ORF_ID e_value Gene_name EC_number CAZy COGs Description
AFCCPELF_00001 2.8e-238 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
AFCCPELF_00002 1.4e-234 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
AFCCPELF_00003 3.6e-108 engB D Necessary for normal cell division and for the maintenance of normal septation
AFCCPELF_00004 6.1e-60 MA20_27270 S mazG nucleotide pyrophosphohydrolase
AFCCPELF_00005 1.3e-08
AFCCPELF_00006 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
AFCCPELF_00007 4e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
AFCCPELF_00008 1.3e-176 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
AFCCPELF_00009 6.5e-156 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
AFCCPELF_00010 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
AFCCPELF_00011 2.7e-91 apt 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
AFCCPELF_00012 2.1e-87
AFCCPELF_00014 1.8e-124 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AFCCPELF_00015 2.4e-212 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
AFCCPELF_00016 4.7e-114 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
AFCCPELF_00017 1.3e-35 ynzC S UPF0291 protein
AFCCPELF_00018 9.8e-30 yneF S Uncharacterised protein family (UPF0154)
AFCCPELF_00019 4.6e-117 plsC 2.3.1.51 I Acyltransferase
AFCCPELF_00020 6.4e-142 yabB 2.1.1.223 L Methyltransferase small domain
AFCCPELF_00021 5.4e-49 yazA L GIY-YIG catalytic domain protein
AFCCPELF_00022 4.4e-183 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AFCCPELF_00023 1.2e-143 rpsB J Belongs to the universal ribosomal protein uS2 family
AFCCPELF_00024 2.4e-153 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
AFCCPELF_00025 2e-129 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
AFCCPELF_00026 2.2e-94 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
AFCCPELF_00027 9.3e-141 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
AFCCPELF_00028 1.3e-137 cdsA 2.7.7.41 I Belongs to the CDS family
AFCCPELF_00029 9.2e-234 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
AFCCPELF_00030 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
AFCCPELF_00031 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AFCCPELF_00032 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
AFCCPELF_00033 1e-215 nusA K Participates in both transcription termination and antitermination
AFCCPELF_00034 1e-44 ylxR K Protein of unknown function (DUF448)
AFCCPELF_00035 4.5e-49 ylxQ J ribosomal protein
AFCCPELF_00036 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
AFCCPELF_00037 2.1e-58 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
AFCCPELF_00038 6.2e-168 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
AFCCPELF_00039 4.5e-177 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
AFCCPELF_00040 5.8e-64
AFCCPELF_00041 4.1e-195 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
AFCCPELF_00042 2.3e-75 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
AFCCPELF_00043 0.0 dnaK O Heat shock 70 kDa protein
AFCCPELF_00044 5.1e-199 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
AFCCPELF_00045 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
AFCCPELF_00046 3.5e-224 3.6.4.12 L Belongs to the 'phage' integrase family
AFCCPELF_00047 8.7e-122 V Abi-like protein
AFCCPELF_00049 7e-16
AFCCPELF_00050 1e-56 kch J Ion transport protein
AFCCPELF_00051 2.5e-48 ligA 2.7.7.7, 6.5.1.2 L BRCA1 C Terminus (BRCT) domain
AFCCPELF_00052 4.1e-84 3.4.21.88 K Peptidase S24-like
AFCCPELF_00056 3e-14
AFCCPELF_00059 2.9e-109 L DnaD domain protein
AFCCPELF_00060 1.3e-190 L Belongs to the 'phage' integrase family
AFCCPELF_00061 3.3e-126 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
AFCCPELF_00063 4.8e-70
AFCCPELF_00064 1.7e-134
AFCCPELF_00071 2.1e-69 XK27_00160 S Domain of unknown function (DUF5052)
AFCCPELF_00075 4.2e-83 arpU S Phage transcriptional regulator, ArpU family
AFCCPELF_00077 1.6e-08
AFCCPELF_00078 1.1e-85 L HNH nucleases
AFCCPELF_00079 7.2e-83 L Phage terminase, small subunit
AFCCPELF_00081 1.9e-09
AFCCPELF_00082 0.0 S Phage Terminase
AFCCPELF_00083 1.2e-222 S Phage portal protein
AFCCPELF_00084 1.5e-127 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
AFCCPELF_00085 3.6e-208 S Phage capsid family
AFCCPELF_00086 6.6e-60 S Phage gp6-like head-tail connector protein
AFCCPELF_00087 3.5e-58 S Phage head-tail joining protein
AFCCPELF_00088 3.6e-70 S Bacteriophage HK97-gp10, putative tail-component
AFCCPELF_00089 6.7e-63 S Protein of unknown function (DUF806)
AFCCPELF_00090 9.9e-129 S Phage tail tube protein
AFCCPELF_00091 1.1e-60 S Phage tail assembly chaperone proteins, TAC
AFCCPELF_00092 6.4e-235 M Phage tail tape measure protein TP901
AFCCPELF_00093 9.3e-150 S Phage tail protein
AFCCPELF_00094 1.3e-292 M Prophage endopeptidase tail
AFCCPELF_00095 1.5e-36
AFCCPELF_00097 3e-41 S Domain of unknown function (DUF2479)
AFCCPELF_00101 4.5e-07 3.2.1.15 M Right handed beta helix region
AFCCPELF_00105 5.3e-15
AFCCPELF_00106 5.2e-64 S Bacteriophage holin of superfamily 6 (Holin_LLH)
AFCCPELF_00107 4.7e-202 3.5.1.104 M hydrolase, family 25
AFCCPELF_00108 2e-30
AFCCPELF_00109 1.1e-89 K IrrE N-terminal-like domain
AFCCPELF_00110 1.5e-274 pipD E Dipeptidase
AFCCPELF_00111 4.7e-199 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
AFCCPELF_00113 8.7e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
AFCCPELF_00115 1.5e-225 S cog cog1373
AFCCPELF_00116 4.8e-176 coaA 2.7.1.33 F Pantothenic acid kinase
AFCCPELF_00117 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
AFCCPELF_00118 4.7e-157 EG EamA-like transporter family
AFCCPELF_00119 2.8e-36 Q pyridine nucleotide-disulphide oxidoreductase
AFCCPELF_00120 0.0 helD 3.6.4.12 L DNA helicase
AFCCPELF_00121 1.2e-115 dedA S SNARE associated Golgi protein
AFCCPELF_00122 4.2e-126 3.1.3.73 G phosphoglycerate mutase
AFCCPELF_00123 7.5e-228 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AFCCPELF_00124 6.6e-35 S Transglycosylase associated protein
AFCCPELF_00126 5.5e-181 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AFCCPELF_00127 5.7e-215 V domain protein
AFCCPELF_00128 1.6e-94 K Transcriptional regulator (TetR family)
AFCCPELF_00129 5.8e-39 pspC KT PspC domain protein
AFCCPELF_00130 8.3e-151
AFCCPELF_00131 4e-17 3.2.1.14 GH18
AFCCPELF_00132 1.5e-82 zur P Belongs to the Fur family
AFCCPELF_00133 1.9e-101 gmk2 2.7.4.8 F Guanylate kinase
AFCCPELF_00134 1.2e-73 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
AFCCPELF_00135 6e-255 yfnA E Amino Acid
AFCCPELF_00136 7.2e-234 EGP Sugar (and other) transporter
AFCCPELF_00137 2e-228
AFCCPELF_00138 4.3e-208 potD P ABC transporter
AFCCPELF_00139 2.5e-139 potC P ABC transporter permease
AFCCPELF_00140 4.5e-146 potB P ABC transporter permease
AFCCPELF_00141 2e-205 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
AFCCPELF_00142 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
AFCCPELF_00143 1.1e-177 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
AFCCPELF_00144 0.0 pacL 3.6.3.8 P P-type ATPase
AFCCPELF_00145 3.4e-85 dps P Belongs to the Dps family
AFCCPELF_00146 2.8e-255 yagE E amino acid
AFCCPELF_00147 2.7e-117 gph 3.1.3.18 S HAD hydrolase, family IA, variant
AFCCPELF_00148 5.1e-49 3.6.4.12 S PD-(D/E)XK nuclease family transposase
AFCCPELF_00149 2.5e-127 L Helix-turn-helix domain
AFCCPELF_00150 6.7e-150 L hmm pf00665
AFCCPELF_00151 1.7e-182 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
AFCCPELF_00152 3.6e-182 iunH2 3.2.2.1 F nucleoside hydrolase
AFCCPELF_00153 2.5e-138 IQ KR domain
AFCCPELF_00154 3.3e-133 S membrane transporter protein
AFCCPELF_00155 3e-96 S ABC-type cobalt transport system, permease component
AFCCPELF_00156 1.6e-247 cbiO1 S ABC transporter, ATP-binding protein
AFCCPELF_00157 1.8e-113 P Cobalt transport protein
AFCCPELF_00158 1.6e-52 yvlA
AFCCPELF_00159 0.0 yjcE P Sodium proton antiporter
AFCCPELF_00160 2.2e-52 ypaA S Protein of unknown function (DUF1304)
AFCCPELF_00161 3.7e-190 D Alpha beta
AFCCPELF_00162 1e-72 K Transcriptional regulator
AFCCPELF_00163 1.1e-161
AFCCPELF_00164 2.6e-180 1.6.5.5 C Zinc-binding dehydrogenase
AFCCPELF_00165 1.3e-257 G PTS system Galactitol-specific IIC component
AFCCPELF_00166 1.4e-212 EGP Major facilitator Superfamily
AFCCPELF_00176 2e-48 L PFAM transposase IS200-family protein
AFCCPELF_00181 1.5e-180 rihA 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
AFCCPELF_00182 1.2e-194 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AFCCPELF_00183 1.2e-95 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
AFCCPELF_00184 2.5e-225 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
AFCCPELF_00185 3.9e-78 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
AFCCPELF_00186 2.4e-101 T Ion transport 2 domain protein
AFCCPELF_00187 0.0 S Bacterial membrane protein YfhO
AFCCPELF_00188 5e-202 G Transporter, major facilitator family protein
AFCCPELF_00189 5.4e-109 yvrI K sigma factor activity
AFCCPELF_00190 3.5e-64 ydiI Q Thioesterase superfamily
AFCCPELF_00191 5.8e-157 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
AFCCPELF_00192 1.5e-272 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
AFCCPELF_00193 5.5e-19
AFCCPELF_00194 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
AFCCPELF_00195 4.2e-32 feoA P FeoA domain
AFCCPELF_00196 6.5e-145 sufC O FeS assembly ATPase SufC
AFCCPELF_00197 1.1e-237 sufD O FeS assembly protein SufD
AFCCPELF_00198 2.8e-235 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AFCCPELF_00199 6.5e-81 nifU C SUF system FeS assembly protein, NifU family
AFCCPELF_00200 1.6e-271 sufB O assembly protein SufB
AFCCPELF_00201 3.6e-57 yitW S Iron-sulfur cluster assembly protein
AFCCPELF_00202 6.1e-160 hipB K Helix-turn-helix
AFCCPELF_00203 9.8e-115 nreC K PFAM regulatory protein LuxR
AFCCPELF_00204 9.2e-39 S Cytochrome B5
AFCCPELF_00205 5.8e-157 yitU 3.1.3.104 S hydrolase
AFCCPELF_00206 6.8e-259 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
AFCCPELF_00207 4e-148 f42a O Band 7 protein
AFCCPELF_00208 8e-124 lytS 2.7.13.3 T LytS YhcK-type transmembrane receptor domain protein
AFCCPELF_00209 3.7e-182 lytS 2.7.13.3 T LytS YhcK-type transmembrane receptor domain protein
AFCCPELF_00210 2.4e-130 lytT K response regulator receiver
AFCCPELF_00211 1.9e-66 lrgA S LrgA family
AFCCPELF_00212 2.6e-124 lrgB M LrgB-like family
AFCCPELF_00213 1.2e-177 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
AFCCPELF_00214 1.9e-169 scrK 2.7.1.2, 2.7.1.4 GK ROK family
AFCCPELF_00215 4.2e-189 galR K Periplasmic binding protein-like domain
AFCCPELF_00216 0.0 rafA 3.2.1.22 G alpha-galactosidase
AFCCPELF_00217 3.8e-87 S Protein of unknown function (DUF1440)
AFCCPELF_00218 1.7e-193 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
AFCCPELF_00219 4.2e-214 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
AFCCPELF_00220 4.6e-169 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
AFCCPELF_00221 2e-172 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
AFCCPELF_00222 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
AFCCPELF_00223 2.9e-85 ypmB S Protein conserved in bacteria
AFCCPELF_00224 3e-125 dnaD L DnaD domain protein
AFCCPELF_00225 2e-161 EG EamA-like transporter family
AFCCPELF_00228 0.0 sbcC L Putative exonuclease SbcCD, C subunit
AFCCPELF_00229 2.2e-207 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
AFCCPELF_00230 5.6e-177 M Glycosyl hydrolases family 25
AFCCPELF_00231 1.4e-144 ywqE 3.1.3.48 GM PHP domain protein
AFCCPELF_00232 0.0 snf 2.7.11.1 KL domain protein
AFCCPELF_00233 3.3e-06 D nuclear chromosome segregation
AFCCPELF_00234 1.2e-36
AFCCPELF_00235 1.2e-64 T Toxin-antitoxin system, toxin component, MazF family
AFCCPELF_00237 1.5e-250 mmuP E amino acid
AFCCPELF_00238 1.8e-170 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
AFCCPELF_00240 3.6e-56 L nuclease
AFCCPELF_00241 2.1e-166 rihA F Inosine-uridine preferring nucleoside hydrolase
AFCCPELF_00243 4.3e-201 nupC F Na+ dependent nucleoside transporter C-terminus
AFCCPELF_00244 2.3e-183 1.1.1.1 C alcohol dehydrogenase
AFCCPELF_00245 1.1e-70 S Membrane
AFCCPELF_00246 6.3e-120 trpF 5.3.1.24 E belongs to the TrpF family
AFCCPELF_00247 1e-149 yeiI 2.7.1.15, 2.7.1.45, 2.7.1.83 G Phosphomethylpyrimidine kinase
AFCCPELF_00248 1.7e-257 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
AFCCPELF_00249 1.4e-139 psuK 2.7.1.15, 2.7.1.45, 2.7.1.83 GK Winged helix-turn-helix DNA-binding
AFCCPELF_00251 3.6e-84 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AFCCPELF_00252 2.4e-35 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
AFCCPELF_00253 1.3e-35
AFCCPELF_00254 8.9e-173 L PFAM Integrase catalytic region
AFCCPELF_00255 5.6e-121 O Bacterial dnaA protein
AFCCPELF_00256 2.4e-12 pgdA 3.5.1.104 G polysaccharide deacetylase
AFCCPELF_00257 2e-271 xylA 5.3.1.5 G Belongs to the xylose isomerase family
AFCCPELF_00258 1.8e-300 xylB 2.7.1.17 G Belongs to the FGGY kinase family
AFCCPELF_00259 8.1e-154 KT YcbB domain
AFCCPELF_00260 3.4e-191 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AFCCPELF_00261 4.3e-172 arcC 2.7.2.2 E Belongs to the carbamate kinase family
AFCCPELF_00262 3.3e-161 EG EamA-like transporter family
AFCCPELF_00263 4.5e-103 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
AFCCPELF_00264 1.3e-55 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
AFCCPELF_00265 6.3e-50 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
AFCCPELF_00266 0.0 copA 3.6.3.54 P P-type ATPase
AFCCPELF_00267 1.7e-84
AFCCPELF_00269 5.2e-56
AFCCPELF_00270 1.6e-74 yjcE P Sodium proton antiporter
AFCCPELF_00271 1.9e-159 yjcE P Sodium proton antiporter
AFCCPELF_00273 5.9e-91
AFCCPELF_00276 3.2e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
AFCCPELF_00277 1.7e-82 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
AFCCPELF_00278 9e-209 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
