.6e-282 pipD E Dipeptidase
HBMJOCDF_00113 9.3e-203 malK P ATPases associated with a variety of cellular activities
HBMJOCDF_00114 1.6e-157 gtsB P ABC-type sugar transport systems, permease components
HBMJOCDF_00115 6.1e-146 gtsC P Binding-protein-dependent transport system inner membrane component
HBMJOCDF_00116 3.5e-257 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
HBMJOCDF_00117 1.1e-239 G Bacterial extracellular solute-binding protein
HBMJOCDF_00118 1.8e-154 corA P CorA-like Mg2+ transporter protein
HBMJOCDF_00119 7.4e-148 3.5.2.6 V Beta-lactamase enzyme family
HBMJOCDF_00120 2.3e-99 yobS K Bacterial regulatory proteins, tetR family
HBMJOCDF_00121 0.0 ydgH S MMPL family
HBMJOCDF_00122 1.4e-94
HBMJOCDF_00123 3e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
HBMJOCDF_00124 9e-98
HBMJOCDF_00125 4.9e-108 K LysR substrate binding domain
HBMJOCDF_00126 1e-20
HBMJOCDF_00127 2.3e-215 S Sterol carrier protein domain
HBMJOCDF_00128 9.2e-95 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
HBMJOCDF_00129 2e-105 argF 2.1.3.3, 2.7.2.2 E Belongs to the carbamate kinase family
HBMJOCDF_00130 4.3e-66 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
HBMJOCDF_00131 8.8e-234 arcA 3.5.3.6 E Arginine
HBMJOCDF_00132 1e-135 lysR5 K LysR substrate binding domain
HBMJOCDF_00133 0.0 mgtA 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
HBMJOCDF_00134 1e-48 S Metal binding domain of Ada
HBMJOCDF_00135 4.2e-92 S SNARE associated Golgi protein
HBMJOCDF_00136 5.3e-189 mycA 4.2.1.53 S Myosin-crossreactive antigen
HBMJOCDF_00137 1.2e-149 mycA 4.2.1.53 S Myosin-crossreactive antigen
HBMJOCDF_00138 9.2e-172 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
HBMJOCDF_00139 3.8e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
HBMJOCDF_00140 1.2e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
HBMJOCDF_00141 5.2e-110 yjbK S CYTH
HBMJOCDF_00142 4.6e-114 yjbH Q Thioredoxin
HBMJOCDF_00143 5.8e-160 coiA 3.6.4.12 S Competence protein
HBMJOCDF_00144 8.5e-139 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
HBMJOCDF_00145 3.9e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
HBMJOCDF_00146 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
HBMJOCDF_00147 8.5e-41 ptsH G phosphocarrier protein HPR
HBMJOCDF_00148 5.3e-26
HBMJOCDF_00149 0.0 clpE O Belongs to the ClpA ClpB family
HBMJOCDF_00150 8.7e-44 XK27_09445 S Domain of unknown function (DUF1827)
HBMJOCDF_00151 9.4e-305 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
HBMJOCDF_00152 7.6e-139 hlyX S Transporter associated domain
HBMJOCDF_00153 2.7e-74
HBMJOCDF_00154 1.6e-85
HBMJOCDF_00155 5.6e-144 recX 2.4.1.337 GT4 S Regulatory protein RecX
HBMJOCDF_00156 1.7e-262 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
HBMJOCDF_00157 1.4e-118 D Alpha beta
HBMJOCDF_00158 1.8e-38 D Alpha beta
HBMJOCDF_00159 6e-38 L Transposase and inactivated derivatives, IS30 family
HBMJOCDF_00160 2.8e-33 scrR K Periplasmic binding protein domain
HBMJOCDF_00161 2e-37 scrR K Periplasmic binding protein domain
HBMJOCDF_00162 0.0 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
HBMJOCDF_00163 1.3e-36
HBMJOCDF_00164 9.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
HBMJOCDF_00165 2.1e-141 ykuT M mechanosensitive ion channel
HBMJOCDF_00167 2.5e-14
HBMJOCDF_00168 1.9e-113 K sequence-specific DNA binding
HBMJOCDF_00170 5.6e-112 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
HBMJOCDF_00171 6.6e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
HBMJOCDF_00172 1.1e-71 yslB S Protein of unknown function (DUF2507)
HBMJOCDF_00173 9.7e-59 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
HBMJOCDF_00174 1e-53 trxA O Belongs to the thioredoxin family
HBMJOCDF_00175 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
HBMJOCDF_00176 1.1e-50 yrzB S Belongs to the UPF0473 family
HBMJOCDF_00177 6.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
HBMJOCDF_00178 2e-42 yrzL S Belongs to the UPF0297 family
HBMJOCDF_00179 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
HBMJOCDF_00180 4.7e-228 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
HBMJOCDF_00181 1.4e-181 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
HBMJOCDF_00182 6.2e-210 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
HBMJOCDF_00183 9.6e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
HBMJOCDF_00184 9.6e-41 yajC U Preprotein translocase
HBMJOCDF_00185 1.5e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
HBMJOCDF_00186 1.7e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
HBMJOCDF_00187 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
HBMJOCDF_00188 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
HBMJOCDF_00189 2.6e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
HBMJOCDF_00190 1.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
HBMJOCDF_00191 3.5e-75
HBMJOCDF_00192 2.3e-181 M CHAP domain
HBMJOCDF_00193 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
HBMJOCDF_00194 3.7e-295 scrB 3.2.1.26 GH32 G invertase
HBMJOCDF_00195 1.1e-183 scrR K helix_turn _helix lactose operon repressor
HBMJOCDF_00196 1.8e-223 S SLAP domain
HBMJOCDF_00197 5.7e-83 S Aminoacyl-tRNA editing domain
HBMJOCDF_00198 2.2e-163 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
HBMJOCDF_00199 2.9e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
HBMJOCDF_00200 7.7e-135 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
HBMJOCDF_00201 4.5e-58 yodB K Transcriptional regulator, HxlR family
HBMJOCDF_00203 1.2e-107 papP P ABC transporter, permease protein
HBMJOCDF_00204 5.9e-115 P ABC transporter permease
HBMJOCDF_00205 1.5e-127 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
HBMJOCDF_00206 1.6e-157 cjaA ET ABC transporter substrate-binding protein
HBMJOCDF_00207 7.1e-200 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
