ORF_ID e_value Gene_name EC_number CAZy COGs Description
JOJBGKCH_00001 1.2e-85 S COG NOG38524 non supervised orthologous group
JOJBGKCH_00004 1.4e-98 L Helix-turn-helix domain
JOJBGKCH_00005 1.5e-138 L hmm pf00665
JOJBGKCH_00006 9.3e-136 UW LPXTG-motif cell wall anchor domain protein
JOJBGKCH_00007 9.3e-196 UW LPXTG-motif cell wall anchor domain protein
JOJBGKCH_00008 9.6e-45 UW LPXTG-motif cell wall anchor domain protein
JOJBGKCH_00009 1.1e-19 UW LPXTG-motif cell wall anchor domain protein
JOJBGKCH_00010 1.8e-237 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JOJBGKCH_00011 3.7e-99 J Acetyltransferase (GNAT) domain
JOJBGKCH_00012 1.4e-110 yjbF S SNARE associated Golgi protein
JOJBGKCH_00013 7.2e-228 L Transposase
JOJBGKCH_00014 8.4e-70 S cog cog1373
JOJBGKCH_00015 6.2e-93 F Nucleoside 2-deoxyribosyltransferase
JOJBGKCH_00016 2.1e-188 L COG2826 Transposase and inactivated derivatives, IS30 family
JOJBGKCH_00018 1.1e-259 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
JOJBGKCH_00019 4e-226 L COG3547 Transposase and inactivated derivatives
JOJBGKCH_00020 3.4e-107
JOJBGKCH_00021 0.0 ydgH S MMPL family
JOJBGKCH_00022 5.1e-99 yobS K Bacterial regulatory proteins, tetR family
JOJBGKCH_00023 3.3e-148 3.5.2.6 V Beta-lactamase enzyme family
JOJBGKCH_00024 1.8e-154 corA P CorA-like Mg2+ transporter protein
JOJBGKCH_00025 5.1e-240 G Bacterial extracellular solute-binding protein
JOJBGKCH_00026 2.4e-258 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
JOJBGKCH_00027 6.1e-146 gtsC P Binding-protein-dependent transport system inner membrane component
JOJBGKCH_00028 1.6e-157 gtsB P ABC-type sugar transport systems, permease components
JOJBGKCH_00029 9.3e-203 malK P ATPases associated with a variety of cellular activities
JOJBGKCH_00030 1.6e-282 pipD E Dipeptidase
JOJBGKCH_00031 1.9e-158 endA F DNA RNA non-specific endonuclease
JOJBGKCH_00032 1e-181 dnaQ 2.7.7.7 L EXOIII
JOJBGKCH_00033 5.8e-157 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
JOJBGKCH_00034 3e-116 yviA S Protein of unknown function (DUF421)
JOJBGKCH_00035 1.1e-56 S Protein of unknown function (DUF3290)
JOJBGKCH_00036 3.5e-222 L Transposase
JOJBGKCH_00038 3.8e-139 pnuC H nicotinamide mononucleotide transporter
JOJBGKCH_00039 4.8e-228 L COG2963 Transposase and inactivated derivatives
JOJBGKCH_00040 4e-08
JOJBGKCH_00041 6.6e-56
JOJBGKCH_00042 2.7e-57
JOJBGKCH_00043 1.6e-11
JOJBGKCH_00044 1.5e-124 S PAS domain
JOJBGKCH_00045 1.1e-163 L An automated process has identified a potential problem with this gene model
JOJBGKCH_00046 2.9e-277 V ABC transporter transmembrane region
JOJBGKCH_00047 2.1e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
JOJBGKCH_00048 3.1e-130 T Transcriptional regulatory protein, C terminal
JOJBGKCH_00049 5.2e-187 T GHKL domain
JOJBGKCH_00050 5.8e-76 S Peptidase propeptide and YPEB domain
JOJBGKCH_00051 2.5e-72 S Peptidase propeptide and YPEB domain
JOJBGKCH_00052 4.7e-83 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
JOJBGKCH_00053 3.8e-65 yybA 2.3.1.57 K Transcriptional regulator
JOJBGKCH_00054 7e-68 V ABC transporter transmembrane region
JOJBGKCH_00055 9e-161 V ABC transporter transmembrane region
JOJBGKCH_00056 6.7e-223 L Transposase
JOJBGKCH_00057 2.3e-309 oppA3 E ABC transporter, substratebinding protein
JOJBGKCH_00058 2.4e-60 ypaA S Protein of unknown function (DUF1304)
JOJBGKCH_00059 2.1e-28 S Peptidase propeptide and YPEB domain
JOJBGKCH_00060 3.5e-236 L transposase, IS605 OrfB family
JOJBGKCH_00061 3e-112 L PFAM transposase IS116 IS110 IS902
JOJBGKCH_00062 8.8e-58 S Peptidase propeptide and YPEB domain
JOJBGKCH_00063 1.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JOJBGKCH_00064 7.4e-169 coaA 2.7.1.33 F Pantothenic acid kinase
JOJBGKCH_00065 7.1e-98 E GDSL-like Lipase/Acylhydrolase
JOJBGKCH_00066 7.5e-74 yjcF S Acetyltransferase (GNAT) domain
JOJBGKCH_00067 1.6e-143 aatB ET ABC transporter substrate-binding protein
JOJBGKCH_00068 1e-105 glnQ 3.6.3.21 E ABC transporter
JOJBGKCH_00069 1.5e-107 glnP P ABC transporter permease
JOJBGKCH_00070 0.0 helD 3.6.4.12 L DNA helicase
JOJBGKCH_00071 2.3e-116 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
JOJBGKCH_00072 1.4e-126 pgm3 G Phosphoglycerate mutase family
JOJBGKCH_00073 1.2e-241 S response to antibiotic
JOJBGKCH_00074 2.1e-123
JOJBGKCH_00075 0.0 3.6.3.8 P P-type ATPase
JOJBGKCH_00076 4.3e-65 2.7.1.191 G PTS system fructose IIA component
JOJBGKCH_00077 4.4e-43
JOJBGKCH_00078 5.9e-09
JOJBGKCH_00079 4.8e-183 L DDE superfamily endonuclease
JOJBGKCH_00080 1.5e-186 ansA 3.5.1.1 EJ L-asparaginase, type I
JOJBGKCH_00081 5.3e-136 glvR K Helix-turn-helix domain, rpiR family
JOJBGKCH_00082 2.7e-268 aglB 3.2.1.122, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase C-terminal domain
JOJBGKCH_00083 1.5e-152
JOJBGKCH_00084 1.1e-158 L Transposase
JOJBGKCH_00085 5.2e-56 L Transposase
JOJBGKCH_00086 3e-24
JOJBGKCH_00087 2.3e-93 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
JOJBGKCH_00088 1.8e-104 3.2.2.20 K acetyltransferase
JOJBGKCH_00090 1.2e-225 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JOJBGKCH_00091 4.9e-82 rarA L MgsA AAA+ ATPase C terminal
JOJBGKCH_00092 2.2e-101 K Helix-turn-helix domain, rpiR family
JOJBGKCH_00093 1.8e-104 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_00094 1.1e-66 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_00095 0.0 mngB 3.2.1.170, 3.2.1.24 GH38 G Glycosyl hydrolases family 38 N-terminal domain
JOJBGKCH_00096 6.2e-36 licR 2.7.1.200, 2.7.1.202 G Mga helix-turn-helix domain
JOJBGKCH_00097 4.8e-228 L COG2963 Transposase and inactivated derivatives
JOJBGKCH_00098 7.2e-228 L COG3547 Transposase and inactivated derivatives
JOJBGKCH_00099 3.8e-93 licR 2.7.1.194, 2.7.1.200, 2.7.1.202 GKT domain protein
JOJBGKCH_00100 1.2e-280 ybgG 3.2.1.170 GH38 G Glycosyl hydrolases family 38 N-terminal domain
JOJBGKCH_00101 1.4e-150 mngA 2.7.1.195, 2.7.1.202 U system, fructose-specific IIC component
JOJBGKCH_00102 5.3e-37 mngA 2.7.1.195, 2.7.1.202 G Psort location Cytoplasmic, score 9.98
JOJBGKCH_00103 2e-42 fryA 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JOJBGKCH_00104 3e-112 L PFAM transposase IS116 IS110 IS902
JOJBGKCH_00105 8e-150 S Metal-independent alpha-mannosidase (GH125)
JOJBGKCH_00106 6.7e-223 L Transposase
JOJBGKCH_00108 3.8e-184 manA 5.3.1.8 G mannose-6-phosphate isomerase
JOJBGKCH_00109 2.7e-155 L Transposase
JOJBGKCH_00113 1.4e-192 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_00114 3.7e-27 L Transposase
JOJBGKCH_00115 3.3e-119 L Transposase
JOJBGKCH_00116 4.9e-172 2.7.1.202 GKT Mga helix-turn-helix domain
JOJBGKCH_00117 2.9e-48 5.3.1.27 M SIS domain
JOJBGKCH_00118 9.4e-64 kdsD 5.3.1.13 M SIS domain
JOJBGKCH_00119 1.4e-76 S Uncharacterised protein family UPF0047
JOJBGKCH_00120 7.6e-35 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
JOJBGKCH_00121 7.9e-201 G PTS system sugar-specific permease component
JOJBGKCH_00122 1.5e-40 2.7.1.200, 2.7.1.202 GT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JOJBGKCH_00123 1.7e-66 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
JOJBGKCH_00124 8.5e-151 S Membrane protein involved in the export of O-antigen and teichoic acid
JOJBGKCH_00125 4.3e-74 epsJ_2 M Glycosyltransferase like family 2
JOJBGKCH_00127 2.9e-72 S Bacterial transferase hexapeptide (six repeats)
JOJBGKCH_00128 1.5e-88 fcbD 2.7.8.12 GT2 M Glycosyltransferase like family 2
JOJBGKCH_00129 2.4e-52 Z012_10770 M Domain of unknown function (DUF1919)
JOJBGKCH_00130 2e-104 GT4 M Glycosyl transferases group 1
JOJBGKCH_00131 1.3e-74 pssE S Glycosyltransferase family 28 C-terminal domain
JOJBGKCH_00132 1.7e-78 cpsF M Oligosaccharide biosynthesis protein Alg14 like
JOJBGKCH_00133 7.2e-158 M Glycosyltransferase
JOJBGKCH_00134 9.1e-121 rfbP M Bacterial sugar transferase
JOJBGKCH_00135 3.7e-145 ywqE 3.1.3.48 GM PHP domain protein
JOJBGKCH_00136 2.2e-121 ywqD 2.7.10.1 D Capsular exopolysaccharide family
JOJBGKCH_00137 3.6e-144 epsB M biosynthesis protein
JOJBGKCH_00138 1.7e-177 brpA K Cell envelope-like function transcriptional attenuator common domain protein
JOJBGKCH_00139 4.8e-183 L DDE superfamily endonuclease
JOJBGKCH_00141 1.7e-29 S Predicted membrane protein (DUF2335)
JOJBGKCH_00143 1.5e-215 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JOJBGKCH_00144 3.5e-175 S Cysteine-rich secretory protein family
JOJBGKCH_00145 3.5e-41
JOJBGKCH_00146 2.6e-118 M NlpC/P60 family
JOJBGKCH_00147 1.4e-136 M NlpC P60 family protein
JOJBGKCH_00148 2e-89 M NlpC/P60 family
JOJBGKCH_00149 7.7e-89 gmk2 2.7.4.8 F Guanylate kinase homologues.
JOJBGKCH_00150 3.9e-42
JOJBGKCH_00151 6.5e-279 S O-antigen ligase like membrane protein
JOJBGKCH_00152 3.3e-112
JOJBGKCH_00153 2.3e-223 tnpB L Putative transposase DNA-binding domain
JOJBGKCH_00154 5.5e-77 nrdI F NrdI Flavodoxin like
JOJBGKCH_00155 9.9e-177 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JOJBGKCH_00156 2.5e-68
JOJBGKCH_00157 9.1e-112 yvpB S Peptidase_C39 like family
JOJBGKCH_00158 1.4e-192 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_00159 1.1e-75 S Threonine/Serine exporter, ThrE
JOJBGKCH_00160 2.4e-136 thrE S Putative threonine/serine exporter
JOJBGKCH_00161 8.9e-292 S ABC transporter
JOJBGKCH_00162 8.3e-58
JOJBGKCH_00163 1.2e-97 rimL J Acetyltransferase (GNAT) domain
JOJBGKCH_00164 5.6e-19
JOJBGKCH_00165 8.2e-61
JOJBGKCH_00166 6.5e-125 S Protein of unknown function (DUF554)
JOJBGKCH_00167 2.2e-208 brpA K Cell envelope-like function transcriptional attenuator common domain protein
JOJBGKCH_00168 0.0 pepF E oligoendopeptidase F
JOJBGKCH_00169 7.4e-40 S Enterocin A Immunity
JOJBGKCH_00170 3e-134 S CAAX amino terminal protease
JOJBGKCH_00174 5e-47 2.4.1.33 V HlyD family secretion protein
JOJBGKCH_00175 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
JOJBGKCH_00176 2.9e-79 K LytTr DNA-binding domain
JOJBGKCH_00177 1.4e-78 2.7.13.3 T GHKL domain
JOJBGKCH_00180 1.2e-216 L Transposase
JOJBGKCH_00181 6.4e-196 S Uncharacterised protein family (UPF0236)
JOJBGKCH_00182 8.1e-210 L Transposase
JOJBGKCH_00183 7.3e-86 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
JOJBGKCH_00184 4.1e-78 K LytTr DNA-binding domain
JOJBGKCH_00185 8.3e-76 2.7.13.3 T GHKL domain
JOJBGKCH_00186 1.9e-200 L Transposase
JOJBGKCH_00188 5.1e-13 L DDE superfamily endonuclease
JOJBGKCH_00189 3.7e-157 L DDE superfamily endonuclease
JOJBGKCH_00191 1.7e-28 mloB K Putative ATP-dependent DNA helicase recG C-terminal
JOJBGKCH_00192 3.5e-248 lctP C L-lactate permease
JOJBGKCH_00193 1.3e-233 L Transposase DDE domain
JOJBGKCH_00194 5e-129 znuB U ABC 3 transport family
JOJBGKCH_00195 1.6e-117 fhuC P ABC transporter
JOJBGKCH_00196 1.4e-148 psaA P Belongs to the bacterial solute-binding protein 9 family
JOJBGKCH_00197 5.4e-41 K helix_turn_helix, Arsenical Resistance Operon Repressor
JOJBGKCH_00198 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphotransferase System
JOJBGKCH_00199 2.2e-168 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
JOJBGKCH_00200 1.8e-136 fruR K DeoR C terminal sensor domain
JOJBGKCH_00201 1.8e-218 natB CP ABC-2 family transporter protein
JOJBGKCH_00202 1.1e-164 natA S ABC transporter, ATP-binding protein
JOJBGKCH_00203 1.7e-67
JOJBGKCH_00204 2e-23
JOJBGKCH_00205 8.2e-31 yozG K Transcriptional regulator
JOJBGKCH_00206 3.7e-83
JOJBGKCH_00207 3e-21
JOJBGKCH_00211 2.2e-129 blpT
JOJBGKCH_00212 1.4e-107 M Transport protein ComB
JOJBGKCH_00213 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
JOJBGKCH_00214 1.2e-127 K LytTr DNA-binding domain
JOJBGKCH_00215 4.4e-138 2.7.13.3 T GHKL domain
JOJBGKCH_00216 1.2e-16
JOJBGKCH_00217 2.1e-255 S Archaea bacterial proteins of unknown function
JOJBGKCH_00218 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
JOJBGKCH_00219 3e-270 glcD2 1.1.3.15 C FAD linked oxidases, C-terminal domain
JOJBGKCH_00220 1e-24
JOJBGKCH_00221 9.5e-26
JOJBGKCH_00222 2.5e-33
JOJBGKCH_00223 1.4e-53 S Enterocin A Immunity
JOJBGKCH_00224 8e-145 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
JOJBGKCH_00225 5.5e-305 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JOJBGKCH_00226 6.6e-207 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
JOJBGKCH_00227 9.6e-121 K response regulator
JOJBGKCH_00228 0.0 V ABC transporter
JOJBGKCH_00229 4.2e-144 V ABC transporter, ATP-binding protein
JOJBGKCH_00230 1.2e-145 V ABC transporter, ATP-binding protein
JOJBGKCH_00231 3.8e-137 XK27_01040 S Protein of unknown function (DUF1129)
JOJBGKCH_00232 3.6e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
JOJBGKCH_00233 2.8e-44 yyzM S Bacterial protein of unknown function (DUF951)
JOJBGKCH_00234 1.5e-153 spo0J K Belongs to the ParB family
JOJBGKCH_00235 3.4e-138 soj D Sporulation initiation inhibitor
JOJBGKCH_00236 5e-148 noc K Belongs to the ParB family
JOJBGKCH_00237 1.2e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
JOJBGKCH_00238 3e-53 cvpA S Colicin V production protein
JOJBGKCH_00240 2.5e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
JOJBGKCH_00241 6e-151 3.1.3.48 T Tyrosine phosphatase family
JOJBGKCH_00242 2e-97 azr 1.5.1.36 S NADPH-dependent FMN reductase
JOJBGKCH_00243 6.4e-96 nqr 1.5.1.36 S NADPH-dependent FMN reductase
JOJBGKCH_00244 3.7e-111 K WHG domain
JOJBGKCH_00245 2e-199 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_00246 3.4e-274 pipD E Dipeptidase
JOJBGKCH_00247 1.5e-102 devA 3.6.3.25 V ABC transporter, ATP-binding protein
JOJBGKCH_00248 3.3e-176 hrtB V ABC transporter permease
JOJBGKCH_00249 1e-90 ygfC K Bacterial regulatory proteins, tetR family
JOJBGKCH_00250 3.5e-111 G phosphoglycerate mutase
JOJBGKCH_00251 1.3e-139 aroD S Alpha/beta hydrolase family
JOJBGKCH_00252 2.2e-142 S Belongs to the UPF0246 family
JOJBGKCH_00253 2.6e-120
JOJBGKCH_00254 1.9e-157 2.7.7.12 C Domain of unknown function (DUF4931)
JOJBGKCH_00255 1.1e-192 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_00256 1.2e-190 S Putative peptidoglycan binding domain
JOJBGKCH_00257 4e-16
JOJBGKCH_00258 7.9e-92 liaI S membrane
JOJBGKCH_00259 1.7e-70 XK27_02470 K LytTr DNA-binding domain
JOJBGKCH_00261 1.5e-219 L Transposase
JOJBGKCH_00262 5.3e-249 dtpT U amino acid peptide transporter
JOJBGKCH_00263 2.4e-35 L Transposase DDE domain
JOJBGKCH_00264 3.7e-260 L Transposase
JOJBGKCH_00265 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JOJBGKCH_00266 3.2e-74 nrdI F NrdI Flavodoxin like
JOJBGKCH_00267 8.9e-192 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JOJBGKCH_00268 1.7e-280 phoR 2.7.13.3 T Histidine kinase
JOJBGKCH_00269 1.5e-118 T Transcriptional regulatory protein, C terminal
JOJBGKCH_00270 1.2e-104 phoU P Plays a role in the regulation of phosphate uptake
JOJBGKCH_00271 4.3e-138 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
JOJBGKCH_00272 1.9e-150 pstA P Phosphate transport system permease protein PstA
JOJBGKCH_00273 8.7e-154 pstC P probably responsible for the translocation of the substrate across the membrane
JOJBGKCH_00274 6.5e-146 pstS P Phosphate
JOJBGKCH_00275 3.2e-26 xerC L Phage integrase, N-terminal SAM-like domain
JOJBGKCH_00276 3.3e-81 yveB 2.7.4.29 I PAP2 superfamily
JOJBGKCH_00277 0.0 pepN 3.4.11.2 E aminopeptidase
JOJBGKCH_00278 2.8e-47 lysM M LysM domain
JOJBGKCH_00279 7.4e-175
JOJBGKCH_00280 4.3e-212 mdtG EGP Major facilitator Superfamily
JOJBGKCH_00281 6.7e-88 ymdB S Macro domain protein
JOJBGKCH_00283 6.7e-09
JOJBGKCH_00284 1.6e-28
JOJBGKCH_00287 1.5e-59 K Helix-turn-helix XRE-family like proteins
JOJBGKCH_00288 3.3e-147 malG P ABC transporter permease
JOJBGKCH_00289 1.1e-250 malF P Binding-protein-dependent transport system inner membrane component
JOJBGKCH_00290 2.3e-213 malE G Bacterial extracellular solute-binding protein
JOJBGKCH_00291 3e-209 msmX P Belongs to the ABC transporter superfamily
JOJBGKCH_00292 1.4e-116 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
JOJBGKCH_00293 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
JOJBGKCH_00294 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
JOJBGKCH_00295 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
JOJBGKCH_00296 9.1e-77 S PAS domain
JOJBGKCH_00297 9.1e-204 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JOJBGKCH_00298 3.1e-178 yvdE K helix_turn _helix lactose operon repressor
JOJBGKCH_00299 7e-144 ptp2 3.1.3.48 T Tyrosine phosphatase family
JOJBGKCH_00300 1e-292 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JOJBGKCH_00301 9.6e-152 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
JOJBGKCH_00302 2.3e-18
JOJBGKCH_00303 4e-137 K Helix-turn-helix XRE-family like proteins
JOJBGKCH_00305 2.3e-121 V Abi-like protein
JOJBGKCH_00306 9.9e-197 S Uncharacterised protein family (UPF0236)
JOJBGKCH_00307 6.8e-186 G Transmembrane secretion effector
JOJBGKCH_00308 2.6e-201 V ABC transporter transmembrane region
JOJBGKCH_00309 6.5e-64 L RelB antitoxin
JOJBGKCH_00310 2.1e-131 cobQ S glutamine amidotransferase
JOJBGKCH_00311 1.1e-81 M NlpC/P60 family
JOJBGKCH_00313 2.7e-141 L An automated process has identified a potential problem with this gene model
JOJBGKCH_00314 2.3e-36
JOJBGKCH_00315 3.9e-165 EG EamA-like transporter family
JOJBGKCH_00316 5.9e-166 EG EamA-like transporter family
JOJBGKCH_00317 7.3e-83 yicL EG EamA-like transporter family
JOJBGKCH_00318 3.5e-83
JOJBGKCH_00319 1.2e-109
JOJBGKCH_00320 5.4e-15 XK27_05540 S DUF218 domain
JOJBGKCH_00321 8.8e-145 XK27_05540 S DUF218 domain
JOJBGKCH_00322 4.9e-265 yheS_2 S ATPases associated with a variety of cellular activities
JOJBGKCH_00323 7.2e-86
JOJBGKCH_00324 3.9e-57
JOJBGKCH_00325 4.7e-25 S Protein conserved in bacteria
JOJBGKCH_00326 1.3e-54 S protein encoded in hypervariable junctions of pilus gene clusters
