ORF_ID e_value Gene_name EC_number CAZy COGs Description
PCDDNCKO_00001 2.3e-248 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PCDDNCKO_00002 1.6e-205 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PCDDNCKO_00003 2.4e-33 yaaA S S4 domain
PCDDNCKO_00004 1.9e-206 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PCDDNCKO_00005 8.1e-38 yaaB S Domain of unknown function (DUF370)
PCDDNCKO_00006 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PCDDNCKO_00007 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PCDDNCKO_00008 3.4e-39 S COG NOG14552 non supervised orthologous group
PCDDNCKO_00011 6.7e-184 yaaC S YaaC-like Protein
PCDDNCKO_00012 5.2e-273 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PCDDNCKO_00013 1.2e-249 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PCDDNCKO_00014 5.7e-158 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
PCDDNCKO_00015 9.5e-109 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
PCDDNCKO_00016 2.8e-206 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PCDDNCKO_00017 8.9e-204 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PCDDNCKO_00018 1.3e-09
PCDDNCKO_00019 4.8e-122 dck 2.7.1.113, 2.7.1.74, 2.7.1.76 F Deoxycytidine kinase
PCDDNCKO_00020 7.9e-114 dgk 2.7.1.113, 2.7.1.74, 2.7.1.76 F Deoxyguanosine kinase
PCDDNCKO_00021 2.2e-211 yaaH M Glycoside Hydrolase Family
PCDDNCKO_00022 3.7e-99 yaaI Q COG1335 Amidases related to nicotinamidase
PCDDNCKO_00023 3.5e-85 tadA 3.5.4.1, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PCDDNCKO_00024 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PCDDNCKO_00025 1e-35 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PCDDNCKO_00026 2.3e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PCDDNCKO_00027 3.6e-32 yaaL S Protein of unknown function (DUF2508)
PCDDNCKO_00028 1.9e-37 bofA S Sigma-K factor-processing regulatory protein BofA
PCDDNCKO_00029 3.4e-39 S COG NOG14552 non supervised orthologous group
PCDDNCKO_00032 2.2e-30 csfB S Inhibitor of sigma-G Gin
PCDDNCKO_00033 2.3e-105 xpaC S 5-bromo-4-chloroindolyl phosphate hydrolysis protein
PCDDNCKO_00034 3e-188 yaaN P Belongs to the TelA family
PCDDNCKO_00035 3.4e-269 adiA 4.1.1.17, 4.1.1.18, 4.1.1.19 E Orn Lys Arg decarboxylase
PCDDNCKO_00036 1.5e-112 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PCDDNCKO_00037 7.5e-55 yaaQ S protein conserved in bacteria
PCDDNCKO_00038 1.2e-71 yaaR S protein conserved in bacteria
PCDDNCKO_00039 1.3e-182 holB 2.7.7.7 L DNA polymerase III
PCDDNCKO_00040 8.8e-145 yaaT S stage 0 sporulation protein
PCDDNCKO_00041 7.7e-37 yabA L Involved in initiation control of chromosome replication
PCDDNCKO_00042 1.2e-137 yabB 2.1.1.223 S Conserved hypothetical protein 95
PCDDNCKO_00043 5.2e-47 yazA L endonuclease containing a URI domain
PCDDNCKO_00044 1.6e-160 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PCDDNCKO_00045 8.8e-44 abrB K COG2002 Regulators of stationary sporulation gene expression
PCDDNCKO_00046 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PCDDNCKO_00047 1.5e-143 tatD L hydrolase, TatD
PCDDNCKO_00048 1.8e-232 rpfB GH23 T protein conserved in bacteria
PCDDNCKO_00049 2.1e-97 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PCDDNCKO_00050 1.5e-158 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PCDDNCKO_00051 8.4e-146 yabG S peptidase
PCDDNCKO_00052 7.8e-39 veg S protein conserved in bacteria
PCDDNCKO_00053 2.9e-27 sspF S DNA topological change
PCDDNCKO_00054 2.1e-160 ispE 2.1.1.182, 2.7.1.148 I Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PCDDNCKO_00055 1.6e-152 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
PCDDNCKO_00056 5.1e-63 yabJ 3.5.99.10 J translation initiation inhibitor, yjgF family
PCDDNCKO_00057 1.8e-47 spoVG D Essential for sporulation. Interferes with or is a negative regulator of the pathway leading to asymmetric septation
PCDDNCKO_00058 9.2e-248 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PCDDNCKO_00059 9.4e-175 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PCDDNCKO_00060 1.7e-105 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PCDDNCKO_00061 1.2e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PCDDNCKO_00062 3.7e-40 yabK S Peptide ABC transporter permease
PCDDNCKO_00063 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PCDDNCKO_00064 6.2e-91 spoVT K stage V sporulation protein
PCDDNCKO_00065 5.4e-284 yabM S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PCDDNCKO_00066 2.8e-274 mazG 3.6.1.66, 3.6.1.9 S COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like
PCDDNCKO_00067 5.6e-37 yabO J COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
PCDDNCKO_00068 1.9e-49 yabP S Sporulation protein YabP
PCDDNCKO_00069 2.4e-102 yabQ S spore cortex biosynthesis protein
PCDDNCKO_00070 2.3e-52 divIC D Septum formation initiator
PCDDNCKO_00071 1.1e-57 yabR J RNA binding protein (contains ribosomal protein S1 domain)
PCDDNCKO_00074 0.0 spoIIE 3.1.3.16, 3.1.3.3 KT stage II sporulation protein E
PCDDNCKO_00075 1.6e-121 yabS S protein containing a von Willebrand factor type A (vWA) domain
PCDDNCKO_00076 2.3e-184 KLT serine threonine protein kinase
PCDDNCKO_00077 2.5e-272 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PCDDNCKO_00078 5.1e-93 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PCDDNCKO_00079 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PCDDNCKO_00080 1.1e-138 coaX 2.7.1.33 F Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PCDDNCKO_00081 7.1e-161 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PCDDNCKO_00082 6.6e-154 yacD 5.2.1.8 O peptidyl-prolyl isomerase
PCDDNCKO_00083 5.7e-169 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PCDDNCKO_00084 3.4e-269 pabB 2.6.1.85 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PCDDNCKO_00085 2.3e-107 pabA 2.6.1.85, 4.1.3.27 EH Anthranilate synthase
PCDDNCKO_00086 1.2e-160 pabC 2.6.1.42, 4.1.3.38 EH 4-amino-4-deoxychorismate lyase
PCDDNCKO_00087 6.7e-156 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PCDDNCKO_00088 7e-62 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PCDDNCKO_00089 9.9e-91 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
PCDDNCKO_00090 3.8e-28 yazB K transcriptional
PCDDNCKO_00091 1.9e-189 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PCDDNCKO_00092 8.4e-287 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PCDDNCKO_00093 3.4e-39 S COG NOG14552 non supervised orthologous group
PCDDNCKO_00095 1.3e-07
PCDDNCKO_00098 2e-08
PCDDNCKO_00103 3.4e-39 S COG NOG14552 non supervised orthologous group
PCDDNCKO_00104 7.5e-77 ctsR K Belongs to the CtsR family
PCDDNCKO_00105 4.1e-65 mcsA 2.7.14.1 S protein with conserved CXXC pairs
PCDDNCKO_00106 1.9e-203 mcsB 2.7.14.1, 2.7.3.2, 2.7.3.3 E Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity
PCDDNCKO_00107 0.0 clpC O Belongs to the ClpA ClpB family
PCDDNCKO_00108 7e-256 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PCDDNCKO_00109 1.9e-195 disA 2.7.7.85 L Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
PCDDNCKO_00110 9.4e-195 yacL S COG4956 Integral membrane protein (PIN domain superfamily)
PCDDNCKO_00111 5.5e-124 ispD 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PCDDNCKO_00112 3.5e-85 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 I Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PCDDNCKO_00113 2e-277 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PCDDNCKO_00114 1e-116 cysE 2.3.1.30 E Serine acetyltransferase
PCDDNCKO_00115 2.4e-267 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PCDDNCKO_00116 1e-72 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PCDDNCKO_00117 5.7e-135 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PCDDNCKO_00118 4.2e-89 yacP S RNA-binding protein containing a PIN domain
PCDDNCKO_00119 8.9e-116 sigH K Belongs to the sigma-70 factor family
PCDDNCKO_00120 7.8e-22 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PCDDNCKO_00121 3.2e-96 nusG K Participates in transcription elongation, termination and antitermination
PCDDNCKO_00122 2.8e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PCDDNCKO_00123 4.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PCDDNCKO_00124 2.5e-78 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PCDDNCKO_00125 1.3e-42 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PCDDNCKO_00126 6.3e-108 rsmC 2.1.1.172 J Methyltransferase
PCDDNCKO_00127 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PCDDNCKO_00128 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PCDDNCKO_00129 5.5e-34 ybxF J Belongs to the eukaryotic ribosomal protein eL8 family
PCDDNCKO_00130 6.5e-72 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PCDDNCKO_00131 7.9e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PCDDNCKO_00132 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PCDDNCKO_00133 6.1e-224 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PCDDNCKO_00134 3.7e-187 ybaC 3.4.11.5 S Alpha/beta hydrolase family
PCDDNCKO_00135 7.5e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PCDDNCKO_00136 2.2e-111 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PCDDNCKO_00137 2.3e-105 rplD J Forms part of the polypeptide exit tunnel
PCDDNCKO_00138 1.2e-43 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PCDDNCKO_00139 1.5e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PCDDNCKO_00140 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PCDDNCKO_00141 4.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PCDDNCKO_00142 8e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PCDDNCKO_00143 1.3e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PCDDNCKO_00144 1.7e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
PCDDNCKO_00145 2.7e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PCDDNCKO_00146 2.3e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PCDDNCKO_00147 6.2e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PCDDNCKO_00148 6e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PCDDNCKO_00149 3.4e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PCDDNCKO_00150 2.3e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PCDDNCKO_00151 7.9e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PCDDNCKO_00152 1.2e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PCDDNCKO_00153 2.4e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PCDDNCKO_00154 1.9e-23 rpmD J Ribosomal protein L30
PCDDNCKO_00155 1.1e-72 rplO J binds to the 23S rRNA
PCDDNCKO_00156 3.5e-233 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PCDDNCKO_00157 1.3e-122 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PCDDNCKO_00158 4.8e-142 map 3.4.11.18 E Methionine aminopeptidase
PCDDNCKO_00159 1.1e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PCDDNCKO_00160 4.2e-13 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PCDDNCKO_00161 4e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PCDDNCKO_00162 1.3e-64 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PCDDNCKO_00163 2.4e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PCDDNCKO_00164 4.7e-58 rplQ J Ribosomal protein L17
PCDDNCKO_00165 3.9e-156 cbiO P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PCDDNCKO_00166 9.6e-150 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PCDDNCKO_00167 3.5e-138 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PCDDNCKO_00168 1.4e-141 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PCDDNCKO_00169 6.4e-78 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PCDDNCKO_00170 1.6e-64 rpsI J Belongs to the universal ribosomal protein uS9 family
PCDDNCKO_00171 8.2e-145 ybaJ Q Methyltransferase domain
PCDDNCKO_00172 3e-81 yizA S Damage-inducible protein DinB
PCDDNCKO_00173 2.9e-78 ybaK S Protein of unknown function (DUF2521)
PCDDNCKO_00174 7.9e-134 cwlD 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
PCDDNCKO_00175 1.3e-196 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PCDDNCKO_00176 1.7e-75 gerD
PCDDNCKO_00177 1.3e-102 kbaA 2.7.8.43 S Involved in the activation of the KinB signaling pathway of sporulation
PCDDNCKO_00178 3.2e-133 pdaB 3.5.1.104 G Polysaccharide deacetylase
PCDDNCKO_00179 3.4e-39 S COG NOG14552 non supervised orthologous group
PCDDNCKO_00182 1.6e-08
PCDDNCKO_00185 3.4e-39 S COG NOG14552 non supervised orthologous group
PCDDNCKO_00186 1.5e-217 glcP G Major Facilitator Superfamily
PCDDNCKO_00187 1.9e-247 dat 2.6.1.19 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PCDDNCKO_00188 7.4e-180 suhB 3.1.3.25, 3.1.3.7 G inositol monophosphate 1-phosphatase activity
PCDDNCKO_00189 1.5e-202 1.1.1.14, 1.1.1.303, 1.1.1.4 E alcohol dehydrogenase
PCDDNCKO_00190 6e-226 ybaR P COG0659 Sulfate permease and related transporters (MFS superfamily)
PCDDNCKO_00191 2.2e-174 ybaS 1.1.1.58 S Na -dependent transporter
PCDDNCKO_00192 3.8e-110 ybbA S Putative esterase
PCDDNCKO_00193 2e-178 feuC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PCDDNCKO_00194 3.1e-176 feuB P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PCDDNCKO_00195 2e-172 feuA P Iron-uptake system-binding protein
PCDDNCKO_00196 4.5e-307 ybbB K COG2207 AraC-type DNA-binding domain-containing proteins
PCDDNCKO_00197 8.6e-237 ybbC 3.2.1.52 S protein conserved in bacteria
PCDDNCKO_00198 0.0 ybbD 3.2.1.52 G Belongs to the glycosyl hydrolase 3 family
PCDDNCKO_00199 3.1e-245 yfeW 3.4.16.4 V Belongs to the UPF0214 family
PCDDNCKO_00200 6.2e-236 ybbF 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PCDDNCKO_00201 1.1e-162 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PCDDNCKO_00202 9.1e-86 ybbJ J acetyltransferase
PCDDNCKO_00203 8.7e-78 ybbK 2.4.2.1, 6.3.2.4 S Protein of unknown function (DUF523)
PCDDNCKO_00209 1.4e-98 sigW K Belongs to the sigma-70 factor family. ECF subfamily
PCDDNCKO_00210 6.5e-116 rsiW K Is the anti-sigma factor for SigW. The presence of RsiW leads to the inactivation of SigW, and its proteolytic destruction to sigma-W activation
PCDDNCKO_00211 1e-145 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PCDDNCKO_00212 4.4e-224 ybbR S protein conserved in bacteria
PCDDNCKO_00213 3.5e-252 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PCDDNCKO_00214 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PCDDNCKO_00215 4.2e-153 V ATPases associated with a variety of cellular activities
PCDDNCKO_00216 3.8e-106 S ABC-2 family transporter protein
PCDDNCKO_00217 4e-98 ybdN
PCDDNCKO_00218 5.4e-132 ybdO S Domain of unknown function (DUF4885)
PCDDNCKO_00219 1.1e-161 dkgB S Aldo/keto reductase family
PCDDNCKO_00220 1e-93 yxaC M effector of murein hydrolase
PCDDNCKO_00221 1.2e-51 S LrgA family
PCDDNCKO_00222 3.4e-71 yxaD K helix_turn_helix multiple antibiotic resistance protein
PCDDNCKO_00224 4e-259 yifK E COG1113 Gamma-aminobutyrate permease and related permeases
PCDDNCKO_00225 8e-94 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PCDDNCKO_00226 2.2e-202 T COG4585 Signal transduction histidine kinase
PCDDNCKO_00227 6.7e-108 KT LuxR family transcriptional regulator
PCDDNCKO_00228 2.7e-166 V COG1131 ABC-type multidrug transport system, ATPase component
PCDDNCKO_00229 8.3e-205 V COG0842 ABC-type multidrug transport system, permease component
PCDDNCKO_00230 6.6e-199 V ABC-2 family transporter protein
PCDDNCKO_00231 2.2e-24
PCDDNCKO_00232 4.5e-77 S Domain of unknown function (DUF4879)
PCDDNCKO_00233 3.7e-38 csgA S Sigma-G-dependent sporulation-specific SASP protein
PCDDNCKO_00234 2e-105 yqeB
PCDDNCKO_00235 9.2e-40 ybyB
PCDDNCKO_00236 9.5e-292 ybeC E amino acid
PCDDNCKO_00238 1.8e-47
PCDDNCKO_00239 3.4e-15 S Protein of unknown function (DUF2651)
PCDDNCKO_00240 2.8e-165 glpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PCDDNCKO_00241 1.7e-259 glpT G -transporter
PCDDNCKO_00242 6e-17 S Protein of unknown function (DUF2651)
PCDDNCKO_00243 1.9e-211 hpaB 1.14.14.9 Q COG2368 Aromatic ring hydroxylase
PCDDNCKO_00245 0.0 ybfG 3.2.1.132 M Domain of unknown function (DUF1906)
PCDDNCKO_00246 3.5e-31
PCDDNCKO_00247 1.2e-82 K Helix-turn-helix XRE-family like proteins
PCDDNCKO_00248 1.4e-198 gldA 1.1.1.1, 1.1.1.6 C COG0371 Glycerol dehydrogenase and related enzymes
PCDDNCKO_00249 6.8e-212 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PCDDNCKO_00250 5e-93 pssA 2.7.8.8 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PCDDNCKO_00251 1.9e-86 ybfM S SNARE associated Golgi protein
PCDDNCKO_00252 2.5e-152 psd 4.1.1.65 I Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)
PCDDNCKO_00253 2.3e-41 ybfN
PCDDNCKO_00254 1.9e-191 yceA S Belongs to the UPF0176 family
PCDDNCKO_00255 1.9e-215 gltP C Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PCDDNCKO_00256 1.6e-199 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PCDDNCKO_00257 5.2e-257 mmuP E amino acid
PCDDNCKO_00258 1.6e-179 mmuM 1.5.1.20, 2.1.1.10 H homocysteine
PCDDNCKO_00259 3.9e-257 agcS E Sodium alanine symporter
PCDDNCKO_00260 1.5e-188 glsA 3.5.1.2 E Belongs to the glutaminase family
PCDDNCKO_00261 7.2e-210 phoQ 2.7.13.3 T Histidine kinase
PCDDNCKO_00262 3.7e-171 glnL T Regulator
PCDDNCKO_00263 4.6e-126 ycbJ S Macrolide 2'-phosphotransferase
PCDDNCKO_00264 1.8e-25 rtpA K Tryptophan RNA-binding attenuator protein inhibitory protein
PCDDNCKO_00265 5.6e-62 ycbP S Protein of unknown function (DUF2512)
PCDDNCKO_00266 1.4e-77 sleB 3.5.1.28 M Cell wall
PCDDNCKO_00267 0.0 phoD 3.1.3.1 P COG3540 Phosphodiesterase alkaline phosphatase D
PCDDNCKO_00268 4.4e-26 tatA U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
PCDDNCKO_00269 6.8e-125 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PCDDNCKO_00270 3.8e-119 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PCDDNCKO_00271 4e-209 ycbU E Selenocysteine lyase
PCDDNCKO_00272 4e-238 lmrB EGP the major facilitator superfamily
PCDDNCKO_00273 6.5e-99 yxaF K Transcriptional regulator
PCDDNCKO_00274 8.7e-196 ansB 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
PCDDNCKO_00275 5.7e-115 lip 3.1.1.3 S acetyltransferases and hydrolases with the alpha beta hydrolase fold
PCDDNCKO_00276 4.9e-196 yccF K DNA-templated transcriptional preinitiation complex assembly
PCDDNCKO_00277 1.8e-170 yccK C Aldo keto reductase
PCDDNCKO_00278 6.2e-177 ycdA S Domain of unknown function (DUF5105)
PCDDNCKO_00279 4.3e-261 ycdB K Belongs to the sigma-70 factor family. ECF subfamily
PCDDNCKO_00280 1.1e-266 ycdC K Belongs to the sigma-70 factor family. ECF subfamily
PCDDNCKO_00281 4.2e-89 cwlK M D-alanyl-D-alanine carboxypeptidase
PCDDNCKO_00282 1.9e-187 S response regulator aspartate phosphatase
PCDDNCKO_00283 1.2e-138 IQ Enoyl-(Acyl carrier protein) reductase
PCDDNCKO_00284 5.9e-36 EGP Major facilitator Superfamily
PCDDNCKO_00285 0.0 ycdG 3.2.1.10 GH13 G COG0366 Glycosidases
PCDDNCKO_00286 1e-163 adcA P Belongs to the bacterial solute-binding protein 9 family
PCDDNCKO_00287 2.5e-132 adcC P 'COG1121 ABC-type Mn Zn transport systems, ATPase component'
PCDDNCKO_00288 1.5e-136 adcB P COG1108 ABC-type Mn2 Zn2 transport systems, permease components
PCDDNCKO_00289 5.2e-184 yceB C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PCDDNCKO_00290 1.3e-108 yceC 3.5.4.33 T proteins involved in stress response, homologs of TerZ and
PCDDNCKO_00291 6.3e-105 yceD T proteins involved in stress response, homologs of TerZ and
PCDDNCKO_00292 1e-107 yceE T proteins involved in stress response, homologs of TerZ and
PCDDNCKO_00293 9.7e-138 terC P Protein of unknown function (DUF475)
PCDDNCKO_00294 0.0 yceG S Putative component of 'biosynthetic module'
PCDDNCKO_00295 2.3e-193 yceH P Belongs to the TelA family
PCDDNCKO_00296 9e-215 naiP P Uncharacterised MFS-type transporter YbfB
PCDDNCKO_00297 1.5e-228 proV 3.6.3.32 E glycine betaine
PCDDNCKO_00298 1.6e-138 opuAB P glycine betaine
PCDDNCKO_00299 2e-163 opuAC E glycine betaine
PCDDNCKO_00300 3.9e-212 amhX S amidohydrolase
PCDDNCKO_00301 4e-230 ycgA S Membrane
PCDDNCKO_00302 3.1e-81 ycgB
PCDDNCKO_00303 0.0 amyE 3.2.1.1 GH13 G alpha-amylase
PCDDNCKO_00304 3.7e-179 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PCDDNCKO_00305 4e-260 mdr EGP Major facilitator Superfamily
PCDDNCKO_00306 1.8e-75 emrR K helix_turn_helix multiple antibiotic resistance protein
PCDDNCKO_00307 4.7e-114 ycgF E Lysine exporter protein LysE YggA
PCDDNCKO_00308 4.4e-151 yqcI S YqcI/YcgG family
PCDDNCKO_00309 2.2e-246 ycgH E COG1113 Gamma-aminobutyrate permease and related permeases
PCDDNCKO_00310 7.6e-114 ycgI S Domain of unknown function (DUF1989)
PCDDNCKO_00311 1.8e-150 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PCDDNCKO_00313 5.2e-107 tmrB S AAA domain
PCDDNCKO_00314 1.6e-140 4.2.1.118 G Xylose isomerase-like TIM barrel
PCDDNCKO_00315 3.1e-221 G COG0477 Permeases of the major facilitator superfamily
PCDDNCKO_00316 8.7e-104 aroK 2.7.1.71, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PCDDNCKO_00317 2.9e-184 cah 3.1.1.41 Q Acetyl xylan esterase (AXE1)
PCDDNCKO_00318 1.5e-146 ycgL S Predicted nucleotidyltransferase
PCDDNCKO_00319 1.5e-169 ycgM E Proline dehydrogenase
PCDDNCKO_00320 3.4e-291 rocA 1.2.1.88, 1.5.5.2 C Belongs to the aldehyde dehydrogenase family. RocA subfamily
PCDDNCKO_00321 2.2e-244 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PCDDNCKO_00322 1.8e-226 ycgP QT COG2508 Regulator of polyketide synthase expression
PCDDNCKO_00323 6.4e-190 ycgT 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
PCDDNCKO_00324 1.1e-278 cobA 2.1.1.107, 4.2.1.75 H Belongs to the precorrin methyltransferase family
PCDDNCKO_00325 3.5e-57 nirD 1.7.1.15 P Nitrite reductase
PCDDNCKO_00326 0.0 nirB 1.7.1.15 C Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
PCDDNCKO_00327 0.0 nasC C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PCDDNCKO_00328 0.0 nirB 1.7.1.15 C Assimilatory nitrate reductase (electron transfer subunit)
PCDDNCKO_00329 4.5e-222 nasA P COG2223 Nitrate nitrite transporter
PCDDNCKO_00330 7.1e-228 yciC S GTPases (G3E family)
PCDDNCKO_00331 4.6e-221 adhB 1.1.1.1, 1.1.1.14, 1.1.1.284 E COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
PCDDNCKO_00332 1.1e-72 yckC S membrane
PCDDNCKO_00333 2.2e-51 S Protein of unknown function (DUF2680)
PCDDNCKO_00334 7.3e-296 yckE 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PCDDNCKO_00335 5e-69 nin S Competence protein J (ComJ)
PCDDNCKO_00336 2.4e-77 nucA M Deoxyribonuclease NucA/NucB
PCDDNCKO_00337 6.9e-93 hxlB 4.1.2.43, 5.3.1.27 G SIS domain
PCDDNCKO_00338 2.8e-106 hxlA 4.1.2.43 G 3-hexulose-6-phosphate synthase
PCDDNCKO_00339 6.3e-63 hxlR K transcriptional
PCDDNCKO_00340 0.0 srfAA Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PCDDNCKO_00341 0.0 srfAB Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PCDDNCKO_00342 0.0 srfAC Q COG1020 Non-ribosomal peptide synthetase modules and related proteins
PCDDNCKO_00343 6.4e-139 srfAD Q thioesterase
PCDDNCKO_00344 2.7e-249 bamJ E Aminotransferase class I and II
PCDDNCKO_00345 1.6e-131 acpT 2.7.8.7 H Belongs to the P-Pant transferase superfamily
PCDDNCKO_00346 7e-110 yczE S membrane
PCDDNCKO_00347 9.1e-133 tcyC 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
PCDDNCKO_00348 2e-118 tcyB P COG0765 ABC-type amino acid transport system, permease component
PCDDNCKO_00349 1.4e-142 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PCDDNCKO_00350 1.1e-158 bsdA K LysR substrate binding domain
PCDDNCKO_00351 9.3e-101 ubiX 2.5.1.129 H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
PCDDNCKO_00352 1.4e-283 yclC 4.1.1.61 H Decarboxylase involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions. It is able to catalyze the reversible decarboxylation of 4-hydroxybenzoate
PCDDNCKO_00353 2e-38 bsdD 4.1.1.61 S response to toxic substance
PCDDNCKO_00354 2e-77 yclD
PCDDNCKO_00355 3.2e-270 dtpT E amino acid peptide transporter
PCDDNCKO_00356 9.5e-282 yclG M Pectate lyase superfamily protein
PCDDNCKO_00358 1.7e-293 gerKA EG Spore germination protein
PCDDNCKO_00359 5.2e-234 gerKC S spore germination
PCDDNCKO_00360 1.1e-195 gerKB F Spore germination protein
PCDDNCKO_00361 1.3e-254 yxeK C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PCDDNCKO_00362 1.1e-91 yxeL K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PCDDNCKO_00363 7.9e-143 yxeM M Belongs to the bacterial solute-binding protein 3 family
PCDDNCKO_00364 7.7e-115 yxeN P COG0765 ABC-type amino acid transport system, permease component
PCDDNCKO_00365 2e-132 yxeO 3.6.3.21 P ABC transporter, ATP-binding protein
PCDDNCKO_00366 4.1e-217 yxeP 3.5.1.47 E hydrolase activity
PCDDNCKO_00367 1.6e-252 yxeQ S MmgE/PrpD family
PCDDNCKO_00368 1.7e-122 yclH P ABC transporter
PCDDNCKO_00369 4.9e-228 yclI V ABC transporter (permease) YclI
PCDDNCKO_00370 2.4e-127 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCDDNCKO_00371 4.1e-259 T PhoQ Sensor
PCDDNCKO_00372 1.6e-80 S aspartate phosphatase
PCDDNCKO_00374 3.2e-253 lysC 2.7.2.4 E Belongs to the aspartokinase family
PCDDNCKO_00375 6.8e-165 yclN P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PCDDNCKO_00376 1.1e-164 fatC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PCDDNCKO_00377 3.1e-136 yclP 3.6.3.34 P ABC transporter, ATP-binding protein
PCDDNCKO_00378 1.2e-174 yclQ P COG4607 ABC-type enterochelin transport system, periplasmic component
PCDDNCKO_00379 6.6e-249 ycnB EGP Major facilitator Superfamily
PCDDNCKO_00380 1.2e-152 ycnC K Transcriptional regulator
PCDDNCKO_00381 5.2e-136 nfrA2 1.5.1.38, 1.5.1.39 C Nitroreductase family
PCDDNCKO_00382 2.3e-44 ycnE S Monooxygenase
PCDDNCKO_00383 8.8e-53 yczG K helix_turn_helix, Arsenical Resistance Operon Repressor
PCDDNCKO_00384 5.5e-264 gabR K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PCDDNCKO_00385 2e-220 gabT 2.6.1.19, 2.6.1.22 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PCDDNCKO_00386 2.7e-263 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PCDDNCKO_00387 3.6e-149 glcU U Glucose uptake
PCDDNCKO_00388 1.9e-144 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PCDDNCKO_00389 7.8e-98 ycnI S protein conserved in bacteria
PCDDNCKO_00390 3e-298 ycnJ P protein, homolog of Cu resistance protein CopC
PCDDNCKO_00391 1.9e-106 ycnK K COG1349 Transcriptional regulators of sugar metabolism
PCDDNCKO_00392 1.6e-55
PCDDNCKO_00393 2.7e-226 mtlA 2.7.1.197 G COG2213 Phosphotransferase system, mannitol-specific IIBC component
PCDDNCKO_00394 1.4e-72 mtlF 2.7.1.197 G COG4668 Mannitol fructose-specific phosphotransferase system, IIA domain
PCDDNCKO_00395 3.4e-208 mtlD 1.1.1.17 G COG0246 Mannitol-1-phosphate altronate dehydrogenases
PCDDNCKO_00396 1e-66 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
PCDDNCKO_00398 1.4e-136 ycsE 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
PCDDNCKO_00399 6e-140 ycsF S Belongs to the UPF0271 (lamB) family
PCDDNCKO_00400 1.8e-210 ycsG P COG1914 Mn2 and Fe2 transporters of the NRAMP family
PCDDNCKO_00401 5.7e-149 ycsI S Belongs to the D-glutamate cyclase family
PCDDNCKO_00402 1.7e-136 kipI 3.5.1.54 E Allophanate hydrolase subunit 1
PCDDNCKO_00403 4.9e-190 kipA 6.3.4.6 E Allophanate hydrolase subunit 2
PCDDNCKO_00404 1.5e-130 kipR K Transcriptional regulator
PCDDNCKO_00405 2.3e-116 ycsK E anatomical structure formation involved in morphogenesis
PCDDNCKO_00407 1.9e-55 yczJ S biosynthesis
PCDDNCKO_00408 0.0 pbpC 3.4.16.4 M Penicillin-binding Protein
PCDDNCKO_00409 9.8e-174 ydhF S Oxidoreductase
PCDDNCKO_00410 0.0 mtlR K transcriptional regulator, MtlR
PCDDNCKO_00411 7.2e-286 ydaB IQ acyl-CoA ligase
PCDDNCKO_00412 4.5e-160 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PCDDNCKO_00413 3e-95 MA20_27600 5.3.1.15 S Cupin 2, conserved barrel domain protein
PCDDNCKO_00414 2.3e-113 rimL 1.1.1.25 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PCDDNCKO_00415 1.4e-77 ydaG 1.4.3.5 S general stress protein
PCDDNCKO_00416 4.6e-138 amj U Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane
PCDDNCKO_00417 3.9e-47 ydzA EGP Major facilitator Superfamily
PCDDNCKO_00418 1.2e-73 lrpC K Transcriptional regulator
PCDDNCKO_00419 0.0 topB 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PCDDNCKO_00420 2.9e-196 ydaJ M Belongs to the glycosyl hydrolase 8 (cellulase D) family
PCDDNCKO_00421 1.1e-147 ydaK T Diguanylate cyclase, GGDEF domain
PCDDNCKO_00422 0.0 ydaL S Uncharacterized protein conserved in bacteria (DUF2334)
PCDDNCKO_00423 2.7e-230 ydaM M Glycosyl transferase family group 2
PCDDNCKO_00424 0.0 ydaN S Bacterial cellulose synthase subunit
PCDDNCKO_00425 0.0 ydaO E amino acid
PCDDNCKO_00426 6.3e-73 mutT 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
PCDDNCKO_00427 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PCDDNCKO_00428 9e-64 K acetyltransferase
PCDDNCKO_00429 5.8e-09
PCDDNCKO_00431 2e-76
PCDDNCKO_00432 8.4e-100
PCDDNCKO_00433 2.1e-39
PCDDNCKO_00434 2e-225 mntH P H( )-stimulated, divalent metal cation uptake system
PCDDNCKO_00436 6.5e-34 ydaT
PCDDNCKO_00437 1.6e-70 yvaD S Family of unknown function (DUF5360)
PCDDNCKO_00438 7e-54 yvaE P Small Multidrug Resistance protein
PCDDNCKO_00439 4e-142 ydbA 3.6.3.4, 3.6.3.54 P EcsC protein family
PCDDNCKO_00441 9.8e-58 ydbB G Cupin domain
PCDDNCKO_00442 4.5e-61 ydbC S Domain of unknown function (DUF4937
PCDDNCKO_00443 4.2e-155 ydbD P Catalase
PCDDNCKO_00444 4.9e-201 dctB G COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component
PCDDNCKO_00445 9.4e-300 dctS 2.7.13.3 T Signal transduction histidine kinase regulating citrate malate metabolism
PCDDNCKO_00446 1.1e-118 dctR T COG4565 Response regulator of citrate malate metabolism
PCDDNCKO_00447 1.7e-224 dctA U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PCDDNCKO_00448 3.2e-160 ydbI S AI-2E family transporter
PCDDNCKO_00449 1.9e-172 ydbJ V ABC transporter, ATP-binding protein
PCDDNCKO_00450 7.4e-130 ydbK S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PCDDNCKO_00451 2.1e-52 ydbL
PCDDNCKO_00452 3.4e-203 ydbM 1.3.8.1 I acyl-CoA dehydrogenase
PCDDNCKO_00453 3.3e-10 S Fur-regulated basic protein B
PCDDNCKO_00454 5.8e-09 S Fur-regulated basic protein A
PCDDNCKO_00455 8.1e-120 yeaB P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PCDDNCKO_00456 8.5e-56 ydbP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PCDDNCKO_00457 9.3e-203 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PCDDNCKO_00458 4.8e-257 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PCDDNCKO_00459 2.9e-247 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PCDDNCKO_00460 3e-60 ydbS S Bacterial PH domain
PCDDNCKO_00461 9.7e-264 ydbT S Membrane
PCDDNCKO_00462 1.4e-107 ydcA 3.4.21.105 S membrane protein (homolog of Drosophila rhomboid)
PCDDNCKO_00463 6.8e-57 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PCDDNCKO_00464 2.6e-183 ydcC M COG2834 Outer membrane lipoprotein-sorting protein
PCDDNCKO_00465 6.9e-220 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PCDDNCKO_00466 8.1e-42 ndoAI K transcriptional regulators containing the CopG Arc MetJ DNA-binding domain and a metal-binding domain
PCDDNCKO_00467 2.5e-56 ndoA L Toxic component of a toxin-antitoxin (TA) module
PCDDNCKO_00468 6.1e-146 rsbR T Positive regulator of sigma-B
PCDDNCKO_00469 6.8e-57 rsbS T antagonist
PCDDNCKO_00470 3.8e-69 rsbT 2.7.11.1 T COG2172 Anti-sigma regulatory factor (Ser Thr protein kinase)
PCDDNCKO_00471 1.7e-187 rsbU 3.1.3.3 KT phosphatase
PCDDNCKO_00472 1.4e-53 rsbV T Belongs to the anti-sigma-factor antagonist family
PCDDNCKO_00473 2.1e-85 rsbW 2.7.11.1 F Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B)
PCDDNCKO_00474 1.4e-139 sigB K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PCDDNCKO_00475 9.7e-109 rsbX 3.1.3.16, 3.1.3.3 KT Sigma factor PP2C-like phosphatases
PCDDNCKO_00476 0.0 yhgF K COG2183 Transcriptional accessory protein
PCDDNCKO_00477 1.7e-14
PCDDNCKO_00478 1.9e-58 ydcK S Belongs to the SprT family
PCDDNCKO_00486 1.1e-95 ywrO S Flavodoxin-like fold
PCDDNCKO_00487 5.4e-227 proP EGP Transporter
PCDDNCKO_00488 9.5e-83 S Domain of unknown function with cystatin-like fold (DUF4467)
PCDDNCKO_00489 2.7e-73 maoC I N-terminal half of MaoC dehydratase
PCDDNCKO_00490 1e-62 yyaQ S YjbR
PCDDNCKO_00491 7.4e-74 ywnA K Transcriptional regulator
PCDDNCKO_00492 6.4e-111 ywnB S NAD(P)H-binding
