ORF_ID e_value Gene_name EC_number CAZy COGs Description
LMBEFIBJ_00001 4.6e-285 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LMBEFIBJ_00002 2.9e-207 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
LMBEFIBJ_00003 1.9e-223 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LMBEFIBJ_00004 8.7e-81 S Protein of unknown function (DUF721)
LMBEFIBJ_00005 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LMBEFIBJ_00006 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LMBEFIBJ_00007 1.2e-81 S Transmembrane domain of unknown function (DUF3566)
LMBEFIBJ_00008 3.8e-273 S ATPase domain predominantly from Archaea
LMBEFIBJ_00009 3.4e-14 K helix_turn _helix lactose operon repressor
LMBEFIBJ_00010 1.9e-250 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
LMBEFIBJ_00011 2.2e-26 S addiction module toxin, RelE StbE family
LMBEFIBJ_00012 1.3e-28 relB L RelB antitoxin
LMBEFIBJ_00013 2.9e-53 L PFAM Integrase catalytic
LMBEFIBJ_00014 1.2e-32 tnpA L Transposase
LMBEFIBJ_00015 5.6e-38
LMBEFIBJ_00017 1.7e-07 L Phage integrase family
LMBEFIBJ_00020 6.4e-70 cpdB 3.1.3.6, 3.1.4.16 F Calcineurin-like phosphoesterase
LMBEFIBJ_00021 1.7e-81 3.6.1.63 U Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00022 1.7e-76 phnE 3.6.1.63 U Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00023 5.7e-82 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
LMBEFIBJ_00024 1.8e-114 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
LMBEFIBJ_00025 3.2e-36 K Helix-turn-helix domain, rpiR family
LMBEFIBJ_00026 4.8e-30 S phosphoglycolate phosphatase activity
LMBEFIBJ_00027 1.9e-202 S Domain of unknown function (DUF4143)
LMBEFIBJ_00028 3.3e-145 S Protein of unknown function DUF45
LMBEFIBJ_00030 1.4e-256 S Domain of unknown function (DUF4143)
LMBEFIBJ_00031 1.6e-82 dps P Belongs to the Dps family
LMBEFIBJ_00032 1e-235 ytfL P Transporter associated domain
LMBEFIBJ_00033 2.8e-202 S AAA ATPase domain
LMBEFIBJ_00034 3.5e-72 V Forkhead associated domain
LMBEFIBJ_00035 1.6e-120 cah 4.2.1.1 P Reversible hydration of carbon dioxide
LMBEFIBJ_00036 3.8e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
LMBEFIBJ_00037 0.0 trxB1 1.8.1.9 C Thioredoxin domain
LMBEFIBJ_00038 9.5e-239 yhjX EGP Major facilitator Superfamily
LMBEFIBJ_00039 2.2e-40 S Psort location Cytoplasmic, score
LMBEFIBJ_00040 4.6e-268 L PFAM Integrase catalytic
LMBEFIBJ_00041 3.9e-197 L Transposase, Mutator family
LMBEFIBJ_00042 1.4e-297 M probably involved in cell wall
LMBEFIBJ_00043 1.3e-185 K helix_turn _helix lactose operon repressor
LMBEFIBJ_00044 3.7e-254 G Bacterial extracellular solute-binding protein
LMBEFIBJ_00045 1.6e-158 G Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00046 1.1e-150 P Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00047 2.3e-228 M Protein of unknown function (DUF2961)
LMBEFIBJ_00048 4.9e-143 I alpha/beta hydrolase fold
LMBEFIBJ_00049 2e-24 L PFAM Integrase catalytic
LMBEFIBJ_00050 8.8e-234 S AAA domain
LMBEFIBJ_00051 1.5e-308 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
LMBEFIBJ_00052 3.8e-24 trxB1 1.8.1.9 C Thioredoxin domain
LMBEFIBJ_00053 5.8e-191 oppA5 E family 5
LMBEFIBJ_00054 1.9e-122 appB P PFAM binding-protein-dependent transport systems inner membrane component
LMBEFIBJ_00055 2.5e-89 appC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
LMBEFIBJ_00056 1.4e-153 P Belongs to the ABC transporter superfamily
LMBEFIBJ_00057 5.6e-79 ybfG M Domain of unknown function (DUF1906)
LMBEFIBJ_00059 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
LMBEFIBJ_00060 0.0 yjjP S Threonine/Serine exporter, ThrE
LMBEFIBJ_00061 1.1e-300 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LMBEFIBJ_00062 2.3e-184 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
LMBEFIBJ_00063 1.7e-309 S Amidohydrolase family
LMBEFIBJ_00064 1.2e-202 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
LMBEFIBJ_00065 5.7e-38 S Protein of unknown function (DUF3073)
LMBEFIBJ_00066 4.7e-106 K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
LMBEFIBJ_00067 1.2e-208 2.7.13.3 T Histidine kinase
LMBEFIBJ_00068 6.3e-236 EGP Major Facilitator Superfamily
LMBEFIBJ_00069 7.5e-76 I Sterol carrier protein
LMBEFIBJ_00070 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
LMBEFIBJ_00071 1.7e-31
LMBEFIBJ_00072 2.9e-125 gluP 3.4.21.105 S Rhomboid family
LMBEFIBJ_00073 9.6e-80 crgA D Involved in cell division
LMBEFIBJ_00074 2.9e-108 S Bacterial protein of unknown function (DUF881)
LMBEFIBJ_00075 7.3e-236 srtA 3.4.22.70 M Sortase family
LMBEFIBJ_00076 1.1e-118 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
LMBEFIBJ_00077 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
LMBEFIBJ_00078 1.3e-171 T Protein tyrosine kinase
LMBEFIBJ_00079 2.9e-260 pbpA M penicillin-binding protein
LMBEFIBJ_00080 2.7e-251 rodA D Belongs to the SEDS family
LMBEFIBJ_00081 4.6e-241 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
LMBEFIBJ_00082 8e-59 fhaB T Inner membrane component of T3SS, cytoplasmic domain
LMBEFIBJ_00083 2.6e-129 fhaA T Protein of unknown function (DUF2662)
LMBEFIBJ_00084 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
LMBEFIBJ_00085 1.1e-206 pldB 3.1.1.5 I Serine aminopeptidase, S33
LMBEFIBJ_00086 3.4e-148 yddG EG EamA-like transporter family
LMBEFIBJ_00087 6.6e-230 S Putative esterase
LMBEFIBJ_00088 0.0 lysX S Uncharacterised conserved protein (DUF2156)
LMBEFIBJ_00089 2.1e-190 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LMBEFIBJ_00090 3e-110 S Pyridoxamine 5'-phosphate oxidase
LMBEFIBJ_00091 3.3e-119 S Domain of unknown function (DUF4928)
LMBEFIBJ_00092 4.4e-166 dcm 2.1.1.37 L Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
LMBEFIBJ_00093 6.6e-51 ybjQ S Putative heavy-metal-binding
LMBEFIBJ_00094 4.5e-128 yplQ S Haemolysin-III related
LMBEFIBJ_00095 5.1e-64 hsp20 O Hsp20/alpha crystallin family
LMBEFIBJ_00096 3.8e-60 yoaZ S PfpI family
LMBEFIBJ_00098 4.4e-32 T Toxic component of a toxin-antitoxin (TA) module
LMBEFIBJ_00101 1e-25 L Transposase DDE domain
LMBEFIBJ_00103 1.2e-257 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
LMBEFIBJ_00104 3.1e-247 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
LMBEFIBJ_00105 0.0 cadA P E1-E2 ATPase
LMBEFIBJ_00106 8.6e-195 urtA E Receptor family ligand binding region
LMBEFIBJ_00107 2.5e-129 urtB U Branched-chain amino acid transport system / permease component
LMBEFIBJ_00108 2.6e-160 urtC U Branched-chain amino acid transport system / permease component
LMBEFIBJ_00109 1.7e-112 urtD S Branched-chain amino acid ATP-binding cassette transporter
LMBEFIBJ_00110 8.2e-99 urtE E ABC transporter
LMBEFIBJ_00111 3.9e-110 hoxN S rRNA processing
LMBEFIBJ_00112 3.2e-95 ureB 3.5.1.5 E Urease, gamma subunit
LMBEFIBJ_00113 1.7e-304 ureC 3.5.1.5 E Urease alpha-subunit, N-terminal domain
LMBEFIBJ_00114 5.5e-86 ureE O Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
LMBEFIBJ_00115 6.8e-81 ureF J Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
LMBEFIBJ_00116 3.2e-99 ureG KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
LMBEFIBJ_00117 1.8e-92 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
LMBEFIBJ_00118 5.2e-266 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
LMBEFIBJ_00119 1.8e-157 htpX O Belongs to the peptidase M48B family
LMBEFIBJ_00121 4.8e-205 EGP Major Facilitator Superfamily
LMBEFIBJ_00122 8.4e-119 mug 3.2.2.28, 6.3.3.2 L Uracil DNA glycosylase superfamily
LMBEFIBJ_00123 1.4e-206 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
LMBEFIBJ_00124 3.3e-11 S AAA ATPase domain
LMBEFIBJ_00126 2e-252 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LMBEFIBJ_00127 7.7e-280 clcA P Voltage gated chloride channel
LMBEFIBJ_00128 8.3e-116 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LMBEFIBJ_00129 3.8e-53 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LMBEFIBJ_00130 2.1e-202 K helix_turn _helix lactose operon repressor
LMBEFIBJ_00131 1.3e-298 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
LMBEFIBJ_00132 5.4e-271 scrT G Transporter major facilitator family protein
LMBEFIBJ_00133 5.5e-253 yhjE EGP Sugar (and other) transporter
LMBEFIBJ_00134 3.4e-202 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LMBEFIBJ_00135 1.8e-51 bioN P Cobalt transport protein
LMBEFIBJ_00136 1.5e-71 cbiO P ATPases associated with a variety of cellular activities
LMBEFIBJ_00137 1.5e-58 bioY S BioY family
LMBEFIBJ_00138 1.4e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LMBEFIBJ_00139 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
LMBEFIBJ_00140 2.9e-185 K Psort location Cytoplasmic, score
LMBEFIBJ_00141 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
LMBEFIBJ_00142 0.0 phoA 3.1.3.1, 3.1.3.39 P Alkaline phosphatase homologues
LMBEFIBJ_00143 0.0 dnaK O Heat shock 70 kDa protein
LMBEFIBJ_00144 3.1e-55 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LMBEFIBJ_00145 1.3e-169 dnaJ1 O DnaJ molecular chaperone homology domain
LMBEFIBJ_00146 3.4e-98 hspR K transcriptional regulator, MerR family
LMBEFIBJ_00147 1.7e-214 F Psort location CytoplasmicMembrane, score 10.00
LMBEFIBJ_00148 6.4e-207 luxE 6.2.1.19 H long-chain-fatty-acid--luciferin-component ligase, acyl-protein synthase
LMBEFIBJ_00149 2.7e-229 luxC 1.2.1.50 C Acyl-CoA reductase (LuxC)
LMBEFIBJ_00150 3.6e-140 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
LMBEFIBJ_00151 5.3e-124 S HAD hydrolase, family IA, variant 3
LMBEFIBJ_00152 6.1e-134 dedA S SNARE associated Golgi protein
LMBEFIBJ_00153 2.9e-93 cpaE D bacterial-type flagellum organization
LMBEFIBJ_00154 3.6e-191 cpaF U Type II IV secretion system protein
LMBEFIBJ_00155 5.4e-105 U Type ii secretion system
LMBEFIBJ_00156 4.8e-100 gspF NU Type II secretion system (T2SS), protein F
LMBEFIBJ_00157 4.6e-40 S Protein of unknown function (DUF4244)
LMBEFIBJ_00158 1.5e-53 S TIGRFAM helicase secretion neighborhood TadE-like protein
LMBEFIBJ_00159 1.2e-213 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
LMBEFIBJ_00160 9e-99 K Bacterial regulatory proteins, tetR family
LMBEFIBJ_00161 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
LMBEFIBJ_00162 1.9e-109 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LMBEFIBJ_00163 9.4e-198 3.4.22.70 M Sortase family
LMBEFIBJ_00164 2.8e-53 S Psort location Cytoplasmic, score
LMBEFIBJ_00165 2.3e-131 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
LMBEFIBJ_00166 8e-97 askB 1.1.1.3, 2.7.2.4 E ACT domain
LMBEFIBJ_00167 3.9e-209 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LMBEFIBJ_00168 3.9e-113
LMBEFIBJ_00169 7.4e-310 S Calcineurin-like phosphoesterase
LMBEFIBJ_00170 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LMBEFIBJ_00171 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
LMBEFIBJ_00172 7.3e-167 3.6.1.27 I PAP2 superfamily
LMBEFIBJ_00173 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LMBEFIBJ_00174 4e-122 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LMBEFIBJ_00175 4.9e-202 holB 2.7.7.7 L DNA polymerase III
LMBEFIBJ_00176 1.7e-100 K helix_turn _helix lactose operon repressor
LMBEFIBJ_00177 3.3e-37 ptsH G PTS HPr component phosphorylation site
LMBEFIBJ_00179 4.7e-291 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LMBEFIBJ_00180 2.1e-105 S Phosphatidylethanolamine-binding protein
LMBEFIBJ_00181 0.0 pepD E Peptidase family C69
LMBEFIBJ_00182 5.7e-291 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
LMBEFIBJ_00183 5.1e-62 S Macrophage migration inhibitory factor (MIF)
LMBEFIBJ_00184 2.4e-95 S GtrA-like protein
LMBEFIBJ_00185 2.5e-203 rnr 3.6.4.12 K Putative DNA-binding domain
LMBEFIBJ_00186 2.5e-259 EGP Major facilitator Superfamily
LMBEFIBJ_00187 9.9e-123 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
LMBEFIBJ_00188 2.2e-157
LMBEFIBJ_00189 3.6e-165 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
LMBEFIBJ_00190 2.7e-144 S Protein of unknown function (DUF805)
LMBEFIBJ_00192 3.3e-55 V Abi-like protein
LMBEFIBJ_00193 8.8e-292 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LMBEFIBJ_00196 1.8e-68
LMBEFIBJ_00197 2.2e-135 yoaK S Protein of unknown function (DUF1275)
LMBEFIBJ_00198 2.2e-96 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
LMBEFIBJ_00200 2.3e-311
LMBEFIBJ_00201 0.0 efeU_1 P Iron permease FTR1 family
LMBEFIBJ_00202 5.5e-108 tpd P Fe2+ transport protein
LMBEFIBJ_00203 9.1e-226 S Predicted membrane protein (DUF2318)
LMBEFIBJ_00204 1.4e-213 macB_2 V ABC transporter permease
LMBEFIBJ_00205 3.1e-215 Z012_06715 V FtsX-like permease family
LMBEFIBJ_00206 2.6e-146 macB V ABC transporter, ATP-binding protein
LMBEFIBJ_00207 2.8e-65 S FMN_bind
LMBEFIBJ_00208 3.2e-104 K Psort location Cytoplasmic, score 8.87
LMBEFIBJ_00209 3e-309 pip S YhgE Pip domain protein
LMBEFIBJ_00210 0.0 pip S YhgE Pip domain protein
LMBEFIBJ_00211 9.6e-231 S Putative ABC-transporter type IV
LMBEFIBJ_00212 2.2e-268 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LMBEFIBJ_00213 1e-132 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
LMBEFIBJ_00214 8.5e-182 opcA G Glucose-6-phosphate dehydrogenase subunit
LMBEFIBJ_00215 3e-300 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LMBEFIBJ_00217 2.6e-39
LMBEFIBJ_00219 4.3e-50 EGP Transmembrane secretion effector
LMBEFIBJ_00220 6e-35 K helix_turn_helix, Lux Regulon
LMBEFIBJ_00221 5e-16 2.7.13.3 T Histidine kinase
LMBEFIBJ_00222 5.2e-12
LMBEFIBJ_00223 7e-260 pepD E Peptidase family C69
LMBEFIBJ_00224 3.4e-186 XK27_01805 M Glycosyltransferase like family 2
LMBEFIBJ_00225 2.4e-122 icaR K Bacterial regulatory proteins, tetR family
LMBEFIBJ_00226 2.8e-45 S Protein of unknown function (DUF2089)
LMBEFIBJ_00227 1e-16
LMBEFIBJ_00228 2.1e-169 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
LMBEFIBJ_00229 3.4e-228 amt U Ammonium Transporter Family
LMBEFIBJ_00230 1e-54 glnB K Nitrogen regulatory protein P-II