AFCCPELF_00279 6.2e-246 M Glycosyl transferase family group 2
AFCCPELF_00281 3.3e-225 aadAT EK Aminotransferase, class I
AFCCPELF_00282 3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
AFCCPELF_00283 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
AFCCPELF_00284 3.4e-97 nusG K Participates in transcription elongation, termination and antitermination
AFCCPELF_00285 2.2e-16 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
AFCCPELF_00286 1.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
AFCCPELF_00287 2.3e-136 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AFCCPELF_00288 2.1e-70 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
AFCCPELF_00289 1.7e-273 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
AFCCPELF_00290 1.7e-207 yacL S domain protein
AFCCPELF_00291 2.3e-254 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
AFCCPELF_00292 2e-97 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
AFCCPELF_00293 1.5e-49 HA62_12640 S GCN5-related N-acetyl-transferase
AFCCPELF_00294 2.6e-126 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
AFCCPELF_00295 5.1e-267 pepC 3.4.22.40 E Peptidase C1-like family
AFCCPELF_00296 2.1e-140 tcyA ET Belongs to the bacterial solute-binding protein 3 family
AFCCPELF_00297 6.3e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
AFCCPELF_00298 2.4e-119 tcyB E ABC transporter
AFCCPELF_00299 4.2e-214 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
AFCCPELF_00300 3.1e-169 I alpha/beta hydrolase fold
AFCCPELF_00301 1.2e-134 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AFCCPELF_00302 0.0 S Bacterial membrane protein, YfhO
AFCCPELF_00303 1.3e-184 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
AFCCPELF_00304 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
AFCCPELF_00306 9.6e-85 ydcK S Belongs to the SprT family
AFCCPELF_00307 0.0 yhgF K Tex-like protein N-terminal domain protein
AFCCPELF_00308 5.1e-153 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
AFCCPELF_00309 1.7e-284 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AFCCPELF_00310 1.8e-127 gntR1 K UbiC transcription regulator-associated domain protein
AFCCPELF_00311 1.4e-133 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
AFCCPELF_00312 9.5e-300 aspT P Predicted Permease Membrane Region
AFCCPELF_00313 2.8e-252 EGP Major facilitator Superfamily
AFCCPELF_00314 5.5e-110
AFCCPELF_00317 1.4e-158 yjjH S Calcineurin-like phosphoesterase
AFCCPELF_00318 5e-263 dtpT U amino acid peptide transporter
AFCCPELF_00319 3.7e-19
AFCCPELF_00321 3.7e-91 yqiG C Oxidoreductase
AFCCPELF_00322 7.8e-20 yqiG C Oxidoreductase
AFCCPELF_00323 1.1e-50 yqiG C Oxidoreductase
AFCCPELF_00324 8.5e-54 S macrophage migration inhibitory factor
AFCCPELF_00325 2.4e-65 K HxlR-like helix-turn-helix
AFCCPELF_00326 2.1e-88 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
AFCCPELF_00328 0.0 I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AFCCPELF_00329 5.5e-158 endA V DNA/RNA non-specific endonuclease
AFCCPELF_00330 1e-254 yifK E Amino acid permease
AFCCPELF_00332 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AFCCPELF_00333 1.3e-229 N Uncharacterized conserved protein (DUF2075)
AFCCPELF_00334 4.6e-123 S SNARE associated Golgi protein
AFCCPELF_00335 0.0 uvrA3 L excinuclease ABC, A subunit
AFCCPELF_00336 9.1e-56 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AFCCPELF_00337 1.2e-59 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
AFCCPELF_00338 8.3e-69 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
AFCCPELF_00339 9.6e-144 S DUF218 domain
AFCCPELF_00340 0.0 ubiB S ABC1 family
AFCCPELF_00341 2.1e-244 yhdP S Transporter associated domain
AFCCPELF_00342 5e-75 copY K Copper transport repressor CopY TcrY
AFCCPELF_00343 1.3e-244 EGP Major facilitator Superfamily
AFCCPELF_00344 1e-73 yeaL S UPF0756 membrane protein
AFCCPELF_00345 5.6e-79 yphH S Cupin domain
AFCCPELF_00346 3.2e-83 C Flavodoxin
AFCCPELF_00347 1.1e-158 K LysR substrate binding domain protein
AFCCPELF_00348 1.1e-169 1.1.1.346 C Aldo keto reductase
AFCCPELF_00349 2.1e-39 gcvR T Belongs to the UPF0237 family
AFCCPELF_00350 3.2e-72 XK27_08635 S UPF0210 protein
AFCCPELF_00351 5.1e-151 XK27_08635 S UPF0210 protein
AFCCPELF_00352 1.5e-94 K Acetyltransferase (GNAT) domain
AFCCPELF_00353 1.2e-160 S Alpha beta hydrolase
AFCCPELF_00354 1.1e-158 gspA M family 8
AFCCPELF_00355 2.3e-119 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
AFCCPELF_00356 3.8e-93
AFCCPELF_00357 1.9e-161 degV S EDD domain protein, DegV family
AFCCPELF_00358 0.0 FbpA K Fibronectin-binding protein
AFCCPELF_00359 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
AFCCPELF_00360 2.1e-207 carA 6.3.5.5 F Belongs to the CarA family
AFCCPELF_00361 3.8e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
AFCCPELF_00362 2.9e-70 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
AFCCPELF_00363 1.5e-65 esbA S Family of unknown function (DUF5322)
AFCCPELF_00364 8.4e-69 rnhA 3.1.26.4 L Ribonuclease HI
AFCCPELF_00365 5.6e-222 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
AFCCPELF_00366 1.1e-83 F Belongs to the NrdI family
AFCCPELF_00367 1.7e-44 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
AFCCPELF_00368 1.6e-105 ypsA S Belongs to the UPF0398 family
AFCCPELF_00369 4.4e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
AFCCPELF_00370 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
AFCCPELF_00371 2.7e-76
AFCCPELF_00372 1.4e-178
AFCCPELF_00373 7.2e-181 fecB P Periplasmic binding protein
AFCCPELF_00374 1.4e-139 fecE 3.6.3.34 HP AAA domain, putative AbiEii toxin, Type IV TA system
AFCCPELF_00375 1.8e-128 fecD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AFCCPELF_00376 1.5e-77 S Flavodoxin
AFCCPELF_00377 3.7e-64 moaE 2.8.1.12 H MoaE protein
AFCCPELF_00378 4.9e-35 moaD 2.8.1.12 H ThiS family
AFCCPELF_00379 3.9e-218 narK P Transporter, major facilitator family protein
AFCCPELF_00380 2.9e-165 hepT 2.5.1.30, 2.5.1.90 H geranyltranstransferase activity
AFCCPELF_00381 3.6e-182
AFCCPELF_00382 4.6e-18
AFCCPELF_00383 2.3e-116 nreC K PFAM regulatory protein LuxR
AFCCPELF_00384 3e-190 comP 2.7.13.3 F Sensor histidine kinase
AFCCPELF_00385 3e-44
AFCCPELF_00386 4.7e-105 mobA 2.7.7.77 H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
AFCCPELF_00387 5.1e-84 mobB 2.10.1.1, 2.7.7.77 H molybdopterin-guanine dinucleotide biosynthesis protein
AFCCPELF_00388 1.4e-228 moeA 2.10.1.1 H MoeA N-terminal region (domain I and II)
AFCCPELF_00389 3.1e-84 moaB 2.7.7.75 H May be involved in the biosynthesis of molybdopterin
AFCCPELF_00390 8.8e-187 moeB 2.7.7.73, 2.7.7.80 H ThiF family
AFCCPELF_00391 0.0 narG 1.7.5.1 C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
AFCCPELF_00392 0.0 narH 1.7.5.1 C 4Fe-4S dicluster domain
AFCCPELF_00393 2.7e-100 narJ C nitrate reductase molybdenum cofactor assembly chaperone
AFCCPELF_00394 2.5e-129 narI 1.7.5.1 C Nitrate reductase
AFCCPELF_00395 1.2e-233 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
AFCCPELF_00396 1.2e-152 EG EamA-like transporter family
AFCCPELF_00397 2.5e-118 L Integrase
AFCCPELF_00398 1.4e-158 rssA S Phospholipase, patatin family
AFCCPELF_00399 9.9e-242 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
AFCCPELF_00400 2.8e-199 xerS L Belongs to the 'phage' integrase family
AFCCPELF_00402 6.6e-72 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
AFCCPELF_00403 4.2e-77 marR K Transcriptional regulator, MarR family
AFCCPELF_00404 3e-176 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
AFCCPELF_00405 7.2e-34 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
AFCCPELF_00406 2.7e-158 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
AFCCPELF_00407 1.6e-129 IQ reductase
AFCCPELF_00408 1e-221 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
AFCCPELF_00409 2.6e-74 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
AFCCPELF_00410 1.9e-74 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
AFCCPELF_00411 8.8e-259 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
AFCCPELF_00412 5.5e-142 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
AFCCPELF_00413 8.8e-139 accA 2.1.3.15, 6.4.1.2 I alpha subunit
AFCCPELF_00414 1.1e-130 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
AFCCPELF_00417 2.3e-162
AFCCPELF_00418 2.9e-159 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
AFCCPELF_00419 2.8e-170 S AI-2E family transporter
AFCCPELF_00420 2.8e-134 XK27_07210 6.1.1.6 S B3 4 domain
AFCCPELF_00421 1.1e-77 yybA 2.3.1.57 K Transcriptional regulator
AFCCPELF_00422 3.6e-91 M1-874 K Domain of unknown function (DUF1836)
AFCCPELF_00423 4.8e-88 GM epimerase
AFCCPELF_00424 1.7e-154 ypdB V (ABC) transporter
AFCCPELF_00425 6.2e-241 yhdP S Transporter associated domain
AFCCPELF_00426 9.9e-85 nrdI F Belongs to the NrdI family
AFCCPELF_00427 3.2e-74 S 3-demethylubiquinone-9 3-methyltransferase
AFCCPELF_00428 3.1e-193 yeaN P Transporter, major facilitator family protein
AFCCPELF_00429 2.2e-287 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AFCCPELF_00430 3.2e-275 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
AFCCPELF_00431 1.8e-38
AFCCPELF_00432 0.0 lacS G Transporter
AFCCPELF_00433 6.3e-229 L transposase, IS605 OrfB family
AFCCPELF_00434 1.1e-59 L PFAM transposase IS200-family protein
AFCCPELF_00435 3.7e-56 ltrA S Bacterial low temperature requirement A protein (LtrA)
AFCCPELF_00436 1e-44 ltrA S Bacterial low temperature requirement A protein (LtrA)
AFCCPELF_00437 1.5e-80 uspA T universal stress protein
AFCCPELF_00438 1.5e-80 K AsnC family
AFCCPELF_00439 1e-232 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
AFCCPELF_00440 9.5e-96 dedA 3.1.3.1 S SNARE associated Golgi protein
AFCCPELF_00441 2e-180 galR K Transcriptional regulator
AFCCPELF_00442 2.2e-284 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
AFCCPELF_00443 7.2e-225 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
AFCCPELF_00444 8.6e-184 celE 3.2.1.4 GH5,GH9 E GDSL-like Lipase/Acylhydrolase family
AFCCPELF_00445 4e-147 ptp3 3.1.3.48 T Tyrosine phosphatase family
AFCCPELF_00446 4.8e-93 yxkA S Phosphatidylethanolamine-binding protein
AFCCPELF_00447 9.1e-36
AFCCPELF_00448 2.6e-52
AFCCPELF_00449 2.3e-204
AFCCPELF_00450 7.5e-83 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
AFCCPELF_00451 8.9e-136 pnuC H nicotinamide mononucleotide transporter
AFCCPELF_00452 3.5e-157 ytbE 1.1.1.346 S Aldo keto reductase
AFCCPELF_00453 1.2e-123 K response regulator
AFCCPELF_00454 1.3e-179 T PhoQ Sensor
AFCCPELF_00455 2.6e-135 macB2 V ABC transporter, ATP-binding protein
AFCCPELF_00456 2.4e-132 ysaB V FtsX-like permease family
AFCCPELF_00457 6.5e-196 ysaB V FtsX-like permease family
AFCCPELF_00458 4.1e-158 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
AFCCPELF_00459 2.2e-168 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
AFCCPELF_00460 0.0 uup S ABC transporter, ATP-binding protein
AFCCPELF_00461 6.8e-181 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AFCCPELF_00462 5.5e-225 mtnE 2.6.1.83 E Aminotransferase
AFCCPELF_00463 2.3e-142 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
AFCCPELF_00464 1.4e-136 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
AFCCPELF_00465 1.7e-82 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
AFCCPELF_00466 1.9e-124 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
AFCCPELF_00467 3.6e-132 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AFCCPELF_00468 8.6e-198 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
AFCCPELF_00469 1.5e-103 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
AFCCPELF_00470 2.8e-126 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
AFCCPELF_00471 4.2e-194 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
AFCCPELF_00472 6.9e-173 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
AFCCPELF_00473 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
AFCCPELF_00474 1.6e-277 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
AFCCPELF_00475 1.5e-135 fat 3.1.2.21 I Acyl-ACP thioesterase
AFCCPELF_00476 2e-155 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AFCCPELF_00477 5.9e-58 yabA L Involved in initiation control of chromosome replication
AFCCPELF_00478 2.8e-185 holB 2.7.7.7 L DNA polymerase III
AFCCPELF_00479 7.6e-52 yaaQ S Cyclic-di-AMP receptor
AFCCPELF_00480 4.8e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
AFCCPELF_00481 9.7e-39 S Protein of unknown function (DUF2508)
AFCCPELF_00482 3.3e-109 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
AFCCPELF_00483 7e-47 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
AFCCPELF_00484 6.2e-292 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
AFCCPELF_00485 3.5e-91 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
AFCCPELF_00486 3.4e-35 nrdH O Glutaredoxin
AFCCPELF_00487 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AFCCPELF_00488 3.4e-199 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AFCCPELF_00489 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
AFCCPELF_00490 6.4e-126 S Putative adhesin
AFCCPELF_00491 1.6e-82 XK27_06920 S Protein of unknown function (DUF1700)
AFCCPELF_00492 4e-56 K transcriptional regulator PadR family
AFCCPELF_00493 2e-40 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
AFCCPELF_00495 1.2e-230 L Integrase core domain
AFCCPELF_00496 8e-140 IQ reductase
AFCCPELF_00497 3.6e-114 acmC 3.2.1.96 NU mannosyl-glycoprotein
AFCCPELF_00498 3e-99 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
AFCCPELF_00499 1.1e-211 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
AFCCPELF_00500 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
AFCCPELF_00501 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
AFCCPELF_00502 6.2e-202 camS S sex pheromone