JOJBGKCH_00328 2.6e-222 L Transposase
JOJBGKCH_00329 7.3e-21 hicA S HicA toxin of bacterial toxin-antitoxin,
JOJBGKCH_00330 2.8e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JOJBGKCH_00331 3.2e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
JOJBGKCH_00332 7.7e-188 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
JOJBGKCH_00335 3.9e-206 4.2.1.126 S Bacterial protein of unknown function (DUF871)
JOJBGKCH_00336 3.2e-189 asnA 6.3.1.1 F aspartate--ammonia ligase
JOJBGKCH_00337 1.8e-230 steT_1 E amino acid
JOJBGKCH_00338 2.2e-139 puuD S peptidase C26
JOJBGKCH_00340 2.4e-172 V HNH endonuclease
JOJBGKCH_00341 6.4e-135 S PFAM Archaeal ATPase
JOJBGKCH_00342 9.2e-248 yifK E Amino acid permease
JOJBGKCH_00343 9.7e-234 cycA E Amino acid permease
JOJBGKCH_00344 4.3e-115 lepB 3.4.21.89 U Belongs to the peptidase S26 family
JOJBGKCH_00345 0.0 clpE O AAA domain (Cdc48 subfamily)
JOJBGKCH_00346 2.2e-165 S Alpha/beta hydrolase of unknown function (DUF915)
JOJBGKCH_00347 2.2e-238 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JOJBGKCH_00348 5.1e-125 XK27_06785 V ABC transporter, ATP-binding protein
JOJBGKCH_00349 0.0 XK27_06780 V ABC transporter permease
JOJBGKCH_00350 1.9e-36
JOJBGKCH_00351 7.9e-291 ytgP S Polysaccharide biosynthesis protein
JOJBGKCH_00352 2.7e-137 lysA2 M Glycosyl hydrolases family 25
JOJBGKCH_00353 6.7e-133 S Protein of unknown function (DUF975)
JOJBGKCH_00354 7.6e-177 pbpX2 V Beta-lactamase
JOJBGKCH_00355 1.5e-247 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
JOJBGKCH_00356 1.7e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JOJBGKCH_00357 1.9e-236 dltB M MBOAT, membrane-bound O-acyltransferase family
JOJBGKCH_00358 2.1e-285 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JOJBGKCH_00359 1.2e-18 S D-Ala-teichoic acid biosynthesis protein
JOJBGKCH_00360 4.5e-43
JOJBGKCH_00361 1e-207 ywhK S Membrane
JOJBGKCH_00362 1.5e-80 ykuL S (CBS) domain
JOJBGKCH_00363 0.0 cadA P P-type ATPase
JOJBGKCH_00364 2.8e-205 napA P Sodium/hydrogen exchanger family
JOJBGKCH_00365 1.9e-47 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
JOJBGKCH_00366 2.3e-41 S YoeB-like toxin of bacterial type II toxin-antitoxin system
JOJBGKCH_00367 4.1e-276 V ABC transporter transmembrane region
JOJBGKCH_00368 2.6e-155 mutR K Helix-turn-helix XRE-family like proteins
JOJBGKCH_00369 5.4e-51
JOJBGKCH_00370 4.2e-154 EGP Major facilitator Superfamily
JOJBGKCH_00371 1.6e-109 ropB K Transcriptional regulator
JOJBGKCH_00372 9.1e-121 S CAAX protease self-immunity
JOJBGKCH_00373 3.7e-191 S DUF218 domain
JOJBGKCH_00374 0.0 macB_3 V ABC transporter, ATP-binding protein
JOJBGKCH_00375 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
JOJBGKCH_00376 2.8e-100 S ECF transporter, substrate-specific component
JOJBGKCH_00377 2.3e-201 tcsA S ABC transporter substrate-binding protein PnrA-like
JOJBGKCH_00378 6.9e-181 tcsA S ABC transporter substrate-binding protein PnrA-like
JOJBGKCH_00379 1.5e-283 xylG 3.6.3.17 S ABC transporter
JOJBGKCH_00380 2.5e-198 yufP S Belongs to the binding-protein-dependent transport system permease family
JOJBGKCH_00381 4.4e-172 yufQ S Belongs to the binding-protein-dependent transport system permease family
JOJBGKCH_00382 1.1e-68 yeaE S Aldo/keto reductase family
JOJBGKCH_00383 1.8e-77 yeaE S Aldo/keto reductase family
JOJBGKCH_00384 2.1e-134 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
JOJBGKCH_00385 8.5e-119 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
JOJBGKCH_00386 9.3e-124 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
JOJBGKCH_00387 9.4e-72
JOJBGKCH_00388 7e-139 cof S haloacid dehalogenase-like hydrolase
JOJBGKCH_00389 2.2e-230 pbuG S permease
JOJBGKCH_00390 2.1e-76 S ABC-2 family transporter protein
JOJBGKCH_00391 4.7e-60 S ABC-2 family transporter protein
JOJBGKCH_00392 1.7e-93 V ABC transporter, ATP-binding protein
JOJBGKCH_00393 6.4e-196 S Uncharacterised protein family (UPF0236)
JOJBGKCH_00394 3.7e-201 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_00395 3.9e-58
JOJBGKCH_00396 2.5e-119 K helix_turn_helix, mercury resistance
JOJBGKCH_00397 2.6e-86 pbuG S permease
JOJBGKCH_00398 1.8e-128 pbuG S permease
JOJBGKCH_00399 2.5e-40 relB L Addiction module antitoxin, RelB DinJ family
JOJBGKCH_00400 3.4e-15 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
JOJBGKCH_00401 1.8e-48 1.1.1.100 S Enoyl-(Acyl carrier protein) reductase
JOJBGKCH_00402 1.3e-94 K Transcriptional regulator
JOJBGKCH_00403 6.1e-61 K Transcriptional regulator
JOJBGKCH_00404 2e-225 S cog cog1373
JOJBGKCH_00405 9.7e-146 S haloacid dehalogenase-like hydrolase
JOJBGKCH_00406 2.5e-226 pbuG S permease
JOJBGKCH_00407 6.7e-215 L Transposase
JOJBGKCH_00408 1.4e-37 S Putative adhesin
JOJBGKCH_00409 3.7e-261 V ABC transporter transmembrane region
JOJBGKCH_00410 1.1e-139
JOJBGKCH_00411 1.8e-31
JOJBGKCH_00414 8.1e-37
JOJBGKCH_00415 9.2e-57 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
JOJBGKCH_00416 1.8e-44 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
JOJBGKCH_00417 0.0 copA 3.6.3.54 P P-type ATPase
JOJBGKCH_00418 8.2e-114 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
JOJBGKCH_00419 1.2e-105
JOJBGKCH_00420 7e-248 EGP Sugar (and other) transporter
JOJBGKCH_00421 1.2e-18
JOJBGKCH_00422 2.8e-210
JOJBGKCH_00423 3.5e-136 S SLAP domain
JOJBGKCH_00424 1.3e-117 S SLAP domain
JOJBGKCH_00425 1.1e-106 S Bacteriocin helveticin-J
JOJBGKCH_00426 5.7e-44
JOJBGKCH_00427 3.7e-58 ps115 K Helix-turn-helix XRE-family like proteins
JOJBGKCH_00428 3.6e-33 E Zn peptidase
JOJBGKCH_00429 3.9e-287 clcA P chloride
JOJBGKCH_00430 3.1e-275 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JOJBGKCH_00431 1.6e-31
JOJBGKCH_00432 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
JOJBGKCH_00433 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
JOJBGKCH_00434 2.1e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
JOJBGKCH_00435 8.4e-146 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
JOJBGKCH_00436 3.5e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
JOJBGKCH_00437 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
JOJBGKCH_00438 2e-199 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_00439 9.5e-245 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JOJBGKCH_00440 3.1e-185 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
JOJBGKCH_00441 3.7e-174 L Bifunctional protein
JOJBGKCH_00442 2.6e-35 yaaA S S4 domain protein YaaA
JOJBGKCH_00443 3.1e-209 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JOJBGKCH_00444 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JOJBGKCH_00445 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JOJBGKCH_00446 1.6e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
JOJBGKCH_00447 2.7e-75 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
JOJBGKCH_00448 1.2e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JOJBGKCH_00449 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
JOJBGKCH_00450 5.7e-69 rplI J Binds to the 23S rRNA
JOJBGKCH_00451 6.7e-254 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
JOJBGKCH_00452 2.3e-165 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
JOJBGKCH_00453 5.2e-170 degV S DegV family
JOJBGKCH_00454 2.7e-141 L An automated process has identified a potential problem with this gene model
JOJBGKCH_00455 1.9e-132 V ABC transporter transmembrane region
JOJBGKCH_00456 6.7e-167 scrK 2.7.1.2, 2.7.1.4 GK ROK family
JOJBGKCH_00458 1.4e-16
JOJBGKCH_00459 8.9e-235 L Transposase DDE domain
JOJBGKCH_00460 1.6e-227 I Protein of unknown function (DUF2974)
JOJBGKCH_00461 9.2e-119 yhiD S MgtC family
JOJBGKCH_00463 3.9e-131 K Helix-turn-helix XRE-family like proteins
JOJBGKCH_00464 7.4e-74
JOJBGKCH_00465 3.3e-87
JOJBGKCH_00466 3.3e-141 D Ftsk spoiiie family protein
JOJBGKCH_00467 5.1e-145 S Replication initiation factor
JOJBGKCH_00468 3.9e-55
JOJBGKCH_00469 2.3e-26
JOJBGKCH_00470 9.5e-220 L Belongs to the 'phage' integrase family
JOJBGKCH_00472 2.5e-62 yfiL V ABC transporter
JOJBGKCH_00473 2.9e-46 V Transport permease protein
JOJBGKCH_00474 3.4e-09
JOJBGKCH_00475 1.1e-68 sagB C Nitroreductase family
JOJBGKCH_00476 3.3e-55
JOJBGKCH_00477 1.8e-131 sagD S YcaO cyclodehydratase, ATP-ad Mg2+-binding
JOJBGKCH_00479 6.7e-223 L Transposase
JOJBGKCH_00480 3.8e-24 S SLAP domain
JOJBGKCH_00481 4.3e-24 S SLAP domain
JOJBGKCH_00482 6.7e-223 L Transposase
JOJBGKCH_00483 4.8e-183 L DDE superfamily endonuclease
JOJBGKCH_00484 8.8e-29
JOJBGKCH_00487 1.4e-192 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_00488 2e-83 K Helix-turn-helix XRE-family like proteins
JOJBGKCH_00489 2.5e-75 K Helix-turn-helix domain
JOJBGKCH_00490 1.9e-25 S CAAX protease self-immunity
JOJBGKCH_00491 1.4e-22 S CAAX protease self-immunity
JOJBGKCH_00492 7.6e-26 WQ51_00220 K Helix-turn-helix XRE-family like proteins
JOJBGKCH_00494 1.6e-96 ybaT E Amino acid permease
JOJBGKCH_00495 6.5e-07 S LPXTG cell wall anchor motif
JOJBGKCH_00496 2.6e-146 S Putative ABC-transporter type IV
JOJBGKCH_00498 9.6e-28 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
JOJBGKCH_00499 0.0 ftsZ M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
JOJBGKCH_00500 5.2e-117 isp2 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
JOJBGKCH_00501 1.2e-210 oppA E ABC transporter substrate-binding protein
JOJBGKCH_00502 2.7e-109 oppA E ABC transporter substrate-binding protein
JOJBGKCH_00503 6.4e-177 K AI-2E family transporter
JOJBGKCH_00504 2.6e-103 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
JOJBGKCH_00505 4.1e-18
JOJBGKCH_00506 5.2e-248 G Major Facilitator
JOJBGKCH_00507 2.4e-136 XK27_08845 S ABC transporter, ATP-binding protein
JOJBGKCH_00508 5.6e-121 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
JOJBGKCH_00509 1.7e-174 ABC-SBP S ABC transporter
JOJBGKCH_00510 5.6e-132 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
JOJBGKCH_00511 2e-155 P CorA-like Mg2+ transporter protein
JOJBGKCH_00512 1.2e-160 yvgN C Aldo keto reductase
JOJBGKCH_00513 0.0 tetP J elongation factor G
JOJBGKCH_00514 4e-150 3.1.3.102, 3.1.3.104 S haloacid dehalogenase-like hydrolase
JOJBGKCH_00515 7.6e-134 EGP Major facilitator Superfamily
JOJBGKCH_00516 1.4e-192 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JOJBGKCH_00519 1.8e-158 xth 3.1.11.2 L exodeoxyribonuclease III
JOJBGKCH_00520 1.3e-273 E amino acid
JOJBGKCH_00521 0.0 L Helicase C-terminal domain protein
JOJBGKCH_00522 4.8e-205 pbpX1 V Beta-lactamase
JOJBGKCH_00523 5.1e-226 N Uncharacterized conserved protein (DUF2075)
JOJBGKCH_00524 1.4e-69 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
JOJBGKCH_00525 1.2e-85 S COG NOG38524 non supervised orthologous group
JOJBGKCH_00527 4e-36 S Cytochrome B5
JOJBGKCH_00528 1.7e-167 arbZ I Phosphate acyltransferases
JOJBGKCH_00529 8.7e-181 arbY M Glycosyl transferase family 8
JOJBGKCH_00530 1.5e-143 arbY M Glycosyl transferase family 8
JOJBGKCH_00531 1.7e-221 L Transposase
JOJBGKCH_00533 1.5e-155 arbx M Glycosyl transferase family 8
JOJBGKCH_00534 4.2e-149 arbV 2.3.1.51 I Acyl-transferase
JOJBGKCH_00536 4.9e-34
JOJBGKCH_00538 4.8e-131 K response regulator
JOJBGKCH_00539 2.2e-305 vicK 2.7.13.3 T Histidine kinase
JOJBGKCH_00540 3.3e-258 yycH S YycH protein
JOJBGKCH_00541 3.4e-149 yycI S YycH protein
JOJBGKCH_00542 4.1e-147 vicX 3.1.26.11 S domain protein
JOJBGKCH_00543 1.6e-161 htrA 3.4.21.107 O serine protease
JOJBGKCH_00544 1e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
JOJBGKCH_00545 9.9e-197 S Uncharacterised protein family (UPF0236)
JOJBGKCH_00546 8.4e-25 G Peptidase_C39 like family
JOJBGKCH_00547 2.8e-162 M NlpC/P60 family
JOJBGKCH_00548 6.5e-91 G Peptidase_C39 like family
JOJBGKCH_00549 1.8e-175 pepI 3.4.11.5, 3.5.1.101 E Releases the N-terminal proline from various substrates
JOJBGKCH_00550 9.6e-78 P Cobalt transport protein
JOJBGKCH_00551 4.8e-249 cbiO1 S ABC transporter, ATP-binding protein
JOJBGKCH_00552 1.7e-112 L PFAM transposase IS116 IS110 IS902
JOJBGKCH_00553 7.9e-174 K helix_turn_helix, arabinose operon control protein
JOJBGKCH_00554 2.2e-157 htpX O Belongs to the peptidase M48B family
JOJBGKCH_00555 9.7e-95 lemA S LemA family
JOJBGKCH_00556 9.8e-192 ybiR P Citrate transporter
JOJBGKCH_00557 7.8e-70 S Iron-sulphur cluster biosynthesis
JOJBGKCH_00558 4.9e-211 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
JOJBGKCH_00559 3.6e-82 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
JOJBGKCH_00560 1.2e-17
JOJBGKCH_00561 1.1e-07 S Uncharacterised protein family (UPF0236)
JOJBGKCH_00562 6.7e-185 ydaM M Glycosyl transferase
JOJBGKCH_00563 1.8e-177 G Glycosyl hydrolases family 8
JOJBGKCH_00564 1e-119 yfbR S HD containing hydrolase-like enzyme
JOJBGKCH_00565 2.6e-160 L HNH nucleases
JOJBGKCH_00566 2.5e-148 S Protein of unknown function (DUF805)
JOJBGKCH_00567 3.4e-135 glnQ E ABC transporter, ATP-binding protein
JOJBGKCH_00568 1.3e-290 glnP P ABC transporter permease
JOJBGKCH_00569 4e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
JOJBGKCH_00570 5.8e-64 yeaO S Protein of unknown function, DUF488
JOJBGKCH_00571 2.8e-124 terC P Integral membrane protein TerC family
JOJBGKCH_00572 9.2e-92 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
JOJBGKCH_00573 1.4e-192 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_00574 8.5e-133 cobB K SIR2 family
JOJBGKCH_00575 1.4e-160 L PFAM transposase, IS4 family protein
JOJBGKCH_00576 9.3e-86
JOJBGKCH_00577 1.2e-282 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JOJBGKCH_00578 7.7e-182 S Alpha/beta hydrolase of unknown function (DUF915)
JOJBGKCH_00579 3e-147 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JOJBGKCH_00580 4.4e-140 ypuA S Protein of unknown function (DUF1002)
JOJBGKCH_00581 3.7e-156 epsV 2.7.8.12 S glycosyl transferase family 2
JOJBGKCH_00582 7.3e-126 S Alpha/beta hydrolase family
JOJBGKCH_00583 1.4e-140 L An automated process has identified a potential problem with this gene model
JOJBGKCH_00584 5.6e-36
JOJBGKCH_00585 3.3e-183 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JOJBGKCH_00586 8.4e-125 luxT K Bacterial regulatory proteins, tetR family
JOJBGKCH_00587 2.8e-135
JOJBGKCH_00588 1.3e-258 glnPH2 P ABC transporter permease
JOJBGKCH_00589 2.6e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
JOJBGKCH_00590 6.4e-224 S Cysteine-rich secretory protein family
JOJBGKCH_00591 1.2e-205 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
JOJBGKCH_00592 1.4e-112
JOJBGKCH_00593 2.2e-202 yibE S overlaps another CDS with the same product name
JOJBGKCH_00594 4.9e-129 yibF S overlaps another CDS with the same product name
JOJBGKCH_00595 8.7e-145 I alpha/beta hydrolase fold
JOJBGKCH_00596 0.0 G Belongs to the glycosyl hydrolase 31 family
JOJBGKCH_00597 4.1e-217 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
JOJBGKCH_00598 5.4e-13
JOJBGKCH_00599 9.6e-184 L DDE superfamily endonuclease
JOJBGKCH_00600 5.2e-08
JOJBGKCH_00601 3e-89 ntd 2.4.2.6 F Nucleoside
JOJBGKCH_00602 8.6e-87 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JOJBGKCH_00603 7.5e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
JOJBGKCH_00604 8.8e-84 uspA T universal stress protein
JOJBGKCH_00606 1.2e-161 phnD P Phosphonate ABC transporter
JOJBGKCH_00607 3e-139 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
JOJBGKCH_00608 1.4e-120 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
JOJBGKCH_00609 1.3e-148 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
JOJBGKCH_00610 1.4e-81 L COG3385 FOG Transposase and inactivated derivatives
JOJBGKCH_00611 9.6e-184 L DDE superfamily endonuclease
JOJBGKCH_00612 1.7e-174 L COG3385 FOG Transposase and inactivated derivatives
JOJBGKCH_00613 1.6e-105 tag 3.2.2.20 L glycosylase
JOJBGKCH_00614 3.9e-84
JOJBGKCH_00615 1.6e-271 S Calcineurin-like phosphoesterase
JOJBGKCH_00616 0.0 asnB 6.3.5.4 E Asparagine synthase
JOJBGKCH_00617 5.6e-255 yxbA 6.3.1.12 S ATP-grasp enzyme
JOJBGKCH_00618 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
JOJBGKCH_00619 8.7e-141 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JOJBGKCH_00620 6.2e-103 S Iron-sulfur cluster assembly protein
JOJBGKCH_00621 1.5e-230 XK27_04775 S PAS domain
JOJBGKCH_00622 1.4e-210 yttB EGP Major facilitator Superfamily
JOJBGKCH_00623 1.1e-163 L An automated process has identified a potential problem with this gene model
JOJBGKCH_00624 0.0 pepO 3.4.24.71 O Peptidase family M13
JOJBGKCH_00625 0.0 kup P Transport of potassium into the cell
JOJBGKCH_00626 7.3e-74
JOJBGKCH_00627 2.1e-45 S PFAM Archaeal ATPase
JOJBGKCH_00629 3.7e-58 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
JOJBGKCH_00630 5.9e-45
JOJBGKCH_00631 3e-112 L PFAM transposase IS116 IS110 IS902
JOJBGKCH_00633 5.5e-30
JOJBGKCH_00634 4.3e-40 S Protein of unknown function (DUF2922)
JOJBGKCH_00635 8.5e-105 S SLAP domain
JOJBGKCH_00636 6.7e-19 3.6.4.12 S PD-(D/E)XK nuclease family transposase
JOJBGKCH_00638 4.3e-145 3.6.4.12 S PD-(D/E)XK nuclease family transposase
JOJBGKCH_00639 1.1e-25
JOJBGKCH_00640 1.2e-77 K DNA-templated transcription, initiation
JOJBGKCH_00641 5.3e-41
JOJBGKCH_00643 1.2e-132 S SLAP domain
JOJBGKCH_00645 5.4e-215 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
JOJBGKCH_00646 2.5e-179 atl 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
JOJBGKCH_00647 8.8e-177 yjbQ P TrkA C-terminal domain protein
JOJBGKCH_00648 1.9e-113 yjbQ P TrkA C-terminal domain protein
JOJBGKCH_00649 1.7e-106 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
JOJBGKCH_00650 2.1e-161 S Oxidoreductase family, NAD-binding Rossmann fold
JOJBGKCH_00651 2.1e-130
JOJBGKCH_00652 2.1e-116