LMBEFIBJ_00231 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
LMBEFIBJ_00232 2.1e-250 dinF V MatE
LMBEFIBJ_00233 2.1e-277 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
LMBEFIBJ_00234 5.1e-260 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
LMBEFIBJ_00235 8.3e-142 cobQ S CobB/CobQ-like glutamine amidotransferase domain
LMBEFIBJ_00236 1e-31 S granule-associated protein
LMBEFIBJ_00237 0.0 ubiB S ABC1 family
LMBEFIBJ_00238 1e-132 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LMBEFIBJ_00239 7.6e-191 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LMBEFIBJ_00240 4.6e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
LMBEFIBJ_00241 9.7e-70 ssb1 L Single-stranded DNA-binding protein
LMBEFIBJ_00242 2.6e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LMBEFIBJ_00243 8.6e-70 rplI J Binds to the 23S rRNA
LMBEFIBJ_00245 4.1e-39 L Transposase
LMBEFIBJ_00246 3.8e-117
LMBEFIBJ_00247 4e-130 V ABC transporter
LMBEFIBJ_00248 3.8e-134 sagI S ABC-2 type transporter
LMBEFIBJ_00249 1.7e-75 V ATPases associated with a variety of cellular activities
LMBEFIBJ_00250 6.2e-107 K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
LMBEFIBJ_00251 1.1e-201 2.7.13.3 T Histidine kinase
LMBEFIBJ_00252 9.7e-201 EGP Major Facilitator Superfamily
LMBEFIBJ_00253 1.6e-94 uhpT EGP Major facilitator Superfamily
LMBEFIBJ_00254 1.4e-131 alfA 3.2.1.51 GH29 G Alpha-L-fucosidase
LMBEFIBJ_00256 4e-125 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
LMBEFIBJ_00257 0.0 pacS 1.9.3.1, 3.6.3.54 P E1-E2 ATPase
LMBEFIBJ_00258 1.6e-42 csoR S Metal-sensitive transcriptional repressor
LMBEFIBJ_00259 9.4e-187 rmuC S RmuC family
LMBEFIBJ_00260 4.7e-98 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LMBEFIBJ_00261 1.4e-158 spoU 2.1.1.185 J RNA methyltransferase TrmH family
LMBEFIBJ_00262 3.5e-185 K Psort location Cytoplasmic, score
LMBEFIBJ_00263 2e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LMBEFIBJ_00264 8.6e-287 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
LMBEFIBJ_00265 1.2e-285 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LMBEFIBJ_00266 2e-197 2.3.1.57 J Acetyltransferase (GNAT) domain
LMBEFIBJ_00267 3.3e-52 S Protein of unknown function (DUF2469)
LMBEFIBJ_00268 3.2e-283 S Histidine phosphatase superfamily (branch 2)
LMBEFIBJ_00269 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
LMBEFIBJ_00270 6.1e-240 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
LMBEFIBJ_00271 3.1e-201 K helix_turn _helix lactose operon repressor
LMBEFIBJ_00272 1.5e-245 gutA G Psort location CytoplasmicMembrane, score 10.00
LMBEFIBJ_00273 0.0 uidA G Belongs to the glycosyl hydrolase 2 family
LMBEFIBJ_00274 2.1e-61 L Transposase
LMBEFIBJ_00275 7.2e-168 tnp7109-2 L PFAM Transposase, Mutator family
LMBEFIBJ_00276 1.8e-156 L Phage integrase, N-terminal SAM-like domain
LMBEFIBJ_00277 4.9e-47 insK L Integrase core domain
LMBEFIBJ_00278 2e-62 tyrA 5.4.99.5 E Chorismate mutase type II
LMBEFIBJ_00279 6e-296 S domain protein
LMBEFIBJ_00280 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
LMBEFIBJ_00281 3.8e-279 E Bacterial extracellular solute-binding proteins, family 5 Middle
LMBEFIBJ_00282 2.5e-129 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LMBEFIBJ_00283 3.7e-132 KT Transcriptional regulatory protein, C terminal
LMBEFIBJ_00284 4e-82
LMBEFIBJ_00285 1.6e-97 mntP P Probably functions as a manganese efflux pump
LMBEFIBJ_00286 2.8e-90 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
LMBEFIBJ_00287 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
LMBEFIBJ_00288 0.0 K RNA polymerase II activating transcription factor binding
LMBEFIBJ_00289 6.2e-75 S Psort location Cytoplasmic, score 8.87
LMBEFIBJ_00291 6.7e-58 G Hypothetical glycosyl hydrolase 6
LMBEFIBJ_00292 1e-202 L Phage integrase family
LMBEFIBJ_00293 7e-71 pstIR 2.1.1.72, 3.1.21.4 L BsuBI/PstI restriction endonuclease C-terminus
LMBEFIBJ_00294 8.5e-21 E Glyoxalase-like domain
LMBEFIBJ_00295 9.5e-95 K Psort location Cytoplasmic, score 8.87
LMBEFIBJ_00296 6.9e-17
LMBEFIBJ_00297 4.6e-17 S Plasmid replication protein
LMBEFIBJ_00298 9.1e-55 S Plasmid replication protein
LMBEFIBJ_00299 5.9e-104 D ftsk spoiiie
LMBEFIBJ_00300 1.1e-20
LMBEFIBJ_00301 1.1e-09
LMBEFIBJ_00302 8.6e-84
LMBEFIBJ_00305 8.9e-12
LMBEFIBJ_00306 8.5e-23 S Ribonuclease toxin, BrnT, of type II toxin-antitoxin system
LMBEFIBJ_00307 4.2e-205 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LMBEFIBJ_00308 1.7e-145 atpB C it plays a direct role in the translocation of protons across the membrane
LMBEFIBJ_00309 1.5e-30 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LMBEFIBJ_00310 2.7e-59 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LMBEFIBJ_00311 1.2e-146 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LMBEFIBJ_00312 3.7e-304 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LMBEFIBJ_00313 4.1e-159 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LMBEFIBJ_00314 1.5e-280 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LMBEFIBJ_00315 1.6e-48 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
LMBEFIBJ_00316 5e-134 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
LMBEFIBJ_00317 9.2e-157 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
LMBEFIBJ_00318 8.1e-183
LMBEFIBJ_00319 1.2e-180
LMBEFIBJ_00320 3.7e-166 trxA2 O Tetratricopeptide repeat
LMBEFIBJ_00321 2.4e-118 cyaA 4.6.1.1 S CYTH
LMBEFIBJ_00323 1e-63 psp1 3.5.99.10 J Endoribonuclease L-PSP
LMBEFIBJ_00324 2.9e-179 plsC2 2.3.1.51 I Phosphate acyltransferases
LMBEFIBJ_00325 3.2e-181 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
LMBEFIBJ_00326 1.2e-227 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
LMBEFIBJ_00327 1.2e-208 P Bacterial extracellular solute-binding protein
LMBEFIBJ_00328 3.9e-157 U Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00329 3.2e-127 U Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00330 1.9e-226 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
LMBEFIBJ_00331 9.2e-176 S CAAX protease self-immunity
LMBEFIBJ_00332 1.2e-127 M Mechanosensitive ion channel
LMBEFIBJ_00333 2.3e-270 aspA 4.3.1.1 E Fumarase C C-terminus
LMBEFIBJ_00334 4.8e-131 K Bacterial regulatory proteins, tetR family
LMBEFIBJ_00335 2.1e-239 MA20_36090 S Psort location Cytoplasmic, score 8.87
LMBEFIBJ_00336 2.2e-90 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LMBEFIBJ_00337 5.8e-11 XK27_04590 S NADPH-dependent FMN reductase
LMBEFIBJ_00342 3.5e-08 yxiO G Major facilitator Superfamily
LMBEFIBJ_00343 9e-53 relB L RelB antitoxin
LMBEFIBJ_00344 7.1e-21 T Toxic component of a toxin-antitoxin (TA) module
LMBEFIBJ_00345 2.2e-131 K helix_turn_helix, mercury resistance
LMBEFIBJ_00346 1e-232 yxiO S Vacuole effluxer Atg22 like
LMBEFIBJ_00347 1.2e-196 yegV G pfkB family carbohydrate kinase
LMBEFIBJ_00348 5.5e-29 rpmB J Ribosomal L28 family
LMBEFIBJ_00349 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
LMBEFIBJ_00350 2.7e-70 K Bacterial regulatory proteins, lacI family
LMBEFIBJ_00351 3.1e-159 P Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00352 6.5e-171 P Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00353 4.4e-165 G Bacterial extracellular solute-binding protein
LMBEFIBJ_00354 4.5e-101 4.2.1.68 M Enolase C-terminal domain-like
LMBEFIBJ_00355 3.6e-102 uhpT EGP Major facilitator Superfamily
LMBEFIBJ_00356 3.7e-205 G Hypothetical glycosyl hydrolase 6
LMBEFIBJ_00357 2.3e-29 V Type II restriction enzyme, methylase subunits
LMBEFIBJ_00358 2.9e-44 L Transposase
LMBEFIBJ_00359 5.7e-98 rsmD 2.1.1.171 L Conserved hypothetical protein 95
LMBEFIBJ_00360 2.1e-154 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
LMBEFIBJ_00361 1.7e-293 yegQ O Peptidase family U32 C-terminal domain
LMBEFIBJ_00362 3.3e-183 yfiH Q Multi-copper polyphenol oxidoreductase laccase
LMBEFIBJ_00363 3.3e-158 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
LMBEFIBJ_00364 3.5e-123 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
LMBEFIBJ_00365 2e-57 D nuclear chromosome segregation
LMBEFIBJ_00366 3.3e-266 pepC 3.4.22.40 E Peptidase C1-like family
LMBEFIBJ_00367 9.4e-214 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LMBEFIBJ_00368 4e-234 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
LMBEFIBJ_00369 4.8e-123 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LMBEFIBJ_00370 2.8e-230 EGP Sugar (and other) transporter
LMBEFIBJ_00371 4.8e-204 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
LMBEFIBJ_00372 1.8e-139 KT Transcriptional regulatory protein, C terminal
LMBEFIBJ_00373 4e-180 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
LMBEFIBJ_00374 3.5e-153 pstC P probably responsible for the translocation of the substrate across the membrane
LMBEFIBJ_00375 1.1e-168 pstA P Phosphate transport system permease
LMBEFIBJ_00376 1.2e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LMBEFIBJ_00377 6.7e-91 lemA S LemA family
LMBEFIBJ_00378 0.0 S Predicted membrane protein (DUF2207)
LMBEFIBJ_00379 2.2e-12 S Predicted membrane protein (DUF2207)
LMBEFIBJ_00380 3.4e-103 S Predicted membrane protein (DUF2207)
LMBEFIBJ_00381 5.3e-53 S Predicted membrane protein (DUF2207)
LMBEFIBJ_00382 7.9e-16
LMBEFIBJ_00383 1.6e-168 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
LMBEFIBJ_00384 8.5e-193 iunH1 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
LMBEFIBJ_00385 5.6e-122 K helix_turn _helix lactose operon repressor
LMBEFIBJ_00386 4.1e-141 G Bacterial extracellular solute-binding protein
LMBEFIBJ_00387 1.6e-118 U Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00388 7.6e-112 U Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00389 1.8e-226
LMBEFIBJ_00390 4.6e-166 2.7.11.1 S Pfam:HipA_N
LMBEFIBJ_00391 2.8e-45 K Helix-turn-helix XRE-family like proteins
LMBEFIBJ_00392 6.8e-110 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LMBEFIBJ_00393 6.1e-35 CP_0960 S Belongs to the UPF0109 family
LMBEFIBJ_00394 4.1e-59 rpsP J Belongs to the bacterial ribosomal protein bS16 family
LMBEFIBJ_00395 2.4e-139 pabC 2.6.1.42, 2.6.1.85, 4.1.3.38 E branched-chain-amino-acid transaminase activity
LMBEFIBJ_00396 1.9e-269 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH chorismate binding enzyme
LMBEFIBJ_00397 1.7e-212 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LMBEFIBJ_00398 5.2e-113 ribE 2.5.1.9 H Lumazine binding domain
LMBEFIBJ_00399 1.9e-236 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LMBEFIBJ_00400 2.5e-80 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
LMBEFIBJ_00401 1.2e-165 S Endonuclease/Exonuclease/phosphatase family
LMBEFIBJ_00402 1.7e-259 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LMBEFIBJ_00403 3.9e-162 P Cation efflux family
LMBEFIBJ_00404 9.1e-311 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
LMBEFIBJ_00405 4.1e-137 guaA1 6.3.5.2 F Peptidase C26
LMBEFIBJ_00406 0.0 yjjK S ABC transporter
LMBEFIBJ_00407 7.3e-63 vapC S Toxic component of a toxin-antitoxin (TA) module. An RNase
LMBEFIBJ_00408 2.1e-42 stbC S Plasmid stability protein
LMBEFIBJ_00409 1.7e-91 ilvN 2.2.1.6 E ACT domain
LMBEFIBJ_00410 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
LMBEFIBJ_00411 4.9e-131 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
LMBEFIBJ_00412 7.6e-31 rpmF J Belongs to the bacterial ribosomal protein bL32 family
LMBEFIBJ_00413 1.4e-118 yceD S Uncharacterized ACR, COG1399
LMBEFIBJ_00414 2e-118
LMBEFIBJ_00415 4.6e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LMBEFIBJ_00416 2e-51 S Protein of unknown function (DUF3039)
LMBEFIBJ_00417 5.8e-191 yghZ C Aldo/keto reductase family
LMBEFIBJ_00418 6.3e-70 soxR K MerR, DNA binding
LMBEFIBJ_00419 7.2e-115
LMBEFIBJ_00420 4e-248 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LMBEFIBJ_00421 2.9e-159
LMBEFIBJ_00422 1.6e-143 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
LMBEFIBJ_00423 3.5e-132 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LMBEFIBJ_00425 2.3e-213 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
LMBEFIBJ_00426 1e-240 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
LMBEFIBJ_00427 1.5e-223 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
LMBEFIBJ_00428 6.2e-169 S Auxin Efflux Carrier
LMBEFIBJ_00431 0.0 pgi 5.3.1.9 G Belongs to the GPI family
LMBEFIBJ_00432 4.3e-256 abcT3 P ATPases associated with a variety of cellular activities
LMBEFIBJ_00433 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00434 1.1e-59 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
LMBEFIBJ_00435 2.5e-139 lepB 3.4.21.89 U Belongs to the peptidase S26 family
LMBEFIBJ_00436 2.4e-145 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LMBEFIBJ_00437 2.1e-210 K helix_turn _helix lactose operon repressor
LMBEFIBJ_00438 1.6e-94 uhpT EGP Major facilitator Superfamily
LMBEFIBJ_00439 2.2e-137 alfA 3.2.1.51 GH29 G Alpha-L-fucosidase
LMBEFIBJ_00440 0.0 fadD 6.2.1.3 I AMP-binding enzyme
LMBEFIBJ_00441 7.1e-22 araE EGP Major facilitator Superfamily
LMBEFIBJ_00442 1.8e-98 cydD V ABC transporter transmembrane region
LMBEFIBJ_00443 1.7e-124 cydD V ABC transporter transmembrane region
LMBEFIBJ_00444 1.1e-247 araE EGP Major facilitator Superfamily
LMBEFIBJ_00445 9.1e-101 2.7.13.3 T Histidine kinase
LMBEFIBJ_00446 4.3e-41 K helix_turn_helix, Lux Regulon
LMBEFIBJ_00447 2.2e-19 S Bacteriocin (Lactococcin_972)
LMBEFIBJ_00448 1.3e-242 XK27_10205
LMBEFIBJ_00449 4.7e-101 V ABC transporter
LMBEFIBJ_00450 1.1e-26
LMBEFIBJ_00451 2.3e-25 L Transposase
LMBEFIBJ_00452 2.1e-19 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
LMBEFIBJ_00453 5.6e-171 K helix_turn _helix lactose operon repressor
LMBEFIBJ_00454 3e-80 ganB 3.2.1.89 G Glycosyl hydrolase family 53
LMBEFIBJ_00455 7.9e-126 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