AFCCPELF_00503 2.4e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AFCCPELF_00504 1e-276 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
AFCCPELF_00505 1.8e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
AFCCPELF_00506 1.5e-186 yegS 2.7.1.107 G Lipid kinase
AFCCPELF_00507 6.6e-262 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AFCCPELF_00508 1.9e-113 L Mrr N-terminal domain
AFCCPELF_00509 1e-21
AFCCPELF_00510 4.2e-289 L Recombinase
AFCCPELF_00511 1.9e-38 S Protein of unknown function (DUF2815)
AFCCPELF_00512 2.7e-200 L Protein of unknown function (DUF2800)
AFCCPELF_00513 8.8e-27
AFCCPELF_00515 7.8e-150
AFCCPELF_00516 4.4e-25
AFCCPELF_00517 1.3e-90
AFCCPELF_00518 2.5e-116
AFCCPELF_00519 2.4e-37 K Cro/C1-type HTH DNA-binding domain
AFCCPELF_00520 5.9e-247 mod 2.1.1.72, 3.1.21.5 L DNA methylase
AFCCPELF_00521 0.0 res 2.1.1.72, 3.1.21.5 L Type III restriction enzyme, res subunit
AFCCPELF_00522 1.1e-218 K DNA binding
AFCCPELF_00523 0.0 L helicase activity
AFCCPELF_00525 1.8e-240 yhjE EGP MFS transporter, metabolite H symporter (MHS) family protein
AFCCPELF_00526 9.3e-130 IQ Dehydrogenase reductase
AFCCPELF_00527 2.9e-37
AFCCPELF_00528 4.8e-114 ywnB S NAD(P)H-binding
AFCCPELF_00529 1.2e-38 S Cytochrome b5-like Heme/Steroid binding domain
AFCCPELF_00530 3.3e-256 nhaC C Na H antiporter NhaC
AFCCPELF_00531 7.7e-183 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
AFCCPELF_00533 7.9e-102 ydeN S Serine hydrolase
AFCCPELF_00534 4.5e-62 psiE S Phosphate-starvation-inducible E
AFCCPELF_00535 5e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
AFCCPELF_00537 2.6e-177 S Aldo keto reductase
AFCCPELF_00538 9.9e-75 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I PAP2 superfamily
AFCCPELF_00539 0.0 L Helicase C-terminal domain protein
AFCCPELF_00541 3.2e-253 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
AFCCPELF_00542 3.3e-55 S Sugar efflux transporter for intercellular exchange
AFCCPELF_00543 2.1e-126
AFCCPELF_00544 8.2e-110 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
AFCCPELF_00545 0.0 cadA P P-type ATPase
AFCCPELF_00546 3.3e-217 5.4.2.7 G Metalloenzyme superfamily
AFCCPELF_00548 4.8e-154 1.6.5.2 GM NAD(P)H-binding
AFCCPELF_00549 9e-75 K Transcriptional regulator
AFCCPELF_00550 2.3e-162 proX M ABC transporter, substrate-binding protein, QAT family
AFCCPELF_00551 6.3e-109 proWZ P ABC transporter permease
AFCCPELF_00552 5.1e-139 proV E ABC transporter, ATP-binding protein
AFCCPELF_00553 4.5e-104 proW P ABC transporter, permease protein
AFCCPELF_00554 6.9e-77 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
AFCCPELF_00555 1.2e-252 clcA P chloride
AFCCPELF_00556 7e-217 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
AFCCPELF_00557 3.1e-103 metI P ABC transporter permease
AFCCPELF_00558 4.7e-191 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
AFCCPELF_00559 2.8e-154 metQ1 P Belongs to the nlpA lipoprotein family
AFCCPELF_00560 1.8e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
AFCCPELF_00561 1.4e-113 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
AFCCPELF_00563 1.1e-43 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
AFCCPELF_00564 1.9e-292 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
AFCCPELF_00565 8.2e-82 S YbaK proline--tRNA ligase associated domain protein
AFCCPELF_00566 4.3e-305 ybeC E amino acid
AFCCPELF_00567 0.0 ydaO E amino acid
AFCCPELF_00568 9.2e-40
AFCCPELF_00569 7.4e-68 rmaI K Transcriptional regulator
AFCCPELF_00570 1.6e-236 EGP Major facilitator Superfamily
AFCCPELF_00571 2.9e-111 yvyE 3.4.13.9 S YigZ family
AFCCPELF_00572 1.4e-256 comFA L Helicase C-terminal domain protein
AFCCPELF_00573 1.3e-114 comFC S Competence protein
AFCCPELF_00574 3.8e-96 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AFCCPELF_00575 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
AFCCPELF_00576 1.7e-187 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AFCCPELF_00577 3.1e-32 KT PspC domain protein
AFCCPELF_00578 4.9e-52 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
AFCCPELF_00579 4.6e-177 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
AFCCPELF_00580 2.2e-156 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
AFCCPELF_00581 1.8e-184 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
AFCCPELF_00582 5.7e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
AFCCPELF_00583 3.9e-136 yrjD S LUD domain
AFCCPELF_00584 7.5e-288 lutB C 4Fe-4S dicluster domain
AFCCPELF_00585 3.5e-163 lutA C Cysteine-rich domain
AFCCPELF_00586 5e-173 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
AFCCPELF_00587 3.8e-218 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
AFCCPELF_00588 1.3e-157 aatB ET PFAM extracellular solute-binding protein, family 3
AFCCPELF_00589 1.6e-88 ykhA 3.1.2.20 I Thioesterase superfamily
AFCCPELF_00590 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
AFCCPELF_00591 2.3e-116 yfbR S HD containing hydrolase-like enzyme
AFCCPELF_00592 1.5e-13
AFCCPELF_00593 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
AFCCPELF_00594 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
AFCCPELF_00595 1.2e-244 steT E amino acid
AFCCPELF_00596 3.2e-161 rapZ S Displays ATPase and GTPase activities
AFCCPELF_00597 1.4e-186 ybhK S Required for morphogenesis under gluconeogenic growth conditions
AFCCPELF_00598 4e-170 whiA K May be required for sporulation
AFCCPELF_00600 8.8e-15
AFCCPELF_00601 2.1e-103 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
AFCCPELF_00603 1.1e-189 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
AFCCPELF_00604 2.4e-228 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
AFCCPELF_00605 4.8e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
AFCCPELF_00606 4.2e-250 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
AFCCPELF_00607 7.1e-248 yifK E Amino acid permease
AFCCPELF_00608 2.6e-291 clcA P chloride
AFCCPELF_00609 1.8e-34 secG U Preprotein translocase
AFCCPELF_00610 2.6e-146 est 3.1.1.1 S Serine aminopeptidase, S33
AFCCPELF_00611 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
AFCCPELF_00612 1.4e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
AFCCPELF_00613 6.3e-105 yxjI
AFCCPELF_00614 6.2e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
AFCCPELF_00615 1.1e-178 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
AFCCPELF_00616 2.9e-81 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
AFCCPELF_00617 2.6e-86 K Acetyltransferase (GNAT) domain
AFCCPELF_00618 4.4e-76 S PAS domain
AFCCPELF_00619 2.7e-102 dnaQ 2.7.7.7 L DNA polymerase III
AFCCPELF_00620 3.6e-168 murB 1.3.1.98 M Cell wall formation
AFCCPELF_00621 2.7e-166 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AFCCPELF_00622 1.7e-66 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
AFCCPELF_00623 4.8e-249 fucP G Major Facilitator Superfamily
AFCCPELF_00624 5e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
AFCCPELF_00625 2e-126 ybbR S YbbR-like protein
AFCCPELF_00626 9.4e-253 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AFCCPELF_00627 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
AFCCPELF_00628 8.7e-53
AFCCPELF_00629 0.0 oatA I Acyltransferase
AFCCPELF_00630 2.3e-81 K Transcriptional regulator
AFCCPELF_00631 2e-149 XK27_02985 S Cof-like hydrolase
AFCCPELF_00632 2.8e-79 lytE M Lysin motif
AFCCPELF_00634 1.5e-132 K response regulator
AFCCPELF_00635 6.8e-273 yclK 2.7.13.3 T Histidine kinase
AFCCPELF_00636 2.6e-155 glcU U sugar transport
AFCCPELF_00637 9e-94 lacA 2.3.1.79 S Transferase hexapeptide repeat
AFCCPELF_00638 1e-262 pgi 5.3.1.9 G Belongs to the GPI family
AFCCPELF_00639 1.3e-28
AFCCPELF_00640 1.6e-216 xylR GK ROK family
AFCCPELF_00642 4.3e-261 xylT EGP Major facilitator Superfamily
AFCCPELF_00643 8.6e-173 rhaS2 K Transcriptional regulator, AraC family
AFCCPELF_00644 1.8e-289 xynT G MFS/sugar transport protein
AFCCPELF_00645 0.0 3.2.1.55 GH51 G Right handed beta helix region
AFCCPELF_00646 4e-173 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AFCCPELF_00647 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
AFCCPELF_00648 9e-119 S Repeat protein
AFCCPELF_00649 1.1e-121 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
AFCCPELF_00650 1.8e-225 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
AFCCPELF_00651 3.7e-57 XK27_04120 S Putative amino acid metabolism
AFCCPELF_00652 1.1e-214 iscS 2.8.1.7 E Aminotransferase class V
AFCCPELF_00653 1e-125 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AFCCPELF_00655 1.1e-98 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
AFCCPELF_00656 4.2e-32 cspA K Cold shock protein
AFCCPELF_00657 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
AFCCPELF_00658 1.9e-42 divIVA D DivIVA domain protein
AFCCPELF_00659 5.1e-142 ylmH S S4 domain protein
AFCCPELF_00660 3.2e-40 yggT S YGGT family
AFCCPELF_00661 9.4e-71 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
AFCCPELF_00662 5.3e-226 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AFCCPELF_00663 6.6e-254 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
AFCCPELF_00664 2.5e-147 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
AFCCPELF_00665 3e-204 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
AFCCPELF_00666 2.9e-262 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
AFCCPELF_00667 3.4e-180 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
AFCCPELF_00668 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
AFCCPELF_00669 2.6e-56 ftsL D Cell division protein FtsL
AFCCPELF_00670 1.2e-174 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
AFCCPELF_00671 3.1e-77 mraZ K Belongs to the MraZ family
AFCCPELF_00672 7.3e-56
AFCCPELF_00673 1.2e-10 S Protein of unknown function (DUF4044)
AFCCPELF_00674 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
AFCCPELF_00675 3.9e-95 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
AFCCPELF_00676 3.7e-162 rrmA 2.1.1.187 H Methyltransferase
AFCCPELF_00677 2.3e-182 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
AFCCPELF_00679 7.6e-197 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
AFCCPELF_00680 1.9e-228 cinA 3.5.1.42 S Belongs to the CinA family
AFCCPELF_00681 2.5e-101 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AFCCPELF_00682 1.9e-141 ymfM S Helix-turn-helix domain
AFCCPELF_00683 3.2e-250 ymfH S Peptidase M16
AFCCPELF_00684 1.6e-230 ymfF S Peptidase M16 inactive domain protein
AFCCPELF_00685 2.6e-160 aatB ET ABC transporter substrate-binding protein
AFCCPELF_00686 2.1e-117 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
AFCCPELF_00687 3.2e-102 glnP P ABC transporter permease
AFCCPELF_00688 1.2e-91 mreD M rod shape-determining protein MreD
AFCCPELF_00689 2.2e-151 mreC M Involved in formation and maintenance of cell shape
AFCCPELF_00690 1.7e-179 mreB D cell shape determining protein MreB
AFCCPELF_00691 6.8e-121 radC L DNA repair protein
AFCCPELF_00692 3.7e-246 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
AFCCPELF_00693 7.6e-230 ndh 1.6.99.3 C NADH dehydrogenase
AFCCPELF_00694 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AFCCPELF_00695 2.8e-310 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
AFCCPELF_00696 6.3e-185 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
AFCCPELF_00697 1.9e-272 cydA 1.10.3.14 C ubiquinol oxidase
AFCCPELF_00698 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
AFCCPELF_00699 8.5e-229 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AFCCPELF_00700 1.3e-215 iscS2 2.8.1.7 E Aminotransferase class V
AFCCPELF_00701 3.7e-230 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
AFCCPELF_00702 3.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
AFCCPELF_00703 2.8e-165 L Transposase
AFCCPELF_00704 1.4e-124 yciB M ErfK YbiS YcfS YnhG
AFCCPELF_00706 7.2e-101
AFCCPELF_00707 3.5e-219 dacA 3.4.16.4 M Belongs to the peptidase S11 family
AFCCPELF_00708 5.5e-126 S Alpha beta hydrolase
AFCCPELF_00709 1.7e-207 gldA 1.1.1.6 C dehydrogenase
AFCCPELF_00710 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
AFCCPELF_00711 1.3e-41
AFCCPELF_00712 8e-125 pgm3 3.1.3.73 G phosphoglycerate mutase family
AFCCPELF_00713 1.1e-27 S C4-dicarboxylate anaerobic carrier
AFCCPELF_00714 4e-240 S C4-dicarboxylate anaerobic carrier
AFCCPELF_00715 1.8e-251 nhaC C Na H antiporter NhaC
AFCCPELF_00716 1.6e-241 pbuX F xanthine permease
AFCCPELF_00717 1.4e-283 pipD E Dipeptidase
AFCCPELF_00718 1.8e-304 L Transposase
AFCCPELF_00719 2.2e-168 corA P CorA-like Mg2+ transporter protein
AFCCPELF_00720 4.5e-166 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
AFCCPELF_00721 2.3e-131 terC P membrane
AFCCPELF_00722 2.1e-54 trxA O Belongs to the thioredoxin family
AFCCPELF_00723 1.6e-236 mepA V MATE efflux family protein
AFCCPELF_00724 7.2e-55 M Leucine-rich repeat (LRR) protein
AFCCPELF_00725 6.8e-56 K Transcriptional regulator, ArsR family
AFCCPELF_00726 5e-91 P Cadmium resistance transporter
AFCCPELF_00727 4.8e-137 XK27_08845 S ABC transporter, ATP-binding protein
AFCCPELF_00728 1.6e-152 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
AFCCPELF_00729 2.2e-182 ABC-SBP S ABC transporter
AFCCPELF_00730 1e-73 M PFAM NLP P60 protein
AFCCPELF_00731 7.4e-134 K LysR substrate binding domain
AFCCPELF_00732 9.5e-172 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
AFCCPELF_00733 3.9e-248 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
AFCCPELF_00734 1.6e-171 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
AFCCPELF_00735 6e-129 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
AFCCPELF_00736 2.5e-115 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
AFCCPELF_00737 9.6e-115 thiE 2.5.1.3, 2.7.6.2, 5.4.2.6 S Haloacid dehalogenase-like hydrolase
AFCCPELF_00738 6.7e-95 ribA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
AFCCPELF_00739 1.1e-236 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