PCDDNCKO_00493 6e-131 EGP Major Facilitator Superfamily
PCDDNCKO_00494 6.9e-56 K Transcriptional regulator
PCDDNCKO_00495 6.3e-193 des 1.14.19.23, 1.14.19.45 I fatty acid desaturase
PCDDNCKO_00496 1.4e-30 cspL K Cold shock
PCDDNCKO_00497 2e-77 carD K Transcription factor
PCDDNCKO_00498 4.6e-39 yrkD S protein conserved in bacteria
PCDDNCKO_00499 1.6e-82 yrkE O DsrE/DsrF/DrsH-like family
PCDDNCKO_00500 1.4e-57 P Rhodanese Homology Domain
PCDDNCKO_00501 6.8e-96 yrkF OP Belongs to the sulfur carrier protein TusA family
PCDDNCKO_00502 3.2e-198 yrkH P Rhodanese Homology Domain
PCDDNCKO_00503 1.2e-35 yrkI O Belongs to the sulfur carrier protein TusA family
PCDDNCKO_00504 8.6e-118 yrkJ S membrane transporter protein
PCDDNCKO_00505 1.9e-121 racX 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PCDDNCKO_00506 3.8e-99 S Protein of unknown function (DUF2812)
PCDDNCKO_00507 4.9e-51 K Transcriptional regulator PadR-like family
PCDDNCKO_00508 6.2e-182 S Patatin-like phospholipase
PCDDNCKO_00509 6.3e-79 S DinB superfamily
PCDDNCKO_00510 5e-117 ygeX 4.3.1.15, 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
PCDDNCKO_00511 4.6e-67 K COG1802 Transcriptional regulators
PCDDNCKO_00512 5.1e-39 yabJ 3.5.99.10 J Endoribonuclease L-PSP
PCDDNCKO_00513 5.5e-141 sdaC E Serine transporter
PCDDNCKO_00514 1.2e-163 E Peptidase dimerisation domain
PCDDNCKO_00515 1.7e-125 rhaS5 K helix_turn_helix, arabinose operon control protein
PCDDNCKO_00516 4.5e-177 amaB 3.5.1.6, 3.5.1.87 E COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases
PCDDNCKO_00517 1e-233 K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PCDDNCKO_00518 6.1e-193 ydeG EGP Major facilitator superfamily
PCDDNCKO_00519 7e-23 3.6.1.55 F Belongs to the Nudix hydrolase family
PCDDNCKO_00520 6.4e-168 czcD P COG1230 Co Zn Cd efflux system component
PCDDNCKO_00521 2.3e-195 trkA P Oxidoreductase
PCDDNCKO_00524 3.6e-14 ykkA S Protein of unknown function (DUF664)
PCDDNCKO_00525 2.5e-54 ydeH
PCDDNCKO_00526 6.4e-84 F nucleoside 2-deoxyribosyltransferase
PCDDNCKO_00527 9.6e-194 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PCDDNCKO_00528 4.6e-148 Q ubiE/COQ5 methyltransferase family
PCDDNCKO_00529 3.3e-147 thiD 2.5.1.3, 2.7.1.35, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PCDDNCKO_00530 4.1e-231 3.1.3.41 G Haloacid dehalogenase-like hydrolase
PCDDNCKO_00531 2e-164 S Sodium Bile acid symporter family
PCDDNCKO_00532 2.2e-201 adhA 1.1.1.1 C alcohol dehydrogenase
PCDDNCKO_00533 3.6e-67 yraB K helix_turn_helix, mercury resistance
PCDDNCKO_00534 2.8e-214 mleN_2 C antiporter
PCDDNCKO_00535 3.9e-262 K helix_turn_helix gluconate operon transcriptional repressor
PCDDNCKO_00536 4.2e-115 paiB K Transcriptional regulator
PCDDNCKO_00538 1.7e-181 ydeR EGP Major facilitator Superfamily
PCDDNCKO_00539 1.3e-102 ydeS K Transcriptional regulator
PCDDNCKO_00540 9.1e-156 ydeK EG -transporter
PCDDNCKO_00541 6.8e-267 ydeL K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PCDDNCKO_00542 9.5e-49 yraD M Spore coat protein
PCDDNCKO_00543 1.1e-24 yraE
PCDDNCKO_00544 1.6e-221 adhB 1.1.1.1, 1.1.1.14, 1.1.1.284 E COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
PCDDNCKO_00545 2.9e-63 yraF M Spore coat protein
PCDDNCKO_00546 4.5e-36 yraG
PCDDNCKO_00547 2.5e-108 ybjJ G Major Facilitator Superfamily
PCDDNCKO_00548 1.7e-76 2.7.1.2 GK Transcriptional regulator
PCDDNCKO_00549 4.1e-24 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PCDDNCKO_00550 5.1e-216 ydfH 2.7.13.3 T Histidine kinase
PCDDNCKO_00551 2.4e-110 ydfI K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PCDDNCKO_00552 0.0 ydfJ S drug exporters of the RND superfamily
PCDDNCKO_00553 3e-133 puuD S Peptidase C26
PCDDNCKO_00554 1.8e-298 expZ S ABC transporter
PCDDNCKO_00555 2.7e-99 ynaD J Acetyltransferase (GNAT) domain
PCDDNCKO_00556 3.2e-150 S Uncharacterized protein conserved in bacteria (DUF2179)
PCDDNCKO_00557 1.1e-195 gldA 1.1.1.6 C COG0371 Glycerol dehydrogenase and related enzymes
PCDDNCKO_00558 1.1e-209 tcaB EGP Major facilitator Superfamily
PCDDNCKO_00559 6.8e-226 fabF_1 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PCDDNCKO_00560 1.3e-156 K Helix-turn-helix XRE-family like proteins
PCDDNCKO_00561 8.5e-123 ydhB S membrane transporter protein
PCDDNCKO_00562 2.9e-81 bltD 2.3.1.57 K FR47-like protein
PCDDNCKO_00563 2.6e-149 bltR K helix_turn_helix, mercury resistance
PCDDNCKO_00564 6.9e-148 ydzE EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PCDDNCKO_00565 1.3e-113 yjhB 3.6.1.13, 3.6.1.55 F ADP-ribose pyrophosphatase
PCDDNCKO_00566 1.7e-145 ycgJ_1 Q ubiE/COQ5 methyltransferase family
PCDDNCKO_00567 4.7e-167 ycsA 1.1.1.83, 1.1.1.93, 4.1.1.73 CE Isocitrate/isopropylmalate dehydrogenase
PCDDNCKO_00568 4e-119 ydhC K FCD
PCDDNCKO_00569 1.7e-226 ydhE CG COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
PCDDNCKO_00572 6.5e-262 pbpE V Beta-lactamase
PCDDNCKO_00574 2.7e-97 ydhK M Protein of unknown function (DUF1541)
PCDDNCKO_00575 1.2e-195 pbuE EGP Major facilitator Superfamily
PCDDNCKO_00576 5.1e-133 ydhQ K UTRA
PCDDNCKO_00577 1.4e-116 K FCD
PCDDNCKO_00578 1.4e-215 yeaN P COG2807 Cyanate permease
PCDDNCKO_00579 2.6e-49 sugE P Small Multidrug Resistance protein
PCDDNCKO_00580 1.5e-50 ykkC P Small Multidrug Resistance protein
PCDDNCKO_00581 2e-103 yvdT K Transcriptional regulator
PCDDNCKO_00582 1.2e-296 yveA E amino acid
PCDDNCKO_00583 5.1e-164 ydhU P Catalase
PCDDNCKO_00584 3.9e-81 yndB S Activator of Hsp90 ATPase homolog 1-like protein
PCDDNCKO_00585 1.8e-184 yhfP 1.1.1.1 C Quinone oxidoreductase
PCDDNCKO_00586 6.6e-249 iolT EGP Major facilitator Superfamily
PCDDNCKO_00589 3.4e-39 S COG NOG14552 non supervised orthologous group
PCDDNCKO_00590 7.8e-08
PCDDNCKO_00592 2.4e-181 thiL 2.7.4.16 H Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
PCDDNCKO_00593 4.5e-85 ydiB 2.7.1.221, 5.1.1.1 S ATPase or kinase
PCDDNCKO_00594 1.3e-125 yeaZ 2.3.1.234 O COG1214 Inactive homolog of metal-dependent proteases
PCDDNCKO_00595 2.4e-83 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PCDDNCKO_00596 3e-190 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PCDDNCKO_00597 0.0 ydiF S ABC transporter
PCDDNCKO_00598 1.2e-88 moaC 4.6.1.17 H Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
PCDDNCKO_00599 3e-116 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PCDDNCKO_00600 1.7e-18 tatA U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
PCDDNCKO_00601 3.2e-125 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PCDDNCKO_00602 1.7e-27 ydiK S Domain of unknown function (DUF4305)
PCDDNCKO_00603 2.1e-126 ydiL S CAAX protease self-immunity
PCDDNCKO_00604 1.3e-42 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PCDDNCKO_00605 7.5e-281 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PCDDNCKO_00606 1.5e-24 S Protein of unknown function (DUF4064)
PCDDNCKO_00608 0.0 K NB-ARC domain
PCDDNCKO_00609 7.2e-200 gutB 1.1.1.14 E Dehydrogenase
PCDDNCKO_00610 5.8e-250 gutA G MFS/sugar transport protein
PCDDNCKO_00611 2.9e-171 ydjE 2.7.1.4 G pfkB family carbohydrate kinase
PCDDNCKO_00612 2.3e-29 yjdJ S Domain of unknown function (DUF4306)
PCDDNCKO_00613 2.8e-112 pspA KT Phage shock protein A
PCDDNCKO_00614 6.8e-179 ydjG 3.6.4.12 L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PCDDNCKO_00615 3.1e-120 ydjH S COG1512 Beta-propeller domains of methanol dehydrogenase type
PCDDNCKO_00616 7.6e-151 ydjI S virion core protein (lumpy skin disease virus)
PCDDNCKO_00617 0.0 yrhL I Acyltransferase family
PCDDNCKO_00618 1.4e-145 rsiV S Protein of unknown function (DUF3298)
PCDDNCKO_00619 4.3e-86 sigV K Belongs to the sigma-70 factor family. ECF subfamily
PCDDNCKO_00620 8.9e-195 bdhA 1.1.1.303, 1.1.1.4 E Dehydrogenase
PCDDNCKO_00621 4.2e-62 ydjM M Lytic transglycolase
PCDDNCKO_00622 9.4e-136 ydjN U Involved in the tonB-independent uptake of proteins
PCDDNCKO_00624 7.2e-35 ydjO S Cold-inducible protein YdjO
PCDDNCKO_00625 0.0 cotA 1.10.3.4, 1.16.3.3 Q multicopper oxidases
PCDDNCKO_00626 5.6e-245 gabP E COG1113 Gamma-aminobutyrate permease and related permeases
PCDDNCKO_00627 4.9e-154 yeaB P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PCDDNCKO_00628 3.5e-177 yeaC S COG0714 MoxR-like ATPases
PCDDNCKO_00629 2.8e-213 yeaD S conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
PCDDNCKO_00630 0.0 yebA E COG1305 Transglutaminase-like enzymes
PCDDNCKO_00631 1.2e-301 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PCDDNCKO_00632 7.6e-140 6.3.4.18, 6.3.5.5 F 5-(carboxyamino)imidazole ribonucleotide synthase activity
PCDDNCKO_00633 8.7e-117 F ATP-grasp domain
PCDDNCKO_00634 3.9e-106 pphA 5.4.2.9 G Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
PCDDNCKO_00635 4.1e-135 aspC 2.6.1.1 E DegT/DnrJ/EryC1/StrS aminotransferase family
PCDDNCKO_00636 5.1e-149 yqjV G Major Facilitator Superfamily
PCDDNCKO_00637 7.8e-94 sigV K Belongs to the sigma-70 factor family. ECF subfamily
PCDDNCKO_00638 2.1e-247 S Domain of unknown function (DUF4179)
PCDDNCKO_00639 6.2e-209 pbuG S permease
PCDDNCKO_00640 6.2e-132 yebC M Membrane
PCDDNCKO_00642 3.4e-92 yebE S UPF0316 protein
PCDDNCKO_00643 5.5e-29 yebG S NETI protein
PCDDNCKO_00644 2.5e-83 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PCDDNCKO_00645 3.6e-224 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PCDDNCKO_00646 1.6e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PCDDNCKO_00647 1.8e-130 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PCDDNCKO_00648 2.2e-38 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PCDDNCKO_00649 2.3e-130 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PCDDNCKO_00650 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PCDDNCKO_00651 8e-271 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PCDDNCKO_00652 2.7e-183 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PCDDNCKO_00653 4.8e-105 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PCDDNCKO_00654 6e-288 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PCDDNCKO_00655 8.2e-235 purD 6.3.4.13 F Belongs to the GARS family
PCDDNCKO_00656 1.2e-25 S Protein of unknown function (DUF2892)
PCDDNCKO_00657 0.0 yerA 3.5.4.2 F adenine deaminase
PCDDNCKO_00658 4.4e-191 yerB S Protein of unknown function (DUF3048) C-terminal domain
PCDDNCKO_00659 2.4e-50 yerC S protein conserved in bacteria
PCDDNCKO_00660 5.7e-302 yerD 1.4.7.1 E Belongs to the glutamate synthase family
PCDDNCKO_00661 4e-127 pcrB I 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
PCDDNCKO_00662 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PCDDNCKO_00663 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PCDDNCKO_00664 2.3e-223 camS S COG4851 Protein involved in sex pheromone biosynthesis
PCDDNCKO_00666 7.2e-194 yerI S homoserine kinase type II (protein kinase fold)
PCDDNCKO_00667 1.3e-120 sapB S MgtC SapB transporter
PCDDNCKO_00668 4.1e-262 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PCDDNCKO_00669 1.6e-45 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PCDDNCKO_00670 1.6e-274 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PCDDNCKO_00671 5.2e-270 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PCDDNCKO_00672 4.5e-152 yerO K Transcriptional regulator
PCDDNCKO_00673 0.0 swrC V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PCDDNCKO_00674 1.9e-169 yegS 2.7.1.107 I COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
PCDDNCKO_00675 1.3e-254 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PCDDNCKO_00676 5.5e-78
PCDDNCKO_00677 8.1e-311 L Uncharacterized conserved protein (DUF2075)
PCDDNCKO_00678 6.5e-160 cylA V AAA domain, putative AbiEii toxin, Type IV TA system
PCDDNCKO_00679 4.6e-136 cylB V ABC-2 type transporter
PCDDNCKO_00680 1.4e-13 S Protein of unknown function, DUF600
PCDDNCKO_00681 2.4e-62 S Protein of unknown function, DUF600
PCDDNCKO_00682 1.7e-49 S Protein of unknown function, DUF600
PCDDNCKO_00683 9.4e-51 S Protein of unknown function, DUF600
PCDDNCKO_00684 7.7e-53 S Protein of unknown function, DUF600
PCDDNCKO_00685 5.9e-92 L nucleic acid phosphodiester bond hydrolysis
PCDDNCKO_00686 3.9e-42 S Immunity protein 22
PCDDNCKO_00687 8.7e-31
PCDDNCKO_00688 2.4e-254 yobL S Bacterial EndoU nuclease
PCDDNCKO_00689 2.1e-126 yeeN K transcriptional regulatory protein
PCDDNCKO_00692 1.1e-108 aadK G Streptomycin adenylyltransferase
PCDDNCKO_00693 1.2e-44 cotJA S Spore coat associated protein JA (CotJA)
PCDDNCKO_00694 3.3e-45 cotJB S CotJB protein
PCDDNCKO_00695 8.9e-104 cotJC P Spore Coat
PCDDNCKO_00696 3e-93 yesJ K Acetyltransferase (GNAT) family
PCDDNCKO_00698 8.2e-120 yetF S membrane
PCDDNCKO_00699 5.7e-55 isdI 1.14.99.48, 1.14.99.57 S Antibiotic biosynthesis monooxygenase
PCDDNCKO_00700 2e-64 yetH E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PCDDNCKO_00701 2.7e-152 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PCDDNCKO_00702 2.9e-137 sbp P COG1613 ABC-type sulfate transport system, periplasmic component
PCDDNCKO_00703 4.5e-112 cysT O COG0555 ABC-type sulfate transport system, permease component
PCDDNCKO_00704 1.3e-103 cysW P COG4208 ABC-type sulfate transport system, permease component
PCDDNCKO_00705 5.9e-133 cysA 3.6.3.25, 3.6.3.29 P Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
PCDDNCKO_00706 1.2e-22 yezD S Uncharacterized small protein (DUF2292)
PCDDNCKO_00707 1.8e-55 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase activity
PCDDNCKO_00708 8.2e-106 yetJ S Belongs to the BI1 family
PCDDNCKO_00709 1.3e-90 yetL K helix_turn_helix multiple antibiotic resistance protein
PCDDNCKO_00710 1.7e-207 yetM CH FAD binding domain
PCDDNCKO_00711 7.5e-197 yetN S Protein of unknown function (DUF3900)
PCDDNCKO_00712 0.0 cypD 1.14.14.1, 1.6.2.4 C Belongs to the cytochrome P450 family
PCDDNCKO_00714 5.8e-49 MA20_23570 K Winged helix DNA-binding domain
PCDDNCKO_00715 4.5e-163 V ATPases associated with a variety of cellular activities
PCDDNCKO_00716 8.2e-126 V ABC-2 type transporter
PCDDNCKO_00717 8.1e-70 S protein homooligomerization
PCDDNCKO_00718 6.6e-125
PCDDNCKO_00719 1.3e-182 S ATP diphosphatase activity
PCDDNCKO_00720 9.9e-263 S YcaO cyclodehydratase, ATP-ad Mg2+-binding
PCDDNCKO_00721 1.7e-153 sagB C Nitroreductase family
PCDDNCKO_00722 2.8e-112 S CAAX protease self-immunity
PCDDNCKO_00723 3e-145 2.1.1.163, 2.1.1.201 Q methyltransferase
PCDDNCKO_00724 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
PCDDNCKO_00725 3.3e-146 rfbF 2.7.7.33 JM Nucleotidyl transferase
PCDDNCKO_00726 2.4e-172 yfnG 4.2.1.45 M dehydratase
PCDDNCKO_00727 9.3e-180 yfnF M Nucleotide-diphospho-sugar transferase
PCDDNCKO_00728 2.5e-222 yfnE 2.4.1.338 GT2 S Glycosyltransferase like family 2
PCDDNCKO_00729 2.4e-186 yfnD M Nucleotide-diphospho-sugar transferase
PCDDNCKO_00730 1e-218 fsr P COG0477 Permeases of the major facilitator superfamily
PCDDNCKO_00731 1.9e-245 yfnA E amino acid
PCDDNCKO_00732 2e-277 yfmT 1.2.1.3, 1.2.1.67 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PCDDNCKO_00733 1.4e-100 yfmS NT chemotaxis protein
PCDDNCKO_00734 1.2e-166 IQ Enoyl-(Acyl carrier protein) reductase
PCDDNCKO_00735 3.2e-208 M COG0463 Glycosyltransferases involved in cell wall biogenesis
PCDDNCKO_00736 0.0 yfmR S COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PCDDNCKO_00737 1.8e-69 yfmP K transcriptional
PCDDNCKO_00738 4.7e-208 yfmO EGP Major facilitator Superfamily
PCDDNCKO_00739 4.2e-297 yfmM S COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PCDDNCKO_00740 1.8e-204 yfmL 3.6.4.13 L COG0513 Superfamily II DNA and RNA helicases
PCDDNCKO_00741 1e-41 yfmK 2.3.1.128 K acetyltransferase
PCDDNCKO_00742 2.1e-188 yfmJ S N-terminal domain of oxidoreductase
PCDDNCKO_00743 1.2e-24 S Protein of unknown function (DUF3212)
PCDDNCKO_00744 1.3e-57 yflT S Heat induced stress protein YflT
PCDDNCKO_00745 1.9e-239 pel 4.2.2.10, 4.2.2.2 G Pectate lyase
PCDDNCKO_00746 3.5e-234 yflS P Sodium:sulfate symporter transmembrane region
PCDDNCKO_00747 1e-27 Q PFAM Collagen triple helix
PCDDNCKO_00749 9.2e-15 Q calcium- and calmodulin-responsive adenylate cyclase activity
PCDDNCKO_00752 3.3e-23 M1-820 Q Collagen triple helix repeat (20 copies)
PCDDNCKO_00753 6.8e-24 M1-820 Q Collagen triple helix repeat (20 copies)
PCDDNCKO_00754 0.0 ywpD T PhoQ Sensor
PCDDNCKO_00755 6.3e-151 M1-574 T Transcriptional regulatory protein, C terminal
PCDDNCKO_00756 0.0 M1-568 M cell wall anchor domain
PCDDNCKO_00757 4.6e-80 srtA 3.4.22.70 M Sortase family
PCDDNCKO_00758 2e-270 citS 2.7.13.3 T Signal transduction histidine kinase regulating citrate malate metabolism
PCDDNCKO_00759 4.7e-120 citT T response regulator
PCDDNCKO_00760 8.3e-179 yflP S Tripartite tricarboxylate transporter family receptor
PCDDNCKO_00761 1.4e-226 citM C Citrate transporter
PCDDNCKO_00762 3.3e-149 yflN S COG0491 Zn-dependent hydrolases, including glyoxylases
PCDDNCKO_00763 1.3e-217 nos 1.14.14.47 C Belongs to the NOS family. Bacterial NOS oxygenase subfamily
PCDDNCKO_00764 2.9e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PCDDNCKO_00765 2.2e-122 yflK S protein conserved in bacteria
PCDDNCKO_00766 1.5e-14 yflJ S Protein of unknown function (DUF2639)
PCDDNCKO_00767 7e-19 yflI
PCDDNCKO_00768 3.1e-50 yflH S Protein of unknown function (DUF3243)
PCDDNCKO_00769 1.4e-136 map 3.4.11.18 E Methionine aminopeptidase
PCDDNCKO_00770 3.3e-245 nagE 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G COG1263 Phosphotransferase system IIC components, glucose maltose N-acetylglucosamine-specific
PCDDNCKO_00771 6.3e-73 yfmQ S Uncharacterised protein from bacillus cereus group
PCDDNCKO_00772 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
PCDDNCKO_00773 7.8e-64 yhdN S Domain of unknown function (DUF1992)
PCDDNCKO_00774 9.8e-79 cotP O Belongs to the small heat shock protein (HSP20) family
PCDDNCKO_00775 3.6e-38 ydgA S Spore germination protein gerPA/gerPF
PCDDNCKO_00776 3e-38 ydgB S Spore germination protein gerPA/gerPF
PCDDNCKO_00777 2.5e-240 treP 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PCDDNCKO_00778 0.0 treC 3.2.1.93 GH13 G COG0366 Glycosidases
PCDDNCKO_00779 9e-130 treR K transcriptional
PCDDNCKO_00780 1.2e-123 yfkO C nitroreductase
PCDDNCKO_00781 9.3e-125 yibF S YibE/F-like protein
PCDDNCKO_00782 3.6e-194 yibE S YibE/F-like protein
PCDDNCKO_00783 0.0 cpdB 3.1.3.5, 3.1.3.6, 3.1.4.16 F COG0737 5'-nucleotidase 2',3'-cyclic phosphodiesterase and related esterases
PCDDNCKO_00784 1.6e-91 yfkM 1.11.1.6, 3.5.1.124 S protease
PCDDNCKO_00785 5.2e-187 K helix_turn _helix lactose operon repressor
PCDDNCKO_00786 1.1e-164 aroE 1.1.1.25, 1.1.1.282, 1.3.5.4 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PCDDNCKO_00787 3.4e-135 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PCDDNCKO_00788 2.1e-192 ydiM EGP Major facilitator Superfamily
PCDDNCKO_00789 2.7e-29 yfkK S Belongs to the UPF0435 family
PCDDNCKO_00790 1.2e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PCDDNCKO_00791 7.7e-52 yfkI S gas vesicle protein
PCDDNCKO_00792 6.8e-145 yihY S Belongs to the UPF0761 family
PCDDNCKO_00794 3.2e-217 ycaD EGP COG0477 Permeases of the major facilitator superfamily
PCDDNCKO_00795 1.3e-185 cax P COG0387 Ca2 H antiporter
PCDDNCKO_00796 7.1e-144 yfkD S YfkD-like protein
PCDDNCKO_00797 3e-145 yfkC M Mechanosensitive ion channel
PCDDNCKO_00798 6e-221 yfkA S YfkB-like domain
PCDDNCKO_00799 4.9e-27 yfjT
PCDDNCKO_00800 9e-155 pdaA G deacetylase
PCDDNCKO_00801 1.2e-147 yfjR 1.1.1.31 I NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
PCDDNCKO_00802 1e-31
PCDDNCKO_00803 9.4e-183 corA P Mediates influx of magnesium ions
PCDDNCKO_00804 3.1e-161 yfjP 3.2.2.21 L COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
PCDDNCKO_00805 1.3e-268 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PCDDNCKO_00807 3.9e-44 S YfzA-like protein
PCDDNCKO_00809 2.7e-193 yfjN J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PCDDNCKO_00810 4.4e-88 yfjM S Psort location Cytoplasmic, score
PCDDNCKO_00811 4.9e-190 acoA C COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PCDDNCKO_00812 2.5e-189 acoB C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PCDDNCKO_00813 6.6e-210 acoC 2.3.1.12, 2.3.1.61 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PCDDNCKO_00814 2.3e-251 acoL 1.8.1.4 C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PCDDNCKO_00815 0.0 acoR KQ COG3284 Transcriptional activator of acetoin glycerol metabolism
PCDDNCKO_00816 4.2e-15 sspH S Belongs to the SspH family
PCDDNCKO_00817 1.9e-261 aglB 3.2.1.122, 3.2.1.22, 3.2.1.86 GH4,GT4 G COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
PCDDNCKO_00818 1.5e-138 glvR F Helix-turn-helix domain, rpiR family
PCDDNCKO_00819 5.4e-292 glvC 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PCDDNCKO_00820 0.0 yfiB3 V ABC transporter
PCDDNCKO_00821 0.0 yfiC V COG1132 ABC-type multidrug transport system, ATPase and permease components
PCDDNCKO_00822 2.4e-63 mhqP S DoxX
PCDDNCKO_00823 4.8e-148 yfiE 1.13.11.2 S glyoxalase
PCDDNCKO_00824 7.9e-166 cyoE 2.5.1.141 O Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
PCDDNCKO_00825 6.6e-96 padR K transcriptional
PCDDNCKO_00826 1.9e-112 1.6.5.2 S NADPH-dependent FMN reductase
PCDDNCKO_00827 7.7e-181 yfiQ G COG3936 Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
PCDDNCKO_00828 0.0 2.7.9.2 GT phosphoenolpyruvate synthase
PCDDNCKO_00829 9.9e-45 yrdF K ribonuclease inhibitor
PCDDNCKO_00830 1.1e-98 yfiT S Belongs to the metal hydrolase YfiT family
PCDDNCKO_00831 3.6e-288 yfiU EGP Major facilitator Superfamily
PCDDNCKO_00832 9.5e-83 yfiV K transcriptional
PCDDNCKO_00833 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PCDDNCKO_00834 2.4e-164 yfhB 5.3.3.17 S PhzF family
PCDDNCKO_00835 3.3e-106 yfhC C nitroreductase
PCDDNCKO_00836 4.7e-25 yfhD S YfhD-like protein
PCDDNCKO_00838 2e-166 yfhF S nucleoside-diphosphate sugar epimerase
PCDDNCKO_00839 1.5e-141 recX 2.4.1.337 GT4 S Modulates RecA activity
PCDDNCKO_00840 8.8e-53 yfhH S Protein of unknown function (DUF1811)
PCDDNCKO_00841 4.5e-206 yfhI EGP Major facilitator Superfamily
PCDDNCKO_00843 4e-167 mpr 3.4.21.19 M Belongs to the peptidase S1B family
PCDDNCKO_00844 2.2e-44 yfhJ S WVELL protein
PCDDNCKO_00845 1e-93 batE T Bacterial SH3 domain homologues
PCDDNCKO_00846 2.6e-34 yfhL S SdpI/YhfL protein family
PCDDNCKO_00847 1.4e-169 yfhM S Alpha/beta hydrolase family
PCDDNCKO_00848 4.6e-185 csbB GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
PCDDNCKO_00849 0.0 yfhO S Bacterial membrane protein YfhO
PCDDNCKO_00850 5.1e-184 yfhP S membrane-bound metal-dependent
PCDDNCKO_00851 1.1e-208 mutY L A G-specific
PCDDNCKO_00852 2.4e-36 yfhS
PCDDNCKO_00853 5.8e-135 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PCDDNCKO_00855 1.5e-37 ygaB S YgaB-like protein
PCDDNCKO_00856 2.2e-104 ygaC J Belongs to the UPF0374 family
PCDDNCKO_00857 4.2e-306 ygaD V ABC transporter
PCDDNCKO_00858 3.2e-179 ygaE S Membrane
PCDDNCKO_00859 6.2e-246 gsaB 5.4.3.8 H Glutamate-1-semialdehyde aminotransferase
PCDDNCKO_00860 3.1e-86 bcp 1.11.1.15 O Peroxiredoxin
PCDDNCKO_00861 1.8e-80 perR P Belongs to the Fur family
PCDDNCKO_00862 1.5e-56 ygzB S UPF0295 protein
PCDDNCKO_00863 8.2e-165 ygxA S Nucleotidyltransferase-like
PCDDNCKO_00864 3.4e-39 S COG NOG14552 non supervised orthologous group
PCDDNCKO_00869 7.8e-08
PCDDNCKO_00877 1.6e-08
PCDDNCKO_00881 1.3e-207 C Na+/H+ antiporter family
PCDDNCKO_00882 2e-33 C Na+/H+ antiporter family
PCDDNCKO_00883 3.6e-131 pepE 3.4.11.2, 3.4.13.21 E Belongs to the peptidase S51 family
PCDDNCKO_00884 0.0 thiC 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PCDDNCKO_00885 1.3e-265 ygaK C Berberine and berberine like
PCDDNCKO_00887 9.8e-231 oppA5 E PFAM extracellular solute-binding protein family 5
PCDDNCKO_00888 5.4e-138 appB P Binding-protein-dependent transport system inner membrane component
PCDDNCKO_00889 3.1e-127 appC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PCDDNCKO_00890 7.5e-135 oppD3 P Belongs to the ABC transporter superfamily
PCDDNCKO_00891 6.2e-134 oppF3 E Belongs to the ABC transporter superfamily
PCDDNCKO_00892 2.1e-290 katA 1.11.1.6 P serves to protect cells from the toxic effects of hydrogen peroxide
PCDDNCKO_00893 4.9e-184 S Amidohydrolase
PCDDNCKO_00894 4.2e-141 ssuB P COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component
PCDDNCKO_00895 2.9e-179 ssuA M Sulfonate ABC transporter
PCDDNCKO_00896 9.8e-144 ssuC P ABC transporter (permease)
PCDDNCKO_00897 1.2e-213 ssuD 1.14.14.5 C Catalyzes the desulfonation of aliphatic sulfonates
PCDDNCKO_00898 1.2e-42 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PCDDNCKO_00899 8.6e-81 ygaO
PCDDNCKO_00900 4.8e-23 K Transcriptional regulator
PCDDNCKO_00902 4.8e-111 yhzB S B3/4 domain
PCDDNCKO_00903 1.3e-223 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PCDDNCKO_00904 4.5e-174 yhbB S Putative amidase domain
PCDDNCKO_00905 2e-85 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PCDDNCKO_00906 3.5e-109 yhbD K Protein of unknown function (DUF4004)
PCDDNCKO_00907 8.6e-64 yhbE M COG1664 Integral membrane protein CcmA involved in cell shape determination
PCDDNCKO_00908 1.3e-64 yhbF M COG1664 Integral membrane protein CcmA involved in cell shape determination
PCDDNCKO_00910 0.0 prkA T Ser protein kinase
PCDDNCKO_00911 3.9e-215 yhbH S Belongs to the UPF0229 family
PCDDNCKO_00912 4.6e-74 yhbI K DNA-binding transcription factor activity
PCDDNCKO_00913 8.1e-98 yhbJ V COG1566 Multidrug resistance efflux pump
PCDDNCKO_00914 8.4e-285 yhcA EGP Major facilitator Superfamily
PCDDNCKO_00915 4.7e-99 yhcB 1.6.5.2 S NADPH-dependent FMN reductase
PCDDNCKO_00916 7.2e-54 yhcC
PCDDNCKO_00917 6.2e-52
PCDDNCKO_00918 4.7e-61 yhcF K Transcriptional regulator
PCDDNCKO_00919 6.1e-126 yhcG V ABC transporter, ATP-binding protein
PCDDNCKO_00920 4.1e-167 yhcH V ABC transporter, ATP-binding protein
PCDDNCKO_00921 3.7e-163 yhcI S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PCDDNCKO_00922 3.9e-30 cspB K 'Cold-shock' DNA-binding domain
PCDDNCKO_00923 8.8e-145 metQ M Belongs to the nlpA lipoprotein family
PCDDNCKO_00924 3.9e-185 yhcK 2.7.7.65 T COG2199 FOG GGDEF domain
PCDDNCKO_00925 1.9e-229 ydjN U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PCDDNCKO_00926 3.9e-51 yhcM
PCDDNCKO_00927 5.7e-84 yhcN S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PCDDNCKO_00928 3.3e-161 yhcP
PCDDNCKO_00929 7.6e-115 yhcQ M Spore coat protein
PCDDNCKO_00930 0.0 yhcR 3.1.3.5 F Belongs to the 5'-nucleotidase family
PCDDNCKO_00931 1.5e-106 yhcS 3.4.22.70 M COG3764 Sortase (surface protein transpeptidase)
PCDDNCKO_00932 1.1e-169 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PCDDNCKO_00933 1.3e-69 yhcU S Family of unknown function (DUF5365)
PCDDNCKO_00934 2.6e-68 yhcV S COG0517 FOG CBS domain
PCDDNCKO_00935 4.9e-125 yhcW 5.4.2.6 S hydrolase
PCDDNCKO_00936 1.1e-302 yhcX 3.5.1.3 K Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
PCDDNCKO_00937 3.2e-261 yhxA E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PCDDNCKO_00938 8.9e-104 glpP K Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
PCDDNCKO_00939 1.9e-147 glpF G Belongs to the MIP aquaporin (TC 1.A.8) family
PCDDNCKO_00940 5.4e-294 glpK 2.7.1.30 C Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PCDDNCKO_00941 0.0 glpD 1.1.5.3 C Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
PCDDNCKO_00942 0.0 pmmB 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
PCDDNCKO_00943 3.2e-206 yhcY 2.7.13.3 T Histidine kinase
PCDDNCKO_00944 1.4e-110 yhcZ K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PCDDNCKO_00945 1.1e-87 azr 1.7.1.6 S NADPH-dependent FMN reductase
PCDDNCKO_00946 2.5e-39 yhdB S YhdB-like protein
PCDDNCKO_00947 9e-53 yhdC S Protein of unknown function (DUF3889)
PCDDNCKO_00948 4.7e-218 sle1 3.5.1.28 CBM50 M COG1388 FOG LysM repeat
PCDDNCKO_00949 1.2e-73 nsrR K Transcriptional regulator
PCDDNCKO_00950 1.3e-255 ygxB M Conserved TM helix
PCDDNCKO_00951 3.6e-271 ycgB S Stage V sporulation protein R
PCDDNCKO_00952 1.5e-258 phoB 3.1.3.1 P Belongs to the alkaline phosphatase family
PCDDNCKO_00953 6.3e-127 lytE 3.5.1.28 CBM50 M COG1388 FOG LysM repeat
PCDDNCKO_00954 5.8e-163 citR K Transcriptional regulator
PCDDNCKO_00955 4.6e-205 citA 2.3.3.1 C Belongs to the citrate synthase family
PCDDNCKO_00956 4.6e-160 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PCDDNCKO_00957 2e-250 yhdG E amino acid
PCDDNCKO_00958 2.2e-198 yhdH S Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
PCDDNCKO_00959 8.1e-45 yhdK S Sigma-M inhibitor protein
PCDDNCKO_00960 1.5e-200 yhdL S Sigma factor regulator N-terminal
PCDDNCKO_00961 4.2e-86 sigM K Belongs to the sigma-70 factor family. ECF subfamily
PCDDNCKO_00962 5.1e-110 plsC 2.3.1.51 I Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
PCDDNCKO_00963 1.6e-241 corC1 S COG1253 Hemolysins and related proteins containing CBS domains
PCDDNCKO_00964 4.3e-71 cueR K transcriptional
PCDDNCKO_00965 1.1e-225 yhdR 2.6.1.1 E Aminotransferase
PCDDNCKO_00966 5.6e-236 pksF 2.3.1.179, 2.3.1.41 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PCDDNCKO_00967 2.9e-257 corC1 P COG1253 Hemolysins and related proteins containing CBS domains
PCDDNCKO_00968 1.2e-50 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PCDDNCKO_00969 1.9e-60 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PCDDNCKO_00970 2.2e-128 yhdW 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PCDDNCKO_00972 1e-204 yhdY M Mechanosensitive ion channel
PCDDNCKO_00973 1e-139 cobB K NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form
PCDDNCKO_00974 3e-156 yheN G deacetylase
PCDDNCKO_00975 1.8e-153 dat 2.6.1.21 E Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in the first half-reaction
PCDDNCKO_00976 4.6e-88 pksA K Transcriptional regulator
PCDDNCKO_00977 3.1e-93 ymcC S Membrane
PCDDNCKO_00978 2.1e-85 T universal stress protein
PCDDNCKO_00980 0.0 yheI V COG1132 ABC-type multidrug transport system, ATPase and permease components
PCDDNCKO_00981 0.0 yheH V COG1132 ABC-type multidrug transport system, ATPase and permease components
PCDDNCKO_00982 9.9e-81 S AAA ATPase domain
PCDDNCKO_00983 1.6e-14
PCDDNCKO_00984 6.2e-111 yheG GM NAD(P)H-binding
PCDDNCKO_00986 2.9e-28 sspB S spore protein
PCDDNCKO_00987 1.7e-36 yheE S Family of unknown function (DUF5342)
PCDDNCKO_00988 3e-259 gshB 6.3.2.2, 6.3.2.3 HJ YheC/D like ATP-grasp
PCDDNCKO_00989 1.8e-214 yheC HJ YheC/D like ATP-grasp
PCDDNCKO_00990 7.9e-205 yheB S Belongs to the UPF0754 family
PCDDNCKO_00991 4.4e-53 yheA S Belongs to the UPF0342 family
PCDDNCKO_00992 2.8e-202 yhaZ L DNA alkylation repair enzyme
PCDDNCKO_00993 1.9e-158 yhaX S haloacid dehalogenase-like hydrolase
PCDDNCKO_00994 3.5e-293 hemZ H coproporphyrinogen III oxidase
PCDDNCKO_00995 1.2e-249 iucD 1.14.13.59 Q L-lysine 6-monooxygenase (NADPH-requiring)
PCDDNCKO_00996 8.2e-208 yhaU P COG0475 Kef-type K transport systems, membrane components
PCDDNCKO_00997 7.8e-88 yhaT P regulatory, ligand-binding protein related to C-terminal domains of K channels
PCDDNCKO_00999 9e-136 yhaR 5.3.3.18 I enoyl-CoA hydratase
PCDDNCKO_01000 2.8e-14 S YhzD-like protein
PCDDNCKO_01001 1.8e-167 yhaQ S ABC transporter, ATP-binding protein
PCDDNCKO_01002 8.8e-205 yhaP CP COG1668 ABC-type Na efflux pump, permease component
PCDDNCKO_01003 2.1e-235 yhaO L DNA repair exonuclease
PCDDNCKO_01004 0.0 yhaN L AAA domain
PCDDNCKO_01005 2.6e-177 yhaM L Shows a 3'-5' exoribonuclease activity
PCDDNCKO_01006 1.6e-32 yhaL S Sporulation protein YhaL
PCDDNCKO_01007 1.1e-121 prsA 5.2.1.8 M plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PCDDNCKO_01008 7e-95 yhaK S Putative zincin peptidase
PCDDNCKO_01009 9.9e-55 yhaI S Protein of unknown function (DUF1878)
PCDDNCKO_01010 8.6e-113 hpr K Negative regulator of protease production and sporulation
PCDDNCKO_01011 2.4e-38 yhaH S YtxH-like protein
PCDDNCKO_01012 2e-17
PCDDNCKO_01013 3.8e-77 trpP S Tryptophan transporter TrpP
PCDDNCKO_01014 1.7e-201 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PCDDNCKO_01015 2.4e-80 hit FG COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
PCDDNCKO_01016 1.1e-135 ecsA V transporter (ATP-binding protein)
PCDDNCKO_01017 1.5e-220 ecsB U ABC transporter