JOJBGKCH_00653 5e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JOJBGKCH_00654 1.4e-98 G Aldose 1-epimerase
JOJBGKCH_00655 5.2e-201 brpA K Cell envelope-like function transcriptional attenuator common domain protein
JOJBGKCH_00656 1.6e-111 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
JOJBGKCH_00657 0.0 XK27_08315 M Sulfatase
JOJBGKCH_00658 9.7e-233 L COG3547 Transposase and inactivated derivatives
JOJBGKCH_00659 8.4e-265 S Fibronectin type III domain
JOJBGKCH_00660 4.5e-241 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JOJBGKCH_00662 4.6e-257 pepC 3.4.22.40 E aminopeptidase
JOJBGKCH_00663 1.3e-122 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
JOJBGKCH_00664 5e-301 oppA E ABC transporter, substratebinding protein
JOJBGKCH_00665 1.6e-310 oppA E ABC transporter, substratebinding protein
JOJBGKCH_00666 3e-270 L Transposase DDE domain
JOJBGKCH_00667 8.3e-210 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
JOJBGKCH_00668 1.1e-146 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
JOJBGKCH_00669 8.9e-187 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
JOJBGKCH_00670 2.3e-198 oppD P Belongs to the ABC transporter superfamily
JOJBGKCH_00671 1.9e-175 oppF P Belongs to the ABC transporter superfamily
JOJBGKCH_00672 5.7e-163 L An automated process has identified a potential problem with this gene model
JOJBGKCH_00673 5.2e-256 pepC 3.4.22.40 E aminopeptidase
JOJBGKCH_00674 2.9e-67 hsp O Belongs to the small heat shock protein (HSP20) family
JOJBGKCH_00675 7.5e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
JOJBGKCH_00676 7.9e-112
JOJBGKCH_00678 1.2e-111 E Belongs to the SOS response-associated peptidase family
JOJBGKCH_00679 3.7e-193 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
JOJBGKCH_00680 1.8e-89 comEB 3.5.4.12 F MafB19-like deaminase
JOJBGKCH_00681 2e-103 S TPM domain
JOJBGKCH_00682 1.5e-132 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
JOJBGKCH_00683 1e-307 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
JOJBGKCH_00684 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JOJBGKCH_00685 1e-147 tatD L hydrolase, TatD family
JOJBGKCH_00686 1e-99 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JOJBGKCH_00687 3e-151 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
JOJBGKCH_00688 4.5e-39 veg S Biofilm formation stimulator VEG
JOJBGKCH_00689 1.1e-147 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
JOJBGKCH_00690 1.3e-172 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JOJBGKCH_00691 9.9e-197 S Uncharacterised protein family (UPF0236)
JOJBGKCH_00692 5.3e-80
JOJBGKCH_00693 2e-295 S SLAP domain
JOJBGKCH_00694 4.8e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JOJBGKCH_00695 1.6e-171 2.7.1.2 GK ROK family
JOJBGKCH_00696 2.5e-43
JOJBGKCH_00697 9.4e-269 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
JOJBGKCH_00698 6.7e-223 L Transposase
JOJBGKCH_00699 4.5e-68 S Domain of unknown function (DUF1934)
JOJBGKCH_00700 1.8e-47 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
JOJBGKCH_00701 2.7e-310 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
JOJBGKCH_00702 1.4e-245 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JOJBGKCH_00703 2.1e-80 K acetyltransferase
JOJBGKCH_00704 1.3e-47 adk 2.7.4.3 F AAA domain
JOJBGKCH_00705 4.4e-285 pipD E Dipeptidase
JOJBGKCH_00706 1.4e-192 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_00707 3.1e-77 msmR K AraC-like ligand binding domain
JOJBGKCH_00708 1.4e-226 pbuX F xanthine permease
JOJBGKCH_00709 3.1e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
JOJBGKCH_00710 2.4e-43 K Helix-turn-helix
JOJBGKCH_00711 7.8e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
JOJBGKCH_00713 4.9e-99 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
JOJBGKCH_00714 8.7e-117 3.2.1.18 GH33 M Rib/alpha-like repeat
JOJBGKCH_00715 4.5e-185 3.2.1.18 GH33 M Rib/alpha-like repeat
JOJBGKCH_00717 7.8e-78 2.5.1.74 H UbiA prenyltransferase family
JOJBGKCH_00718 1e-95
JOJBGKCH_00719 6.7e-223 L Transposase
JOJBGKCH_00720 1.3e-141 yfeO P Voltage gated chloride channel
JOJBGKCH_00721 1.4e-184 5.3.3.2 C FMN-dependent dehydrogenase
JOJBGKCH_00722 1.4e-51
JOJBGKCH_00723 2.1e-42
JOJBGKCH_00724 6.4e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JOJBGKCH_00725 9.5e-297 ybeC E amino acid
JOJBGKCH_00726 2.6e-157 S Sucrose-6F-phosphate phosphohydrolase
JOJBGKCH_00727 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
JOJBGKCH_00728 2.5e-39 rpmE2 J Ribosomal protein L31
JOJBGKCH_00729 1.3e-262 murF 6.3.2.10, 6.3.2.13 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
JOJBGKCH_00730 4.8e-250 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
JOJBGKCH_00731 1.7e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
JOJBGKCH_00732 1e-215 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JOJBGKCH_00733 3.4e-129 S (CBS) domain
JOJBGKCH_00734 1.5e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
JOJBGKCH_00735 5.1e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
JOJBGKCH_00736 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JOJBGKCH_00737 1.6e-33 yabO J S4 domain protein
JOJBGKCH_00738 6.8e-60 divIC D Septum formation initiator
JOJBGKCH_00739 1.8e-62 yabR J S1 RNA binding domain
JOJBGKCH_00740 1.5e-241 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
JOJBGKCH_00741 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JOJBGKCH_00742 9.7e-166 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
JOJBGKCH_00743 2e-194 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JOJBGKCH_00744 1.7e-298 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
JOJBGKCH_00745 1.2e-226 L COG2963 Transposase and inactivated derivatives
JOJBGKCH_00746 7.2e-228 L COG3547 Transposase and inactivated derivatives
JOJBGKCH_00747 1.4e-83 K FR47-like protein
JOJBGKCH_00748 1.6e-08
JOJBGKCH_00749 1.6e-08
JOJBGKCH_00750 1.6e-08
JOJBGKCH_00752 1.3e-81 yebR 1.8.4.14 T GAF domain-containing protein
JOJBGKCH_00753 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
JOJBGKCH_00754 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JOJBGKCH_00755 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JOJBGKCH_00756 3.6e-120 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
JOJBGKCH_00757 7.8e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
JOJBGKCH_00758 2.7e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
JOJBGKCH_00759 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JOJBGKCH_00760 3.4e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
JOJBGKCH_00761 9e-113 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JOJBGKCH_00762 2.1e-106 rplD J Forms part of the polypeptide exit tunnel
JOJBGKCH_00763 3.1e-47 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
JOJBGKCH_00764 7.3e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JOJBGKCH_00765 1.1e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
JOJBGKCH_00766 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
JOJBGKCH_00767 2.7e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
JOJBGKCH_00768 2.1e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JOJBGKCH_00769 1.3e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
JOJBGKCH_00770 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JOJBGKCH_00771 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
JOJBGKCH_00772 3.4e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
JOJBGKCH_00773 5.5e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
JOJBGKCH_00774 8.9e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JOJBGKCH_00775 3.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JOJBGKCH_00776 3.3e-92 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
JOJBGKCH_00777 1.1e-54 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
JOJBGKCH_00778 4.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
JOJBGKCH_00779 2.3e-24 rpmD J Ribosomal protein L30
JOJBGKCH_00780 2.6e-71 rplO J Binds to the 23S rRNA
JOJBGKCH_00781 1.1e-237 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
JOJBGKCH_00782 3.5e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
JOJBGKCH_00783 8.4e-34 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
JOJBGKCH_00784 7.8e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
JOJBGKCH_00785 3.6e-55 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
JOJBGKCH_00786 3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JOJBGKCH_00787 1.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JOJBGKCH_00788 1.4e-60 rplQ J Ribosomal protein L17
JOJBGKCH_00789 3.7e-154 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JOJBGKCH_00790 4.6e-157 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JOJBGKCH_00791 7.2e-136 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JOJBGKCH_00792 8.4e-145 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
JOJBGKCH_00793 5.9e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
JOJBGKCH_00794 5.1e-66 rpsI J Belongs to the universal ribosomal protein uS9 family
JOJBGKCH_00795 3.6e-183 L Phage integrase family
JOJBGKCH_00796 1.5e-225 L Transposase
JOJBGKCH_00797 2.2e-22
JOJBGKCH_00798 3.3e-140 repB EP Plasmid replication protein
JOJBGKCH_00799 4.5e-79 S helix_turn_helix, Deoxyribose operon repressor
JOJBGKCH_00800 9.9e-197 S Uncharacterised protein family (UPF0236)
JOJBGKCH_00801 4.4e-180 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_00802 9.9e-197 S Uncharacterised protein family (UPF0236)
JOJBGKCH_00803 8.1e-175 ulaG S Beta-lactamase superfamily domain
JOJBGKCH_00804 1.5e-61 cmtB 2.7.1.194, 2.7.1.197, 2.7.1.200, 2.7.1.202 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
JOJBGKCH_00805 1.3e-231 ulaA S PTS system sugar-specific permease component
JOJBGKCH_00806 4.1e-31 sgaB 2.7.1.194 G PTS system, Lactose/Cellobiose specific IIB subunit
JOJBGKCH_00807 2.8e-90 ulaD 4.1.1.85, 4.1.2.43 G Orotidine 5'-phosphate decarboxylase / HUMPS family
JOJBGKCH_00808 7.2e-129 ulaE 5.1.3.22 G Xylose isomerase-like TIM barrel
JOJBGKCH_00809 4.9e-123 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
JOJBGKCH_00810 5.2e-68 L haloacid dehalogenase-like hydrolase
JOJBGKCH_00811 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
JOJBGKCH_00812 1.4e-16 L Transposase
JOJBGKCH_00813 1.9e-12 L Transposase
JOJBGKCH_00814 5.9e-13 K Acetyltransferase (GNAT) domain
JOJBGKCH_00815 1.1e-192 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_00816 1.2e-10
JOJBGKCH_00817 2.8e-65 K LytTr DNA-binding domain
JOJBGKCH_00818 1.2e-49 S Protein of unknown function (DUF3021)
JOJBGKCH_00819 6.3e-105 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
JOJBGKCH_00820 1.9e-118 3.1.3.18, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
JOJBGKCH_00821 6e-132 S membrane transporter protein
JOJBGKCH_00822 3.7e-125 gpmB G Belongs to the phosphoglycerate mutase family
JOJBGKCH_00823 7.3e-161 czcD P cation diffusion facilitator family transporter
JOJBGKCH_00824 1.4e-23
JOJBGKCH_00825 2.6e-126 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JOJBGKCH_00826 5.4e-183 S AAA domain
JOJBGKCH_00827 3.3e-44
JOJBGKCH_00828 4.3e-266 pepC 3.4.22.40 E Peptidase C1-like family
JOJBGKCH_00829 2.7e-51
JOJBGKCH_00830 1.1e-192 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_00831 1.8e-101 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
JOJBGKCH_00832 2.7e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JOJBGKCH_00833 1.9e-291 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JOJBGKCH_00834 3.4e-277 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
JOJBGKCH_00835 2.3e-75 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
JOJBGKCH_00836 6.6e-139 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JOJBGKCH_00837 4.2e-95 sigH K Belongs to the sigma-70 factor family
JOJBGKCH_00838 1.7e-34
JOJBGKCH_00839 8.4e-287 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
JOJBGKCH_00840 2.1e-70 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JOJBGKCH_00841 1.6e-246 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JOJBGKCH_00842 3.6e-24 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
JOJBGKCH_00843 3.1e-101 nusG K Participates in transcription elongation, termination and antitermination
JOJBGKCH_00844 1.2e-68 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
JOJBGKCH_00845 3.2e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
JOJBGKCH_00846 2.8e-157 pstS P Phosphate
JOJBGKCH_00847 4.3e-162 pstC P probably responsible for the translocation of the substrate across the membrane
JOJBGKCH_00848 1e-154 pstA P Phosphate transport system permease protein PstA
JOJBGKCH_00849 5e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
JOJBGKCH_00850 3.9e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
JOJBGKCH_00851 2.2e-117 phoU P Plays a role in the regulation of phosphate uptake
JOJBGKCH_00852 2.8e-90 L An automated process has identified a potential problem with this gene model
JOJBGKCH_00853 1.5e-11 GT2,GT4 M family 8
JOJBGKCH_00854 7e-84 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
JOJBGKCH_00855 1.8e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
JOJBGKCH_00856 5.1e-140 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
JOJBGKCH_00857 1.3e-116 rsmC 2.1.1.172 J Methyltransferase
JOJBGKCH_00858 9e-26
JOJBGKCH_00859 1.4e-81 L COG3385 FOG Transposase and inactivated derivatives
JOJBGKCH_00860 6.2e-183 L DDE superfamily endonuclease
JOJBGKCH_00861 1.7e-174 L COG3385 FOG Transposase and inactivated derivatives
JOJBGKCH_00862 2.7e-88 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
JOJBGKCH_00863 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JOJBGKCH_00864 5.7e-106 2.4.1.58 GT8 M family 8
JOJBGKCH_00865 1.2e-35 M lipopolysaccharide 3-alpha-galactosyltransferase activity
JOJBGKCH_00866 2.8e-41 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
JOJBGKCH_00867 2.4e-107 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JOJBGKCH_00868 1.1e-34 S Protein of unknown function (DUF2508)
JOJBGKCH_00869 7.6e-112 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JOJBGKCH_00870 2.2e-51 yaaQ S Cyclic-di-AMP receptor
JOJBGKCH_00871 3.7e-154 holB 2.7.7.7 L DNA polymerase III
JOJBGKCH_00872 1.8e-59 yabA L Involved in initiation control of chromosome replication
JOJBGKCH_00873 1.5e-155 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JOJBGKCH_00874 8.4e-131 fat 3.1.2.21 I Acyl-ACP thioesterase
JOJBGKCH_00875 2.2e-85 S ECF transporter, substrate-specific component
JOJBGKCH_00876 8.2e-134 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
JOJBGKCH_00877 4.8e-96 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
JOJBGKCH_00878 1.5e-194 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JOJBGKCH_00879 1.3e-51 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
JOJBGKCH_00880 3.2e-170 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
JOJBGKCH_00881 8.1e-286 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
JOJBGKCH_00882 0.0 uup S ABC transporter, ATP-binding protein
JOJBGKCH_00883 5.8e-112 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
JOJBGKCH_00884 6.1e-227 L COG3547 Transposase and inactivated derivatives
JOJBGKCH_00885 1.1e-183 scrR K helix_turn _helix lactose operon repressor
JOJBGKCH_00886 3.7e-295 scrB 3.2.1.26 GH32 G invertase
JOJBGKCH_00887 0.0 scrA 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
JOJBGKCH_00888 2.3e-181 M CHAP domain
JOJBGKCH_00889 3.5e-75
JOJBGKCH_00890 1.4e-41 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
JOJBGKCH_00891 2.6e-294 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
JOJBGKCH_00892 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JOJBGKCH_00893 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
JOJBGKCH_00894 1.7e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
JOJBGKCH_00895 1.5e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
JOJBGKCH_00896 9.6e-41 yajC U Preprotein translocase
JOJBGKCH_00897 9.6e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JOJBGKCH_00898 5.9e-216 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
JOJBGKCH_00899 1.4e-181 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
JOJBGKCH_00900 4.7e-228 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
JOJBGKCH_00901 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JOJBGKCH_00902 2e-42 yrzL S Belongs to the UPF0297 family
JOJBGKCH_00903 6.1e-73 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JOJBGKCH_00904 1.1e-50 yrzB S Belongs to the UPF0473 family
JOJBGKCH_00905 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
JOJBGKCH_00906 3.5e-54 trxA O Belongs to the thioredoxin family
JOJBGKCH_00907 9.7e-59 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
JOJBGKCH_00908 2e-139 L An automated process has identified a potential problem with this gene model
JOJBGKCH_00909 1.1e-71 yslB S Protein of unknown function (DUF2507)
JOJBGKCH_00910 6.6e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
JOJBGKCH_00911 6.2e-111 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
JOJBGKCH_00912 4.4e-40 ropB K Helix-turn-helix domain
JOJBGKCH_00914 6.3e-221 L Transposase
JOJBGKCH_00916 8.7e-19 spaC2 V Lanthionine synthetase C-like protein
JOJBGKCH_00917 3.4e-99
JOJBGKCH_00918 1.4e-133
JOJBGKCH_00919 3.1e-100 V ATPases associated with a variety of cellular activities
JOJBGKCH_00920 1.3e-146 ykuT M mechanosensitive ion channel
JOJBGKCH_00921 9.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
JOJBGKCH_00922 1.3e-36
JOJBGKCH_00923 3.8e-160 L hmm pf00665
JOJBGKCH_00924 5.8e-100 L Helix-turn-helix domain
JOJBGKCH_00925 7e-214 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