HBMJOCDF_00208 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
HBMJOCDF_00209 4.9e-63 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
HBMJOCDF_00210 1.4e-167 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
HBMJOCDF_00211 3.5e-136 metQ1 P Belongs to the nlpA lipoprotein family
HBMJOCDF_00212 1.9e-25
HBMJOCDF_00213 0.0 mco Q Multicopper oxidase
HBMJOCDF_00214 1.2e-151 S Sucrose-6F-phosphate phosphohydrolase
HBMJOCDF_00215 0.0 oppA E ABC transporter
HBMJOCDF_00216 4e-231 Q Imidazolonepropionase and related amidohydrolases
HBMJOCDF_00217 2.7e-246 3.5.1.47 S Peptidase dimerisation domain
HBMJOCDF_00218 1e-137 S Protein of unknown function (DUF3100)
HBMJOCDF_00219 5.7e-46 S An automated process has identified a potential problem with this gene model
HBMJOCDF_00220 2.6e-51 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
HBMJOCDF_00221 1.1e-112 S SLAP domain
HBMJOCDF_00222 8.4e-89
HBMJOCDF_00223 2.9e-09 isdH M Iron Transport-associated domain
HBMJOCDF_00224 3.1e-122 M Iron Transport-associated domain
HBMJOCDF_00225 4.3e-158 isdE P Periplasmic binding protein
HBMJOCDF_00226 3.8e-58 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
HBMJOCDF_00227 1.4e-79 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
HBMJOCDF_00228 6.7e-139 fhuC 3.6.3.34 HP abc transporter atp-binding protein
HBMJOCDF_00229 6.7e-44 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
HBMJOCDF_00230 3.4e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
HBMJOCDF_00231 1.3e-38 S RelB antitoxin
HBMJOCDF_00232 5.2e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
HBMJOCDF_00233 0.0 S membrane
HBMJOCDF_00234 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
HBMJOCDF_00235 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
HBMJOCDF_00236 2.7e-97 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
HBMJOCDF_00237 4e-119 gluP 3.4.21.105 S Rhomboid family
HBMJOCDF_00238 9.7e-36 yqgQ S Bacterial protein of unknown function (DUF910)
HBMJOCDF_00239 1.5e-65 yqhL P Rhodanese-like protein
HBMJOCDF_00240 1.1e-167 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
HBMJOCDF_00241 2.9e-224 ynbB 4.4.1.1 P aluminum resistance
HBMJOCDF_00242 2e-263 glnA 6.3.1.2 E glutamine synthetase
HBMJOCDF_00243 3e-170
HBMJOCDF_00244 1.2e-145
HBMJOCDF_00245 3e-217 lmrB EGP Major facilitator Superfamily
HBMJOCDF_00246 5e-30 S protein encoded in hypervariable junctions of pilus gene clusters
HBMJOCDF_00247 8.9e-27 ptcC1 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
HBMJOCDF_00248 1.4e-100 S Metal-independent alpha-mannosidase (GH125)
HBMJOCDF_00249 0.0 mngB 2.3.1.204, 3.2.1.170, 3.2.1.24 GH38 G Glycosyl hydrolases family 38 N-terminal domain
HBMJOCDF_00250 9.5e-274 mdlA V ABC transporter
HBMJOCDF_00251 5.4e-264 mdlB V ABC transporter
HBMJOCDF_00252 2.8e-241 3.2.1.52 GH20 G Glycosyl hydrolase family 20, catalytic domain
HBMJOCDF_00253 2.4e-154 U Binding-protein-dependent transport system inner membrane component
HBMJOCDF_00254 1.4e-43 lplC U Binding-protein-dependent transport system inner membrane component
HBMJOCDF_00255 2.3e-107 psaA P Belongs to the bacterial solute-binding protein 9 family
HBMJOCDF_00258 8.7e-218 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
HBMJOCDF_00259 2.4e-246 qacA EGP Major facilitator Superfamily
HBMJOCDF_00260 0.0 sacX 2.7.1.208, 2.7.1.211 G phosphotransferase system
HBMJOCDF_00261 3.1e-151 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
HBMJOCDF_00262 1.4e-183 yfeW 3.4.16.4 V Beta-lactamase
HBMJOCDF_00263 3.1e-187 S Bacterial protein of unknown function (DUF871)
HBMJOCDF_00264 4.5e-144 ybbH_2 K rpiR family
HBMJOCDF_00265 1.5e-272 cydA 1.10.3.14 C ubiquinol oxidase
HBMJOCDF_00266 2.5e-173 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
HBMJOCDF_00267 2.4e-311 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
HBMJOCDF_00268 4.1e-269 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
HBMJOCDF_00269 2.2e-128 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
HBMJOCDF_00270 6.1e-177 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
HBMJOCDF_00271 3.6e-160 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
HBMJOCDF_00272 1.2e-230 ndh 1.6.99.3 C NADH dehydrogenase
HBMJOCDF_00273 1.6e-43 1.3.5.4 C FAD binding domain
HBMJOCDF_00274 1.6e-85 3.6.4.12 S PD-(D/E)XK nuclease family transposase
HBMJOCDF_00275 2.6e-169 K LysR substrate binding domain
HBMJOCDF_00276 6.4e-122 3.6.1.27 I Acid phosphatase homologues
HBMJOCDF_00277 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
HBMJOCDF_00278 6.8e-298 ytgP S Polysaccharide biosynthesis protein
HBMJOCDF_00279 4.3e-47 pspC KT PspC domain
HBMJOCDF_00281 1.6e-233 dacA 3.4.16.4 M Belongs to the peptidase S11 family
HBMJOCDF_00282 6.9e-153 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
HBMJOCDF_00283 7.9e-99 M ErfK YbiS YcfS YnhG
HBMJOCDF_00284 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
HBMJOCDF_00285 6e-171 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
HBMJOCDF_00286 3e-90 S PFAM Archaeal ATPase
HBMJOCDF_00287 5.1e-91 S PFAM Archaeal ATPase
HBMJOCDF_00288 7.7e-26
HBMJOCDF_00289 4.3e-76 menA 2.5.1.74 H UbiA prenyltransferase family
HBMJOCDF_00290 4.2e-53 K LytTr DNA-binding domain
HBMJOCDF_00291 7.7e-39 S Protein of unknown function (DUF3021)
HBMJOCDF_00292 8.3e-168 V ABC transporter
HBMJOCDF_00293 8e-92 S domain protein
HBMJOCDF_00294 9.4e-51 L COG2826 Transposase and inactivated derivatives, IS30 family
HBMJOCDF_00295 1.3e-26 L COG2826 Transposase and inactivated derivatives, IS30 family
HBMJOCDF_00296 8.4e-251 ade 3.5.4.2 F Adenine deaminase C-terminal domain
HBMJOCDF_00297 1.1e-144 potD2 P ABC transporter
HBMJOCDF_00298 1.4e-136 potA11 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
HBMJOCDF_00299 2.2e-108 potC3 E Binding-protein-dependent transport system inner membrane component