LMBEFIBJ_00456 9.7e-135 L Protein of unknown function (DUF1524)
LMBEFIBJ_00457 4.7e-204 mntH P H( )-stimulated, divalent metal cation uptake system
LMBEFIBJ_00458 2.7e-259 EGP Major facilitator Superfamily
LMBEFIBJ_00459 1.4e-106 S AAA ATPase domain
LMBEFIBJ_00460 3e-173 S Psort location Cytoplasmic, score 7.50
LMBEFIBJ_00461 2e-44 V efflux transmembrane transporter activity
LMBEFIBJ_00462 3e-153 L Transposase and inactivated derivatives IS30 family
LMBEFIBJ_00463 1.2e-89 L Phage integrase family
LMBEFIBJ_00464 4.3e-19
LMBEFIBJ_00465 9.6e-22
LMBEFIBJ_00466 2.2e-12 L Phage integrase family
LMBEFIBJ_00468 1.2e-20
LMBEFIBJ_00469 7.3e-78
LMBEFIBJ_00470 3.8e-123
LMBEFIBJ_00471 3.6e-20 S Protein of unknown function (DUF2599)
LMBEFIBJ_00473 1.1e-247 L Phage integrase family
LMBEFIBJ_00474 0.0 G Glycosyl hydrolase family 20, domain 2
LMBEFIBJ_00475 3.5e-152 U Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00476 9.3e-141 U Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00477 9.1e-167 G Bacterial extracellular solute-binding protein
LMBEFIBJ_00478 1.8e-95 K Bacterial regulatory proteins, luxR family
LMBEFIBJ_00479 1.4e-194 T Histidine kinase
LMBEFIBJ_00480 2.6e-40
LMBEFIBJ_00481 6.1e-67
LMBEFIBJ_00482 5.1e-225 V Efflux ABC transporter, permease protein
LMBEFIBJ_00483 1.6e-138 V ABC transporter
LMBEFIBJ_00484 2.4e-99 3.4.21.83 E Prolyl oligopeptidase family
LMBEFIBJ_00486 3.4e-97 KLT Protein kinase domain
LMBEFIBJ_00487 1.9e-74 K Bacterial regulatory proteins, luxR family
LMBEFIBJ_00488 2.5e-51 T Histidine kinase
LMBEFIBJ_00489 1.6e-77 V FtsX-like permease family
LMBEFIBJ_00490 3.3e-79 V ABC transporter
LMBEFIBJ_00491 2.2e-294 V ABC transporter transmembrane region
LMBEFIBJ_00492 4.1e-69 S Transglutaminase-like superfamily
LMBEFIBJ_00493 2.1e-34 E Asparagine synthase
LMBEFIBJ_00494 2e-294 E Asparagine synthase
LMBEFIBJ_00495 1.4e-17
LMBEFIBJ_00496 2.5e-121 V ABC transporter
LMBEFIBJ_00497 2.5e-124 K helix_turn_helix, Lux Regulon
LMBEFIBJ_00498 3.1e-232 T Histidine kinase
LMBEFIBJ_00499 3e-17 U Type IV secretory system Conjugative DNA transfer
LMBEFIBJ_00502 8.3e-123 V ABC transporter
LMBEFIBJ_00504 4.4e-60 L Phage integrase family
LMBEFIBJ_00506 4.5e-126 2.6.1.1 E Aminotransferase
LMBEFIBJ_00507 5.4e-72
LMBEFIBJ_00508 7.3e-154 F ATP-grasp domain
LMBEFIBJ_00509 8.1e-78 G MFS/sugar transport protein
LMBEFIBJ_00510 1.6e-94 F ATP-grasp domain
LMBEFIBJ_00511 6.7e-88 6.3.5.5 HJ Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase)
LMBEFIBJ_00512 4.6e-268 L PFAM Integrase catalytic
LMBEFIBJ_00513 1.7e-171 L Phage integrase family
LMBEFIBJ_00514 1.7e-56 2.7.13.3 T Histidine kinase
LMBEFIBJ_00515 6.3e-61 K helix_turn_helix, Lux Regulon
LMBEFIBJ_00516 2.3e-69 trsE U type IV secretory pathway VirB4
LMBEFIBJ_00517 8.6e-63 S PrgI family protein
LMBEFIBJ_00518 2e-136
LMBEFIBJ_00519 1.1e-30
LMBEFIBJ_00520 6.4e-37
LMBEFIBJ_00521 3.5e-97 K transcriptional regulator
LMBEFIBJ_00522 3.9e-232 qseC 2.7.13.3 T GHKL domain
LMBEFIBJ_00523 4.6e-120 K Transcriptional regulatory protein, C terminal
LMBEFIBJ_00524 2.9e-48
LMBEFIBJ_00525 1.1e-119
LMBEFIBJ_00526 2.2e-188 V Putative peptidoglycan binding domain
LMBEFIBJ_00527 1e-133 ytrE V ABC transporter
LMBEFIBJ_00528 1.6e-194
LMBEFIBJ_00529 2.7e-97 lacR K Transcriptional regulator, LacI family
LMBEFIBJ_00530 3e-119 V ATPases associated with a variety of cellular activities
LMBEFIBJ_00531 2.2e-99
LMBEFIBJ_00532 6.8e-81
LMBEFIBJ_00534 3.2e-18 V Lanthionine synthetase C-like protein
LMBEFIBJ_00535 9.6e-41 V ATPase activity
LMBEFIBJ_00536 1.6e-43 V ABC-2 type transporter
LMBEFIBJ_00537 0.0 sprF 4.6.1.1 M Cell surface antigen C-terminus
LMBEFIBJ_00539 7.8e-126 K Helix-turn-helix domain protein
LMBEFIBJ_00540 5.2e-27
LMBEFIBJ_00541 8.1e-65
LMBEFIBJ_00542 1.7e-35
LMBEFIBJ_00543 3.5e-103 parA D AAA domain
LMBEFIBJ_00544 8e-83 S Transcription factor WhiB
LMBEFIBJ_00545 8.7e-234 S Helix-turn-helix domain
LMBEFIBJ_00546 2.2e-21
LMBEFIBJ_00547 4.5e-11
LMBEFIBJ_00549 3.2e-158 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
LMBEFIBJ_00550 4e-200 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
LMBEFIBJ_00553 4.2e-258 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
LMBEFIBJ_00554 2.1e-200 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
LMBEFIBJ_00555 1e-178 3.4.14.13 M Glycosyltransferase like family 2
LMBEFIBJ_00556 5.3e-266 S AI-2E family transporter
LMBEFIBJ_00557 1.1e-231 epsG M Glycosyl transferase family 21
LMBEFIBJ_00558 6.1e-147 natA V ATPases associated with a variety of cellular activities
LMBEFIBJ_00559 2.5e-300
LMBEFIBJ_00560 1.2e-256 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
LMBEFIBJ_00561 2.5e-214 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
LMBEFIBJ_00562 1.2e-95 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
LMBEFIBJ_00563 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LMBEFIBJ_00564 5.1e-98 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
LMBEFIBJ_00565 4.8e-157 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LMBEFIBJ_00566 2.4e-267 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LMBEFIBJ_00567 9.4e-92 S Protein of unknown function (DUF3180)
LMBEFIBJ_00568 3.3e-169 tesB I Thioesterase-like superfamily
LMBEFIBJ_00569 0.0 yjjK S ATP-binding cassette protein, ChvD family
LMBEFIBJ_00571 1.4e-24 L Transposase, Mutator family
LMBEFIBJ_00572 1.5e-206 EGP Major facilitator Superfamily
LMBEFIBJ_00574 5.4e-50
LMBEFIBJ_00575 1.1e-94 V ATPases associated with a variety of cellular activities
LMBEFIBJ_00576 7.7e-263 V FtsX-like permease family
LMBEFIBJ_00577 2.9e-60 K Virulence activator alpha C-term
LMBEFIBJ_00578 8.2e-200 tnp3512a L Transposase
LMBEFIBJ_00579 2.1e-292 EGP Major Facilitator Superfamily
LMBEFIBJ_00581 1.9e-175 glkA 2.7.1.2 G ROK family
LMBEFIBJ_00582 1.6e-36 EGP Major facilitator superfamily
LMBEFIBJ_00583 9.5e-09 EGP Major facilitator superfamily
LMBEFIBJ_00584 2.5e-163 dkgB S Oxidoreductase, aldo keto reductase family protein
LMBEFIBJ_00585 8.9e-69 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
LMBEFIBJ_00586 2.5e-144
LMBEFIBJ_00587 1.7e-21 EGP Major facilitator Superfamily
LMBEFIBJ_00588 4.1e-23 EGP Major Facilitator Superfamily
LMBEFIBJ_00589 2.4e-68 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
LMBEFIBJ_00591 1.3e-36 rpmE J Binds the 23S rRNA
LMBEFIBJ_00592 5.3e-190 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LMBEFIBJ_00593 8.5e-146 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
LMBEFIBJ_00594 3.6e-200 livK E Receptor family ligand binding region
LMBEFIBJ_00595 1.2e-105 U Belongs to the binding-protein-dependent transport system permease family
LMBEFIBJ_00596 7.2e-171 livM U Belongs to the binding-protein-dependent transport system permease family
LMBEFIBJ_00597 3.1e-153 E Branched-chain amino acid ATP-binding cassette transporter
LMBEFIBJ_00598 1.5e-121 livF E ATPases associated with a variety of cellular activities
LMBEFIBJ_00599 1.5e-118 ywlC 2.7.7.87 J Belongs to the SUA5 family
LMBEFIBJ_00600 1.3e-203 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
LMBEFIBJ_00601 4.9e-290 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
LMBEFIBJ_00602 2.7e-117 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
LMBEFIBJ_00603 4.4e-269 recD2 3.6.4.12 L PIF1-like helicase
LMBEFIBJ_00604 1.6e-35 S AMMECR1
LMBEFIBJ_00605 9e-29 GT87 NU Tfp pilus assembly protein FimV
LMBEFIBJ_00606 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
LMBEFIBJ_00607 1.3e-51 L Single-strand binding protein family
LMBEFIBJ_00608 0.0 pepO 3.4.24.71 O Peptidase family M13
LMBEFIBJ_00609 1.1e-98 S Short repeat of unknown function (DUF308)
LMBEFIBJ_00610 1.3e-151 map 3.4.11.18 E Methionine aminopeptidase
LMBEFIBJ_00611 1.7e-248 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
LMBEFIBJ_00612 3.2e-144 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
LMBEFIBJ_00613 1.7e-212 K WYL domain
LMBEFIBJ_00614 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
LMBEFIBJ_00615 7.4e-80 S PFAM Uncharacterised protein family UPF0150
LMBEFIBJ_00616 1.1e-33
LMBEFIBJ_00617 2e-35 XK27_03610 K Acetyltransferase (GNAT) domain
LMBEFIBJ_00618 4.1e-84 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
LMBEFIBJ_00619 1.9e-197 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
LMBEFIBJ_00620 3.3e-233 aspB E Aminotransferase class-V
LMBEFIBJ_00621 2.9e-08 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
LMBEFIBJ_00622 3.1e-11 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
LMBEFIBJ_00623 2.4e-185 S Endonuclease/Exonuclease/phosphatase family
LMBEFIBJ_00625 1.3e-75 F Nucleoside 2-deoxyribosyltransferase
LMBEFIBJ_00626 0.0 fadD 6.2.1.3 I AMP-binding enzyme
LMBEFIBJ_00627 2.7e-91 ywrO 1.6.5.2 S Flavodoxin-like fold
LMBEFIBJ_00628 3.2e-233 S peptidyl-serine autophosphorylation
LMBEFIBJ_00629 1.3e-42 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LMBEFIBJ_00630 7.7e-255 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LMBEFIBJ_00631 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
LMBEFIBJ_00632 1.9e-143 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LMBEFIBJ_00633 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
LMBEFIBJ_00634 2.1e-100 L Resolvase, N terminal domain
LMBEFIBJ_00635 2.5e-186 L Helix-turn-helix domain
LMBEFIBJ_00636 6.1e-254 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
LMBEFIBJ_00637 1.9e-52 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
LMBEFIBJ_00638 3.6e-45 S Nucleotidyltransferase domain
LMBEFIBJ_00639 5.5e-68 S Nucleotidyltransferase substrate binding protein like
LMBEFIBJ_00640 1.5e-241 3.2.1.58 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
LMBEFIBJ_00641 4.6e-268 L PFAM Integrase catalytic
LMBEFIBJ_00642 1.9e-85 K Bacterial regulatory proteins, tetR family
LMBEFIBJ_00643 0.0 bglB 3.2.1.21 GH3 G Glycosyl hydrolase family 3 N-terminal domain protein
LMBEFIBJ_00644 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
LMBEFIBJ_00645 2.3e-162
LMBEFIBJ_00646 0.0 S Uncharacterised protein conserved in bacteria (DUF2194)
LMBEFIBJ_00647 1.8e-278 pelF GT4 M Domain of unknown function (DUF3492)
LMBEFIBJ_00648 5.2e-268 pelG S Putative exopolysaccharide Exporter (EPS-E)
LMBEFIBJ_00649 7.5e-306 cotH M CotH kinase protein
LMBEFIBJ_00650 1e-156 P VTC domain
LMBEFIBJ_00651 2.3e-111 S Domain of unknown function (DUF4956)
LMBEFIBJ_00652 0.0 yliE T Putative diguanylate phosphodiesterase
LMBEFIBJ_00653 0.0 V ABC transporter, ATP-binding protein
LMBEFIBJ_00654 0.0 V ABC transporter transmembrane region
LMBEFIBJ_00655 2.9e-137 rbsR K helix_turn _helix lactose operon repressor
LMBEFIBJ_00656 1.9e-164 rihB 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
LMBEFIBJ_00657 1.3e-183 EGP Major facilitator Superfamily
LMBEFIBJ_00658 1.1e-162 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LMBEFIBJ_00659 4.9e-174 lacR K Transcriptional regulator, LacI family
LMBEFIBJ_00660 6e-108 K FCD
LMBEFIBJ_00661 9.1e-143 L Domain of unknown function (DUF4862)
LMBEFIBJ_00662 2.9e-120 2.7.1.2 GK ROK family
LMBEFIBJ_00663 7.8e-115 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
LMBEFIBJ_00664 0.0 nanI 3.2.1.18 GH33 G BNR repeat-like domain
LMBEFIBJ_00665 2.3e-271 E Bacterial extracellular solute-binding proteins, family 5 Middle
LMBEFIBJ_00666 7.2e-167 oppB6 EP Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00667 0.0 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
LMBEFIBJ_00668 8.5e-143 oppF E ATPases associated with a variety of cellular activities
LMBEFIBJ_00669 3e-160 nanL 4.3.3.7 EM Dihydrodipicolinate synthetase family
LMBEFIBJ_00670 3.3e-241 malY 4.4.1.8 E Aminotransferase, class I II
LMBEFIBJ_00671 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LMBEFIBJ_00672 4.6e-53 U Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00673 1.8e-154 U Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00674 7.9e-197 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
LMBEFIBJ_00675 7.7e-157 I type I phosphodiesterase nucleotide pyrophosphatase
LMBEFIBJ_00676 2e-46 L Transposase, Mutator family
LMBEFIBJ_00677 1.1e-57 L PFAM Integrase catalytic
LMBEFIBJ_00678 9.1e-12 L Helix-turn-helix domain
LMBEFIBJ_00679 5.4e-172 uxuT G MFS/sugar transport protein
LMBEFIBJ_00680 3.7e-22 G MFS/sugar transport protein
LMBEFIBJ_00681 1.2e-47 G MFS/sugar transport protein
LMBEFIBJ_00682 6.7e-62 K Periplasmic binding proteins and sugar binding domain of LacI family
LMBEFIBJ_00683 1.8e-67 K Periplasmic binding proteins and sugar binding domain of LacI family
LMBEFIBJ_00684 3.6e-232 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LMBEFIBJ_00685 2e-233 rspA 4.2.1.8 M mandelate racemase muconate lactonizing
LMBEFIBJ_00686 9.2e-195 mtlD 1.1.1.17, 1.1.1.57 G Mannitol dehydrogenase C-terminal domain
LMBEFIBJ_00687 1.8e-177 uxaC 5.3.1.12 G Glucuronate isomerase
LMBEFIBJ_00688 3.5e-52 FG bis(5'-adenosyl)-triphosphatase activity
LMBEFIBJ_00689 3.5e-40 L Psort location Cytoplasmic, score 8.87
LMBEFIBJ_00690 3.9e-94 L Integrase core domain
LMBEFIBJ_00691 4.5e-35 L PFAM Integrase catalytic
LMBEFIBJ_00692 2.2e-87 L PFAM Integrase catalytic
LMBEFIBJ_00693 2.2e-121 L IstB-like ATP binding protein
LMBEFIBJ_00694 2.5e-58
LMBEFIBJ_00696 3.2e-17
LMBEFIBJ_00697 1.1e-31 L HTH-like domain
LMBEFIBJ_00698 2.1e-12 L HTH-like domain
LMBEFIBJ_00699 6.2e-42 hup L Belongs to the bacterial histone-like protein family
LMBEFIBJ_00700 0.0 S Lysylphosphatidylglycerol synthase TM region
LMBEFIBJ_00701 9.5e-280 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
LMBEFIBJ_00702 3.8e-290 S PGAP1-like protein
LMBEFIBJ_00703 4.7e-47
LMBEFIBJ_00704 1e-44
LMBEFIBJ_00705 6.8e-163 S von Willebrand factor (vWF) type A domain
LMBEFIBJ_00706 1.1e-184 S von Willebrand factor (vWF) type A domain
LMBEFIBJ_00707 5.4e-90