JOJBGKCH_00926 3.2e-181 ccpA K catabolite control protein A
JOJBGKCH_00927 2.3e-267 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
JOJBGKCH_00928 4.3e-55
JOJBGKCH_00929 9.8e-274 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
JOJBGKCH_00930 1.7e-105 yutD S Protein of unknown function (DUF1027)
JOJBGKCH_00931 6.9e-144 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
JOJBGKCH_00932 3.7e-100 S Protein of unknown function (DUF1461)
JOJBGKCH_00933 2.6e-115 dedA S SNARE-like domain protein
JOJBGKCH_00934 8e-185 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
JOJBGKCH_00935 1.2e-85 S COG NOG38524 non supervised orthologous group
JOJBGKCH_00937 1.6e-227 L Transposase
JOJBGKCH_00940 1.2e-85 S COG NOG38524 non supervised orthologous group
JOJBGKCH_00942 2.1e-185 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
JOJBGKCH_00943 1.7e-129 manY G PTS system
JOJBGKCH_00944 1e-173 manN G system, mannose fructose sorbose family IID component
JOJBGKCH_00945 1.1e-62 manO S Domain of unknown function (DUF956)
JOJBGKCH_00946 3.3e-158 K Transcriptional regulator
JOJBGKCH_00947 1.3e-85 maa S transferase hexapeptide repeat
JOJBGKCH_00948 6.8e-243 cycA E Amino acid permease
JOJBGKCH_00949 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
JOJBGKCH_00950 3.9e-93 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
JOJBGKCH_00951 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
JOJBGKCH_00952 0.0 mtlR K Mga helix-turn-helix domain
JOJBGKCH_00953 0.0 mtlA 2.7.1.197 G PTS system, Lactose/Cellobiose specific IIB subunit
JOJBGKCH_00954 2.1e-79 mtlF 2.7.1.197 G catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JOJBGKCH_00955 1e-218 mtlD 1.1.1.17 C mannitol-1-phosphate 5-dehydrogenase activity
JOJBGKCH_00956 3.2e-28 4.1.1.44 S Carboxymuconolactone decarboxylase family
JOJBGKCH_00957 1.4e-78 4.1.1.44 S Carboxymuconolactone decarboxylase family
JOJBGKCH_00958 2.1e-32
JOJBGKCH_00959 3.7e-59 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
JOJBGKCH_00960 2.3e-156 K Helix-turn-helix XRE-family like proteins
JOJBGKCH_00961 3.9e-298 V ABC transporter transmembrane region
JOJBGKCH_00962 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
JOJBGKCH_00963 0.0 S TerB-C domain
JOJBGKCH_00964 3.5e-244 P P-loop Domain of unknown function (DUF2791)
JOJBGKCH_00965 0.0 lhr L DEAD DEAH box helicase
JOJBGKCH_00966 1.4e-60
JOJBGKCH_00967 1.6e-227 amtB P ammonium transporter
JOJBGKCH_00968 4.4e-135 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
JOJBGKCH_00970 6.2e-59 psiE S Phosphate-starvation-inducible E
JOJBGKCH_00971 6.5e-113 yncA 2.3.1.79 S Maltose acetyltransferase
JOJBGKCH_00972 2.9e-69 S Iron-sulphur cluster biosynthesis
JOJBGKCH_00974 2.3e-30
JOJBGKCH_00975 2.3e-172 pphA 3.1.3.16 T Calcineurin-like phosphoesterase
JOJBGKCH_00976 6.2e-12
JOJBGKCH_00977 1.8e-125 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JOJBGKCH_00978 2.8e-86 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JOJBGKCH_00979 5.8e-100 L Helix-turn-helix domain
JOJBGKCH_00980 3.8e-160 L hmm pf00665
JOJBGKCH_00981 5.8e-78 M LysM domain protein
JOJBGKCH_00982 3.5e-222 L Transposase
JOJBGKCH_00983 3.9e-159 D nuclear chromosome segregation
JOJBGKCH_00984 1.2e-105 G Phosphoglycerate mutase family
JOJBGKCH_00985 2.6e-89 G Histidine phosphatase superfamily (branch 1)
JOJBGKCH_00986 4.8e-183 L DDE superfamily endonuclease
JOJBGKCH_00987 6.4e-102 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
JOJBGKCH_00988 1.2e-115 glpQ1 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
JOJBGKCH_00990 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
JOJBGKCH_00992 6.5e-210 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
JOJBGKCH_00993 2.7e-185 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
JOJBGKCH_00994 8.1e-120 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
JOJBGKCH_00995 4.4e-144 K SIS domain
JOJBGKCH_00996 6.7e-228 slpX S SLAP domain
JOJBGKCH_00997 3.7e-22 3.6.4.12 S transposase or invertase
JOJBGKCH_00998 7.7e-12
JOJBGKCH_00999 1.1e-240 npr 1.11.1.1 C NADH oxidase
JOJBGKCH_01002 1.9e-300 oppA2 E ABC transporter, substratebinding protein
JOJBGKCH_01003 2.5e-179
JOJBGKCH_01004 1.3e-125 gntR1 K UTRA
JOJBGKCH_01005 5.1e-71 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
JOJBGKCH_01006 3.8e-196 S Uncharacterised protein family (UPF0236)
JOJBGKCH_01007 1.2e-134 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
JOJBGKCH_01008 2.9e-204 csaB M Glycosyl transferases group 1
JOJBGKCH_01009 2.4e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JOJBGKCH_01010 1.2e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
JOJBGKCH_01011 1.3e-202 tnpB L Putative transposase DNA-binding domain
JOJBGKCH_01012 0.0 pacL 3.6.3.8 P P-type ATPase
JOJBGKCH_01013 2e-224 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
JOJBGKCH_01014 3e-257 epsU S Polysaccharide biosynthesis protein
JOJBGKCH_01015 7.7e-134 M Glycosyltransferase sugar-binding region containing DXD motif
JOJBGKCH_01016 4.8e-84 ydcK S Belongs to the SprT family
JOJBGKCH_01018 2.5e-86 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
JOJBGKCH_01019 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
JOJBGKCH_01020 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JOJBGKCH_01021 5.8e-203 camS S sex pheromone
JOJBGKCH_01022 1.5e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JOJBGKCH_01023 5.2e-270 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
JOJBGKCH_01024 4.1e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JOJBGKCH_01025 2.7e-171 yegS 2.7.1.107 G Lipid kinase
JOJBGKCH_01026 7.2e-18
JOJBGKCH_01027 1.5e-65 K transcriptional regulator
JOJBGKCH_01028 1.2e-105 ybhL S Belongs to the BI1 family
JOJBGKCH_01029 4.5e-50
JOJBGKCH_01030 1.3e-230 nhaC C Na H antiporter NhaC
JOJBGKCH_01031 1.6e-199 pbpX V Beta-lactamase
JOJBGKCH_01032 5.8e-255 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JOJBGKCH_01033 1.1e-94 MA20_25245 K Acetyltransferase (GNAT) domain
JOJBGKCH_01038 9.5e-259 emrY EGP Major facilitator Superfamily
JOJBGKCH_01039 2.3e-90 yxdD K Bacterial regulatory proteins, tetR family
JOJBGKCH_01040 1.2e-177 4.2.1.53 S Myosin-crossreactive antigen
JOJBGKCH_01041 5e-164 4.2.1.53 S Myosin-crossreactive antigen
JOJBGKCH_01042 4.8e-228 L COG2963 Transposase and inactivated derivatives
JOJBGKCH_01043 4.7e-227 L COG3547 Transposase and inactivated derivatives
JOJBGKCH_01044 2.1e-34 S Domain of unknown function (DUF4417)
JOJBGKCH_01045 1.3e-19
JOJBGKCH_01046 2.5e-20
JOJBGKCH_01047 1.1e-14 K Helix-turn-helix XRE-family like proteins
JOJBGKCH_01048 3.1e-26 E Zn peptidase
JOJBGKCH_01049 7.6e-234 L Transposase DDE domain
JOJBGKCH_01050 1.1e-192 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_01051 9.9e-197 S Uncharacterised protein family (UPF0236)
JOJBGKCH_01052 5.8e-85 2.3.1.128 K Acetyltransferase (GNAT) domain
JOJBGKCH_01053 7.8e-157 S reductase
JOJBGKCH_01054 2e-29
JOJBGKCH_01055 2.9e-287 K Putative DNA-binding domain
JOJBGKCH_01056 2.9e-238 pyrP F Permease
JOJBGKCH_01057 4.7e-91 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
JOJBGKCH_01058 5.9e-261 emrY EGP Major facilitator Superfamily
JOJBGKCH_01059 1.1e-217 mdtG EGP Major facilitator Superfamily
JOJBGKCH_01060 6.9e-136
JOJBGKCH_01061 1.1e-30
JOJBGKCH_01062 1.7e-209 pepA E M42 glutamyl aminopeptidase
JOJBGKCH_01063 2.2e-311 ybiT S ABC transporter, ATP-binding protein
JOJBGKCH_01064 5.9e-174 S Aldo keto reductase
JOJBGKCH_01065 6.1e-151
JOJBGKCH_01066 9.8e-239 steT E amino acid
JOJBGKCH_01067 8.6e-243 steT E amino acid
JOJBGKCH_01068 4.9e-130 yfeJ 6.3.5.2 F glutamine amidotransferase
JOJBGKCH_01069 1.9e-147 glnH ET ABC transporter
JOJBGKCH_01070 1.4e-80 K Transcriptional regulator, MarR family
JOJBGKCH_01071 1.5e-308 XK27_09600 V ABC transporter, ATP-binding protein
JOJBGKCH_01072 0.0 V ABC transporter transmembrane region
JOJBGKCH_01073 8.4e-102 S ABC-type cobalt transport system, permease component
JOJBGKCH_01074 4.7e-85 G MFS/sugar transport protein
JOJBGKCH_01075 2.3e-151 G MFS/sugar transport protein
JOJBGKCH_01076 4.7e-114 udk 2.7.1.48 F Zeta toxin
JOJBGKCH_01077 1.9e-135 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
JOJBGKCH_01078 3.4e-149 glnH ET ABC transporter substrate-binding protein
JOJBGKCH_01079 9.7e-91 gluC P ABC transporter permease
JOJBGKCH_01080 6.8e-108 glnP P ABC transporter permease
JOJBGKCH_01081 1.1e-164 S Protein of unknown function (DUF2974)
JOJBGKCH_01082 6.1e-227 L COG3547 Transposase and inactivated derivatives
JOJBGKCH_01083 9.9e-197 S Uncharacterised protein family (UPF0236)
JOJBGKCH_01084 1.6e-85
JOJBGKCH_01085 3.3e-222 L Transposase
JOJBGKCH_01086 3e-112 L PFAM transposase IS116 IS110 IS902
JOJBGKCH_01087 2e-210 S Uncharacterized protein conserved in bacteria (DUF2325)
JOJBGKCH_01088 2.4e-37 G Bacterial extracellular solute-binding protein
JOJBGKCH_01089 2.7e-180 G Bacterial extracellular solute-binding protein
JOJBGKCH_01090 1.3e-161 2.7.7.12 C Domain of unknown function (DUF4931)
JOJBGKCH_01091 5.4e-167 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JOJBGKCH_01092 3.4e-126 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
JOJBGKCH_01093 0.0 kup P Transport of potassium into the cell
JOJBGKCH_01094 9.1e-175 rihB 3.2.2.1 F Nucleoside
JOJBGKCH_01095 2.8e-134 ydhQ K UbiC transcription regulator-associated domain protein
JOJBGKCH_01096 1e-153 S hydrolase
JOJBGKCH_01097 2.5e-59 S Enterocin A Immunity
JOJBGKCH_01098 3.1e-136 glcR K DeoR C terminal sensor domain
JOJBGKCH_01099 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
JOJBGKCH_01100 2e-160 rssA S Phospholipase, patatin family
JOJBGKCH_01101 5.4e-147 S hydrolase
JOJBGKCH_01102 0.0 glvC 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
JOJBGKCH_01103 4.1e-147 glvR K Helix-turn-helix domain, rpiR family
JOJBGKCH_01104 6e-80
JOJBGKCH_01105 2.9e-87 pts23A G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
JOJBGKCH_01106 2.1e-39
JOJBGKCH_01107 3.9e-119 C nitroreductase
JOJBGKCH_01108 1.7e-249 yhdP S Transporter associated domain
JOJBGKCH_01109 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
JOJBGKCH_01110 0.0 1.3.5.4 C FAD binding domain
JOJBGKCH_01111 1.1e-87 L PFAM transposase, IS4 family protein
JOJBGKCH_01112 1.2e-49 L PFAM transposase, IS4 family protein
JOJBGKCH_01113 0.0 1.3.5.4 C FAD binding domain
JOJBGKCH_01114 2.8e-230 potE E amino acid
JOJBGKCH_01115 2.2e-196 S Uncharacterised protein family (UPF0236)
JOJBGKCH_01116 1.1e-130 M Glycosyl hydrolases family 25
JOJBGKCH_01117 2.8e-211 yfmL 3.6.4.13 L DEAD DEAH box helicase
JOJBGKCH_01118 1.8e-248 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JOJBGKCH_01120 5.9e-216 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
JOJBGKCH_01121 3.4e-234 L Transposase DDE domain
JOJBGKCH_01122 3.1e-87 gtcA S Teichoic acid glycosylation protein
JOJBGKCH_01123 4.1e-80 fld C Flavodoxin
JOJBGKCH_01124 6.5e-164 map 3.4.11.18 E Methionine Aminopeptidase
JOJBGKCH_01125 8e-163 yihY S Belongs to the UPF0761 family
JOJBGKCH_01126 7.3e-169 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
JOJBGKCH_01127 5.6e-214 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
JOJBGKCH_01128 5.9e-214 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
JOJBGKCH_01129 1.2e-216 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
JOJBGKCH_01130 1e-44
JOJBGKCH_01131 2.9e-27 D Alpha beta
JOJBGKCH_01132 2.2e-119 D Alpha beta
JOJBGKCH_01133 1.2e-263 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JOJBGKCH_01134 3e-145 recX 2.4.1.337 GT4 S Regulatory protein RecX
JOJBGKCH_01135 7.8e-85
JOJBGKCH_01136 1.6e-74
JOJBGKCH_01137 1.2e-141 hlyX S Transporter associated domain
JOJBGKCH_01138 2.1e-304 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
JOJBGKCH_01139 8.7e-44 XK27_09445 S Domain of unknown function (DUF1827)
JOJBGKCH_01140 0.0 clpE O Belongs to the ClpA ClpB family
JOJBGKCH_01141 8.5e-41 ptsH G phosphocarrier protein HPR
JOJBGKCH_01142 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JOJBGKCH_01143 3.9e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
JOJBGKCH_01144 8.5e-139 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
JOJBGKCH_01145 3.3e-122 coiA 3.6.4.12 S Competence protein
JOJBGKCH_01146 4e-13 coiA 3.6.4.12 S Competence protein
JOJBGKCH_01147 4.6e-114 yjbH Q Thioredoxin
JOJBGKCH_01148 5.2e-110 yjbK S CYTH
JOJBGKCH_01149 1.2e-114 yjbM 2.7.6.5 S RelA SpoT domain protein
JOJBGKCH_01150 3.8e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JOJBGKCH_01151 6.4e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
JOJBGKCH_01152 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
JOJBGKCH_01153 4.2e-92 S SNARE associated Golgi protein
JOJBGKCH_01154 3e-112 L PFAM transposase IS116 IS110 IS902
JOJBGKCH_01155 1.8e-200 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
JOJBGKCH_01156 2.2e-66 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
JOJBGKCH_01157 2.6e-214 yubA S AI-2E family transporter
JOJBGKCH_01158 4.2e-106 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
JOJBGKCH_01159 1.7e-69 WQ51_03320 S Protein of unknown function (DUF1149)
JOJBGKCH_01160 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
JOJBGKCH_01161 9e-223 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
JOJBGKCH_01162 1.9e-236 S Peptidase M16
JOJBGKCH_01163 2.3e-133 IQ Enoyl-(Acyl carrier protein) reductase
JOJBGKCH_01164 2.1e-95 ymfM S Helix-turn-helix domain
JOJBGKCH_01165 1.1e-95 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JOJBGKCH_01166 4.2e-195 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
JOJBGKCH_01167 7.4e-220 rny S Endoribonuclease that initiates mRNA decay
JOJBGKCH_01168 1.3e-210 tagO 2.7.8.33, 2.7.8.35 M transferase
JOJBGKCH_01169 5.1e-119 yvyE 3.4.13.9 S YigZ family
JOJBGKCH_01170 4.7e-246 comFA L Helicase C-terminal domain protein
JOJBGKCH_01171 9.4e-132 comFC S Competence protein
JOJBGKCH_01172 1.6e-94 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JOJBGKCH_01173 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
JOJBGKCH_01174 4.6e-188 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
JOJBGKCH_01175 5.1e-17
JOJBGKCH_01176 5.8e-180 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
JOJBGKCH_01177 9.2e-158 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JOJBGKCH_01178 1.1e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
JOJBGKCH_01179 3.9e-181 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
JOJBGKCH_01180 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
JOJBGKCH_01181 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
JOJBGKCH_01182 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
JOJBGKCH_01183 4.1e-90 S Short repeat of unknown function (DUF308)
JOJBGKCH_01184 6.2e-165 rapZ S Displays ATPase and GTPase activities
JOJBGKCH_01185 4e-195 ybhK S Required for morphogenesis under gluconeogenic growth conditions
JOJBGKCH_01186 2.1e-171 whiA K May be required for sporulation
JOJBGKCH_01187 2.3e-99 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
JOJBGKCH_01188 0.0 S SH3-like domain
JOJBGKCH_01189 4.9e-111 ybbL S ABC transporter, ATP-binding protein
JOJBGKCH_01190 2.5e-130 ybbM S Uncharacterised protein family (UPF0014)
JOJBGKCH_01191 1.1e-163 L An automated process has identified a potential problem with this gene model
JOJBGKCH_01192 3.1e-48 S Domain of unknown function (DUF4811)
JOJBGKCH_01193 1.4e-262 lmrB EGP Major facilitator Superfamily
JOJBGKCH_01194 4.2e-77 K MerR HTH family regulatory protein
JOJBGKCH_01195 3.1e-139 S Cysteine-rich secretory protein family
JOJBGKCH_01196 4.6e-274 ycaM E amino acid
JOJBGKCH_01197 2.8e-290
JOJBGKCH_01199 3.3e-189 cggR K Putative sugar-binding domain
JOJBGKCH_01200 6.5e-190 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
JOJBGKCH_01201 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
JOJBGKCH_01202 1.7e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
JOJBGKCH_01203 6e-199 L COG2826 Transposase and inactivated derivatives, IS30 family
JOJBGKCH_01204 1.2e-94
JOJBGKCH_01205 2e-199 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_01206 3.4e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
JOJBGKCH_01207 9.7e-137 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
JOJBGKCH_01208 4.1e-181 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
JOJBGKCH_01209 7e-86 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
JOJBGKCH_01210 4e-98 dnaQ 2.7.7.7 L DNA polymerase III
JOJBGKCH_01211 2e-163 murB 1.3.1.98 M Cell wall formation
JOJBGKCH_01212 1.8e-206 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
JOJBGKCH_01213 1.3e-129 potB P ABC transporter permease
JOJBGKCH_01214 4.8e-127 potC P ABC transporter permease
JOJBGKCH_01215 7.3e-208 potD P ABC transporter
JOJBGKCH_01216 6.4e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JOJBGKCH_01217 2e-172 ybbR S YbbR-like protein
JOJBGKCH_01218 3.1e-256 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JOJBGKCH_01219 1.4e-147 S hydrolase
JOJBGKCH_01220 1.8e-75 K Penicillinase repressor
JOJBGKCH_01221 1.6e-118
JOJBGKCH_01222 7.4e-85 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JOJBGKCH_01223 1.5e-206 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
JOJBGKCH_01224 8.3e-143 licT K CAT RNA binding domain
JOJBGKCH_01225 0.0 bglP 2.7.1.208, 2.7.1.211 G phosphotransferase system
JOJBGKCH_01226 9.1e-302 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
JOJBGKCH_01227 6.9e-178 D Alpha beta
JOJBGKCH_01228 2.8e-304 E Amino acid permease
JOJBGKCH_01230 9.8e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JOJBGKCH_01231 5.1e-108 ylbE GM NAD(P)H-binding