HBMJOCDF_00300 3.8e-103 potB E Binding-protein-dependent transport system inner membrane component
HBMJOCDF_00301 4e-98 rihB 3.2.2.1 F Nucleoside
HBMJOCDF_00302 3.2e-72 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
HBMJOCDF_00303 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
HBMJOCDF_00304 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
HBMJOCDF_00305 2.3e-152 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
HBMJOCDF_00306 8.6e-199 tnpB L Putative transposase DNA-binding domain
HBMJOCDF_00307 4.2e-84 yqeG S HAD phosphatase, family IIIA
HBMJOCDF_00308 4.4e-200 yqeH S Ribosome biogenesis GTPase YqeH
HBMJOCDF_00309 4.4e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
HBMJOCDF_00310 4.3e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
HBMJOCDF_00311 5.3e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
HBMJOCDF_00312 4.6e-216 ylbM S Belongs to the UPF0348 family
HBMJOCDF_00313 4.7e-97 yceD S Uncharacterized ACR, COG1399
HBMJOCDF_00314 1.2e-126 K response regulator
HBMJOCDF_00315 1.3e-277 arlS 2.7.13.3 T Histidine kinase
HBMJOCDF_00316 9.5e-79 S CAAX protease self-immunity
HBMJOCDF_00317 3.4e-78 M LysM domain protein
HBMJOCDF_00318 2.5e-160 D nuclear chromosome segregation
HBMJOCDF_00319 1.2e-105 G Phosphoglycerate mutase family
HBMJOCDF_00320 1.7e-88 G Histidine phosphatase superfamily (branch 1)
HBMJOCDF_00321 6.6e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
HBMJOCDF_00322 3.3e-113 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
HBMJOCDF_00323 2.3e-164 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
HBMJOCDF_00324 1.6e-294 L Nuclease-related domain
HBMJOCDF_00325 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
HBMJOCDF_00326 8.3e-106 S Repeat protein
HBMJOCDF_00327 3.9e-127 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
HBMJOCDF_00328 5.1e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
HBMJOCDF_00329 5.4e-56 XK27_04120 S Putative amino acid metabolism
HBMJOCDF_00330 3.2e-217 iscS 2.8.1.7 E Aminotransferase class V
HBMJOCDF_00331 1.2e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
HBMJOCDF_00332 6.7e-37
HBMJOCDF_00333 2.8e-102 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
HBMJOCDF_00334 3.6e-31 cspA K 'Cold-shock' DNA-binding domain
HBMJOCDF_00335 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
HBMJOCDF_00336 2.8e-74 gpsB D DivIVA domain protein
HBMJOCDF_00337 3.7e-148 ylmH S S4 domain protein
HBMJOCDF_00338 1.7e-45 yggT S YGGT family
HBMJOCDF_00339 7.3e-74 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
HBMJOCDF_00340 1.7e-206 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
HBMJOCDF_00341 1.3e-246 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
HBMJOCDF_00342 4.5e-152 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
HBMJOCDF_00343 3.7e-207 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
HBMJOCDF_00344 5e-262 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
HBMJOCDF_00345 1.5e-175 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
HBMJOCDF_00346 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
HBMJOCDF_00347 7e-54 ftsL D Cell division protein FtsL
HBMJOCDF_00348 7.2e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
HBMJOCDF_00349 6.3e-78 mraZ K Belongs to the MraZ family
HBMJOCDF_00350 6.4e-54 S Protein of unknown function (DUF3397)
HBMJOCDF_00352 2.7e-94 mreD
HBMJOCDF_00353 2e-147 mreC M Involved in formation and maintenance of cell shape
HBMJOCDF_00354 2.4e-176 mreB D cell shape determining protein MreB
HBMJOCDF_00355 2.3e-108 radC L DNA repair protein
HBMJOCDF_00356 5.7e-126 S Haloacid dehalogenase-like hydrolase
HBMJOCDF_00357 1.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
HBMJOCDF_00358 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
HBMJOCDF_00359 2.5e-52
HBMJOCDF_00360 1.1e-132 S AAA domain, putative AbiEii toxin, Type IV TA system
HBMJOCDF_00361 0.0 3.6.3.8 P P-type ATPase
HBMJOCDF_00363 6.5e-44
HBMJOCDF_00364 1.5e-94 S Protein of unknown function (DUF3990)
HBMJOCDF_00365 5.2e-170 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
HBMJOCDF_00366 2.1e-65 2.4.1.83 GT2 S GtrA-like protein
HBMJOCDF_00367 5.5e-44 3.6.4.12 S PD-(D/E)XK nuclease family transposase
HBMJOCDF_00368 3.2e-119 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
HBMJOCDF_00369 1.7e-184 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
HBMJOCDF_00370 2e-225 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
HBMJOCDF_00371 7.3e-214 iscS2 2.8.1.7 E Aminotransferase class V
HBMJOCDF_00372 2.1e-294 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
HBMJOCDF_00373 1.4e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
HBMJOCDF_00374 1.3e-84 yueI S Protein of unknown function (DUF1694)
HBMJOCDF_00375 2.2e-238 rarA L recombination factor protein RarA
HBMJOCDF_00376 8.4e-39
HBMJOCDF_00377 1.8e-78 usp6 T universal stress protein
HBMJOCDF_00378 4.7e-216 rodA D Belongs to the SEDS family
HBMJOCDF_00379 3.3e-33 S Protein of unknown function (DUF2969)
HBMJOCDF_00380 1e-50 yidD S Could be involved in insertion of integral membrane proteins into the membrane
HBMJOCDF_00381 1.2e-177 mbl D Cell shape determining protein MreB Mrl
HBMJOCDF_00382 2e-30 ywzB S Protein of unknown function (DUF1146)
HBMJOCDF_00383 9e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
HBMJOCDF_00384 3.3e-240 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
HBMJOCDF_00385 2e-172 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
HBMJOCDF_00386 2.8e-282 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
HBMJOCDF_00387 2.8e-91 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
HBMJOCDF_00388 3.4e-46 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
HBMJOCDF_00389 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