PCDDNCKO_01018 7.3e-124 ecsC S EcsC protein family
PCDDNCKO_01019 1.8e-223 yhaA 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
PCDDNCKO_01020 2e-242 yhfA C membrane
PCDDNCKO_01021 6.4e-90 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
PCDDNCKO_01022 0.0 pbpF 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PCDDNCKO_01023 3.3e-203 hemE 4.1.1.37 H Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
PCDDNCKO_01024 6.2e-179 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
PCDDNCKO_01025 1e-273 hemG 1.14.19.9, 1.3.3.15, 1.3.3.4 H Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
PCDDNCKO_01026 3.2e-101 yhgD K Transcriptional regulator
PCDDNCKO_01027 2.1e-276 yhgE S YhgE Pip N-terminal domain protein
PCDDNCKO_01028 1.1e-181 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PCDDNCKO_01030 2.5e-197 yhfE 3.2.1.4 GH5,GH9 G peptidase M42
PCDDNCKO_01031 7.4e-223 gltP C Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PCDDNCKO_01032 2.9e-139 yhfI S COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III
PCDDNCKO_01033 5.9e-188 lplJ 6.3.1.20 H Lipoate-protein ligase
PCDDNCKO_01034 1.4e-110 yhfK GM NmrA-like family
PCDDNCKO_01035 6.4e-298 fadD 6.2.1.3 IQ AMP-binding enzyme C-terminal domain
PCDDNCKO_01036 1.9e-65 yhfM
PCDDNCKO_01037 3.6e-235 yhfN 3.4.24.84 O Peptidase M48
PCDDNCKO_01038 1.2e-203 aprE 3.4.21.62 O Belongs to the peptidase S8 family
PCDDNCKO_01039 5.1e-151 yhfQ P COG4594 ABC-type Fe3 -citrate transport system, periplasmic component
PCDDNCKO_01040 9.9e-103 yhfR 3.1.3.73 G Belongs to the phosphoglycerate mutase family
PCDDNCKO_01041 7.4e-200 vraB 2.3.1.9 I Belongs to the thiolase family
PCDDNCKO_01042 1.5e-277 yhfT 6.2.1.3 IQ AMP-binding enzyme C-terminal domain
PCDDNCKO_01043 3.5e-89 bioY S BioY family
PCDDNCKO_01044 4.4e-199 hemAT NT chemotaxis protein
PCDDNCKO_01045 4.8e-298 yhfW CE COG0665 Glycine D-amino acid oxidases (deaminating)
PCDDNCKO_01046 3.8e-159 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PCDDNCKO_01047 1.8e-31 yhzC S IDEAL
PCDDNCKO_01048 1.9e-109 comK K Competence transcription factor
PCDDNCKO_01049 2.5e-67 frataxin S Domain of unknown function (DU1801)
PCDDNCKO_01050 1.7e-63 frataxin S Domain of unknown function (DU1801)
PCDDNCKO_01051 1.7e-90 mepB S MepB protein
PCDDNCKO_01052 5.1e-125 yrpD S Domain of unknown function, YrpD
PCDDNCKO_01053 1.6e-42 yhjA S Excalibur calcium-binding domain
PCDDNCKO_01054 3.3e-47 S Belongs to the UPF0145 family
PCDDNCKO_01055 5.5e-267 yhjB E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PCDDNCKO_01056 1.4e-27 yhjC S Protein of unknown function (DUF3311)
PCDDNCKO_01057 5e-60 yhjD
PCDDNCKO_01058 2.2e-108 yhjE S SNARE associated Golgi protein
PCDDNCKO_01059 9.2e-92 sipV 3.4.21.89 U Belongs to the peptidase S26 family
PCDDNCKO_01060 1.1e-275 yhjG CH FAD binding domain
PCDDNCKO_01061 5.8e-94 yhjH K helix_turn_helix multiple antibiotic resistance protein
PCDDNCKO_01062 2e-187 abrB S membrane
PCDDNCKO_01063 3.5e-203 blt EGP Major facilitator Superfamily
PCDDNCKO_01064 2.2e-108 K QacR-like protein, C-terminal region
PCDDNCKO_01065 9.7e-94 yhjR S Rubrerythrin
PCDDNCKO_01066 7.9e-82 ydfS S Protein of unknown function (DUF421)
PCDDNCKO_01067 3.9e-19 ydfS S Protein of unknown function (DUF421)
PCDDNCKO_01068 0.0 addB 3.1.21.3, 3.6.4.12 L ATP-dependent helicase deoxyribonuclease subunit B
PCDDNCKO_01069 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PCDDNCKO_01070 3e-223 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PCDDNCKO_01071 0.0 sbcC L COG0419 ATPase involved in DNA repair
PCDDNCKO_01072 4.6e-48 yisB V COG1403 Restriction endonuclease
PCDDNCKO_01073 5.9e-32 gerPF S Spore germination protein gerPA/gerPF
PCDDNCKO_01074 1.2e-62 gerPE S Spore germination protein GerPE
PCDDNCKO_01075 1.2e-22 gerPD S Spore germination protein
PCDDNCKO_01076 9.1e-62 gerPC S Spore germination protein
PCDDNCKO_01077 6.2e-35 gerPB S cell differentiation
PCDDNCKO_01078 8.4e-34 gerPA S Spore germination protein
PCDDNCKO_01079 5e-07 yisI S Spo0E like sporulation regulatory protein
PCDDNCKO_01080 1.2e-171 yisK Q COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
PCDDNCKO_01081 3.2e-59 yisL S UPF0344 protein
PCDDNCKO_01082 2e-97 yisN S Protein of unknown function (DUF2777)
PCDDNCKO_01083 0.0 asnO 6.3.5.4 E Asparagine synthase
PCDDNCKO_01084 1.9e-130 crtB 2.5.1.21, 2.5.1.32, 2.5.1.99 I phytoene
PCDDNCKO_01085 9.5e-245 yisQ V Mate efflux family protein
PCDDNCKO_01086 1.2e-157 yisR K Transcriptional regulator
PCDDNCKO_01087 4.1e-144 purR K helix_turn _helix lactose operon repressor
PCDDNCKO_01088 3.6e-156 yisS 1.1.1.370 S Oxidoreductase family, C-terminal alpha/beta domain
PCDDNCKO_01089 4e-84 yisT S DinB family
PCDDNCKO_01090 7e-70 mcbG S Pentapeptide repeats (9 copies)
PCDDNCKO_01091 1.1e-80 yjcF S Acetyltransferase (GNAT) domain
PCDDNCKO_01092 0.0 yitJ 1.5.1.20, 2.1.1.10, 2.1.1.13 E Catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
PCDDNCKO_01093 1.8e-52 yajQ S Belongs to the UPF0234 family
PCDDNCKO_01094 1.8e-161 cvfB S protein conserved in bacteria
PCDDNCKO_01095 9e-173 yufN S ABC transporter substrate-binding protein PnrA-like
PCDDNCKO_01096 7.9e-230 yvaQ NT Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
PCDDNCKO_01097 2.4e-242 cypC 1.11.2.4, 1.14.14.1 Q Cytochrome P450
PCDDNCKO_01099 5.5e-158 yitS S protein conserved in bacteria
PCDDNCKO_01100 6.6e-148 yitT S Uncharacterized protein conserved in bacteria (DUF2179)
PCDDNCKO_01101 2.9e-81 ipi S Intracellular proteinase inhibitor
PCDDNCKO_01102 4.4e-26 S Protein of unknown function (DUF3813)
PCDDNCKO_01103 3.5e-07
PCDDNCKO_01104 2.5e-152 yitU 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
PCDDNCKO_01105 1.5e-143 yjfP S COG1073 Hydrolases of the alpha beta superfamily
PCDDNCKO_01106 4.7e-51 yitW S metal-sulfur cluster biosynthetic enzyme
PCDDNCKO_01107 2.4e-80 fosB 2.5.1.18 H Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor
PCDDNCKO_01108 1.6e-272 yitY C D-arabinono-1,4-lactone oxidase
PCDDNCKO_01109 1.2e-89 norB G Major Facilitator Superfamily
PCDDNCKO_01110 8.6e-198 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PCDDNCKO_01111 3.9e-226 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PCDDNCKO_01112 3.5e-135 argB 2.7.2.8 F Belongs to the acetylglutamate kinase family. ArgB subfamily
PCDDNCKO_01113 1.3e-218 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
PCDDNCKO_01114 6.3e-204 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PCDDNCKO_01115 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase ammonia chain
PCDDNCKO_01116 2.7e-177 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PCDDNCKO_01117 1.2e-27 yjzC S YjzC-like protein
PCDDNCKO_01118 1.5e-23 yjzD S Protein of unknown function (DUF2929)
PCDDNCKO_01119 1.3e-139 yjaU I carboxylic ester hydrolase activity
PCDDNCKO_01120 2e-103 yjaV
PCDDNCKO_01121 1.9e-166 med S Transcriptional activator protein med
PCDDNCKO_01122 2.5e-26 comZ S ComZ
PCDDNCKO_01123 5.9e-32 yjzB
PCDDNCKO_01124 1.1e-172 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PCDDNCKO_01125 4.4e-233 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PCDDNCKO_01126 1.6e-148 yjaZ O Zn-dependent protease
PCDDNCKO_01127 9.7e-183 appD P Belongs to the ABC transporter superfamily
PCDDNCKO_01128 2.2e-187 appF E Belongs to the ABC transporter superfamily
PCDDNCKO_01129 8.9e-250 appA E COG0747 ABC-type dipeptide transport system, periplasmic component
PCDDNCKO_01130 7e-170 oppB P COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PCDDNCKO_01131 3.6e-155 appC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PCDDNCKO_01132 5.5e-146 yjbA S Belongs to the UPF0736 family
PCDDNCKO_01133 1.4e-184 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
PCDDNCKO_01134 0.0 oppA E ABC transporter substrate-binding protein
PCDDNCKO_01135 2.7e-166 oppB P COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PCDDNCKO_01136 1.3e-165 oppC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PCDDNCKO_01137 2.7e-202 oppD P Belongs to the ABC transporter superfamily
PCDDNCKO_01138 3.3e-169 oppF E Belongs to the ABC transporter superfamily
PCDDNCKO_01139 1.8e-223 S Putative glycosyl hydrolase domain
PCDDNCKO_01140 2e-103 yjbC K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PCDDNCKO_01141 1.6e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PCDDNCKO_01142 5.6e-110 yjbE P Integral membrane protein TerC family
PCDDNCKO_01143 2e-116 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
PCDDNCKO_01144 1.9e-217 yjbF S Competence protein
PCDDNCKO_01145 0.0 pepF E oligoendopeptidase F
PCDDNCKO_01146 5.8e-19
PCDDNCKO_01147 2.3e-170 yjbH Q dithiol-disulfide isomerase involved in polyketide biosynthesis
PCDDNCKO_01148 4.1e-71 yjbI S Bacterial-like globin
PCDDNCKO_01149 4.6e-115 yjbJ M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
PCDDNCKO_01150 2.7e-100 yjbK S protein conserved in bacteria
PCDDNCKO_01151 1.6e-61 yjbL S Belongs to the UPF0738 family
PCDDNCKO_01152 1.1e-107 yjbM 2.7.6.5 S GTP pyrophosphokinase
PCDDNCKO_01153 2.1e-151 nadK 2.7.1.23 G Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PCDDNCKO_01154 1.5e-161 yjbO 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PCDDNCKO_01155 9.7e-143 prpE 3.1.3.16, 3.6.1.41 T Asymmetrically hydrolyzes Ap4p to yield AMP and ATP
PCDDNCKO_01156 0.0 yjbQ P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PCDDNCKO_01157 5.2e-138 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PCDDNCKO_01158 7.1e-107 tenI 2.5.1.3, 5.3.99.10 H Transcriptional regulator TenI
PCDDNCKO_01159 4.5e-213 thiO 1.4.3.19 E Glycine oxidase
PCDDNCKO_01160 1.4e-30 thiS H Thiamine biosynthesis
PCDDNCKO_01161 3.4e-135 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PCDDNCKO_01162 1.8e-187 thiF 2.7.7.73, 2.7.7.80 H COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
PCDDNCKO_01163 1.1e-147 thiD 2.5.1.3, 2.7.1.35, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PCDDNCKO_01164 4e-139 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
PCDDNCKO_01165 1.4e-86 yjbX S Spore coat protein
PCDDNCKO_01166 6.7e-83 cotZ S Spore coat protein
PCDDNCKO_01167 4.6e-93 cotY S Spore coat protein Z
PCDDNCKO_01168 5.1e-71 cotX S Spore Coat Protein X and V domain
PCDDNCKO_01169 1e-21 cotW
PCDDNCKO_01170 1.4e-39 cotV S Spore Coat Protein X and V domain
PCDDNCKO_01171 7.3e-56 yjcA S Protein of unknown function (DUF1360)
PCDDNCKO_01175 3.8e-38 spoVIF S Stage VI sporulation protein F
PCDDNCKO_01176 0.0 yjcD 3.6.4.12 L DNA helicase
PCDDNCKO_01177 6.7e-35
PCDDNCKO_01178 1.2e-140 blm 3.5.2.6 S Belongs to the metallo-beta-lactamase superfamily. Class-B beta-lactamase family
PCDDNCKO_01179 1.2e-124 S ABC-2 type transporter
PCDDNCKO_01180 2.9e-131 nodI V AAA domain, putative AbiEii toxin, Type IV TA system
PCDDNCKO_01181 9.4e-36 K SpoVT / AbrB like domain
PCDDNCKO_01182 2.5e-74 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PCDDNCKO_01183 3.2e-92 yjcG J Belongs to the 2H phosphoesterase superfamily. YjcG family
PCDDNCKO_01184 7.2e-127 yjcH P COG2382 Enterochelin esterase and related enzymes
PCDDNCKO_01185 3.3e-211 metB 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PCDDNCKO_01186 2.4e-212 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PCDDNCKO_01188 6e-191 L Belongs to the 'phage' integrase family
PCDDNCKO_01189 8.1e-102 S Helix-turn-helix domain
PCDDNCKO_01190 4.6e-93 L Belongs to the 'phage' integrase family
PCDDNCKO_01193 8.7e-13 S Cro/C1-type HTH DNA-binding domain
PCDDNCKO_01194 4.2e-24
PCDDNCKO_01198 1e-14
PCDDNCKO_01202 1.1e-87
PCDDNCKO_01203 8.3e-18
PCDDNCKO_01208 2.9e-11
PCDDNCKO_01210 1.1e-159 D phage tail tape measure protein
PCDDNCKO_01212 1e-35 2.7.1.176 S Zeta toxin
PCDDNCKO_01215 1.5e-21
PCDDNCKO_01216 1.3e-21
PCDDNCKO_01217 7.8e-38
PCDDNCKO_01218 2.9e-29
PCDDNCKO_01219 4.7e-204 M nucleic acid phosphodiester bond hydrolysis
PCDDNCKO_01221 2e-84 yqjL S Alpha beta hydrolase
PCDDNCKO_01222 2.8e-49 FG Scavenger mRNA decapping enzyme C-term binding
PCDDNCKO_01223 6.7e-73 XK27_05370 5.3.1.24 E phosphoribosylanthranilate isomerase activity
PCDDNCKO_01225 8.5e-58 E Glyoxalase-like domain
PCDDNCKO_01226 5.2e-146 bla 3.5.2.6 V beta-lactamase
PCDDNCKO_01227 1.2e-45 yjcS S Antibiotic biosynthesis monooxygenase
PCDDNCKO_01228 3.8e-100 yfjF EGP Belongs to the major facilitator superfamily
PCDDNCKO_01229 2e-114 yfjF EGP Belongs to the major facilitator superfamily
PCDDNCKO_01230 1.4e-81 napB K helix_turn_helix multiple antibiotic resistance protein
PCDDNCKO_01231 3.8e-220 ganA 3.2.1.89 G arabinogalactan
PCDDNCKO_01232 4.8e-290 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PCDDNCKO_01233 8.5e-187 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PCDDNCKO_01234 6.7e-215 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PCDDNCKO_01235 1e-309 lacE 2.7.1.196, 2.7.1.205, 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PCDDNCKO_01236 1.5e-49 lacF 2.7.1.207 G phosphotransferase system
PCDDNCKO_01237 1.1e-283 lacG 3.2.1.85 G Belongs to the glycosyl hydrolase 1 family
PCDDNCKO_01238 5.7e-138 lacR K COG1349 Transcriptional regulators of sugar metabolism
PCDDNCKO_01239 9.2e-124 5.4.2.6 S Haloacid dehalogenase-like hydrolase
PCDDNCKO_01240 2.6e-34
PCDDNCKO_01241 4.2e-50 K helix_turn_helix multiple antibiotic resistance protein
PCDDNCKO_01242 8.1e-106 yhiD S MgtC SapB transporter
PCDDNCKO_01244 2.9e-21 yjfB S Putative motility protein
PCDDNCKO_01245 8e-67 T PhoQ Sensor
PCDDNCKO_01246 9.2e-101 yjgB S Domain of unknown function (DUF4309)
PCDDNCKO_01247 0.0 yjgC 1.17.1.10, 1.17.1.9 C formate dehydrogenase, alpha subunit
PCDDNCKO_01248 4.3e-92 yjgD S Protein of unknown function (DUF1641)
PCDDNCKO_01249 1.1e-225 yjiB 1.14.13.154, 1.14.15.8 C Cytochrome P450
PCDDNCKO_01250 3.4e-222 oleD GT1 CG COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
PCDDNCKO_01251 6.8e-29
PCDDNCKO_01252 2.1e-143 hemD 2.1.1.107, 4.2.1.75 H Uroporphyrinogen-III synthase
PCDDNCKO_01253 7.9e-124 ybbM S transport system, permease component
PCDDNCKO_01254 4.2e-130 pstB 3.6.3.27 P Belongs to the ABC transporter superfamily
PCDDNCKO_01255 3e-176 yjlA EG Putative multidrug resistance efflux transporter
PCDDNCKO_01256 1.5e-91 yjlB S Cupin domain
PCDDNCKO_01257 7e-66 yjlC S Protein of unknown function (DUF1641)
PCDDNCKO_01258 1.3e-218 yjlD 1.6.99.3 C NADH dehydrogenase
PCDDNCKO_01259 3.3e-277 uxaC 5.3.1.12 G glucuronate isomerase
PCDDNCKO_01260 3.9e-254 yjmB G symporter YjmB
PCDDNCKO_01261 1.7e-182 exuR K transcriptional
PCDDNCKO_01262 5.1e-281 uxaB 1.1.1.17, 1.1.1.58 G tagaturonate reductase activity
PCDDNCKO_01263 4.9e-287 uxaA 4.2.1.7, 4.4.1.24 G Altronate
PCDDNCKO_01264 3.9e-131 MA20_18170 S membrane transporter protein
PCDDNCKO_01265 3.1e-78 yjoA S DinB family
PCDDNCKO_01266 4.9e-215 S response regulator aspartate phosphatase
PCDDNCKO_01268 3.2e-167 xlyA 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
PCDDNCKO_01269 1e-60 yjqA S Bacterial PH domain
PCDDNCKO_01270 9.7e-109 yjqB S phage-related replication protein
PCDDNCKO_01271 1.1e-147 ydbD P Catalase
PCDDNCKO_01272 3.8e-110 xkdA E IrrE N-terminal-like domain
PCDDNCKO_01273 1.1e-56 xre K Helix-turn-helix XRE-family like proteins
PCDDNCKO_01275 1.6e-151 xkdC L Bacterial dnaA protein
PCDDNCKO_01278 2.7e-10 yqaO S Phage-like element PBSX protein XtrA
PCDDNCKO_01279 4.9e-85 xpf K COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
PCDDNCKO_01280 6.1e-111 xtmA L phage terminase small subunit
PCDDNCKO_01281 2.3e-208 xtmB S phage terminase, large subunit
PCDDNCKO_01282 5.1e-241 yqbA S portal protein
PCDDNCKO_01283 1.7e-90 xkdF 2.1.1.72 L Putative phage serine protease XkdF
PCDDNCKO_01284 1e-157 xkdG S Phage capsid family
PCDDNCKO_01285 7.4e-46 yqbG S Protein of unknown function (DUF3199)
PCDDNCKO_01286 4.6e-42 yqbH S Domain of unknown function (DUF3599)
PCDDNCKO_01287 9.1e-60 xkdI S Bacteriophage HK97-gp10, putative tail-component
PCDDNCKO_01288 4.9e-57 xkdJ
PCDDNCKO_01289 3.1e-14
PCDDNCKO_01290 1e-225 xkdK S Phage tail sheath C-terminal domain
PCDDNCKO_01291 2e-74 xkdM S Phage tail tube protein
PCDDNCKO_01292 1.7e-73 S Phage XkdN-like tail assembly chaperone protein, TAC
PCDDNCKO_01293 3.4e-19
PCDDNCKO_01294 1.4e-189 xkdO L Transglycosylase SLT domain
PCDDNCKO_01295 6.6e-111 xkdP S Lysin motif
PCDDNCKO_01296 1.4e-160 xkdQ 3.2.1.96 G NLP P60 protein
PCDDNCKO_01297 1.2e-31 xkdR S Protein of unknown function (DUF2577)
PCDDNCKO_01298 7.2e-58 xkdS S Protein of unknown function (DUF2634)
PCDDNCKO_01299 1.1e-165 xkdT S Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
PCDDNCKO_01300 1.9e-85 xkdU S Uncharacterised protein conserved in bacteria (DUF2313)
PCDDNCKO_01301 1.6e-26
PCDDNCKO_01302 1.1e-90
PCDDNCKO_01305 6.5e-30 xkdX
PCDDNCKO_01306 1.6e-137 xepA
PCDDNCKO_01307 1.9e-37 xhlA S Haemolysin XhlA
PCDDNCKO_01308 1.3e-38 xhlB S SPP1 phage holin
PCDDNCKO_01309 6.4e-170 xlyA 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
PCDDNCKO_01310 8.7e-23 spoIISB S Stage II sporulation protein SB
PCDDNCKO_01311 1.4e-133 spoIISA S Toxin SpoIISA, type II toxin-antitoxin system
PCDDNCKO_01312 5.8e-175 pit P phosphate transporter
PCDDNCKO_01313 6.9e-110 ykaA P COG1392 Phosphate transport regulator (distant homolog of PhoU)
PCDDNCKO_01314 1.5e-242 steT E amino acid
PCDDNCKO_01315 4.8e-179 mhqA E COG0346 Lactoylglutathione lyase and related lyases
PCDDNCKO_01316 3.5e-302 ykcB M COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PCDDNCKO_01317 1.2e-177 ykcC GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
PCDDNCKO_01319 2.6e-202 htrA 3.4.21.107 O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PCDDNCKO_01320 3.4e-283 yubD P Major Facilitator Superfamily
PCDDNCKO_01322 6.5e-156 dppA E D-aminopeptidase
PCDDNCKO_01323 1.4e-159 dppB P COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PCDDNCKO_01324 7.2e-175 dppC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PCDDNCKO_01325 2e-191 dppD P Belongs to the ABC transporter superfamily
PCDDNCKO_01326 0.0 dppE E ABC transporter substrate-binding protein
PCDDNCKO_01327 1.6e-174 ykfA 3.4.17.13 V proteins, homologs of microcin C7 resistance protein MccF
PCDDNCKO_01328 1e-196 ykfB 5.1.1.20 M Belongs to the mandelate racemase muconate lactonizing enzyme family
PCDDNCKO_01329 5e-170 ykfC 3.4.14.13 M COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
PCDDNCKO_01330 9.6e-183 ykfD E Belongs to the ABC transporter superfamily
PCDDNCKO_01331 5.1e-206 pgl 3.1.1.31 G 6-phosphogluconolactonase
PCDDNCKO_01332 7.2e-158 ykgA E Amidinotransferase
PCDDNCKO_01333 1.4e-92 ykhA 3.1.2.20 I Acyl-CoA hydrolase
PCDDNCKO_01334 7.4e-100 ykkB 2.3.1.128 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PCDDNCKO_01335 1.6e-52 ykkC P Multidrug resistance protein
PCDDNCKO_01336 3.4e-49 ykkD P Multidrug resistance protein
PCDDNCKO_01337 6.6e-170 purU 2.7.7.72, 3.5.1.10 F Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4)
PCDDNCKO_01338 3.3e-203 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PCDDNCKO_01339 8.1e-227 proA 1.2.1.41, 1.2.1.81 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PCDDNCKO_01340 1.3e-70 ohrA O Organic hydroperoxide resistance protein
PCDDNCKO_01341 1.5e-86 ohrR K COG1846 Transcriptional regulators
PCDDNCKO_01342 4.2e-71 ohrB O Organic hydroperoxide resistance protein
PCDDNCKO_01343 1.1e-56 D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
PCDDNCKO_01345 8.4e-215 M Glycosyl transferase family 2
PCDDNCKO_01346 9.7e-119 3.2.1.4 GH5,GH9 K Collagen triple helix repeat
PCDDNCKO_01347 5.5e-217 hcaT 1.5.1.2 EGP Major facilitator Superfamily
PCDDNCKO_01348 2.5e-121 yeiL T COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
PCDDNCKO_01349 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PCDDNCKO_01350 1.1e-175 isp O Belongs to the peptidase S8 family
PCDDNCKO_01351 4.7e-146 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PCDDNCKO_01352 1.2e-132 ykoC P Cobalt transport protein
PCDDNCKO_01353 3.4e-305 P ABC transporter, ATP-binding protein
PCDDNCKO_01354 8.4e-97 ykoE S ABC-type cobalt transport system, permease component
PCDDNCKO_01355 1e-245 ydhD M Glycosyl hydrolase
PCDDNCKO_01357 2.2e-238 mgtE P Acts as a magnesium transporter
PCDDNCKO_01358 5.4e-53 tnrA K transcriptional
PCDDNCKO_01359 1.9e-16
PCDDNCKO_01360 3.1e-26 ykoL
PCDDNCKO_01361 1.1e-80 ykoM K transcriptional
PCDDNCKO_01362 2.2e-99 ykoP G polysaccharide deacetylase
PCDDNCKO_01363 0.0 ligD 6.5.1.1 L ATP-dependent DNA ligase
PCDDNCKO_01364 1.4e-153 ku L With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
PCDDNCKO_01365 1e-99 ykoX S membrane-associated protein
PCDDNCKO_01366 2.1e-135 ykoY P COG0861 Membrane protein TerC, possibly involved in tellurium resistance
PCDDNCKO_01367 3.4e-127 sigI K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PCDDNCKO_01368 6.9e-119 rsgI S Anti-sigma factor N-terminus
PCDDNCKO_01369 2.5e-26 sspD S small acid-soluble spore protein
PCDDNCKO_01370 2.7e-126 ykrK S Domain of unknown function (DUF1836)
PCDDNCKO_01371 4.1e-156 htpX O Belongs to the peptidase M48B family
PCDDNCKO_01372 1.3e-241 ktrB P COG0168 Trk-type K transport systems, membrane components
PCDDNCKO_01373 4.3e-45 ydfR S Protein of unknown function (DUF421)
PCDDNCKO_01374 4.9e-54 ydfR S Protein of unknown function (DUF421)
PCDDNCKO_01375 7.9e-24 ykzE
PCDDNCKO_01376 3.6e-188 ykrP G COG3594 Fucose 4-O-acetylase and related acetyltransferases
PCDDNCKO_01377 0.0 kinE 2.7.13.3 T Histidine kinase
PCDDNCKO_01378 1.5e-86 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PCDDNCKO_01380 1.8e-195 mtnA 5.3.1.23 E Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
PCDDNCKO_01381 1e-226 mtnK 2.7.1.100 F Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
PCDDNCKO_01382 1.1e-149 mtnU 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
PCDDNCKO_01383 1.9e-228 mtnE 2.6.1.83 E Aminotransferase
PCDDNCKO_01384 1.1e-225 mtnW 5.3.2.5 G Catalyzes the enolization of 2,3-diketo-5- methylthiopentyl-1-phosphate (DK-MTP-1-P) into 2-hydroxy-3-keto-5- methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P)
PCDDNCKO_01385 1.2e-134 mtnX 3.1.3.87, 4.2.1.109 E Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
PCDDNCKO_01386 1.2e-114 mtnB 3.1.3.87, 4.1.2.17, 4.2.1.109, 5.1.3.4 E Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P)
PCDDNCKO_01387 6.4e-96 mtnD 1.13.11.53, 1.13.11.54 S Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
PCDDNCKO_01388 3.4e-10 S Spo0E like sporulation regulatory protein
PCDDNCKO_01389 2.1e-274 kinD 2.7.13.3 T COG0642 Signal transduction histidine kinase
PCDDNCKO_01390 5.5e-77 ykvE K transcriptional
PCDDNCKO_01391 4.6e-127 motB N Flagellar motor protein
PCDDNCKO_01392 1.1e-136 motA N flagellar motor
PCDDNCKO_01393 0.0 clpE O Belongs to the ClpA ClpB family
PCDDNCKO_01394 3e-182 ykvI S membrane
PCDDNCKO_01395 3.7e-186
PCDDNCKO_01396 1.5e-126 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
PCDDNCKO_01397 1.7e-78 queD 4.1.2.50, 4.2.3.12 H synthase
PCDDNCKO_01398 2.2e-139 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
PCDDNCKO_01399 8.5e-95 queF 1.7.1.13 S Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
PCDDNCKO_01400 3.4e-61 ykvN K Transcriptional regulator
PCDDNCKO_01401 2.9e-131 IQ Enoyl-(Acyl carrier protein) reductase
PCDDNCKO_01402 1.1e-32 queF 1.7.1.13 S Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
PCDDNCKO_01403 5.5e-43 ykvR S Protein of unknown function (DUF3219)
PCDDNCKO_01404 7.8e-25 ykvS S protein conserved in bacteria
PCDDNCKO_01405 6e-28
PCDDNCKO_01406 2.4e-110 ykvT 3.5.1.28 M Cell Wall Hydrolase
PCDDNCKO_01407 1.1e-240 ykvU S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PCDDNCKO_01408 2.9e-87 stoA CO thiol-disulfide
PCDDNCKO_01409 0.0 cadA 3.6.3.3, 3.6.3.5 P COG2217 Cation transport ATPase
PCDDNCKO_01410 4.8e-207 pepQ 3.4.13.9 E COG0006 Xaa-Pro aminopeptidase
PCDDNCKO_01412 1.7e-176 ykvZ 5.1.1.1 K Transcriptional regulator
PCDDNCKO_01413 5.1e-156 glcT K antiterminator
PCDDNCKO_01414 0.0 ptsG 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PCDDNCKO_01415 2.1e-39 ptsH G phosphocarrier protein HPr
PCDDNCKO_01416 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PCDDNCKO_01417 6.1e-38 splA S Transcriptional regulator
PCDDNCKO_01418 1.9e-189 splB 4.1.99.14 L Spore photoproduct lyase
PCDDNCKO_01419 7.6e-262 mcpC NT chemotaxis protein
PCDDNCKO_01420 8.6e-159 glxR 1.1.1.31, 1.1.1.60 I COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
PCDDNCKO_01421 5.6e-117 ykwD J protein with SCP PR1 domains
PCDDNCKO_01422 0.0 mrdA 3.4.16.4 M Penicillin-binding Protein
PCDDNCKO_01423 1.2e-290 pilS 2.1.1.80, 2.7.13.3, 3.1.1.61 T Histidine kinase
PCDDNCKO_01424 3.9e-215 patA 2.6.1.1 E Aminotransferase
PCDDNCKO_01425 2.3e-09
PCDDNCKO_01426 2.6e-166 cheV 2.7.13.3 T Chemotaxis protein CheV
PCDDNCKO_01427 1.4e-83 ykyB S YkyB-like protein
PCDDNCKO_01428 8.7e-240 ykuC EGP Major facilitator Superfamily
PCDDNCKO_01429 1.2e-88 ykuD S protein conserved in bacteria
PCDDNCKO_01430 7e-153 ykuE S Metallophosphoesterase
PCDDNCKO_01431 1.3e-142 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PCDDNCKO_01433 1.7e-232 ykuI T Diguanylate phosphodiesterase
PCDDNCKO_01434 3.9e-37 ykuJ S protein conserved in bacteria
PCDDNCKO_01435 7.6e-94 ykuK S Ribonuclease H-like
PCDDNCKO_01436 2.1e-25 ykzF S Antirepressor AbbA
PCDDNCKO_01437 1e-75 ykuL S CBS domain
PCDDNCKO_01438 4.6e-168 ccpC K Transcriptional regulator
PCDDNCKO_01439 6.1e-90 fld C Flavodoxin
PCDDNCKO_01440 3.1e-172 ykuO
PCDDNCKO_01441 9.3e-80 fld C Flavodoxin
PCDDNCKO_01442 2.6e-76 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PCDDNCKO_01443 9.9e-216 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PCDDNCKO_01444 4.8e-38 ykuS S Belongs to the UPF0180 family
PCDDNCKO_01445 1.2e-138 ykuT M Mechanosensitive ion channel
PCDDNCKO_01446 8.8e-78 ykuV CO thiol-disulfide
PCDDNCKO_01447 4.5e-98 rok K Repressor of ComK
PCDDNCKO_01448 3.6e-161 yknT
PCDDNCKO_01449 2e-106 mobA 2.7.7.77 H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
PCDDNCKO_01450 6.5e-190 moeB 2.7.7.73, 2.7.7.80 H COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
PCDDNCKO_01451 8.4e-243 moeA 2.10.1.1 H molybdopterin
PCDDNCKO_01452 5.8e-94 mobB 2.10.1.1, 2.7.7.77 H molybdopterin-guanine dinucleotide biosynthesis protein
PCDDNCKO_01453 7.1e-83 moaE 2.8.1.12 H COG0314 Molybdopterin converting factor, large subunit
PCDDNCKO_01454 5.7e-33 moaD 2.8.1.12 H Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
PCDDNCKO_01455 3.2e-103 yknW S Yip1 domain
PCDDNCKO_01456 8.9e-172 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PCDDNCKO_01457 3e-122 macB V ABC transporter, ATP-binding protein
PCDDNCKO_01458 3.9e-210 yknZ V ABC transporter (permease)
PCDDNCKO_01459 4.6e-132 fruR K Transcriptional regulator
PCDDNCKO_01460 1.8e-167 fruK 2.7.1.11, 2.7.1.56 G Belongs to the carbohydrate kinase PfkB family
PCDDNCKO_01461 0.0 fruA 2.7.1.202 GT COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type)
PCDDNCKO_01462 7.4e-106 sipT 3.4.21.89 U Belongs to the peptidase S26 family
PCDDNCKO_01463 1.3e-36 ykoA
PCDDNCKO_01464 2.2e-309 ybiT S COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PCDDNCKO_01465 3.3e-169 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PCDDNCKO_01466 1.3e-237 ampS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
PCDDNCKO_01467 5.5e-12 S Uncharacterized protein YkpC
PCDDNCKO_01468 2.6e-183 mreB D Rod-share determining protein MreBH
PCDDNCKO_01469 1.8e-44 abrB K of stationary sporulation gene expression
PCDDNCKO_01470 6.3e-246 kinC 2.7.13.3 T COG0642 Signal transduction histidine kinase
PCDDNCKO_01471 2.6e-149 ykqA P Gamma-glutamyl cyclotransferase, AIG2-like
PCDDNCKO_01472 2e-115 ktrA P COG0569 K transport systems, NAD-binding component
PCDDNCKO_01473 0.0 ade 3.5.4.2 F Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PCDDNCKO_01474 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PCDDNCKO_01475 8.2e-31 ykzG S Belongs to the UPF0356 family
PCDDNCKO_01476 1.4e-145 ykrA S hydrolases of the HAD superfamily
PCDDNCKO_01477 1.2e-100 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PCDDNCKO_01479 2.9e-103 recN L Putative cell-wall binding lipoprotein
PCDDNCKO_01480 0.0 fabD 1.13.12.16, 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
PCDDNCKO_01481 0.0 Q Polyketide synthase of type I
PCDDNCKO_01482 0.0 Q polyketide synthase
PCDDNCKO_01483 0.0 Q Polyketide synthase of type I
PCDDNCKO_01484 0.0 Q Polyketide synthase of type I
PCDDNCKO_01485 0.0 Q Polyketide synthase of type I
PCDDNCKO_01486 0.0 Q Polyketide synthase of type I
PCDDNCKO_01487 0.0 bioH 2.1.1.197, 3.1.1.85, 4.2.99.20 IQ Phosphopantetheine attachment site
PCDDNCKO_01488 2.7e-210 V Beta-lactamase
PCDDNCKO_01489 2.7e-205 pdhA 1.2.4.1, 1.2.4.4 C COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PCDDNCKO_01490 1.4e-178 pdhB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PCDDNCKO_01491 2.9e-230 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PCDDNCKO_01492 5e-241 lpdA 1.8.1.4 C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PCDDNCKO_01493 1e-44 slp CO COG0526, thiol-disulfide isomerase and thioredoxins
PCDDNCKO_01494 2.7e-138 pdaA_2 3.5.1.104 G Polysaccharide deacetylase
PCDDNCKO_01495 5e-276 speA 4.1.1.19 E Arginine
PCDDNCKO_01496 1.6e-42 yktA S Belongs to the UPF0223 family
PCDDNCKO_01497 4.9e-119 yktB S Belongs to the UPF0637 family
PCDDNCKO_01498 6.3e-24 ykzI
PCDDNCKO_01499 2.3e-150 suhB 3.1.3.25 G Inositol monophosphatase
PCDDNCKO_01500 1.5e-82 ykzC S Acetyltransferase (GNAT) family
PCDDNCKO_01501 1.9e-294 mpl 3.4.24.28, 3.4.24.29 E Peptidase M4
PCDDNCKO_01502 2.1e-189 ylaA
PCDDNCKO_01503 1.1e-43 ylaB
PCDDNCKO_01504 5.5e-92 ylaC K Belongs to the sigma-70 factor family. ECF subfamily
PCDDNCKO_01505 2.8e-13 sigC S Putative zinc-finger
PCDDNCKO_01506 5.7e-40 ylaE
PCDDNCKO_01507 6.7e-24 S Family of unknown function (DUF5325)
PCDDNCKO_01508 0.0 typA T GTP-binding protein TypA
PCDDNCKO_01509 1.3e-48 ylaH S YlaH-like protein
PCDDNCKO_01510 1e-33 ylaI S protein conserved in bacteria
PCDDNCKO_01511 6.7e-105 ylaJ S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PCDDNCKO_01512 3.2e-245 phoH T ATPase related to phosphate starvation-inducible protein PhoH
PCDDNCKO_01513 2.2e-84 ylaL S Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
PCDDNCKO_01514 2.1e-171 glsA 3.5.1.2 E Belongs to the glutaminase family
PCDDNCKO_01515 8.7e-44 ylaN S Belongs to the UPF0358 family
PCDDNCKO_01516 9.4e-212 ftsW D Belongs to the SEDS family
PCDDNCKO_01517 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PCDDNCKO_01518 1.9e-164 ctaA 2.5.1.141 O Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group
PCDDNCKO_01519 3.2e-164 ctaB 2.5.1.141 O Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
PCDDNCKO_01520 1.8e-190 ctaC 1.9.3.1 C Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)
PCDDNCKO_01521 0.0 ctaD 1.10.3.12, 1.9.3.1 C Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
PCDDNCKO_01522 2.4e-110 cyoC 1.10.3.12, 1.9.3.1 C COG1845 Heme copper-type cytochrome quinol oxidase, subunit 3
PCDDNCKO_01523 2.7e-52 ctaF 1.10.3.12, 1.9.3.1 C COG3125 Heme copper-type cytochrome quinol oxidase, subunit 4
PCDDNCKO_01524 6.3e-165 ctaG S cytochrome c oxidase
PCDDNCKO_01525 8.5e-60 ylbA S YugN-like family
PCDDNCKO_01526 1.4e-72 ylbB T COG0517 FOG CBS domain
PCDDNCKO_01527 1.7e-198 ylbC S protein with SCP PR1 domains
PCDDNCKO_01528 6.5e-56 ylbD S Putative coat protein
PCDDNCKO_01529 8.8e-37 ylbE S YlbE-like protein
PCDDNCKO_01530 1.2e-71 ylbF S Belongs to the UPF0342 family
PCDDNCKO_01531 7.2e-43 ylbG S UPF0298 protein
PCDDNCKO_01532 4.2e-89 rsmD 2.1.1.171 L Methyltransferase
PCDDNCKO_01533 7.3e-83 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PCDDNCKO_01534 5.7e-217 ylbJ S Sporulation integral membrane protein YlbJ
PCDDNCKO_01535 2e-138 ylbK S esterase of the alpha-beta hydrolase superfamily
PCDDNCKO_01536 5.5e-189 ylbL T Belongs to the peptidase S16 family
PCDDNCKO_01537 2.3e-229 ylbM S Belongs to the UPF0348 family
PCDDNCKO_01538 3.3e-89 yceD S metal-binding, possibly nucleic acid-binding protein