JOJBGKCH_01232 2.9e-93 S VanZ like family
JOJBGKCH_01233 8.9e-133 yebC K Transcriptional regulatory protein
JOJBGKCH_01234 1.7e-179 comGA NU Type II IV secretion system protein
JOJBGKCH_01235 1.7e-171 comGB NU type II secretion system
JOJBGKCH_01236 3.1e-43 comGC U competence protein ComGC
JOJBGKCH_01237 7.4e-71
JOJBGKCH_01238 8.6e-41
JOJBGKCH_01239 9.4e-76 comGF U Putative Competence protein ComGF
JOJBGKCH_01240 1.6e-21
JOJBGKCH_01241 3.5e-188 ytxK 2.1.1.72 L N-6 DNA Methylase
JOJBGKCH_01242 6.3e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JOJBGKCH_01244 1.3e-88 M Protein of unknown function (DUF3737)
JOJBGKCH_01245 9.9e-227 patB 4.4.1.8 E Aminotransferase, class I
JOJBGKCH_01246 7.2e-191 manA 5.3.1.8 G mannose-6-phosphate isomerase
JOJBGKCH_01247 7.7e-67 S SdpI/YhfL protein family
JOJBGKCH_01248 7.5e-132 K Transcriptional regulatory protein, C terminal
JOJBGKCH_01249 7.2e-267 yclK 2.7.13.3, 4.6.1.1 T Histidine kinase
JOJBGKCH_01250 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
JOJBGKCH_01251 3.8e-105 vanZ V VanZ like family
JOJBGKCH_01252 3.2e-253 pgi 5.3.1.9 G Belongs to the GPI family
JOJBGKCH_01253 2.4e-216 EGP Major facilitator Superfamily
JOJBGKCH_01254 3.9e-195 ampC V Beta-lactamase
JOJBGKCH_01257 1.7e-262 murF 6.3.2.10, 6.3.2.13 M Domain of unknown function (DUF1727)
JOJBGKCH_01258 1.3e-113 tdk 2.7.1.21 F thymidine kinase
JOJBGKCH_01259 3.1e-182 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JOJBGKCH_01260 7.3e-155 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
JOJBGKCH_01261 3.7e-190 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
JOJBGKCH_01262 6.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
JOJBGKCH_01263 3.8e-128 atpB C it plays a direct role in the translocation of protons across the membrane
JOJBGKCH_01264 3.5e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JOJBGKCH_01265 3.4e-46 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JOJBGKCH_01266 6.3e-91 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JOJBGKCH_01267 2.5e-283 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
JOJBGKCH_01268 2e-172 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JOJBGKCH_01269 3.3e-240 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JOJBGKCH_01270 9e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
JOJBGKCH_01271 2e-30 ywzB S Protein of unknown function (DUF1146)
JOJBGKCH_01272 1.2e-177 mbl D Cell shape determining protein MreB Mrl
JOJBGKCH_01273 1e-50 yidD S Could be involved in insertion of integral membrane proteins into the membrane
JOJBGKCH_01274 3.3e-33 S Protein of unknown function (DUF2969)
JOJBGKCH_01275 4.7e-216 rodA D Belongs to the SEDS family
JOJBGKCH_01276 1.8e-78 usp6 T universal stress protein
JOJBGKCH_01277 8.4e-39
JOJBGKCH_01278 2.2e-238 rarA L recombination factor protein RarA
JOJBGKCH_01279 1.3e-84 yueI S Protein of unknown function (DUF1694)
JOJBGKCH_01280 1.4e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
JOJBGKCH_01281 2.1e-294 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
JOJBGKCH_01282 3.7e-213 iscS2 2.8.1.7 E Aminotransferase class V
JOJBGKCH_01283 3.7e-224 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JOJBGKCH_01284 1.7e-184 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
JOJBGKCH_01285 3.2e-119 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
JOJBGKCH_01286 5.5e-44 3.6.4.12 S PD-(D/E)XK nuclease family transposase
JOJBGKCH_01287 2.1e-65 2.4.1.83 GT2 S GtrA-like protein
JOJBGKCH_01288 6.2e-171 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
JOJBGKCH_01289 1.5e-94 S Protein of unknown function (DUF3990)
JOJBGKCH_01290 2.9e-44
JOJBGKCH_01292 0.0 3.6.3.8 P P-type ATPase
JOJBGKCH_01293 3.3e-132 S AAA domain, putative AbiEii toxin, Type IV TA system
JOJBGKCH_01294 2.5e-52
JOJBGKCH_01295 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
JOJBGKCH_01296 1.5e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
JOJBGKCH_01297 5.7e-126 S Haloacid dehalogenase-like hydrolase
JOJBGKCH_01298 2.3e-108 radC L DNA repair protein
JOJBGKCH_01299 2.4e-176 mreB D cell shape determining protein MreB
JOJBGKCH_01300 2e-147 mreC M Involved in formation and maintenance of cell shape
JOJBGKCH_01301 2.7e-94 mreD
JOJBGKCH_01303 6.4e-54 S Protein of unknown function (DUF3397)
JOJBGKCH_01304 6.3e-78 mraZ K Belongs to the MraZ family
JOJBGKCH_01305 7.2e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
JOJBGKCH_01306 1.8e-54 ftsL D Cell division protein FtsL
JOJBGKCH_01307 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
JOJBGKCH_01308 1.5e-175 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JOJBGKCH_01309 5e-262 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JOJBGKCH_01310 5.7e-208 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JOJBGKCH_01311 4.5e-152 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
JOJBGKCH_01312 1.3e-246 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
JOJBGKCH_01313 1.7e-206 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JOJBGKCH_01314 7.3e-74 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
JOJBGKCH_01315 1.7e-45 yggT S YGGT family
JOJBGKCH_01316 8.2e-148 ylmH S S4 domain protein
JOJBGKCH_01317 2.8e-74 gpsB D DivIVA domain protein
JOJBGKCH_01318 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JOJBGKCH_01319 3.6e-31 cspA K 'Cold-shock' DNA-binding domain
JOJBGKCH_01320 1.4e-101 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
JOJBGKCH_01321 6.7e-37
JOJBGKCH_01322 5.9e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JOJBGKCH_01323 3.2e-217 iscS 2.8.1.7 E Aminotransferase class V
JOJBGKCH_01324 5.4e-56 XK27_04120 S Putative amino acid metabolism
JOJBGKCH_01325 1.9e-219 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
JOJBGKCH_01326 3.9e-127 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
JOJBGKCH_01327 8.3e-106 S Repeat protein
JOJBGKCH_01328 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
JOJBGKCH_01329 1.6e-294 L Nuclease-related domain
JOJBGKCH_01330 1.2e-182 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
JOJBGKCH_01331 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JOJBGKCH_01332 3.5e-32 ykzG S Belongs to the UPF0356 family
JOJBGKCH_01333 5.2e-56 L Transposase
JOJBGKCH_01334 1.1e-158 L Transposase
JOJBGKCH_01335 4e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
JOJBGKCH_01336 0.0 typA T GTP-binding protein TypA
JOJBGKCH_01337 2.7e-211 ftsW D Belongs to the SEDS family
JOJBGKCH_01338 5.1e-54 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
JOJBGKCH_01339 1.3e-96 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
JOJBGKCH_01340 1.1e-81 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JOJBGKCH_01341 6.9e-187 ylbL T Belongs to the peptidase S16 family
JOJBGKCH_01342 3.1e-79 comEA L Competence protein ComEA
JOJBGKCH_01343 0.0 comEC S Competence protein ComEC
JOJBGKCH_01344 2.6e-175 holA 2.7.7.7 L DNA polymerase III delta subunit
JOJBGKCH_01345 6.7e-35 rpsT J Binds directly to 16S ribosomal RNA
JOJBGKCH_01346 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
JOJBGKCH_01347 3e-310 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JOJBGKCH_01348 5.6e-147
JOJBGKCH_01349 5.7e-163 L An automated process has identified a potential problem with this gene model
JOJBGKCH_01350 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JOJBGKCH_01351 4e-216 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
JOJBGKCH_01352 2e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
JOJBGKCH_01353 1.4e-104 engB D Necessary for normal cell division and for the maintenance of normal septation
JOJBGKCH_01354 7.8e-39 yjeM E Amino Acid
JOJBGKCH_01355 9.5e-170 yjeM E Amino Acid
JOJBGKCH_01356 2.3e-192 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
JOJBGKCH_01357 1.3e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
JOJBGKCH_01358 1.3e-246 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
JOJBGKCH_01359 2.8e-75 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
JOJBGKCH_01360 5.2e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
JOJBGKCH_01361 9.8e-177 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JOJBGKCH_01362 7e-144 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
JOJBGKCH_01363 2.3e-215 aspC 2.6.1.1 E Aminotransferase
JOJBGKCH_01364 2.3e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JOJBGKCH_01365 4.7e-194 pbpX1 V Beta-lactamase
JOJBGKCH_01366 5.7e-111 I Protein of unknown function (DUF2974)
JOJBGKCH_01367 2.1e-188 L COG2826 Transposase and inactivated derivatives, IS30 family
JOJBGKCH_01368 3.1e-181 I Protein of unknown function (DUF2974)
JOJBGKCH_01369 1.1e-192 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_01370 1.8e-38 C FMN_bind
JOJBGKCH_01371 3.9e-82
JOJBGKCH_01372 1.8e-175 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
JOJBGKCH_01373 6.4e-90 alkD L DNA alkylation repair enzyme
JOJBGKCH_01374 6.8e-294 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
JOJBGKCH_01375 1.1e-127 K UTRA domain
JOJBGKCH_01376 1.6e-55 celA1 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
JOJBGKCH_01377 4.3e-59 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
JOJBGKCH_01378 3.2e-11
JOJBGKCH_01379 4.7e-183 L DDE superfamily endonuclease
JOJBGKCH_01380 1.6e-61
JOJBGKCH_01381 1.1e-248 celD G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JOJBGKCH_01382 3.2e-71 S Domain of unknown function (DUF3284)
JOJBGKCH_01383 5.4e-302 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
JOJBGKCH_01384 4.2e-119 gmuR K UTRA
JOJBGKCH_01385 3.7e-223 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JOJBGKCH_01386 5.8e-274 bglA3 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
JOJBGKCH_01387 9.2e-137 ypbG 2.7.1.2 GK ROK family
JOJBGKCH_01388 4.4e-36 C nitroreductase
JOJBGKCH_01389 8e-38 C nitroreductase
JOJBGKCH_01390 3.8e-160 L hmm pf00665
JOJBGKCH_01391 5.8e-100 L Helix-turn-helix domain
JOJBGKCH_01392 7.5e-91 S Domain of unknown function (DUF4767)
JOJBGKCH_01393 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
JOJBGKCH_01394 2.2e-151 yitS S Uncharacterised protein, DegV family COG1307
JOJBGKCH_01395 4.6e-100 3.6.1.27 I Acid phosphatase homologues
JOJBGKCH_01396 3.2e-178 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
JOJBGKCH_01398 1.6e-172 MA20_14895 S Conserved hypothetical protein 698
JOJBGKCH_01399 6.3e-26 XK26_02160 S Pyridoxamine 5'-phosphate oxidase
JOJBGKCH_01400 1.9e-30 XK26_02160 S Pyridoxamine 5'-phosphate oxidase
JOJBGKCH_01401 1e-284 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
JOJBGKCH_01402 1.2e-30 copZ C Heavy-metal-associated domain
JOJBGKCH_01403 1.6e-78 dps P Belongs to the Dps family
JOJBGKCH_01404 1.9e-86 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
JOJBGKCH_01405 2e-129 yobV1 K WYL domain
JOJBGKCH_01406 1.8e-55 S pyridoxamine 5-phosphate
JOJBGKCH_01408 3.8e-84 dps P Belongs to the Dps family
JOJBGKCH_01409 2.6e-222 L Transposase
JOJBGKCH_01410 1.7e-151
JOJBGKCH_01412 1.3e-246 ydaM M Glycosyl transferase
JOJBGKCH_01413 3.5e-205 G Glycosyl hydrolases family 8
JOJBGKCH_01414 1.1e-67 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_01415 2.2e-14 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_01416 5.8e-13 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_01417 9.6e-184 L DDE superfamily endonuclease
JOJBGKCH_01418 2.4e-10 L Psort location Cytoplasmic, score
JOJBGKCH_01419 4e-89 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
JOJBGKCH_01420 2.8e-79 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
JOJBGKCH_01421 2.2e-226 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
JOJBGKCH_01422 8.7e-86 ribE 2.5.1.9, 3.5.4.25, 4.1.99.12 H Riboflavin synthase
JOJBGKCH_01423 3.2e-139 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JOJBGKCH_01425 4.8e-138 L An automated process has identified a potential problem with this gene model
JOJBGKCH_01426 2.8e-48 S Peptidase propeptide and YPEB domain
JOJBGKCH_01427 6.5e-169 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
JOJBGKCH_01428 7.2e-183 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
JOJBGKCH_01429 4.3e-52 K helix_turn_helix gluconate operon transcriptional repressor
JOJBGKCH_01430 2e-155 crtI 1.3.99.23, 5.2.1.13 Q HI0933-like protein
JOJBGKCH_01431 5e-125 C 2Fe-2S iron-sulfur cluster binding domain
JOJBGKCH_01432 2.8e-140 sufC O FeS assembly ATPase SufC
JOJBGKCH_01433 3.5e-174 sufD O FeS assembly protein SufD
JOJBGKCH_01434 5.3e-178 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JOJBGKCH_01435 2.4e-59 nifU C SUF system FeS assembly protein, NifU family
JOJBGKCH_01436 2e-266 sufB O assembly protein SufB
JOJBGKCH_01437 2.4e-45 yitW S Iron-sulfur cluster assembly protein
JOJBGKCH_01438 6.5e-247 mntH P H( )-stimulated, divalent metal cation uptake system
JOJBGKCH_01439 1.4e-192 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_01440 7.7e-10 C Flavodoxin
JOJBGKCH_01441 3.2e-79 S X-Pro dipeptidyl-peptidase (S15 family)
JOJBGKCH_01442 3.3e-45 K Tetracycline repressor, C-terminal all-alpha domain
JOJBGKCH_01444 6.6e-90 K LysR substrate binding domain
JOJBGKCH_01445 8.9e-34 S Domain of unknown function (DUF4440)
JOJBGKCH_01446 1.3e-68 GM NAD(P)H-binding
JOJBGKCH_01447 7e-135 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
JOJBGKCH_01448 1.2e-49 S Belongs to the short-chain dehydrogenases reductases (SDR) family
JOJBGKCH_01449 1.1e-192 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_01450 5.6e-229 brnQ U Component of the transport system for branched-chain amino acids
JOJBGKCH_01451 2.8e-24 S Alpha beta hydrolase
JOJBGKCH_01452 1.4e-273 lsa S ABC transporter
JOJBGKCH_01453 3.5e-107 S Protein of unknown function (DUF1211)
JOJBGKCH_01454 3.5e-222 L Transposase
JOJBGKCH_01455 3.3e-127 L PFAM transposase IS116 IS110 IS902
JOJBGKCH_01456 1.6e-102 ltrA S Bacterial low temperature requirement A protein (LtrA)
JOJBGKCH_01457 5.7e-163 L An automated process has identified a potential problem with this gene model
JOJBGKCH_01458 7.4e-120 3.6.1.55 F NUDIX domain
JOJBGKCH_01459 2.9e-201 L COG2826 Transposase and inactivated derivatives, IS30 family
JOJBGKCH_01460 1.1e-192 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_01461 1.5e-245 brnQ U Component of the transport system for branched-chain amino acids
JOJBGKCH_01462 0.0 L Plasmid pRiA4b ORF-3-like protein
JOJBGKCH_01463 3e-226 L COG3547 Transposase and inactivated derivatives
JOJBGKCH_01464 1.3e-87 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
JOJBGKCH_01465 2.5e-08 S Protein of unknown function (DUF3021)
JOJBGKCH_01466 9e-34 K Bacterial regulatory helix-turn-helix protein, lysR family
JOJBGKCH_01467 3.3e-222 L Transposase
JOJBGKCH_01468 9.5e-34 rmaI K Transcriptional regulator
JOJBGKCH_01469 5.4e-171 lmrB EGP Major facilitator Superfamily
JOJBGKCH_01470 9.9e-197 S Uncharacterised protein family (UPF0236)
JOJBGKCH_01471 1.3e-201 XK27_00915 C Luciferase-like monooxygenase
JOJBGKCH_01472 6.5e-87 K GNAT family
JOJBGKCH_01473 1.4e-124 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
JOJBGKCH_01475 1.5e-36
JOJBGKCH_01476 2.6e-286 P ABC transporter
JOJBGKCH_01477 7.6e-242 V ABC-type multidrug transport system, ATPase and permease components
JOJBGKCH_01478 2.4e-251 yifK E Amino acid permease
JOJBGKCH_01479 3.1e-178 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
JOJBGKCH_01480 1.2e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JOJBGKCH_01481 0.0 aha1 P E1-E2 ATPase
JOJBGKCH_01482 5.8e-177 F DNA/RNA non-specific endonuclease
JOJBGKCH_01483 1e-159 metQ2 P Belongs to the nlpA lipoprotein family
JOJBGKCH_01484 1e-190 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
JOJBGKCH_01485 2e-73 metI P ABC transporter permease
JOJBGKCH_01486 9e-267 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
JOJBGKCH_01487 1.9e-261 frdC 1.3.5.4 C FAD binding domain
JOJBGKCH_01488 3.1e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
JOJBGKCH_01489 4.1e-253 pepC 3.4.22.40 E Peptidase C1-like family
JOJBGKCH_01490 1.3e-133 hxlA 6.2.1.3 H Aldolase/RraA
JOJBGKCH_01491 1e-273 P Sodium:sulfate symporter transmembrane region
JOJBGKCH_01492 1.1e-152 ydjP I Alpha/beta hydrolase family
JOJBGKCH_01493 6.9e-195 citC 6.2.1.22 H Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
JOJBGKCH_01494 1.2e-43 citD C Covalent carrier of the coenzyme of citrate lyase
JOJBGKCH_01495 7.7e-166 citE 4.1.3.25, 4.1.3.34 G Belongs to the HpcH HpaI aldolase family
JOJBGKCH_01496 9.2e-289 citF 2.8.3.10 H Citrate (pro-3S)-lyase alpha chain
JOJBGKCH_01497 7.9e-71 yeaL S Protein of unknown function (DUF441)
JOJBGKCH_01498 1.8e-22
JOJBGKCH_01499 1.2e-144 cbiQ P cobalt transport
JOJBGKCH_01500 0.0 ykoD P ABC transporter, ATP-binding protein
JOJBGKCH_01501 1.5e-95 S UPF0397 protein
JOJBGKCH_01502 5.9e-199 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_01503 2.9e-66 S Domain of unknown function DUF1828
JOJBGKCH_01504 5.5e-09
JOJBGKCH_01505 3.8e-51
JOJBGKCH_01506 2.6e-177 citR K Putative sugar-binding domain
JOJBGKCH_01507 1.9e-250 yjjP S Putative threonine/serine exporter
JOJBGKCH_01509 1.4e-39
JOJBGKCH_01510 2.3e-25 M domain protein
JOJBGKCH_01511 1.1e-84 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JOJBGKCH_01512 2.5e-175 prmA J Ribosomal protein L11 methyltransferase
JOJBGKCH_01513 4.2e-36
JOJBGKCH_01514 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JOJBGKCH_01515 6e-76 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
JOJBGKCH_01516 9.8e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
JOJBGKCH_01517 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
JOJBGKCH_01518 9.8e-222 patA 2.6.1.1 E Aminotransferase