AFCCPELF_00740 4.9e-177 K AI-2E family transporter
AFCCPELF_00741 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
AFCCPELF_00742 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
AFCCPELF_00743 1.3e-131 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
AFCCPELF_00744 4.3e-83 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AFCCPELF_00745 8.1e-213 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AFCCPELF_00746 2e-252 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AFCCPELF_00747 5.7e-132 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
AFCCPELF_00748 7e-37 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AFCCPELF_00749 5.2e-127 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AFCCPELF_00750 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
AFCCPELF_00751 2.2e-276 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AFCCPELF_00752 4.4e-194 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
AFCCPELF_00753 6.2e-105 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AFCCPELF_00754 8.6e-295 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
AFCCPELF_00755 6.9e-242 purD 6.3.4.13 F Belongs to the GARS family
AFCCPELF_00756 1e-130 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
AFCCPELF_00757 1.5e-173
AFCCPELF_00758 1.3e-240 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
AFCCPELF_00759 1.1e-64 yneR
AFCCPELF_00760 3.4e-131 yfeJ 6.3.5.2 F glutamine amidotransferase
AFCCPELF_00761 3.7e-140 T EAL domain
AFCCPELF_00762 1.2e-252 pgaC GT2 M Glycosyl transferase
AFCCPELF_00763 2.5e-36
AFCCPELF_00764 5.1e-173 2.7.7.65 T GGDEF domain
AFCCPELF_00765 5e-122 yhjH 3.1.4.52 T Putative diguanylate phosphodiesterase
AFCCPELF_00766 1.3e-256 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
AFCCPELF_00767 1.9e-197 asnA 6.3.1.1 F aspartate--ammonia ligase
AFCCPELF_00768 2e-92 folT S ECF transporter, substrate-specific component
AFCCPELF_00769 0.0 pepN 3.4.11.2 E aminopeptidase
AFCCPELF_00770 2e-112 ylbE GM NAD dependent epimerase dehydratase family protein
AFCCPELF_00771 9.8e-255 pepC 3.4.22.40 E aminopeptidase
AFCCPELF_00772 6.5e-210 EGP Major facilitator Superfamily
AFCCPELF_00773 1.8e-229
AFCCPELF_00774 5.5e-26 K Transcriptional regulator, HxlR family
AFCCPELF_00775 1.6e-43 K Transcriptional regulator, HxlR family
AFCCPELF_00776 1.4e-107 XK27_02070 S Nitroreductase family
AFCCPELF_00777 2.5e-52 hxlR K Transcriptional regulator, HxlR family
AFCCPELF_00778 3e-119 GM NmrA-like family
AFCCPELF_00779 1.7e-70 elaA S Gnat family
AFCCPELF_00780 1.8e-39 S Cytochrome B5
AFCCPELF_00781 5.4e-09 S Cytochrome B5
AFCCPELF_00782 7.8e-41 S Cytochrome B5
AFCCPELF_00783 2e-211 yxjG_1 E methionine synthase, vitamin-B12 independent
AFCCPELF_00785 2.3e-181 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
AFCCPELF_00786 1.1e-240 E amino acid
AFCCPELF_00787 1.8e-214 npp S type I phosphodiesterase nucleotide pyrophosphatase
AFCCPELF_00788 2.4e-43 yxiO S Vacuole effluxer Atg22 like
AFCCPELF_00789 7.2e-170 yxiO S Vacuole effluxer Atg22 like
AFCCPELF_00790 1.6e-52 azlD S branched-chain amino acid
AFCCPELF_00791 3.7e-136 azlC E AzlC protein
AFCCPELF_00792 2.7e-197 hpk31 2.7.13.3 T Histidine kinase
AFCCPELF_00793 1.2e-123 K response regulator
AFCCPELF_00794 2.9e-207 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
AFCCPELF_00795 9.5e-172 deoR K sugar-binding domain protein
AFCCPELF_00796 1.1e-130 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
AFCCPELF_00797 2.1e-233 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
AFCCPELF_00798 2.9e-234 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
AFCCPELF_00799 3.4e-118 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
AFCCPELF_00800 1.5e-135 XK27_01040 S Protein of unknown function (DUF1129)
AFCCPELF_00801 8.8e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
AFCCPELF_00802 5.4e-32 yyzM S Bacterial protein of unknown function (DUF951)
AFCCPELF_00803 3.8e-154 spo0J K Belongs to the ParB family
AFCCPELF_00804 3.9e-139 soj D Sporulation initiation inhibitor
AFCCPELF_00805 3.3e-151 noc K Belongs to the ParB family
AFCCPELF_00806 6.6e-128 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
AFCCPELF_00807 1.4e-161 fadB4 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
AFCCPELF_00808 5.6e-169 rihC 3.2.2.1 F Nucleoside
AFCCPELF_00809 2.3e-218 nupG F Nucleoside transporter
AFCCPELF_00810 9.4e-221 cycA E Amino acid permease
AFCCPELF_00811 1.4e-138 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
AFCCPELF_00812 1.2e-264 glnP P ABC transporter
AFCCPELF_00813 3.8e-251 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
AFCCPELF_00814 5.3e-217 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
AFCCPELF_00815 3.3e-46 gcvH E glycine cleavage
AFCCPELF_00816 4.1e-220 rodA D Belongs to the SEDS family
AFCCPELF_00817 1e-31 S Protein of unknown function (DUF2969)
AFCCPELF_00818 1.9e-178 mbl D Cell shape determining protein MreB Mrl
AFCCPELF_00819 1e-240 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AFCCPELF_00820 1.3e-33 ywzB S Protein of unknown function (DUF1146)
AFCCPELF_00821 4.5e-68 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
AFCCPELF_00822 1.1e-267 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
AFCCPELF_00823 1.9e-164 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
AFCCPELF_00824 4e-284 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
AFCCPELF_00825 5.1e-93 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AFCCPELF_00826 1.1e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
AFCCPELF_00827 1.5e-14 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
AFCCPELF_00828 7.3e-124 atpB C it plays a direct role in the translocation of protons across the membrane
AFCCPELF_00829 5e-232 pyrP F Permease
AFCCPELF_00830 6.3e-129 yibF S overlaps another CDS with the same product name
AFCCPELF_00831 9.9e-192 yibE S overlaps another CDS with the same product name
AFCCPELF_00832 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AFCCPELF_00833 6.6e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
AFCCPELF_00834 9.2e-231 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
AFCCPELF_00835 1e-195 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
AFCCPELF_00836 9.8e-163 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
AFCCPELF_00837 1.2e-194 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
AFCCPELF_00838 6e-108 tdk 2.7.1.21 F thymidine kinase
AFCCPELF_00839 6.3e-213 phbA 2.3.1.9 I Belongs to the thiolase family
AFCCPELF_00840 1.5e-172 malR K Transcriptional regulator, LacI family
AFCCPELF_00841 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
AFCCPELF_00842 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
AFCCPELF_00843 7.2e-283 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AFCCPELF_00844 3.1e-104 wecD3 K PFAM GCN5-related N-acetyltransferase
AFCCPELF_00846 0.0 clpL O associated with various cellular activities
AFCCPELF_00847 7.8e-32
AFCCPELF_00848 6.1e-216 patA 2.6.1.1 E Aminotransferase
AFCCPELF_00849 8e-177 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AFCCPELF_00850 5e-75 osmC O OsmC-like protein
AFCCPELF_00851 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
AFCCPELF_00852 3e-34
AFCCPELF_00853 2.5e-289 mntH P H( )-stimulated, divalent metal cation uptake system
AFCCPELF_00854 9.9e-191 tdh 1.1.1.14 E Alcohol dehydrogenase GroES-like domain
AFCCPELF_00855 2.6e-86 ygfC K transcriptional regulator (TetR family)
AFCCPELF_00856 2.1e-183 hrtB V ABC transporter permease
AFCCPELF_00857 1.8e-114 devA 3.6.3.25 V ABC transporter, ATP-binding protein
AFCCPELF_00858 0.0 yhcA V ABC transporter, ATP-binding protein
AFCCPELF_00859 4.6e-38
AFCCPELF_00860 3.5e-49 czrA K Transcriptional regulator, ArsR family
AFCCPELF_00861 2.2e-211 acm2 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AFCCPELF_00862 5.1e-173 scrR K Transcriptional regulator, LacI family
AFCCPELF_00863 3e-24
AFCCPELF_00864 8.2e-103
AFCCPELF_00865 2.6e-214 yttB EGP Major facilitator Superfamily
AFCCPELF_00866 5.7e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
AFCCPELF_00867 2.2e-87
AFCCPELF_00868 3.5e-109 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
AFCCPELF_00869 7.3e-261 S Putative peptidoglycan binding domain
AFCCPELF_00870 7e-43 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
AFCCPELF_00871 3.5e-165 T Calcineurin-like phosphoesterase superfamily domain
AFCCPELF_00872 2.4e-223 mdtG EGP Major facilitator Superfamily
AFCCPELF_00873 3e-130 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
AFCCPELF_00874 1.9e-156 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
AFCCPELF_00875 1.8e-176 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
AFCCPELF_00876 0.0 lacZ 3.2.1.23 G -beta-galactosidase
AFCCPELF_00877 6.5e-221 lacS G Transporter
AFCCPELF_00878 2.1e-107 lacS G Transporter
AFCCPELF_00879 1.3e-185 lacR K Transcriptional regulator
AFCCPELF_00880 3e-50 S CRISPR-associated protein (Cas_Csn2)
AFCCPELF_00881 1.7e-37 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
AFCCPELF_00882 9.8e-113 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
AFCCPELF_00883 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
AFCCPELF_00884 9.5e-83
AFCCPELF_00885 6.9e-158 xth 3.1.11.2 L exodeoxyribonuclease III
AFCCPELF_00886 6.4e-54 S Mazg nucleotide pyrophosphohydrolase
AFCCPELF_00887 2.9e-34
AFCCPELF_00888 1.3e-139 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
AFCCPELF_00889 3.4e-47
AFCCPELF_00890 3e-13
AFCCPELF_00891 6.9e-10
AFCCPELF_00892 1.8e-292 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
AFCCPELF_00893 1.1e-189 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AFCCPELF_00894 1.4e-170 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
AFCCPELF_00895 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
AFCCPELF_00896 1.5e-97 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
AFCCPELF_00897 1.1e-256 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
AFCCPELF_00898 9.8e-67 yabR J RNA binding
AFCCPELF_00899 3.3e-56 divIC D Septum formation initiator
AFCCPELF_00900 8.1e-39 yabO J S4 domain protein
AFCCPELF_00901 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AFCCPELF_00902 3.3e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
AFCCPELF_00903 4e-113 S (CBS) domain
AFCCPELF_00904 3.1e-147 tesE Q hydratase
AFCCPELF_00905 4.7e-243 codA 3.5.4.1 F cytosine deaminase
AFCCPELF_00906 6.8e-251 U Belongs to the purine-cytosine permease (2.A.39) family
AFCCPELF_00907 3.2e-62 L Toxic component of a toxin-antitoxin (TA) module
AFCCPELF_00908 1.9e-211 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AFCCPELF_00909 2.2e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
AFCCPELF_00911 6.5e-295 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
AFCCPELF_00912 2.8e-232 dltB M MBOAT, membrane-bound O-acyltransferase family
AFCCPELF_00913 2.8e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
AFCCPELF_00914 1.4e-253 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
AFCCPELF_00915 6.5e-165 glsA 3.5.1.2 E Belongs to the glutaminase family
AFCCPELF_00916 1e-141 sprD D Domain of Unknown Function (DUF1542)
AFCCPELF_00917 1.5e-105 L PFAM Integrase catalytic region
AFCCPELF_00918 1.4e-249 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
AFCCPELF_00919 1.8e-259 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
AFCCPELF_00920 2.6e-158 htpX O Belongs to the peptidase M48B family
AFCCPELF_00921 7e-93 lemA S LemA family
AFCCPELF_00922 1.5e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AFCCPELF_00923 4.6e-120 pgm3 G Belongs to the phosphoglycerate mutase family
AFCCPELF_00924 1.4e-161 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
AFCCPELF_00925 2.3e-139 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
AFCCPELF_00926 1.1e-234 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
AFCCPELF_00927 5.1e-125 srtA 3.4.22.70 M sortase family
AFCCPELF_00928 1.3e-165 S Alpha/beta hydrolase of unknown function (DUF915)
AFCCPELF_00929 1.2e-236 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
AFCCPELF_00930 4.6e-41 rpmE2 J Ribosomal protein L31
AFCCPELF_00931 5.7e-236 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
AFCCPELF_00932 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
AFCCPELF_00933 8.7e-51 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
AFCCPELF_00934 3e-66 ywiB S Domain of unknown function (DUF1934)
AFCCPELF_00935 1.1e-144 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
AFCCPELF_00936 5e-270 ywfO S HD domain protein
AFCCPELF_00937 7.1e-147 yxeH S hydrolase
AFCCPELF_00938 2.1e-49
AFCCPELF_00939 1.1e-178 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
AFCCPELF_00940 7.5e-242 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
AFCCPELF_00941 2.6e-149 purR 2.4.2.7 F pur operon repressor
AFCCPELF_00942 1.4e-118 znuB U ABC 3 transport family
AFCCPELF_00943 1.4e-121 fhuC P ABC transporter
AFCCPELF_00944 8.2e-168 znuA P Belongs to the bacterial solute-binding protein 9 family
AFCCPELF_00945 4.9e-159 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
AFCCPELF_00946 6.8e-37 veg S Biofilm formation stimulator VEG
AFCCPELF_00947 5.2e-159 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
AFCCPELF_00948 3.2e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
AFCCPELF_00949 1.9e-155 tatD L hydrolase, TatD family
AFCCPELF_00950 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AFCCPELF_00951 3.6e-162 yunF F Protein of unknown function DUF72
AFCCPELF_00953 3e-130 cobB K SIR2 family
AFCCPELF_00954 1.6e-177
AFCCPELF_00955 2.1e-222 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
AFCCPELF_00956 1.3e-165 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
AFCCPELF_00957 9.1e-192 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