LMBEFIBJ_00708 4.1e-170 S Protein of unknown function DUF58
LMBEFIBJ_00709 9.6e-192 moxR S ATPase family associated with various cellular activities (AAA)
LMBEFIBJ_00710 3.2e-132 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LMBEFIBJ_00711 5.7e-73 S LytR cell envelope-related transcriptional attenuator
LMBEFIBJ_00712 1.4e-37 K 'Cold-shock' DNA-binding domain
LMBEFIBJ_00713 4.7e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
LMBEFIBJ_00714 1.7e-34 S Proteins of 100 residues with WXG
LMBEFIBJ_00715 8.6e-66
LMBEFIBJ_00716 5.6e-133 KT Response regulator receiver domain protein
LMBEFIBJ_00717 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
LMBEFIBJ_00718 6.5e-66 cspB K 'Cold-shock' DNA-binding domain
LMBEFIBJ_00719 1.3e-162 S Protein of unknown function (DUF3027)
LMBEFIBJ_00720 2.8e-174 uspA T Belongs to the universal stress protein A family
LMBEFIBJ_00721 0.0 clpC O ATPase family associated with various cellular activities (AAA)
LMBEFIBJ_00722 0.0 3.1.3.5 F 5'-nucleotidase, C-terminal domain
LMBEFIBJ_00723 7.4e-203 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
LMBEFIBJ_00724 3e-262 hisS 6.1.1.21 J Histidyl-tRNA synthetase
LMBEFIBJ_00725 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
LMBEFIBJ_00726 7.9e-182 gmk 1.1.1.23, 2.7.4.8 S Protein of unknown function (DUF559)
LMBEFIBJ_00727 1.3e-21 2.7.13.3 T Histidine kinase
LMBEFIBJ_00728 1e-140 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
LMBEFIBJ_00729 4.4e-152 gluB ET Belongs to the bacterial solute-binding protein 3 family
LMBEFIBJ_00730 1.7e-106 gluC E Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00731 7.5e-184 gluD E Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00732 1.4e-281 phoN I PAP2 superfamily
LMBEFIBJ_00733 1.4e-179 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
LMBEFIBJ_00734 0.0 L DEAD DEAH box helicase
LMBEFIBJ_00735 6.7e-246 rarA L Recombination factor protein RarA
LMBEFIBJ_00736 2e-248 EGP Major facilitator Superfamily
LMBEFIBJ_00737 1.8e-184 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
LMBEFIBJ_00738 1.1e-63 J TM2 domain
LMBEFIBJ_00739 8.3e-55 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
LMBEFIBJ_00740 7.7e-46 yhbY J CRS1_YhbY
LMBEFIBJ_00741 0.0 ecfA GP ABC transporter, ATP-binding protein
LMBEFIBJ_00742 1.9e-102 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
LMBEFIBJ_00743 3.4e-199 S Glycosyltransferase, group 2 family protein
LMBEFIBJ_00744 3.6e-140 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
LMBEFIBJ_00745 1.9e-231 E Aminotransferase class I and II
LMBEFIBJ_00746 7.2e-139 bioM P ATPases associated with a variety of cellular activities
LMBEFIBJ_00747 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
LMBEFIBJ_00748 0.0 S Tetratricopeptide repeat
LMBEFIBJ_00749 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LMBEFIBJ_00750 4e-201 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
LMBEFIBJ_00751 0.0 G Glycosyl hydrolase family 20, domain 2
LMBEFIBJ_00752 3.9e-126 ybbM V Uncharacterised protein family (UPF0014)
LMBEFIBJ_00753 1.8e-112 ybbL V ATPases associated with a variety of cellular activities
LMBEFIBJ_00754 4e-104 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LMBEFIBJ_00755 2.7e-76 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LMBEFIBJ_00756 1e-238 carA 6.3.5.5 F Belongs to the CarA family
LMBEFIBJ_00757 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
LMBEFIBJ_00758 5.3e-167 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
LMBEFIBJ_00759 1.7e-102 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
LMBEFIBJ_00761 4.3e-132 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
LMBEFIBJ_00762 0.0 tetP J Elongation factor G, domain IV
LMBEFIBJ_00763 1.2e-117 ypfH S Phospholipase/Carboxylesterase
LMBEFIBJ_00764 6.4e-98 papP E Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00765 6.8e-111 glnP E Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00766 4.1e-115 glnQ 3.6.3.21 E ATP binding protein of ABC transporter for glutamate aspartate K02028
LMBEFIBJ_00767 3.8e-125 cjaA ET Bacterial periplasmic substrate-binding proteins
LMBEFIBJ_00768 4.9e-224 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
LMBEFIBJ_00769 2.5e-42 XAC3035 O Glutaredoxin
LMBEFIBJ_00770 3.1e-155 E Glyoxalase-like domain
LMBEFIBJ_00771 5e-145 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LMBEFIBJ_00772 1.9e-200 4.1.1.37 H Uroporphyrinogen decarboxylase (URO-D)
LMBEFIBJ_00773 7.6e-219 E Receptor family ligand binding region
LMBEFIBJ_00774 0.0 E Branched-chain amino acid transport system / permease component
LMBEFIBJ_00775 0.0 E ATPases associated with a variety of cellular activities
LMBEFIBJ_00776 3.2e-228 S Peptidase dimerisation domain
LMBEFIBJ_00777 1.1e-239 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
LMBEFIBJ_00778 1.4e-34 XAC3035 O Glutaredoxin
LMBEFIBJ_00779 1.9e-138 3.6.3.21 E ATPases associated with a variety of cellular activities
LMBEFIBJ_00780 4.8e-135 tcyA ET Bacterial periplasmic substrate-binding proteins
LMBEFIBJ_00781 4.3e-110 E Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00782 3.5e-110 XK27_08050 O prohibitin homologues
LMBEFIBJ_00783 4.6e-90 L Transposase and inactivated derivatives IS30 family
LMBEFIBJ_00784 1.7e-63 V ABC transporter
LMBEFIBJ_00786 4.8e-154 S Patatin-like phospholipase
LMBEFIBJ_00787 7.2e-144 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
LMBEFIBJ_00788 2e-163 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
LMBEFIBJ_00789 4.8e-126 S Vitamin K epoxide reductase
LMBEFIBJ_00790 1.2e-168 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
LMBEFIBJ_00791 1.2e-32 S Protein of unknown function (DUF3107)
LMBEFIBJ_00792 1.7e-288 mphA S Aminoglycoside phosphotransferase
LMBEFIBJ_00793 1.8e-287 uvrD2 3.6.4.12 L DNA helicase
LMBEFIBJ_00794 0.0 S Zincin-like metallopeptidase
LMBEFIBJ_00795 1.1e-158 lon T Belongs to the peptidase S16 family
LMBEFIBJ_00796 2e-44 S Protein of unknown function (DUF3052)
LMBEFIBJ_00798 2e-228 2.7.11.1 NU Tfp pilus assembly protein FimV
LMBEFIBJ_00799 2.6e-214 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
LMBEFIBJ_00800 4.8e-232 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
LMBEFIBJ_00801 5.8e-284 I acetylesterase activity
LMBEFIBJ_00802 1.3e-112 recO L Involved in DNA repair and RecF pathway recombination
LMBEFIBJ_00803 5.8e-154 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LMBEFIBJ_00804 1.5e-206 iunH1 3.2.2.1 F nucleoside hydrolase
LMBEFIBJ_00805 7.8e-202 P NMT1/THI5 like
LMBEFIBJ_00806 5.8e-138 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00807 5.6e-302 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
LMBEFIBJ_00808 6.2e-241 lacY P LacY proton/sugar symporter
LMBEFIBJ_00809 1e-190 K helix_turn _helix lactose operon repressor
LMBEFIBJ_00810 6.2e-247 O SERine Proteinase INhibitors
LMBEFIBJ_00811 4.4e-63 2.7.13.3 T Histidine kinase
LMBEFIBJ_00812 3.6e-61 S Thiamine-binding protein
LMBEFIBJ_00813 3e-145 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
LMBEFIBJ_00814 1.5e-230 O AAA domain (Cdc48 subfamily)
LMBEFIBJ_00815 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
LMBEFIBJ_00816 1.6e-166 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
LMBEFIBJ_00817 8.2e-295 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
LMBEFIBJ_00818 5.1e-237 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LMBEFIBJ_00819 3e-186 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LMBEFIBJ_00820 1.7e-79 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
LMBEFIBJ_00821 5.5e-44 yggT S YGGT family
LMBEFIBJ_00822 3.2e-38 3.1.21.3 V DivIVA protein
LMBEFIBJ_00823 8.3e-91 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LMBEFIBJ_00824 1.3e-179 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
LMBEFIBJ_00825 4.8e-125 S Virulence factor BrkB
LMBEFIBJ_00826 1.1e-160 K WYL domain
LMBEFIBJ_00827 7.7e-163 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
LMBEFIBJ_00828 1.1e-166 addB 3.6.4.12 L PD-(D/E)XK nuclease superfamily
LMBEFIBJ_00829 6.7e-278 recB 3.1.11.5, 3.1.12.1, 3.6.4.12 L PD-(D/E)XK nuclease superfamily
LMBEFIBJ_00830 1.1e-10 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LMBEFIBJ_00833 5.4e-286 S Protein of unknown function DUF262
LMBEFIBJ_00834 8.9e-200 S Protein of unknown function DUF262
LMBEFIBJ_00835 1.3e-49
LMBEFIBJ_00836 9.9e-50 L Transposase
LMBEFIBJ_00837 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
LMBEFIBJ_00838 1.2e-74 yneG S Domain of unknown function (DUF4186)
LMBEFIBJ_00839 0.0 4.2.1.53 S MCRA family
LMBEFIBJ_00840 1.3e-31 S Unextendable partial coding region
LMBEFIBJ_00841 2e-157 yvgN 1.1.1.346 S Aldo/keto reductase family
LMBEFIBJ_00842 1e-281 2.7.1.17 GH19 G FGGY family of carbohydrate kinases, N-terminal domain
LMBEFIBJ_00843 1.4e-41 acyP 3.6.1.7 C Acylphosphatase
LMBEFIBJ_00844 1.6e-255 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LMBEFIBJ_00845 1.8e-220 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LMBEFIBJ_00846 6e-111 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
LMBEFIBJ_00847 5e-97
LMBEFIBJ_00848 2e-120 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LMBEFIBJ_00849 6.3e-131 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
LMBEFIBJ_00850 1.5e-20 S Uncharacterized protein conserved in bacteria (DUF2252)
LMBEFIBJ_00851 8.9e-264 glnA2 6.3.1.2 E glutamine synthetase
LMBEFIBJ_00852 6.8e-186 EGP Major facilitator Superfamily
LMBEFIBJ_00853 1.9e-132 appC EP Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00854 2.1e-177 EP Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00855 0.0 E Bacterial extracellular solute-binding proteins, family 5 Middle
LMBEFIBJ_00856 5.1e-309 P Belongs to the ABC transporter superfamily
LMBEFIBJ_00857 2.9e-171 M Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
LMBEFIBJ_00858 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
LMBEFIBJ_00859 4.9e-122 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
LMBEFIBJ_00860 5.3e-273 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LMBEFIBJ_00861 3e-176 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
LMBEFIBJ_00862 6.7e-157 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LMBEFIBJ_00863 1e-128 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LMBEFIBJ_00864 1e-35 M Lysin motif
LMBEFIBJ_00865 2.6e-49 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LMBEFIBJ_00866 2.7e-227 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
LMBEFIBJ_00867 0.0 L DNA helicase
LMBEFIBJ_00868 5.5e-92 mraZ K Belongs to the MraZ family
LMBEFIBJ_00869 1.6e-194 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
LMBEFIBJ_00870 3.7e-73 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
LMBEFIBJ_00871 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
LMBEFIBJ_00872 1.6e-152 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LMBEFIBJ_00873 1.3e-247 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
LMBEFIBJ_00874 8e-202 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LMBEFIBJ_00875 2.1e-271 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LMBEFIBJ_00876 6.3e-224 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
LMBEFIBJ_00877 1.4e-220 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LMBEFIBJ_00878 2.1e-285 murC 6.3.2.8 M Belongs to the MurCDEF family
LMBEFIBJ_00879 2.3e-182 ftsQ 6.3.2.4 D Cell division protein FtsQ
LMBEFIBJ_00880 4.1e-15
LMBEFIBJ_00881 3.4e-43 tnp7109-21 L Integrase core domain
LMBEFIBJ_00882 2.2e-109 V ATPases associated with a variety of cellular activities
LMBEFIBJ_00883 1.2e-81 V ABC-2 family transporter protein
LMBEFIBJ_00884 3.7e-76 L Transposase and inactivated derivatives IS30 family
LMBEFIBJ_00885 3.9e-44 K Addiction module
LMBEFIBJ_00886 1e-47
LMBEFIBJ_00887 1.7e-87 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
LMBEFIBJ_00888 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
LMBEFIBJ_00890 2.4e-255 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
LMBEFIBJ_00891 2.5e-171 dppB EP Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00892 6.8e-175 dppC EP Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00893 5.8e-300 P Belongs to the ABC transporter superfamily
LMBEFIBJ_00894 3.6e-165 K helix_turn _helix lactose operon repressor
LMBEFIBJ_00895 1.8e-234 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
LMBEFIBJ_00896 2.6e-252 S Metal-independent alpha-mannosidase (GH125)
LMBEFIBJ_00897 8e-168 2.7.1.4 G pfkB family carbohydrate kinase
LMBEFIBJ_00898 9.4e-220 GK ROK family
LMBEFIBJ_00899 8.8e-162 2.7.1.2 GK ROK family
LMBEFIBJ_00900 3.7e-202 GK ROK family
LMBEFIBJ_00901 8.1e-151 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
LMBEFIBJ_00902 2.9e-235 nagA 3.5.1.25 G Amidohydrolase family
LMBEFIBJ_00903 7.4e-194 G Bacterial extracellular solute-binding protein
LMBEFIBJ_00904 1.2e-105 U Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00905 7.9e-126 G Binding-protein-dependent transport systems inner membrane component
LMBEFIBJ_00907 2.7e-75 3.6.1.55 F NUDIX domain
LMBEFIBJ_00908 3.4e-302 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
LMBEFIBJ_00909 4.4e-159 K Psort location Cytoplasmic, score
LMBEFIBJ_00910 2.6e-286 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
LMBEFIBJ_00911 0.0 smc D Required for chromosome condensation and partitioning
LMBEFIBJ_00912 2.8e-190 V Acetyltransferase (GNAT) domain
LMBEFIBJ_00913 4.6e-296 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LMBEFIBJ_00914 1.2e-132 sigH K Belongs to the sigma-70 factor family. ECF subfamily
LMBEFIBJ_00915 1.6e-54
LMBEFIBJ_00916 1.3e-187 galM 5.1.3.3 G Aldose 1-epimerase
LMBEFIBJ_00917 1.1e-191 galM 5.1.3.3 G Aldose 1-epimerase
LMBEFIBJ_00918 3.3e-178 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