PCDDNCKO_01539 1.2e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PCDDNCKO_01540 7.6e-71 ylbO S SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
PCDDNCKO_01541 3.1e-89 ylbP K n-acetyltransferase
PCDDNCKO_01542 6.7e-162 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PCDDNCKO_01543 1.5e-308 bshC S Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
PCDDNCKO_01544 1.2e-77 mraZ K Belongs to the MraZ family
PCDDNCKO_01545 2.5e-172 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PCDDNCKO_01546 1.1e-51 ftsL D Essential cell division protein
PCDDNCKO_01547 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PCDDNCKO_01548 0.0 ftsI 3.4.16.4 M stage V sporulation protein D
PCDDNCKO_01549 7.5e-280 murE 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PCDDNCKO_01550 1.7e-171 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PCDDNCKO_01551 5.9e-255 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PCDDNCKO_01552 2.2e-185 spoVE D Belongs to the SEDS family
PCDDNCKO_01553 3e-201 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PCDDNCKO_01554 3.7e-168 murB 1.3.1.98 M cell wall formation
PCDDNCKO_01555 3e-134 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PCDDNCKO_01556 2e-228 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PCDDNCKO_01557 5.8e-203 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PCDDNCKO_01558 0.0 bpr O COG1404 Subtilisin-like serine proteases
PCDDNCKO_01559 8.9e-162 spoIIGA M aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR
PCDDNCKO_01560 6.8e-117 sigE K sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PCDDNCKO_01561 1.1e-139 sigG K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PCDDNCKO_01562 1.3e-142 modF 3.6.3.21, 3.6.3.34 P COG1119 ABC-type molybdenum transport system, ATPase component photorepair protein PhrA
PCDDNCKO_01563 1.6e-254 argE 3.5.1.16 E Acetylornithine deacetylase
PCDDNCKO_01564 2.2e-38 ylmC S sporulation protein
PCDDNCKO_01565 7.5e-160 yfiH S Belongs to the multicopper oxidase YfiH RL5 family
PCDDNCKO_01566 3e-122 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PCDDNCKO_01567 1.5e-61 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PCDDNCKO_01568 5.2e-41 yggT S membrane
PCDDNCKO_01569 5.5e-141 ylmH 5.4.99.23, 5.4.99.24 S conserved protein, contains S4-like domain
PCDDNCKO_01570 8.9e-68 divIVA D Cell division initiation protein
PCDDNCKO_01571 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PCDDNCKO_01572 3.8e-63 dksA T COG1734 DnaK suppressor protein
PCDDNCKO_01573 2.6e-77 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PCDDNCKO_01574 2.5e-161 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PCDDNCKO_01575 1e-93 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PCDDNCKO_01576 8e-233 pyrP F Xanthine uracil
PCDDNCKO_01577 9e-167 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PCDDNCKO_01578 2.3e-248 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PCDDNCKO_01579 7.2e-211 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PCDDNCKO_01580 0.0 carB 6.3.5.5 F Belongs to the CarB family
PCDDNCKO_01581 2.9e-142 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
PCDDNCKO_01582 1.7e-173 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PCDDNCKO_01583 1.2e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PCDDNCKO_01584 7.3e-115 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PCDDNCKO_01586 3.8e-141 cysH 1.8.4.10, 1.8.4.8, 2.7.1.25 EH Belongs to the PAPS reductase family. CysH subfamily
PCDDNCKO_01587 1.8e-179 cysP P phosphate transporter
PCDDNCKO_01588 3.8e-223 sat 2.7.7.4 P Belongs to the sulfate adenylyltransferase family
PCDDNCKO_01589 1.1e-109 cysC 2.7.1.25 P Catalyzes the synthesis of activated sulfate
PCDDNCKO_01590 4.1e-144 hemD 2.1.1.107, 4.2.1.75 H Belongs to the precorrin methyltransferase family
PCDDNCKO_01591 2.9e-145 cbiX 4.99.1.3, 4.99.1.4, 5.4.99.60, 5.4.99.61 S Sirohydrochlorin ferrochelatase
PCDDNCKO_01592 7.6e-80 cysG 1.3.1.76, 4.99.1.4 H Siroheme synthase
PCDDNCKO_01593 0.0 FbpA K RNA-binding protein homologous to eukaryotic snRNP
PCDDNCKO_01594 0.0 yloB 3.6.3.8 P COG0474 Cation transport ATPase
PCDDNCKO_01595 1e-154 yloC S stress-induced protein
PCDDNCKO_01596 1.5e-40 ylzA S Belongs to the UPF0296 family
PCDDNCKO_01597 8.1e-111 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
PCDDNCKO_01598 2.8e-28 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PCDDNCKO_01599 5.7e-225 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PCDDNCKO_01600 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PCDDNCKO_01601 2.3e-84 def 2.1.2.9, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PCDDNCKO_01602 2.5e-172 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PCDDNCKO_01603 7.9e-252 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PCDDNCKO_01604 2.6e-205 rlmN 2.1.1.192, 2.1.1.224 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PCDDNCKO_01605 5.6e-138 stp 3.1.3.16 T phosphatase
PCDDNCKO_01606 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
PCDDNCKO_01607 8.2e-165 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PCDDNCKO_01608 2.3e-116 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PCDDNCKO_01609 5.8e-120 thiN 2.7.6.2 H thiamine pyrophosphokinase
PCDDNCKO_01610 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PCDDNCKO_01611 5.5e-59 asp S protein conserved in bacteria
PCDDNCKO_01612 3.8e-304 yloV S kinase related to dihydroxyacetone kinase
PCDDNCKO_01613 2.1e-117 sdaAB 4.3.1.17 E L-serine dehydratase
PCDDNCKO_01614 4.6e-155 sdaAA 4.3.1.17 E L-serine dehydratase
PCDDNCKO_01615 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PCDDNCKO_01616 2e-92 fapR K Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism
PCDDNCKO_01617 6.2e-177 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PCDDNCKO_01618 7.7e-169 fabD 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
PCDDNCKO_01619 4.6e-129 IQ reductase
PCDDNCKO_01620 2.8e-32 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PCDDNCKO_01621 4.4e-135 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PCDDNCKO_01622 0.0 smc D Required for chromosome condensation and partitioning
PCDDNCKO_01623 2.8e-174 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PCDDNCKO_01624 1e-139 S Phosphotransferase enzyme family
PCDDNCKO_01625 4.3e-50 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PCDDNCKO_01626 1.8e-232 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PCDDNCKO_01627 1.4e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PCDDNCKO_01628 1.7e-35 ylqC S Belongs to the UPF0109 family
PCDDNCKO_01629 1.3e-61 ylqD S YlqD protein
PCDDNCKO_01630 2e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PCDDNCKO_01631 1.6e-137 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PCDDNCKO_01632 1.9e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PCDDNCKO_01633 6.4e-159 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PCDDNCKO_01634 4.5e-127 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PCDDNCKO_01635 1.7e-304 ylqG
PCDDNCKO_01636 8.7e-44 ylqH S homolog of the cytoplasmic domain of flagellar protein FhlB
PCDDNCKO_01637 6.8e-212 sucC 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PCDDNCKO_01638 1.1e-167 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PCDDNCKO_01639 1.6e-168 dprA LU Rossmann fold nucleotide-binding protein involved in DNA uptake
PCDDNCKO_01640 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PCDDNCKO_01641 9.7e-247 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PCDDNCKO_01642 7.2e-172 xerC L tyrosine recombinase XerC
PCDDNCKO_01643 2e-92 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PCDDNCKO_01644 4.5e-234 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PCDDNCKO_01645 1.2e-135 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
PCDDNCKO_01646 3e-55 flgB N Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body
PCDDNCKO_01647 2.4e-75 flgC N Belongs to the flagella basal body rod proteins family
PCDDNCKO_01648 9.6e-31 fliE N Flagellar hook-basal body
PCDDNCKO_01649 1.4e-263 fliF N The M ring may be actively involved in energy transduction
PCDDNCKO_01650 1.3e-177 fliG N One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
PCDDNCKO_01651 1.1e-88 fliH NU COG1317 Flagellar biosynthesis type III secretory pathway protein
PCDDNCKO_01652 1.9e-242 fliI 3.6.3.14 NU COG1157 Flagellar biosynthesis type III secretory pathway ATPase
PCDDNCKO_01653 4.5e-71 fliJ N Flagellar biosynthesis chaperone
PCDDNCKO_01654 1.3e-47 ylxF S MgtE intracellular N domain
PCDDNCKO_01655 1.8e-203 fliK N Flagellar hook-length control protein
PCDDNCKO_01656 5.3e-72 flgD N Flagellar basal body rod modification protein
PCDDNCKO_01657 4e-139 flgG N Flagellar basal body rod
PCDDNCKO_01658 7.8e-57 fliL N Controls the rotational direction of flagella during chemotaxis
PCDDNCKO_01659 5.4e-181 fliM N One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
PCDDNCKO_01660 4e-188 fliN N FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
PCDDNCKO_01661 1.2e-58 cheB 3.1.1.61, 3.5.1.44 T response regulator
PCDDNCKO_01662 1.3e-111 fliZ N Flagellar biosynthesis protein, FliO
PCDDNCKO_01663 1.6e-109 fliP N Plays a role in the flagellum-specific transport system
PCDDNCKO_01664 2e-37 fliQ N Role in flagellar biosynthesis
PCDDNCKO_01665 7.5e-130 fliR N Flagellar biosynthetic protein FliR
PCDDNCKO_01666 5.3e-190 flhB N Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PCDDNCKO_01667 0.0 flhA N Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PCDDNCKO_01668 8.8e-193 flhF N Flagellar biosynthesis regulator FlhF
PCDDNCKO_01669 4.5e-155 flhG D Belongs to the ParA family
PCDDNCKO_01670 5e-193 cheB 3.1.1.61, 3.5.1.44 NT catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
PCDDNCKO_01671 0.0 cheA 2.7.13.3 NT COG0643 Chemotaxis protein histidine kinase and related kinases
PCDDNCKO_01672 8.8e-81 cheW NT COG0835 Chemotaxis signal transduction protein
PCDDNCKO_01673 3.7e-111 cheC NT COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation
PCDDNCKO_01674 5.1e-87 cheD 3.5.1.44 NT Deamidates glutamine residues to glutamate on methyl- accepting chemotaxis receptors (MCPs). CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the CheA kinase
PCDDNCKO_01675 3.9e-139 sigD K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PCDDNCKO_01676 8.1e-55 ylxL
PCDDNCKO_01677 3.8e-131 rpsB J Belongs to the universal ribosomal protein uS2 family
PCDDNCKO_01678 5.3e-156 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PCDDNCKO_01679 9.4e-127 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PCDDNCKO_01680 1.9e-90 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PCDDNCKO_01681 2.9e-145 uppS 2.5.1.31 I Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PCDDNCKO_01682 6.9e-139 cdsA 2.7.7.41 S Belongs to the CDS family
PCDDNCKO_01683 7.3e-214 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PCDDNCKO_01684 1.1e-231 rasP M zinc metalloprotease
PCDDNCKO_01685 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PCDDNCKO_01686 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PCDDNCKO_01687 3.9e-81 rimP S Required for maturation of 30S ribosomal subunits
PCDDNCKO_01688 5.4e-206 nusA K Participates in both transcription termination and antitermination
PCDDNCKO_01689 1.7e-36 ylxR K nucleic-acid-binding protein implicated in transcription termination
PCDDNCKO_01690 1.8e-47 ylxQ J ribosomal protein
PCDDNCKO_01691 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PCDDNCKO_01692 3.9e-44 ylxP S protein conserved in bacteria
PCDDNCKO_01693 3.3e-56 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PCDDNCKO_01694 8e-171 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PCDDNCKO_01695 3e-181 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PCDDNCKO_01696 1e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PCDDNCKO_01697 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PCDDNCKO_01698 1.8e-181 ylxY 3.5.1.104 G Sporulation protein, polysaccharide deacetylase
PCDDNCKO_01699 3.6e-235 pepR S Belongs to the peptidase M16 family
PCDDNCKO_01700 2.6e-42 ymxH S YlmC YmxH family
PCDDNCKO_01701 3.6e-160 spoVFA 1.1.1.29, 1.1.1.399, 1.1.1.95 CH Dipicolinate synthase subunit A
PCDDNCKO_01702 2e-106 spoVFB H Together with DpaA, catalyzes the conversion of dihydrodipicolinate to dipicolinate (DPA)
PCDDNCKO_01703 7.6e-194 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PCDDNCKO_01704 1.6e-219 dapG 1.1.1.3, 2.7.2.4 E Belongs to the aspartokinase family
PCDDNCKO_01705 6.2e-157 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PCDDNCKO_01706 1.2e-308 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PCDDNCKO_01707 1.3e-128 tepA 3.4.21.92 OU COG0740 Protease subunit of ATP-dependent Clp proteases
PCDDNCKO_01708 2.4e-30 S YlzJ-like protein
PCDDNCKO_01709 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PCDDNCKO_01710 1.8e-133 ymfC K Transcriptional regulator
PCDDNCKO_01711 2.4e-229 ymfD EGP Major facilitator Superfamily
PCDDNCKO_01712 6.2e-76 K helix_turn_helix multiple antibiotic resistance protein
PCDDNCKO_01713 0.0 ydgH S drug exporters of the RND superfamily
PCDDNCKO_01714 3.6e-238 ymfF S Peptidase M16
PCDDNCKO_01715 4.9e-243 ymfH S zinc protease
PCDDNCKO_01716 3e-128 ymfI 1.1.1.100, 1.3.1.28 S Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
PCDDNCKO_01717 9.7e-42 ymfJ S Protein of unknown function (DUF3243)
PCDDNCKO_01718 3.5e-143 ymfK S Protein of unknown function (DUF3388)
PCDDNCKO_01719 1.7e-125 ymfM S protein conserved in bacteria
PCDDNCKO_01720 3.8e-102 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PCDDNCKO_01721 3.8e-232 cinA 3.5.1.42 S Belongs to the CinA family
PCDDNCKO_01722 1.3e-185 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PCDDNCKO_01723 1.9e-193 pbpX V Beta-lactamase
PCDDNCKO_01724 4.2e-241 rny S Endoribonuclease that initiates mRNA decay
PCDDNCKO_01725 4.9e-153 ymdB S protein conserved in bacteria
PCDDNCKO_01726 1.2e-36 spoVS S Stage V sporulation protein S
PCDDNCKO_01727 2.1e-196 tdh 1.1.1.103 C Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate
PCDDNCKO_01728 3.9e-215 kbl 2.3.1.29, 2.3.1.47 H Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
PCDDNCKO_01729 2.7e-296 miaB 2.8.4.3 J Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PCDDNCKO_01730 3.5e-68 ymcA 3.6.3.21 S Belongs to the UPF0342 family
PCDDNCKO_01731 1.7e-88 cotE S Spore coat protein
PCDDNCKO_01732 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PCDDNCKO_01733 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PCDDNCKO_01734 3.2e-26 L Phage integrase family
PCDDNCKO_01735 2.2e-22
PCDDNCKO_01736 2.9e-39
PCDDNCKO_01737 9.9e-70 A Pre-toxin TG
PCDDNCKO_01739 3.3e-129 pksB 3.1.2.6 S Polyketide biosynthesis
PCDDNCKO_01740 3.2e-161 fabD 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
PCDDNCKO_01741 8.7e-184 pksD Q Acyl transferase domain
PCDDNCKO_01742 0.0 fabD 1.13.12.16, 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
PCDDNCKO_01743 1.9e-34 acpK IQ Phosphopantetheine attachment site
PCDDNCKO_01744 8.2e-243 pksG 2.3.3.10 I synthase
PCDDNCKO_01745 1.2e-143 pksH 4.2.1.18 I enoyl-CoA hydratase
PCDDNCKO_01746 2.9e-139 pksI I Belongs to the enoyl-CoA hydratase isomerase family
PCDDNCKO_01747 0.0 rhiB IQ polyketide synthase
PCDDNCKO_01748 0.0 Q Polyketide synthase of type I
PCDDNCKO_01749 0.0 pfaA 4.1.1.35 GT4 Q Polyketide synthase of type I
PCDDNCKO_01750 0.0 dhbF IQ polyketide synthase
PCDDNCKO_01751 0.0 pks13 HQ Beta-ketoacyl synthase
PCDDNCKO_01752 5.8e-230 cypA C Cytochrome P450
PCDDNCKO_01753 3.2e-77 nucB M Deoxyribonuclease NucA/NucB
PCDDNCKO_01754 5.1e-117 yoaK S Membrane
PCDDNCKO_01755 1.4e-62 ymzB
PCDDNCKO_01756 4.4e-255 aprX O Belongs to the peptidase S8 family
PCDDNCKO_01758 7.8e-126 ymaC S Replication protein
PCDDNCKO_01759 6e-79 ymaD O redox protein, regulator of disulfide bond formation
PCDDNCKO_01760 4.4e-53 ebrB P Small Multidrug Resistance protein
PCDDNCKO_01761 3.1e-48 ebrA P Small Multidrug Resistance protein
PCDDNCKO_01763 1.4e-47 ymaF S YmaF family
PCDDNCKO_01764 1.5e-172 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PCDDNCKO_01765 1.1e-33 hfq J RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs
PCDDNCKO_01766 1.5e-22
PCDDNCKO_01767 1.8e-20 ymzA
PCDDNCKO_01768 1.7e-66 nrdI 1.17.4.1 F Probably involved in ribonucleotide reductase function
PCDDNCKO_01769 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PCDDNCKO_01770 4.5e-188 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PCDDNCKO_01771 9e-110 ymaB S MutT family
PCDDNCKO_01772 3.7e-113 cwlC 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
PCDDNCKO_01773 1.3e-176 spoVK O stage V sporulation protein K
PCDDNCKO_01774 1.9e-231 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PCDDNCKO_01775 4.8e-243 ynbB 4.4.1.1 P COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance
PCDDNCKO_01776 1.6e-67 glnR K transcriptional
PCDDNCKO_01777 1.9e-261 glnA 6.3.1.2 E glutamine synthetase
PCDDNCKO_01778 1.7e-30
PCDDNCKO_01779 2.8e-32 S nuclease activity
PCDDNCKO_01782 5.8e-22
PCDDNCKO_01783 3.2e-21
PCDDNCKO_01785 3e-209 mrjp G Major royal jelly protein
PCDDNCKO_01787 2.8e-252 xynT G MFS/sugar transport protein
PCDDNCKO_01788 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
PCDDNCKO_01789 6.2e-213 xylR GK ROK family
PCDDNCKO_01790 1.4e-261 xylA 5.3.1.5 G Belongs to the xylose isomerase family
PCDDNCKO_01791 5.4e-286 xylB 2.7.1.12, 2.7.1.17, 2.7.1.189 G xylulose kinase
PCDDNCKO_01792 0.0 pps 2.7.9.2 GT phosphoenolpyruvate synthase
PCDDNCKO_01795 1.7e-15
PCDDNCKO_01796 2.2e-120 K WYL domain
PCDDNCKO_01797 7.6e-67 S DinB family
PCDDNCKO_01798 3.3e-186 adhP 1.1.1.1 C alcohol dehydrogenase
PCDDNCKO_01800 1.9e-16
PCDDNCKO_01802 9.8e-143 yoaP 3.1.3.18 K YoaP-like
PCDDNCKO_01803 3.1e-304 yobL L A nuclease of the HNH/ENDO VII superfamily with conserved LHH
PCDDNCKO_01804 3.1e-51 S SMI1-KNR4 cell-wall
PCDDNCKO_01805 2.2e-59 yokK S SMI1 / KNR4 family
PCDDNCKO_01806 2.9e-07 S Acetyltransferase (GNAT) domain
PCDDNCKO_01809 3.1e-118 ynaE S Domain of unknown function (DUF3885)
PCDDNCKO_01810 1.5e-200 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PCDDNCKO_01811 1.2e-117 AA10,CBM73 S Pfam:Chitin_bind_3
PCDDNCKO_01813 5e-23 yvgO
PCDDNCKO_01814 4.6e-94 yvgO
PCDDNCKO_01816 0.0 yobO M Pectate lyase superfamily protein
PCDDNCKO_01817 2.9e-78 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F Deoxyuridine 5'-triphosphate
PCDDNCKO_01818 1.3e-143 yndL S Replication protein
PCDDNCKO_01820 1.4e-137 O COG0330 Membrane protease subunits, stomatin prohibitin homologs
PCDDNCKO_01821 6.6e-70 yndM S Protein of unknown function (DUF2512)
PCDDNCKO_01822 1.7e-11 yoaW
PCDDNCKO_01823 9e-110 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PCDDNCKO_01824 6.2e-51 yneA D Inhibits cell division during the SOS response. Affects a later stage of the cell division protein assembly, after the assembly of the Z ring, by probably suppressing recruitment of FtsL and or DivIC to the division machinery
PCDDNCKO_01825 7.7e-112 yneB L resolvase
PCDDNCKO_01826 9.8e-33 ynzC S UPF0291 protein
PCDDNCKO_01827 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PCDDNCKO_01828 8.3e-81 yneE S Sporulation inhibitor of replication protein sirA
PCDDNCKO_01829 2.3e-28 yneF S UPF0154 protein
PCDDNCKO_01830 3.1e-23 ynzD S Spo0E like sporulation regulatory protein
PCDDNCKO_01831 1.7e-125 ccdA O cytochrome c biogenesis protein
PCDDNCKO_01832 4.7e-58 cheB 3.1.1.61, 3.5.1.44 T cheY-homologous receiver domain
PCDDNCKO_01833 8.6e-76 yneJ O COG4846 Membrane protein involved in cytochrome C biogenesis
PCDDNCKO_01834 8.5e-75 yneK S Protein of unknown function (DUF2621)
PCDDNCKO_01835 3.2e-62 hspX O Spore coat protein
PCDDNCKO_01836 2.3e-19 sspP S Belongs to the SspP family
PCDDNCKO_01837 7.5e-15 sspO S Belongs to the SspO family
PCDDNCKO_01838 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PCDDNCKO_01839 1.1e-92 yneN CO alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
PCDDNCKO_01841 2.7e-33 tlp S Belongs to the Tlp family
PCDDNCKO_01842 8.3e-75 yneP S Thioesterase-like superfamily
PCDDNCKO_01843 3.7e-53 yneQ
PCDDNCKO_01844 1.3e-50 yneR S Belongs to the HesB IscA family
PCDDNCKO_01845 1.4e-93 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PCDDNCKO_01846 1.5e-68 yccU S CoA-binding protein
PCDDNCKO_01847 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PCDDNCKO_01848 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PCDDNCKO_01849 4.6e-13
PCDDNCKO_01850 5.1e-41 ynfC
PCDDNCKO_01851 8.6e-249 agcS E Sodium alanine symporter
PCDDNCKO_01852 1.3e-179 kdgK 2.7.1.45 G COG0524 Sugar kinases, ribokinase family
PCDDNCKO_01853 3.2e-189 rspB 1.1.1.380 E Alcohol dehydrogenase GroES-like domain
PCDDNCKO_01854 6.8e-113 eda 4.1.2.14, 4.1.3.42 G 2-dehydro-3-deoxy-phosphogluconate aldolase
PCDDNCKO_01855 2.9e-212 uxuA 4.2.1.8 G Catalyzes the dehydration of D-mannonate
PCDDNCKO_01856 2.3e-148 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PCDDNCKO_01857 2.4e-181 kdgR_1 K transcriptional
PCDDNCKO_01858 5.6e-223 exuT G Sugar (and other) transporter
PCDDNCKO_01859 7.1e-155 yndG S DoxX-like family
PCDDNCKO_01860 1.5e-77 yndH S Domain of unknown function (DUF4166)
PCDDNCKO_01861 1.8e-303 yndJ S YndJ-like protein
PCDDNCKO_01863 3.3e-26
PCDDNCKO_01865 6.2e-138 S COG0457 FOG TPR repeat
PCDDNCKO_01867 4e-09
PCDDNCKO_01870 3.9e-83 S Protein of unknown function (DUF1430)
PCDDNCKO_01871 4e-65 V ABC transporter
PCDDNCKO_01873 1.4e-14
PCDDNCKO_01874 7.4e-91 S Platelet-activating factor acetylhydrolase, isoform II
PCDDNCKO_01875 2.8e-290 bglC5 3.2.1.4 GH5,GH9 G PFAM glycoside hydrolase family 5
PCDDNCKO_01876 1.3e-51 S Domain of unknown function (DUF4870)
PCDDNCKO_01877 7.7e-234 T PhoQ Sensor
PCDDNCKO_01878 7.6e-129 T Transcriptional regulatory protein, C terminal
PCDDNCKO_01879 7.4e-252 xynC 3.2.1.136 GH5 G Glycosyl hydrolase family 30 beta sandwich domain
PCDDNCKO_01880 1.3e-287 xynD3 3.2.1.55 CBM6,GH43 G Belongs to the glycosyl hydrolase 43 family
PCDDNCKO_01881 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PCDDNCKO_01882 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PCDDNCKO_01883 0.0 nrsA Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PCDDNCKO_01884 1.9e-225 fabD 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
PCDDNCKO_01885 6.9e-139 IQ Catalyzes the formation of acetoacetate from 3-hydroxybutyrate
PCDDNCKO_01886 2.4e-121 scoB 2.8.3.5 I COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
PCDDNCKO_01887 6.4e-125 scoA 2.8.3.5 I COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
PCDDNCKO_01888 1.1e-251 yxjC EG COG2610 H gluconate symporter and related permeases
PCDDNCKO_01889 8.3e-221 bioI 1.14.14.46 C Cytochrome P450
PCDDNCKO_01890 3.7e-193 bioB 2.8.1.6 H Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
PCDDNCKO_01891 1.3e-128 bioD 6.3.3.3 H Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
PCDDNCKO_01892 2.6e-211 bioF 2.3.1.29, 2.3.1.47, 6.2.1.14 H Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
PCDDNCKO_01893 2.1e-260 bioA 2.6.1.105, 2.6.1.62 H Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor
PCDDNCKO_01894 6.3e-145 bioW 2.3.1.47, 6.2.1.14 H Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP
PCDDNCKO_01895 1.9e-71 yngA S membrane
PCDDNCKO_01896 8.6e-162 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PCDDNCKO_01897 3.2e-104 yngC S SNARE associated Golgi protein
PCDDNCKO_01898 6.3e-290 yngE 2.1.3.15, 6.4.1.3 I COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PCDDNCKO_01899 2.4e-136 yngF 4.2.1.17 I Belongs to the enoyl-CoA hydratase isomerase family
PCDDNCKO_01900 2.5e-169 mvaB 4.1.3.4, 6.4.1.4 E Hydroxymethylglutaryl-CoA lyase
PCDDNCKO_01901 2.4e-30 pycB 2.3.1.12, 6.4.1.1 I Biotin carboxyl carrier protein
PCDDNCKO_01902 3.9e-251 yngH 6.3.4.14, 6.4.1.2, 6.4.1.3, 6.4.1.4 I Biotin carboxylase
PCDDNCKO_01903 0.0 yngI IQ COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
PCDDNCKO_01904 5.4e-209 yngJ 1.3.8.1, 1.3.99.12 I acyl-CoA dehydrogenase
PCDDNCKO_01905 7.8e-304 yngK T Glycosyl hydrolase-like 10
PCDDNCKO_01906 7.1e-65 yngL S Protein of unknown function (DUF1360)
PCDDNCKO_01907 0.0 Q D-alanine [D-alanyl carrier protein] ligase activity
PCDDNCKO_01908 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PCDDNCKO_01909 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PCDDNCKO_01910 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PCDDNCKO_01911 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PCDDNCKO_01912 5.4e-270 dacC 3.4.16.4 M D-alanyl-D-alanine carboxypeptidase
PCDDNCKO_01913 1.1e-186 yoxA 5.1.3.3 G Aldose 1-epimerase
PCDDNCKO_01914 1.8e-246 yoeA V MATE efflux family protein
PCDDNCKO_01915 1e-96 yoeB S IseA DL-endopeptidase inhibitor
PCDDNCKO_01917 3.5e-97 L Integrase
PCDDNCKO_01918 1.8e-34 yoeD G Helix-turn-helix domain
PCDDNCKO_01919 0.0 ggt 2.3.2.2, 3.4.19.13 E gamma-glutamyltransferase
PCDDNCKO_01920 1.6e-200 ybcL EGP Major facilitator Superfamily
PCDDNCKO_01921 6.7e-50 ybzH K Helix-turn-helix domain
PCDDNCKO_01922 2.5e-14 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PCDDNCKO_01923 1e-54 gltR1 K Transcriptional regulator
PCDDNCKO_01924 6.5e-187 yogA C COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases
PCDDNCKO_01925 1.4e-33 1.16.3.1 S Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
PCDDNCKO_01926 1.9e-291 gltD 1.4.1.13, 1.4.1.14 E COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases
PCDDNCKO_01927 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase
PCDDNCKO_01928 1.6e-152 gltC K Transcriptional regulator
PCDDNCKO_01929 8.1e-202 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PCDDNCKO_01930 3.7e-140 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PCDDNCKO_01931 9.5e-62 rtp K Plays a role in DNA replication and termination (fork arrest mechanism). Two dimers of rtp bind to the two inverted repeat regions (IRI and IRII) present in the termination site. The binding of each dimer is centered on an 8 bp direct repeat
PCDDNCKO_01932 5.2e-125 fabG 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PCDDNCKO_01933 4.7e-43 yoxC S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PCDDNCKO_01934 1.4e-136 yoxB
PCDDNCKO_01935 1.9e-204 yoaB EGP Major facilitator Superfamily
PCDDNCKO_01936 1.8e-273 yoaC 2.7.1.12, 2.7.1.17, 2.7.1.189 G FGGY family of carbohydrate kinases, C-terminal domain
PCDDNCKO_01937 2.1e-193 yoaD 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PCDDNCKO_01938 0.0 yoaE C belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PCDDNCKO_01939 6.3e-26 yoaF
PCDDNCKO_01941 4.3e-98 hpr K helix_turn_helix multiple antibiotic resistance protein
PCDDNCKO_01942 1.1e-43
PCDDNCKO_01943 2.6e-77 S SMI1-KNR4 cell-wall
PCDDNCKO_01944 3.6e-292 yobL L A nuclease of the HNH/ENDO VII superfamily with conserved LHH
PCDDNCKO_01945 4.9e-54 csaA 6.1.1.10, 6.1.1.20, 6.1.1.6 J tRNA-binding protein
PCDDNCKO_01946 1e-133 yobQ K helix_turn_helix, arabinose operon control protein
PCDDNCKO_01947 1.2e-92 yobS K Transcriptional regulator
PCDDNCKO_01948 1.3e-136 yobT S COG0491 Zn-dependent hydrolases, including glyoxylases
PCDDNCKO_01949 1.9e-92 yobW
PCDDNCKO_01950 1.7e-54 czrA K transcriptional
PCDDNCKO_01951 3.9e-119 pvaA M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
PCDDNCKO_01952 6.9e-90 yozB S membrane
PCDDNCKO_01953 1.5e-138 yocB J Protein required for attachment to host cells
PCDDNCKO_01954 1.6e-93 yocC
PCDDNCKO_01955 6.7e-184 yocD 3.4.17.13 V peptidase S66
PCDDNCKO_01957 1e-114 yocH CBM50 M COG1388 FOG LysM repeat
PCDDNCKO_01958 0.0 recQ 3.6.4.12 L DNA helicase
PCDDNCKO_01959 2.2e-111 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PCDDNCKO_01961 2.3e-60 dksA T general stress protein
PCDDNCKO_01962 1e-09 yocL
PCDDNCKO_01963 1.7e-08
PCDDNCKO_01964 2e-88 yocM O Belongs to the small heat shock protein (HSP20) family
PCDDNCKO_01965 1.4e-43 yozN
PCDDNCKO_01966 8.5e-37 yocN
PCDDNCKO_01967 2.4e-56 yozO S Bacterial PH domain
PCDDNCKO_01969 1.6e-31 yozC
PCDDNCKO_01970 1.3e-287 dhaS 1.2.1.3, 1.2.1.39 C Belongs to the aldehyde dehydrogenase family
PCDDNCKO_01971 8.8e-292 sqhC 4.2.1.137, 5.4.99.7 I COG1657 Squalene cyclase
PCDDNCKO_01972 2.3e-49 sqhC 4.2.1.137, 5.4.99.7 I COG1657 Squalene cyclase
PCDDNCKO_01973 3.2e-166 sodA 1.15.1.1 P Superoxide dismutase
PCDDNCKO_01974 5.1e-235 yocR S Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
PCDDNCKO_01975 6e-161 yocS S -transporter
PCDDNCKO_01976 8.5e-139 S Metallo-beta-lactamase superfamily
PCDDNCKO_01977 7.2e-183 sucB 2.3.1.61 C The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2)
PCDDNCKO_01978 0.0 sucA 1.2.4.2, 4.1.1.71 C The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components 2- oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3)
PCDDNCKO_01979 0.0 yojO P Von Willebrand factor
PCDDNCKO_01980 3.5e-163 yojN S ATPase family associated with various cellular activities (AAA)
PCDDNCKO_01981 2.1e-108 sodC 1.15.1.1 P Destroys radicals which are normally produced within the cells and which are toxic to biological systems
PCDDNCKO_01982 2.8e-227 sle1 3.5.1.28 CBM50 M COG1388 FOG LysM repeat
PCDDNCKO_01983 6.9e-223 yojK CG UDP-glucoronosyl and UDP-glucosyl transferase
PCDDNCKO_01984 4.8e-111 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PCDDNCKO_01986 1.3e-241 norM V Multidrug efflux pump
PCDDNCKO_01987 1.2e-149 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PCDDNCKO_01988 2.5e-126 yojG S deacetylase
PCDDNCKO_01989 9.7e-61 yojF S Protein of unknown function (DUF1806)
PCDDNCKO_01990 4.9e-23
PCDDNCKO_01991 9.2e-164 rarD S -transporter
PCDDNCKO_01992 3.3e-80 yozR S COG0071 Molecular chaperone (small heat shock protein)
PCDDNCKO_01994 1.6e-67 yodA S tautomerase
PCDDNCKO_01995 1.4e-70 yoaQ S Evidence 4 Homologs of previously reported genes of
PCDDNCKO_01996 3e-56 yodB K transcriptional
PCDDNCKO_01997 4.5e-106 yodC C nitroreductase
PCDDNCKO_01998 2.3e-110 mhqD S Carboxylesterase
PCDDNCKO_01999 2.5e-172 yodE E COG0346 Lactoylglutathione lyase and related lyases
PCDDNCKO_02000 1.4e-19 S Protein of unknown function (DUF3311)
PCDDNCKO_02001 3.5e-269 yodF E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PCDDNCKO_02002 2.8e-279 3.2.1.45 GH30 M Glycosyl hydrolase family 30 beta sandwich domain
PCDDNCKO_02003 1.6e-290 bglA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PCDDNCKO_02004 1.5e-132 yydK K Transcriptional regulator
PCDDNCKO_02005 5.1e-254 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
PCDDNCKO_02006 2.4e-127 yodH Q Methyltransferase
PCDDNCKO_02007 4.3e-34 yodI
PCDDNCKO_02008 8.7e-145 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
PCDDNCKO_02009 3.5e-126 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
PCDDNCKO_02011 3.3e-55 yodL S YodL-like
PCDDNCKO_02012 6.2e-103 yodM 3.6.1.27 I Acid phosphatase homologues
PCDDNCKO_02013 6.2e-24 yozD S YozD-like protein
PCDDNCKO_02015 4.9e-125 yodN
PCDDNCKO_02016 9.1e-36 yozE S Belongs to the UPF0346 family
PCDDNCKO_02017 8.3e-47 yokU S YokU-like protein, putative antitoxin
PCDDNCKO_02018 3.6e-279 kamA 5.4.3.2 E lysine 2,3-aminomutase
PCDDNCKO_02019 7.3e-158 yodP 2.3.1.264 K Acetyltransferase (GNAT) family
PCDDNCKO_02020 1.6e-254 yodQ 3.5.1.16 E Acetylornithine deacetylase
PCDDNCKO_02021 6.7e-122 scoB 2.8.3.5, 2.8.3.8, 2.8.3.9 I COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
PCDDNCKO_02022 1.7e-125 yodS 2.8.3.8, 2.8.3.9 I COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
PCDDNCKO_02023 6.2e-249 yodT H Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PCDDNCKO_02024 5.4e-64 yosT L Bacterial transcription activator, effector binding domain
PCDDNCKO_02026 8.3e-145 yiiD K acetyltransferase
PCDDNCKO_02027 1.7e-248 cgeD M maturation of the outermost layer of the spore
PCDDNCKO_02028 1.1e-41 cgeC
PCDDNCKO_02029 1.6e-52 cgeA
PCDDNCKO_02030 4.4e-180 cgeB S Spore maturation protein
PCDDNCKO_02031 9.8e-219 phy 3.1.3.8 I Myo-inositol-hexaphosphate 3-phosphohydrolase
PCDDNCKO_02032 7.9e-73 4.2.1.115 GM Polysaccharide biosynthesis protein
PCDDNCKO_02037 6.9e-75 yoqH M LysM domain