JOJBGKCH_01520 1e-215 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JOJBGKCH_01521 4.8e-34 S reductase
JOJBGKCH_01522 4.4e-39 S reductase
JOJBGKCH_01523 2.7e-32 S reductase
JOJBGKCH_01524 8.4e-148 yxeH S hydrolase
JOJBGKCH_01525 6.8e-181 gyaR 1.1.1.26, 2.7.1.165 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JOJBGKCH_01526 1.1e-243 yfnA E Amino Acid
JOJBGKCH_01527 6.8e-110 dedA 3.1.3.1 S SNARE associated Golgi protein
JOJBGKCH_01528 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
JOJBGKCH_01529 1.7e-243 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
JOJBGKCH_01530 7.7e-293 I Acyltransferase
JOJBGKCH_01531 5.4e-175 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
JOJBGKCH_01532 1.9e-141 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
JOJBGKCH_01533 1.5e-34 yrvD S Lipopolysaccharide assembly protein A domain
JOJBGKCH_01534 1.3e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
JOJBGKCH_01535 1.6e-309 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
JOJBGKCH_01536 2.3e-23 S Protein of unknown function (DUF2929)
JOJBGKCH_01537 0.0 dnaE 2.7.7.7 L DNA polymerase
JOJBGKCH_01538 3.3e-183 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
JOJBGKCH_01539 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
JOJBGKCH_01540 1e-167 cvfB S S1 domain
JOJBGKCH_01541 2.9e-165 xerD D recombinase XerD
JOJBGKCH_01542 6.2e-54 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
JOJBGKCH_01543 7.6e-132 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JOJBGKCH_01544 4.1e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JOJBGKCH_01545 3.1e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
JOJBGKCH_01546 8.7e-114 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
JOJBGKCH_01547 2.7e-18 M Lysin motif
JOJBGKCH_01548 5e-114 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
JOJBGKCH_01549 5.5e-212 rpsA 1.17.7.4 J Ribosomal protein S1
JOJBGKCH_01550 1.9e-247 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
JOJBGKCH_01551 2.3e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
JOJBGKCH_01552 8.7e-229 S Tetratricopeptide repeat protein
JOJBGKCH_01553 1.3e-237 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JOJBGKCH_01554 5.4e-60 S Uncharacterised protein family (UPF0236)
JOJBGKCH_01555 2.5e-11 L Transposase
JOJBGKCH_01556 4.3e-136 S Alpha/beta hydrolase family
JOJBGKCH_01557 1.7e-221 L Transposase
JOJBGKCH_01558 8.6e-82 yxaM EGP Major facilitator Superfamily
JOJBGKCH_01559 3.1e-69 yxaM EGP Major facilitator Superfamily
JOJBGKCH_01560 2.9e-117 fbiB 6.3.2.12, 6.3.2.17, 6.3.2.31, 6.3.2.34 S F420-0:Gamma-glutamyl ligase
JOJBGKCH_01561 1e-79 S AAA domain
JOJBGKCH_01562 3.3e-61 3.6.1.55 F NUDIX domain
JOJBGKCH_01563 1.1e-163 L An automated process has identified a potential problem with this gene model
JOJBGKCH_01564 1.9e-138 2.4.2.3 F Phosphorylase superfamily
JOJBGKCH_01565 9e-144 2.4.2.3 F Phosphorylase superfamily
JOJBGKCH_01566 3.6e-151 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
JOJBGKCH_01567 3.3e-222 L Transposase
JOJBGKCH_01568 9.7e-65 yagE E amino acid
JOJBGKCH_01569 8.4e-128 yagE E Amino acid permease
JOJBGKCH_01570 4.3e-86 3.4.21.96 S SLAP domain
JOJBGKCH_01571 4.6e-160 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
JOJBGKCH_01572 1.1e-225 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
JOJBGKCH_01573 1.2e-107 hlyIII S protein, hemolysin III
JOJBGKCH_01574 5.7e-147 DegV S Uncharacterised protein, DegV family COG1307
JOJBGKCH_01575 7.1e-36 yozE S Belongs to the UPF0346 family
JOJBGKCH_01576 1.1e-66 yjcE P NhaP-type Na H and K H
JOJBGKCH_01577 1.5e-40 yjcE P Sodium proton antiporter
JOJBGKCH_01578 1.9e-94 yjcE P Sodium proton antiporter
JOJBGKCH_01579 2.8e-154 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JOJBGKCH_01580 4.6e-132 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JOJBGKCH_01581 5.8e-152 dprA LU DNA protecting protein DprA
JOJBGKCH_01582 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JOJBGKCH_01583 1.4e-248 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
JOJBGKCH_01584 6.5e-141 xerC D Phage integrase, N-terminal SAM-like domain
JOJBGKCH_01585 1.9e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
JOJBGKCH_01586 8.2e-236 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
JOJBGKCH_01587 4.8e-181 lacX 5.1.3.3 G Aldose 1-epimerase
JOJBGKCH_01588 1.9e-86 C Aldo keto reductase
JOJBGKCH_01589 2.4e-95 sip L Belongs to the 'phage' integrase family
JOJBGKCH_01592 8.3e-17 K Helix-turn-helix XRE-family like proteins
JOJBGKCH_01593 2.5e-10 K Helix-turn-helix XRE-family like proteins
JOJBGKCH_01596 1.8e-08
JOJBGKCH_01597 1.7e-07 K DNA-binding helix-turn-helix protein
JOJBGKCH_01601 5.2e-55 S Protein of unknown function (DUF1351)
JOJBGKCH_01602 3.7e-43 S ERF superfamily
JOJBGKCH_01603 3.9e-24 K Conserved phage C-terminus (Phg_2220_C)
JOJBGKCH_01604 3.3e-19 K Transcriptional regulator
JOJBGKCH_01606 4e-22 radC L DNA repair protein
JOJBGKCH_01613 4.4e-68 S ORF6C domain
JOJBGKCH_01615 6.2e-37 S VRR_NUC
JOJBGKCH_01617 5.8e-09
JOJBGKCH_01622 1.9e-46 2.1.1.72 KL DNA methylase
JOJBGKCH_01623 2e-106 2.1.1.37 L Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
JOJBGKCH_01625 3.2e-190 S Terminase-like family
JOJBGKCH_01626 6.2e-90 S Protein of unknown function (DUF1073)
JOJBGKCH_01627 2.8e-55 S Phage Mu protein F like protein
JOJBGKCH_01628 4.9e-20 S Lysin motif
JOJBGKCH_01629 6e-54 S Uncharacterized protein conserved in bacteria (DUF2213)
JOJBGKCH_01630 3.4e-23
JOJBGKCH_01631 2.6e-37 Z012_11565 S Uncharacterized protein conserved in bacteria (DUF2184)
JOJBGKCH_01632 4.1e-28 S Protein of unknown function (DUF4054)
JOJBGKCH_01633 3.1e-43
JOJBGKCH_01634 1.5e-08
JOJBGKCH_01635 2.1e-27
JOJBGKCH_01636 2.2e-133 Z012_02110 S Protein of unknown function (DUF3383)
JOJBGKCH_01637 1.1e-16
JOJBGKCH_01638 1.1e-11
JOJBGKCH_01639 5.5e-192 M Phage tail tape measure protein TP901
JOJBGKCH_01640 1e-59 M LysM domain
JOJBGKCH_01641 2.7e-46
JOJBGKCH_01642 6.7e-103
JOJBGKCH_01643 3.7e-39
JOJBGKCH_01644 1.4e-30
JOJBGKCH_01645 7.8e-38 Z012_12235 S Baseplate J-like protein
JOJBGKCH_01646 2.3e-58 Z012_12235 S Baseplate J-like protein
JOJBGKCH_01647 2.9e-09
JOJBGKCH_01648 2.3e-34
JOJBGKCH_01653 8.4e-39
JOJBGKCH_01654 2.2e-19 S Phage uncharacterised protein (Phage_XkdX)
JOJBGKCH_01655 1.1e-07
JOJBGKCH_01657 1.7e-16
JOJBGKCH_01658 3.5e-30
JOJBGKCH_01659 1.6e-173 M Glycosyl hydrolases family 25
JOJBGKCH_01663 7.1e-63 M LysM domain protein
JOJBGKCH_01664 5.3e-139 L hmm pf00665
JOJBGKCH_01665 1.4e-98 L Helix-turn-helix domain
JOJBGKCH_01666 3.1e-150 xerD L Phage integrase, N-terminal SAM-like domain
JOJBGKCH_01667 3e-66 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JOJBGKCH_01668 1e-63 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JOJBGKCH_01669 5e-13 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
JOJBGKCH_01670 1.4e-115 mmuP E amino acid
JOJBGKCH_01671 1.2e-271 pepV 3.5.1.18 E dipeptidase PepV
JOJBGKCH_01672 1.6e-93 XK26_02160 C Pyridoxamine 5'-phosphate oxidase
JOJBGKCH_01673 3.2e-283 E Amino acid permease
JOJBGKCH_01674 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
JOJBGKCH_01675 5.1e-245 ynbB 4.4.1.1 P aluminum resistance
JOJBGKCH_01676 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
JOJBGKCH_01677 2.4e-161 L An automated process has identified a potential problem with this gene model
JOJBGKCH_01678 1.3e-161 L PFAM transposase, IS4 family protein
JOJBGKCH_01679 9.9e-82 C Flavodoxin
JOJBGKCH_01680 0.0 uvrA3 L excinuclease ABC, A subunit
JOJBGKCH_01681 1.1e-189 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
JOJBGKCH_01682 2.1e-114 3.6.1.27 I Acid phosphatase homologues
JOJBGKCH_01683 7.4e-205 L COG2826 Transposase and inactivated derivatives, IS30 family
JOJBGKCH_01684 1.9e-80 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
JOJBGKCH_01685 1.4e-115 lacA 2.3.1.79 S Transferase hexapeptide repeat
JOJBGKCH_01686 9.3e-204 pbpX1 V Beta-lactamase
JOJBGKCH_01687 2.8e-98 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
JOJBGKCH_01688 7.5e-95 S ECF-type riboflavin transporter, S component
JOJBGKCH_01689 1.3e-229 S Putative peptidoglycan binding domain
JOJBGKCH_01690 9e-83 K Acetyltransferase (GNAT) domain
JOJBGKCH_01691 2.2e-251 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
JOJBGKCH_01692 1.2e-190 yrvN L AAA C-terminal domain
JOJBGKCH_01693 5.7e-65 spxA_2 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
JOJBGKCH_01694 7.3e-283 treB G phosphotransferase system
JOJBGKCH_01695 8.9e-101 treR K UTRA
JOJBGKCH_01696 1e-288 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
JOJBGKCH_01697 3.3e-127 L PFAM transposase IS116 IS110 IS902
JOJBGKCH_01698 5.7e-18
JOJBGKCH_01699 1.5e-239 G Bacterial extracellular solute-binding protein
JOJBGKCH_01700 1e-60 pdxH S Pyridoxamine 5'-phosphate oxidase
JOJBGKCH_01701 5.5e-236 XK27_01810 S Calcineurin-like phosphoesterase
JOJBGKCH_01703 0.0 S SLAP domain
JOJBGKCH_01704 0.0 hsdR 3.1.21.3 L DEAD/DEAH box helicase
JOJBGKCH_01705 1.2e-164 S AAA domain, putative AbiEii toxin, Type IV TA system
JOJBGKCH_01706 3.4e-42 S RloB-like protein
JOJBGKCH_01707 1.9e-259 hsdM 2.1.1.72 V type I restriction-modification system
JOJBGKCH_01708 1.7e-98 3.1.21.3 V Type I restriction modification DNA specificity domain
JOJBGKCH_01709 1.2e-63 S SIR2-like domain
JOJBGKCH_01710 3.2e-10 S Domain of unknown function DUF87
JOJBGKCH_01711 6.7e-223 L Transposase
JOJBGKCH_01712 2e-75 S cog cog0433
JOJBGKCH_01713 1.9e-110 F DNA/RNA non-specific endonuclease
JOJBGKCH_01714 2.7e-34 S YSIRK type signal peptide
JOJBGKCH_01716 5.5e-53
JOJBGKCH_01717 1.8e-285 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
JOJBGKCH_01718 1.8e-78 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
JOJBGKCH_01719 4.3e-169 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
JOJBGKCH_01720 1e-198 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
JOJBGKCH_01721 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
JOJBGKCH_01722 0.0 FbpA K Fibronectin-binding protein
JOJBGKCH_01723 1.1e-66
JOJBGKCH_01724 5.6e-158 degV S EDD domain protein, DegV family
JOJBGKCH_01725 2.6e-222 L Transposase
JOJBGKCH_01726 1.5e-304 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
JOJBGKCH_01727 5.4e-203 xerS L Belongs to the 'phage' integrase family
JOJBGKCH_01728 3.3e-222 L Transposase
JOJBGKCH_01729 4.1e-67
JOJBGKCH_01730 8e-111 XK27_00160 S Domain of unknown function (DUF5052)
JOJBGKCH_01731 5.8e-211 M Glycosyl hydrolases family 25
JOJBGKCH_01732 3.3e-222 L Transposase
JOJBGKCH_01733 2.1e-39 S Transglycosylase associated protein
JOJBGKCH_01734 6.7e-223 L Transposase
JOJBGKCH_01735 2.7e-123 yoaK S Protein of unknown function (DUF1275)
JOJBGKCH_01736 3.3e-222 L Transposase
JOJBGKCH_01737 4e-57 K Helix-turn-helix domain
JOJBGKCH_01738 2.7e-111 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JOJBGKCH_01739 2.1e-171 ppaC 3.6.1.1 C inorganic pyrophosphatase
JOJBGKCH_01740 5.6e-183 K Transcriptional regulator
JOJBGKCH_01741 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
JOJBGKCH_01742 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
JOJBGKCH_01743 3.5e-109 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
JOJBGKCH_01744 0.0 snf 2.7.11.1 KL domain protein
JOJBGKCH_01745 2e-35
JOJBGKCH_01747 3.8e-104 pncA Q Isochorismatase family
JOJBGKCH_01748 4.9e-118
JOJBGKCH_01751 3.6e-63
JOJBGKCH_01752 1.4e-34
JOJBGKCH_01753 6.7e-223 L Transposase
JOJBGKCH_01754 1.2e-114 rdgB 3.6.1.66, 5.1.1.3 F Ham1 family
JOJBGKCH_01755 3.7e-174 L Bifunctional protein
JOJBGKCH_01756 3.4e-79
JOJBGKCH_01757 1e-242 cpdA S Calcineurin-like phosphoesterase
JOJBGKCH_01758 1.6e-218 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
JOJBGKCH_01759 1.1e-68 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
JOJBGKCH_01760 1e-107 ypsA S Belongs to the UPF0398 family
JOJBGKCH_01761 4.5e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
JOJBGKCH_01762 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
JOJBGKCH_01763 6.1e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JOJBGKCH_01764 1.3e-114 dnaD L DnaD domain protein
JOJBGKCH_01765 1.5e-260 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
JOJBGKCH_01766 9.2e-89 ypmB S Protein conserved in bacteria
JOJBGKCH_01767 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
JOJBGKCH_01768 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
JOJBGKCH_01769 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
JOJBGKCH_01770 4.8e-136 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
JOJBGKCH_01771 1.4e-178 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
JOJBGKCH_01772 2.1e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
JOJBGKCH_01773 6.9e-184 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
JOJBGKCH_01774 1.3e-116 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
JOJBGKCH_01775 8.3e-265 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
JOJBGKCH_01776 9.7e-169
JOJBGKCH_01777 7.5e-143
JOJBGKCH_01778 3.9e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
JOJBGKCH_01779 1.4e-26
JOJBGKCH_01780 1e-94
JOJBGKCH_01781 9.6e-42
JOJBGKCH_01782 5.1e-137
JOJBGKCH_01783 4.5e-141
JOJBGKCH_01784 2.8e-123 skfE V ATPases associated with a variety of cellular activities
JOJBGKCH_01785 1.4e-60 yvoA_1 K Transcriptional regulator, GntR family
JOJBGKCH_01786 1.7e-240 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
JOJBGKCH_01787 1.4e-152 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JOJBGKCH_01788 3.5e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
JOJBGKCH_01789 4.8e-81 mutT 3.6.1.55 F NUDIX domain
JOJBGKCH_01790 1.4e-127 S Peptidase family M23
JOJBGKCH_01791 3.8e-160 L hmm pf00665
JOJBGKCH_01792 5.8e-100 L Helix-turn-helix domain
JOJBGKCH_01793 9.9e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
JOJBGKCH_01794 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
JOJBGKCH_01795 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
JOJBGKCH_01796 4.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
JOJBGKCH_01797 4.4e-135 recO L Involved in DNA repair and RecF pathway recombination
JOJBGKCH_01798 2.1e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JOJBGKCH_01799 2.2e-93 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JOJBGKCH_01800 2.5e-175 phoH T phosphate starvation-inducible protein PhoH
JOJBGKCH_01801 3.5e-71 yqeY S YqeY-like protein
JOJBGKCH_01802 2e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
JOJBGKCH_01803 1.2e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
JOJBGKCH_01804 1.5e-18 S CRISPR-associated protein (Cas_Csn2)
JOJBGKCH_01805 1.4e-192 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_01806 1.4e-220 L Transposase
JOJBGKCH_01807 4e-40 S CRISPR-associated protein (Cas_Csn2)
JOJBGKCH_01808 8.3e-40 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JOJBGKCH_01809 3e-130 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JOJBGKCH_01810 5.1e-181 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
JOJBGKCH_01811 1.1e-163 L An automated process has identified a potential problem with this gene model
JOJBGKCH_01812 1.7e-82 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
JOJBGKCH_01813 1.4e-192 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_01815 1.7e-221 L Transposase
JOJBGKCH_01816 2e-117 S Peptidase family M23
JOJBGKCH_01817 1e-104 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JOJBGKCH_01818 2.2e-69 lysA2 M Glycosyl hydrolases family 25
JOJBGKCH_01822 6.4e-55 E GDSL-like Lipase/Acylhydrolase
JOJBGKCH_01825 1.4e-167 S Phage minor structural protein
JOJBGKCH_01826 1.1e-37 S phage tail
JOJBGKCH_01827 7e-158 M Phage tail tape measure protein TP901
JOJBGKCH_01830 1e-25 S Phage tail tube protein
JOJBGKCH_01831 8.1e-13 S Protein of unknown function (DUF806)
JOJBGKCH_01832 4.1e-23 S Bacteriophage HK97-gp10, putative tail-component
JOJBGKCH_01834 7.3e-17 S Phage gp6-like head-tail connector protein
JOJBGKCH_01835 3.5e-50 S peptidase activity
JOJBGKCH_01836 1.4e-74 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
JOJBGKCH_01837 7e-83 S Phage portal protein
JOJBGKCH_01838 3.3e-127 L PFAM transposase IS116 IS110 IS902
JOJBGKCH_01839 2.7e-16 S Phage portal protein
JOJBGKCH_01841 7.2e-219 S Phage Terminase
JOJBGKCH_01844 2.7e-55 L Phage terminase, small subunit
JOJBGKCH_01845 7.8e-62 L HNH nucleases
JOJBGKCH_01846 1.1e-08
JOJBGKCH_01852 1e-83 ps308 K AntA/AntB antirepressor
JOJBGKCH_01857 1.1e-24 S HNH endonuclease
JOJBGKCH_01858 1.3e-09
JOJBGKCH_01861 1.1e-20 L Psort location Cytoplasmic, score
JOJBGKCH_01869 2.3e-10 K Helix-turn-helix XRE-family like proteins
JOJBGKCH_01870 6.2e-74 3.4.21.88 K Peptidase S24-like
JOJBGKCH_01871 2.5e-30 S Hypothetical protein (DUF2513)
JOJBGKCH_01874 1.6e-180 V Abi-like protein
JOJBGKCH_01875 3.1e-122 L Belongs to the 'phage' integrase family
JOJBGKCH_01876 2.3e-08 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JOJBGKCH_01878 4.6e-160 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
JOJBGKCH_01879 2.5e-118
JOJBGKCH_01880 2.8e-157 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
JOJBGKCH_01881 6.6e-221 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
JOJBGKCH_01882 2.6e-280 thrC 4.2.3.1 E Threonine synthase
JOJBGKCH_01883 8.8e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
JOJBGKCH_01884 9.6e-103 pgm3 5.4.2.11 G Histidine phosphatase superfamily (branch 1)
JOJBGKCH_01885 0.0 L PLD-like domain
JOJBGKCH_01886 4.8e-42 S SnoaL-like domain
JOJBGKCH_01887 5.4e-53 hipB K sequence-specific DNA binding
JOJBGKCH_01888 8e-22 rpiB 5.3.1.6 G Ribose/Galactose Isomerase