LMBEFIBJ_00919 4.2e-89 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LMBEFIBJ_00920 4.4e-197 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
LMBEFIBJ_00921 2.5e-135 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
LMBEFIBJ_00922 2e-80 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LMBEFIBJ_00923 4.3e-26 rpmI J Ribosomal protein L35
LMBEFIBJ_00924 1.3e-61 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LMBEFIBJ_00925 1.5e-169 xerD D recombinase XerD
LMBEFIBJ_00926 8.1e-150 soj D CobQ CobB MinD ParA nucleotide binding domain protein
LMBEFIBJ_00927 1.9e-156 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
LMBEFIBJ_00928 1.8e-114 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LMBEFIBJ_00929 4.7e-154 nrtR 3.6.1.55 F NUDIX hydrolase
LMBEFIBJ_00930 4.1e-250 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
LMBEFIBJ_00931 5.3e-303 nadB 1.3.5.4, 1.4.3.16, 2.4.2.19 H Catalyzes the oxidation of L-aspartate to iminoaspartate
LMBEFIBJ_00932 7.7e-163 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, N-terminal domain
LMBEFIBJ_00933 1.1e-215 iscS1 2.8.1.7 E Aminotransferase class-V
LMBEFIBJ_00934 0.0 typA T Elongation factor G C-terminus
LMBEFIBJ_00935 1.7e-11 EGP Major facilitator Superfamily
LMBEFIBJ_00936 2.9e-38 L PFAM Integrase catalytic
LMBEFIBJ_00937 5.7e-74
LMBEFIBJ_00938 4.3e-191 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
LMBEFIBJ_00939 3.8e-193 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
LMBEFIBJ_00940 2e-42
LMBEFIBJ_00941 3.5e-178 xerC D Belongs to the 'phage' integrase family. XerC subfamily
LMBEFIBJ_00942 1e-309 E ABC transporter, substrate-binding protein, family 5
LMBEFIBJ_00943 2.2e-152 dppB EP Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_00944 8.7e-171 dppC EP N-terminal TM domain of oligopeptide transport permease C
LMBEFIBJ_00945 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
LMBEFIBJ_00946 6.3e-170 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
LMBEFIBJ_00947 5.1e-148 S Protein of unknown function (DUF3710)
LMBEFIBJ_00948 7.3e-133 S Protein of unknown function (DUF3159)
LMBEFIBJ_00949 1.6e-241 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LMBEFIBJ_00950 2.2e-104
LMBEFIBJ_00951 0.0 ctpE P E1-E2 ATPase
LMBEFIBJ_00952 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LMBEFIBJ_00953 3e-57 relB L RelB antitoxin
LMBEFIBJ_00954 7.9e-85 S PIN domain
LMBEFIBJ_00955 0.0 S Protein of unknown function DUF262
LMBEFIBJ_00956 2.5e-118 E Psort location Cytoplasmic, score 8.87
LMBEFIBJ_00957 1.1e-124 ybhL S Belongs to the BI1 family
LMBEFIBJ_00958 9.1e-176 ydeD EG EamA-like transporter family
LMBEFIBJ_00959 3.8e-135 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
LMBEFIBJ_00960 4e-278 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LMBEFIBJ_00961 5.7e-183 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LMBEFIBJ_00962 3.5e-137 fic D Fic/DOC family
LMBEFIBJ_00963 0.0 ftsK D FtsK SpoIIIE family protein
LMBEFIBJ_00964 6.5e-119 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LMBEFIBJ_00965 3.1e-90 cinA 3.5.1.42 S Belongs to the CinA family
LMBEFIBJ_00966 1.1e-81 K Helix-turn-helix XRE-family like proteins
LMBEFIBJ_00967 2e-38 S Protein of unknown function (DUF3046)
LMBEFIBJ_00968 2.6e-198 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LMBEFIBJ_00969 2.1e-100 recX S Modulates RecA activity
LMBEFIBJ_00970 4.2e-113 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LMBEFIBJ_00971 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
LMBEFIBJ_00972 3.1e-65 E GDSL-like Lipase/Acylhydrolase family
LMBEFIBJ_00973 2.1e-175 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LMBEFIBJ_00974 5.5e-73
LMBEFIBJ_00975 1.7e-128 plsC2 2.3.1.51 I Phosphate acyltransferases
LMBEFIBJ_00976 0.0 pknL 2.7.11.1 KLT PASTA
LMBEFIBJ_00977 1.2e-189 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
LMBEFIBJ_00978 7.6e-123
LMBEFIBJ_00979 5.8e-189 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
LMBEFIBJ_00980 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
LMBEFIBJ_00981 1.9e-199 G Major Facilitator Superfamily
LMBEFIBJ_00982 5.8e-172 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LMBEFIBJ_00983 0.0 lhr L DEAD DEAH box helicase
LMBEFIBJ_00984 6.9e-123 KT RESPONSE REGULATOR receiver
LMBEFIBJ_00985 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
LMBEFIBJ_00986 8.1e-235 S Type I phosphodiesterase / nucleotide pyrophosphatase
LMBEFIBJ_00987 3.6e-178 S Protein of unknown function (DUF3071)
LMBEFIBJ_00988 5.1e-47 S Domain of unknown function (DUF4193)
LMBEFIBJ_00989 6.1e-82 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
LMBEFIBJ_00990 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LMBEFIBJ_00991 1.3e-93 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LMBEFIBJ_00992 1.5e-73
LMBEFIBJ_00994 3.5e-244 S HipA-like C-terminal domain
LMBEFIBJ_00995 3.2e-158 S Fic/DOC family
LMBEFIBJ_00997 1.1e-53 L transposase activity
LMBEFIBJ_00998 7.5e-40 L HTH-like domain
LMBEFIBJ_00999 2.6e-115 L PFAM Integrase catalytic
LMBEFIBJ_01000 3.9e-240 EGP Major facilitator Superfamily
LMBEFIBJ_01001 1.4e-33 D Filamentation induced by cAMP protein fic
LMBEFIBJ_01002 1.3e-202 L Transposase, Mutator family
LMBEFIBJ_01003 8.6e-11 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
LMBEFIBJ_01005 3.3e-26
LMBEFIBJ_01006 7.4e-146 fic D Fic/DOC family
LMBEFIBJ_01007 9.9e-263 L Phage integrase family
LMBEFIBJ_01008 5.9e-185 V Abi-like protein
LMBEFIBJ_01009 1.9e-15 V Abi-like protein
LMBEFIBJ_01010 1.6e-09
LMBEFIBJ_01011 2.3e-43 yxaM EGP Major Facilitator Superfamily
LMBEFIBJ_01012 2.6e-31 L Transposase
LMBEFIBJ_01014 5.1e-75 S Psort location Cytoplasmic, score
LMBEFIBJ_01015 2.2e-24 D COG COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
LMBEFIBJ_01017 9.6e-159 L Transposase and inactivated derivatives IS30 family
LMBEFIBJ_01018 1e-103 V ATPases associated with a variety of cellular activities
LMBEFIBJ_01019 8.1e-173
LMBEFIBJ_01020 1e-178 2.7.7.7 L Transposase, Mutator family
LMBEFIBJ_01021 1.3e-62 S ABC-2 family transporter protein
LMBEFIBJ_01022 5.6e-58 spaG S Lantibiotic protection ABC transporter permease subunit, MutG family
LMBEFIBJ_01023 3.9e-89
LMBEFIBJ_01024 1.7e-98 T Transcriptional regulatory protein, C terminal
LMBEFIBJ_01025 1.7e-118 T PhoQ Sensor
LMBEFIBJ_01026 4.3e-88
LMBEFIBJ_01027 1.7e-160 EG EamA-like transporter family
LMBEFIBJ_01028 2.7e-70 pdxH S Pfam:Pyridox_oxidase
LMBEFIBJ_01029 4.6e-241 L ribosomal rna small subunit methyltransferase
LMBEFIBJ_01030 3.6e-162 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
LMBEFIBJ_01031 6.3e-171 corA P CorA-like Mg2+ transporter protein
LMBEFIBJ_01032 3.2e-150 ET Bacterial periplasmic substrate-binding proteins
LMBEFIBJ_01033 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
LMBEFIBJ_01034 7e-58 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
LMBEFIBJ_01035 3.8e-246 comE S Competence protein
LMBEFIBJ_01036 1.7e-176 holA 2.7.7.7 L DNA polymerase III delta subunit
LMBEFIBJ_01037 4.8e-102 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
LMBEFIBJ_01038 3.4e-149 yeaZ 2.3.1.234 O Glycoprotease family
LMBEFIBJ_01039 1.9e-96 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
LMBEFIBJ_01040 2.2e-193 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LMBEFIBJ_01042 2.4e-119
LMBEFIBJ_01044 1.9e-157 S Putative amidase domain
LMBEFIBJ_01045 1.9e-139 L Transposase and inactivated derivatives IS30 family
LMBEFIBJ_01046 5.6e-167 K Transposase IS116 IS110 IS902
LMBEFIBJ_01048 8.6e-28 S radical SAM domain protein
LMBEFIBJ_01049 8.3e-45 2.1.1.255 AJ Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
LMBEFIBJ_01050 1.4e-99 spaT V ATPases associated with a variety of cellular activities
LMBEFIBJ_01051 1.3e-64 U Type IV secretory system Conjugative DNA transfer
LMBEFIBJ_01052 6.6e-21 xerH L Phage integrase family
LMBEFIBJ_01053 4.8e-11 2.7.11.1 S HipA-like C-terminal domain
LMBEFIBJ_01056 9.3e-56 S Fic/DOC family
LMBEFIBJ_01058 1.4e-20
LMBEFIBJ_01060 1e-69
LMBEFIBJ_01061 1.4e-174 L Transposase and inactivated derivatives IS30 family
LMBEFIBJ_01062 4e-48 L PFAM Relaxase mobilization nuclease family protein
LMBEFIBJ_01063 7.4e-200 V AAA domain, putative AbiEii toxin, Type IV TA system
LMBEFIBJ_01064 1.9e-142 S ABC-2 family transporter protein
LMBEFIBJ_01065 6.3e-138
LMBEFIBJ_01066 2e-59
LMBEFIBJ_01068 3.6e-238 T Histidine kinase
LMBEFIBJ_01069 1.2e-120 K helix_turn_helix, Lux Regulon
LMBEFIBJ_01072 1.1e-103 M Peptidase family M23
LMBEFIBJ_01073 4.9e-256 G ABC transporter substrate-binding protein
LMBEFIBJ_01074 8.7e-242 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
LMBEFIBJ_01075 5.3e-209 guaB 1.1.1.205 F IMP dehydrogenase family protein
LMBEFIBJ_01076 1.5e-70
LMBEFIBJ_01077 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
LMBEFIBJ_01078 1.3e-87 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LMBEFIBJ_01079 6e-141 rpsB J Belongs to the universal ribosomal protein uS2 family
LMBEFIBJ_01080 1.7e-138 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LMBEFIBJ_01081 1.9e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
LMBEFIBJ_01082 5.4e-90 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
LMBEFIBJ_01083 2.1e-169 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
LMBEFIBJ_01084 1.5e-222 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
LMBEFIBJ_01085 1.1e-74 3.5.1.124 S DJ-1/PfpI family
LMBEFIBJ_01086 6.1e-140 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
LMBEFIBJ_01087 2.1e-69 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LMBEFIBJ_01088 7.4e-294 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LMBEFIBJ_01089 9.7e-115 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
LMBEFIBJ_01090 1.5e-164 S Protein of unknown function (DUF979)
LMBEFIBJ_01091 3.6e-118 S Protein of unknown function (DUF969)
LMBEFIBJ_01092 1.6e-299 ybiT S ABC transporter
LMBEFIBJ_01093 4.1e-127 yueD S Enoyl-(Acyl carrier protein) reductase
LMBEFIBJ_01094 8.2e-162 2.1.1.72 S Protein conserved in bacteria
LMBEFIBJ_01095 3.1e-32 S Zincin-like metallopeptidase
LMBEFIBJ_01096 4.4e-32 G ATPases associated with a variety of cellular activities
LMBEFIBJ_01097 6.1e-26 XK26_04485 P Cobalt transport protein
LMBEFIBJ_01098 1.1e-17 XK27_08585 S Hypothetical bacterial integral membrane protein (Trep_Strep)
LMBEFIBJ_01099 1.8e-41 M Putative peptidoglycan binding domain
LMBEFIBJ_01100 3.9e-32 M Putative peptidoglycan binding domain
LMBEFIBJ_01102 1.1e-81 macB V ATPases associated with a variety of cellular activities
LMBEFIBJ_01103 3.1e-295 S Psort location Cytoplasmic, score 8.87
LMBEFIBJ_01104 2.4e-113 S Domain of unknown function (DUF4194)
LMBEFIBJ_01105 0.0 S Psort location Cytoplasmic, score 8.87
LMBEFIBJ_01106 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
LMBEFIBJ_01107 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
LMBEFIBJ_01108 1.9e-186 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
LMBEFIBJ_01109 1.4e-184 rapZ S Displays ATPase and GTPase activities
LMBEFIBJ_01110 1.2e-169 whiA K May be required for sporulation
LMBEFIBJ_01111 1.1e-220 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
LMBEFIBJ_01112 1.6e-143 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
LMBEFIBJ_01113 2.5e-34 secG U Preprotein translocase SecG subunit
LMBEFIBJ_01114 1.1e-175 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
LMBEFIBJ_01115 1.5e-160 S Sucrose-6F-phosphate phosphohydrolase
LMBEFIBJ_01116 3.8e-247 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
LMBEFIBJ_01117 1.1e-216 mepA_6 V MatE
LMBEFIBJ_01118 4.1e-216 brnQ U Component of the transport system for branched-chain amino acids
LMBEFIBJ_01119 5.7e-200 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LMBEFIBJ_01120 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
LMBEFIBJ_01121 6.7e-180 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
LMBEFIBJ_01122 9.8e-211 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
LMBEFIBJ_01123 8.4e-25 S Putative phage holin Dp-1
LMBEFIBJ_01124 1.4e-71 M Glycosyl hydrolases family 25
LMBEFIBJ_01125 6.4e-50
LMBEFIBJ_01126 7.7e-19
LMBEFIBJ_01127 1.1e-34 CP_0766 2.7.13.3 D nuclear chromosome segregation
LMBEFIBJ_01128 1.1e-127
LMBEFIBJ_01129 1.9e-52
LMBEFIBJ_01130 4e-66
LMBEFIBJ_01131 3.1e-204 S Phage-related minor tail protein
LMBEFIBJ_01132 9.2e-36
LMBEFIBJ_01133 3.9e-55
LMBEFIBJ_01135 7.3e-84
LMBEFIBJ_01136 3e-40
LMBEFIBJ_01137 5.2e-34
LMBEFIBJ_01138 4.2e-50
LMBEFIBJ_01139 1.9e-15
LMBEFIBJ_01141 3.2e-52 S Phage capsid family
LMBEFIBJ_01143 4.8e-73
LMBEFIBJ_01144 1.2e-96 S Phage portal protein, SPP1 Gp6-like
LMBEFIBJ_01145 5e-269 S Terminase
LMBEFIBJ_01146 4.5e-49
LMBEFIBJ_01147 6.7e-86 J tRNA 5'-leader removal
LMBEFIBJ_01148 1.7e-37
LMBEFIBJ_01149 1.6e-07
LMBEFIBJ_01154 0.0 T Bifunctional DNA primase/polymerase, N-terminal
LMBEFIBJ_01156 5.1e-40 L single-stranded DNA binding
LMBEFIBJ_01157 2.1e-164
LMBEFIBJ_01159 7e-20
LMBEFIBJ_01162 1.4e-49 rusA 3.1.22.4 L Endodeoxyribonuclease RusA
LMBEFIBJ_01167 7.3e-43 S P22_AR N-terminal domain
LMBEFIBJ_01170 1.5e-17
LMBEFIBJ_01171 2.3e-16
LMBEFIBJ_01172 4.4e-149 dcm 2.1.1.37 H Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
LMBEFIBJ_01173 2.6e-222 L Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
LMBEFIBJ_01175 4.8e-71
LMBEFIBJ_01176 2.4e-11 S Predicted membrane protein (DUF2335)
LMBEFIBJ_01178 9.3e-116 L Phage integrase family
LMBEFIBJ_01179 2.8e-156 G Fructosamine kinase
LMBEFIBJ_01180 1.4e-153 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
LMBEFIBJ_01181 1.1e-161 S PAC2 family
LMBEFIBJ_01187 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LMBEFIBJ_01188 7.7e-111 hit 2.7.7.53 FG HIT domain
LMBEFIBJ_01189 2e-111 yebC K transcriptional regulatory protein