PCDDNCKO_02038 1.3e-194 S aspartate phosphatase
PCDDNCKO_02040 9.4e-16 3.4.24.40 S amine dehydrogenase activity
PCDDNCKO_02041 3.2e-67 3.4.24.40 S amine dehydrogenase activity
PCDDNCKO_02042 2.5e-39 3.4.24.40 S amine dehydrogenase activity
PCDDNCKO_02045 4e-62 S SMI1-KNR4 cell-wall
PCDDNCKO_02046 4.3e-277 yobL L A nuclease of the HNH/ENDO VII superfamily with conserved LHH
PCDDNCKO_02047 5.6e-56 G SMI1-KNR4 cell-wall
PCDDNCKO_02048 4.5e-19 G SMI1-KNR4 cell-wall
PCDDNCKO_02049 3.5e-76 yokF 3.1.31.1 L RNA catabolic process
PCDDNCKO_02052 6.9e-306 yokA L Recombinase
PCDDNCKO_02053 4.7e-105 4.2.1.115 GM Polysaccharide biosynthesis protein
PCDDNCKO_02054 3.6e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PCDDNCKO_02055 5.4e-103 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PCDDNCKO_02056 1.4e-66 ypoP K transcriptional
PCDDNCKO_02057 8e-97 ypmS S protein conserved in bacteria
PCDDNCKO_02058 4e-136 ypmR E GDSL-like Lipase/Acylhydrolase
PCDDNCKO_02059 8.7e-107 ypmQ S protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems
PCDDNCKO_02060 2.6e-39 ypmP S Protein of unknown function (DUF2535)
PCDDNCKO_02061 2.2e-243 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PCDDNCKO_02062 6.1e-177 pspF K Transcriptional regulator
PCDDNCKO_02063 9.3e-110 hlyIII S protein, Hemolysin III
PCDDNCKO_02064 1.4e-115 ypkP 2.3.1.40, 2.3.1.51, 6.2.1.20 I Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
PCDDNCKO_02065 1.3e-90 folA 1.1.1.262, 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PCDDNCKO_02066 8.7e-158 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PCDDNCKO_02067 2.7e-114 ypjP S YpjP-like protein
PCDDNCKO_02068 2.6e-130 ypiP 2.1.1.242 AJ Putative SAM-dependent methyltransferase
PCDDNCKO_02069 1e-75 yphP S Belongs to the UPF0403 family
PCDDNCKO_02070 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
PCDDNCKO_02071 1.3e-154 ypgR C COG0694 Thioredoxin-like proteins and domains
PCDDNCKO_02072 7.8e-98 ypgQ S phosphohydrolase
PCDDNCKO_02073 3.7e-87 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
PCDDNCKO_02074 1.1e-177 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PCDDNCKO_02075 1.5e-214 ugtP 2.4.1.315 GT28 M Processive glucosyltransferase involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. Is able to successively transfer up to three glucosyl residues to diacylglycerol (DAG), thereby catalyzing the formation of beta-monoglucosyl-DAG (3-O-(beta-D-glucopyranosyl)-1,2-diacyl- sn-glycerol), beta-diglucosyl-DAG (3-O-(beta-D-glucopyranosyl- beta-(1- 6)-D-glucopyranosyl)-1,2-diacyl-sn-glycerol) and beta- triglucosyl-DAG (3-O-(beta-D-glucopyranosyl-beta-(1- 6)-D- glucopyranosyl-beta-(1- 6)-D-glucopyranosyl)-1,2-diacyl-sn- glycerol). Beta-diglucosyl-DAG is the predominant glycolipid found in Bacillales and is also used as a membrane anchor for lipoteichoic acid (LTA)
PCDDNCKO_02076 1e-30 cspD K Cold-shock protein
PCDDNCKO_02077 3.3e-12 degR
PCDDNCKO_02078 6.1e-36 S Protein of unknown function (DUF2564)
PCDDNCKO_02079 1.5e-28 ypeQ S Zinc-finger
PCDDNCKO_02080 2.4e-124 ypeP 3.1.26.4 L COG0328 Ribonuclease HI
PCDDNCKO_02081 3.1e-119 ypdP S Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
PCDDNCKO_02082 1.1e-68 rnhA 3.1.26.4 L Ribonuclease
PCDDNCKO_02084 2.4e-164 polA 2.7.7.7 L 5'3' exonuclease
PCDDNCKO_02086 3.5e-39 ypbS S Protein of unknown function (DUF2533)
PCDDNCKO_02087 0.0 ypbR S Dynamin family
PCDDNCKO_02088 1e-87 ypbQ S protein conserved in bacteria
PCDDNCKO_02089 7e-206 bcsA Q Naringenin-chalcone synthase
PCDDNCKO_02090 2.7e-106 J Acetyltransferase (GNAT) domain
PCDDNCKO_02091 6.4e-48 ybaZ 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
PCDDNCKO_02093 4.2e-98 yrdC 3.5.1.19 Q Isochorismatase family
PCDDNCKO_02094 2.7e-27 K Helix-turn-helix domain
PCDDNCKO_02095 2.7e-14 S Membrane
PCDDNCKO_02096 9.8e-86 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
PCDDNCKO_02099 3.3e-73 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
PCDDNCKO_02100 9.3e-58 S Pfam:Phage_holin_4_1
PCDDNCKO_02102 1.8e-09
PCDDNCKO_02103 1.9e-99
PCDDNCKO_02104 0.0 S Peptidase_G2, IMC autoproteolytic cleavage domain
PCDDNCKO_02105 1e-227 NU Prophage endopeptidase tail
PCDDNCKO_02106 1.7e-103 S Phage tail protein
PCDDNCKO_02107 0.0 D phage tail tape measure protein
PCDDNCKO_02109 3e-81 S Phage tail tube protein
PCDDNCKO_02111 7.4e-49 S Bacteriophage HK97-gp10, putative tail-component
PCDDNCKO_02112 2.3e-40 S Phage head-tail joining protein
PCDDNCKO_02113 2e-38 S Phage gp6-like head-tail connector protein
PCDDNCKO_02114 4.8e-22
PCDDNCKO_02115 1.5e-154 gp36 S capsid protein
PCDDNCKO_02116 2.5e-83 S peptidase activity
PCDDNCKO_02117 1.1e-170 S Phage portal protein
PCDDNCKO_02118 3.1e-301 S Terminase
PCDDNCKO_02119 2.2e-77 L phage terminase small subunit
PCDDNCKO_02122 3.6e-18 K Transcriptional regulator
PCDDNCKO_02126 3.2e-68 xpf K COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
PCDDNCKO_02127 1.9e-111
PCDDNCKO_02128 2.7e-29
PCDDNCKO_02129 3.4e-21 yqaO S Phage-like element PBSX protein XtrA
PCDDNCKO_02131 2.9e-59 rusA L Endodeoxyribonuclease RusA
PCDDNCKO_02133 3.1e-117 xkdC L IstB-like ATP binding protein
PCDDNCKO_02134 2.3e-77 3.1.3.16 L DnaD domain protein
PCDDNCKO_02136 1.7e-61 pi112 3.6.4.12 L PDDEXK-like domain of unknown function (DUF3799)
PCDDNCKO_02137 1.6e-99
PCDDNCKO_02141 2e-87
PCDDNCKO_02142 5e-43 S Phage regulatory protein Rha (Phage_pRha)
PCDDNCKO_02143 3.8e-32
PCDDNCKO_02144 2.7e-16 K Helix-turn-helix XRE-family like proteins
PCDDNCKO_02145 2.3e-138 L Belongs to the 'phage' integrase family
PCDDNCKO_02146 5.1e-232 pbuX F xanthine
PCDDNCKO_02147 2.2e-97 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PCDDNCKO_02148 2.7e-293 ypwA 3.4.17.19 E Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
PCDDNCKO_02149 0.0 ypvA 3.6.4.12 KL COG1199 Rad3-related DNA helicases
PCDDNCKO_02151 6.6e-22 S YpzG-like protein
PCDDNCKO_02152 1.2e-216 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PCDDNCKO_02153 3.4e-46 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PCDDNCKO_02154 1.1e-98 ypsA S Belongs to the UPF0398 family
PCDDNCKO_02155 9.9e-33 cotD S Inner spore coat protein D
PCDDNCKO_02157 5e-237 yprB L RNase_H superfamily
PCDDNCKO_02158 0.0 yprA L COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster
PCDDNCKO_02159 2.7e-88 ypqE 2.7.1.199 G COG2190 Phosphotransferase system IIA components
PCDDNCKO_02160 1.7e-72 hspX O Belongs to the small heat shock protein (HSP20) family
PCDDNCKO_02161 5e-44 yppG S YppG-like protein
PCDDNCKO_02163 4.4e-11 yppE S Bacterial domain of unknown function (DUF1798)
PCDDNCKO_02166 2.8e-187 yppC S Protein of unknown function (DUF2515)
PCDDNCKO_02167 1e-110 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PCDDNCKO_02168 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PCDDNCKO_02169 1.7e-90 ypoC
PCDDNCKO_02170 4.9e-122 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PCDDNCKO_02171 3e-130 dnaD L DNA replication protein DnaD
PCDDNCKO_02172 9.9e-252 asnS 6.1.1.22 J asparaginyl-tRNA
PCDDNCKO_02173 9.7e-222 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
PCDDNCKO_02174 4e-81 ypmB S protein conserved in bacteria
PCDDNCKO_02175 6.7e-23 ypmA S Protein of unknown function (DUF4264)
PCDDNCKO_02176 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PCDDNCKO_02177 6e-64 panD 4.1.1.11 H Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
PCDDNCKO_02178 5e-159 panC 2.7.4.25, 6.3.2.1 H Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
PCDDNCKO_02179 3.1e-150 panB 2.1.2.11 H Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
PCDDNCKO_02180 2.1e-182 birA 6.3.4.15 K Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PCDDNCKO_02181 3.2e-220 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PCDDNCKO_02182 1.8e-209 bshA GT4 M N-acetyl-alpha-D-glucosaminyl L-malate synthase
PCDDNCKO_02183 5.6e-132 bshB1 S proteins, LmbE homologs
PCDDNCKO_02184 1.4e-71 mgsA 2.7.1.24, 4.2.3.3 G methylglyoxal synthase
PCDDNCKO_02185 9.1e-147 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PCDDNCKO_02186 1.8e-56 ypjD 2.5.1.19 S Nucleotide pyrophosphohydrolase
PCDDNCKO_02187 3.6e-157 ypjC S Uncharacterized protein conserved in bacteria (DUF2179)
PCDDNCKO_02188 1e-226 oxdC 4.1.1.2 G Oxalate decarboxylase
PCDDNCKO_02189 7.3e-141 ypjB S sporulation protein
PCDDNCKO_02190 2.1e-103 ypjA S membrane
PCDDNCKO_02191 3.9e-147 qcrC C Menaquinol-cytochrome c reductase cytochrome b c subunit
PCDDNCKO_02192 6.7e-127 petB C COG1290 Cytochrome b subunit of the bc complex
PCDDNCKO_02193 9.3e-97 qcrA C Menaquinol-cytochrome c reductase
PCDDNCKO_02194 4.7e-76 ypiF S Protein of unknown function (DUF2487)
PCDDNCKO_02195 2.1e-99 ypiB S Belongs to the UPF0302 family
PCDDNCKO_02196 7e-234 S COG0457 FOG TPR repeat
PCDDNCKO_02197 3.4e-236 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PCDDNCKO_02198 2.7e-205 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
PCDDNCKO_02199 1.7e-201 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PCDDNCKO_02200 1.6e-143 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PCDDNCKO_02201 4.9e-229 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PCDDNCKO_02202 1.5e-115 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E Belongs to the TrpF family
PCDDNCKO_02203 1.3e-131 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
PCDDNCKO_02204 1.6e-159 trpD 2.4.2.18, 4.1.3.27 E Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PCDDNCKO_02205 9.6e-294 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PCDDNCKO_02206 2.4e-60 aroH 2.7.4.25, 5.4.99.5 E Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis
PCDDNCKO_02207 1.1e-203 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PCDDNCKO_02208 9.4e-217 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PCDDNCKO_02209 3.6e-139 cheR 2.1.1.80 NT COG1352 Methylase of chemotaxis methyl-accepting proteins
PCDDNCKO_02210 2e-79 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
PCDDNCKO_02211 7.4e-197 hepT 2.5.1.30, 2.5.1.83, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PCDDNCKO_02212 1.2e-131 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PCDDNCKO_02213 6.9e-136 hepS 2.5.1.30 H Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
PCDDNCKO_02214 1.3e-34 mtrB K Required for transcription attenuation control in the Trp operon. This trans-acting factor seems to recognize a 10 bases nucleotide sequence in the Trp leader transcript causing transcription termination. Binds the leader RNA only in presence of L-tryptophan
PCDDNCKO_02215 5.4e-101 folE 3.5.4.16 H GTP cyclohydrolase
PCDDNCKO_02216 4.7e-42 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PCDDNCKO_02217 6.4e-279 spoIVA S ATPase. Has a role at an early stage in the morphogenesis of the spore coat
PCDDNCKO_02218 1.8e-133 yphF
PCDDNCKO_02219 3.3e-16 yphE S Protein of unknown function (DUF2768)
PCDDNCKO_02220 8.6e-190 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PCDDNCKO_02221 1.6e-249 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PCDDNCKO_02222 1.1e-104 yphA
PCDDNCKO_02223 4.7e-08 S YpzI-like protein
PCDDNCKO_02224 3.2e-184 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PCDDNCKO_02225 1.5e-206 rpsA 1.17.7.4 J Ribosomal protein S1
PCDDNCKO_02226 1e-111 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PCDDNCKO_02227 1.4e-12 S Family of unknown function (DUF5359)
PCDDNCKO_02228 1.5e-62 ypfA M Flagellar protein YcgR
PCDDNCKO_02229 4.2e-253 hemX 2.1.1.107, 4.2.1.75 H sporulation protein
PCDDNCKO_02230 7e-161 sleB 3.5.1.28 M Spore cortex-lytic enzyme
PCDDNCKO_02231 4.1e-121 prsW S Involved in the degradation of specific anti-sigma factors
PCDDNCKO_02232 4.5e-188 ypdA 1.18.1.2, 1.19.1.1, 1.8.1.9 O COG0492 Thioredoxin reductase
PCDDNCKO_02233 4e-245 gudB 1.4.1.2, 1.4.1.3 E Belongs to the Glu Leu Phe Val dehydrogenases family
PCDDNCKO_02234 2e-106 mecB NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
PCDDNCKO_02235 1.2e-146 ypbG S Calcineurin-like phosphoesterase superfamily domain
PCDDNCKO_02236 5.7e-85 ypbF S Protein of unknown function (DUF2663)
PCDDNCKO_02237 6.8e-75 ypbE M Lysin motif
PCDDNCKO_02238 9.9e-100 ypbD S metal-dependent membrane protease
PCDDNCKO_02239 9.4e-272 recQ 3.6.4.12 L DNA helicase
PCDDNCKO_02240 7e-195 ypbB 5.1.3.1 S protein conserved in bacteria
PCDDNCKO_02241 3.6e-41 fer C Ferredoxin
PCDDNCKO_02242 1.9e-93 fmnP U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PCDDNCKO_02243 9.7e-294 serA 1.1.1.399, 1.1.1.95 E Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PCDDNCKO_02244 4.8e-199 rsiX
PCDDNCKO_02245 2.6e-103 sigX K Belongs to the sigma-70 factor family. ECF subfamily
PCDDNCKO_02246 0.0 resE 2.7.13.3 T Histidine kinase
PCDDNCKO_02247 8.8e-133 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCDDNCKO_02248 2.5e-193 ccsA O 'COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component'
PCDDNCKO_02249 0.0 ccs1 O COG1333 ResB protein required for cytochrome c biosynthesis
PCDDNCKO_02250 1.6e-99 resA CO Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c
PCDDNCKO_02251 7.6e-132 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PCDDNCKO_02252 2.2e-88 spmB S Spore maturation protein
PCDDNCKO_02253 2e-103 spmA S Spore maturation protein
PCDDNCKO_02254 1.1e-214 dacB 3.4.16.4 M Belongs to the peptidase S11 family
PCDDNCKO_02255 3.8e-93 ypuI S Protein of unknown function (DUF3907)
PCDDNCKO_02256 7.8e-103 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PCDDNCKO_02257 2.1e-129 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PCDDNCKO_02259 3.5e-91 ypuF S Domain of unknown function (DUF309)
PCDDNCKO_02260 7.7e-64 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PCDDNCKO_02261 2.5e-80 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PCDDNCKO_02262 4.9e-229 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PCDDNCKO_02263 5e-111 ribE 2.5.1.9 H Riboflavin synthase
PCDDNCKO_02264 1.4e-209 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PCDDNCKO_02265 6.4e-49 ypuD
PCDDNCKO_02266 1.3e-99 sipT 3.4.21.89 U Belongs to the peptidase S26 family
PCDDNCKO_02267 1.8e-81 ccdC1 O Protein of unknown function (DUF1453)
PCDDNCKO_02268 4.4e-79 ppiB 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PCDDNCKO_02269 5.1e-154 ypuA S Secreted protein
PCDDNCKO_02270 1e-256 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PCDDNCKO_02271 1.2e-269 spoVAF EG Stage V sporulation protein AF
PCDDNCKO_02272 5.2e-110 spoVAEA S stage V sporulation protein
PCDDNCKO_02273 3.8e-57 spoVAEB S stage V sporulation protein
PCDDNCKO_02274 5e-190 spoVAD I Stage V sporulation protein AD
PCDDNCKO_02275 1.3e-78 spoVAC S stage V sporulation protein AC
PCDDNCKO_02276 3.9e-60 spoVAB S Stage V sporulation protein AB
PCDDNCKO_02277 4.8e-111 spoVAA S Stage V sporulation protein AA
PCDDNCKO_02278 6.9e-136 sigF K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PCDDNCKO_02279 1.8e-75 spoIIAB 2.7.11.1 F Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti-anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition
PCDDNCKO_02280 7.8e-58 spoIIAA T Belongs to the anti-sigma-factor antagonist family
PCDDNCKO_02281 7.4e-214 dacF 3.4.16.4 M Belongs to the peptidase S11 family
PCDDNCKO_02282 2.9e-148 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
PCDDNCKO_02283 2.3e-231 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
PCDDNCKO_02284 3.7e-165 xerD L recombinase XerD
PCDDNCKO_02285 3.7e-37 S Protein of unknown function (DUF4227)
PCDDNCKO_02286 1.9e-80 fur P Belongs to the Fur family
PCDDNCKO_02287 5.5e-110 spoIIM S Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane
PCDDNCKO_02288 1.7e-34 yqkK
PCDDNCKO_02289 5.7e-22
PCDDNCKO_02290 7.7e-244 mleA 1.1.1.38 C malic enzyme
PCDDNCKO_02291 1.3e-241 mleN C Na H antiporter
PCDDNCKO_02292 3.7e-268 aspA 4.2.1.2, 4.3.1.1 E Aspartate ammonia-lyase
PCDDNCKO_02293 2.9e-187 ansA 3.5.1.1 EJ L-asparaginase
PCDDNCKO_02294 2.3e-57 ansR K Transcriptional regulator
PCDDNCKO_02295 1.8e-220 yqxK 3.6.4.12 L DNA helicase
PCDDNCKO_02296 1.6e-94 nudF 3.6.1.13 L Belongs to the Nudix hydrolase family
PCDDNCKO_02298 6.3e-168 yqkF C oxidoreductases (related to aryl-alcohol dehydrogenases)
PCDDNCKO_02300 2.8e-176 yqkD S COG1073 Hydrolases of the alpha beta superfamily
PCDDNCKO_02301 3.2e-39 yqkC S Protein of unknown function (DUF2552)
PCDDNCKO_02302 7.7e-61 yqkB S Belongs to the HesB IscA family
PCDDNCKO_02303 9.6e-175 yqkA K GrpB protein
PCDDNCKO_02304 4.3e-61 yqjZ 2.3.1.128, 2.5.1.18 S enzyme involved in biosynthesis of extracellular polysaccharides
PCDDNCKO_02305 3.9e-89 yqjY K acetyltransferase
PCDDNCKO_02306 1.2e-235 polYB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PCDDNCKO_02307 1.2e-58 S YolD-like protein
PCDDNCKO_02309 1.8e-182 yueF S transporter activity
PCDDNCKO_02311 6.6e-74 yqjT 3.1.26.4 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PCDDNCKO_02312 2e-177 coaA 2.7.1.33 F Pantothenic acid kinase
PCDDNCKO_02313 1.8e-256 dsdA 4.3.1.18 E Belongs to the serine threonine dehydratase family. DsdA subfamily
PCDDNCKO_02314 1.9e-141 yqjQ S Belongs to the short-chain dehydrogenases reductases (SDR) family
PCDDNCKO_02315 2.5e-175 yqjP S COG0491 Zn-dependent hydrolases, including glyoxylases
PCDDNCKO_02316 3.6e-146 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PCDDNCKO_02317 2.6e-135 pksI I Belongs to the enoyl-CoA hydratase isomerase family
PCDDNCKO_02318 1.6e-238 pksG 2.3.3.10 I synthase
PCDDNCKO_02319 2e-219 eryK 1.14.13.154 C Cytochrome P450
PCDDNCKO_02320 0.0 pks13 1.6.5.5 C COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases
PCDDNCKO_02321 0.0 Q Polyketide synthase of type I
PCDDNCKO_02322 0.0 pfaA Q Polyketide synthase of type I
PCDDNCKO_02323 0.0 pksJ Q Polyketide synthase of type I
PCDDNCKO_02324 0.0 Q Polyketide synthase of type I
PCDDNCKO_02325 0.0 1.1.1.320 Q Polyketide synthase of type I
PCDDNCKO_02326 0.0 pksJ Q Polyketide synthase of type I
PCDDNCKO_02327 6e-129 IQ reductase
PCDDNCKO_02328 2e-247 IQ COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
PCDDNCKO_02331 0.0 fabD 1.13.12.16, 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
PCDDNCKO_02332 7.7e-94 nusG K Participates in transcription elongation, termination and antitermination
PCDDNCKO_02333 1.2e-163 K LysR substrate binding domain
PCDDNCKO_02334 2.5e-50 S GlpM protein
PCDDNCKO_02335 1.6e-193 namA 1.6.99.1 C Catalyzes the reduction of the double bond of an array of alpha,beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes
PCDDNCKO_02336 1.5e-146 yqjL S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
PCDDNCKO_02337 3.3e-172 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PCDDNCKO_02338 2.5e-291 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PCDDNCKO_02339 7.7e-266 gnd 1.1.1.343, 1.1.1.44 G Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PCDDNCKO_02340 3.3e-236 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PCDDNCKO_02341 2.4e-25 yqzJ
PCDDNCKO_02342 4.6e-149 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PCDDNCKO_02343 4.7e-202 yqjE 3.4.11.4 E COG2195 Di- and tripeptidases
PCDDNCKO_02344 1.2e-288 mmdA 2.1.3.15, 6.4.1.3 I COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PCDDNCKO_02345 3.6e-73 mce 4.4.1.5, 5.1.99.1, 5.4.99.2 E COG0346 Lactoylglutathione lyase and related lyases
PCDDNCKO_02347 3.1e-95 yqjB S protein conserved in bacteria
PCDDNCKO_02348 5.3e-170 yqjA S Putative aromatic acid exporter C-terminal domain
PCDDNCKO_02349 6.5e-128 artM 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
PCDDNCKO_02350 3.8e-106 artQ E COG0765 ABC-type amino acid transport system, permease component
PCDDNCKO_02351 9e-136 artP ET Belongs to the bacterial solute-binding protein 3 family
PCDDNCKO_02352 1e-75 yqiW S Belongs to the UPF0403 family
PCDDNCKO_02353 7.7e-171 yegS 2.7.1.107 I COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
PCDDNCKO_02354 1.7e-203 bfmBB 2.3.1.168, 2.3.1.61 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PCDDNCKO_02355 1e-184 bfmBAB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PCDDNCKO_02356 8.6e-163 bfmBAA 1.2.4.4 C COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PCDDNCKO_02357 1.2e-266 lpdA 1.8.1.4 C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PCDDNCKO_02358 2e-208 buk 2.7.2.7 C Belongs to the acetokinase family
PCDDNCKO_02359 2e-205 ldh 1.4.1.9 E Belongs to the Glu Leu Phe Val dehydrogenases family
PCDDNCKO_02360 4.3e-153 pta 2.3.1.19, 2.3.1.8 C phosphate butyryltransferase
PCDDNCKO_02361 0.0 bkdR 2.7.13.3 KT Transcriptional regulator
PCDDNCKO_02362 7e-34 yqzF S Protein of unknown function (DUF2627)
PCDDNCKO_02363 2.4e-159 prpB 4.1.3.30 G Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
PCDDNCKO_02364 1.7e-276 prpD 4.2.1.79 S 2-methylcitrate dehydratase
PCDDNCKO_02365 1.4e-206 prpC 2.3.3.1, 2.3.3.5 C Belongs to the citrate synthase family
PCDDNCKO_02366 4.2e-206 mmgC I acyl-CoA dehydrogenase
PCDDNCKO_02367 2.6e-152 hbdA 1.1.1.157 I Dehydrogenase
PCDDNCKO_02368 7e-212 mmgA 2.3.1.9 I Belongs to the thiolase family
PCDDNCKO_02369 5.6e-135 yqiK 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PCDDNCKO_02370 2.3e-105 amiC 3.5.1.28 M Cell wall hydrolase autolysin
PCDDNCKO_02371 2.5e-17
PCDDNCKO_02372 2e-101 ytaF P Probably functions as a manganese efflux pump
PCDDNCKO_02373 1.2e-112 K Protein of unknown function (DUF1232)
PCDDNCKO_02375 1.2e-213 yqiG C COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family
PCDDNCKO_02378 3.4e-214 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PCDDNCKO_02379 3.2e-144 KT May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process
PCDDNCKO_02380 9.5e-239 rseP 3.4.21.116 M Stage IV sporulation protein B
PCDDNCKO_02381 1.2e-305 recN L May be involved in recombinational repair of damaged DNA
PCDDNCKO_02382 3.9e-78 argR K Regulates arginine biosynthesis genes
PCDDNCKO_02383 5.6e-155 rrmJ 2.1.1.226, 2.1.1.227 J rRNA methylase
PCDDNCKO_02384 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PCDDNCKO_02385 2.3e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PCDDNCKO_02386 2e-39 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PCDDNCKO_02387 1.3e-243 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PCDDNCKO_02388 1.1e-155 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PCDDNCKO_02389 1.1e-65 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PCDDNCKO_02390 8.1e-67 yqhY S protein conserved in bacteria
PCDDNCKO_02391 1.2e-255 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
PCDDNCKO_02392 1.4e-62 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PCDDNCKO_02393 2.5e-62 spoIIIAH S SpoIIIAH-like protein
PCDDNCKO_02394 1e-117 spoIIIAG S stage III sporulation protein AG
PCDDNCKO_02395 6.9e-102 spoIIIAF S Stage III sporulation protein AF (Spore_III_AF)
PCDDNCKO_02396 2.4e-199 spoIIIAE S stage III sporulation protein AE
PCDDNCKO_02397 8.4e-57 spoIIIAD S Stage III sporulation protein AD
PCDDNCKO_02398 7.6e-29 spoIIIAC S stage III sporulation protein AC
PCDDNCKO_02399 1.7e-85 spoIIIAB S Stage III sporulation protein
PCDDNCKO_02400 3.2e-172 spoIIIAA S stage III sporulation protein AA
PCDDNCKO_02401 1.8e-36 yqhV S Protein of unknown function (DUF2619)
PCDDNCKO_02402 5.4e-98 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PCDDNCKO_02403 5.6e-176 yqhT 3.4.11.9, 3.4.13.9 E COG0006 Xaa-Pro aminopeptidase
PCDDNCKO_02404 4.9e-88 yqhR S Conserved membrane protein YqhR
PCDDNCKO_02405 8e-174 yqhQ S Protein of unknown function (DUF1385)
PCDDNCKO_02406 3.4e-62 yqhP
PCDDNCKO_02407 3.1e-164 yqhO S esterase of the alpha-beta hydrolase superfamily
PCDDNCKO_02408 2.7e-73 mntR K Involved in manganese homeostasis. Might activate the transcription of the mntABCD operon
PCDDNCKO_02409 3.4e-160 lipM 6.3.1.20 H Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation
PCDDNCKO_02410 2.7e-64 yqhL P COG0607 Rhodanese-related sulfurtransferase
PCDDNCKO_02411 2.2e-287 gcvPB 1.4.4.2 E The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PCDDNCKO_02412 8.7e-251 gcvPA 1.4.4.2 E The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PCDDNCKO_02413 3.3e-208 gcvT 1.4.4.2, 2.1.2.10 E The glycine cleavage system catalyzes the degradation of glycine
PCDDNCKO_02414 0.0 yqhH L COG0553 Superfamily II DNA RNA helicases, SNF2 family
PCDDNCKO_02415 8.4e-153 yqhG S Bacterial protein YqhG of unknown function
PCDDNCKO_02416 1.3e-21 sinI S Anti-repressor SinI
PCDDNCKO_02417 7.8e-55 sinR K transcriptional
PCDDNCKO_02418 3.3e-141 tasA S Cell division protein FtsN
PCDDNCKO_02419 3.5e-71 sipW 3.4.21.89 U Signal peptidase
PCDDNCKO_02420 7.2e-121 yqxM
PCDDNCKO_02421 1.3e-54 yqzG S Protein of unknown function (DUF3889)
PCDDNCKO_02422 2.3e-26 yqzE S YqzE-like protein
PCDDNCKO_02423 2.5e-62 S ComG operon protein 7
PCDDNCKO_02424 5.1e-66 comGF U Putative Competence protein ComGF
PCDDNCKO_02425 3.4e-20 comGE
PCDDNCKO_02426 2.6e-71 gspH NU Tfp pilus assembly protein FimT
PCDDNCKO_02427 7.5e-49 comGC U Required for transformation and DNA binding
PCDDNCKO_02428 3.5e-183 comGB NU COG1459 Type II secretory pathway, component PulF
PCDDNCKO_02429 2.3e-201 comGA NU COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
PCDDNCKO_02430 4.5e-185 corA P Mg2 transporter protein
PCDDNCKO_02431 2.8e-238 corC1 S COG1253 Hemolysins and related proteins containing CBS domains
PCDDNCKO_02432 1e-148 yqhA T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PCDDNCKO_02434 9.2e-65 yqgZ 1.20.4.1 P Belongs to the ArsC family
PCDDNCKO_02435 3.1e-37 yqgY S Protein of unknown function (DUF2626)
PCDDNCKO_02436 3.6e-122 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
PCDDNCKO_02437 5.4e-20 yqgW S Protein of unknown function (DUF2759)
PCDDNCKO_02438 6.9e-50 yqgV S Thiamine-binding protein
PCDDNCKO_02439 2.3e-198 yqgU
PCDDNCKO_02440 3.2e-222 yqgT 3.4.19.11 E Gamma-D-glutamyl-L-diamino acid endopeptidase
PCDDNCKO_02441 4.9e-179 glcK 2.7.1.2 G Glucokinase
PCDDNCKO_02442 1e-28 yqgQ S Protein conserved in bacteria
PCDDNCKO_02443 5e-230 nhaC C Na H antiporter
PCDDNCKO_02444 4e-07 yqgO
PCDDNCKO_02445 4.1e-98 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PCDDNCKO_02446 9.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PCDDNCKO_02447 1.2e-50 yqzD
PCDDNCKO_02448 1.6e-74 yqzC S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PCDDNCKO_02449 3.7e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PCDDNCKO_02450 1e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PCDDNCKO_02451 1.8e-156 pstA P Phosphate transport system permease
PCDDNCKO_02452 5.2e-154 pstC P probably responsible for the translocation of the substrate across the membrane
PCDDNCKO_02453 1.7e-157 pstS P Phosphate
PCDDNCKO_02454 0.0 pbpA 3.4.16.4 M penicillin-binding protein
PCDDNCKO_02455 2e-228 yqgE EGP Major facilitator superfamily
PCDDNCKO_02456 1.2e-114 sodA 1.15.1.1 P radicals which are normally produced within the cells and which are toxic to biological systems
PCDDNCKO_02457 6e-77 yqgC S protein conserved in bacteria
PCDDNCKO_02458 8.7e-131 yqgB S Protein of unknown function (DUF1189)
PCDDNCKO_02459 3.1e-47 yqfZ M LysM domain
PCDDNCKO_02460 4.1e-201 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PCDDNCKO_02461 2.3e-52 yqfX S membrane
PCDDNCKO_02462 6.5e-110 yqfW S Belongs to the 5'(3')-deoxyribonucleotidase family
PCDDNCKO_02463 2.9e-72 zur P Belongs to the Fur family
PCDDNCKO_02464 1.4e-156 yqfU S Uncharacterized protein conserved in bacteria (DUF2179)
PCDDNCKO_02465 1.6e-36 yqfT S Protein of unknown function (DUF2624)
PCDDNCKO_02466 4.4e-166 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PCDDNCKO_02467 4e-240 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PCDDNCKO_02468 6.2e-51 yqfQ S YqfQ-like protein
PCDDNCKO_02469 6.5e-176 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PCDDNCKO_02470 2.5e-211 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PCDDNCKO_02471 2.2e-126 trmK 2.1.1.217 S SAM-dependent methyltransferase
PCDDNCKO_02472 1.1e-62 cccA C COG2010 Cytochrome c, mono- and diheme variants
PCDDNCKO_02473 2.4e-201 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PCDDNCKO_02474 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PCDDNCKO_02475 6.1e-88 yaiI S Belongs to the UPF0178 family
PCDDNCKO_02476 2.9e-148 yqfL 2.7.11.33, 2.7.4.28 S Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PCDDNCKO_02477 4.5e-112 ccpN K CBS domain
PCDDNCKO_02478 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PCDDNCKO_02479 5.1e-175 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PCDDNCKO_02480 1.2e-143 recO L Involved in DNA repair and RecF pathway recombination
PCDDNCKO_02481 1.8e-16 S YqzL-like protein
PCDDNCKO_02482 4e-167 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PCDDNCKO_02483 7.1e-71 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PCDDNCKO_02484 1.3e-63 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
PCDDNCKO_02485 4.3e-80 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PCDDNCKO_02486 0.0 yqfF S membrane-associated HD superfamily hydrolase
PCDDNCKO_02487 8.6e-176 phoH T Phosphate starvation-inducible protein PhoH
PCDDNCKO_02488 6.8e-215 yqfD 3.1.3.102, 3.1.3.104 S Stage IV sporulation
PCDDNCKO_02489 9.3e-46 yqfC S sporulation protein YqfC
PCDDNCKO_02490 3.8e-54 yqfB
PCDDNCKO_02491 1.2e-119 yqfA S UPF0365 protein
PCDDNCKO_02492 3.4e-231 yqeZ O COG1030 Membrane-bound serine protease (ClpP class)
PCDDNCKO_02493 1.2e-68 yqeY S Yqey-like protein
PCDDNCKO_02494 1.2e-19 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PCDDNCKO_02495 3.5e-158 yqeW P COG1283 Na phosphate symporter
PCDDNCKO_02496 3.5e-260 yqeV 2.8.4.5 J ribosomal protein S12 methylthiotransferase
PCDDNCKO_02497 2e-138 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PCDDNCKO_02498 7.8e-174 prmA J Methylates ribosomal protein L11
PCDDNCKO_02499 1.1e-198 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PCDDNCKO_02500 0.0 dnaK O Heat shock 70 kDa protein
PCDDNCKO_02501 3.5e-76 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PCDDNCKO_02502 1.8e-187 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PCDDNCKO_02503 4.8e-218 hemN H Involved in the biosynthesis of porphyrin-containing compound
PCDDNCKO_02504 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PCDDNCKO_02505 3.8e-54 yqxA S Protein of unknown function (DUF3679)
PCDDNCKO_02506 1.4e-220 spoIIP M stage II sporulation protein P
PCDDNCKO_02507 2.3e-204 gpr 3.4.24.78 C Initiates the rapid degradation of small, acid-soluble proteins during spore germination
PCDDNCKO_02508 2.2e-36 rpsT J Binds directly to 16S ribosomal RNA
PCDDNCKO_02509 8.5e-182 holA 2.7.7.7 L DNA polymerase III delta subunit
PCDDNCKO_02510 0.0 comEC S Competence protein ComEC
PCDDNCKO_02511 8e-105 comEB 3.5.4.12 F ComE operon protein 2
PCDDNCKO_02512 2.8e-103 comEA L COG1555 DNA uptake protein and related DNA-binding proteins
PCDDNCKO_02513 2.5e-147 comER E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PCDDNCKO_02514 6.4e-139 yqeM Q Methyltransferase
PCDDNCKO_02515 3.4e-61 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PCDDNCKO_02516 3.3e-103 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
PCDDNCKO_02517 1.7e-107 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PCDDNCKO_02518 4.8e-45 yhbY J RNA-binding protein containing KH domain, possibly ribosomal protein
PCDDNCKO_02519 2.1e-157 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PCDDNCKO_02520 7.7e-213 yqeH S In Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
PCDDNCKO_02521 2e-94 yqeG S hydrolase of the HAD superfamily
PCDDNCKO_02523 1.5e-138 yqeF E GDSL-like Lipase/Acylhydrolase
PCDDNCKO_02524 4e-141 3.5.1.104 G Polysaccharide deacetylase
PCDDNCKO_02525 1.6e-106 yqeD S SNARE associated Golgi protein
PCDDNCKO_02526 1.4e-218 EGP Major facilitator Superfamily
PCDDNCKO_02527 4e-125 sigK K sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PCDDNCKO_02528 5.9e-58
PCDDNCKO_02529 3.9e-70
PCDDNCKO_02530 4.1e-21 V HNH endonuclease
PCDDNCKO_02531 7.1e-195 yobL S Bacterial EndoU nuclease
PCDDNCKO_02532 2.2e-20 S SMI1-KNR4 cell-wall
PCDDNCKO_02534 6.2e-149 ydeE K AraC family transcriptional regulator