JOJBGKCH_01889 3.4e-27
JOJBGKCH_01890 5.7e-222 L Transposase
JOJBGKCH_01891 7.8e-52 V ABC-type multidrug transport system, ATPase and permease components
JOJBGKCH_01892 8.9e-276 V ABC-type multidrug transport system, ATPase and permease components
JOJBGKCH_01893 1.2e-216 L Transposase
JOJBGKCH_01894 1.4e-94
JOJBGKCH_01895 3e-119 VY92_08690 5.3.1.32 G Antibiotic biosynthesis monooxygenase
JOJBGKCH_01896 9e-98
JOJBGKCH_01897 4.9e-108 K LysR substrate binding domain
JOJBGKCH_01898 1e-20
JOJBGKCH_01899 2.3e-215 S Sterol carrier protein domain
JOJBGKCH_01900 9.2e-95 citX 2.4.2.52, 2.7.7.61 HI Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
JOJBGKCH_01901 2e-105 argF 2.1.3.3, 2.7.2.2 E Belongs to the carbamate kinase family
JOJBGKCH_01902 4.3e-66 argF 2.1.3.3, 2.7.2.2 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
JOJBGKCH_01903 8.8e-234 arcA 3.5.3.6 E Arginine
JOJBGKCH_01904 1.2e-136 lysR5 K LysR substrate binding domain
JOJBGKCH_01905 0.0 mgtA 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
JOJBGKCH_01906 1e-48 S Metal binding domain of Ada
JOJBGKCH_01907 2.8e-221 L Transposase
JOJBGKCH_01908 2.3e-43 ybhL S Belongs to the BI1 family
JOJBGKCH_01910 1.2e-210 S Bacterial protein of unknown function (DUF871)
JOJBGKCH_01911 4.7e-227 L COG3547 Transposase and inactivated derivatives
JOJBGKCH_01912 1.2e-94 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JOJBGKCH_01913 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
JOJBGKCH_01914 1.5e-102 srtA 3.4.22.70 M sortase family
JOJBGKCH_01915 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
JOJBGKCH_01916 5.8e-203 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
JOJBGKCH_01917 0.0 dnaK O Heat shock 70 kDa protein
JOJBGKCH_01918 8e-68 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
JOJBGKCH_01919 4.5e-194 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
JOJBGKCH_01920 3.2e-175 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
JOJBGKCH_01921 1.6e-155 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JOJBGKCH_01922 1.1e-59 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JOJBGKCH_01923 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
JOJBGKCH_01924 3.2e-47 rplGA J ribosomal protein
JOJBGKCH_01925 8.8e-47 ylxR K Protein of unknown function (DUF448)
JOJBGKCH_01926 1.4e-196 nusA K Participates in both transcription termination and antitermination
JOJBGKCH_01927 2.5e-83 rimP J Required for maturation of 30S ribosomal subunits
JOJBGKCH_01928 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JOJBGKCH_01929 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
JOJBGKCH_01930 5.7e-196 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
JOJBGKCH_01931 8.4e-140 cdsA 2.7.7.41 I Belongs to the CDS family
JOJBGKCH_01932 5.4e-138 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JOJBGKCH_01933 5.3e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
JOJBGKCH_01934 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
JOJBGKCH_01935 3.1e-184 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JOJBGKCH_01936 3.7e-137 rpsB J Belongs to the universal ribosomal protein uS2 family
JOJBGKCH_01937 3e-195 yabB 2.1.1.223 L Methyltransferase small domain
JOJBGKCH_01938 2.9e-116 plsC 2.3.1.51 I Acyltransferase
JOJBGKCH_01939 4e-220 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
JOJBGKCH_01940 0.0 pepO 3.4.24.71 O Peptidase family M13
JOJBGKCH_01941 0.0 mdlB V ABC transporter
JOJBGKCH_01942 0.0 mdlA V ABC transporter
JOJBGKCH_01943 5.5e-30 yneF S Uncharacterised protein family (UPF0154)
JOJBGKCH_01944 3e-38 ynzC S UPF0291 protein
JOJBGKCH_01945 2e-112 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JOJBGKCH_01946 1.4e-20 E GDSL-like Lipase/Acylhydrolase family
JOJBGKCH_01947 7.7e-204 L Putative transposase DNA-binding domain
JOJBGKCH_01948 9.5e-112 L Resolvase, N-terminal
JOJBGKCH_01949 1.3e-114 E GDSL-like Lipase/Acylhydrolase family
JOJBGKCH_01950 2.1e-120 ung2 3.2.2.27 L Uracil-DNA glycosylase
JOJBGKCH_01951 6.7e-212 S SLAP domain
JOJBGKCH_01952 1.1e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
JOJBGKCH_01953 5e-136 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
JOJBGKCH_01954 1.7e-93 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JOJBGKCH_01955 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
JOJBGKCH_01956 7.6e-229 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JOJBGKCH_01957 6e-55 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
JOJBGKCH_01958 4.1e-259 yfnA E amino acid
JOJBGKCH_01959 5.8e-100 L Helix-turn-helix domain
JOJBGKCH_01960 1.3e-160 L hmm pf00665
JOJBGKCH_01961 0.0 V FtsX-like permease family
JOJBGKCH_01962 4.1e-133 cysA V ABC transporter, ATP-binding protein
JOJBGKCH_01963 3.4e-23
JOJBGKCH_01965 2.5e-288 pipD E Dipeptidase
JOJBGKCH_01966 8.3e-163 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
JOJBGKCH_01967 0.0 smc D Required for chromosome condensation and partitioning
JOJBGKCH_01968 5.5e-124 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
JOJBGKCH_01969 3e-307 oppA E ABC transporter substrate-binding protein
JOJBGKCH_01970 2.4e-15 oppA E ABC transporter substrate-binding protein
JOJBGKCH_01971 1.8e-116 oppA E ABC transporter substrate-binding protein
JOJBGKCH_01972 7.4e-120 oppA E ABC transporter substrate-binding protein
JOJBGKCH_01973 1.7e-128 oppC P Binding-protein-dependent transport system inner membrane component
JOJBGKCH_01974 5.7e-172 oppB P ABC transporter permease
JOJBGKCH_01975 1.9e-170 oppF P Belongs to the ABC transporter superfamily
JOJBGKCH_01976 9.6e-194 oppD P Belongs to the ABC transporter superfamily
JOJBGKCH_01977 9.8e-36 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
JOJBGKCH_01978 3.7e-182 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
JOJBGKCH_01979 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JOJBGKCH_01980 2e-305 yloV S DAK2 domain fusion protein YloV
JOJBGKCH_01981 4e-57 asp S Asp23 family, cell envelope-related function
JOJBGKCH_01982 1.4e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
JOJBGKCH_01983 1.1e-30
JOJBGKCH_01984 2.4e-124 thiN 2.7.6.2 H thiamine pyrophosphokinase
JOJBGKCH_01985 1.1e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
JOJBGKCH_01986 4.1e-164 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
JOJBGKCH_01987 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
JOJBGKCH_01988 1.3e-139 stp 3.1.3.16 T phosphatase
JOJBGKCH_01989 1.6e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JOJBGKCH_01990 1.6e-171 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JOJBGKCH_01991 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JOJBGKCH_01992 1.1e-33 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
JOJBGKCH_01993 2.1e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
JOJBGKCH_01994 1.1e-77 6.3.3.2 S ASCH
JOJBGKCH_01995 8.8e-293 recN L May be involved in recombinational repair of damaged DNA
JOJBGKCH_01996 2.2e-148 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
JOJBGKCH_01997 2.4e-153 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
JOJBGKCH_01998 1.1e-34 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
JOJBGKCH_01999 7.6e-186 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
JOJBGKCH_02000 2.2e-143 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
JOJBGKCH_02001 2.1e-64 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JOJBGKCH_02002 3.4e-71 yqhY S Asp23 family, cell envelope-related function
JOJBGKCH_02003 4.9e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JOJBGKCH_02004 1e-196 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
JOJBGKCH_02005 7.8e-48 rpmA J Belongs to the bacterial ribosomal protein bL27 family
JOJBGKCH_02006 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
JOJBGKCH_02007 3.7e-151 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
JOJBGKCH_02008 7.8e-255 S Uncharacterized protein conserved in bacteria (DUF2325)
JOJBGKCH_02009 3.3e-303 L Transposase
JOJBGKCH_02012 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
JOJBGKCH_02013 2.7e-300 S Predicted membrane protein (DUF2207)
JOJBGKCH_02014 3.1e-156 cinI S Serine hydrolase (FSH1)
JOJBGKCH_02015 1.5e-204 M Glycosyl hydrolases family 25
JOJBGKCH_02017 2.9e-178 I Carboxylesterase family
JOJBGKCH_02018 1.5e-64 arsC 1.20.4.1 P Belongs to the ArsC family
JOJBGKCH_02019 4.1e-276 V ABC-type multidrug transport system, ATPase and permease components
JOJBGKCH_02020 2e-291 V ABC-type multidrug transport system, ATPase and permease components
JOJBGKCH_02021 4e-113 S haloacid dehalogenase-like hydrolase
JOJBGKCH_02022 2.6e-52
JOJBGKCH_02023 1.9e-37
JOJBGKCH_02024 2.3e-65 S Alpha beta hydrolase
JOJBGKCH_02025 1.1e-36 S Alpha beta hydrolase
JOJBGKCH_02026 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
JOJBGKCH_02027 2.8e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
JOJBGKCH_02028 7.1e-46
JOJBGKCH_02029 4e-148 glcU U sugar transport
JOJBGKCH_02030 2.1e-248 lctP C L-lactate permease
JOJBGKCH_02031 1.1e-192 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_02032 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
JOJBGKCH_02033 2.4e-211 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
JOJBGKCH_02034 4e-245 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
JOJBGKCH_02035 3.6e-182 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
JOJBGKCH_02036 4.2e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
JOJBGKCH_02037 2.4e-167 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
JOJBGKCH_02038 3.5e-126 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
JOJBGKCH_02039 1.9e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JOJBGKCH_02040 1.5e-102 GM NmrA-like family
JOJBGKCH_02041 3.4e-15 K FCD
JOJBGKCH_02042 4.7e-26 K FCD
JOJBGKCH_02043 1.6e-60 clcA P chloride
JOJBGKCH_02044 8.6e-119 clcA P chloride
JOJBGKCH_02045 6.5e-104 L PFAM Integrase catalytic
JOJBGKCH_02046 4e-56 L Transposase
JOJBGKCH_02047 8.2e-154 L Transposase
JOJBGKCH_02048 2.2e-102 L Integrase
JOJBGKCH_02049 8e-69 T Toxin-antitoxin system, toxin component, MazF family
JOJBGKCH_02050 1.3e-30
JOJBGKCH_02051 8.1e-43 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_02052 6.9e-133 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_02053 2.8e-33 scrR K Periplasmic binding protein domain
JOJBGKCH_02054 2e-37 scrR K Periplasmic binding protein domain
JOJBGKCH_02055 0.0 pulA 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
JOJBGKCH_02056 4.1e-86 L Transposase
JOJBGKCH_02057 1.9e-121 L Transposase
JOJBGKCH_02058 2.7e-285 lsa S ABC transporter
JOJBGKCH_02059 1.5e-43
JOJBGKCH_02060 3.4e-123 sdaAB 4.3.1.17 E Serine dehydratase beta chain
JOJBGKCH_02061 5.5e-122 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
JOJBGKCH_02062 3.3e-52 S Iron-sulfur cluster assembly protein
JOJBGKCH_02063 5.3e-163 L Transposase
JOJBGKCH_02064 1.2e-94 L Transposase
JOJBGKCH_02065 9.7e-136 dapE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
JOJBGKCH_02066 5.4e-242 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
JOJBGKCH_02067 4.4e-222 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JOJBGKCH_02068 3.2e-278 yjeM E Amino Acid
JOJBGKCH_02069 4.5e-49 S Fic/DOC family
JOJBGKCH_02070 2.8e-08 S Fic/DOC family
JOJBGKCH_02071 3.1e-278
JOJBGKCH_02072 3.2e-77
JOJBGKCH_02073 2.3e-87 S Protein of unknown function (DUF805)
JOJBGKCH_02074 5.6e-68 O OsmC-like protein
JOJBGKCH_02075 6.7e-207 EGP Major facilitator Superfamily
JOJBGKCH_02076 2.5e-215 sptS 2.7.13.3 T Histidine kinase
JOJBGKCH_02077 1.3e-65 K response regulator
JOJBGKCH_02078 6e-27 K response regulator
JOJBGKCH_02079 7.5e-109 2.7.6.5 T Region found in RelA / SpoT proteins
JOJBGKCH_02080 6.2e-271 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
JOJBGKCH_02081 0.0 rafA 3.2.1.22 G alpha-galactosidase
JOJBGKCH_02082 2.8e-210 msmX P Belongs to the ABC transporter superfamily
JOJBGKCH_02083 2e-152 msmG P Binding-protein-dependent transport system inner membrane component
JOJBGKCH_02084 6.7e-223 L Transposase
JOJBGKCH_02085 4.8e-157 msmF P Binding-protein-dependent transport system inner membrane component
JOJBGKCH_02086 2.3e-237 msmE G Bacterial extracellular solute-binding protein
JOJBGKCH_02087 1.6e-158 scrR K Periplasmic binding protein domain
JOJBGKCH_02088 5.5e-36
JOJBGKCH_02089 2.2e-198 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
JOJBGKCH_02091 4.4e-222 L Transposase
JOJBGKCH_02092 2e-288 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
JOJBGKCH_02093 2.1e-221 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JOJBGKCH_02094 0.0 lacZ 3.2.1.23 G -beta-galactosidase
JOJBGKCH_02095 0.0 lacS G Transporter
JOJBGKCH_02096 3.2e-165 lacR K Transcriptional regulator
JOJBGKCH_02097 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
JOJBGKCH_02098 4.6e-145 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
JOJBGKCH_02099 4.5e-188 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
JOJBGKCH_02100 6.4e-162 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
JOJBGKCH_02101 2e-106 K Transcriptional regulator, AbiEi antitoxin
JOJBGKCH_02102 1.2e-188 K Periplasmic binding protein-like domain
JOJBGKCH_02103 1e-203 L COG2963 Transposase and inactivated derivatives
JOJBGKCH_02104 1.3e-226 L Transposase
JOJBGKCH_02105 4.8e-196 fhaB 4.3.1.7 UW LPXTG-motif cell wall anchor domain protein
JOJBGKCH_02106 4.4e-131 infB M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
JOJBGKCH_02107 2.3e-101 L An automated process has identified a potential problem with this gene model
JOJBGKCH_02108 4.6e-25 dnaQ 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JOJBGKCH_02109 4e-60 L Resolvase, N terminal domain
JOJBGKCH_02110 1.5e-226 L COG2963 Transposase and inactivated derivatives
JOJBGKCH_02111 3.3e-222 L Transposase
JOJBGKCH_02112 2e-233 L COG3547 Transposase and inactivated derivatives
JOJBGKCH_02114 2.2e-102
JOJBGKCH_02115 2.2e-36 L PFAM transposase, IS4 family protein
JOJBGKCH_02116 3.7e-127 L PFAM transposase, IS4 family protein
JOJBGKCH_02117 1.3e-149 oppA E ABC transporter substrate-binding protein
JOJBGKCH_02118 2.2e-54 oppA E ABC transporter substrate-binding protein
JOJBGKCH_02119 2e-139 L An automated process has identified a potential problem with this gene model
JOJBGKCH_02120 1.5e-36 oppA E ABC transporter substrate-binding protein
JOJBGKCH_02122 1.4e-31 O OsmC-like protein
JOJBGKCH_02123 3.7e-174 L Bifunctional protein
JOJBGKCH_02124 1.9e-200 L Transposase
JOJBGKCH_02125 1.3e-45 coaA 2.7.1.33 F Pantothenic acid kinase
JOJBGKCH_02127 3.2e-75 S ECF transporter, substrate-specific component
JOJBGKCH_02128 1.5e-54 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JOJBGKCH_02129 3.7e-144 gltC_1 3.1.3.48 K LysR substrate binding domain
JOJBGKCH_02130 1.1e-149 2.8.3.1 I Coenzyme A transferase
JOJBGKCH_02131 1.6e-82 2.8.3.1 I Coenzyme A transferase
JOJBGKCH_02132 9.3e-151 fabK 1.3.1.9 S Nitronate monooxygenase
JOJBGKCH_02133 6.1e-111 crt 4.2.1.17 I Enoyl-CoA hydratase/isomerase
JOJBGKCH_02134 3.5e-108 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
JOJBGKCH_02135 1.4e-107 yisY 1.11.1.10 S Alpha/beta hydrolase family
JOJBGKCH_02136 2.8e-125 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
JOJBGKCH_02137 7.7e-110 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
JOJBGKCH_02138 5.7e-24 axe1 3.1.1.41 Q Acetyl xylan esterase (AXE1)
JOJBGKCH_02139 1.3e-67 axe1 3.1.1.41 Q Acetyl xylan esterase (AXE1)
JOJBGKCH_02140 1e-220 nanT E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JOJBGKCH_02141 2.1e-120 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
JOJBGKCH_02142 3.1e-56 G Xylose isomerase domain protein TIM barrel
JOJBGKCH_02143 8.4e-90 nanK GK ROK family
JOJBGKCH_02144 2.6e-123 nanA 4.1.3.3, 4.3.3.7 EM Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate
JOJBGKCH_02145 3.7e-66 K Helix-turn-helix domain, rpiR family
JOJBGKCH_02146 2.7e-262 E ABC transporter, substratebinding protein
JOJBGKCH_02148 1.4e-155 S interspecies interaction between organisms
JOJBGKCH_02149 2.1e-34
JOJBGKCH_02151 1.2e-31 S protein encoded in hypervariable junctions of pilus gene clusters
JOJBGKCH_02152 1.4e-13 hicA S HicA toxin of bacterial toxin-antitoxin,
JOJBGKCH_02153 3.1e-144
JOJBGKCH_02154 1.5e-169
JOJBGKCH_02155 2e-263 glnA 6.3.1.2 E glutamine synthetase
JOJBGKCH_02156 7.6e-225 ynbB 4.4.1.1 P aluminum resistance
JOJBGKCH_02157 1.9e-167 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JOJBGKCH_02158 1.5e-65 yqhL P Rhodanese-like protein
JOJBGKCH_02159 9.7e-36 yqgQ S Bacterial protein of unknown function (DUF910)
JOJBGKCH_02160 3.1e-119 gluP 3.4.21.105 S Rhomboid family
JOJBGKCH_02161 2.4e-104 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JOJBGKCH_02162 1.2e-20 rpmG J Belongs to the bacterial ribosomal protein bL33 family
JOJBGKCH_02163 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
JOJBGKCH_02164 0.0 S membrane
JOJBGKCH_02165 5.2e-170 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
JOJBGKCH_02166 1.3e-38 S RelB antitoxin
JOJBGKCH_02167 3.4e-51 S Bacterial toxin of type II toxin-antitoxin system, YafQ
JOJBGKCH_02168 6.7e-44 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
JOJBGKCH_02169 6.7e-139 fhuC 3.6.3.34 HP abc transporter atp-binding protein
JOJBGKCH_02170 9.5e-148 isdF U Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JOJBGKCH_02171 8.7e-159 isdE P Periplasmic binding protein
JOJBGKCH_02172 6.3e-123 M Iron Transport-associated domain
JOJBGKCH_02173 3e-09 isdH M Iron Transport-associated domain
JOJBGKCH_02174 8.4e-89
JOJBGKCH_02175 2.6e-222 L Transposase
JOJBGKCH_02176 2.2e-113 S SLAP domain