LMBEFIBJ_01190 1.1e-96 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
LMBEFIBJ_01191 3.4e-88 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
LMBEFIBJ_01192 2.6e-189 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
LMBEFIBJ_01193 4.3e-37 yajC U Preprotein translocase subunit
LMBEFIBJ_01194 1.8e-88 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LMBEFIBJ_01195 5.4e-212 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
LMBEFIBJ_01196 5.9e-158 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LMBEFIBJ_01197 2.8e-236
LMBEFIBJ_01198 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
LMBEFIBJ_01199 2.6e-30
LMBEFIBJ_01200 4.6e-161 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
LMBEFIBJ_01201 7.7e-143 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
LMBEFIBJ_01202 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
LMBEFIBJ_01204 8.6e-206 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
LMBEFIBJ_01205 3.8e-295 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
LMBEFIBJ_01206 0.0 pafB K WYL domain
LMBEFIBJ_01207 1.5e-47
LMBEFIBJ_01208 0.0 helY L DEAD DEAH box helicase
LMBEFIBJ_01209 1.1e-61 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
LMBEFIBJ_01210 5e-136 pgp 3.1.3.18 S HAD-hyrolase-like
LMBEFIBJ_01211 6.3e-09
LMBEFIBJ_01213 3.4e-125 KL Superfamily II DNA RNA helicases, SNF2 family
LMBEFIBJ_01214 1.8e-08
LMBEFIBJ_01215 1.2e-189 L Psort location Cytoplasmic, score 8.87
LMBEFIBJ_01220 6.4e-95
LMBEFIBJ_01222 8.7e-15 S VRR_NUC
LMBEFIBJ_01226 1.5e-64
LMBEFIBJ_01229 1.1e-26 yopT S Fic/DOC family
LMBEFIBJ_01230 5e-111 D ftsk spoiiie
LMBEFIBJ_01232 3.3e-94 L Psort location Cytoplasmic, score 8.87
LMBEFIBJ_01233 8.4e-38 2.1.1.72 S Adenine-specific methyltransferase EcoRI
LMBEFIBJ_01237 5.5e-24 hutG 3.5.3.8 E N-formylglutamate amidohydrolase
LMBEFIBJ_01239 4e-77 L endonuclease I
LMBEFIBJ_01242 7.1e-42 usp 3.5.1.28 CBM50 S CHAP domain
LMBEFIBJ_01243 2e-45
LMBEFIBJ_01246 2.2e-57 NU Tfp pilus assembly protein FimV
LMBEFIBJ_01247 1.3e-09
LMBEFIBJ_01248 5.3e-34 V Pfam HNH endonuclease
LMBEFIBJ_01250 2.2e-08 S Protein of unknown function (DUF2815)
LMBEFIBJ_01253 5.8e-63 S N-methyltransferase activity
LMBEFIBJ_01258 1.5e-29 purL 1.17.4.1, 2.1.1.37, 6.3.5.3 L C-5 cytosine-specific DNA methylase
LMBEFIBJ_01259 5.5e-100 ydiP 2.1.1.37 H Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family
LMBEFIBJ_01263 2.3e-61 L Resolvase, N terminal domain
LMBEFIBJ_01264 9.3e-189 L Helix-turn-helix domain
LMBEFIBJ_01265 7.5e-29 K RNA polymerase II activating transcription factor binding
LMBEFIBJ_01266 4e-50 int L Phage integrase, N-terminal SAM-like domain
LMBEFIBJ_01267 3.7e-108 dprA LU DNA recombination-mediator protein A
LMBEFIBJ_01268 5.1e-73 comF S competence protein
LMBEFIBJ_01275 1.9e-18 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
LMBEFIBJ_01277 1.7e-76 L A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LMBEFIBJ_01279 3.7e-200 tnp3512a L Transposase
LMBEFIBJ_01280 9.6e-208 purL 1.17.4.1, 6.3.5.3 L intein-mediated protein splicing
LMBEFIBJ_01284 1.4e-27 flgJ S pathogenesis
LMBEFIBJ_01286 1.5e-28 ydhQ 2.7.11.1 MU cell adhesion
LMBEFIBJ_01287 9.1e-25 dnaN 2.7.7.7 L DNA-directed DNA polymerase activity
LMBEFIBJ_01288 9.2e-163 S COG0433 Predicted ATPase
LMBEFIBJ_01289 3.1e-50
LMBEFIBJ_01291 1.5e-40 D protein tyrosine kinase activity
LMBEFIBJ_01294 7.5e-71 addB 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
LMBEFIBJ_01295 9.8e-14
LMBEFIBJ_01297 2.9e-183 D ftsk spoiiie
LMBEFIBJ_01298 2.1e-52 D nuclear chromosome segregation
LMBEFIBJ_01299 1.7e-09 S Antitoxin component of a toxin-antitoxin (TA) module
LMBEFIBJ_01300 1.6e-249 U Spy0128-like isopeptide containing domain
LMBEFIBJ_01303 1.3e-58 S Bifunctional DNA primase/polymerase, N-terminal
LMBEFIBJ_01324 7.8e-13 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
LMBEFIBJ_01326 3.2e-18 secG U Preprotein translocase SecG subunit
LMBEFIBJ_01332 1.2e-16 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
LMBEFIBJ_01344 1.2e-61 M Sortase family
LMBEFIBJ_01351 6.2e-24
LMBEFIBJ_01354 4.9e-30 3.1.1.53 L Calcineurin-like phosphoesterase
LMBEFIBJ_01364 6.7e-71
LMBEFIBJ_01365 1.4e-12
LMBEFIBJ_01368 4.2e-26 yorS 3.1.3.5 S 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
LMBEFIBJ_01371 7.5e-119 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
LMBEFIBJ_01375 1.6e-64 L Transposase IS200 like
LMBEFIBJ_01376 5e-130 L Psort location Cytoplasmic, score 8.87
LMBEFIBJ_01387 5.3e-146 L Psort location Cytoplasmic, score 8.87
LMBEFIBJ_01391 2.4e-102
LMBEFIBJ_01392 1.4e-09 6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.5.5 HJ ligase activity
LMBEFIBJ_01395 3.1e-09 S Domain of unknown function (DUF3841)
LMBEFIBJ_01396 0.0 V Type II restriction enzyme, methylase subunits
LMBEFIBJ_01411 1e-29 K Helix-turn-helix domain
LMBEFIBJ_01412 6.4e-38 VY92_07350 S Phage derived protein Gp49-like (DUF891)
LMBEFIBJ_01417 2.9e-07
LMBEFIBJ_01420 3.4e-91 S N-methyltransferase activity
LMBEFIBJ_01423 1.7e-75 int L Phage integrase, N-terminal SAM-like domain
LMBEFIBJ_01424 6.4e-51 int L Phage integrase, N-terminal SAM-like domain
LMBEFIBJ_01425 5.9e-78 S N-methyltransferase activity
LMBEFIBJ_01426 2.6e-99 L Psort location Cytoplasmic, score 8.87
LMBEFIBJ_01429 8.2e-84 2.7.11.1 S HipA-like C-terminal domain
LMBEFIBJ_01431 3e-121 L Transposase and inactivated derivatives IS30 family
LMBEFIBJ_01433 1.9e-44 ytrE_1 3.6.3.21 V ABC transporter
LMBEFIBJ_01434 9.4e-23 V efflux transmembrane transporter activity
LMBEFIBJ_01435 5.6e-56
LMBEFIBJ_01436 5.8e-112 K helix_turn_helix, mercury resistance
LMBEFIBJ_01437 1.1e-74 garA T Inner membrane component of T3SS, cytoplasmic domain
LMBEFIBJ_01438 5e-140 S Bacterial protein of unknown function (DUF881)
LMBEFIBJ_01439 1.2e-28 sbp S Protein of unknown function (DUF1290)
LMBEFIBJ_01440 1.6e-124 S Bacterial protein of unknown function (DUF881)
LMBEFIBJ_01441 6e-106 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LMBEFIBJ_01442 1e-156 hisG 2.4.2.17 F ATP phosphoribosyltransferase
LMBEFIBJ_01443 9.9e-42 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
LMBEFIBJ_01444 7.7e-99 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
LMBEFIBJ_01445 3.4e-185 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LMBEFIBJ_01446 6.2e-157 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
LMBEFIBJ_01447 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
LMBEFIBJ_01448 2.3e-127 S SOS response associated peptidase (SRAP)
LMBEFIBJ_01449 4.8e-154 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
LMBEFIBJ_01450 1.9e-253 mmuP E amino acid
LMBEFIBJ_01451 7.3e-88 EGP Major facilitator Superfamily
LMBEFIBJ_01452 6e-188 V VanZ like family
LMBEFIBJ_01453 2.2e-50 cefD 5.1.1.17 E Aminotransferase, class V
LMBEFIBJ_01454 1.3e-90 MA20_25245 K FR47-like protein
LMBEFIBJ_01455 8.4e-27 S Uncharacterized protein conserved in bacteria (DUF2316)
LMBEFIBJ_01456 8e-99 S Acetyltransferase (GNAT) domain
LMBEFIBJ_01457 2.7e-33 L Transposase DDE domain
LMBEFIBJ_01458 0.0 E Sodium:solute symporter family
LMBEFIBJ_01459 6.8e-43
LMBEFIBJ_01460 2.8e-89 G transmembrane transporter activity
LMBEFIBJ_01461 2.5e-32 truD 5.4.99.27 J tRNA pseudouridine synthase D (TruD)
LMBEFIBJ_01462 7.6e-10 L Transposase DDE domain
LMBEFIBJ_01463 1.2e-46
LMBEFIBJ_01464 5.2e-121
LMBEFIBJ_01467 5.8e-35 2.7.13.3 T Histidine kinase
LMBEFIBJ_01468 2.5e-162 2.7.13.3 T Histidine kinase
LMBEFIBJ_01469 1.1e-47 K helix_turn_helix, Lux Regulon
LMBEFIBJ_01470 3e-95
LMBEFIBJ_01471 4e-143 M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
LMBEFIBJ_01472 1.4e-124 lolD Q ATPases associated with a variety of cellular activities
LMBEFIBJ_01473 1e-175 V MacB-like periplasmic core domain
LMBEFIBJ_01474 2.7e-39 relB L RelB antitoxin
LMBEFIBJ_01475 3.8e-50 S Bacterial toxin of type II toxin-antitoxin system, YafQ
LMBEFIBJ_01476 1.5e-34 2.7.13.3 T Histidine kinase
LMBEFIBJ_01477 8e-94 rpoE4 K Sigma-70 region 2
LMBEFIBJ_01478 9.1e-17 S Psort location CytoplasmicMembrane, score
LMBEFIBJ_01479 4.8e-95
LMBEFIBJ_01480 2.5e-125
LMBEFIBJ_01481 3.8e-162 yfiL V ATPases associated with a variety of cellular activities
LMBEFIBJ_01482 2e-70
LMBEFIBJ_01483 9.1e-62
LMBEFIBJ_01484 4.5e-147 S EamA-like transporter family
LMBEFIBJ_01485 1.9e-99
LMBEFIBJ_01486 5e-128
LMBEFIBJ_01487 4.1e-121 V ATPases associated with a variety of cellular activities
LMBEFIBJ_01488 4.3e-201 tnp3512a L Transposase
LMBEFIBJ_01489 1.2e-56 L Transposase and inactivated derivatives IS30 family
LMBEFIBJ_01490 4.7e-15 L Transposase and inactivated derivatives IS30 family
LMBEFIBJ_01491 5.2e-87 L Transposase and inactivated derivatives IS30 family
LMBEFIBJ_01492 2e-118 K Bacterial regulatory proteins, luxR family
LMBEFIBJ_01493 2.8e-224 T Histidine kinase
LMBEFIBJ_01494 9.2e-251 V Efflux ABC transporter, permease protein
LMBEFIBJ_01495 2.3e-162 V ABC transporter
LMBEFIBJ_01497 7.4e-49 S Protein of unknown function (DUF2089)
LMBEFIBJ_01498 5.3e-51
LMBEFIBJ_01499 5.5e-71 K Transcriptional regulator
LMBEFIBJ_01500 7.9e-109
LMBEFIBJ_01501 1e-31 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
LMBEFIBJ_01502 2.9e-116 XK27_07525 3.6.1.55 F Hydrolase of X-linked nucleoside diphosphate N terminal
LMBEFIBJ_01503 9.6e-94 yidC U Membrane protein insertase, YidC Oxa1 family
LMBEFIBJ_01505 1e-77 2.6.1.76 EGP Major Facilitator Superfamily
LMBEFIBJ_01506 8.8e-287 mmuP E amino acid
LMBEFIBJ_01508 5.7e-64 yeaO K Protein of unknown function, DUF488
LMBEFIBJ_01509 1.2e-46
LMBEFIBJ_01510 4.2e-19
LMBEFIBJ_01511 6.5e-156 3.6.4.12
LMBEFIBJ_01512 2.3e-16 yijF S Domain of unknown function (DUF1287)
LMBEFIBJ_01514 3.5e-41 S Fic/DOC family
LMBEFIBJ_01515 1.1e-11 IQ short chain dehydrogenase
LMBEFIBJ_01516 6.1e-45 yeaO K Protein of unknown function, DUF488
LMBEFIBJ_01517 2.9e-137 KL DEAD-like helicases superfamily
LMBEFIBJ_01518 8.3e-229 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
LMBEFIBJ_01519 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LMBEFIBJ_01520 3.3e-120 3.8.1.2 S Haloacid dehalogenase-like hydrolase
LMBEFIBJ_01521 3.3e-10 V ABC transporter transmembrane region
LMBEFIBJ_01522 3e-170 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
LMBEFIBJ_01523 3.5e-205 MA20_36090 S Psort location Cytoplasmic, score 8.87
LMBEFIBJ_01524 5.1e-24
LMBEFIBJ_01525 1.6e-123 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LMBEFIBJ_01526 8.9e-181 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
LMBEFIBJ_01527 4.5e-157 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
LMBEFIBJ_01528 9.4e-175 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
LMBEFIBJ_01529 6.9e-289 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
LMBEFIBJ_01530 1e-72 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
LMBEFIBJ_01531 5.9e-177 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
LMBEFIBJ_01532 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
LMBEFIBJ_01533 6.9e-186 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
LMBEFIBJ_01534 7.4e-155 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
LMBEFIBJ_01535 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LMBEFIBJ_01536 4.3e-95 sixA 3.6.1.55 T Phosphoglycerate mutase family
LMBEFIBJ_01537 2.7e-194 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
LMBEFIBJ_01538 1.3e-67 S Phospholipase/Carboxylesterase
LMBEFIBJ_01540 1.1e-130 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LMBEFIBJ_01541 1.6e-109 S phosphoesterase or phosphohydrolase
LMBEFIBJ_01542 2.5e-23 ydhF S Aldo/keto reductase family
LMBEFIBJ_01543 7.6e-12 ydhF S Aldo/keto reductase family
LMBEFIBJ_01544 2.9e-168 I alpha/beta hydrolase fold
LMBEFIBJ_01545 1.4e-177 CP_1020 S zinc ion binding
LMBEFIBJ_01546 2.3e-124 S Plasmid pRiA4b ORF-3-like protein
LMBEFIBJ_01547 5.9e-36 rarD S EamA-like transporter family
LMBEFIBJ_01548 1.7e-30 S zinc finger
LMBEFIBJ_01549 1.6e-206 L Uncharacterized conserved protein (DUF2075)
LMBEFIBJ_01550 3.1e-31 mazG S MazG-like family
LMBEFIBJ_01551 2e-12 2.5.1.19 S Belongs to the short-chain dehydrogenases reductases (SDR) family
LMBEFIBJ_01552 2.9e-63 CP_1020 S zinc finger
LMBEFIBJ_01553 2.3e-129
LMBEFIBJ_01554 8.8e-93 bcp 1.11.1.15 O Redoxin
LMBEFIBJ_01555 4.3e-39 L Transposase, Mutator family
LMBEFIBJ_01556 6.3e-49 L Transposase, Mutator family
LMBEFIBJ_01558 7.3e-155 S Sucrose-6F-phosphate phosphohydrolase
LMBEFIBJ_01559 7.1e-158 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
LMBEFIBJ_01560 1.2e-241 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
LMBEFIBJ_01561 1.1e-80
LMBEFIBJ_01562 0.0 S Glycosyl hydrolases related to GH101 family, GH129
LMBEFIBJ_01563 6.5e-309 E ABC transporter, substrate-binding protein, family 5
LMBEFIBJ_01564 1.7e-303 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
LMBEFIBJ_01565 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
LMBEFIBJ_01566 4.5e-178 K helix_turn _helix lactose operon repressor
LMBEFIBJ_01569 7.4e-134 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
LMBEFIBJ_01570 2.7e-179 hemN H Involved in the biosynthesis of porphyrin-containing compound
LMBEFIBJ_01571 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
LMBEFIBJ_01572 7.5e-34 rpsT J Binds directly to 16S ribosomal RNA
LMBEFIBJ_01573 1.7e-126 S UPF0126 domain
LMBEFIBJ_01574 5e-109 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
LMBEFIBJ_01575 5e-108 int L Phage integrase family
LMBEFIBJ_01576 4.6e-52 gepA S Protein of unknown function (DUF4065)
LMBEFIBJ_01577 9.5e-17
LMBEFIBJ_01580 4.1e-22
LMBEFIBJ_01581 1.4e-17
LMBEFIBJ_01586 1.6e-07 K BRO family, N-terminal domain
LMBEFIBJ_01589 2.2e-66 L PDDEXK-like domain of unknown function (DUF3799)
LMBEFIBJ_01592 1.8e-10 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