HBMJOCDF_00390 3.8e-128 atpB C it plays a direct role in the translocation of protons across the membrane
HBMJOCDF_00391 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
HBMJOCDF_00392 3.7e-190 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
HBMJOCDF_00393 7.3e-155 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
HBMJOCDF_00394 3.1e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
HBMJOCDF_00395 1.3e-113 tdk 2.7.1.21 F thymidine kinase
HBMJOCDF_00396 1.7e-262 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
HBMJOCDF_00399 3.9e-195 ampC V Beta-lactamase
HBMJOCDF_00400 2.4e-216 EGP Major facilitator Superfamily
HBMJOCDF_00401 9.2e-253 pgi 5.3.1.9 G Belongs to the GPI family
HBMJOCDF_00402 3.8e-105 vanZ V VanZ like family
HBMJOCDF_00403 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
HBMJOCDF_00404 7.2e-267 yclK 2.7.13.3, 4.6.1.1 T Histidine kinase
HBMJOCDF_00405 7.5e-132 K Transcriptional regulatory protein, C terminal
HBMJOCDF_00406 7.7e-67 S SdpI/YhfL protein family
HBMJOCDF_00407 7.2e-191 manA 5.3.1.8 G mannose-6-phosphate isomerase
HBMJOCDF_00408 9.9e-227 patB 4.4.1.8 E Aminotransferase, class I
HBMJOCDF_00409 1.3e-88 M Protein of unknown function (DUF3737)
HBMJOCDF_00411 6.3e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
HBMJOCDF_00412 3.5e-188 ytxK 2.1.1.72 L N-6 DNA Methylase
HBMJOCDF_00413 1.6e-21
HBMJOCDF_00414 9.4e-76 comGF U Putative Competence protein ComGF
HBMJOCDF_00415 8.6e-41
HBMJOCDF_00416 7.4e-71
HBMJOCDF_00417 3.1e-43 comGC U competence protein ComGC
HBMJOCDF_00418 1.7e-171 comGB NU type II secretion system
HBMJOCDF_00419 1.7e-179 comGA NU Type II IV secretion system protein
HBMJOCDF_00420 8.9e-133 yebC K Transcriptional regulatory protein
HBMJOCDF_00421 2.9e-93 S VanZ like family
HBMJOCDF_00422 5.1e-108 ylbE GM NAD(P)H-binding
HBMJOCDF_00423 9.8e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
HBMJOCDF_00425 2.8e-304 E Amino acid permease
HBMJOCDF_00426 6.9e-178 D Alpha beta
HBMJOCDF_00427 9.1e-302 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
HBMJOCDF_00428 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
HBMJOCDF_00429 8.3e-143 licT K CAT RNA binding domain
HBMJOCDF_00430 3.8e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
HBMJOCDF_00431 7.4e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
HBMJOCDF_00432 1.6e-118
HBMJOCDF_00433 1.8e-75 K Penicillinase repressor
HBMJOCDF_00434 1.4e-147 S hydrolase
HBMJOCDF_00435 3.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
HBMJOCDF_00436 2e-172 ybbR S YbbR-like protein
HBMJOCDF_00437 6.4e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
HBMJOCDF_00438 7.3e-208 potD P ABC transporter
HBMJOCDF_00439 4.8e-127 potC P ABC transporter permease
HBMJOCDF_00440 1.3e-129 potB P ABC transporter permease
HBMJOCDF_00441 1.8e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
HBMJOCDF_00442 2e-163 murB 1.3.1.98 M Cell wall formation
HBMJOCDF_00443 4e-98 dnaQ 2.7.7.7 L DNA polymerase III
HBMJOCDF_00444 7e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
HBMJOCDF_00445 4.1e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
HBMJOCDF_00446 9.7e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
HBMJOCDF_00447 3.4e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
HBMJOCDF_00448 1.2e-94
HBMJOCDF_00449 6e-199 L COG2826 Transposase and inactivated derivatives, IS30 family
HBMJOCDF_00450 1.7e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
HBMJOCDF_00451 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
HBMJOCDF_00452 6.5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
HBMJOCDF_00453 3.3e-189 cggR K Putative sugar-binding domain
HBMJOCDF_00455 7.8e-288
HBMJOCDF_00456 4.6e-274 ycaM E amino acid
HBMJOCDF_00457 7.3e-141 S Cysteine-rich secretory protein family
HBMJOCDF_00458 9.9e-33 S Protein of unknown function (DUF3021)
HBMJOCDF_00459 1.3e-44 K LytTr DNA-binding domain
HBMJOCDF_00460 2.8e-93 cylB V ABC-2 type transporter
HBMJOCDF_00461 1.8e-116 cylA V ABC transporter
HBMJOCDF_00462 3.2e-77 K MerR HTH family regulatory protein
HBMJOCDF_00463 5.4e-262 lmrB EGP Major facilitator Superfamily
HBMJOCDF_00464 3.1e-93 S Domain of unknown function (DUF4811)
HBMJOCDF_00465 9.6e-130 ybbM S Uncharacterised protein family (UPF0014)
HBMJOCDF_00466 4.9e-111 ybbL S ABC transporter, ATP-binding protein
HBMJOCDF_00467 0.0 S SH3-like domain
HBMJOCDF_00468 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
HBMJOCDF_00469 2.1e-171 whiA K May be required for sporulation
HBMJOCDF_00470 1.5e-194 ybhK S Required for morphogenesis under gluconeogenic growth conditions
HBMJOCDF_00471 2.6e-163 rapZ S Displays ATPase and GTPase activities
HBMJOCDF_00472 1.4e-90 S Short repeat of unknown function (DUF308)
HBMJOCDF_00473 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
HBMJOCDF_00474 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
HBMJOCDF_00475 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
HBMJOCDF_00477 3.9e-181 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
HBMJOCDF_00478 6.3e-185 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
HBMJOCDF_00479 3.2e-158 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
HBMJOCDF_00480 5.8e-180 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
HBMJOCDF_00481 5.1e-17
HBMJOCDF_00482 1.3e-187 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
HBMJOCDF_00483 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
HBMJOCDF_00484 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
HBMJOCDF_00485 9.4e-132 comFC S Competence protein
HBMJOCDF_00486 4.7e-246 comFA L Helicase C-terminal domain protein
HBMJOCDF_00487 5.1e-119 yvyE 3.4.13.9 S YigZ family
HBMJOCDF_00488 1.3e-210 tagO 2.7.8.33, 2.7.8.35 M transferase
HBMJOCDF_00489 7.4e-220 rny S Endoribonuclease that initiates mRNA decay
HBMJOCDF_00490 4.2e-195 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