JOJBGKCH_02177 2.6e-51 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
JOJBGKCH_02178 5.7e-46 S An automated process has identified a potential problem with this gene model
JOJBGKCH_02179 3e-137 S Protein of unknown function (DUF3100)
JOJBGKCH_02180 2.7e-246 3.5.1.47 S Peptidase dimerisation domain
JOJBGKCH_02181 4e-231 Q Imidazolonepropionase and related amidohydrolases
JOJBGKCH_02182 0.0 oppA E ABC transporter
JOJBGKCH_02183 1.2e-151 S Sucrose-6F-phosphate phosphohydrolase
JOJBGKCH_02184 0.0 mco Q Multicopper oxidase
JOJBGKCH_02185 1.9e-25
JOJBGKCH_02186 3.8e-136 metQ1 P Belongs to the nlpA lipoprotein family
JOJBGKCH_02187 3.7e-168 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
JOJBGKCH_02188 4.9e-63 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
JOJBGKCH_02189 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
JOJBGKCH_02190 7.1e-200 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JOJBGKCH_02191 6.2e-157 cjaA ET ABC transporter substrate-binding protein
JOJBGKCH_02192 3.3e-127 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
JOJBGKCH_02193 5.3e-116 P ABC transporter permease
JOJBGKCH_02194 2.7e-107 papP P ABC transporter, permease protein
JOJBGKCH_02196 4.5e-58 yodB K Transcriptional regulator, HxlR family
JOJBGKCH_02197 8.5e-134 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JOJBGKCH_02198 2.4e-43 acyP 3.6.1.7 C Belongs to the acylphosphatase family
JOJBGKCH_02199 2.2e-163 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
JOJBGKCH_02200 1.3e-82 S Aminoacyl-tRNA editing domain
JOJBGKCH_02201 6.1e-224 S SLAP domain
JOJBGKCH_02202 9.2e-100 S CAAX protease self-immunity
JOJBGKCH_02203 1e-12
JOJBGKCH_02204 1.3e-277 arlS 2.7.13.3 T Histidine kinase
JOJBGKCH_02205 1.2e-126 K response regulator
JOJBGKCH_02206 4.7e-97 yceD S Uncharacterized ACR, COG1399
JOJBGKCH_02207 4.6e-216 ylbM S Belongs to the UPF0348 family
JOJBGKCH_02208 5.3e-59 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
JOJBGKCH_02209 4.3e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
JOJBGKCH_02210 4.4e-123 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JOJBGKCH_02211 4.4e-200 yqeH S Ribosome biogenesis GTPase YqeH
JOJBGKCH_02212 4.2e-84 yqeG S HAD phosphatase, family IIIA
JOJBGKCH_02213 8.6e-199 tnpB L Putative transposase DNA-binding domain
JOJBGKCH_02214 1.1e-152 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
JOJBGKCH_02215 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JOJBGKCH_02216 8.1e-28 rpmI J Belongs to the bacterial ribosomal protein bL35 family
JOJBGKCH_02217 3.2e-72 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
JOJBGKCH_02218 4e-98 rihB 3.2.2.1 F Nucleoside
JOJBGKCH_02219 3.7e-101 potB E Binding-protein-dependent transport system inner membrane component
JOJBGKCH_02220 6.7e-223 L Transposase
JOJBGKCH_02221 2.2e-108 potC3 E Binding-protein-dependent transport system inner membrane component
JOJBGKCH_02222 1.6e-135 potA11 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
JOJBGKCH_02223 3e-145 potD2 P ABC transporter
JOJBGKCH_02224 4.9e-251 ade 3.5.4.2 F Adenine deaminase C-terminal domain
JOJBGKCH_02226 5.8e-73 S domain protein
JOJBGKCH_02227 9.9e-197 S Uncharacterised protein family (UPF0236)
JOJBGKCH_02228 3.9e-23 S domain protein
JOJBGKCH_02229 1.7e-168 V ABC transporter
JOJBGKCH_02230 7.7e-39 S Protein of unknown function (DUF3021)
JOJBGKCH_02231 4.2e-53 K LytTr DNA-binding domain
JOJBGKCH_02234 3e-107 L Transposase
JOJBGKCH_02235 1.3e-96 L Transposase
JOJBGKCH_02236 1.5e-180 S Domain of unknown function (DUF389)
JOJBGKCH_02237 2e-199 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_02238 2.6e-222 L Transposase
JOJBGKCH_02239 1.1e-238 XK27_00500 L the current gene model (or a revised gene model) may contain a
JOJBGKCH_02240 3.3e-222 L Transposase
JOJBGKCH_02241 0.0 XK27_00500 L the current gene model (or a revised gene model) may contain a
JOJBGKCH_02247 3.5e-222 L Transposase
JOJBGKCH_02250 1.1e-205 U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
JOJBGKCH_02251 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
JOJBGKCH_02256 7e-77 CBM50 M NlpC P60 family protein
JOJBGKCH_02263 2.5e-46 xerD L Phage integrase, N-terminal SAM-like domain
JOJBGKCH_02264 6.5e-79 traI 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JOJBGKCH_02276 5.7e-163 L An automated process has identified a potential problem with this gene model
JOJBGKCH_02277 2e-129 infB M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
JOJBGKCH_02278 2.6e-163 L An automated process has identified a potential problem with this gene model
JOJBGKCH_02280 5.1e-33 K Helix-turn-helix XRE-family like proteins
JOJBGKCH_02281 1.4e-33 S Phage derived protein Gp49-like (DUF891)
JOJBGKCH_02284 6.7e-223 L Transposase
JOJBGKCH_02289 2.7e-08 S RelB antitoxin
JOJBGKCH_02290 1.5e-109 4.1.2.17 G Class II Aldolase and Adducin N-terminal domain
JOJBGKCH_02292 1.8e-195 pts36C G iic component
JOJBGKCH_02293 7.9e-09 sgcB 2.7.1.200 G PTS system, Lactose/Cellobiose specific IIB subunit
JOJBGKCH_02294 1.4e-51 pts36A 2.7.1.200, 2.7.1.202 G phosphoenolpyruvate-dependent sugar phosphotransferase system
JOJBGKCH_02295 9.6e-52 K DeoR C terminal sensor domain
JOJBGKCH_02296 6.7e-80 lacC 2.7.1.11, 2.7.1.144, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
JOJBGKCH_02297 2.9e-55 yxeH S hydrolase
JOJBGKCH_02299 1e-20
JOJBGKCH_02300 5.7e-163 L An automated process has identified a potential problem with this gene model
JOJBGKCH_02304 4.3e-27 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
JOJBGKCH_02306 1.8e-223 L Transposase
JOJBGKCH_02309 2.4e-224
JOJBGKCH_02311 2.5e-44 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
JOJBGKCH_02313 2.3e-101 endA F DNA RNA non-specific endonuclease
JOJBGKCH_02319 1.4e-108 lepB 3.4.21.89 U Belongs to the peptidase S26 family
JOJBGKCH_02322 1.1e-115 L Resolvase, N-terminal
JOJBGKCH_02323 1.4e-245 L Putative transposase DNA-binding domain
JOJBGKCH_02324 5.5e-79
JOJBGKCH_02326 0.0 S regulation of response to stimulus
JOJBGKCH_02328 1.3e-181 M CHAP domain
JOJBGKCH_02334 6.6e-12 L Initiator Replication protein
JOJBGKCH_02335 1.5e-90 ypuA S Protein of unknown function (DUF1002)
JOJBGKCH_02336 2.9e-91 L Initiator Replication protein
JOJBGKCH_02337 8.4e-168 dnaG 3.6.4.12 L DnaB-like helicase C terminal domain
JOJBGKCH_02338 4.4e-85
JOJBGKCH_02345 0.0 U TraM recognition site of TraD and TraG
JOJBGKCH_02348 1.9e-204
JOJBGKCH_02351 2.7e-10
JOJBGKCH_02352 0.0 3.2.1.97 GH101 M Psort location Cellwall, score
JOJBGKCH_02353 7e-240 L Transposase DDE domain
JOJBGKCH_02354 1.6e-08 3.1.3.48 D Domain of Unknown Function (DUF1542)
JOJBGKCH_02355 1.9e-06 ispH 1.17.7.4 J negative regulation of cytoplasmic translation
JOJBGKCH_02356 4.2e-176
JOJBGKCH_02363 9.1e-135 3.4.22.70 M sortase family
JOJBGKCH_02365 1.9e-44 dnaG L DNA primase activity
JOJBGKCH_02366 9.1e-171
JOJBGKCH_02369 2.9e-24
JOJBGKCH_02370 2.6e-35
JOJBGKCH_02371 1.8e-213 uvrX 2.7.7.7 L Belongs to the DNA polymerase type-Y family
JOJBGKCH_02372 1.5e-227 tagE 2.4.1.52 GT4 M Glycosyl transferases group 1
JOJBGKCH_02378 8.7e-136
JOJBGKCH_02379 1.1e-192 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_02380 0.0 U Psort location Cytoplasmic, score
JOJBGKCH_02381 0.0
JOJBGKCH_02384 5.8e-100 L Transposase
JOJBGKCH_02385 6.9e-97 L Transposase
JOJBGKCH_02386 2.3e-31 dam 2.1.1.72 L site-specific DNA-methyltransferase (Adenine-specific)
JOJBGKCH_02387 3.2e-72 rnhA 3.1.26.4 L Caulimovirus viroplasmin
JOJBGKCH_02389 9.7e-100
JOJBGKCH_02390 8.7e-30
JOJBGKCH_02391 2.6e-189 xerS L Belongs to the 'phage' integrase family
JOJBGKCH_02392 4.9e-56 sip M LysM domain protein
JOJBGKCH_02393 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
JOJBGKCH_02397 1.7e-244 L COG2963 Transposase and inactivated derivatives
JOJBGKCH_02403 5e-214
JOJBGKCH_02405 1.4e-180 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
JOJBGKCH_02406 3.6e-50 higB-2 S RelE toxin of RelE / RelB toxin-antitoxin system
JOJBGKCH_02407 1.8e-39 K Helix-turn-helix XRE-family like proteins
JOJBGKCH_02409 1e-20 S Domain of unknown function (DUF4160)
JOJBGKCH_02410 4.2e-31
JOJBGKCH_02411 1.1e-17
JOJBGKCH_02412 2.9e-16 rnhA 3.1.26.4 L PIF1-like helicase
JOJBGKCH_02415 1.3e-99 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
JOJBGKCH_02416 3.5e-222 L Transposase
JOJBGKCH_02418 1.6e-93
JOJBGKCH_02420 2.6e-222 L Transposase
JOJBGKCH_02422 2.7e-94 L Integrase
JOJBGKCH_02424 5.7e-172
JOJBGKCH_02425 4e-226 L Transposase
JOJBGKCH_02426 1.1e-238 XK27_00500 L the current gene model (or a revised gene model) may contain a
JOJBGKCH_02427 3.3e-222 L Transposase
JOJBGKCH_02428 4.1e-71 S COG NOG38524 non supervised orthologous group
JOJBGKCH_02445 9.1e-76 sip L Belongs to the 'phage' integrase family
JOJBGKCH_02448 9.8e-18 K Transcriptional
JOJBGKCH_02450 2.3e-113 K BRO family, N-terminal domain
JOJBGKCH_02452 4.3e-07
JOJBGKCH_02456 5.3e-68 S Protein of unknown function (DUF1351)
JOJBGKCH_02457 6.3e-77 S ERF superfamily
JOJBGKCH_02458 1.1e-64 L DnaD domain protein
JOJBGKCH_02463 8.2e-10
JOJBGKCH_02466 9.8e-08
JOJBGKCH_02467 7.4e-49 S ASCH domain
JOJBGKCH_02469 2.6e-86 L transposase activity
JOJBGKCH_02470 2.8e-222 S Terminase RNAseH like domain
JOJBGKCH_02471 2.2e-216 S Phage portal protein, SPP1 Gp6-like
JOJBGKCH_02472 1.1e-164 S Phage minor capsid protein 2
JOJBGKCH_02474 1e-36 S Phage minor structural protein GP20
JOJBGKCH_02475 4.6e-154 gpG
JOJBGKCH_02476 1.4e-44
JOJBGKCH_02477 1.6e-39 S Minor capsid protein
JOJBGKCH_02478 4e-31 S Minor capsid protein
JOJBGKCH_02479 3e-51 S Minor capsid protein from bacteriophage
JOJBGKCH_02480 4.2e-84 N domain, Protein
JOJBGKCH_02481 8.7e-35
JOJBGKCH_02482 5.5e-86 S Bacteriophage Gp15 protein
JOJBGKCH_02483 0.0 xkdO D NLP P60 protein
JOJBGKCH_02484 5.6e-109 S phage tail
JOJBGKCH_02485 0.0 S Phage minor structural protein
JOJBGKCH_02490 3e-12 S peptidoglycan catabolic process
JOJBGKCH_02496 1.4e-38 S Bacteriophage holin of superfamily 6 (Holin_LLH)
JOJBGKCH_02497 1.1e-103 M hydrolase, family 25
JOJBGKCH_02498 6.1e-227 L COG3547 Transposase and inactivated derivatives
JOJBGKCH_02499 2.6e-24
JOJBGKCH_02500 2.3e-33 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
JOJBGKCH_02501 1.4e-192 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_02513 7.9e-224 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
JOJBGKCH_02514 2.6e-202 cpoA GT4 M Glycosyltransferase, group 1 family protein
JOJBGKCH_02515 1.8e-171 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JOJBGKCH_02516 6.3e-221 L Transposase
JOJBGKCH_02517 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
JOJBGKCH_02518 1.7e-29 secG U Preprotein translocase
JOJBGKCH_02519 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
JOJBGKCH_02520 5.1e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
JOJBGKCH_02521 1.2e-85 S COG NOG38524 non supervised orthologous group
JOJBGKCH_02524 1e-193 L Transposase
JOJBGKCH_02525 5.1e-18 L Transposase
JOJBGKCH_02526 1.7e-151 psaA P Belongs to the bacterial solute-binding protein 9 family
JOJBGKCH_02529 8.7e-218 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
JOJBGKCH_02530 2.4e-246 qacA EGP Major facilitator Superfamily
JOJBGKCH_02531 0.0 sacX 2.7.1.208, 2.7.1.211 G phosphotransferase system
JOJBGKCH_02532 3.1e-151 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
JOJBGKCH_02533 1.4e-183 yfeW 3.4.16.4 V Beta-lactamase
JOJBGKCH_02534 3.1e-187 S Bacterial protein of unknown function (DUF871)
JOJBGKCH_02535 4.5e-144 ybbH_2 K rpiR family
JOJBGKCH_02536 7e-23 cydA 1.10.3.14 C ubiquinol oxidase
JOJBGKCH_02537 6.8e-235 L Transposase DDE domain
JOJBGKCH_02538 6.4e-243 cydA 1.10.3.14 C ubiquinol oxidase
JOJBGKCH_02539 2.5e-173 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
JOJBGKCH_02540 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
JOJBGKCH_02541 4.1e-269 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
JOJBGKCH_02542 2.2e-128 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
JOJBGKCH_02543 6.1e-177 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
JOJBGKCH_02544 3.6e-160 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
JOJBGKCH_02545 1.2e-230 ndh 1.6.99.3 C NADH dehydrogenase
JOJBGKCH_02546 1.6e-43 1.3.5.4 C FAD binding domain
JOJBGKCH_02547 1.6e-85 3.6.4.12 S PD-(D/E)XK nuclease family transposase
JOJBGKCH_02548 2.6e-169 K LysR substrate binding domain
JOJBGKCH_02549 6.4e-122 3.6.1.27 I Acid phosphatase homologues
JOJBGKCH_02550 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
JOJBGKCH_02551 6.8e-298 ytgP S Polysaccharide biosynthesis protein
JOJBGKCH_02552 4.3e-47 pspC KT PspC domain
JOJBGKCH_02554 1.6e-233 dacA 3.4.16.4 M Belongs to the peptidase S11 family
JOJBGKCH_02555 6.4e-151 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JOJBGKCH_02556 7.9e-99 M ErfK YbiS YcfS YnhG
JOJBGKCH_02557 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
JOJBGKCH_02558 6e-171 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
JOJBGKCH_02559 1.4e-192 L Transposase and inactivated derivatives, IS30 family
JOJBGKCH_02560 3e-90 S PFAM Archaeal ATPase
JOJBGKCH_02561 5.1e-91 S PFAM Archaeal ATPase
JOJBGKCH_02562 7.7e-26
JOJBGKCH_02563 4.3e-76 menA 2.5.1.74 H UbiA prenyltransferase family
JOJBGKCH_02564 1.7e-196 S Uncharacterised protein family (UPF0236)
JOJBGKCH_02565 1.2e-208 L Transposase
JOJBGKCH_02566 1.9e-75 M LysM domain
JOJBGKCH_02567 4.5e-43
JOJBGKCH_02570 9.6e-184 L DDE superfamily endonuclease
JOJBGKCH_02571 4.9e-35
JOJBGKCH_02572 2.9e-73 yniG EGP Major facilitator Superfamily
JOJBGKCH_02573 9.2e-237 L transposase, IS605 OrfB family
JOJBGKCH_02574 4.7e-92 yniG EGP Major facilitator Superfamily
JOJBGKCH_02575 7e-178 L Transposase
JOJBGKCH_02576 2e-21 L Transposase
JOJBGKCH_02577 7.3e-184 S cog cog1373
JOJBGKCH_02578 3.3e-163 L An automated process has identified a potential problem with this gene model
JOJBGKCH_02579 5.6e-179 S PFAM Archaeal ATPase
JOJBGKCH_02580 1.8e-193 I transferase activity, transferring acyl groups other than amino-acyl groups
JOJBGKCH_02581 7.4e-128 citG 2.4.2.52, 2.7.7.61 H 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase
JOJBGKCH_02582 1.6e-140 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
JOJBGKCH_02583 2.9e-78 G Phosphoglycerate mutase family
JOJBGKCH_02584 8.9e-10 G Phosphoglycerate mutase family
JOJBGKCH_02585 0.0 ppsA 2.7.9.2 H Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate
JOJBGKCH_02586 6.5e-151 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
JOJBGKCH_02587 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
JOJBGKCH_02588 7.2e-56 yheA S Belongs to the UPF0342 family
JOJBGKCH_02589 1.5e-230 yhaO L Ser Thr phosphatase family protein
JOJBGKCH_02590 0.0 L AAA domain
JOJBGKCH_02591 1.9e-186 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
JOJBGKCH_02592 2.9e-23
JOJBGKCH_02593 2.4e-51 S Domain of unknown function DUF1829
JOJBGKCH_02594 3.1e-265
JOJBGKCH_02595 1.5e-72 eda 4.1.2.14, 4.1.3.42 G KDPG and KHG aldolase
JOJBGKCH_02596 1.5e-153 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
JOJBGKCH_02597 3.9e-25
JOJBGKCH_02598 8.3e-78 hit FG Scavenger mRNA decapping enzyme C-term binding
JOJBGKCH_02599 1.7e-134 ecsA V ABC transporter, ATP-binding protein
JOJBGKCH_02600 2.9e-221 ecsB U ABC transporter
JOJBGKCH_02601 3.3e-126 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
JOJBGKCH_02602 5.1e-164 L An automated process has identified a potential problem with this gene model
JOJBGKCH_02603 2.8e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
JOJBGKCH_02604 2.4e-121 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
JOJBGKCH_02605 3.7e-185
JOJBGKCH_02606 6.1e-249 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
JOJBGKCH_02607 1.5e-234 mepA V MATE efflux family protein
JOJBGKCH_02608 8.4e-171 S SLAP domain
JOJBGKCH_02609 7.4e-74 L Putative transposase DNA-binding domain
JOJBGKCH_02610 1.7e-84 L Putative transposase DNA-binding domain
JOJBGKCH_02611 1.4e-83 L Resolvase, N-terminal
JOJBGKCH_02612 1.2e-157 M Peptidase family M1 domain
JOJBGKCH_02613 1.3e-192 S Bacteriocin helveticin-J
JOJBGKCH_02614 1.6e-18
JOJBGKCH_02615 2.4e-50 L RelB antitoxin
JOJBGKCH_02616 9.1e-140 qmcA O prohibitin homologues
JOJBGKCH_02617 3.2e-199 purD 6.3.4.13 F Belongs to the GARS family
JOJBGKCH_02618 3.7e-174 L Bifunctional protein
JOJBGKCH_02619 4.7e-13 rhaR K helix_turn_helix, arabinose operon control protein
JOJBGKCH_02620 2.5e-21 L DDE superfamily endonuclease
JOJBGKCH_02621 9.6e-136 L DDE superfamily endonuclease
JOJBGKCH_02622 7.4e-150 fhaB M Rib/alpha-like repeat
JOJBGKCH_02623 5.6e-81 fhaB M Rib/alpha-like repeat
JOJBGKCH_02624 7.7e-22
JOJBGKCH_02625 9.3e-64 L PFAM IS66 Orf2 family protein
JOJBGKCH_02626 8.7e-34 S Transposase C of IS166 homeodomain
JOJBGKCH_02627 1.9e-245 L Transposase IS66 family
JOJBGKCH_02629 1.9e-200 L Transposase
JOJBGKCH_02630 5e-226 L Transposase
JOJBGKCH_02631 3.4e-164 msmX P Belongs to the ABC transporter superfamily
JOJBGKCH_02632 9.3e-200 L Transposase
JOJBGKCH_02633 3.8e-30
JOJBGKCH_02634 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JOJBGKCH_02635 9.4e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
JOJBGKCH_02636 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
JOJBGKCH_02637 3.9e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JOJBGKCH_02638 8.6e-251 dnaB L Replication initiation and membrane attachment
JOJBGKCH_02639 1.3e-168 dnaI L Primosomal protein DnaI
JOJBGKCH_02640 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JOJBGKCH_02641 4.3e-75

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)