PCDDNCKO_02535 3.9e-106 K Transcriptional regulator
PCDDNCKO_02536 1.3e-123 yecA E amino acid
PCDDNCKO_02537 3e-69 psiE S Belongs to the PsiE family
PCDDNCKO_02538 4.6e-233 yrkQ T Histidine kinase
PCDDNCKO_02539 1.6e-123 T Transcriptional regulator
PCDDNCKO_02540 2.9e-221 yrkO P Protein of unknown function (DUF418)
PCDDNCKO_02541 6.2e-102 yrkN K Acetyltransferase (GNAT) family
PCDDNCKO_02542 2e-97 adk 2.7.4.3 F adenylate kinase activity
PCDDNCKO_02543 3.6e-29 yyaR K acetyltransferase
PCDDNCKO_02544 5.6e-221 tetL EGP Major facilitator Superfamily
PCDDNCKO_02545 2e-81 yyaR K Acetyltransferase (GNAT) domain
PCDDNCKO_02546 1.5e-91 yrdA S DinB family
PCDDNCKO_02547 4.5e-146 S hydrolase
PCDDNCKO_02548 2.3e-72 ybjI 3.1.3.102, 3.1.3.104, 3.1.3.23 S Sucrose-6F-phosphate phosphohydrolase
PCDDNCKO_02549 1.4e-52 ybjI 3.1.3.102, 3.1.3.104, 3.1.3.23 S Sucrose-6F-phosphate phosphohydrolase
PCDDNCKO_02550 1.6e-129 glvR K Helix-turn-helix domain, rpiR family
PCDDNCKO_02551 2.5e-188 manA 5.3.1.8 G mannose-6-phosphate isomerase
PCDDNCKO_02552 0.0 manP 2.7.1.191, 2.7.1.202 G phosphotransferase system
PCDDNCKO_02553 0.0 manR 2.7.1.200, 2.7.1.202 GKT transcriptional antiterminator
PCDDNCKO_02554 1e-181 romA S Beta-lactamase superfamily domain
PCDDNCKO_02555 1.2e-82 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PCDDNCKO_02556 2e-163 yybE K Transcriptional regulator
PCDDNCKO_02557 1.2e-211 ynfM EGP Major facilitator Superfamily
PCDDNCKO_02558 0.0 MA20_16700 1.14.14.1, 1.6.2.4 C Belongs to the cytochrome P450 family
PCDDNCKO_02559 7.7e-100 Z012_03230 K Tetracycline repressor, C-terminal all-alpha domain
PCDDNCKO_02560 1.1e-92 yrhH Q methyltransferase
PCDDNCKO_02562 8e-143 focA P Formate nitrite
PCDDNCKO_02563 6e-61 yrhF S Uncharacterized conserved protein (DUF2294)
PCDDNCKO_02564 0.0 fdhA 1.17.1.10, 1.17.1.9 C formate dehydrogenase, alpha subunit
PCDDNCKO_02565 1e-79 yrhD S Protein of unknown function (DUF1641)
PCDDNCKO_02566 4.6e-35 yrhC S YrhC-like protein
PCDDNCKO_02567 1.1e-209 mccB 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PCDDNCKO_02568 2.7e-171 mccA 2.5.1.134, 2.5.1.47 E Cysteine synthase
PCDDNCKO_02569 1.1e-121 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PCDDNCKO_02570 6.4e-119 yrrT 4.4.1.21 Q Could be a S-adenosyl-L-methionine-dependent methyltransferase
PCDDNCKO_02571 4.1e-27 yrzA S Protein of unknown function (DUF2536)
PCDDNCKO_02572 8.9e-69 yrrS S Protein of unknown function (DUF1510)
PCDDNCKO_02573 0.0 pbpI 3.4.16.4 M Penicillin-binding Protein
PCDDNCKO_02574 3.1e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PCDDNCKO_02575 1.1e-113 udk 2.7.1.48 F Cytidine monophosphokinase
PCDDNCKO_02576 2.7e-246 yegQ O COG0826 Collagenase and related proteases
PCDDNCKO_02577 1.7e-173 yegQ O Peptidase U32
PCDDNCKO_02578 3.6e-117 yrrM 2.1.1.104 S O-methyltransferase
PCDDNCKO_02579 4.4e-184 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PCDDNCKO_02580 7.1e-46 yrzB S Belongs to the UPF0473 family
PCDDNCKO_02581 1.2e-70 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PCDDNCKO_02582 8.5e-41 yrzL S Belongs to the UPF0297 family
PCDDNCKO_02583 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PCDDNCKO_02584 2.4e-163 yrrI S AI-2E family transporter
PCDDNCKO_02585 4.1e-130 glnQ 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
PCDDNCKO_02586 3.2e-147 glnH ET Belongs to the bacterial solute-binding protein 3 family
PCDDNCKO_02587 8.8e-108 gluC P ABC transporter
PCDDNCKO_02588 2.9e-106 glnP P ABC transporter
PCDDNCKO_02589 2.1e-08 S Protein of unknown function (DUF3918)
PCDDNCKO_02590 2.9e-30 yrzR
PCDDNCKO_02591 1e-81 yrrD S protein conserved in bacteria
PCDDNCKO_02592 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PCDDNCKO_02593 1.7e-18 S COG0457 FOG TPR repeat
PCDDNCKO_02594 2.4e-222 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PCDDNCKO_02595 4e-212 iscS 2.8.1.7 E Cysteine desulfurase
PCDDNCKO_02596 7.8e-64 cymR K Transcriptional regulator
PCDDNCKO_02597 1.3e-235 rarA L COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase
PCDDNCKO_02598 2.8e-137 yrvM H COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
PCDDNCKO_02599 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PCDDNCKO_02600 9.7e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
PCDDNCKO_02603 2.6e-275 lytH 3.5.1.28 M COG3103 SH3 domain protein
PCDDNCKO_02604 1.8e-75 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PCDDNCKO_02605 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PCDDNCKO_02606 7.7e-91 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PCDDNCKO_02607 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PCDDNCKO_02608 5.7e-47 yrvD S Lipopolysaccharide assembly protein A domain
PCDDNCKO_02609 2.8e-85 yrvC P regulatory, ligand-binding protein related to C-terminal domains of K channels
PCDDNCKO_02610 0.0 secF U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PCDDNCKO_02611 3.8e-50 yrzD S Post-transcriptional regulator
PCDDNCKO_02612 9.4e-273 spoVB S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PCDDNCKO_02613 4.7e-109 yrbG S membrane
PCDDNCKO_02614 2.4e-60 yrzE S Protein of unknown function (DUF3792)
PCDDNCKO_02615 5.6e-37 yajC U Preprotein translocase subunit YajC
PCDDNCKO_02616 4e-228 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PCDDNCKO_02617 2.4e-192 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PCDDNCKO_02618 1.6e-20 yrzS S Protein of unknown function (DUF2905)
PCDDNCKO_02619 2.1e-185 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PCDDNCKO_02620 4.2e-104 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PCDDNCKO_02621 3.7e-93 bofC S BofC C-terminal domain
PCDDNCKO_02623 5.1e-46 S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PCDDNCKO_02624 4.4e-145 safA M spore coat assembly protein SafA
PCDDNCKO_02625 3.6e-210 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PCDDNCKO_02626 5.3e-153 nadC 1.4.3.16, 2.4.2.19 H Belongs to the NadC ModD family
PCDDNCKO_02627 2.6e-299 nadB 1.3.5.4, 1.4.3.16 H Catalyzes the oxidation of L-aspartate to iminoaspartate
PCDDNCKO_02628 8e-221 nifS 2.8.1.7 E Cysteine desulfurase
PCDDNCKO_02629 5.5e-95 niaR S small molecule binding protein (contains 3H domain)
PCDDNCKO_02630 1.3e-159 pheA 4.2.1.51 E Prephenate dehydratase
PCDDNCKO_02631 4.8e-73 pheB 5.4.99.5 S Belongs to the UPF0735 family
PCDDNCKO_02632 7.6e-236 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PCDDNCKO_02633 3.3e-106 spo0B T Sporulation initiation phospho-transferase B, C-terminal
PCDDNCKO_02634 5.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PCDDNCKO_02635 3.2e-56 ysxB J ribosomal protein
PCDDNCKO_02636 9.2e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
PCDDNCKO_02637 2.7e-160 spoIVFB S Stage IV sporulation protein
PCDDNCKO_02638 8.5e-145 spoIVFA M COG0739 Membrane proteins related to metalloendopeptidases
PCDDNCKO_02639 2.3e-142 minD D Belongs to the ParA family
PCDDNCKO_02640 1.5e-97 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PCDDNCKO_02641 1.4e-84 mreD M shape-determining protein
PCDDNCKO_02642 4.7e-157 mreC M Involved in formation and maintenance of cell shape
PCDDNCKO_02643 4e-184 mreB D Rod shape-determining protein MreB
PCDDNCKO_02644 1.8e-127 radC E Belongs to the UPF0758 family
PCDDNCKO_02645 2.4e-101 maf D septum formation protein Maf
PCDDNCKO_02646 8.7e-139 spoIIB S Sporulation related domain
PCDDNCKO_02647 1.5e-130 comC 3.4.23.43 NOU COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases
PCDDNCKO_02648 6.6e-240 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PCDDNCKO_02649 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PCDDNCKO_02650 2.1e-25
PCDDNCKO_02651 3.3e-197 ysxE S A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
PCDDNCKO_02652 1.5e-218 spoVID M stage VI sporulation protein D
PCDDNCKO_02653 1.8e-245 hemL 5.4.3.8 H Glutamate-1-semialdehyde aminotransferase
PCDDNCKO_02654 1e-184 hemB 4.2.1.24 H Belongs to the ALAD family
PCDDNCKO_02655 7.3e-141 hemD 2.1.1.107, 4.2.1.75 H Uroporphyrinogen-III synthase
PCDDNCKO_02656 2.4e-175 hemC 2.1.1.107, 2.5.1.61, 4.2.1.75 H Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps
PCDDNCKO_02657 3.6e-146 hemX O cytochrome C
PCDDNCKO_02658 4.5e-247 hemA 1.2.1.70 H Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
PCDDNCKO_02659 4.5e-88 ysxD
PCDDNCKO_02660 8.8e-107 engB D Necessary for normal cell division and for the maintenance of normal septation
PCDDNCKO_02661 0.0 lon 3.4.21.53 O ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
PCDDNCKO_02662 6e-310 lonB 2.7.7.7, 3.4.21.53 LO Belongs to the peptidase S16 family
PCDDNCKO_02663 7.7e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PCDDNCKO_02664 4.7e-214 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PCDDNCKO_02665 2.1e-188 ysoA H Tetratricopeptide repeat
PCDDNCKO_02666 6.2e-116 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PCDDNCKO_02667 3.1e-275 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PCDDNCKO_02668 9.7e-200 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PCDDNCKO_02669 1.8e-287 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PCDDNCKO_02670 1.2e-191 ilvC 1.1.1.86 EH Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PCDDNCKO_02671 2.1e-83 ilvN 2.2.1.6 E Acetolactate synthase
PCDDNCKO_02672 0.0 ilvB 2.2.1.6 E Acetolactate synthase
PCDDNCKO_02677 4.2e-89 ysnB S Phosphoesterase
PCDDNCKO_02678 1.1e-101 rdgB 3.6.1.66 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PCDDNCKO_02679 6.9e-133 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
PCDDNCKO_02680 8.1e-199 gerM S COG5401 Spore germination protein
PCDDNCKO_02681 2.7e-154 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PCDDNCKO_02682 4.8e-73 ysmB 2.4.2.28 K helix_turn_helix multiple antibiotic resistance protein
PCDDNCKO_02683 2e-30 gerE K Transcriptional regulator
PCDDNCKO_02684 2.4e-77 ybgC 3.1.2.23, 3.1.2.28 S thioesterase
PCDDNCKO_02685 1.3e-147 sdhB 1.3.5.1, 1.3.5.4 C succinate dehydrogenase
PCDDNCKO_02686 0.0 sdhA 1.3.5.1, 1.3.5.4 C succinate dehydrogenase
PCDDNCKO_02687 4.8e-108 sdhC C succinate dehydrogenase
PCDDNCKO_02688 1.2e-79 yslB S Protein of unknown function (DUF2507)
PCDDNCKO_02689 2.7e-214 lysC 1.1.1.3, 2.7.2.4 E Belongs to the aspartokinase family
PCDDNCKO_02690 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PCDDNCKO_02691 2.5e-52 trxA O Belongs to the thioredoxin family
PCDDNCKO_02692 3.3e-299 xsa 3.2.1.55 GH51 G Alpha-L-arabinofuranosidase C-terminus
PCDDNCKO_02693 3.5e-177 etfA C Electron transfer flavoprotein
PCDDNCKO_02694 5.7e-138 etfB C Electron transfer flavoprotein
PCDDNCKO_02695 2.4e-136 fadB 4.2.1.17 I Belongs to the enoyl-CoA hydratase isomerase family
PCDDNCKO_02696 9.2e-104 fadR K Transcriptional regulator
PCDDNCKO_02697 0.0 lcfA 6.2.1.3 IQ COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
PCDDNCKO_02698 5.5e-121 ywbB S Protein of unknown function (DUF2711)
PCDDNCKO_02699 4.7e-67 yshE S membrane
PCDDNCKO_02700 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PCDDNCKO_02701 0.0 polX L COG1796 DNA polymerase IV (family X)
PCDDNCKO_02702 2.3e-82 cvpA S membrane protein, required for colicin V production
PCDDNCKO_02703 9.1e-40 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PCDDNCKO_02704 1.9e-167 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PCDDNCKO_02705 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PCDDNCKO_02706 1e-195 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PCDDNCKO_02707 1.4e-133 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PCDDNCKO_02708 2e-32 sspI S Belongs to the SspI family
PCDDNCKO_02709 8.4e-204 ysfB KT regulator
PCDDNCKO_02710 3.7e-260 glcD 1.1.3.15 C FAD binding domain
PCDDNCKO_02711 2.4e-253 glcF C Glycolate oxidase
PCDDNCKO_02712 0.0 cstA T Carbon starvation protein
PCDDNCKO_02713 1.3e-300 abfA 3.2.1.55 GH51 G alpha-L-arabinofuranosidase activity
PCDDNCKO_02714 9.9e-144 araQ G transport system permease
PCDDNCKO_02715 2.9e-168 araP P PFAM binding-protein-dependent transport systems inner membrane component
PCDDNCKO_02716 1.7e-251 araN G carbohydrate transport
PCDDNCKO_02717 9.8e-222 egsA 1.1.1.261 I Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species
PCDDNCKO_02718 7.1e-142 araL 3.1.3.41 G Haloacid dehalogenase-like hydrolase
PCDDNCKO_02719 4.2e-132 araD 4.1.2.17, 4.2.1.109, 5.1.3.4 G COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
PCDDNCKO_02720 0.0 araB 2.7.1.16 C Belongs to the ribulokinase family
PCDDNCKO_02721 4e-297 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
PCDDNCKO_02722 2e-188 abnA 3.2.1.99 GH43 G Belongs to the glycosyl hydrolase 43 family
PCDDNCKO_02723 2.4e-206 ysdC G COG1363 Cellulase M and related proteins
PCDDNCKO_02724 1.7e-66 ysdB S Sigma-w pathway protein YsdB
PCDDNCKO_02725 5.9e-42 ysdA S Membrane
PCDDNCKO_02726 4.6e-58 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PCDDNCKO_02727 3.1e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PCDDNCKO_02728 1.5e-86 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PCDDNCKO_02729 3.8e-109 lrgB M Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgA, with the holin-like protein CidA. The LrgAB and CidA proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses
PCDDNCKO_02730 9.1e-40 lrgA S effector of murein hydrolase LrgA
PCDDNCKO_02731 1.9e-130 lytT T COG3279 Response regulator of the LytR AlgR family
PCDDNCKO_02732 0.0 lytS 2.7.13.3 T Histidine kinase
PCDDNCKO_02733 1e-150 ysaA S HAD-hyrolase-like
PCDDNCKO_02734 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PCDDNCKO_02735 1.5e-152 ytxC S YtxC-like family
PCDDNCKO_02736 6e-109 ytxB S SNARE associated Golgi protein
PCDDNCKO_02737 4.3e-172 dnaI L Primosomal protein DnaI
PCDDNCKO_02738 2.9e-257 dnaB L Membrane attachment protein
PCDDNCKO_02739 4.2e-80 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PCDDNCKO_02740 1.5e-67 speH 4.1.1.50 E Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
PCDDNCKO_02741 8.8e-195 gapB 1.2.1.12, 1.2.1.59 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PCDDNCKO_02742 2e-67 ytcD K Transcriptional regulator
PCDDNCKO_02743 4.5e-206 ytbD EGP Major facilitator Superfamily
PCDDNCKO_02744 7.6e-160 ytbE S reductase
PCDDNCKO_02745 6.4e-97 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PCDDNCKO_02746 9.5e-107 ytaF P Probably functions as a manganese efflux pump
PCDDNCKO_02747 1.2e-157 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PCDDNCKO_02748 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PCDDNCKO_02749 0.0 phoR 2.7.13.3 T Signal transduction histidine kinase
PCDDNCKO_02750 3.5e-129 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCDDNCKO_02751 3.6e-171 mdh 1.1.1.37 C Catalyzes the reversible oxidation of malate to oxaloacetate
PCDDNCKO_02752 9.1e-242 icd 1.1.1.42 C isocitrate
PCDDNCKO_02753 1.6e-210 citZ 2.3.3.1 C Belongs to the citrate synthase family
PCDDNCKO_02755 2.2e-199 S Aspartate phosphatase response regulator
PCDDNCKO_02756 7.1e-53
PCDDNCKO_02757 8.5e-48 yjdF S Protein of unknown function (DUF2992)
PCDDNCKO_02758 1.1e-72 yeaL S membrane
PCDDNCKO_02759 1.4e-193 ytvI S sporulation integral membrane protein YtvI
PCDDNCKO_02760 1.6e-64 fxsA S COG3030 Protein affecting phage T7 exclusion by the F plasmid
PCDDNCKO_02761 2.2e-294 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PCDDNCKO_02762 6.8e-181 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PCDDNCKO_02763 4e-181 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
PCDDNCKO_02764 1.3e-159 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PCDDNCKO_02765 9.8e-225 ytsJ 1.1.1.38 C Malate dehydrogenase
PCDDNCKO_02766 0.0 dnaE 2.7.7.7 L DNA polymerase
PCDDNCKO_02767 3.2e-56 ytrH S Sporulation protein YtrH
PCDDNCKO_02768 5.1e-87 ytrI
PCDDNCKO_02769 5.8e-23
PCDDNCKO_02770 2.7e-182 nrnA 3.1.13.3, 3.1.3.7 S COG0618 Exopolyphosphatase-related proteins
PCDDNCKO_02771 5.3e-47 ytpI S YtpI-like protein
PCDDNCKO_02772 2.8e-238 ytoI K transcriptional regulator containing CBS domains
PCDDNCKO_02773 1.1e-129 ytkL S Belongs to the UPF0173 family
PCDDNCKO_02774 2.9e-142 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PCDDNCKO_02776 9.2e-264 argH 4.3.2.1 E argininosuccinate lyase
PCDDNCKO_02777 2.5e-233 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PCDDNCKO_02778 2.1e-88 moaB 2.7.7.75 H May be involved in the biosynthesis of molybdopterin
PCDDNCKO_02779 4.9e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PCDDNCKO_02780 4.4e-183 ytxK 2.1.1.72 L DNA methylase
PCDDNCKO_02781 4.9e-90 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PCDDNCKO_02782 1.6e-60 ytfJ S Sporulation protein YtfJ
PCDDNCKO_02783 3.2e-108 ytfI S Protein of unknown function (DUF2953)
PCDDNCKO_02784 1.1e-86 yteJ S RDD family
PCDDNCKO_02785 6.4e-182 sppA OU signal peptide peptidase SppA
PCDDNCKO_02786 7e-147 nadK 2.7.1.23 G Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PCDDNCKO_02787 0.0 ytcJ S amidohydrolase
PCDDNCKO_02788 1.1e-305 acsA 6.2.1.1, 6.2.1.2 I COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
PCDDNCKO_02789 3.9e-31 sspB S spore protein
PCDDNCKO_02790 3.9e-226 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PCDDNCKO_02791 1.2e-208 iscS2 2.8.1.7 E Cysteine desulfurase
PCDDNCKO_02792 3.1e-240 braB E Component of the transport system for branched-chain amino acids
PCDDNCKO_02793 1.1e-261 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PCDDNCKO_02794 7.8e-154 hisK 3.1.3.15 E COG1387 Histidinol phosphatase and related hydrolases of the PHP family
PCDDNCKO_02795 7.7e-109 yttP K Transcriptional regulator
PCDDNCKO_02796 1.1e-86 ytsP 1.8.4.14 T GAF domain-containing protein
PCDDNCKO_02797 2e-279 ytrP 2.7.7.65 T COG2199 FOG GGDEF domain
PCDDNCKO_02798 2.5e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PCDDNCKO_02799 5e-262 ywdH 1.2.1.3 C Belongs to the aldehyde dehydrogenase family
PCDDNCKO_02800 7.6e-100 yokH G SMI1 / KNR4 family
PCDDNCKO_02801 1.4e-11 V endonuclease activity
PCDDNCKO_02804 3.8e-102
PCDDNCKO_02805 4.2e-33
PCDDNCKO_02806 6.4e-19 N PFAM YcfA family protein
PCDDNCKO_02807 7.3e-47 S HicB_like antitoxin of bacterial toxin-antitoxin system
PCDDNCKO_02808 3.6e-53 xpf K COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
PCDDNCKO_02809 1.5e-13 xpf K COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
PCDDNCKO_02811 6.9e-12
PCDDNCKO_02812 5.7e-222 hmp 1.14.12.17 C Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
PCDDNCKO_02813 7.3e-09
PCDDNCKO_02814 8.5e-90 yhbO 1.11.1.6, 3.5.1.124 S protease
PCDDNCKO_02816 2.1e-137 E GDSL-like Lipase/Acylhydrolase family
PCDDNCKO_02817 1.1e-150 fieF P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PCDDNCKO_02818 4.4e-149 K Transcriptional regulator
PCDDNCKO_02819 7.6e-124 azlC E AzlC protein
PCDDNCKO_02820 8.7e-48 azlD S Branched-chain amino acid transport protein (AzlD)
PCDDNCKO_02821 5.5e-239 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PCDDNCKO_02822 0.0 acsA 6.2.1.1 I COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
PCDDNCKO_02823 8.9e-121 acuA K Part of the acuABC operon, which is possibly involved in the breakdown of acetoin and butanediol. Acts as an acetyltransferase inactivating acetyl-CoA synthetase AcsA via acetylation at a Lys residue
PCDDNCKO_02824 2.7e-117 acuB S Domain in cystathionine beta-synthase and other proteins.
PCDDNCKO_02825 5.6e-230 acuC BQ histone deacetylase
PCDDNCKO_02826 3.7e-120 motS N Flagellar motor protein
PCDDNCKO_02827 5.1e-145 motA N flagellar motor
PCDDNCKO_02828 6.4e-182 ccpA K catabolite control protein A
PCDDNCKO_02829 1.9e-195 aroF 2.5.1.54, 5.4.99.5 E Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate
PCDDNCKO_02830 1.7e-43 ytxJ O Protein of unknown function (DUF2847)
PCDDNCKO_02831 1.7e-16 ytxH S COG4980 Gas vesicle protein
PCDDNCKO_02832 1.7e-14 ytxG S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PCDDNCKO_02833 1.4e-250 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PCDDNCKO_02834 0.0 sftA D Belongs to the FtsK SpoIIIE SftA family
PCDDNCKO_02835 1.1e-107 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PCDDNCKO_02836 3.7e-148 ytpQ S Belongs to the UPF0354 family
PCDDNCKO_02837 2.1e-57 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PCDDNCKO_02838 1.7e-78 ytoQ S Nucleoside 2-deoxyribosyltransferase YtoQ
PCDDNCKO_02839 6.4e-204 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
PCDDNCKO_02840 1.7e-51 ytzB S small secreted protein
PCDDNCKO_02841 0.0 sfcA 1.1.1.38 C Malate dehydrogenase
PCDDNCKO_02842 5.6e-163 ytnP S COG0491 Zn-dependent hydrolases, including glyoxylases
PCDDNCKO_02843 8e-125 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PCDDNCKO_02844 3.5e-45 ytzH S YtzH-like protein
PCDDNCKO_02845 6.3e-156 ytmP 2.7.1.89 M Phosphotransferase
PCDDNCKO_02846 1.2e-177 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PCDDNCKO_02847 2.2e-168 ytlQ
PCDDNCKO_02848 1.8e-101 ligT 3.1.4.58, 3.5.1.42 J Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
PCDDNCKO_02849 1.3e-173 ytkP 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PCDDNCKO_02850 5.6e-269 pepV 3.5.1.18 E Dipeptidase
PCDDNCKO_02851 5.9e-228 pbuO S permease
PCDDNCKO_02852 1.2e-216 ythQ U Bacterial ABC transporter protein EcsB
PCDDNCKO_02853 4.1e-127 ythP V ABC transporter
PCDDNCKO_02854 2.4e-33 ytzE K COG1349 Transcriptional regulators of sugar metabolism
PCDDNCKO_02855 1.7e-131 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PCDDNCKO_02856 6.6e-293 ytgP S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PCDDNCKO_02857 3.3e-236 ytfP S HI0933-like protein
PCDDNCKO_02858 9.8e-283 opuD M Belongs to the BCCT transporter (TC 2.A.15) family
PCDDNCKO_02859 9e-26 yteV S Sporulation protein Cse60
PCDDNCKO_02860 7.5e-186 msmR K Transcriptional regulator
PCDDNCKO_02861 4.7e-246 msmE G Bacterial extracellular solute-binding protein
PCDDNCKO_02862 2.2e-168 amyD G Binding-protein-dependent transport system inner membrane component
PCDDNCKO_02863 1.2e-141 amyC P ABC transporter (permease)
PCDDNCKO_02864 4.9e-251 melA 3.2.1.122, 3.2.1.22, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase
PCDDNCKO_02865 1.6e-85 M Acetyltransferase (GNAT) domain
PCDDNCKO_02866 1.3e-51 ytwF P Sulfurtransferase
PCDDNCKO_02867 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PCDDNCKO_02868 1.2e-52 ytvB S Protein of unknown function (DUF4257)
PCDDNCKO_02869 8e-138 pfyP T Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PCDDNCKO_02870 3e-207 yttB EGP Major facilitator Superfamily
PCDDNCKO_02871 5.2e-125 ywaF S Integral membrane protein
PCDDNCKO_02872 0.0 bceB V ABC transporter (permease)
PCDDNCKO_02873 1.7e-134 bceA V ABC transporter, ATP-binding protein
PCDDNCKO_02874 2.8e-166 T PhoQ Sensor
PCDDNCKO_02875 9.7e-129 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCDDNCKO_02876 1.9e-218 ytrF V COG0577 ABC-type antimicrobial peptide transport system, permease component
PCDDNCKO_02877 2.9e-125 ytrE V ABC transporter, ATP-binding protein
PCDDNCKO_02878 1.1e-157
PCDDNCKO_02879 3.5e-164 P ABC-2 family transporter protein
PCDDNCKO_02880 4.2e-170 S ABC-2 family transporter protein
PCDDNCKO_02881 1.2e-160 ytrB P abc transporter atp-binding protein
PCDDNCKO_02882 8.6e-66 ytrA K GntR family transcriptional regulator
PCDDNCKO_02883 7.4e-40 ytzC S Protein of unknown function (DUF2524)
PCDDNCKO_02884 7.8e-189 K helix_turn_helix, Arsenical Resistance Operon Repressor
PCDDNCKO_02885 8.2e-283 norB EGP COG0477 Permeases of the major facilitator superfamily
PCDDNCKO_02886 1.4e-189 yhcC S Fe-S oxidoreductase
PCDDNCKO_02887 1.9e-106 ytqB J Putative rRNA methylase
PCDDNCKO_02889 1.8e-142 glpQ 3.1.4.46, 5.4.2.11 C glycerophosphoryl diester phosphodiesterase
PCDDNCKO_02890 6e-210 ytpB 4.2.3.130 S Tetraprenyl-beta-curcumene synthase
PCDDNCKO_02891 2.9e-150 ytpA 3.1.1.5 I Alpha beta hydrolase
PCDDNCKO_02892 1.9e-57 ytoA S COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
PCDDNCKO_02893 7.4e-261 ytnA E COG1113 Gamma-aminobutyrate permease and related permeases
PCDDNCKO_02894 0.0 asnB 6.3.5.4 E Asparagine synthase
PCDDNCKO_02895 1.5e-225 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PCDDNCKO_02896 6.3e-309 pckA 4.1.1.49 C Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
PCDDNCKO_02897 1.6e-38 ytmB S Protein of unknown function (DUF2584)
PCDDNCKO_02898 1e-147 ytmA E COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases
PCDDNCKO_02899 8.1e-185 ytlA P COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components
PCDDNCKO_02900 3.2e-144 ytlC P ABC transporter
PCDDNCKO_02901 8.1e-127 ytlD P COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
PCDDNCKO_02902 9.8e-88 ytkD 3.6.1.55 L Belongs to the Nudix hydrolase family
PCDDNCKO_02903 1.7e-61 ytkC S Bacteriophage holin family
PCDDNCKO_02904 1.6e-76 dps P Belongs to the Dps family
PCDDNCKO_02906 3.6e-76 ytkA S YtkA-like
PCDDNCKO_02907 5.7e-88 luxS 4.4.1.21 T Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PCDDNCKO_02908 6.2e-40 yidD S Could be involved in insertion of integral membrane proteins into the membrane
PCDDNCKO_02909 3.6e-105 ytiB 4.2.1.1 P Reversible hydration of carbon dioxide
PCDDNCKO_02910 7.9e-41 rpmE2 J Ribosomal protein L31
PCDDNCKO_02911 2.6e-239 cydA 1.10.3.14 C oxidase, subunit
PCDDNCKO_02912 5.8e-186 cydB 1.10.3.14 C COG1294 Cytochrome bd-type quinol oxidase, subunit 2
PCDDNCKO_02913 2.3e-24 S Domain of Unknown Function (DUF1540)
PCDDNCKO_02914 2.4e-124 troD P 'COG1108 ABC-type Mn2 Zn2 transport systems, permease components'
PCDDNCKO_02915 2e-159 mntC P COG1108 ABC-type Mn2 Zn2 transport systems, permease components
PCDDNCKO_02916 3.3e-122 mntB P 'COG1121 ABC-type Mn Zn transport systems, ATPase component'
PCDDNCKO_02917 4.4e-122 troA P Belongs to the bacterial solute-binding protein 9 family
PCDDNCKO_02918 9.2e-214 menC 4.2.1.113 H Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)
PCDDNCKO_02919 9.4e-275 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
PCDDNCKO_02920 2.1e-154 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PCDDNCKO_02921 7.9e-154 menH 4.2.99.20 S Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC)
PCDDNCKO_02922 0.0 menD 2.2.1.9 H Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
PCDDNCKO_02923 4.2e-272 menF 5.4.4.2 HQ Isochorismate synthase
PCDDNCKO_02924 1.8e-130 dksA T COG1734 DnaK suppressor protein
PCDDNCKO_02925 1.7e-76 tspO T membrane
PCDDNCKO_02934 7.8e-08
PCDDNCKO_02935 1.3e-09
PCDDNCKO_02942 1.6e-08
PCDDNCKO_02947 3.4e-39 S COG NOG14552 non supervised orthologous group
PCDDNCKO_02948 9.7e-98 thiT S Thiamine transporter protein (Thia_YuaJ)
PCDDNCKO_02949 4.5e-179 yuaG 3.4.21.72 S protein conserved in bacteria
PCDDNCKO_02950 5.2e-82 yuaF OU Membrane protein implicated in regulation of membrane protease activity
PCDDNCKO_02951 7.6e-80 yuaE S DinB superfamily
PCDDNCKO_02952 6e-108 yuaD S MOSC domain
PCDDNCKO_02953 1.6e-227 gbsB 1.1.1.1 C alcohol dehydrogenase
PCDDNCKO_02954 5.5e-283 gbsA 1.2.1.8 C Belongs to the aldehyde dehydrogenase family
PCDDNCKO_02955 1.5e-95 yuaC K Belongs to the GbsR family
PCDDNCKO_02956 1.1e-92 yuaB
PCDDNCKO_02957 5.5e-121 ktrA P COG0569 K transport systems, NAD-binding component
PCDDNCKO_02958 4.8e-146 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PCDDNCKO_02959 6.5e-218 hmp 1.14.12.17 C Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
PCDDNCKO_02960 1.8e-121 G Cupin
PCDDNCKO_02961 3.7e-51 yjcN
PCDDNCKO_02963 2.3e-145 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PCDDNCKO_02964 4.9e-194 yubA S transporter activity
PCDDNCKO_02965 2.1e-185 ygjR S Oxidoreductase
PCDDNCKO_02966 1.5e-97 pfpI 1.11.1.6, 3.5.1.124 S DJ-1/PfpI family
PCDDNCKO_02967 6.2e-237 mcpA NT chemotaxis protein
PCDDNCKO_02968 3.9e-223 mcpA NT chemotaxis protein
PCDDNCKO_02969 1.2e-235 mcpA NT chemotaxis protein
PCDDNCKO_02970 1.8e-220 mcpA NT chemotaxis protein
PCDDNCKO_02971 2.2e-139 tgl 2.3.2.13 S protein-glutamine gamma-glutamyltransferase activity
PCDDNCKO_02972 1.8e-40
PCDDNCKO_02973 3.8e-190 yrpB 1.13.12.16 S COG2070 Dioxygenases related to 2-nitropropane dioxygenase
PCDDNCKO_02974 4.5e-24 yugU S Uncharacterised protein family UPF0047
PCDDNCKO_02975 1.6e-39 yugU S Uncharacterised protein family UPF0047
PCDDNCKO_02976 0.0 yugT 3.2.1.10, 3.2.1.20 GH13,GH31 G COG0366 Glycosidases
PCDDNCKO_02977 3e-232 yugS S COG1253 Hemolysins and related proteins containing CBS domains
PCDDNCKO_02978 8.3e-117 yugP S Zn-dependent protease
PCDDNCKO_02979 1e-17
PCDDNCKO_02980 6.7e-27 mstX S Membrane-integrating protein Mistic
PCDDNCKO_02981 1.6e-180 yugO P COG1226 Kef-type K transport systems
PCDDNCKO_02982 2.4e-71 yugN S YugN-like family
PCDDNCKO_02984 8.7e-259 pgi 5.3.1.9 G Belongs to the GPI family
PCDDNCKO_02985 5.7e-95 S NADPH-dependent FMN reductase
PCDDNCKO_02986 1.4e-118 ycaC Q Isochorismatase family
PCDDNCKO_02987 7.4e-230 yugK C Dehydrogenase
PCDDNCKO_02988 2.4e-225 yugJ C oxidoreductases, Fe-dependent alcohol dehydrogenase family
PCDDNCKO_02989 1.8e-34 yuzA S Domain of unknown function (DUF378)
PCDDNCKO_02990 6e-59 yugI 5.3.1.9 J RNA binding protein (contains ribosomal protein S1 domain)
PCDDNCKO_02991 2.1e-208 yugH 2.6.1.1 E Aminotransferase
PCDDNCKO_02992 2e-83 alaR K Transcriptional regulator
PCDDNCKO_02993 4.2e-155 yugF I Hydrolase
PCDDNCKO_02994 4.6e-39 yugE S Domain of unknown function (DUF1871)
PCDDNCKO_02995 1.2e-224 patB 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PCDDNCKO_02996 8.1e-230 T PhoQ Sensor
PCDDNCKO_02997 3.4e-67 kapB G Kinase associated protein B
PCDDNCKO_02998 4e-118 kapD L the KinA pathway to sporulation
PCDDNCKO_02999 2e-185 yuxJ EGP Major facilitator Superfamily
PCDDNCKO_03000 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Penicillin-binding Protein
PCDDNCKO_03001 5e-72 yuxK S protein conserved in bacteria
PCDDNCKO_03002 9.3e-74 yufK S Family of unknown function (DUF5366)
PCDDNCKO_03003 6.4e-293 dcuS 2.7.13.3 T Signal transduction histidine kinase regulating citrate malate metabolism
PCDDNCKO_03004 2.7e-126 dcuR T COG4565 Response regulator of citrate malate metabolism
PCDDNCKO_03005 2.4e-195 tcsA S ABC-type transport system, periplasmic component surface lipoprotein
PCDDNCKO_03006 1.1e-286 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
PCDDNCKO_03007 6.5e-185 yufP S Belongs to the binding-protein-dependent transport system permease family
PCDDNCKO_03008 3.5e-169 yufQ S Belongs to the binding-protein-dependent transport system permease family
PCDDNCKO_03009 6.2e-13
PCDDNCKO_03010 0.0 phaA 1.6.5.3 CP COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit
PCDDNCKO_03011 9.2e-69 mrpB P Subunit B of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PCDDNCKO_03012 8.9e-51 phaC 1.6.5.3 P Subunit C of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PCDDNCKO_03013 2.4e-262 mrpD CP Subunit D of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PCDDNCKO_03014 1.3e-76 mrpE P Subunit E of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PCDDNCKO_03015 1.5e-38 phaF P Subunit F of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PCDDNCKO_03016 1.1e-59 phaG P COG1320 Multisubunit Na H antiporter, MnhG subunit
PCDDNCKO_03017 1.6e-64 ydiI Q protein, possibly involved in aromatic compounds catabolism
PCDDNCKO_03018 3.4e-112 comA K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PCDDNCKO_03019 3.9e-275 comP 2.7.13.3 T Histidine kinase
PCDDNCKO_03021 1.2e-97 comQ H Belongs to the FPP GGPP synthase family
PCDDNCKO_03023 1.2e-52 yuzC
PCDDNCKO_03024 4.5e-230 yuxH 3.1.4.52 T signal transduction protein containing EAL and modified HD-GYP domains
PCDDNCKO_03025 2.5e-283 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PCDDNCKO_03026 1.1e-103 pncA Q COG1335 Amidases related to nicotinamidase
PCDDNCKO_03027 7.2e-68 yueI S Protein of unknown function (DUF1694)
PCDDNCKO_03028 2.8e-38 yueH S YueH-like protein
PCDDNCKO_03029 6.4e-34 yueG S Spore germination protein gerPA/gerPF
PCDDNCKO_03030 5.6e-187 yueF S transporter activity
PCDDNCKO_03031 3.5e-22 S Protein of unknown function (DUF2642)
PCDDNCKO_03032 3.7e-96 yueE S phosphohydrolase