HBMJOCDF_00491 1.1e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
HBMJOCDF_00492 5.2e-97 ymfM S Helix-turn-helix domain
HBMJOCDF_00493 2.3e-133 IQ Enoyl-(Acyl carrier protein) reductase
HBMJOCDF_00494 1.8e-234 S Peptidase M16
HBMJOCDF_00495 2.6e-222 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
HBMJOCDF_00496 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
HBMJOCDF_00497 4.9e-69 WQ51_03320 S Protein of unknown function (DUF1149)
HBMJOCDF_00498 4.2e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
HBMJOCDF_00499 2.6e-214 yubA S AI-2E family transporter
HBMJOCDF_00500 1.9e-65 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
HBMJOCDF_00501 1.4e-200 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
HBMJOCDF_00502 0.0 L PLD-like domain
HBMJOCDF_00503 9.6e-103 pgm3 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
HBMJOCDF_00504 8.8e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
HBMJOCDF_00505 2.6e-280 thrC 4.2.3.1 E Threonine synthase
HBMJOCDF_00506 6.6e-221 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
HBMJOCDF_00507 2.8e-157 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
HBMJOCDF_00508 2.5e-118
HBMJOCDF_00509 4.6e-160 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
HBMJOCDF_00511 2.3e-08 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
HBMJOCDF_00512 2.5e-122 L Belongs to the 'phage' integrase family
HBMJOCDF_00513 1.6e-180 V Abi-like protein
HBMJOCDF_00516 2.5e-30 S Hypothetical protein (DUF2513)
HBMJOCDF_00517 6.2e-74 3.4.21.88 K Peptidase S24-like
HBMJOCDF_00518 2.3e-10 K Helix-turn-helix XRE-family like proteins
HBMJOCDF_00526 1.1e-20 L Psort location Cytoplasmic, score
HBMJOCDF_00529 1.3e-09
HBMJOCDF_00530 1.1e-24 S HNH endonuclease
HBMJOCDF_00535 1e-83 ps308 K AntA/AntB antirepressor
HBMJOCDF_00541 1.1e-08
HBMJOCDF_00542 4e-145 yfeO P Voltage gated chloride channel
HBMJOCDF_00543 4.2e-80 5.3.3.2 C FMN-dependent dehydrogenase
HBMJOCDF_00544 2.8e-85 5.3.3.2 C FMN-dependent dehydrogenase
HBMJOCDF_00545 2.8e-52
HBMJOCDF_00546 3.8e-42
HBMJOCDF_00547 2.4e-231 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
HBMJOCDF_00548 7.3e-297 ybeC E amino acid
HBMJOCDF_00549 2.6e-157 S Sucrose-6F-phosphate phosphohydrolase
HBMJOCDF_00550 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
HBMJOCDF_00551 2.5e-39 rpmE2 J Ribosomal protein L31
HBMJOCDF_00552 1.5e-261 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
HBMJOCDF_00553 1.9e-251 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
HBMJOCDF_00554 1.7e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
HBMJOCDF_00555 1e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
HBMJOCDF_00556 3.4e-129 S (CBS) domain
HBMJOCDF_00557 1.5e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
HBMJOCDF_00558 5.1e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
HBMJOCDF_00559 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
HBMJOCDF_00560 1.6e-33 yabO J S4 domain protein
HBMJOCDF_00561 6.8e-60 divIC D Septum formation initiator
HBMJOCDF_00562 1.8e-62 yabR J S1 RNA binding domain
HBMJOCDF_00563 1.5e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
HBMJOCDF_00564 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
HBMJOCDF_00565 9.7e-166 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
HBMJOCDF_00566 2e-194 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
HBMJOCDF_00567 1.7e-298 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
HBMJOCDF_00568 5.3e-15 O Belongs to the peptidase S8 family
HBMJOCDF_00569 0.0 O Belongs to the peptidase S8 family
HBMJOCDF_00570 3.4e-175 dhaK 2.7.1.121, 2.7.1.28, 2.7.1.29, 4.6.1.15 G Dak1 domain
HBMJOCDF_00571 4.2e-93 dhaL 2.7.1.121 S Dak2
HBMJOCDF_00572 2.5e-54 dhaM 2.7.1.121 S PTS system fructose IIA component
HBMJOCDF_00573 4.9e-120 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
HBMJOCDF_00574 1.9e-16 3.6.4.12 S PD-(D/E)XK nuclease family transposase
HBMJOCDF_00575 8.4e-71 3.6.4.12 S PD-(D/E)XK nuclease family transposase
HBMJOCDF_00576 4.1e-14 phoU P Plays a role in the regulation of phosphate uptake
HBMJOCDF_00577 3.9e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
HBMJOCDF_00578 5e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
HBMJOCDF_00579 1e-154 pstA P Phosphate transport system permease protein PstA
HBMJOCDF_00580 4.3e-162 pstC P probably responsible for the translocation of the substrate across the membrane
HBMJOCDF_00581 1.8e-156 pstS P Phosphate
HBMJOCDF_00582 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
HBMJOCDF_00583 1.2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
HBMJOCDF_00584 3.1e-101 nusG K Participates in transcription elongation, termination and antitermination
HBMJOCDF_00585 3.6e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
HBMJOCDF_00586 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
HBMJOCDF_00587 8.4e-287 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
HBMJOCDF_00588 2.3e-26
HBMJOCDF_00589 4.2e-95 sigH K Belongs to the sigma-70 factor family
HBMJOCDF_00590 6.6e-139 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
HBMJOCDF_00591 2.9e-73 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
HBMJOCDF_00592 3.4e-277 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
HBMJOCDF_00593 2.1e-290 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
HBMJOCDF_00594 2.7e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
HBMJOCDF_00595 1.8e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
HBMJOCDF_00596 8e-38
HBMJOCDF_00597 3.7e-111 K WHG domain
HBMJOCDF_00598 6.4e-96 nqr 1.5.1.36 S NADPH-dependent FMN reductase
HBMJOCDF_00599 2.9e-96 azr 1.5.1.36 S NADPH-dependent FMN reductase
HBMJOCDF_00600 1.5e-149 3.1.3.48 T Tyrosine phosphatase family
HBMJOCDF_00601 7.2e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