LMBEFIBJ_01593 4e-30 V HNH endonuclease
LMBEFIBJ_01596 2.1e-38
LMBEFIBJ_01598 5.6e-11
LMBEFIBJ_01601 2.2e-45
LMBEFIBJ_01610 5.3e-23
LMBEFIBJ_01615 5.1e-42
LMBEFIBJ_01616 1.6e-24
LMBEFIBJ_01617 3e-37
LMBEFIBJ_01618 1.8e-19 K BRO family, N-terminal domain
LMBEFIBJ_01619 2.5e-92 2.1.1.37 L C-5 cytosine-specific DNA methylase
LMBEFIBJ_01621 4e-31 2.1.1.37 L DNA (cytosine-5-)-methyltransferase activity
LMBEFIBJ_01622 2.3e-78 K BRO family, N-terminal domain
LMBEFIBJ_01625 3.1e-10 L Belongs to the 'phage' integrase family
LMBEFIBJ_01629 2e-23 comM O Magnesium chelatase, subunit ChlI C-terminal
LMBEFIBJ_01632 2.4e-49 T Toxic component of a toxin-antitoxin (TA) module
LMBEFIBJ_01633 5.7e-35 relB L RelB antitoxin
LMBEFIBJ_01642 1.6e-11 K Helix-turn-helix domain
LMBEFIBJ_01647 3.9e-22 V HNH endonuclease
LMBEFIBJ_01650 0.0 S Terminase
LMBEFIBJ_01651 2.8e-211
LMBEFIBJ_01652 1e-92
LMBEFIBJ_01654 1.6e-55
LMBEFIBJ_01655 4.8e-119 S Phage major capsid protein E
LMBEFIBJ_01656 6.8e-40
LMBEFIBJ_01657 1.6e-60
LMBEFIBJ_01660 6.8e-70
LMBEFIBJ_01663 5.3e-133 MA20_18055 DNT domain protein
LMBEFIBJ_01665 8e-178 ebh 2.1.1.80, 3.1.1.61 S cellulase activity
LMBEFIBJ_01669 3.7e-200 tnp3512a L Transposase
LMBEFIBJ_01672 9.7e-17
LMBEFIBJ_01673 2.6e-108 M Glycosyl hydrolases family 25
LMBEFIBJ_01674 1.8e-27 S Putative phage holin Dp-1
LMBEFIBJ_01675 1.6e-13
LMBEFIBJ_01676 3.1e-225 ilvE 2.6.1.42 E Amino-transferase class IV
LMBEFIBJ_01677 1.2e-82 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
LMBEFIBJ_01678 9.8e-194 S alpha beta
LMBEFIBJ_01679 4.6e-234 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
LMBEFIBJ_01680 1e-42 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
LMBEFIBJ_01681 5.5e-201 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
LMBEFIBJ_01682 0.0 fadD 6.2.1.3 I AMP-binding enzyme
LMBEFIBJ_01683 6.8e-182 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LMBEFIBJ_01684 1.4e-254 corC S CBS domain
LMBEFIBJ_01685 5.2e-101 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LMBEFIBJ_01686 3.3e-214 phoH T PhoH-like protein
LMBEFIBJ_01687 1.5e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
LMBEFIBJ_01688 4.2e-144 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
LMBEFIBJ_01690 1.4e-164 spoU 2.1.1.185 J SpoU rRNA Methylase family
LMBEFIBJ_01691 1.4e-239 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LMBEFIBJ_01692 1.6e-111 yitW S Iron-sulfur cluster assembly protein
LMBEFIBJ_01693 1.5e-100 iscU C SUF system FeS assembly protein, NifU family
LMBEFIBJ_01694 2.5e-239 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LMBEFIBJ_01695 9.2e-144 sufC O FeS assembly ATPase SufC
LMBEFIBJ_01696 7.3e-236 sufD O FeS assembly protein SufD
LMBEFIBJ_01697 1.1e-291 sufB O FeS assembly protein SufB
LMBEFIBJ_01698 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
LMBEFIBJ_01699 7e-80 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
LMBEFIBJ_01700 0.0 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
LMBEFIBJ_01701 3.8e-218 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
LMBEFIBJ_01702 2.6e-77 3.4.23.43 S Type IV leader peptidase family
LMBEFIBJ_01703 6.1e-200 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LMBEFIBJ_01704 5.1e-78 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LMBEFIBJ_01705 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LMBEFIBJ_01706 2.1e-35
LMBEFIBJ_01707 2.6e-62 WQ51_05790 S Bacterial protein of unknown function (DUF948)
LMBEFIBJ_01708 1.2e-128 pgm3 G Phosphoglycerate mutase family
LMBEFIBJ_01709 1.2e-48 relB L RelB antitoxin
LMBEFIBJ_01710 3e-65 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
LMBEFIBJ_01711 1.6e-111 E Transglutaminase-like superfamily
LMBEFIBJ_01712 3.8e-44 sdpI S SdpI/YhfL protein family
LMBEFIBJ_01713 4e-80 3.5.4.5 F cytidine deaminase activity
LMBEFIBJ_01714 1.4e-152 S Peptidase C26
LMBEFIBJ_01715 4.5e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LMBEFIBJ_01716 4.4e-135 lolD V ABC transporter
LMBEFIBJ_01717 2.8e-216 V FtsX-like permease family
LMBEFIBJ_01718 3.7e-64 S Domain of unknown function (DUF4418)
LMBEFIBJ_01719 0.0 pcrA 3.6.4.12 L DNA helicase
LMBEFIBJ_01720 4.8e-105 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
LMBEFIBJ_01721 1.8e-240 pbuX F Permease family
LMBEFIBJ_01722 2.4e-30 yozG K Cro/C1-type HTH DNA-binding domain
LMBEFIBJ_01723 2.7e-166 M pfam nlp p60
LMBEFIBJ_01724 1e-66 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LMBEFIBJ_01725 1.6e-106 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
LMBEFIBJ_01726 1.5e-109 3.4.13.21 E Peptidase family S51
LMBEFIBJ_01727 1.9e-196
LMBEFIBJ_01728 2.5e-49 E lipolytic protein G-D-S-L family
LMBEFIBJ_01729 3.9e-29 E GDSL-like Lipase/Acylhydrolase family
LMBEFIBJ_01730 1.8e-90 K Helix-turn-helix domain
LMBEFIBJ_01731 2.7e-103 S PIN domain
LMBEFIBJ_01732 1.1e-283 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
LMBEFIBJ_01733 6.7e-249 V ABC-2 family transporter protein
LMBEFIBJ_01734 1.7e-224 V ABC-2 family transporter protein
LMBEFIBJ_01735 2.9e-187 V ATPases associated with a variety of cellular activities
LMBEFIBJ_01736 1.2e-09 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
LMBEFIBJ_01737 8.6e-214 T Histidine kinase
LMBEFIBJ_01738 1.2e-101 K helix_turn_helix, Lux Regulon
LMBEFIBJ_01739 2.1e-114 MA20_27875 P Protein of unknown function DUF47
LMBEFIBJ_01740 3.1e-187 pit P Phosphate transporter family
LMBEFIBJ_01741 9.9e-260 nplT G Alpha amylase, catalytic domain
LMBEFIBJ_01742 2.1e-33 EGP Major Facilitator Superfamily
LMBEFIBJ_01743 3.9e-29 EGP Major Facilitator Superfamily
LMBEFIBJ_01744 0.0 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
LMBEFIBJ_01746 1.9e-231 rutG F Permease family
LMBEFIBJ_01747 3e-161 3.1.3.73 G Phosphoglycerate mutase family
LMBEFIBJ_01748 1.3e-105 3.1.3.27 E haloacid dehalogenase-like hydrolase
LMBEFIBJ_01749 3.4e-234 EGP Major facilitator Superfamily
LMBEFIBJ_01751 2.2e-60 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LMBEFIBJ_01752 1.5e-131 S Sulfite exporter TauE/SafE
LMBEFIBJ_01753 2.9e-17
LMBEFIBJ_01755 1.1e-34 feoA P FeoA
LMBEFIBJ_01756 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
LMBEFIBJ_01757 2.2e-11
LMBEFIBJ_01758 4.4e-17 yccF S Inner membrane component domain
LMBEFIBJ_01759 1.2e-11 S Putative phage holin Dp-1
LMBEFIBJ_01760 4.6e-104 M Glycosyl hydrolases family 25
LMBEFIBJ_01762 3.1e-14
LMBEFIBJ_01764 2.1e-26 S Terminase
LMBEFIBJ_01765 1.8e-07
LMBEFIBJ_01766 2.2e-38 V HNH nucleases
LMBEFIBJ_01769 8.4e-15
LMBEFIBJ_01770 1.6e-205 L Transposase and inactivated derivatives IS30 family
LMBEFIBJ_01771 4.1e-281 S ATPases associated with a variety of cellular activities
LMBEFIBJ_01772 3.4e-94 K FR47-like protein
LMBEFIBJ_01773 1.3e-119 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
LMBEFIBJ_01774 0.0 XK27_00515 D Cell surface antigen C-terminus
LMBEFIBJ_01776 1.4e-38
LMBEFIBJ_01777 6.2e-146
LMBEFIBJ_01778 8.6e-31 S PrgI family protein
LMBEFIBJ_01779 6.2e-278 L PFAM Integrase catalytic
LMBEFIBJ_01780 1.1e-77 int L Phage integrase, N-terminal SAM-like domain
LMBEFIBJ_01781 1.2e-118 K Bacterial regulatory proteins, tetR family
LMBEFIBJ_01782 2e-217 G Transmembrane secretion effector
LMBEFIBJ_01783 3.3e-244 S HipA-like C-terminal domain
LMBEFIBJ_01784 1.1e-37 L RelB antitoxin
LMBEFIBJ_01785 2.9e-51 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
LMBEFIBJ_01786 2.5e-67 S Cupin 2, conserved barrel domain protein
LMBEFIBJ_01787 1.3e-159 ksgA 2.1.1.182 J Methyltransferase domain
LMBEFIBJ_01788 1.2e-59 yccF S Inner membrane component domain
LMBEFIBJ_01789 8.5e-232 XK27_00240 K Fic/DOC family
LMBEFIBJ_01790 1.4e-26 2.7.7.7 L Transposase, Mutator family
LMBEFIBJ_01791 0.0 drrC L ABC transporter
LMBEFIBJ_01792 1.2e-242 V MatE
LMBEFIBJ_01794 1.2e-28 S rRNA binding
LMBEFIBJ_01795 1.4e-164 K Arac family
LMBEFIBJ_01796 1.2e-202 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
LMBEFIBJ_01797 1.8e-142 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LMBEFIBJ_01798 8e-282 pip 3.4.11.5 S alpha/beta hydrolase fold
LMBEFIBJ_01799 0.0 tcsS2 T Histidine kinase
LMBEFIBJ_01800 2.4e-132 K helix_turn_helix, Lux Regulon
LMBEFIBJ_01801 0.0 MV MacB-like periplasmic core domain
LMBEFIBJ_01802 3.3e-145 V ABC transporter, ATP-binding protein
LMBEFIBJ_01803 6.1e-249 metY 2.5.1.49 E Aminotransferase class-V
LMBEFIBJ_01804 1.4e-164 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
LMBEFIBJ_01805 4.3e-94 yraN L Belongs to the UPF0102 family
LMBEFIBJ_01806 2e-291 comM O Magnesium chelatase, subunit ChlI C-terminal
LMBEFIBJ_01807 1.2e-305 dprA 5.99.1.2 LU DNA recombination-mediator protein A
LMBEFIBJ_01808 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
LMBEFIBJ_01809 5.6e-175 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
LMBEFIBJ_01810 1.3e-109 safC S O-methyltransferase
LMBEFIBJ_01811 7.2e-151 fmt2 3.2.2.10 S Belongs to the LOG family
LMBEFIBJ_01812 1.5e-213 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
LMBEFIBJ_01815 7.3e-237 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LMBEFIBJ_01816 6.1e-123 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LMBEFIBJ_01817 2.5e-115 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LMBEFIBJ_01818 4e-52
LMBEFIBJ_01819 4.9e-231 clcA_2 P Voltage gated chloride channel
LMBEFIBJ_01820 2.9e-233 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
LMBEFIBJ_01821 6e-249 rnd 3.1.13.5 J 3'-5' exonuclease
LMBEFIBJ_01822 8.9e-121 S Protein of unknown function (DUF3000)
LMBEFIBJ_01823 3.1e-172 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LMBEFIBJ_01824 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
LMBEFIBJ_01825 8.5e-34
LMBEFIBJ_01826 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LMBEFIBJ_01827 1.4e-225 S Peptidase dimerisation domain
LMBEFIBJ_01828 2.8e-112 metI P Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_01829 8.8e-218 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LMBEFIBJ_01830 1.4e-168 metQ P NLPA lipoprotein
LMBEFIBJ_01831 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
LMBEFIBJ_01832 7.4e-302 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
LMBEFIBJ_01833 6.5e-34 XK27_07020 S Domain of unknown function (DUF1846)
LMBEFIBJ_01834 2e-269 XK27_09800 I Psort location CytoplasmicMembrane, score 9.99
LMBEFIBJ_01835 1.2e-191 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LMBEFIBJ_01837 4.9e-257 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LMBEFIBJ_01838 3e-69 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
LMBEFIBJ_01839 1.7e-128 3.1.3.85 G Phosphoglycerate mutase family
LMBEFIBJ_01842 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
LMBEFIBJ_01843 7.2e-228 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LMBEFIBJ_01844 2.6e-247 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
LMBEFIBJ_01845 4.4e-198 ykiI
LMBEFIBJ_01847 9e-71 XK26_04895
LMBEFIBJ_01848 2.6e-55 L Phage integrase family
LMBEFIBJ_01850 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
LMBEFIBJ_01851 7.5e-126 3.6.1.13 L NUDIX domain
LMBEFIBJ_01852 2.3e-178 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
LMBEFIBJ_01853 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LMBEFIBJ_01854 1.1e-120 pdtaR T Response regulator receiver domain protein
LMBEFIBJ_01856 2.7e-274 pyk 2.7.1.40 G Pyruvate kinase
LMBEFIBJ_01857 3.1e-165 terC P Integral membrane protein, TerC family
LMBEFIBJ_01858 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
LMBEFIBJ_01859 5.7e-55 2.1.1.80, 3.1.1.61 T Histidine kinase
LMBEFIBJ_01860 4e-63 K helix_turn_helix, Lux Regulon
LMBEFIBJ_01862 6.1e-144 XK27_10205
LMBEFIBJ_01863 2.4e-73 V ABC transporter
LMBEFIBJ_01864 1e-73 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LMBEFIBJ_01865 2.3e-252 rpsA J Ribosomal protein S1
LMBEFIBJ_01866 4.8e-157 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LMBEFIBJ_01867 7.1e-172 P Zinc-uptake complex component A periplasmic
LMBEFIBJ_01868 1.2e-163 znuC P ATPases associated with a variety of cellular activities
LMBEFIBJ_01869 3.1e-137 znuB U ABC 3 transport family
LMBEFIBJ_01870 5.1e-90 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
LMBEFIBJ_01871 1.6e-100 carD K CarD-like/TRCF domain
LMBEFIBJ_01872 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
LMBEFIBJ_01873 5e-128 T Response regulator receiver domain protein
LMBEFIBJ_01874 8.9e-190 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
LMBEFIBJ_01875 3.7e-61 KT Peptidase S24-like
LMBEFIBJ_01876 3.4e-57 ctsW S Phosphoribosyl transferase domain
LMBEFIBJ_01877 6.3e-148 cof 5.2.1.8 T Eukaryotic phosphomannomutase
LMBEFIBJ_01878 3.3e-64 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
LMBEFIBJ_01879 9.9e-267
LMBEFIBJ_01880 0.0 S Glycosyl transferase, family 2
LMBEFIBJ_01881 4.7e-56 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
LMBEFIBJ_01882 1e-163 K Cell envelope-related transcriptional attenuator domain
LMBEFIBJ_01883 0.0 D FtsK/SpoIIIE family
LMBEFIBJ_01884 1.9e-46 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
LMBEFIBJ_01886 2e-132 yplQ S Haemolysin-III related
LMBEFIBJ_01887 5.7e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LMBEFIBJ_01888 8.9e-74 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
LMBEFIBJ_01889 1.2e-277 sdaA 4.3.1.17 E Serine dehydratase alpha chain
LMBEFIBJ_01890 8.3e-94
LMBEFIBJ_01891 5.7e-137 int8 L Phage integrase family
LMBEFIBJ_01892 7.2e-151 XK27_00240 K Fic/DOC family
LMBEFIBJ_01893 1.4e-166 S Type I restriction enzyme R protein N terminus (HSDR_N)
LMBEFIBJ_01894 1.8e-28 S IrrE N-terminal-like domain
LMBEFIBJ_01895 6.8e-16
LMBEFIBJ_01896 2.5e-21
LMBEFIBJ_01903 1.9e-48 ssb1 L Single-stranded DNA-binding protein
LMBEFIBJ_01904 3.8e-87 K ParB-like nuclease domain
LMBEFIBJ_01906 4e-42 K Transcriptional regulator