PCDDNCKO_03033 4.9e-131 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PCDDNCKO_03034 6.5e-76 yueC S Family of unknown function (DUF5383)
PCDDNCKO_03035 0.0 esaA S type VII secretion protein EsaA
PCDDNCKO_03036 0.0 essC D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
PCDDNCKO_03037 2.8e-206 essB S WXG100 protein secretion system (Wss), protein YukC
PCDDNCKO_03038 1.5e-39 yukD S WXG100 protein secretion system (Wss), protein YukD
PCDDNCKO_03039 3.3e-46 esxA S Belongs to the WXG100 family
PCDDNCKO_03040 3.2e-228 yukF QT Transcriptional regulator
PCDDNCKO_03041 2.3e-204 ald 1.4.1.1 E Belongs to the AlaDH PNT family
PCDDNCKO_03042 2.8e-133 yukJ S Uncharacterized conserved protein (DUF2278)
PCDDNCKO_03043 4.8e-34 mbtH S MbtH-like protein
PCDDNCKO_03044 0.0 dhbF Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PCDDNCKO_03045 1.7e-173 entB 3.3.2.1, 6.3.2.14 Q Isochorismatase family
PCDDNCKO_03046 0.0 entE 2.7.7.58, 6.3.2.14 Q 2,3-dihydroxybenzoate-AMP ligase
PCDDNCKO_03047 4e-223 entC 5.4.4.2 HQ Isochorismate synthase
PCDDNCKO_03048 1e-134 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PCDDNCKO_03049 6.2e-165 besA S Putative esterase
PCDDNCKO_03050 1.1e-120 yuiH S Oxidoreductase molybdopterin binding domain
PCDDNCKO_03051 7.3e-101 bioY S Biotin biosynthesis protein
PCDDNCKO_03052 2.4e-208 yuiF S antiporter
PCDDNCKO_03053 4e-281 pepA 3.4.11.1, 3.4.11.5 E Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
PCDDNCKO_03054 1.2e-77 yuiD S protein conserved in bacteria
PCDDNCKO_03055 7.1e-118 yuiC S protein conserved in bacteria
PCDDNCKO_03056 9.9e-28 yuiB S Putative membrane protein
PCDDNCKO_03057 7.2e-236 yumB 1.6.99.3 C NADH dehydrogenase
PCDDNCKO_03058 1.5e-186 yumC 1.18.1.2, 1.19.1.1 C reductase
PCDDNCKO_03060 4.6e-185 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PCDDNCKO_03061 4.8e-29
PCDDNCKO_03062 2.9e-69 CP Membrane
PCDDNCKO_03063 1.8e-122 V ABC transporter
PCDDNCKO_03065 2.9e-33 S Bacteriocin class IId cyclical uberolysin-like
PCDDNCKO_03067 1.8e-93 rimJ 2.3.1.128 J Alanine acetyltransferase
PCDDNCKO_03068 1.3e-137 dltE M Belongs to the short-chain dehydrogenases reductases (SDR) family
PCDDNCKO_03069 1.1e-62 erpA S Belongs to the HesB IscA family
PCDDNCKO_03070 1.6e-162 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PCDDNCKO_03071 5e-213 yutK F Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PCDDNCKO_03072 2.4e-39 yuzB S Belongs to the UPF0349 family
PCDDNCKO_03073 2.7e-207 yutJ 1.6.99.3 C NADH dehydrogenase
PCDDNCKO_03074 9.7e-55 yuzD S protein conserved in bacteria
PCDDNCKO_03075 1.2e-35 yutI O COG0694 Thioredoxin-like proteins and domains
PCDDNCKO_03076 0.0 yuxL 3.4.14.5, 3.4.19.1 EU peptidase
PCDDNCKO_03077 2.6e-169 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PCDDNCKO_03078 2.2e-196 thrC 4.2.3.1 E Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
PCDDNCKO_03079 1e-240 hom 1.1.1.3 E homoserine dehydrogenase
PCDDNCKO_03080 1.2e-196 yutH S Spore coat protein
PCDDNCKO_03081 7.9e-87 pgpA 3.1.3.27 I COG1267 Phosphatidylglycerophosphatase A and related proteins
PCDDNCKO_03082 1.6e-140 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PCDDNCKO_03083 1.4e-72 yutE S Protein of unknown function DUF86
PCDDNCKO_03084 1.7e-47 yutD S protein conserved in bacteria
PCDDNCKO_03085 8e-168 lipA 2.8.1.8 H Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
PCDDNCKO_03086 3.2e-194 lytH M Peptidase, M23
PCDDNCKO_03087 1.8e-128 yunB S Sporulation protein YunB (Spo_YunB)
PCDDNCKO_03088 5.3e-267 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PCDDNCKO_03089 1.8e-145 yunE S membrane transporter protein
PCDDNCKO_03090 6.9e-169 yunF S Protein of unknown function DUF72
PCDDNCKO_03091 7.5e-61 3.1.3.18, 3.8.1.2 S phosphoglycolate phosphatase activity
PCDDNCKO_03092 1e-262 allB 3.5.2.5 F Catalyzes the conversion of allantoin (5- ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring
PCDDNCKO_03093 2e-302 pucR QT COG2508 Regulator of polyketide synthase expression
PCDDNCKO_03096 2.7e-128 S Aspartate phosphatase response regulator
PCDDNCKO_03097 1.4e-68
PCDDNCKO_03098 3.8e-213 blt EGP Major facilitator Superfamily
PCDDNCKO_03099 1.1e-236 pucG 2.6.1.112, 2.6.1.44, 2.6.1.45, 2.6.1.51 E COG0075 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase
PCDDNCKO_03100 8.1e-235 pucF 3.5.1.6, 3.5.1.87, 3.5.3.9 E COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases
PCDDNCKO_03101 4.1e-169 bsn L Ribonuclease
PCDDNCKO_03102 1.6e-205 msmX P Belongs to the ABC transporter superfamily
PCDDNCKO_03103 1.4e-133 yurK K UTRA
PCDDNCKO_03104 1.1e-161 yurL 2.7.1.218 G pfkB family carbohydrate kinase
PCDDNCKO_03105 1.4e-164 yurM P COG0395 ABC-type sugar transport system, permease component
PCDDNCKO_03106 1.2e-158 yurN G Binding-protein-dependent transport system inner membrane component
PCDDNCKO_03107 3.1e-245 yurO G COG1653 ABC-type sugar transport system, periplasmic component
PCDDNCKO_03108 6.7e-184 frlB M Catalyzes the conversion of a range of fructosamine 6- phosphates to glucose 6-phosphate and a free amino acid
PCDDNCKO_03109 5.6e-164 K helix_turn_helix, mercury resistance
PCDDNCKO_03110 4e-14
PCDDNCKO_03111 3.4e-76
PCDDNCKO_03112 2.1e-22 S Sporulation delaying protein SdpA
PCDDNCKO_03114 3.1e-65 yurQ 2.7.7.7 L COG0322 Nuclease subunit of the excinuclease complex
PCDDNCKO_03115 6.6e-204 yurR 1.4.5.1 E COG0665 Glycine D-amino acid oxidases (deaminating)
PCDDNCKO_03116 1.2e-33
PCDDNCKO_03117 2.1e-24
PCDDNCKO_03118 5.9e-157 csn 3.2.1.132 M Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan
PCDDNCKO_03119 3e-270 sufB O FeS cluster assembly
PCDDNCKO_03120 8.5e-78 nifU C COG0822 NifU homolog involved in Fe-S cluster formation
PCDDNCKO_03121 4.6e-235 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PCDDNCKO_03122 1.2e-244 sufD O assembly protein SufD
PCDDNCKO_03123 2.3e-142 sufC O COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component
PCDDNCKO_03124 7.6e-64 yurZ 2.3.1.12, 4.1.1.44 S Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
PCDDNCKO_03125 1.1e-144 metQ P Belongs to the NlpA lipoprotein family
PCDDNCKO_03126 1.8e-95 metI P COG2011 ABC-type metal ion transport system, permease component
PCDDNCKO_03127 4.8e-185 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PCDDNCKO_03128 5e-57 yusD S SCP-2 sterol transfer family
PCDDNCKO_03129 1.6e-54 yusE CO Thioredoxin
PCDDNCKO_03130 2.2e-63 rnmV 3.1.26.8 L COG1658 Small primase-like proteins (Toprim domain)
PCDDNCKO_03131 3.7e-40 yusG S Protein of unknown function (DUF2553)
PCDDNCKO_03132 9.3e-65 gcvH E Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate
PCDDNCKO_03133 2.1e-63 arsC 1.20.4.1 P Belongs to the ArsC family
PCDDNCKO_03134 0.0 fadE 1.3.8.1 I acyl-CoA dehydrogenase
PCDDNCKO_03135 4.2e-217 fadA 2.3.1.16 I Belongs to the thiolase family
PCDDNCKO_03136 0.0 fadB 1.1.1.35, 4.2.1.17, 5.1.2.3 I 3-hydroxyacyl-CoA dehydrogenase
PCDDNCKO_03137 4e-167 fadM E Proline dehydrogenase
PCDDNCKO_03138 3.9e-43
PCDDNCKO_03139 4.2e-53 yusN M Coat F domain
PCDDNCKO_03140 3.7e-68 yusO K Iron dependent repressor, N-terminal DNA binding domain
PCDDNCKO_03141 8.1e-288 yusP P Major facilitator superfamily
PCDDNCKO_03142 1.4e-156 ywbI2 K Transcriptional regulator
PCDDNCKO_03143 3.6e-137 adc 4.1.1.4 Q Acetoacetate decarboxylase (ADC)
PCDDNCKO_03144 3.3e-189 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PCDDNCKO_03145 4.3e-39 yusU S Protein of unknown function (DUF2573)
PCDDNCKO_03146 3.1e-150 yusV 3.6.3.34 HP ABC transporter
PCDDNCKO_03147 1.2e-44 S YusW-like protein
PCDDNCKO_03148 0.0 pepF2 E COG1164 Oligoendopeptidase F
PCDDNCKO_03149 5.4e-150 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PCDDNCKO_03150 1.6e-79 dps P Belongs to the Dps family
PCDDNCKO_03151 2.5e-237 htrA 3.4.21.107 O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PCDDNCKO_03152 3.7e-125 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCDDNCKO_03153 2e-250 cssS 2.7.13.3 T PhoQ Sensor
PCDDNCKO_03154 1.3e-23
PCDDNCKO_03155 3.6e-157 yuxN K Transcriptional regulator
PCDDNCKO_03156 1.5e-261 fumC 1.1.1.38, 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PCDDNCKO_03157 6.6e-24 S Protein of unknown function (DUF3970)
PCDDNCKO_03158 2.3e-257 gerAA EG Spore germination protein
PCDDNCKO_03159 6.6e-188 gerAB E Spore germination protein
PCDDNCKO_03160 6.4e-207 gerAC S Spore germination B3/ GerAC like, C-terminal
PCDDNCKO_03161 9.5e-107 vraR KT COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PCDDNCKO_03162 4.3e-192 vraS 2.7.13.3 T Histidine kinase
PCDDNCKO_03163 4.3e-127 yvqF S Cell wall-active antibiotics response 4TMS YvqF
PCDDNCKO_03164 1.4e-140 liaG S Putative adhesin
PCDDNCKO_03165 2.9e-93 liaH KT COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription
PCDDNCKO_03166 3.3e-46 liaI S membrane
PCDDNCKO_03167 2.8e-227 yvqJ EGP Major facilitator Superfamily
PCDDNCKO_03168 8.3e-102 yvqK 2.5.1.17 S Adenosyltransferase
PCDDNCKO_03169 1.3e-224 yvrA 3.6.3.34 HP COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
PCDDNCKO_03170 5.3e-179 btuC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PCDDNCKO_03171 1.1e-167 yvrC P ABC transporter substrate-binding protein
PCDDNCKO_03172 3.1e-139 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PCDDNCKO_03173 4.5e-171 yvrE G SMP-30/Gluconolaconase/LRE-like region
PCDDNCKO_03174 0.0 T PhoQ Sensor
PCDDNCKO_03175 6.7e-133 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCDDNCKO_03176 7.3e-36
PCDDNCKO_03177 2.1e-100 yvrI K RNA polymerase
PCDDNCKO_03178 1.2e-15 S YvrJ protein family
PCDDNCKO_03179 9.2e-233 oxdC 4.1.1.2 G Oxalate decarboxylase
PCDDNCKO_03180 7.1e-66 yvrL S Regulatory protein YrvL
PCDDNCKO_03181 3.1e-147 fhuC 3.6.3.34 HP ABC transporter
PCDDNCKO_03182 1.4e-176 fhuG P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PCDDNCKO_03183 6.6e-185 fhuB P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PCDDNCKO_03184 8.9e-178 fhuD P ABC transporter
PCDDNCKO_03185 3.3e-124 Q Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
PCDDNCKO_03186 2.9e-236 yvsH E Arginine ornithine antiporter
PCDDNCKO_03187 6.1e-14 S Small spore protein J (Spore_SspJ)
PCDDNCKO_03188 1.3e-84 yvsG S LexA-binding, inner membrane-associated putative hydrolase
PCDDNCKO_03189 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
PCDDNCKO_03190 4.5e-166 yvgK P COG1910 Periplasmic molybdate-binding protein domain
PCDDNCKO_03191 3.1e-139 modA P COG0725 ABC-type molybdate transport system, periplasmic component
PCDDNCKO_03192 2.3e-94 modB P COG4149 ABC-type molybdate transport system, permease component
PCDDNCKO_03193 2e-112 yfiK K Regulator
PCDDNCKO_03194 1.9e-179 T Histidine kinase
PCDDNCKO_03195 8.1e-171 yfiL V COG1131 ABC-type multidrug transport system, ATPase component
PCDDNCKO_03196 6.3e-191 yfiM V ABC-2 type transporter
PCDDNCKO_03197 4e-196 yfiN V COG0842 ABC-type multidrug transport system, permease component
PCDDNCKO_03198 5e-156 yvgN S reductase
PCDDNCKO_03199 3.2e-86 yvgO
PCDDNCKO_03200 0.0 yjcE P COG0025 NhaP-type Na H and K H antiporters
PCDDNCKO_03201 0.0 cysI 1.7.7.1, 1.8.1.2, 1.8.7.1 P Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate
PCDDNCKO_03202 0.0 cysJ 1.8.1.2 P Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
PCDDNCKO_03203 0.0 helD 3.6.4.12 L DNA helicase
PCDDNCKO_03204 2.4e-38 yvgT S membrane
PCDDNCKO_03205 7.3e-42 yvgT S membrane
PCDDNCKO_03206 7.5e-141 S Metallo-peptidase family M12
PCDDNCKO_03207 5.6e-71 bdbC O Required for disulfide bond formation in some proteins
PCDDNCKO_03208 5.7e-102 bdbD O Thioredoxin
PCDDNCKO_03209 0.0 cadA 3.6.3.3, 3.6.3.5 P COG2217 Cation transport ATPase
PCDDNCKO_03210 0.0 copA 3.6.3.54 P P-type ATPase
PCDDNCKO_03211 2.6e-29 copZ P Heavy-metal-associated domain
PCDDNCKO_03212 1.4e-47 csoR S transcriptional
PCDDNCKO_03213 5.2e-195 yvaA 1.1.1.371 S Oxidoreductase
PCDDNCKO_03214 1.1e-118 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PCDDNCKO_03215 8.3e-254 moxC C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PCDDNCKO_03216 2.1e-45 ytnI O COG0695 Glutaredoxin and related proteins
PCDDNCKO_03217 6.4e-182 ytmO C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PCDDNCKO_03218 1.8e-139 tcyN 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
PCDDNCKO_03219 1.9e-119 tcyM U Binding-protein-dependent transport system inner membrane component
PCDDNCKO_03220 5.9e-121 tcyL P Binding-protein-dependent transport system inner membrane component
PCDDNCKO_03221 2.7e-146 tcyK M Bacterial periplasmic substrate-binding proteins
PCDDNCKO_03222 4.2e-131 ytmJ ET Bacterial periplasmic substrate-binding proteins
PCDDNCKO_03223 3e-101 ytmI K Acetyltransferase (GNAT) domain
PCDDNCKO_03224 2.1e-160 ytlI K LysR substrate binding domain
PCDDNCKO_03225 2e-138 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PCDDNCKO_03226 8.2e-48 yrdF K ribonuclease inhibitor
PCDDNCKO_03227 3.2e-44 yrdF K ribonuclease inhibitor
PCDDNCKO_03229 1.6e-82 smpB O Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
PCDDNCKO_03230 0.0 rnr K 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PCDDNCKO_03231 7.4e-143 est 3.1.1.1 S Carboxylesterase
PCDDNCKO_03232 4.8e-24 secG U Preprotein translocase subunit SecG
PCDDNCKO_03233 6e-35 yvzC K Transcriptional
PCDDNCKO_03234 1.8e-69 K transcriptional
PCDDNCKO_03235 1e-72 yvaO K Cro/C1-type HTH DNA-binding domain
PCDDNCKO_03236 4.4e-52 yodB K transcriptional
PCDDNCKO_03237 1.9e-256 T His Kinase A (phosphoacceptor) domain
PCDDNCKO_03238 5.4e-121 K Transcriptional regulatory protein, C terminal
PCDDNCKO_03239 8.2e-137 mutG S ABC-2 family transporter protein
PCDDNCKO_03240 3.5e-121 spaE S ABC-2 family transporter protein
PCDDNCKO_03241 1.8e-125 mutF V ABC transporter, ATP-binding protein
PCDDNCKO_03242 4.7e-112 opuCD P COG1174 ABC-type proline glycine betaine transport systems, permease component
PCDDNCKO_03243 5e-173 opuCC M COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PCDDNCKO_03244 1.2e-112 opuCB P COG1174 ABC-type proline glycine betaine transport systems, permease component
PCDDNCKO_03245 1.4e-209 opuCA 3.6.3.32 E COG1125 ABC-type proline glycine betaine transport systems, ATPase components
PCDDNCKO_03246 4.3e-76 yvbF K Belongs to the GbsR family
PCDDNCKO_03247 2.8e-109 opuCD P COG1174 ABC-type proline glycine betaine transport systems, permease component
PCDDNCKO_03248 1e-170 opuCC M COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PCDDNCKO_03249 4.5e-112 opuCB P COG1174 ABC-type proline glycine betaine transport systems, permease component
PCDDNCKO_03250 3.3e-211 opuCA 3.6.3.32 E COG1125 ABC-type proline glycine betaine transport systems, ATPase components
PCDDNCKO_03251 7.1e-98 yvbF K Belongs to the GbsR family
PCDDNCKO_03252 4.9e-100 yvbG U UPF0056 membrane protein
PCDDNCKO_03253 7.6e-121 exoY M Membrane
PCDDNCKO_03254 0.0 tcaA S response to antibiotic
PCDDNCKO_03255 8.9e-70 yvbK 3.1.3.25 K acetyltransferase
PCDDNCKO_03256 6.4e-243 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PCDDNCKO_03257 7.5e-299 gpmI 5.4.2.12 G Catalyzes the interconversion of 2-phosphoglycerate and
PCDDNCKO_03258 6.6e-139 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PCDDNCKO_03259 7.2e-217 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PCDDNCKO_03260 2.1e-185 gapA 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PCDDNCKO_03261 2.3e-187 cggR K COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
PCDDNCKO_03263 7.4e-253 araE EGP Major facilitator Superfamily
PCDDNCKO_03264 2.9e-204 araR K transcriptional
PCDDNCKO_03265 5.4e-189 yvbT C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PCDDNCKO_03266 1.6e-123 yvbU K Transcriptional regulator
PCDDNCKO_03267 7.7e-158 yvbV EG EamA-like transporter family
PCDDNCKO_03268 8.5e-214 yvbW E COG1113 Gamma-aminobutyrate permease and related permeases
PCDDNCKO_03270 6.5e-151 ybbH_1 K RpiR family transcriptional regulator
PCDDNCKO_03271 2.7e-296 gntK 2.7.1.12, 2.7.1.17, 2.7.1.189 G Belongs to the FGGY kinase family
PCDDNCKO_03272 3.1e-224 gntP EG COG2610 H gluconate symporter and related permeases
PCDDNCKO_03274 1.6e-07 S leucine-zipper of insertion element IS481
PCDDNCKO_03275 3.9e-133 lutC S Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
PCDDNCKO_03276 1.6e-271 lutB C Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate
PCDDNCKO_03277 9.3e-135 lutA C Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
PCDDNCKO_03278 4.9e-221 EK COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PCDDNCKO_03279 1.1e-119 yvfI K COG2186 Transcriptional regulators
PCDDNCKO_03280 5e-304 yvfH C L-lactate permease
PCDDNCKO_03281 7.9e-241 rpoN K COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog
PCDDNCKO_03282 2.7e-32 yvfG S YvfG protein
PCDDNCKO_03283 1.1e-183 yvfF GM Exopolysaccharide biosynthesis protein
PCDDNCKO_03284 3.1e-220 epsN 2.6.1.102 E Belongs to the DegT DnrJ EryC1 family
PCDDNCKO_03285 5.6e-54 epsM GM COG0110 Acetyltransferase (isoleucine patch superfamily)
PCDDNCKO_03286 9.8e-109 epsL M COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PCDDNCKO_03287 1.8e-273 pglK S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PCDDNCKO_03288 6.1e-196 epsJ GT2 S COG0463 Glycosyltransferases involved in cell wall biogenesis
PCDDNCKO_03289 2.2e-204 epsI GM pyruvyl transferase
PCDDNCKO_03290 3.4e-194 epsH GT2 S Glycosyltransferase like family 2
PCDDNCKO_03291 3.5e-205 epsG S EpsG family
PCDDNCKO_03292 1.4e-212 epsF GT4 M Glycosyl transferases group 1
PCDDNCKO_03293 1.8e-161 epsE GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
PCDDNCKO_03294 2.6e-219 epsD GT4 M Glycosyl transferase 4-like
PCDDNCKO_03295 0.0 pglF 4.2.1.115, 4.2.1.135, 4.2.1.46 GM Polysaccharide biosynthesis protein
PCDDNCKO_03296 1.4e-116 epsB 2.7.10.2 D COG0489 ATPases involved in chromosome partitioning
PCDDNCKO_03297 1.2e-118 ywqC M biosynthesis protein
PCDDNCKO_03298 5.1e-78 slr K transcriptional
PCDDNCKO_03299 8.7e-281 pnbA CE10 I Belongs to the type-B carboxylesterase lipase family
PCDDNCKO_03301 5.2e-98 ywjB H RibD C-terminal domain
PCDDNCKO_03302 1.5e-112 yyaS S Membrane
PCDDNCKO_03303 2.4e-92 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PCDDNCKO_03304 1.6e-93 padC Q Phenolic acid decarboxylase
PCDDNCKO_03305 6.1e-55 MA20_18690 S Protein of unknown function (DUF3237)
PCDDNCKO_03306 2.9e-15 S Protein of unknown function (DUF1433)
PCDDNCKO_03307 7.1e-25 S Protein of unknown function (DUF1433)
PCDDNCKO_03308 1.1e-21 S Protein of unknown function (DUF1433)
PCDDNCKO_03309 4.9e-17 S Protein of unknown function (DUF1433)
PCDDNCKO_03310 2.2e-228 I Pfam Lipase (class 3)
PCDDNCKO_03311 3.1e-34
PCDDNCKO_03313 4.4e-296 cscA 3.2.1.26, 3.2.1.65 GH32 G invertase
PCDDNCKO_03314 3.7e-216 rafB P LacY proton/sugar symporter
PCDDNCKO_03315 2.5e-183 scrR K transcriptional
PCDDNCKO_03316 2.4e-104 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PCDDNCKO_03317 1.5e-97 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S Haloacid dehalogenase-like hydrolase
PCDDNCKO_03318 0.0 malL 3.2.1.10 GH13 G COG0366 Glycosidases
PCDDNCKO_03319 0.0 yvdK 2.4.1.8 GH65 G Glycoside hydrolase, family 65
PCDDNCKO_03320 1.5e-102 malA S Protein of unknown function (DUF1189)
PCDDNCKO_03321 3.9e-140 malD P transport
PCDDNCKO_03322 9.1e-221 malC P COG1175 ABC-type sugar transport systems, permease components
PCDDNCKO_03323 6.7e-205 mdxE G COG2182 Maltose-binding periplasmic proteins domains
PCDDNCKO_03324 4.9e-310 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Alpha amylase, N-terminal ig-like domain
PCDDNCKO_03325 1.6e-161 yvdE K Transcriptional regulator
PCDDNCKO_03326 3.4e-103 yvdD 3.2.2.10 S Belongs to the LOG family
PCDDNCKO_03327 1.5e-52 yvdC S MazG nucleotide pyrophosphohydrolase domain
PCDDNCKO_03328 1.6e-280 sulP P COG0659 Sulfate permease and related transporters (MFS superfamily)
PCDDNCKO_03329 7.4e-106 ytiB 4.2.1.1 P Reversible hydration of carbon dioxide
PCDDNCKO_03330 1.5e-183 ghrB 1.1.1.215, 1.1.1.26, 1.1.1.43, 1.1.1.79, 1.1.1.81 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PCDDNCKO_03331 1.6e-79 M Ribonuclease
PCDDNCKO_03332 7.4e-143 nhoA 2.3.1.118 Q Belongs to the arylamine N-acetyltransferase family
PCDDNCKO_03333 1.2e-36 crh G Phosphocarrier protein Chr
PCDDNCKO_03334 7e-170 whiA K May be required for sporulation
PCDDNCKO_03335 2.2e-176 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PCDDNCKO_03336 1.1e-166 rapZ S Displays ATPase and GTPase activities
PCDDNCKO_03337 6.5e-87 yvcI 3.6.1.55 F COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
PCDDNCKO_03338 3.5e-177 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PCDDNCKO_03339 5e-124 usp CBM50 M protein conserved in bacteria
PCDDNCKO_03340 8.7e-273 S COG0457 FOG TPR repeat
PCDDNCKO_03341 1.4e-190 sasA T Histidine kinase
PCDDNCKO_03342 5e-122 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCDDNCKO_03343 2.2e-52
PCDDNCKO_03344 0.0 msbA2 3.6.3.44 V ABC transporter
PCDDNCKO_03345 8.1e-111 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E belongs to the PRA-CH family
PCDDNCKO_03346 1.8e-136 hisF E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PCDDNCKO_03347 3.2e-130 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PCDDNCKO_03348 8.1e-114 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PCDDNCKO_03349 3e-107 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
PCDDNCKO_03350 2.5e-234 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PCDDNCKO_03351 5.6e-115 hisG 2.4.2.17 E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PCDDNCKO_03352 1e-207 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PCDDNCKO_03353 3.1e-138 yvpB NU protein conserved in bacteria
PCDDNCKO_03354 4.3e-81 yvoF S COG0110 Acetyltransferase (isoleucine patch superfamily)
PCDDNCKO_03355 3.1e-113 ppaX 3.1.3.18, 3.6.1.1 S Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK P. Might play a role in controlling the intracellular pyrophosphate pool
PCDDNCKO_03356 1.2e-149 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PCDDNCKO_03357 1.5e-169 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Also phosphorylates dephosphorylates the HPr-like catabolite repression protein crh on a specific serine residue. Therefore, by controlling the phosphorylation state of HPr and crh, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PCDDNCKO_03358 6.1e-224 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PCDDNCKO_03359 8.9e-133 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PCDDNCKO_03360 1.1e-133 yvoA K transcriptional
PCDDNCKO_03361 4.7e-105 yxaF K Transcriptional regulator
PCDDNCKO_03362 0.0 yvnB 3.1.4.53 Q Calcineurin-like phosphoesterase
PCDDNCKO_03363 1.5e-40 yvlD S Membrane
PCDDNCKO_03364 9.6e-26 pspB KT PspC domain
PCDDNCKO_03365 4.6e-165 yvlB S Putative adhesin
PCDDNCKO_03366 6.1e-49 yvlA
PCDDNCKO_03367 2.2e-32 yvkN
PCDDNCKO_03368 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PCDDNCKO_03369 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PCDDNCKO_03370 7.6e-33 csbA S protein conserved in bacteria
PCDDNCKO_03371 0.0 yvkC 2.7.9.2 GT Phosphotransferase
PCDDNCKO_03372 2.4e-110 yvkB K Transcriptional regulator
PCDDNCKO_03373 5.1e-227 yvkA EGP Major facilitator Superfamily
PCDDNCKO_03374 5.5e-27 bacT Q Thioesterase domain
PCDDNCKO_03376 9.5e-176 S Psort location CytoplasmicMembrane, score
PCDDNCKO_03377 3.3e-51 E Saccharopine dehydrogenase
PCDDNCKO_03378 2.8e-100 V ABC transporter transmembrane region
PCDDNCKO_03379 0.0 Q TIGRFAM amino acid adenylation domain
PCDDNCKO_03380 0.0 fusAA Q Non-ribosomal peptide synthetase modules and related proteins
PCDDNCKO_03381 5.8e-65 IQ KR domain
PCDDNCKO_03383 3.9e-20 L Transposase and inactivated derivatives
PCDDNCKO_03384 1.1e-220 minJ O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PCDDNCKO_03385 1.5e-55 swrA S Swarming motility protein
PCDDNCKO_03386 5.5e-256 ctpB 3.4.21.102 M Belongs to the peptidase S41A family
PCDDNCKO_03387 1.1e-227 ywoF P Right handed beta helix region
PCDDNCKO_03388 1.7e-154 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
PCDDNCKO_03389 1e-122 ftsE D cell division ATP-binding protein FtsE
PCDDNCKO_03390 2.8e-36 cccB C COG2010 Cytochrome c, mono- and diheme variants
PCDDNCKO_03391 1.8e-148 yvjA S Uncharacterized protein conserved in bacteria (DUF2179)
PCDDNCKO_03392 1.4e-176 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PCDDNCKO_03393 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PCDDNCKO_03394 3.7e-102 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PCDDNCKO_03395 6.8e-68
PCDDNCKO_03396 5.9e-10 fliT S bacterial-type flagellum organization
PCDDNCKO_03397 3e-66 fliS N flagellar protein FliS
PCDDNCKO_03398 1.4e-244 fliD N morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
PCDDNCKO_03399 1.6e-100 fliC N Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
PCDDNCKO_03400 2.3e-31 csrA T Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
PCDDNCKO_03401 1.6e-73 fliW S Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
PCDDNCKO_03402 8.9e-80 yviE
PCDDNCKO_03403 6.1e-163 flgL N Belongs to the bacterial flagellin family
PCDDNCKO_03404 2.8e-274 flgK N flagellar hook-associated protein
PCDDNCKO_03405 8.9e-81 flgN NOU FlgN protein
PCDDNCKO_03406 4.7e-39 flgM KNU Negative regulator of flagellin synthesis
PCDDNCKO_03407 2.4e-74 yvyF S flagellar protein
PCDDNCKO_03408 4.5e-77 comFC S Phosphoribosyl transferase domain
PCDDNCKO_03409 1.7e-42 comFB S Late competence development protein ComFB
PCDDNCKO_03410 2.8e-260 comFA L COG4098 Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
PCDDNCKO_03411 7.1e-158 degV S protein conserved in bacteria
PCDDNCKO_03412 2e-126 degU KT COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PCDDNCKO_03413 1.7e-181 degS 2.7.13.3 T Member of the two-component regulatory system DegS DegU, which plays an important role in the transition growth phase
PCDDNCKO_03414 2e-120 yvyE 3.4.13.9 S Domain of unknown function (DUF1949)
PCDDNCKO_03415 7.8e-166 yvhJ K Transcriptional regulator
PCDDNCKO_03416 1.1e-182 tagO 2.7.8.33, 2.7.8.35 M COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase UDP-N-acetylglucosamine-1-phosphate transferase
PCDDNCKO_03417 6.4e-237 tuaH M Teichuronic acid biosynthesis glycosyltransferase tuaH
PCDDNCKO_03418 8.9e-144 tuaG GT2 M Glycosyltransferase like family 2
PCDDNCKO_03419 1.2e-115 tuaF M protein involved in exopolysaccharide biosynthesis
PCDDNCKO_03420 1.1e-240 tuaE M Teichuronic acid biosynthesis protein
PCDDNCKO_03421 1.1e-248 tuaD 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PCDDNCKO_03422 5.4e-220 tuaC 2.4.1.21, 3.2.1.1 GH13,GT4,GT5 GM Teichuronic acid
PCDDNCKO_03423 1e-257 wzxC S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PCDDNCKO_03424 6.2e-117 tuaA M COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PCDDNCKO_03425 1.2e-269 lytC 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
PCDDNCKO_03426 0.0 lytB 3.5.1.28 D Stage II sporulation protein
PCDDNCKO_03427 1.3e-48
PCDDNCKO_03428 1.7e-149 lytR K May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG)
PCDDNCKO_03429 1.3e-207 mnaA 5.1.3.14 M Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PCDDNCKO_03430 2.8e-165 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PCDDNCKO_03431 3.2e-281 tagH 3.6.3.38, 3.6.3.40 GM Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PCDDNCKO_03432 1.7e-151 tagG GM Transport permease protein
PCDDNCKO_03433 0.0 tagF 2.7.8.12 M glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
PCDDNCKO_03434 1.8e-292 M Glycosyltransferase like family 2
PCDDNCKO_03435 3.4e-70 tagD 2.7.7.15, 2.7.7.39 IM Cytidylyltransferase
PCDDNCKO_03436 7.7e-143 tagA 2.4.1.187 GT26 M Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PCDDNCKO_03437 1.5e-219 tagB 2.7.8.14, 2.7.8.44, 2.7.8.47 M glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
PCDDNCKO_03438 1.2e-216 atl 3.2.1.96, 3.5.1.28 GH73 G Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PCDDNCKO_03439 1e-184 pmi 5.3.1.8 G mannose-6-phosphate isomerase
PCDDNCKO_03440 5.7e-264 gerBA EG Spore germination protein
PCDDNCKO_03441 3.6e-194 gerBB E Spore germination protein
PCDDNCKO_03442 9.7e-211 gerAC S Spore germination protein
PCDDNCKO_03443 5.8e-266 GT2,GT4 J Glycosyl transferase family 2
PCDDNCKO_03444 3.2e-248 ywtG EGP Major facilitator Superfamily
PCDDNCKO_03445 7.2e-178 ywtF K Transcriptional regulator
PCDDNCKO_03446 1.4e-158 ywtE 3.1.3.104 S hydrolases of the HAD superfamily
PCDDNCKO_03447 4.5e-36 yttA 2.7.13.3 S Pfam Transposase IS66
PCDDNCKO_03448 6.3e-240 pgdS CBM50 M COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
PCDDNCKO_03449 1.3e-20 ywtC
PCDDNCKO_03450 1.2e-219 capA M enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
PCDDNCKO_03451 2.3e-70 pgsC S biosynthesis protein
PCDDNCKO_03452 1e-223 murD 6.3.2.9 M COG0769 UDP-N-acetylmuramyl tripeptide synthase
PCDDNCKO_03453 2.2e-183 gerKA EG Spore germination protein
PCDDNCKO_03454 6.7e-193 gerKB E Spore germination protein
PCDDNCKO_03455 4.8e-202 gerKC S Spore germination B3/ GerAC like, C-terminal
PCDDNCKO_03456 2.9e-179 rbsR K transcriptional
PCDDNCKO_03457 6.7e-159 rbsK 2.7.1.15, 2.7.1.4 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PCDDNCKO_03458 6.2e-64 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PCDDNCKO_03459 2.1e-277 rbsA 3.6.3.17 G Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system
PCDDNCKO_03460 5.5e-154 rbsC G Belongs to the binding-protein-dependent transport system permease family
PCDDNCKO_03461 5.7e-161 rbsB G COG1879 ABC-type sugar transport system, periplasmic component
PCDDNCKO_03462 1.2e-89 batE T Sh3 type 3 domain protein
PCDDNCKO_03463 2.8e-96 ywrO 1.6.5.2 S NADPH-quinone reductase (modulator of drug activity B)
PCDDNCKO_03464 7.9e-148 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
PCDDNCKO_03465 2.4e-309 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
PCDDNCKO_03466 9e-167 alsR K LysR substrate binding domain
PCDDNCKO_03467 4.7e-241 ywrK P Involved in arsenical resistance. Thought to form the channel of an arsenite pump
PCDDNCKO_03468 4.4e-126 ywrJ
PCDDNCKO_03469 9.2e-132 cotB
PCDDNCKO_03470 5e-212 cotH M Spore Coat
PCDDNCKO_03471 2.2e-09
PCDDNCKO_03472 4.8e-111 ywrF S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PCDDNCKO_03473 6.1e-07 S Domain of unknown function (DUF4181)
PCDDNCKO_03474 6.1e-304 ggt 2.3.2.2, 3.4.19.13 E gamma-glutamyltransferase
PCDDNCKO_03475 1.1e-83 ywrC K Transcriptional regulator
PCDDNCKO_03476 3.9e-102 ywrB P Chromate transporter
PCDDNCKO_03477 3.8e-88 ywrA P COG2059 Chromate transport protein ChrA
PCDDNCKO_03479 1.2e-94 ywqN S NAD(P)H-dependent
PCDDNCKO_03480 1.8e-156 K Transcriptional regulator
PCDDNCKO_03481 9.7e-132 nfi 3.1.21.7 L DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA
PCDDNCKO_03482 4.6e-76
PCDDNCKO_03483 1e-63
PCDDNCKO_03484 1.1e-257 ywqJ S Pre-toxin TG
PCDDNCKO_03485 4.3e-37 ywqI S Family of unknown function (DUF5344)
PCDDNCKO_03486 1.9e-21 S Domain of unknown function (DUF5082)
PCDDNCKO_03488 4.8e-148 ywqG S Domain of unknown function (DUF1963)
PCDDNCKO_03489 1.3e-246 ugd 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PCDDNCKO_03490 4.2e-141 ywqE 3.1.3.48 GM COG4464 Capsular polysaccharide biosynthesis protein
PCDDNCKO_03491 5.7e-121 ywqD 2.7.10.1 D COG0489 ATPases involved in chromosome partitioning
PCDDNCKO_03492 4.4e-111 ywqC M biosynthesis protein
PCDDNCKO_03493 1.3e-14
PCDDNCKO_03494 1e-306 ywqB S SWIM zinc finger
PCDDNCKO_03495 0.0 ywqA L COG0553 Superfamily II DNA RNA helicases, SNF2 family
PCDDNCKO_03496 4.4e-155 ywpJ 3.1.3.104 S hydrolases of the HAD superfamily
PCDDNCKO_03497 7.5e-138 glcR K DeoR C terminal sensor domain
PCDDNCKO_03498 3.7e-57 ssbB L Single-stranded DNA-binding protein
PCDDNCKO_03499 4e-62 ywpG
PCDDNCKO_03500 1.1e-68 ywpF S YwpF-like protein
PCDDNCKO_03501 4.1e-47 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PCDDNCKO_03502 4.9e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PCDDNCKO_03503 5.5e-200 S aspartate phosphatase
PCDDNCKO_03504 4.1e-142 flhP N flagellar basal body
PCDDNCKO_03505 3.2e-128 flhO N flagellar basal body
PCDDNCKO_03506 2.7e-180 mbl D Rod shape-determining protein