AFCCPELF_00958 1.7e-187 hpaIM 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
AFCCPELF_00959 2.2e-81 ndk 2.7.4.6 F Belongs to the NDK family
AFCCPELF_00960 0.0 helD 3.6.4.12 L DNA helicase
AFCCPELF_00961 5.3e-204 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
AFCCPELF_00963 1.2e-224 gabT 2.6.1.19 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AFCCPELF_00965 1.4e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
AFCCPELF_00966 3e-86
AFCCPELF_00967 4e-253 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
AFCCPELF_00968 9.6e-183 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
AFCCPELF_00969 4.2e-261 nox C NADH oxidase
AFCCPELF_00970 1.1e-86 hmpT S ECF-type riboflavin transporter, S component
AFCCPELF_00971 0.0 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
AFCCPELF_00972 6.1e-48 1.14.12.17 S Cupin 2, conserved barrel domain protein
AFCCPELF_00973 8.6e-167 yvgN C Aldo keto reductase
AFCCPELF_00974 1.5e-135 puuD S peptidase C26
AFCCPELF_00975 8.1e-257 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
AFCCPELF_00976 2.5e-209 yfeO P Voltage gated chloride channel
AFCCPELF_00977 5.3e-226 sptS 2.7.13.3 T Histidine kinase
AFCCPELF_00978 3.3e-118 K response regulator
AFCCPELF_00979 1.7e-87 2.7.6.5 T Region found in RelA / SpoT proteins
AFCCPELF_00980 5.4e-121 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
AFCCPELF_00981 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
AFCCPELF_00982 1.1e-256 malT G Major Facilitator
AFCCPELF_00983 4.3e-13 K Transcriptional regulator, TetR family
AFCCPELF_00984 6.2e-76 K Transcriptional regulator, TetR family
AFCCPELF_00985 2.2e-72
AFCCPELF_00986 4.8e-269 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
AFCCPELF_00987 4.6e-261 tagE2 2.4.1.52 GT4 M Poly(Glycerol-phosphate) alpha-glucosyltransferase
AFCCPELF_00988 2.4e-277 M domain protein
AFCCPELF_00989 0.0 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
AFCCPELF_00990 3.2e-264 G Major Facilitator
AFCCPELF_00991 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
AFCCPELF_00992 3.1e-206 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
AFCCPELF_00993 1e-259 G Major Facilitator
AFCCPELF_00994 2.4e-181 K Transcriptional regulator, LacI family
AFCCPELF_00995 2.6e-266 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
AFCCPELF_00997 1.2e-100 nqr 1.5.1.36 S reductase
AFCCPELF_00998 6.1e-198 XK27_09615 S reductase
AFCCPELF_00999 1.6e-179 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
AFCCPELF_01000 1.2e-112 GM NAD(P)H-binding
AFCCPELF_01001 6.1e-88 S membrane
AFCCPELF_01002 2.1e-74 S membrane
AFCCPELF_01003 1.8e-104 K Transcriptional regulator C-terminal region
AFCCPELF_01004 7.6e-163 akr5f 1.1.1.346 S reductase
AFCCPELF_01005 4.3e-40 K Transcriptional regulator
AFCCPELF_01006 4.3e-59 K Transcriptional regulator
AFCCPELF_01007 5.2e-184 ansA 3.5.1.1 EJ L-asparaginase, type I
AFCCPELF_01008 2.3e-155 ypuA S Protein of unknown function (DUF1002)
AFCCPELF_01009 4.7e-66 GM NAD(P)H-binding
AFCCPELF_01010 3.3e-92 padR K Virulence activator alpha C-term
AFCCPELF_01011 2.3e-93 padC Q Phenolic acid decarboxylase
AFCCPELF_01012 2e-152 S Alpha beta hydrolase
AFCCPELF_01013 9.4e-32 S thiolester hydrolase activity
AFCCPELF_01014 6.3e-88 lacA S transferase hexapeptide repeat
AFCCPELF_01015 5.6e-158 K Transcriptional regulator
AFCCPELF_01016 2.7e-85 C Flavodoxin
AFCCPELF_01017 1.6e-165 S Oxidoreductase, aldo keto reductase family protein
AFCCPELF_01018 8.2e-166 K COG COG0846 NAD-dependent protein deacetylases, SIR2 family
AFCCPELF_01019 2.2e-77 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AFCCPELF_01020 5.3e-83 K Bacterial regulatory proteins, tetR family
AFCCPELF_01021 4.3e-55 yphJ 4.1.1.44 S decarboxylase
AFCCPELF_01022 1.7e-76 P FAD-binding domain
AFCCPELF_01023 4.7e-109 S Peptidase propeptide and YPEB domain
AFCCPELF_01024 6.4e-238 T GHKL domain
AFCCPELF_01025 7.3e-121 T Transcriptional regulatory protein, C terminal
AFCCPELF_01026 5.8e-15 K transcriptional
AFCCPELF_01027 6.6e-133 K Transcriptional regulatory protein, C-terminal domain protein
AFCCPELF_01028 2.5e-158 pstS P Phosphate
AFCCPELF_01029 2.8e-152 pstC P probably responsible for the translocation of the substrate across the membrane
AFCCPELF_01030 3.6e-152 pstA P Phosphate transport system permease protein PstA
AFCCPELF_01031 2e-135 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
AFCCPELF_01032 1.9e-124 phoU P Plays a role in the regulation of phosphate uptake
AFCCPELF_01033 3e-09
AFCCPELF_01034 8.2e-111
AFCCPELF_01035 6.1e-241 ydaM M Glycosyl transferase
AFCCPELF_01036 4.8e-218 G Glycosyl hydrolases family 8
AFCCPELF_01037 1.1e-138 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
AFCCPELF_01038 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
AFCCPELF_01039 1.7e-238 ktrB P Potassium uptake protein
AFCCPELF_01040 1.4e-116 ktrA P domain protein
AFCCPELF_01041 1.2e-81 Q Methyltransferase
AFCCPELF_01042 6.3e-230 mntH P H( )-stimulated, divalent metal cation uptake system
AFCCPELF_01043 8.9e-65 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
AFCCPELF_01044 1.3e-15 G Belongs to the glycosyl hydrolase family 6
AFCCPELF_01045 6.1e-180 MA20_14895 S Conserved hypothetical protein 698
AFCCPELF_01046 3.5e-134 I alpha/beta hydrolase fold
AFCCPELF_01047 7.5e-168 lsa S ABC transporter
AFCCPELF_01048 8.6e-59 lsa S ABC transporter
AFCCPELF_01049 9.5e-209 rny S Endoribonuclease that initiates mRNA decay
AFCCPELF_01050 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AFCCPELF_01051 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
AFCCPELF_01052 1.9e-101 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
AFCCPELF_01053 3.4e-191 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
AFCCPELF_01054 2.6e-189 tgt_1 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
AFCCPELF_01055 2.8e-31 yajC U Preprotein translocase
AFCCPELF_01056 4.2e-183 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
AFCCPELF_01057 3.7e-233 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
AFCCPELF_01058 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
AFCCPELF_01059 4.1e-43 yrzL S Belongs to the UPF0297 family
AFCCPELF_01060 3.6e-76 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
AFCCPELF_01061 6.1e-48 yrzB S Belongs to the UPF0473 family
AFCCPELF_01062 1e-85 cvpA S Colicin V production protein
AFCCPELF_01063 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
AFCCPELF_01064 6.1e-54 trxA O Belongs to the thioredoxin family
AFCCPELF_01065 1.3e-96 yslB S Protein of unknown function (DUF2507)
AFCCPELF_01066 2.1e-143 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
AFCCPELF_01067 2.7e-103 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
AFCCPELF_01068 4.4e-94 S Phosphoesterase
AFCCPELF_01069 3.6e-76 ykuL S (CBS) domain
AFCCPELF_01070 5.2e-153 3.1.3.102, 3.1.3.104, 3.1.3.23 S haloacid dehalogenase-like hydrolase
AFCCPELF_01071 3.4e-147 ykuT M mechanosensitive ion channel
AFCCPELF_01072 9.4e-37 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
AFCCPELF_01073 3.5e-26
AFCCPELF_01074 4.2e-211 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
AFCCPELF_01075 1.9e-181 ccpA K catabolite control protein A
AFCCPELF_01076 1.9e-134
AFCCPELF_01077 3.5e-132 yebC K Transcriptional regulatory protein
AFCCPELF_01078 2.6e-180 comGA NU Type II IV secretion system protein
AFCCPELF_01079 9.5e-181 comGB NU type II secretion system
AFCCPELF_01080 7.1e-47 comGC U competence protein ComGC
AFCCPELF_01081 8.3e-78 NU general secretion pathway protein
AFCCPELF_01082 2.7e-40
AFCCPELF_01083 6.3e-70
AFCCPELF_01085 1.7e-145 ytxK 2.1.1.72 L N-6 DNA Methylase
AFCCPELF_01086 2.1e-219 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
AFCCPELF_01087 2.2e-113 S Calcineurin-like phosphoesterase
AFCCPELF_01088 1.3e-93 yutD S Protein of unknown function (DUF1027)
AFCCPELF_01089 1.1e-133 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
AFCCPELF_01090 2.4e-105 S Protein of unknown function (DUF1461)
AFCCPELF_01091 5.5e-110 dedA S SNARE-like domain protein
AFCCPELF_01092 1.7e-48 rpsJ J Involved in the binding of tRNA to the ribosomes
AFCCPELF_01093 1.5e-118 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
AFCCPELF_01094 5.5e-107 rplD J Forms part of the polypeptide exit tunnel
AFCCPELF_01095 5.7e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
AFCCPELF_01096 4.2e-150 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
AFCCPELF_01097 1.4e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
AFCCPELF_01098 4.8e-52 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
AFCCPELF_01099 6.1e-112 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
AFCCPELF_01100 3.5e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
AFCCPELF_01101 8.4e-28 rpmC J Belongs to the universal ribosomal protein uL29 family
AFCCPELF_01102 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
AFCCPELF_01103 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
AFCCPELF_01104 2.6e-49 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
AFCCPELF_01105 1.4e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
AFCCPELF_01106 1.3e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
AFCCPELF_01107 1.6e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
AFCCPELF_01108 6.6e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
AFCCPELF_01109 2.2e-85 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
AFCCPELF_01110 2.9e-24 rpmD J Ribosomal protein L30
AFCCPELF_01111 8.9e-64 rplO J Binds to the 23S rRNA
AFCCPELF_01112 8.8e-240 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
AFCCPELF_01113 8.1e-125 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
AFCCPELF_01114 5.9e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
AFCCPELF_01115 1.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
AFCCPELF_01116 4.7e-58 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
AFCCPELF_01117 2.3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
AFCCPELF_01118 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AFCCPELF_01119 1.1e-62 rplQ J Ribosomal protein L17
AFCCPELF_01120 3e-145 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AFCCPELF_01121 7.8e-152 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AFCCPELF_01122 2.2e-140 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
AFCCPELF_01123 1.9e-141 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
AFCCPELF_01124 4.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
AFCCPELF_01125 5.6e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
AFCCPELF_01126 8.2e-48
AFCCPELF_01127 7.8e-272 S ABC transporter, ATP-binding protein
AFCCPELF_01128 2.3e-142 S Putative ABC-transporter type IV
AFCCPELF_01129 2e-106 NU mannosyl-glycoprotein
AFCCPELF_01130 3.2e-248 brnQ U Component of the transport system for branched-chain amino acids
AFCCPELF_01131 1.5e-228 S Uncharacterized protein conserved in bacteria (DUF2325)
AFCCPELF_01132 7.6e-205 nrnB S DHHA1 domain
AFCCPELF_01134 6.9e-49
AFCCPELF_01135 2.9e-27 3.6.4.12 S PD-(D/E)XK nuclease family transposase
AFCCPELF_01136 2.6e-98 3.6.4.12 S PD-(D/E)XK nuclease family transposase
AFCCPELF_01137 2e-15 S Domain of unknown function (DUF4767)
AFCCPELF_01138 9.5e-55
AFCCPELF_01139 2.9e-117 yrkL S Flavodoxin-like fold
AFCCPELF_01141 1.6e-64 yeaO S Protein of unknown function, DUF488
AFCCPELF_01142 7.5e-120 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
AFCCPELF_01143 3e-204 3.1.3.1 S associated with various cellular activities
AFCCPELF_01144 5.4e-242 S Putative metallopeptidase domain
AFCCPELF_01145 5.1e-47
AFCCPELF_01146 9.9e-88 comEB 3.5.4.12 F ComE operon protein 2
AFCCPELF_01147 2.6e-80 comEA L Competence protein ComEA
AFCCPELF_01148 4.3e-197 ylbL T Belongs to the peptidase S16 family
AFCCPELF_01149 5.1e-90 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
AFCCPELF_01150 6.5e-99 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
AFCCPELF_01151 3e-44 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
AFCCPELF_01152 3.5e-222 ftsW D Belongs to the SEDS family
AFCCPELF_01153 0.0 typA T GTP-binding protein TypA
AFCCPELF_01154 2.8e-137 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
AFCCPELF_01155 1.4e-47 yktA S Belongs to the UPF0223 family
AFCCPELF_01156 4.1e-275 lpdA 1.8.1.4 C Dehydrogenase
AFCCPELF_01157 1.8e-224 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
AFCCPELF_01158 2.4e-181 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
AFCCPELF_01159 3e-209 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
AFCCPELF_01160 8.2e-102 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
AFCCPELF_01161 2.4e-78
AFCCPELF_01162 9.8e-32 ykzG S Belongs to the UPF0356 family
AFCCPELF_01163 5.7e-180 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic
AFCCPELF_01165 4e-192 nss M transferase activity, transferring glycosyl groups
AFCCPELF_01166 1.5e-209 secY2 U Part of the accessory SecA2 SecY2 system specifically required for export of
AFCCPELF_01167 7.2e-286 M transferase activity, transferring glycosyl groups
AFCCPELF_01168 5.4e-278 asp2 3.4.11.5 S Accessory Sec system GspB-transporter
AFCCPELF_01169 1.5e-163 asp3 S Accessory Sec secretory system ASP3
AFCCPELF_01170 0.0 secA2 U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
AFCCPELF_01171 1.1e-225 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
AFCCPELF_01172 4.6e-196 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
AFCCPELF_01174 3.6e-17 sraP UW this gene contains a nucleotide ambiguity which may be the result of a sequencing error
AFCCPELF_01175 1.5e-07 UW Hep Hag repeat protein
AFCCPELF_01176 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
AFCCPELF_01177 2.4e-83 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
AFCCPELF_01178 3.9e-72 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