HBMJOCDF_00602 3e-53 cvpA S Colicin V production protein
HBMJOCDF_00603 1.6e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
HBMJOCDF_00604 1.9e-147 noc K Belongs to the ParB family
HBMJOCDF_00605 3.4e-138 soj D Sporulation initiation inhibitor
HBMJOCDF_00606 1.7e-154 spo0J K Belongs to the ParB family
HBMJOCDF_00607 9.6e-45 yyzM S Bacterial protein of unknown function (DUF951)
HBMJOCDF_00608 3.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
HBMJOCDF_00609 3.8e-137 XK27_01040 S Protein of unknown function (DUF1129)
HBMJOCDF_00610 1.3e-302 L Transposase
HBMJOCDF_00611 2.7e-216 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
HBMJOCDF_00612 4.6e-211 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
HBMJOCDF_00613 2.5e-214 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
HBMJOCDF_00614 2.1e-168 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
HBMJOCDF_00615 1.8e-162 yihY S Belongs to the UPF0761 family
HBMJOCDF_00616 6.5e-164 map 3.4.11.18 E Methionine Aminopeptidase
HBMJOCDF_00617 4.8e-86 gtcA S Teichoic acid glycosylation protein
HBMJOCDF_00618 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
HBMJOCDF_00619 1.8e-167 dnaI L Primosomal protein DnaI
HBMJOCDF_00620 1.2e-249 dnaB L Replication initiation and membrane attachment
HBMJOCDF_00621 3.9e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
HBMJOCDF_00622 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
HBMJOCDF_00623 9.4e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
HBMJOCDF_00624 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
HBMJOCDF_00625 3.8e-30
HBMJOCDF_00626 5.8e-164 msmX P Belongs to the ABC transporter superfamily
HBMJOCDF_00627 2.7e-164 lacR K Transcriptional regulator
HBMJOCDF_00628 0.0 lacS G Transporter
HBMJOCDF_00629 0.0 lacZ 3.2.1.23 G -beta-galactosidase
HBMJOCDF_00630 8.1e-126 S PAS domain
HBMJOCDF_00631 1.6e-11
HBMJOCDF_00632 2.7e-57
HBMJOCDF_00633 6.6e-56
HBMJOCDF_00634 4e-08
HBMJOCDF_00635 1.1e-68 S Domain of unknown function (DUF1934)
HBMJOCDF_00636 1.5e-46 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
HBMJOCDF_00637 3.4e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
HBMJOCDF_00638 1.4e-245 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
HBMJOCDF_00639 2.1e-80 K acetyltransferase
HBMJOCDF_00640 1.3e-47 adk 2.7.4.3 F AAA domain
HBMJOCDF_00641 4.4e-285 pipD E Dipeptidase
HBMJOCDF_00642 2.2e-148 msmR K AraC-like ligand binding domain
HBMJOCDF_00643 1.4e-226 pbuX F xanthine permease
HBMJOCDF_00644 3.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
HBMJOCDF_00645 2.1e-42 K Helix-turn-helix
HBMJOCDF_00646 3e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
HBMJOCDF_00648 4.9e-99 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
HBMJOCDF_00649 5.6e-226 3.2.1.18 GH33 M Rib/alpha-like repeat
HBMJOCDF_00650 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
HBMJOCDF_00651 1.7e-29 secG U Preprotein translocase
HBMJOCDF_00652 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
HBMJOCDF_00653 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
HBMJOCDF_00654 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
HBMJOCDF_00655 7e-146 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
HBMJOCDF_00656 4.5e-188 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
HBMJOCDF_00657 2.4e-161 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
HBMJOCDF_00658 4.4e-106 K Transcriptional regulator, AbiEi antitoxin
HBMJOCDF_00659 1.1e-189 K Periplasmic binding protein-like domain
HBMJOCDF_00660 0.0 S PglZ domain
HBMJOCDF_00661 4.7e-276 1.3.5.4 C FMN_bind
HBMJOCDF_00662 2.7e-226 P Sodium:sulfate symporter transmembrane region
HBMJOCDF_00663 8.3e-109 K LysR family
HBMJOCDF_00664 1.4e-272 1.3.5.4 C FMN_bind
HBMJOCDF_00665 2.6e-86 K LysR family
HBMJOCDF_00666 2.5e-164 S Protein of unknown function (DUF2974)
HBMJOCDF_00667 4.7e-109 glnP P ABC transporter permease
HBMJOCDF_00668 9.7e-91 gluC P ABC transporter permease
HBMJOCDF_00669 1.3e-148 glnH ET ABC transporter substrate-binding protein
HBMJOCDF_00670 1.9e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
HBMJOCDF_00671 1.8e-113 udk 2.7.1.48 F Zeta toxin
HBMJOCDF_00672 3e-254 G MFS/sugar transport protein
HBMJOCDF_00673 8.4e-102 S ABC-type cobalt transport system, permease component
HBMJOCDF_00674 0.0 V ABC transporter transmembrane region
HBMJOCDF_00675 3.6e-310 XK27_09600 V ABC transporter, ATP-binding protein
HBMJOCDF_00676 1.4e-80 K Transcriptional regulator, MarR family
HBMJOCDF_00677 1.5e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
HBMJOCDF_00678 5.3e-136 glvR K Helix-turn-helix domain, rpiR family
HBMJOCDF_00679 2.7e-268 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
HBMJOCDF_00680 6.7e-87 S hydrolase
HBMJOCDF_00681 2.5e-59 S Enterocin A Immunity
HBMJOCDF_00682 3.1e-136 glcR K DeoR C terminal sensor domain
HBMJOCDF_00683 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
HBMJOCDF_00684 7.6e-160 rssA S Phospholipase, patatin family
HBMJOCDF_00685 5.4e-147 S hydrolase
HBMJOCDF_00686 0.0 glvC 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
HBMJOCDF_00687 9.3e-136 UW LPXTG-motif cell wall anchor domain protein
HBMJOCDF_00688 9.3e-196 UW LPXTG-motif cell wall anchor domain protein
HBMJOCDF_00689 9.6e-45 UW LPXTG-motif cell wall anchor domain protein
HBMJOCDF_00690 2.3e-23 UW LPXTG-motif cell wall anchor domain protein
HBMJOCDF_00691 5.3e-237 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
HBMJOCDF_00692 2.4e-98 J Acetyltransferase (GNAT) domain
HBMJOCDF_00693 1.8e-110 yjbF S SNARE associated Golgi protein
HBMJOCDF_00694 1.2e-151 I alpha/beta hydrolase fold
HBMJOCDF_00695 1.5e-155 hipB K Helix-turn-helix
HBMJOCDF_00696 2.6e-83 F Nucleoside 2-deoxyribosyltransferase
HBMJOCDF_00697 1.9e-253 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
HBMJOCDF_00698 1.9e-149