PCDDNCKO_03507 1.8e-44 spoIIID K Stage III sporulation protein D
PCDDNCKO_03508 8.5e-72 ywoH K transcriptional
PCDDNCKO_03509 4.9e-213 ywoG EGP Major facilitator Superfamily
PCDDNCKO_03510 1.6e-274 ybbW FH COG1953 Cytosine uracil thiamine allantoin permeases
PCDDNCKO_03511 1e-243 ywoD EGP Major facilitator superfamily
PCDDNCKO_03512 5.7e-103 phzA Q Isochorismatase family
PCDDNCKO_03513 2.5e-228 amt P Ammonium transporter
PCDDNCKO_03514 1.7e-57 nrgB K Belongs to the P(II) protein family
PCDDNCKO_03515 4.9e-210 ftsW D Belongs to the SEDS family
PCDDNCKO_03516 3.2e-101 bcrC 3.6.1.27 I COG0671 Membrane-associated phospholipid phosphatase
PCDDNCKO_03517 6.6e-72 ywnJ S VanZ like family
PCDDNCKO_03518 8.4e-122 spoIIQ M COG0739 Membrane proteins related to metalloendopeptidases
PCDDNCKO_03519 1.2e-88 ywnH 2.3.1.183 M COG1247 Sortase and related acyltransferases
PCDDNCKO_03520 1.2e-10 ywnC S Family of unknown function (DUF5362)
PCDDNCKO_03521 6e-68 ywnF S Family of unknown function (DUF5392)
PCDDNCKO_03522 8.4e-276 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PCDDNCKO_03523 1.2e-51 ywnC S Family of unknown function (DUF5362)
PCDDNCKO_03524 2e-120 xlnB 3.2.1.8 G Glycosyl hydrolases family 11
PCDDNCKO_03525 1.8e-66 ywnA K Transcriptional regulator
PCDDNCKO_03526 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
PCDDNCKO_03527 1.9e-62 ureB 3.5.1.5 E Belongs to the urease beta subunit family
PCDDNCKO_03528 1.1e-50 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
PCDDNCKO_03529 7.4e-10 csbD K CsbD-like
PCDDNCKO_03530 3.6e-82 ywmF S Peptidase M50
PCDDNCKO_03531 4.8e-93 S response regulator aspartate phosphatase
PCDDNCKO_03532 1.8e-192 moaA 4.1.99.22, 4.6.1.17 H Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
PCDDNCKO_03533 3.8e-145 fdhD C Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
PCDDNCKO_03535 8.6e-122 ywmD S protein containing a von Willebrand factor type A (vWA) domain
PCDDNCKO_03536 6e-123 ywmC S protein containing a von Willebrand factor type A (vWA) domain
PCDDNCKO_03537 2.8e-188 spoIID D Stage II sporulation protein D
PCDDNCKO_03538 4.7e-241 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PCDDNCKO_03539 2.4e-133 ywmB S TATA-box binding
PCDDNCKO_03540 1.3e-32 ywzB S membrane
PCDDNCKO_03541 3.5e-90 ywmA
PCDDNCKO_03542 1.8e-63 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PCDDNCKO_03543 5.4e-267 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PCDDNCKO_03544 5.9e-152 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PCDDNCKO_03545 8.2e-282 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PCDDNCKO_03546 4.5e-89 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PCDDNCKO_03547 1.3e-42 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PCDDNCKO_03548 1.6e-26 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PCDDNCKO_03549 9.3e-130 atpB C it plays a direct role in the translocation of protons across the membrane
PCDDNCKO_03550 2.1e-61 atpI S ATP synthase
PCDDNCKO_03551 4e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PCDDNCKO_03552 3.6e-235 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PCDDNCKO_03553 5.9e-97 ywlG S Belongs to the UPF0340 family
PCDDNCKO_03554 5.4e-80 rpiB 5.3.1.6 G Ribose 5-phosphate isomerase
PCDDNCKO_03555 4.3e-77 ywlE 3.1.3.48, 3.9.1.2, 5.3.1.6 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PCDDNCKO_03556 2.6e-84 mntP P Probably functions as a manganese efflux pump
PCDDNCKO_03557 1.1e-189 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PCDDNCKO_03558 3.9e-75 ywlB 1.20.4.1, 2.3.1.1 E Belongs to the acetyltransferase family. ArgA subfamily
PCDDNCKO_03559 4.4e-110 spoIIR S stage II sporulation protein R
PCDDNCKO_03560 1.4e-60 ywlA S Uncharacterised protein family (UPF0715)
PCDDNCKO_03562 1.6e-157 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PCDDNCKO_03563 1.9e-192 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PCDDNCKO_03564 6.4e-66 yaeR E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PCDDNCKO_03565 9.7e-95 racA K Required for the formation of axial filaments and for anchoring the origin regions at the cell poles in sporulating cells, thus ensuring proper chromosome segregation in the prespore. Binds in a dispersed manner throughout the chromosome but preferentially to sites clustered in the origin portion of the chromosome, causing condensation of the chromosome and its remodeling into an elongated, anchored structure
PCDDNCKO_03566 3.6e-158 ywkB S Membrane transport protein
PCDDNCKO_03567 0.0 sfcA 1.1.1.38 C malic enzyme
PCDDNCKO_03568 4.6e-103 tdk 2.7.1.21 F thymidine kinase
PCDDNCKO_03569 1.1e-32 rpmE J Binds the 23S rRNA
PCDDNCKO_03570 4.3e-239 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PCDDNCKO_03571 5.6e-175 glpX 3.1.3.11, 3.1.3.37 G fructose-1,6-bisphosphatase
PCDDNCKO_03572 6.6e-240 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PCDDNCKO_03573 6.4e-111 tal 2.2.1.2 G Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PCDDNCKO_03574 5.5e-158 fbaA 4.1.2.13, 4.1.2.29 G Aldolase
PCDDNCKO_03575 8.5e-63 spo0F T COG0784 FOG CheY-like receiver
PCDDNCKO_03576 1.7e-93 ywjG S Domain of unknown function (DUF2529)
PCDDNCKO_03577 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PCDDNCKO_03578 2.4e-47 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PCDDNCKO_03579 0.0 fadF C COG0247 Fe-S oxidoreductase
PCDDNCKO_03580 1e-218 clsB I Belongs to the phospholipase D family. Cardiolipin synthase subfamily
PCDDNCKO_03581 3e-181 uvsE L Component in a DNA repair pathway. Removal of UV-light damaged nucleotides. Recognizes pyrimidine dimers and cleave a phosphodiester bond immediately 5' to the lesion
PCDDNCKO_03582 4.2e-43 ywjC
PCDDNCKO_03583 0.0 ywjA V ABC transporter
PCDDNCKO_03584 6.4e-287 ywiE I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PCDDNCKO_03585 2.4e-102 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PCDDNCKO_03586 1.5e-123 narI 1.7.5.1 C nitrate reductase, gamma
PCDDNCKO_03587 5.6e-95 narJ 1.7.5.1 C nitrate reductase
PCDDNCKO_03588 4.8e-295 narH 1.7.5.1 C Nitrate reductase, beta
PCDDNCKO_03589 0.0 narG 1.7.5.1 C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PCDDNCKO_03590 1e-84 arfM T cyclic nucleotide binding
PCDDNCKO_03591 1e-136 ywiC S YwiC-like protein
PCDDNCKO_03592 1.3e-128 fnr K helix_turn_helix, cAMP Regulatory protein
PCDDNCKO_03593 5.8e-214 narK P COG2223 Nitrate nitrite transporter
PCDDNCKO_03594 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PCDDNCKO_03595 1.1e-42 ywiB S protein conserved in bacteria
PCDDNCKO_03596 6.4e-77 S aspartate phosphatase
PCDDNCKO_03598 9.7e-29 ydcG K sequence-specific DNA binding
PCDDNCKO_03599 5e-33
PCDDNCKO_03600 2e-28 S Domain of unknown function (DUF4177)
PCDDNCKO_03602 3.1e-76 CP Membrane
PCDDNCKO_03605 5.4e-169 speB 3.5.3.11 E Belongs to the arginase family
PCDDNCKO_03606 4.1e-158 speE 2.5.1.16 E Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
PCDDNCKO_03607 0.0 pbpG 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PCDDNCKO_03608 4.2e-82
PCDDNCKO_03609 1.4e-95 ywhD S YwhD family
PCDDNCKO_03610 1.2e-117 ywhC S Peptidase family M50
PCDDNCKO_03611 1.3e-24 dmpI 5.3.2.6 G 4-oxalocrotonate tautomerase
PCDDNCKO_03612 8e-70 ywhA K Transcriptional regulator
PCDDNCKO_03613 1.5e-246 yhdG_1 E C-terminus of AA_permease
PCDDNCKO_03614 9.2e-89 ywgA 2.1.1.72, 3.1.21.3
PCDDNCKO_03615 3e-256 ywfO S COG1078 HD superfamily phosphohydrolases
PCDDNCKO_03616 6.9e-36 ywzC S Belongs to the UPF0741 family
PCDDNCKO_03617 3e-110 rsfA_1
PCDDNCKO_03618 5.3e-50 padR K PadR family transcriptional regulator
PCDDNCKO_03619 4.4e-92 S membrane
PCDDNCKO_03620 7.2e-164 V ABC transporter, ATP-binding protein
PCDDNCKO_03621 1.3e-168 yhcI S ABC transporter (permease)
PCDDNCKO_03624 6.7e-178
PCDDNCKO_03626 1.2e-157 lipL 2.3.1.200, 2.3.1.204 H Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes
PCDDNCKO_03627 3.3e-161 cysL K Transcriptional regulator
PCDDNCKO_03628 4.8e-158 MA20_14895 S Conserved hypothetical protein 698
PCDDNCKO_03629 5.1e-176 pta 2.3.1.19, 2.3.1.8, 3.6.3.21 C In Salmonella this enzyme is required for ethanolamine catabolism
PCDDNCKO_03630 2.5e-146 ywfI C May function as heme-dependent peroxidase
PCDDNCKO_03631 3.7e-140 IQ Enoyl-(Acyl carrier protein) reductase
PCDDNCKO_03632 3.5e-235 ywfG 2.6.1.83 E Aminotransferase class I and II
PCDDNCKO_03633 1.8e-207 bacE EGP Major facilitator Superfamily
PCDDNCKO_03634 4.4e-269 purD 6.3.2.49, 6.3.4.13 F Part of the bacABCDEFG operon responsible for the biosynthesis of bacilysin, an irreversible inactivator of the glutaminase domain of glucosamine synthetase. Catalyzes the formation of alpha-dipeptides from various L-amino acids in the presence of ATP. In vivo catalyzes the ligation of L-alanine and L-anticapsin (epoxycyclohexanonyl-Ala) to produce the final bacilysin antibiotic (L-Ala-L-4S-cyclohexenonyl-Ala dipeptide)
PCDDNCKO_03635 3e-139 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PCDDNCKO_03636 1.5e-137 bacB 5.3.3.19, 5.4.99.5 S Part of the bacABCDEF operon responsible for the biosynthesis of the nonribosomally synthesized dipeptide antibiotic bacilysin, composed of L-alanine and L-anticapsin. Bacilysin is an irreversible inactivator of the glutaminase domain of glucosamine synthetase. BacB catalyzes the allylic isomerization of the
PCDDNCKO_03637 1.1e-112 pheA 1.1.1.3, 1.3.1.12, 4.1.1.100, 4.2.1.51, 5.4.99.5 E Part of the bacABCDEF operon responsible for the biosynthesis of the nonribosomally synthesized dipeptide antibiotic bacilysin, composed of L-alanine and L-anticapsin. Bacilysin is an irreversible inactivator of the glutaminase domain of glucosamine synthetase. BacA is an unusual prephenate decarboxylase that avoids the typical aromatization of the cyclohexadienol ring of prephenate. BacA catalyzes the protonation of prephenate (1-carboxy-4-hydroxy-alpha-oxo-2,5-cyclohexadiene-1- propanoic acid) at C6 position, followed by a decarboxylation to produce the endocyclic-delta(4),delta(8)-7R-dihydro- hydroxyphenylpyruvate (en-H2HPP). En-H2HPP is able to undergo a slow nonenzymatic isomerization to produce the exocyclic- delta(3),delta(5)-dihydro-hydroxyphenylpyruvate (ex-H2HPP). BacA isomerizes only the pro-R double bond in prephenate
PCDDNCKO_03638 7.1e-223 ywfA EGP Major facilitator Superfamily
PCDDNCKO_03639 2.4e-207 tcaB EGP Major facilitator Superfamily
PCDDNCKO_03640 7.5e-261 lysP E amino acid
PCDDNCKO_03641 0.0 rocB E arginine degradation protein
PCDDNCKO_03642 6.6e-295 putA 1.2.1.88, 1.5.5.2 C Belongs to the aldehyde dehydrogenase family. RocA subfamily
PCDDNCKO_03643 2.5e-247 rocG 1.4.1.2, 1.4.1.3 E Belongs to the Glu Leu Phe Val dehydrogenases family
PCDDNCKO_03644 3.5e-158 T PhoQ Sensor
PCDDNCKO_03645 1.7e-125 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCDDNCKO_03646 1.2e-75
PCDDNCKO_03647 1.1e-119 S ABC-2 family transporter protein
PCDDNCKO_03648 4.3e-172 bcrA5 V ABC transporter, ATP-binding protein
PCDDNCKO_03649 3.5e-87 spsL 5.1.3.13 M Spore Coat
PCDDNCKO_03650 3.6e-162 spsK 1.1.1.133 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PCDDNCKO_03651 6.7e-181 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PCDDNCKO_03652 5.4e-138 spsI 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PCDDNCKO_03653 1.9e-181 spsG M Spore Coat
PCDDNCKO_03654 3.1e-133 spsF M Spore Coat
PCDDNCKO_03655 9.9e-216 spsE 2.5.1.56 M acid synthase
PCDDNCKO_03656 6.1e-157 spsD 2.3.1.210 K Spore Coat
PCDDNCKO_03657 2.8e-221 spsC E Belongs to the DegT DnrJ EryC1 family
PCDDNCKO_03658 3.7e-276 spsB M Capsule polysaccharide biosynthesis protein
PCDDNCKO_03659 2.2e-142 spsA M Spore Coat
PCDDNCKO_03660 2.3e-54 gerQ S Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA
PCDDNCKO_03661 5.5e-54 ywdK S small membrane protein
PCDDNCKO_03662 1.8e-229 ywdJ F Xanthine uracil
PCDDNCKO_03663 7.3e-41 ywdI S Family of unknown function (DUF5327)
PCDDNCKO_03664 3.7e-133 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PCDDNCKO_03665 5e-153 ywdF GT2,GT4 S Glycosyltransferase like family 2
PCDDNCKO_03667 2.2e-87 ywdD
PCDDNCKO_03668 6.3e-57 pex K Transcriptional regulator PadR-like family
PCDDNCKO_03669 6e-146 thiD 2.5.1.3, 2.7.1.35, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PCDDNCKO_03670 9.7e-20 ywdA
PCDDNCKO_03671 7.8e-282 scrB 3.2.1.26, 3.2.1.65 GH32 G invertase
PCDDNCKO_03672 2.4e-248 scrA 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PCDDNCKO_03673 2e-07 sacT K transcriptional antiterminator
PCDDNCKO_03674 1.4e-150 sacT K transcriptional antiterminator
PCDDNCKO_03676 0.0 vpr O Belongs to the peptidase S8 family
PCDDNCKO_03677 1.2e-183 ywcH C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PCDDNCKO_03678 1.4e-136 nfrA 1.5.1.38, 1.5.1.39 C Oxidoreductase
PCDDNCKO_03679 1e-207 rodA D Belongs to the SEDS family
PCDDNCKO_03680 2.7e-78 ysnE K acetyltransferase
PCDDNCKO_03681 3e-38 ywcE S Required for proper spore morphogenesis. Important for spore germination
PCDDNCKO_03682 2e-64 qoxD 1.10.3.12, 1.9.3.1 C quinol oxidase, subunit
PCDDNCKO_03683 8.1e-111 qoxC 1.10.3.12, 1.9.3.1 C quinol oxidase, subunit
PCDDNCKO_03684 0.0 qoxB 1.10.3.12, 1.9.3.1 C Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
PCDDNCKO_03685 8.3e-179 cyoA 1.10.3.10, 1.10.3.12 C Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I
PCDDNCKO_03686 4.2e-26 ywzA S membrane
PCDDNCKO_03687 1.1e-292 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PCDDNCKO_03688 5e-226 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PCDDNCKO_03689 3.5e-62 gtcA S GtrA-like protein
PCDDNCKO_03690 4.3e-112 ywcC K Bacterial regulatory proteins, tetR family
PCDDNCKO_03692 3.6e-128 H Methionine biosynthesis protein MetW
PCDDNCKO_03693 5.3e-132 S Streptomycin biosynthesis protein StrF
PCDDNCKO_03694 2.1e-111 ywbO Q dithiol-disulfide isomerase involved in polyketide biosynthesis
PCDDNCKO_03695 4.6e-238 ywbN P Dyp-type peroxidase family protein
PCDDNCKO_03696 9.5e-113 thiE 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PCDDNCKO_03697 4.5e-133 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PCDDNCKO_03698 8.2e-152 ywbI K Transcriptional regulator
PCDDNCKO_03699 2.5e-57 ywbH S Increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation. Inhibited by the antiholin-like proteins LrgAB. In an unstressed cell, the LrgAB products probably inhibit the function of the CidA protein. When a cell is stressed by the addition of antibiotics or by other factors in the environment, CidA possibly oligomerizes within the bacterial cell membrane, creating lesions that disrupt the proton motive force, which in turn results in loss of cell viability. These lesions are also hypothesized to regulate the subsequent cell lysis by either allowing the murein hydrolases access to the cell wall substrate and or regulating their activity by a
PCDDNCKO_03700 3.4e-110 ywbG M effector of murein hydrolase
PCDDNCKO_03701 1.8e-27 ywbE S Uncharacterized conserved protein (DUF2196)
PCDDNCKO_03702 9.3e-141 mta K transcriptional
PCDDNCKO_03703 1.9e-169 yjfC O Predicted Zn-dependent protease (DUF2268)
PCDDNCKO_03704 2e-222 ywbD 2.1.1.191 J Methyltransferase
PCDDNCKO_03705 7.6e-67 ywbC 4.4.1.5 E glyoxalase
PCDDNCKO_03706 2.4e-245 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PCDDNCKO_03707 1.8e-264 epr 3.4.21.62 O Belongs to the peptidase S8 family
PCDDNCKO_03708 2.6e-163 gspA M General stress
PCDDNCKO_03709 1.6e-48 ywaE K Transcriptional regulator
PCDDNCKO_03710 4.3e-196 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PCDDNCKO_03711 7.8e-117 ywaC 2.7.6.5 S protein conserved in bacteria
PCDDNCKO_03712 1.4e-167 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
PCDDNCKO_03713 6.1e-12 S D-Ala-teichoic acid biosynthesis protein
PCDDNCKO_03714 6.7e-292 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PCDDNCKO_03715 3.7e-229 dltB M membrane protein involved in D-alanine export
PCDDNCKO_03716 1.5e-36 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PCDDNCKO_03717 1.8e-228 dltD M COG3966 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PCDDNCKO_03718 7.6e-205 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PCDDNCKO_03719 1.2e-252 licH 3.2.1.86 GT4 G COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
PCDDNCKO_03720 1.7e-51 licA 2.7.1.196, 2.7.1.205 G phosphotransferase system
PCDDNCKO_03721 2.8e-249 licC 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PCDDNCKO_03722 1.2e-49 licB 2.7.1.196, 2.7.1.205 G transporter subunit IIB
PCDDNCKO_03723 0.0 licR 2.7.1.202 GKT Mga helix-turn-helix domain
PCDDNCKO_03724 1.8e-107 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PCDDNCKO_03725 4.3e-173 fhuB3 P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PCDDNCKO_03726 1.3e-179 fhuG1 P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PCDDNCKO_03727 3.7e-165 cbrA3 P Periplasmic binding protein
PCDDNCKO_03728 1.6e-58 arsR K transcriptional
PCDDNCKO_03729 1.5e-228 arsB P Involved in arsenical resistance. Thought to form the channel of an arsenite pump
PCDDNCKO_03730 2e-49 ydhM 2.7.1.196, 2.7.1.205 G phosphotransferase system
PCDDNCKO_03731 1.7e-48 ydhN3 2.7.1.196, 2.7.1.205 G phosphotransferase system
PCDDNCKO_03732 1.8e-229 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PCDDNCKO_03733 6e-287 ydhP 3.2.1.21, 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PCDDNCKO_03734 5.3e-164 gmuE 2.7.1.2, 2.7.1.4 GK COG1940 Transcriptional regulator sugar kinase
PCDDNCKO_03735 9.9e-185 manA 5.3.1.8 G mannose-6-phosphate isomerase
PCDDNCKO_03736 9.2e-211 gmuG 3.2.1.78 GH26 G Belongs to the glycosyl hydrolase 26 family
PCDDNCKO_03737 0.0 katX 1.11.1.6 P serves to protect cells from the toxic effects of hydrogen peroxide
PCDDNCKO_03738 1.6e-193 yxeI 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
PCDDNCKO_03739 1e-251 yxlA F Belongs to the purine-cytosine permease (2.A.39) family
PCDDNCKO_03740 2.5e-155 nnrD 4.2.1.136, 5.1.99.6 G Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PCDDNCKO_03741 3.8e-291 cydD V ATP-binding protein
PCDDNCKO_03742 0.0 cydD V ATP-binding
PCDDNCKO_03743 5.5e-189 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase, subunit II
PCDDNCKO_03744 1.4e-267 cydA 1.10.3.14 C oxidase, subunit
PCDDNCKO_03745 1.5e-215 cimH C COG3493 Na citrate symporter
PCDDNCKO_03746 7.8e-157 yxkH G Polysaccharide deacetylase
PCDDNCKO_03747 1e-204 msmK P Belongs to the ABC transporter superfamily
PCDDNCKO_03748 2.6e-166 lrp QT PucR C-terminal helix-turn-helix domain
PCDDNCKO_03749 6.4e-143 yxkD S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PCDDNCKO_03750 1.9e-86 yxkC S Domain of unknown function (DUF4352)
PCDDNCKO_03751 3e-195 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PCDDNCKO_03752 3.6e-235 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PCDDNCKO_03755 3.5e-85 yxjI S LURP-one-related
PCDDNCKO_03756 2.8e-218 yxjG 2.1.1.14 E Methionine synthase
PCDDNCKO_03757 3.1e-156 rlmA 2.1.1.187 Q Methyltransferase domain
PCDDNCKO_03758 1.1e-210 nupG F Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PCDDNCKO_03759 2.7e-75 T Domain of unknown function (DUF4163)
PCDDNCKO_03760 1.6e-48 yxiS
PCDDNCKO_03761 0.0 katE 1.11.1.6, 3.5.1.124 P serves to protect cells from the toxic effects of hydrogen peroxide
PCDDNCKO_03762 1.6e-222 citH C Citrate transporter
PCDDNCKO_03763 7.3e-143 exoK GH16 M licheninase activity
PCDDNCKO_03764 1.7e-146 licT K transcriptional antiterminator
PCDDNCKO_03765 1.3e-221 yxiO S COG2270 Permeases of the major facilitator superfamily
PCDDNCKO_03766 1.3e-260 dbpA 3.6.4.13 JKL DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes
PCDDNCKO_03768 8.1e-15
PCDDNCKO_03769 1.1e-14 S YxiJ-like protein
PCDDNCKO_03772 3.5e-28 yxiG
PCDDNCKO_03773 5.9e-60 yxxG
PCDDNCKO_03775 1.6e-07
PCDDNCKO_03776 1.9e-200 pelB 4.2.2.10, 4.2.2.2 G Pectate lyase
PCDDNCKO_03777 1.2e-147 yxxF EG EamA-like transporter family
PCDDNCKO_03778 2.4e-72 yxiE T Belongs to the universal stress protein A family
PCDDNCKO_03779 0.0 L HKD family nuclease
PCDDNCKO_03780 4.7e-64 nudG 3.6.1.55, 3.6.1.65 L COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
PCDDNCKO_03781 2.6e-274 yxiA 3.2.1.99 GH43 G Belongs to the glycosyl hydrolase 43 family
PCDDNCKO_03782 7.7e-79 hutP K Antiterminator that binds to cis-acting regulatory sequences on the mRNA in the presence of histidine, thereby suppressing transcription termination and activating the hut operon for histidine utilization
PCDDNCKO_03783 2.1e-285 hutH 4.3.1.3 E Histidine ammonia-lyase
PCDDNCKO_03784 0.0 hutU 4.2.1.49 E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
PCDDNCKO_03785 3.9e-237 hutI 3.5.2.7 Q Imidazolone-5-propionate hydrolase
PCDDNCKO_03786 6.5e-176 hutG 3.5.3.11, 3.5.3.8 E Catalyzes the conversion of N-formimidoyl-L-glutamate to L-glutamate and formamide
PCDDNCKO_03787 7.5e-253 lysP E amino acid
PCDDNCKO_03788 7.9e-233 pdp 2.4.2.2, 2.4.2.4 F phosphorylase
PCDDNCKO_03789 2.3e-207 nupC F Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PCDDNCKO_03790 9.4e-113 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PCDDNCKO_03791 8.1e-171 deoR K COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
PCDDNCKO_03792 1.8e-150 yidA S hydrolases of the HAD superfamily
PCDDNCKO_03795 5.6e-09 yxeE
PCDDNCKO_03796 8.4e-23 yxeD
PCDDNCKO_03797 6e-35
PCDDNCKO_03798 1.4e-178 fhuD P Periplasmic binding protein
PCDDNCKO_03799 1.3e-57 yxeA S Protein of unknown function (DUF1093)
PCDDNCKO_03800 0.0 yxdM V ABC transporter (permease)
PCDDNCKO_03801 5.5e-141 yxdL V ABC transporter, ATP-binding protein
PCDDNCKO_03802 6e-177 T PhoQ Sensor
PCDDNCKO_03803 1e-122 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCDDNCKO_03804 8.6e-273 T Histidine kinase
PCDDNCKO_03805 9.1e-138 T Transcriptional regulator
PCDDNCKO_03806 3e-162 bcrA V ABC transporter, ATP-binding protein
PCDDNCKO_03807 1.3e-131 S permease
PCDDNCKO_03808 3.9e-128 S ABC-2 family transporter protein
PCDDNCKO_03809 2.3e-159 iolJ 4.1.2.13, 4.1.2.29 F Produces dihydroxyacetone phosphate (DHAP or glycerone phosphate) and malonic semialdehyde (MSA or 3-oxopropanoate) from 6-phospho-5-dehydro-2-deoxy-D-gluconate (DKGP)
PCDDNCKO_03810 6.6e-148 iolI 5.3.99.11 G Involved in the reversible interconverion of 2-keto-myo- inositol (2KMI, inosose or 2,4,6 3,5-pentahydroxycyclohexanone) to 1-keto-D-chiro-inositol (1KDCI or 2,3,5 4,6- pentahydroxycyclohexanone)
PCDDNCKO_03811 1.1e-166 iolH G Xylose isomerase-like TIM barrel
PCDDNCKO_03812 4.7e-196 iolG 1.1.1.18, 1.1.1.369 S Involved in the oxidation of myo-inositol (MI) and D- chiro-inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D-chiro-inositol (1KDCI), respectively
PCDDNCKO_03813 3e-232 iolF EGP Major facilitator Superfamily
PCDDNCKO_03814 2e-174 iolE 4.2.1.44 H Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6 3,5-pentahydroxycyclohexanone) to 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol)
PCDDNCKO_03815 0.0 iolD 3.7.1.22 E Involved in the cleavage of the C1-C2 bond of 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy- glucuronate (5DG)
PCDDNCKO_03816 5.7e-183 iolC 2.7.1.92 G Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP)
PCDDNCKO_03817 4.4e-157 iolB 5.3.1.30 G Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate)
PCDDNCKO_03818 2.1e-282 iolA 1.2.1.18, 1.2.1.27 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PCDDNCKO_03819 3.1e-136 iolR K COG1349 Transcriptional regulators of sugar metabolism
PCDDNCKO_03820 4.9e-176 iolS C Aldo keto reductase
PCDDNCKO_03821 6.7e-246 csbC EGP Major facilitator Superfamily
PCDDNCKO_03822 0.0 htpG O Molecular chaperone. Has ATPase activity
PCDDNCKO_03824 4.8e-151 IQ Enoyl-(Acyl carrier protein) reductase
PCDDNCKO_03825 1e-102 desR T COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PCDDNCKO_03826 1.9e-198 desK 2.7.13.3 T Histidine kinase
PCDDNCKO_03827 1.9e-200 des 1.14.19.23, 1.14.19.45 I fatty acid desaturase
PCDDNCKO_03828 9.2e-217 yxbF K Bacterial regulatory proteins, tetR family
PCDDNCKO_03829 9.6e-250 alkH 1.2.1.3 C Belongs to the aldehyde dehydrogenase family
PCDDNCKO_03830 2.8e-142 S PQQ-like domain
PCDDNCKO_03831 8.6e-64 S Family of unknown function (DUF5391)
PCDDNCKO_03832 7.8e-51 arsR3 K helix_turn_helix, Arsenical Resistance Operon Repressor
PCDDNCKO_03833 2.5e-201 EGP Major facilitator Superfamily
PCDDNCKO_03834 7.6e-74 yxaI S membrane protein domain
PCDDNCKO_03835 2e-126 E Ring-cleavage extradiol dioxygenase
PCDDNCKO_03836 1.3e-21 3.4.24.84 O metalloendopeptidase activity
PCDDNCKO_03837 2.1e-91 mrr V Mrr N-terminal domain
PCDDNCKO_03838 7.2e-106 ahpC 1.11.1.15 O Alkyl hydroperoxide reductase
PCDDNCKO_03839 2.3e-287 ahpF O Alkyl hydroperoxide reductase
PCDDNCKO_03840 2.8e-227 XK27_00240 S Fic/DOC family
PCDDNCKO_03841 9.3e-245 aapA E COG1113 Gamma-aminobutyrate permease and related permeases
PCDDNCKO_03842 0.0 fbp 3.1.3.11 G Firmicute fructose-1,6-bisphosphatase
PCDDNCKO_03843 9.8e-85 pucE 1.2.5.3, 1.3.99.16 C COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs
PCDDNCKO_03844 8.9e-153 1.2.5.3 C COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM homologs
PCDDNCKO_03845 0.0 C COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs
PCDDNCKO_03846 1.5e-88 pucB 1.1.1.328, 1.17.1.4, 2.7.7.76 S MobA-like NTP transferase domain
PCDDNCKO_03847 2.7e-188 pucA 1.17.1.4 O COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
PCDDNCKO_03848 5.5e-181 S Fusaric acid resistance protein-like
PCDDNCKO_03849 7.2e-18
PCDDNCKO_03850 0.0 L AAA domain
PCDDNCKO_03851 9.5e-179 S Protein of unknown function DUF262
PCDDNCKO_03852 2.8e-140 S FRG
PCDDNCKO_03853 9.8e-80 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PCDDNCKO_03854 7.9e-08 S YyzF-like protein
PCDDNCKO_03857 2.1e-216 yycP
PCDDNCKO_03858 1.2e-132 yycO S Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
PCDDNCKO_03859 3.1e-181 C oxidoreductases (related to aryl-alcohol dehydrogenases)
PCDDNCKO_03860 3.1e-86 yycN 2.3.1.128 K Acetyltransferase
PCDDNCKO_03862 1.2e-200 S Histidine kinase
PCDDNCKO_03863 1.8e-167 rocF 3.5.3.1, 3.5.3.11 E Belongs to the arginase family
PCDDNCKO_03864 1e-257 rocE E amino acid
PCDDNCKO_03865 5.1e-234 rocD 2.6.1.11, 2.6.1.13, 2.6.1.17 E Catalyzes the interconversion of ornithine to glutamate semialdehyde
PCDDNCKO_03866 1.8e-259 rocR KT COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
PCDDNCKO_03867 2e-145 1.14.11.27 P peptidyl-arginine hydroxylation
PCDDNCKO_03868 3e-306 S ABC transporter
PCDDNCKO_03869 2.6e-198 S Major Facilitator Superfamily
PCDDNCKO_03870 1.8e-261
PCDDNCKO_03871 5.4e-189 2.7.7.73, 2.7.7.80 H ThiF family
PCDDNCKO_03872 4.1e-251 phoR3 2.7.13.3 T COG0642 Signal transduction histidine kinase
PCDDNCKO_03873 2.2e-93 K PFAM response regulator receiver
PCDDNCKO_03874 1.2e-62 S Peptidase propeptide and YPEB domain
PCDDNCKO_03875 3.9e-218 htrA 3.4.21.107 O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PCDDNCKO_03876 3.9e-150 vicX 3.1.26.11 S COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I
PCDDNCKO_03877 1.9e-150 yycI S protein conserved in bacteria
PCDDNCKO_03878 1.6e-260 yycH S protein conserved in bacteria
PCDDNCKO_03879 0.0 vicK 2.7.13.3 T Histidine kinase
PCDDNCKO_03880 1.1e-132 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PCDDNCKO_03885 3e-248 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PCDDNCKO_03886 1.1e-71 yycE 3.4.21.26, 5.3.1.24 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PCDDNCKO_03887 2.8e-252 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PCDDNCKO_03888 6.1e-28 yycD S Uncharacterized protein conserved in bacteria (DUF2188)
PCDDNCKO_03890 4.6e-17 yycC K YycC-like protein
PCDDNCKO_03891 4.8e-261 yycA M COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PCDDNCKO_03892 1.9e-239 M Glycosyltransferase Family 4
PCDDNCKO_03893 2.4e-203 S Ecdysteroid kinase
PCDDNCKO_03894 7.7e-235 S Carbamoyl-phosphate synthase L chain, ATP binding domain
PCDDNCKO_03895 1.1e-234 M Glycosyltransferase Family 4
PCDDNCKO_03896 2.7e-120 S GlcNAc-PI de-N-acetylase
PCDDNCKO_03897 1.8e-88 KLT COG0515 Serine threonine protein kinase
PCDDNCKO_03898 4.9e-73 rplI J binds to the 23S rRNA
PCDDNCKO_03899 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PCDDNCKO_03900 7.8e-158 yybS S membrane
PCDDNCKO_03902 7.2e-84 cotF M Spore coat protein
PCDDNCKO_03903 2.8e-66 ydeP3 K Transcriptional regulator
PCDDNCKO_03904 9.5e-164 ppaC 3.6.1.1 C Inorganic pyrophosphatase
PCDDNCKO_03905 1.3e-154 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PCDDNCKO_03906 6.5e-273 sacB 2.4.1.10 GH68 M levansucrase activity
PCDDNCKO_03907 2.7e-310 levB 3.2.1.26, 3.2.1.64, 3.2.1.65 GH32 G Belongs to the glycosyl hydrolase 32 family
PCDDNCKO_03908 2.6e-115 K FCD domain
PCDDNCKO_03909 1.6e-75 dinB S PFAM DinB family protein
PCDDNCKO_03910 1.2e-161 G Major Facilitator Superfamily
PCDDNCKO_03911 1.3e-78 eamA1 EG spore germination
PCDDNCKO_03912 2.4e-54 ypaA S Protein of unknown function (DUF1304)
PCDDNCKO_03913 9.6e-115 drgA C nitroreductase
PCDDNCKO_03914 4.1e-69 ydgJ K Winged helix DNA-binding domain
PCDDNCKO_03915 3.8e-154 yqfU S Uncharacterized protein conserved in bacteria (DUF2179)
PCDDNCKO_03916 1e-76 yybA 2.3.1.57 K transcriptional
PCDDNCKO_03917 2.7e-76 yjcF S Acetyltransferase (GNAT) domain
PCDDNCKO_03918 2.6e-163 eaeH M Domain of Unknown Function (DUF1259)
PCDDNCKO_03919 6.4e-42 3.1.3.18 S glycolate biosynthetic process
PCDDNCKO_03920 1.7e-46 mutT 3.6.1.55 F Belongs to the Nudix hydrolase family
PCDDNCKO_03921 4.5e-97
PCDDNCKO_03922 3.5e-66 S Leucine-rich repeat (LRR) protein
PCDDNCKO_03923 4.2e-19
PCDDNCKO_03924 1.6e-68 isp O Belongs to the peptidase S8 family
PCDDNCKO_03925 9.4e-251 ydfD K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PCDDNCKO_03926 3.8e-130 ydfC EG EamA-like transporter family
PCDDNCKO_03927 1.2e-121 ydhJ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PCDDNCKO_03929 5.9e-27 yyaL O COG1331 Highly conserved protein containing a thioredoxin domain
PCDDNCKO_03930 3.9e-113 K Bacterial transcription activator, effector binding domain
PCDDNCKO_03931 5.2e-98 S Protein of unknown function (DUF554)
PCDDNCKO_03932 1.2e-21 yyaL O Highly conserved protein containing a thioredoxin domain
PCDDNCKO_03933 0.0 yyaL O COG1331 Highly conserved protein containing a thioredoxin domain
PCDDNCKO_03934 3.5e-163 yyaK S CAAX protease self-immunity
PCDDNCKO_03935 3.4e-247 ydjK G Sugar (and other) transporter
PCDDNCKO_03936 6e-64 yyaH 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PCDDNCKO_03937 5.2e-178 ccpB 3.5.1.4, 5.1.1.1 K Transcriptional regulator
PCDDNCKO_03938 2.2e-38 xth 3.1.11.2 L exodeoxyribonuclease III
PCDDNCKO_03939 5.8e-100 adaB 2.1.1.63, 3.2.2.21 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PCDDNCKO_03940 9.7e-106 adaA 3.2.2.21 K Transcriptional regulator
PCDDNCKO_03941 3e-37 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PCDDNCKO_03942 3.8e-69 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PCDDNCKO_03943 7.3e-46 rpsF J Binds together with S18 to 16S ribosomal RNA
PCDDNCKO_03944 2.6e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PCDDNCKO_03945 0.0 yyaE C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PCDDNCKO_03946 2.3e-33 yyzM S protein conserved in bacteria
PCDDNCKO_03947 4.4e-175 yyaD S Membrane
PCDDNCKO_03948 1e-62 4.2.1.103 K FR47-like protein
PCDDNCKO_03949 6.2e-111 yyaC S Sporulation protein YyaC
PCDDNCKO_03950 3e-148 spo0J K Belongs to the ParB family
PCDDNCKO_03951 1.2e-135 soj D COG1192 ATPases involved in chromosome partitioning
PCDDNCKO_03952 1.1e-150 noc D Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage
PCDDNCKO_03953 4.2e-127 rsmG 2.1.1.170 J Specifically methylates the N7 position of guanine in position 535 of 16S rRNA
PCDDNCKO_03954 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PCDDNCKO_03955 8.9e-251 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PCDDNCKO_03956 3.5e-109 jag S single-stranded nucleic acid binding R3H
PCDDNCKO_03957 1.9e-133 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PCDDNCKO_03958 5.2e-54 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)