AFCCPELF_01179 1.5e-118 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
AFCCPELF_01180 2.2e-202 ykiI
AFCCPELF_01181 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AFCCPELF_01182 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
AFCCPELF_01183 1e-110 K Bacterial regulatory proteins, tetR family
AFCCPELF_01184 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
AFCCPELF_01185 3.4e-77 ctsR K Belongs to the CtsR family
AFCCPELF_01186 1.2e-196 adhP 1.1.1.1 C alcohol dehydrogenase
AFCCPELF_01187 3.9e-16 S Hydrolases of the alpha beta superfamily
AFCCPELF_01188 1.2e-129 S Hydrolases of the alpha beta superfamily
AFCCPELF_01194 4.3e-115 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
AFCCPELF_01195 1.5e-275 lysP E amino acid
AFCCPELF_01196 1e-09 2.3.1.128 J Acetyltransferase (GNAT) domain
AFCCPELF_01197 2.7e-120 lssY 3.6.1.27 I phosphatase
AFCCPELF_01198 6.7e-81 S Threonine/Serine exporter, ThrE
AFCCPELF_01199 3.6e-129 thrE S Putative threonine/serine exporter
AFCCPELF_01200 3.5e-31 cspC K Cold shock protein
AFCCPELF_01201 1.1e-124 sirR K iron dependent repressor
AFCCPELF_01202 2.6e-166 czcD P cation diffusion facilitator family transporter
AFCCPELF_01203 5e-117 S membrane
AFCCPELF_01204 7.6e-110 S VIT family
AFCCPELF_01205 5.5e-83 usp1 T Belongs to the universal stress protein A family
AFCCPELF_01206 6.9e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
AFCCPELF_01207 1.7e-151 glnH ET ABC transporter
AFCCPELF_01208 4.2e-110 gluC P ABC transporter permease
AFCCPELF_01209 1.4e-108 glnP P ABC transporter permease
AFCCPELF_01210 1.1e-217 S CAAX protease self-immunity
AFCCPELF_01211 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AFCCPELF_01212 2.5e-53
AFCCPELF_01213 4.9e-73 merR K MerR HTH family regulatory protein
AFCCPELF_01214 2.7e-269 lmrB EGP Major facilitator Superfamily
AFCCPELF_01215 9.5e-119 S Domain of unknown function (DUF4811)
AFCCPELF_01216 4.6e-160 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
AFCCPELF_01218 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AFCCPELF_01219 4e-104 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
AFCCPELF_01220 3.4e-188 I Alpha beta
AFCCPELF_01221 8.5e-282 emrY EGP Major facilitator Superfamily
AFCCPELF_01222 2.8e-117 ung2 3.2.2.27 L Uracil-DNA glycosylase
AFCCPELF_01223 2e-250 yjjP S Putative threonine/serine exporter
AFCCPELF_01224 1e-159 mleR K LysR family
AFCCPELF_01225 8.5e-113 ydjP I Alpha/beta hydrolase family
AFCCPELF_01226 3.3e-147 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
AFCCPELF_01227 2.1e-272 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
AFCCPELF_01228 3.6e-160 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
AFCCPELF_01229 1.2e-40 citD C Covalent carrier of the coenzyme of citrate lyase
AFCCPELF_01230 7.4e-149 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
AFCCPELF_01231 4.2e-177 mez_1 1.1.1.38 C Malic enzyme, NAD binding domain
AFCCPELF_01232 2.3e-125 citR K sugar-binding domain protein
AFCCPELF_01233 1e-164 citP P Sodium:sulfate symporter transmembrane region
AFCCPELF_01234 9.7e-132 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
AFCCPELF_01235 1.3e-268 frdC 1.3.5.4 C FAD binding domain
AFCCPELF_01236 4.7e-260 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
AFCCPELF_01237 1.8e-303 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
AFCCPELF_01238 1.9e-161 mleR K LysR family
AFCCPELF_01239 1e-110 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AFCCPELF_01240 1.1e-205 adhA 1.1.1.1 C Zinc-binding alcohol dehydrogenase family protein
AFCCPELF_01241 9.4e-295 L PFAM plasmid pRiA4b ORF-3 family protein
AFCCPELF_01242 7.2e-169 L transposase, IS605 OrfB family
AFCCPELF_01243 7.1e-264 S Uncharacterized protein conserved in bacteria (DUF2252)
AFCCPELF_01244 1.9e-25
AFCCPELF_01245 3.2e-200 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
AFCCPELF_01246 3e-75
AFCCPELF_01247 7.4e-228 dacA 3.4.16.4 M Belongs to the peptidase S11 family
AFCCPELF_01248 1.3e-125 G Peptidase_C39 like family
AFCCPELF_01249 2.1e-25
AFCCPELF_01250 0.0 ganB 3.2.1.89 G arabinogalactan
AFCCPELF_01251 3.6e-218 glf 5.4.99.9 M UDP-galactopyranose mutase
AFCCPELF_01252 2.3e-209 rfbX S Membrane protein involved in the export of O-antigen and teichoic acid
AFCCPELF_01253 1.4e-75 M transferase activity, transferring glycosyl groups
AFCCPELF_01254 1.3e-88 cps3F
AFCCPELF_01255 6.6e-28 M biosynthesis protein
AFCCPELF_01256 2e-76 rgpB GT2 M Glycosyl transferase family 2
AFCCPELF_01257 3.4e-66 S Glycosyltransferase like family
AFCCPELF_01258 3.7e-80 glfT1 1.1.1.133 S Glycosyltransferase like family 2
AFCCPELF_01259 0.0 L PLD-like domain
AFCCPELF_01260 2.6e-106 L Uncharacterized conserved protein (DUF2075)
AFCCPELF_01261 6.8e-52 yhaI S Protein of unknown function (DUF805)
AFCCPELF_01262 5e-44
AFCCPELF_01263 2.4e-22
AFCCPELF_01264 5.4e-47
AFCCPELF_01265 3.7e-96 K Acetyltransferase (GNAT) domain
AFCCPELF_01266 2.9e-295 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
AFCCPELF_01267 1.2e-201 gntT EG Gluconate
AFCCPELF_01268 1.9e-11 gntT EG Gluconate
AFCCPELF_01269 2.2e-182 K Transcriptional regulator, LacI family
AFCCPELF_01270 1.8e-289 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
AFCCPELF_01271 3.2e-95
AFCCPELF_01272 2.1e-25
AFCCPELF_01273 1.3e-61 asp S Asp23 family, cell envelope-related function
AFCCPELF_01274 6.7e-278 pipD E Dipeptidase
AFCCPELF_01275 0.0 yjbQ P TrkA C-terminal domain protein
AFCCPELF_01276 4.6e-25 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
AFCCPELF_01277 5.3e-289 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
AFCCPELF_01278 3.2e-81
AFCCPELF_01279 1.8e-66 K Transcriptional regulator, HxlR family
AFCCPELF_01280 2.6e-167 brpA K Cell envelope-like function transcriptional attenuator common domain protein
AFCCPELF_01281 8.2e-141 epsB M biosynthesis protein
AFCCPELF_01282 2.6e-119 ywqD 2.7.10.1 D Capsular exopolysaccharide family
AFCCPELF_01283 5.3e-138 cps2D 5.1.3.2 M RmlD substrate binding domain
AFCCPELF_01284 1.8e-92 tuaA M Bacterial sugar transferase
AFCCPELF_01285 1.2e-61 lsgF M Glycosyl transferase family 2
AFCCPELF_01286 5.9e-28 M Glycosyltransferase like family 2
AFCCPELF_01287 8e-174 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
AFCCPELF_01289 2.8e-57
AFCCPELF_01290 4.1e-178 prmA J Ribosomal protein L11 methyltransferase
AFCCPELF_01291 1.2e-129 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
AFCCPELF_01292 1.2e-52
AFCCPELF_01293 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AFCCPELF_01294 8.4e-78 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
AFCCPELF_01295 2.1e-165 yniA G Phosphotransferase enzyme family
AFCCPELF_01296 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
AFCCPELF_01297 6.5e-131 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
AFCCPELF_01298 9.1e-265 glnPH2 P ABC transporter permease
AFCCPELF_01299 7.5e-23 rpsU J Belongs to the bacterial ribosomal protein bS21 family
AFCCPELF_01300 3.8e-70 yqeY S YqeY-like protein
AFCCPELF_01301 9.3e-65 gntR1 K Transcriptional regulator, GntR family
AFCCPELF_01302 3.6e-157 V ABC transporter, ATP-binding protein
AFCCPELF_01303 6.7e-114
AFCCPELF_01304 8e-142 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G MucBP domain
AFCCPELF_01305 2.4e-99 S Pfam:DUF3816
AFCCPELF_01306 0.0 clpE O Belongs to the ClpA ClpB family
AFCCPELF_01307 2.9e-27
AFCCPELF_01308 2.7e-39 ptsH G phosphocarrier protein HPR
AFCCPELF_01309 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AFCCPELF_01310 1.4e-226 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
AFCCPELF_01311 7.2e-197 cpoA GT4 M Glycosyltransferase, group 1 family protein
AFCCPELF_01312 2.5e-178 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
AFCCPELF_01313 1.5e-39 ykuJ S Protein of unknown function (DUF1797)
AFCCPELF_01314 9.1e-92 K Acetyltransferase (GNAT) family
AFCCPELF_01315 6.4e-78 K LytTr DNA-binding domain
AFCCPELF_01316 1.2e-68 S Protein of unknown function (DUF3021)
AFCCPELF_01317 1.5e-153 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
AFCCPELF_01318 6.7e-106 XK27_00915 C Luciferase-like monooxygenase
AFCCPELF_01319 5.8e-54 XK27_00915 C Luciferase-like monooxygenase
AFCCPELF_01320 2e-74 ogt 2.1.1.63 L Methyltransferase
AFCCPELF_01321 4.8e-122 pnb C nitroreductase
AFCCPELF_01322 2.1e-91
AFCCPELF_01323 1.8e-90 S B3 4 domain
AFCCPELF_01324 2.1e-249 gor 1.8.1.7 C pyridine nucleotide-disulfide oxidoreductase
AFCCPELF_01325 5.2e-157 amtB P ammonium transporter
AFCCPELF_01326 1.9e-37 3.6.4.12 S PD-(D/E)XK nuclease family transposase
AFCCPELF_01328 1.3e-46
AFCCPELF_01331 1.3e-119 sdaAB 4.3.1.17 E Serine dehydratase beta chain
AFCCPELF_01332 6.5e-138 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
AFCCPELF_01333 2.1e-105 ahpC 1.11.1.15 O Peroxiredoxin
AFCCPELF_01334 0.0 trxB2 1.8.1.9 C Thioredoxin domain
AFCCPELF_01335 4e-182 M LPXTG-motif cell wall anchor domain protein
AFCCPELF_01336 0.0 M LPXTG-motif cell wall anchor domain protein
AFCCPELF_01337 1.1e-19 M LPXTG-motif cell wall anchor domain protein
AFCCPELF_01338 5.4e-135 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
AFCCPELF_01339 3.7e-190 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AFCCPELF_01340 2.9e-310 lmrA V ABC transporter, ATP-binding protein
AFCCPELF_01341 0.0 yfiC V ABC transporter
AFCCPELF_01342 1.1e-283 pipD E Dipeptidase
AFCCPELF_01343 3.9e-87 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AFCCPELF_01344 1.4e-133 gntR K UbiC transcription regulator-associated domain protein
AFCCPELF_01345 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
AFCCPELF_01346 3e-198 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
AFCCPELF_01347 2.7e-108 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
AFCCPELF_01348 1.7e-162 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
AFCCPELF_01349 0.0 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AFCCPELF_01350 7.9e-62 S integral membrane protein
AFCCPELF_01351 2.6e-164 ykoT GT2 M Glycosyl transferase family 2
AFCCPELF_01352 7.1e-72 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
AFCCPELF_01353 2.8e-35
AFCCPELF_01354 2.2e-19 S Acyltransferase family
AFCCPELF_01355 1.9e-170 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
AFCCPELF_01356 5.1e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
AFCCPELF_01357 5.1e-248 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
AFCCPELF_01358 3.3e-76 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
AFCCPELF_01359 1.9e-222 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
AFCCPELF_01360 1.3e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AFCCPELF_01361 5.8e-138 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
AFCCPELF_01362 5.5e-217 patA 2.6.1.1 E Aminotransferase
AFCCPELF_01363 3.9e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AFCCPELF_01364 6.5e-151 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AFCCPELF_01365 5.6e-277 pepV 3.5.1.18 E dipeptidase PepV
AFCCPELF_01366 5.6e-86 uspA T Belongs to the universal stress protein A family
AFCCPELF_01367 1.4e-176 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
AFCCPELF_01368 5e-116 dck 2.7.1.74 F deoxynucleoside kinase
AFCCPELF_01369 3.8e-113
AFCCPELF_01370 1.6e-185 rbsR K Periplasmic binding proteins and sugar binding domain of LacI family
AFCCPELF_01371 4.4e-161 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AFCCPELF_01372 2.1e-32
AFCCPELF_01373 4.5e-112 S CAAX protease self-immunity
AFCCPELF_01374 1.9e-43
AFCCPELF_01376 2.2e-54 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AFCCPELF_01377 5.2e-87 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
AFCCPELF_01378 1.1e-104 folE 2.7.6.3, 3.5.4.16 F GTP cyclohydrolase 1
AFCCPELF_01379 4.5e-225 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
AFCCPELF_01380 2.8e-105 xtp 2.5.1.15, 3.6.1.66 F Ham1 family
AFCCPELF_01381 6e-216 folP 2.5.1.15 H dihydropteroate synthase
AFCCPELF_01382 1.8e-43
AFCCPELF_01383 3.3e-40
AFCCPELF_01385 7.9e-166 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
AFCCPELF_01386 7.3e-152 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
AFCCPELF_01387 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
AFCCPELF_01388 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
AFCCPELF_01389 3.5e-40 yheA S Belongs to the UPF0342 family
AFCCPELF_01390 1.8e-220 yhaO L Ser Thr phosphatase family protein
AFCCPELF_01391 0.0 L AAA domain
AFCCPELF_01392 3.4e-129 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
AFCCPELF_01394 2.7e-76 hit FG histidine triad
AFCCPELF_01395 3.9e-136 ecsA V ABC transporter, ATP-binding protein
AFCCPELF_01396 5.1e-218 ecsB U ABC transporter
AFCCPELF_01397 1.1e-121 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
AFCCPELF_01398 7.7e-27 S YSIRK type signal peptide
AFCCPELF_01399 2.5e-35 2.1.1.72, 3.1.21.3 AA10,CBM73 L Belongs to the N(4) N(6)-methyltransferase family
AFCCPELF_01400 9.5e-256 2.1.1.72, 3.1.21.3 AA10,CBM73 L Belongs to the N(4) N(6)-methyltransferase family
AFCCPELF_01401 2.3e-145 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
AFCCPELF_01402 1.2e-100 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
AFCCPELF_01403 4.3e-183 iolS C Aldo keto reductase
AFCCPELF_01404 9.1e-167 glsA 3.5.1.2 E Belongs to the glutaminase family
AFCCPELF_01405 7.5e-58 ytzB S Small secreted protein
AFCCPELF_01406 1.7e-56 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
AFCCPELF_01407 1e-116 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
AFCCPELF_01408 7e-48 yafQ S Bacterial toxin of type II toxin-antitoxin system, YafQ
AFCCPELF_01409 1.3e-21 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
AFCCPELF_01410 1.9e-250 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
AFCCPELF_01411 1.9e-119 ybhL S Belongs to the BI1 family