HBMJOCDF_00699 7e-43 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
HBMJOCDF_00700 3.2e-170 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
HBMJOCDF_00701 8.1e-286 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
HBMJOCDF_00702 0.0 uup S ABC transporter, ATP-binding protein
HBMJOCDF_00703 5.8e-112 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
HBMJOCDF_00704 0.0 1.3.5.4 C FAD binding domain
HBMJOCDF_00705 2.8e-230 potE E amino acid
HBMJOCDF_00706 1.1e-130 M Glycosyl hydrolases family 25
HBMJOCDF_00707 8.1e-211 yfmL 3.6.4.13 L DEAD DEAH box helicase
HBMJOCDF_00708 1.8e-248 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
HBMJOCDF_00710 5.9e-216 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
HBMJOCDF_00711 8.9e-133 L Phage integrase family
HBMJOCDF_00712 5.1e-66 rpsI J Belongs to the universal ribosomal protein uS9 family
HBMJOCDF_00713 5.9e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
HBMJOCDF_00714 8.4e-145 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
HBMJOCDF_00715 7.2e-136 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
HBMJOCDF_00716 4.6e-157 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
HBMJOCDF_00717 3.7e-154 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
HBMJOCDF_00718 1.4e-60 rplQ J Ribosomal protein L17
HBMJOCDF_00719 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
HBMJOCDF_00720 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
HBMJOCDF_00721 3.6e-55 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
HBMJOCDF_00722 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
HBMJOCDF_00723 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
HBMJOCDF_00724 3.5e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
HBMJOCDF_00725 1.1e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
HBMJOCDF_00726 2.6e-71 rplO J Binds to the 23S rRNA
HBMJOCDF_00727 2.3e-24 rpmD J Ribosomal protein L30
HBMJOCDF_00728 4.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
HBMJOCDF_00729 1.1e-54 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
HBMJOCDF_00730 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
HBMJOCDF_00731 3.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
HBMJOCDF_00732 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
HBMJOCDF_00733 5.5e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
HBMJOCDF_00734 3.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
HBMJOCDF_00735 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
HBMJOCDF_00736 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
HBMJOCDF_00737 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
HBMJOCDF_00738 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
HBMJOCDF_00739 2.7e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
HBMJOCDF_00740 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
HBMJOCDF_00741 1.1e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
HBMJOCDF_00742 7.3e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
HBMJOCDF_00743 3.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
HBMJOCDF_00744 1.7e-105 rplD J Forms part of the polypeptide exit tunnel
HBMJOCDF_00745 9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
HBMJOCDF_00746 3.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
HBMJOCDF_00747 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
HBMJOCDF_00748 2.7e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
HBMJOCDF_00749 7.8e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
HBMJOCDF_00750 3.6e-120 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
HBMJOCDF_00751 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
HBMJOCDF_00752 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
HBMJOCDF_00753 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
HBMJOCDF_00754 1.3e-81 yebR 1.8.4.14 T GAF domain-containing protein
HBMJOCDF_00756 1.6e-08
HBMJOCDF_00757 1.2e-49 S Belongs to the short-chain dehydrogenases reductases (SDR) family
HBMJOCDF_00758 7e-135 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
HBMJOCDF_00759 1.3e-68 GM NAD(P)H-binding
HBMJOCDF_00760 8.9e-34 S Domain of unknown function (DUF4440)
HBMJOCDF_00761 6.6e-90 K LysR substrate binding domain
HBMJOCDF_00763 3.3e-45 K Tetracycline repressor, C-terminal all-alpha domain
HBMJOCDF_00764 3.2e-79 S X-Pro dipeptidyl-peptidase (S15 family)
HBMJOCDF_00765 7.7e-10 C Flavodoxin
HBMJOCDF_00766 6.4e-148 glnH ET ABC transporter
HBMJOCDF_00767 1.9e-129 yfeJ 6.3.5.2 F glutamine amidotransferase
HBMJOCDF_00768 1.5e-242 steT E amino acid
HBMJOCDF_00769 2.2e-238 steT E amino acid
HBMJOCDF_00770 6.1e-151
HBMJOCDF_00771 5.9e-174 S Aldo keto reductase
HBMJOCDF_00772 2.7e-310 ybiT S ABC transporter, ATP-binding protein
HBMJOCDF_00773 1.7e-209 pepA E M42 glutamyl aminopeptidase
HBMJOCDF_00774 1.6e-45
HBMJOCDF_00775 2.4e-136
HBMJOCDF_00776 1.1e-217 mdtG EGP Major facilitator Superfamily
HBMJOCDF_00777 9.2e-262 emrY EGP Major facilitator Superfamily
HBMJOCDF_00778 4.7e-91 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
HBMJOCDF_00779 2.9e-238 pyrP F Permease
HBMJOCDF_00780 2.9e-287 K Putative DNA-binding domain
HBMJOCDF_00781 2e-29
HBMJOCDF_00782 7.8e-157 S reductase
HBMJOCDF_00783 5.8e-85 2.3.1.128 K Acetyltransferase (GNAT) domain
HBMJOCDF_00784 2.8e-79 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
HBMJOCDF_00785 2.2e-226 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
HBMJOCDF_00786 8.7e-86 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
HBMJOCDF_00787 3.2e-139 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
HBMJOCDF_00789 8.3e-138 L An automated process has identified a potential problem with this gene model
HBMJOCDF_00790 2.8e-48 S Peptidase propeptide and YPEB domain
HBMJOCDF_00791 6.5e-169 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