AFCCPELF_01412 4.1e-116 yoaK S Protein of unknown function (DUF1275)
AFCCPELF_01413 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
AFCCPELF_01414 7.4e-160 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
AFCCPELF_01415 4.8e-100 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
AFCCPELF_01416 1.1e-80 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
AFCCPELF_01417 2.4e-200 dnaB L replication initiation and membrane attachment
AFCCPELF_01418 1.1e-170 dnaI L Primosomal protein DnaI
AFCCPELF_01419 3.7e-85 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
AFCCPELF_01420 2.3e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
AFCCPELF_01421 1.6e-55 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
AFCCPELF_01422 1.8e-95 yqeG S HAD phosphatase, family IIIA
AFCCPELF_01423 2.1e-218 yqeH S Ribosome biogenesis GTPase YqeH
AFCCPELF_01424 1.9e-47 yhbY J RNA-binding protein
AFCCPELF_01425 5.6e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
AFCCPELF_01426 1e-113 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
AFCCPELF_01427 4.9e-60 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
AFCCPELF_01428 1.7e-139 yqeM Q Methyltransferase
AFCCPELF_01429 4.6e-213 ylbM S Belongs to the UPF0348 family
AFCCPELF_01430 1.9e-98 yceD S Uncharacterized ACR, COG1399
AFCCPELF_01431 1.1e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
AFCCPELF_01432 1.5e-121 K response regulator
AFCCPELF_01433 4.1e-278 arlS 2.7.13.3 T Histidine kinase
AFCCPELF_01434 7.4e-267 yjeM E Amino Acid
AFCCPELF_01435 4.4e-231 V MatE
AFCCPELF_01436 8.7e-69 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
AFCCPELF_01437 5.9e-169 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
AFCCPELF_01438 7e-46 acyP 3.6.1.7 C Belongs to the acylphosphatase family
AFCCPELF_01439 3.1e-144 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AFCCPELF_01440 3.1e-92 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
AFCCPELF_01441 2e-58 yodB K Transcriptional regulator, HxlR family
AFCCPELF_01442 6.6e-198 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
AFCCPELF_01443 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
AFCCPELF_01444 5.6e-115 rlpA M PFAM NLP P60 protein
AFCCPELF_01445 3.3e-118 udk 2.7.1.48 F Cytidine monophosphokinase
AFCCPELF_01446 5.3e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
AFCCPELF_01447 7.6e-121 ybhL S Belongs to the BI1 family
AFCCPELF_01448 6.5e-81 yjcF 3.5.4.33, 4.4.1.8 K protein acetylation
AFCCPELF_01449 9.3e-197 S Protein of unknown function (DUF3114)
AFCCPELF_01450 3.7e-298 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
AFCCPELF_01451 1.3e-165 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
AFCCPELF_01452 1.1e-106 yvdD 3.2.2.10 S Belongs to the LOG family
AFCCPELF_01453 5.9e-61 S Domain of unknown function (DUF4828)
AFCCPELF_01454 4.5e-191 mocA S Oxidoreductase
AFCCPELF_01455 6.9e-229 yfmL L DEAD DEAH box helicase
AFCCPELF_01457 2.6e-208 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
AFCCPELF_01458 9.3e-56
AFCCPELF_01459 0.0 S SEC-C Motif Domain Protein
AFCCPELF_01460 5.2e-50
AFCCPELF_01461 3.9e-134 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
AFCCPELF_01462 2.4e-147 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
AFCCPELF_01463 5.1e-116 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
AFCCPELF_01464 1.8e-226 clcA_2 P Chloride transporter, ClC family
AFCCPELF_01465 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
AFCCPELF_01466 7.6e-112 lssY 3.6.1.27 I Acid phosphatase homologues
AFCCPELF_01468 4.3e-83 usp6 T universal stress protein
AFCCPELF_01469 4.4e-46
AFCCPELF_01470 1.7e-235 rarA L recombination factor protein RarA
AFCCPELF_01471 7.1e-86 yueI S Protein of unknown function (DUF1694)
AFCCPELF_01472 1.5e-21
AFCCPELF_01473 8.1e-75 4.4.1.5 E Glyoxalase
AFCCPELF_01474 2.5e-138 S Membrane
AFCCPELF_01475 2.5e-135 S Belongs to the UPF0246 family
AFCCPELF_01476 0.0 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
AFCCPELF_01477 2.7e-244 yagE E amino acid
AFCCPELF_01478 4.5e-140 aroD S Serine hydrolase (FSH1)
AFCCPELF_01479 8.2e-241 brnQ U Component of the transport system for branched-chain amino acids
AFCCPELF_01480 5.2e-167 GK ROK family
AFCCPELF_01481 0.0 tetP J elongation factor G
AFCCPELF_01482 5.1e-81 uspA T universal stress protein
AFCCPELF_01483 1.1e-194 lplA 6.3.1.20 H Lipoate-protein ligase
AFCCPELF_01484 7.1e-63
AFCCPELF_01485 5.2e-14
AFCCPELF_01489 1.4e-10
AFCCPELF_01491 5.2e-84 L Phage integrase, N-terminal SAM-like domain
AFCCPELF_01492 2e-36 L Single-strand binding protein family
AFCCPELF_01493 2.1e-103 L Replication initiation factor
AFCCPELF_01494 4e-19 yqfZ 3.2.1.17 M hydrolase, family 25
AFCCPELF_01495 5.3e-54 L Lactococcus lactis RepB C-terminus
AFCCPELF_01496 2.6e-90 L Integrase
AFCCPELF_01498 0.0 M domain protein
AFCCPELF_01499 1.9e-32
AFCCPELF_01500 1.5e-186 ampC V Beta-lactamase
AFCCPELF_01501 4.1e-239 arcA 3.5.3.6 E Arginine
AFCCPELF_01502 4.7e-79 argR K Regulates arginine biosynthesis genes
AFCCPELF_01503 2e-261 E Arginine ornithine antiporter
AFCCPELF_01504 2.7e-223 arcD U Amino acid permease
AFCCPELF_01505 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
AFCCPELF_01506 7.9e-35 copZ C Heavy-metal-associated domain
AFCCPELF_01507 6.7e-93 dps P Belongs to the Dps family
AFCCPELF_01508 5.8e-112 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
AFCCPELF_01509 4.9e-43 L PFAM Integrase catalytic region
AFCCPELF_01510 2.7e-26 K TRANSCRIPTIONal
AFCCPELF_01511 7.9e-61 pldB 3.1.1.5 I Serine aminopeptidase, S33
AFCCPELF_01512 5.6e-79 pncA Q Isochorismatase family
AFCCPELF_01513 4e-230 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
AFCCPELF_01514 4.2e-111 3.6.1.13, 3.6.1.55 F NUDIX domain
AFCCPELF_01515 2.2e-68 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
AFCCPELF_01516 3.3e-100 M LicC protein
AFCCPELF_01517 6.5e-214 2.7.1.89 M Nucleotidyl transferase
AFCCPELF_01518 5.6e-206 E Amino acid permease
AFCCPELF_01519 1.4e-61 ala 1.4.1.1 E Catalyzes the NAD( )-dependent oxidative deamination of L-alanine to pyruvate, and the reverse reaction, the reductive amination of pyruvate
AFCCPELF_01520 6.6e-190 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
AFCCPELF_01521 3.2e-153 yihY S Belongs to the UPF0761 family
AFCCPELF_01522 6.6e-34 S Protein of unknown function (DUF2922)
AFCCPELF_01523 4.9e-31
AFCCPELF_01524 7.4e-125 recX 2.4.1.337 GT4 S Regulatory protein RecX
AFCCPELF_01525 2.1e-145 cps1D M Domain of unknown function (DUF4422)
AFCCPELF_01526 1.1e-175 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
AFCCPELF_01527 5.9e-120 rfbP 2.7.8.6 M Bacterial sugar transferase
AFCCPELF_01528 0.0 2.7.7.6 M Peptidase family M23
AFCCPELF_01529 1.9e-172 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
AFCCPELF_01530 3e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
AFCCPELF_01531 2e-115 yjbM 2.7.6.5 S RelA SpoT domain protein
AFCCPELF_01532 4.7e-114 yjbH Q Thioredoxin
AFCCPELF_01533 9.2e-264 pipD E Dipeptidase
AFCCPELF_01534 2e-202 coiA 3.6.4.12 S Competence protein
AFCCPELF_01535 3.2e-121 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
AFCCPELF_01536 1.6e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
AFCCPELF_01537 3.5e-35
AFCCPELF_01538 2.5e-212 bacI V MacB-like periplasmic core domain
AFCCPELF_01539 4.4e-129 V ABC transporter
AFCCPELF_01540 5.7e-144 bacG M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AFCCPELF_01541 2.3e-259 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
AFCCPELF_01542 8.6e-145 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AFCCPELF_01543 9.4e-149 E Glyoxalase-like domain
AFCCPELF_01544 7.5e-155 glcU U sugar transport
AFCCPELF_01545 1.9e-225 dhaT 1.1.1.1, 1.1.1.202 C Dehydrogenase
AFCCPELF_01546 2.2e-96 S reductase
AFCCPELF_01547 5.2e-87 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
AFCCPELF_01548 4.7e-177 ABC-SBP S ABC transporter
AFCCPELF_01549 1.6e-88 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
AFCCPELF_01550 9.6e-215 htrA 3.4.21.107 O serine protease
AFCCPELF_01551 4.5e-154 vicX 3.1.26.11 S domain protein
AFCCPELF_01552 1e-148 yycI S YycH protein
AFCCPELF_01553 2.1e-246 yycH S YycH protein
AFCCPELF_01554 0.0 vicK 2.7.13.3 T Histidine kinase
AFCCPELF_01555 6.8e-130 K response regulator
AFCCPELF_01557 6.2e-310 lmrA 3.6.3.44 V ABC transporter
AFCCPELF_01558 3.3e-74 K helix_turn_helix multiple antibiotic resistance protein
AFCCPELF_01560 4.9e-216 L Integrase core domain
AFCCPELF_01561 4.8e-126 O Bacterial dnaA protein
AFCCPELF_01562 9.8e-09 K DNA-binding helix-turn-helix protein
AFCCPELF_01563 1.3e-157 S Polyphosphate nucleotide phosphotransferase, PPK2 family
AFCCPELF_01564 3.7e-54
AFCCPELF_01565 9.9e-206 yttB EGP Major facilitator Superfamily
AFCCPELF_01566 1.5e-234 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
AFCCPELF_01567 2e-74 rplI J Binds to the 23S rRNA
AFCCPELF_01568 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
AFCCPELF_01569 4.7e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AFCCPELF_01570 1.7e-78 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
AFCCPELF_01571 1.2e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
AFCCPELF_01572 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AFCCPELF_01573 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
AFCCPELF_01574 1.2e-205 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AFCCPELF_01575 1.7e-34 yaaA S S4 domain protein YaaA
AFCCPELF_01576 6.7e-10 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
AFCCPELF_01577 1.6e-81 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
AFCCPELF_01578 3.2e-206 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
AFCCPELF_01579 6.5e-251 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
AFCCPELF_01580 3.4e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
AFCCPELF_01581 2e-58 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
AFCCPELF_01582 4.5e-130 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
AFCCPELF_01583 1.4e-128 jag S R3H domain protein
AFCCPELF_01584 8.7e-254 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
AFCCPELF_01585 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
AFCCPELF_01586 0.0 asnB 6.3.5.4 E Asparagine synthase
AFCCPELF_01587 5.3e-292 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
AFCCPELF_01588 1.9e-247 yxbA 6.3.1.12 S ATP-grasp enzyme
AFCCPELF_01589 1.7e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
AFCCPELF_01590 9.1e-89 2.3.1.183 M Acetyltransferase GNAT family
AFCCPELF_01591 2.7e-160 S reductase
AFCCPELF_01593 6.1e-288 S amidohydrolase
AFCCPELF_01594 6.1e-163 K Aminotransferase class I and II
AFCCPELF_01595 7.3e-60 K Aminotransferase class I and II
AFCCPELF_01596 1.4e-119 azlC E azaleucine resistance protein AzlC
AFCCPELF_01597 7.1e-50 azlD E Branched-chain amino acid transport
AFCCPELF_01598 5.5e-118 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
AFCCPELF_01600 2.7e-70 S GyrI-like small molecule binding domain
AFCCPELF_01601 6.4e-39 S GyrI-like small molecule binding domain
AFCCPELF_01602 5e-122 yhiD S MgtC family
AFCCPELF_01603 3e-93 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
AFCCPELF_01604 5.9e-191 V Beta-lactamase
AFCCPELF_01605 4.8e-132 ponA V Beta-lactamase enzyme family
AFCCPELF_01606 1.7e-284 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
AFCCPELF_01607 2.6e-214 uhpT EGP Major facilitator Superfamily
AFCCPELF_01608 2.6e-255 ytjP 3.5.1.18 E Dipeptidase
AFCCPELF_01609 1.6e-183 arcD S C4-dicarboxylate anaerobic carrier
AFCCPELF_01610 2.9e-71 arcD S C4-dicarboxylate anaerobic carrier
AFCCPELF_01611 5.7e-29
AFCCPELF_01612 1.2e-133 mltD CBM50 M NlpC P60 family protein
AFCCPELF_01614 7.7e-58
AFCCPELF_01615 1e-207 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
AFCCPELF_01616 1.7e-219 EG GntP family permease
AFCCPELF_01617 8.5e-84 KT Putative sugar diacid recognition
AFCCPELF_01618 3.8e-226 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
AFCCPELF_01619 3.5e-163 S Tetratricopeptide repeat
AFCCPELF_01620 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
AFCCPELF_01621 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AFCCPELF_01622 5.1e-35 rpsT J Binds directly to 16S ribosomal RNA
AFCCPELF_01623 1.2e-146 holA 2.7.7.7 L DNA polymerase III delta subunit
AFCCPELF_01624 1.5e-17 NU Mycoplasma protein of unknown function, DUF285
AFCCPELF_01626 1.2e-157 metQ_4 P Belongs to the nlpA lipoprotein family
AFCCPELF_01627 4.4e-88 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
AFCCPELF_01628 1.2e-64 O Zinc-dependent metalloprotease
AFCCPELF_01629 1.2e-111 S Membrane
AFCCPELF_01630 2.3e-67 gtcA S Teichoic acid glycosylation protein
AFCCPELF_01631 6.1e-79 fld C Flavodoxin
AFCCPELF_01632 1.7e-167 map 3.4.11.18 E Methionine Aminopeptidase
AFCCPELF_01633 1.7e-220 arcT 2.6.1.1 E Aminotransferase
AFCCPELF_01634 3.6e-255 E Arginine ornithine antiporter
AFCCPELF_01635 2e-45 yrvD S Pfam:DUF1049
AFCCPELF_01636 3.6e-154 3.1.3.102, 3.1.3.104 S hydrolase
AFCCPELF_01637 8.1e-90 ntd 2.4.2.6 F Nucleoside
AFCCPELF_01638 1.3e-20
AFCCPELF_01639 2e-163 S Alpha/beta hydrolase of unknown function (DUF915)
AFCCPELF_01640 6.2e-114 yviA S Protein of unknown function (DUF421)
AFCCPELF_01641 9.1e-72 S Protein of unknown function (DUF3290)
AFCCPELF_01642 3.5e-285 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AFCCPELF_01643 1.6e-197 EGP Major facilitator Superfamily
AFCCPELF_01644 2.1e-88 ymdB S Macro domain protein
AFCCPELF_01645 8.4e-111 K Helix-turn-helix domain
AFCCPELF_01646 2.2e-49 ebh D nuclear chromosome segregation
AFCCPELF_01648 2.9e-32 UW LPXTG-motif cell wall anchor domain protein
AFCCPELF_01649 2.8e-28
AFCCPELF_01650 1.2e-131 cjaA ET ABC transporter substrate-binding protein
AFCCPELF_01651 1.4e-117 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
AFCCPELF_01652 1.1e-95 P ABC transporter permease
AFCCPELF_01653 9.9e-99 papP P ABC transporter, permease protein
AFCCPELF_01654 4.9e-224 oxlT P Major Facilitator Superfamily
AFCCPELF_01655 1.1e-158 spoU 2.1.1.185 J Methyltransferase
AFCCPELF_01656 2.8e-24
AFCCPELF_01663 3.6e-141 L Belongs to the 'phage' integrase family
AFCCPELF_01664 1.7e-11
AFCCPELF_01666 8.3e-20 E Zn peptidase
AFCCPELF_01667 6e-15 XK27_10050 K Peptidase S24-like
AFCCPELF_01669 5.7e-39
AFCCPELF_01672 1.2e-27
AFCCPELF_01675 5.7e-80 S Siphovirus Gp157
AFCCPELF_01676 1.2e-260 res L Helicase C-terminal domain protein
AFCCPELF_01677 1.9e-141 L AAA domain
AFCCPELF_01678 1.7e-93
AFCCPELF_01679 1.2e-146 S Bifunctional DNA primase/polymerase, N-terminal
AFCCPELF_01680 1.5e-236 S Virulence-associated protein E
AFCCPELF_01682 7.8e-58 S VRR_NUC
AFCCPELF_01684 1.7e-08 xre K Transcriptional
AFCCPELF_01685 2e-16
AFCCPELF_01689 4.7e-20
AFCCPELF_01694 4.2e-80 arpU S Phage transcriptional regulator, ArpU family
AFCCPELF_01696 7e-16 L Terminase small subunit
AFCCPELF_01698 4.8e-235 S Phage terminase, large subunit
AFCCPELF_01699 3.1e-270 S Phage portal protein
AFCCPELF_01700 6.3e-271 S Phage Mu protein F like protein
AFCCPELF_01702 5.3e-103 S Domain of unknown function (DUF4355)
AFCCPELF_01703 1e-154
AFCCPELF_01704 1.3e-64 S Phage gp6-like head-tail connector protein
AFCCPELF_01705 3.7e-51
AFCCPELF_01706 2.1e-67 S Bacteriophage HK97-gp10, putative tail-component
AFCCPELF_01707 1.1e-20 S Protein of unknown function (DUF3168)
AFCCPELF_01708 4.5e-103 S Phage tail tube protein
AFCCPELF_01709 3.2e-53 S Phage tail assembly chaperone protein, TAC
AFCCPELF_01710 2.7e-61
AFCCPELF_01711 7.3e-254 sca1 D Phage tail tape measure protein
AFCCPELF_01712 6.1e-148 S phage tail
AFCCPELF_01713 7.5e-303 M Prophage endopeptidase tail
AFCCPELF_01715 4e-41 S Domain of unknown function (DUF2479)
AFCCPELF_01719 6.3e-09 S by MetaGeneAnnotator
AFCCPELF_01721 4.2e-33
AFCCPELF_01722 7.6e-31 S Bacteriophage holin of superfamily 6 (Holin_LLH)
AFCCPELF_01723 1.1e-198 3.5.1.104 M hydrolase, family 25
AFCCPELF_01724 3.5e-97 2.3.1.128 K Acetyltransferase (GNAT) domain
AFCCPELF_01725 1.5e-237 lmrB EGP Major facilitator Superfamily
AFCCPELF_01726 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
AFCCPELF_01727 2e-111 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AFCCPELF_01728 7.5e-150 sufD O Uncharacterized protein family (UPF0051)
AFCCPELF_01729 2.6e-80 lytE M LysM domain protein
AFCCPELF_01730 0.0 oppD EP Psort location Cytoplasmic, score
AFCCPELF_01731 2.5e-92 lytE M LysM domain protein
AFCCPELF_01732 8.1e-154 yeaE S Aldo keto
AFCCPELF_01733 1.2e-76 hsp O Belongs to the small heat shock protein (HSP20) family
AFCCPELF_01734 2.8e-282 dinB 2.7.7.7 L impB/mucB/samB family C-terminal domain
AFCCPELF_01735 2.9e-78 S Psort location Cytoplasmic, score
AFCCPELF_01736 7.7e-86 S Short repeat of unknown function (DUF308)
AFCCPELF_01737 1e-23
AFCCPELF_01738 2.8e-102 V VanZ like family
AFCCPELF_01739 4.8e-233 cycA E Amino acid permease
AFCCPELF_01740 4.3e-85 perR P Belongs to the Fur family
AFCCPELF_01741 1.5e-253 EGP Major facilitator Superfamily
AFCCPELF_01742 9.6e-92 tag 3.2.2.20 L glycosylase
AFCCPELF_01743 5.6e-217 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
AFCCPELF_01744 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
AFCCPELF_01745 4.9e-41
AFCCPELF_01746 4.1e-303 ytgP S Polysaccharide biosynthesis protein
AFCCPELF_01747 7.1e-230 brpA K Cell envelope-like function transcriptional attenuator common domain protein
AFCCPELF_01748 1.1e-163 yueF S AI-2E family transporter
AFCCPELF_01749 3.2e-138 csd1 3.5.1.28 G domain, Protein
AFCCPELF_01750 4e-50 norA EGP Major facilitator Superfamily
AFCCPELF_01751 5.8e-40 1.3.5.4 S FMN binding
AFCCPELF_01752 9.3e-118 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AFCCPELF_01753 1e-265 yfnA E amino acid
AFCCPELF_01754 1.4e-51
AFCCPELF_01755 2.4e-113 frnE Q DSBA-like thioredoxin domain
AFCCPELF_01756 1.7e-78 I alpha/beta hydrolase fold
AFCCPELF_01757 8.5e-20 K Helix-turn-helix XRE-family like proteins
AFCCPELF_01758 2.6e-23 S Phage derived protein Gp49-like (DUF891)
AFCCPELF_01759 1.3e-260 S Putative peptidoglycan binding domain
AFCCPELF_01762 4e-264 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain
AFCCPELF_01763 3.2e-135 cobQ S CobB/CobQ-like glutamine amidotransferase domain
AFCCPELF_01764 1.7e-183 S Phosphotransferase system, EIIC
AFCCPELF_01765 2.4e-98 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
AFCCPELF_01766 5.5e-280 O Arylsulfotransferase (ASST)
AFCCPELF_01767 1.9e-83 L helicase activity
AFCCPELF_01769 1.8e-55 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
AFCCPELF_01770 2.9e-18
AFCCPELF_01772 5.4e-67 XK27_01125 L PFAM IS66 Orf2 family protein
AFCCPELF_01773 3.6e-64 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
AFCCPELF_01774 9.9e-261 yfnA E amino acid
AFCCPELF_01775 9.9e-143 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
AFCCPELF_01776 6.9e-92 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
AFCCPELF_01777 2e-39 ylqC S Belongs to the UPF0109 family
AFCCPELF_01778 2.2e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
AFCCPELF_01779 1.8e-249 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AFCCPELF_01780 1.3e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
AFCCPELF_01781 1.1e-172 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
AFCCPELF_01782 0.0 smc D Required for chromosome condensation and partitioning
AFCCPELF_01783 4.2e-132 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
AFCCPELF_01784 2.9e-38 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
AFCCPELF_01785 6.1e-188 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
AFCCPELF_01786 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AFCCPELF_01787 7.1e-311 yloV S DAK2 domain fusion protein YloV
AFCCPELF_01788 4.7e-58 asp S Asp23 family, cell envelope-related function
AFCCPELF_01789 7e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
AFCCPELF_01790 1.8e-121 thiN 2.7.6.2 H thiamine pyrophosphokinase
AFCCPELF_01791 1.5e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
AFCCPELF_01792 2.8e-165 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
AFCCPELF_01793 0.0 KLT serine threonine protein kinase
AFCCPELF_01794 2.9e-131 stp 3.1.3.16 T phosphatase
AFCCPELF_01795 1.6e-249 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
AFCCPELF_01796 4e-173 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
AFCCPELF_01797 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AFCCPELF_01798 6.9e-215 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AFCCPELF_01799 7.7e-32 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
AFCCPELF_01800 4.2e-115 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
AFCCPELF_01801 1.7e-54
AFCCPELF_01802 1.9e-263 recN L May be involved in recombinational repair of damaged DNA
AFCCPELF_01803 3.3e-77 argR K Regulates arginine biosynthesis genes
AFCCPELF_01804 1.1e-150 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
AFCCPELF_01805 5.1e-159 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
AFCCPELF_01806 4.3e-43 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
AFCCPELF_01807 5.3e-224 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
AFCCPELF_01808 7.2e-150 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
AFCCPELF_01809 1.2e-70 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
AFCCPELF_01810 2.2e-70 yqhY S Asp23 family, cell envelope-related function
AFCCPELF_01811 1.7e-114 J 2'-5' RNA ligase superfamily
AFCCPELF_01812 5.1e-201 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
AFCCPELF_01813 2.1e-131 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AFCCPELF_01814 2.1e-45 rpmA J Belongs to the bacterial ribosomal protein bL27 family
AFCCPELF_01815 1.6e-54 ysxB J Cysteine protease Prp
AFCCPELF_01816 5.2e-50 rplU J This protein binds to 23S rRNA in the presence of protein L20
AFCCPELF_01817 8.3e-111 K Transcriptional regulator
AFCCPELF_01821 2.5e-89 dut S Protein conserved in bacteria
AFCCPELF_01822 6.6e-174
AFCCPELF_01823 1e-151
AFCCPELF_01824 3.7e-51 S Iron-sulfur cluster assembly protein
AFCCPELF_01825 1.4e-100 msrA 1.8.4.11, 1.8.4.12 C Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
AFCCPELF_01826 3.1e-153 P Belongs to the nlpA lipoprotein family
AFCCPELF_01827 3.9e-12
AFCCPELF_01828 4.8e-221 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
AFCCPELF_01829 3.4e-296 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
AFCCPELF_01830 2.4e-261 glnA 6.3.1.2 E glutamine synthetase
AFCCPELF_01831 3.3e-177 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
AFCCPELF_01832 5.9e-22 S Protein of unknown function (DUF3042)
AFCCPELF_01833 3.4e-67 yqhL P Rhodanese-like protein
AFCCPELF_01834 5.6e-183 glk 2.7.1.2 G Glucokinase
AFCCPELF_01835 7.4e-36 yqgQ S Bacterial protein of unknown function (DUF910)
AFCCPELF_01836 1.1e-45 gluP 3.4.21.105 S Peptidase, S54 family
AFCCPELF_01837 3.4e-12 gluP 3.4.21.105 S Peptidase, S54 family
AFCCPELF_01838 2.6e-100 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AFCCPELF_01839 4.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
AFCCPELF_01840 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
AFCCPELF_01841 0.0 S membrane
AFCCPELF_01842 8.8e-71 yneR S Belongs to the HesB IscA family
AFCCPELF_01843 5.7e-310 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
AFCCPELF_01844 2.6e-280 yjeM E Amino Acid
AFCCPELF_01845 1.6e-67 yqkB S Belongs to the HesB IscA family
AFCCPELF_01846 2.7e-49
AFCCPELF_01848 4.1e-89 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
AFCCPELF_01849 1e-73
AFCCPELF_01850 3.5e-24
AFCCPELF_01851 3.8e-106 tra L Transposase and inactivated derivatives, IS30 family
AFCCPELF_01852 1.9e-147 2.3.1.19 K Helix-turn-helix XRE-family like proteins
AFCCPELF_01853 5.1e-184 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
AFCCPELF_01854 8.6e-237 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
AFCCPELF_01855 3.9e-262 argH 4.3.2.1 E argininosuccinate lyase
AFCCPELF_01856 9.6e-90 bioY S BioY family
AFCCPELF_01857 5.6e-175 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
AFCCPELF_01858 1.2e-183 phoH T phosphate starvation-inducible protein PhoH
AFCCPELF_01859 1.9e-83 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
AFCCPELF_01860 9.9e-62 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
AFCCPELF_01861 1.9e-169 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
AFCCPELF_01862 6.8e-147 recO L Involved in DNA repair and RecF pathway recombination
AFCCPELF_01863 2e-180 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
AFCCPELF_01864 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
AFCCPELF_01865 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
AFCCPELF_01866 1.9e-206 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
AFCCPELF_01867 1.2e-219 patA 2.6.1.1 E Aminotransferase
AFCCPELF_01868 9.6e-124 trmK 2.1.1.217 S SAM-dependent methyltransferase
AFCCPELF_01869 1.2e-157 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AFCCPELF_01870 7.3e-236 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
AFCCPELF_01871 3e-30 S Protein of unknown function (DUF2929)
AFCCPELF_01872 0.0 dnaE 2.7.7.7 L DNA polymerase
AFCCPELF_01873 2.1e-271 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
AFCCPELF_01874 2.3e-167 cvfB S S1 domain
AFCCPELF_01875 1.2e-163 xerD D recombinase XerD
AFCCPELF_01876 1.5e-64 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
AFCCPELF_01877 7.6e-138 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
AFCCPELF_01878 7.7e-106 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
AFCCPELF_01879 3.8e-128 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
AFCCPELF_01880 1.5e-103 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
AFCCPELF_01881 9.1e-192 ypbB 5.1.3.1 S Helix-turn-helix domain
AFCCPELF_01882 1.5e-269 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
AFCCPELF_01883 8.5e-14 M Lysin motif
AFCCPELF_01884 3.4e-118 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
AFCCPELF_01885 5.1e-205 rpsA 1.17.7.4 J Ribosomal protein S1
AFCCPELF_01886 7.2e-250 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
AFCCPELF_01887 2.6e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
AFCCPELF_01888 1.5e-236 S Tetratricopeptide repeat protein
AFCCPELF_01889 9.6e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
AFCCPELF_01890 0.0 yfmR S ABC transporter, ATP-binding protein
AFCCPELF_01891 7.7e-193 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
AFCCPELF_01892 1.9e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
AFCCPELF_01893 5.3e-113 hlyIII S protein, hemolysin III
AFCCPELF_01894 3.8e-151 DegV S EDD domain protein, DegV family
AFCCPELF_01895 9.5e-172 ypmR E lipolytic protein G-D-S-L family
AFCCPELF_01896 1.6e-108 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
AFCCPELF_01897 4.4e-35 yozE S Belongs to the UPF0346 family
AFCCPELF_01898 4.1e-161 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
AFCCPELF_01899 1.2e-140 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
AFCCPELF_01900 2.4e-161 dprA LU DNA protecting protein DprA
AFCCPELF_01901 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AFCCPELF_01902 4.3e-166 lacX 5.1.3.3 G Aldose 1-epimerase
AFCCPELF_01903 1.5e-107 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
AFCCPELF_01904 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
AFCCPELF_01905 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
AFCCPELF_01906 1.7e-84 F NUDIX domain
AFCCPELF_01907 6.6e-173 ppaC 3.6.1.1 C inorganic pyrophosphatase
AFCCPELF_01908 2.6e-126 L Transposase and inactivated derivatives IS30 family
AFCCPELF_01909 1.3e-99 L Helix-turn-helix domain

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)