HBMJOCDF_00792 7.2e-183 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
HBMJOCDF_00793 4.3e-52 K helix_turn_helix gluconate operon transcriptional repressor
HBMJOCDF_00794 2e-155 crtI 1.3.99.23, 5.2.1.13 Q HI0933-like protein
HBMJOCDF_00795 5e-125 C 2Fe-2S iron-sulfur cluster binding domain
HBMJOCDF_00796 2.8e-140 sufC O FeS assembly ATPase SufC
HBMJOCDF_00797 3.5e-174 sufD O FeS assembly protein SufD
HBMJOCDF_00798 5.3e-178 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
HBMJOCDF_00799 2.4e-59 nifU C SUF system FeS assembly protein, NifU family
HBMJOCDF_00800 2e-266 sufB O assembly protein SufB
HBMJOCDF_00801 2.4e-45 yitW S Iron-sulfur cluster assembly protein
HBMJOCDF_00802 2.9e-247 mntH P H( )-stimulated, divalent metal cation uptake system
HBMJOCDF_00803 5.2e-184 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
HBMJOCDF_00804 2.3e-116 dedA S SNARE-like domain protein
HBMJOCDF_00805 3.7e-100 S Protein of unknown function (DUF1461)
HBMJOCDF_00806 6.9e-144 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
HBMJOCDF_00807 8.3e-105 yutD S Protein of unknown function (DUF1027)
HBMJOCDF_00808 5.8e-274 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
HBMJOCDF_00809 4.3e-55
HBMJOCDF_00810 2.3e-267 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
HBMJOCDF_00811 3.2e-181 ccpA K catabolite control protein A
HBMJOCDF_00812 9.1e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
HBMJOCDF_00813 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
HBMJOCDF_00814 3.5e-32 ykzG S Belongs to the UPF0356 family
HBMJOCDF_00815 4e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
HBMJOCDF_00816 0.0 typA T GTP-binding protein TypA
HBMJOCDF_00817 1.3e-210 ftsW D Belongs to the SEDS family
HBMJOCDF_00818 5.1e-54 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
HBMJOCDF_00819 4.5e-97 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
HBMJOCDF_00820 3.6e-82 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
HBMJOCDF_00821 5.3e-187 ylbL T Belongs to the peptidase S16 family
HBMJOCDF_00822 3.1e-79 comEA L Competence protein ComEA
HBMJOCDF_00823 0.0 comEC S Competence protein ComEC
HBMJOCDF_00824 2.6e-175 holA 2.7.7.7 L DNA polymerase III delta subunit
HBMJOCDF_00825 2.6e-34 rpsT J Binds directly to 16S ribosomal RNA
HBMJOCDF_00826 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
HBMJOCDF_00827 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
HBMJOCDF_00828 3.4e-100 2.7.6.5 T Region found in RelA / SpoT proteins
HBMJOCDF_00829 3.2e-105 K response regulator
HBMJOCDF_00830 1.1e-103 sptS 2.7.13.3 T Histidine kinase
HBMJOCDF_00831 2.6e-103 sptS 2.7.13.3 T Histidine kinase
HBMJOCDF_00832 7.2e-209 EGP Major facilitator Superfamily
HBMJOCDF_00833 2.3e-69 O OsmC-like protein
HBMJOCDF_00834 2.2e-85 S Protein of unknown function (DUF805)
HBMJOCDF_00835 2.2e-78
HBMJOCDF_00836 5.1e-281
HBMJOCDF_00837 7.2e-15 S Fic/DOC family
HBMJOCDF_00838 6.3e-212 S Uncharacterized protein conserved in bacteria (DUF2325)
HBMJOCDF_00839 5e-235 G Bacterial extracellular solute-binding protein
HBMJOCDF_00840 7.7e-162 2.7.7.12 C Domain of unknown function (DUF4931)
HBMJOCDF_00841 3.5e-166 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
HBMJOCDF_00842 1e-125 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
HBMJOCDF_00843 0.0 kup P Transport of potassium into the cell
HBMJOCDF_00844 9.1e-175 rihB 3.2.2.1 F Nucleoside
HBMJOCDF_00845 2.8e-134 ydhQ K UbiC transcription regulator-associated domain protein
HBMJOCDF_00846 6.8e-40 S hydrolase
HBMJOCDF_00847 5.6e-179 S PFAM Archaeal ATPase
HBMJOCDF_00848 1.8e-193 I transferase activity, transferring acyl groups other than amino-acyl groups
HBMJOCDF_00849 7.4e-128 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
HBMJOCDF_00850 1.6e-140 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
HBMJOCDF_00851 2.9e-78 G Phosphoglycerate mutase family
HBMJOCDF_00852 8.9e-10 G Phosphoglycerate mutase family
HBMJOCDF_00853 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
HBMJOCDF_00854 6.5e-151 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
HBMJOCDF_00855 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
HBMJOCDF_00856 7.2e-56 yheA S Belongs to the UPF0342 family
HBMJOCDF_00857 5.9e-230 yhaO L Ser Thr phosphatase family protein
HBMJOCDF_00858 0.0 L AAA domain
HBMJOCDF_00859 1.9e-186 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
HBMJOCDF_00860 2.9e-23
HBMJOCDF_00861 2.4e-51 S Domain of unknown function DUF1829
HBMJOCDF_00862 3.1e-265
HBMJOCDF_00863 1.9e-72 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
HBMJOCDF_00864 1.5e-153 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
HBMJOCDF_00865 3.9e-25
HBMJOCDF_00866 8.3e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
HBMJOCDF_00867 1.7e-134 ecsA V ABC transporter, ATP-binding protein
HBMJOCDF_00868 2.9e-221 ecsB U ABC transporter
HBMJOCDF_00869 3.3e-126 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
HBMJOCDF_00871 2.8e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
HBMJOCDF_00872 1.7e-122 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
HBMJOCDF_00873 2.1e-185
HBMJOCDF_00874 1e-248 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
HBMJOCDF_00875 1.5e-234 mepA V MATE efflux family protein
HBMJOCDF_00876 1.3e-171 S SLAP domain
HBMJOCDF_00877 7.4e-74 L Putative transposase DNA-binding domain
HBMJOCDF_00878 1.7e-84 L Putative transposase DNA-binding domain
HBMJOCDF_00879 1.4e-83 L Resolvase, N-terminal
HBMJOCDF_00880 1.2e-157 M Peptidase family M1 domain
HBMJOCDF_00881 2.7e-193 S Bacteriocin helveticin-J
HBMJOCDF_00882 1.6e-18
HBMJOCDF_00883 2.4e-50 L RelB antitoxin
HBMJOCDF_00884 9.1e-140 qmcA O prohibitin homologues
HBMJOCDF_00885 2.6e-104 darA C Flavodoxin
HBMJOCDF_00886 5.5e-138 purD 6.3.4.13 F Belongs to the GARS family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)