LMBEFIBJ_01907 2.7e-18
LMBEFIBJ_01908 1.4e-32 A 3'-to-5' exoribonuclease specific for small oligoribonucleotides
LMBEFIBJ_01909 1.1e-49 V HNH endonuclease
LMBEFIBJ_01918 2.8e-10
LMBEFIBJ_01922 7.3e-85
LMBEFIBJ_01927 2.9e-28 L HNH endonuclease
LMBEFIBJ_01928 4.4e-28
LMBEFIBJ_01929 1.4e-182 S Terminase
LMBEFIBJ_01930 5.4e-177 S Phage portal protein, SPP1 Gp6-like
LMBEFIBJ_01931 3.2e-60
LMBEFIBJ_01933 3e-33
LMBEFIBJ_01934 2.1e-163 S Phage capsid family
LMBEFIBJ_01935 1.2e-57
LMBEFIBJ_01936 2.4e-42 S Phage protein Gp19/Gp15/Gp42
LMBEFIBJ_01937 3.7e-44
LMBEFIBJ_01938 1e-20
LMBEFIBJ_01939 8.9e-36
LMBEFIBJ_01940 7.2e-64 eae N domain, Protein
LMBEFIBJ_01941 8.1e-18
LMBEFIBJ_01943 5.3e-96 NT phage tail tape measure protein
LMBEFIBJ_01945 5.4e-195 ebh 2.1.1.80, 3.1.1.61 S cellulase activity
LMBEFIBJ_01951 9.7e-17
LMBEFIBJ_01952 8.9e-109 M Glycosyl hydrolases family 25
LMBEFIBJ_01953 4.1e-25 S Putative phage holin Dp-1
LMBEFIBJ_01955 1.9e-181 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
LMBEFIBJ_01956 1.2e-100 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
LMBEFIBJ_01957 4.8e-76 divIC D Septum formation initiator
LMBEFIBJ_01958 3.4e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
LMBEFIBJ_01959 1.1e-180 1.1.1.65 C Aldo/keto reductase family
LMBEFIBJ_01960 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LMBEFIBJ_01961 2e-114 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
LMBEFIBJ_01962 2e-76 S PIN domain
LMBEFIBJ_01963 1.2e-88 2.3.1.183 M Acetyltransferase (GNAT) domain
LMBEFIBJ_01964 0.0 S Uncharacterised protein family (UPF0182)
LMBEFIBJ_01965 2e-206 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
LMBEFIBJ_01966 2.9e-137 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LMBEFIBJ_01967 2.1e-100
LMBEFIBJ_01968 1.1e-231 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
LMBEFIBJ_01969 5e-251 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
LMBEFIBJ_01970 1.4e-281 thrC 4.2.3.1 E Threonine synthase N terminus
LMBEFIBJ_01971 3.2e-201 S Protein of unknown function (DUF1648)
LMBEFIBJ_01972 7.9e-71 K helix_turn_helix gluconate operon transcriptional repressor
LMBEFIBJ_01973 8.8e-25 pacL2 3.6.3.8 P ATPase, P-type transporting, HAD superfamily, subfamily IC
LMBEFIBJ_01974 5.2e-70 S ABC-2 family transporter protein
LMBEFIBJ_01975 3.6e-118 S ABC-2 family transporter protein
LMBEFIBJ_01976 1.4e-170 V ATPases associated with a variety of cellular activities
LMBEFIBJ_01977 1.4e-57 K helix_turn_helix gluconate operon transcriptional repressor
LMBEFIBJ_01978 1.4e-36 K helix_turn_helix, Lux Regulon
LMBEFIBJ_01979 1.2e-31 2.7.13.3 T Histidine kinase
LMBEFIBJ_01980 2e-52 EGP Major facilitator Superfamily
LMBEFIBJ_01981 1.1e-66 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
LMBEFIBJ_01982 4.2e-110 S Haloacid dehalogenase-like hydrolase
LMBEFIBJ_01983 2.1e-300 recN L May be involved in recombinational repair of damaged DNA
LMBEFIBJ_01984 4.3e-178 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LMBEFIBJ_01985 7.6e-94
LMBEFIBJ_01986 7.5e-138 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
LMBEFIBJ_01988 8.1e-196 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
LMBEFIBJ_01989 7.2e-135 L Tetratricopeptide repeat
LMBEFIBJ_01990 7.5e-255 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LMBEFIBJ_01991 1.4e-136 S Putative ABC-transporter type IV
LMBEFIBJ_01992 2.6e-97 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
LMBEFIBJ_01993 7.3e-56 M1-798 P Rhodanese Homology Domain
LMBEFIBJ_01994 6e-146 moeB 2.7.7.80 H ThiF family
LMBEFIBJ_01995 2.3e-156 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
LMBEFIBJ_01996 2.1e-28 thiS 2.8.1.10 H ThiS family
LMBEFIBJ_01997 2.3e-281 argH 4.3.2.1 E argininosuccinate lyase
LMBEFIBJ_01998 4.6e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
LMBEFIBJ_01999 5.9e-83 argR K Regulates arginine biosynthesis genes
LMBEFIBJ_02000 8.6e-184 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LMBEFIBJ_02001 1.5e-247 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
LMBEFIBJ_02002 6.5e-176 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
LMBEFIBJ_02003 3.7e-213 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
LMBEFIBJ_02004 1.4e-201 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
LMBEFIBJ_02005 6.5e-93
LMBEFIBJ_02006 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
LMBEFIBJ_02007 5.5e-200 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LMBEFIBJ_02008 4.3e-158 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LMBEFIBJ_02009 9.4e-147 cbiQ P Cobalt transport protein
LMBEFIBJ_02010 1.4e-273 ykoD P ATPases associated with a variety of cellular activities
LMBEFIBJ_02011 3.1e-107 ykoE S ABC-type cobalt transport system, permease component
LMBEFIBJ_02012 9e-15 argE E Peptidase dimerisation domain
LMBEFIBJ_02013 5.7e-258 argE E Peptidase dimerisation domain
LMBEFIBJ_02014 1.2e-106 S Protein of unknown function (DUF3043)
LMBEFIBJ_02015 8.4e-279 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LMBEFIBJ_02016 4.7e-140 S Domain of unknown function (DUF4191)
LMBEFIBJ_02017 1.3e-281 glnA 6.3.1.2 E glutamine synthetase
LMBEFIBJ_02018 3.6e-34 uidA 3.2.1.31 G Glycosyl hydrolases family 2, TIM barrel domain
LMBEFIBJ_02019 1.2e-173 S Membrane transport protein
LMBEFIBJ_02020 1.1e-42 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
LMBEFIBJ_02021 1.2e-16 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
LMBEFIBJ_02022 1.1e-84 laaE K Transcriptional regulator PadR-like family
LMBEFIBJ_02023 1.5e-116 magIII L endonuclease III
LMBEFIBJ_02024 9.7e-242 vbsD V MatE
LMBEFIBJ_02025 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LMBEFIBJ_02026 0.0 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
LMBEFIBJ_02027 1.3e-59 K LysR substrate binding domain
LMBEFIBJ_02028 1.1e-15 lacA 2.3.1.18, 2.3.1.79 S maltose O-acetyltransferase
LMBEFIBJ_02029 2.2e-211 bglA 3.2.1.21 G Glycosyl hydrolase family 1
LMBEFIBJ_02030 1.6e-146 E GDSL-like Lipase/Acylhydrolase family
LMBEFIBJ_02031 6e-173 3.1.1.53 E Carbohydrate esterase, sialic acid-specific acetylesterase
LMBEFIBJ_02032 5.7e-116 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
LMBEFIBJ_02033 4.6e-268 L PFAM Integrase catalytic
LMBEFIBJ_02034 1.5e-258 S Domain of unknown function (DUF4143)
LMBEFIBJ_02035 0.0 V FtsX-like permease family
LMBEFIBJ_02036 1.2e-123 V ABC transporter
LMBEFIBJ_02037 1e-108 K Bacterial regulatory proteins, tetR family
LMBEFIBJ_02038 2e-159 tnp3512a L Transposase
LMBEFIBJ_02039 4.6e-191 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
LMBEFIBJ_02040 3e-16 K MerR family regulatory protein
LMBEFIBJ_02041 3.8e-10 K MerR family regulatory protein
LMBEFIBJ_02042 2.4e-87 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LMBEFIBJ_02043 6.8e-57 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LMBEFIBJ_02044 7e-33 S Psort location CytoplasmicMembrane, score
LMBEFIBJ_02045 2.7e-186 MA20_14895 S Conserved hypothetical protein 698
LMBEFIBJ_02046 2.7e-82 rlrG K Bacterial regulatory helix-turn-helix protein, lysR family
LMBEFIBJ_02047 6.8e-231 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LMBEFIBJ_02048 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LMBEFIBJ_02049 1.6e-79 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
LMBEFIBJ_02050 2.1e-61 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LMBEFIBJ_02051 8.1e-17 L Transposase and inactivated derivatives IS30 family
LMBEFIBJ_02052 3e-18 L Helix-turn-helix domain
LMBEFIBJ_02053 1.4e-87 V Abi-like protein
LMBEFIBJ_02054 9.2e-202 K Transposase IS116 IS110 IS902
LMBEFIBJ_02055 1.2e-72 L IstB-like ATP binding protein
LMBEFIBJ_02056 9.9e-111 L PFAM Integrase catalytic
LMBEFIBJ_02057 4.6e-268 L PFAM Integrase catalytic
LMBEFIBJ_02058 3.1e-51 V AAA domain, putative AbiEii toxin, Type IV TA system
LMBEFIBJ_02059 3.2e-16 S ABC-2 family transporter protein
LMBEFIBJ_02060 2.8e-180 yocS S SBF-like CPA transporter family (DUF4137)
LMBEFIBJ_02062 1.1e-189 ltaE 4.1.2.48 E Beta-eliminating lyase
LMBEFIBJ_02063 9.3e-209 M Glycosyl transferase 4-like domain
LMBEFIBJ_02064 2.2e-189 mtnE 2.6.1.83 E Aminotransferase class I and II
LMBEFIBJ_02065 1.6e-223 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
LMBEFIBJ_02066 1.6e-61 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
LMBEFIBJ_02067 4.3e-138 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
LMBEFIBJ_02068 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
LMBEFIBJ_02069 3.5e-157 I alpha/beta hydrolase fold
LMBEFIBJ_02070 3.5e-255 Q D-alanine [D-alanyl carrier protein] ligase activity
LMBEFIBJ_02071 3.4e-107 Q D-alanine [D-alanyl carrier protein] ligase activity
LMBEFIBJ_02072 1.3e-99 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
LMBEFIBJ_02073 3.2e-169 hipA 2.7.11.1 S HipA N-terminal domain
LMBEFIBJ_02074 5.4e-10 C Aldo/keto reductase family
LMBEFIBJ_02075 5.8e-47 C Aldo/keto reductase family
LMBEFIBJ_02076 2.3e-31
LMBEFIBJ_02077 4.9e-272 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
LMBEFIBJ_02078 1.7e-191 3.3.1.1 H S-adenosyl-L-homocysteine hydrolase, NAD binding domain
LMBEFIBJ_02079 2.1e-239 ssnA 3.5.4.40 F Amidohydrolase family
LMBEFIBJ_02080 3e-65 MA20_39615 S Cupin superfamily (DUF985)
LMBEFIBJ_02081 2.3e-127 ET Bacterial periplasmic substrate-binding proteins
LMBEFIBJ_02082 3.2e-122 E Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02083 4.9e-121 glnQ 3.6.3.21 E AAA domain, putative AbiEii toxin, Type IV TA system
LMBEFIBJ_02084 1.8e-289 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LMBEFIBJ_02085 1.2e-183 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
LMBEFIBJ_02086 8e-230 purD 6.3.4.13 F Belongs to the GARS family
LMBEFIBJ_02087 4.2e-271 aldH 1.2.1.3, 1.2.1.5 C Aldehyde dehydrogenase family
LMBEFIBJ_02088 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
LMBEFIBJ_02089 2.5e-148 P Zinc-uptake complex component A periplasmic
LMBEFIBJ_02090 1.4e-99 S cobalamin synthesis protein
LMBEFIBJ_02091 3.9e-29 rpmB J Ribosomal L28 family
LMBEFIBJ_02092 1.4e-20 rpmG J Ribosomal protein L33
LMBEFIBJ_02093 2.5e-44 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LMBEFIBJ_02094 4.4e-34 rpmE2 J Ribosomal protein L31
LMBEFIBJ_02095 1.1e-14 rpmJ J Ribosomal protein L36
LMBEFIBJ_02096 2.6e-19 J Ribosomal L32p protein family
LMBEFIBJ_02097 5.5e-23 adcA P ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
LMBEFIBJ_02098 9.7e-171 ycgR S Predicted permease
LMBEFIBJ_02099 8.9e-136 S TIGRFAM TIGR03943 family protein
LMBEFIBJ_02100 5.2e-84 zur P Ferric uptake regulator family
LMBEFIBJ_02101 2.1e-63
LMBEFIBJ_02102 1.3e-47 tetR K Transcriptional regulator C-terminal region
LMBEFIBJ_02103 2e-84 ylbB V FtsX-like permease family
LMBEFIBJ_02104 9.1e-69 zur P Belongs to the Fur family
LMBEFIBJ_02105 2.7e-224 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LMBEFIBJ_02106 7.3e-86 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LMBEFIBJ_02107 2.8e-177 adh3 C Zinc-binding dehydrogenase
LMBEFIBJ_02108 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LMBEFIBJ_02109 6.5e-202 macB_8 V MacB-like periplasmic core domain
LMBEFIBJ_02110 2.8e-120 M Conserved repeat domain
LMBEFIBJ_02111 2.3e-123 V ATPases associated with a variety of cellular activities
LMBEFIBJ_02113 3.7e-216 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
LMBEFIBJ_02114 6.8e-156 K Helix-turn-helix domain, rpiR family
LMBEFIBJ_02115 0.0 G Alpha-L-arabinofuranosidase C-terminal domain
LMBEFIBJ_02116 2.6e-28
LMBEFIBJ_02117 2.6e-33 iaaA 3.4.19.5, 3.5.1.1 E Asparaginase
LMBEFIBJ_02118 7e-273 EK Alanine-glyoxylate amino-transferase
LMBEFIBJ_02119 4e-113 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
LMBEFIBJ_02120 3.1e-156 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
LMBEFIBJ_02121 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
LMBEFIBJ_02122 3.9e-248 dgt 3.1.5.1 F Phosphohydrolase-associated domain
LMBEFIBJ_02123 1.8e-248 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LMBEFIBJ_02124 6.3e-271 yhdG E aromatic amino acid transport protein AroP K03293
LMBEFIBJ_02125 2.7e-102 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LMBEFIBJ_02126 6.8e-92 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
LMBEFIBJ_02127 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
LMBEFIBJ_02128 5.5e-295 enhA_2 S L,D-transpeptidase catalytic domain
LMBEFIBJ_02129 1.5e-132 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
LMBEFIBJ_02130 7.1e-94 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
LMBEFIBJ_02132 1.6e-170 EGP Major Facilitator Superfamily
LMBEFIBJ_02133 1.6e-150 iunH2 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
LMBEFIBJ_02134 9.3e-09 sapF E ATPases associated with a variety of cellular activities
LMBEFIBJ_02135 1.4e-121 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
LMBEFIBJ_02136 8.8e-125 EP Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02137 7.1e-162 P Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02138 2.4e-282 E ABC transporter, substrate-binding protein, family 5
LMBEFIBJ_02139 4.5e-244 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LMBEFIBJ_02140 9.3e-141 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
LMBEFIBJ_02141 7.1e-264 G Bacterial extracellular solute-binding protein
LMBEFIBJ_02143 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
LMBEFIBJ_02144 3e-112 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
LMBEFIBJ_02145 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
LMBEFIBJ_02146 5e-148 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
LMBEFIBJ_02147 1.3e-150 yecS E Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02148 5.5e-167 pknD ET ABC transporter, substrate-binding protein, family 3
LMBEFIBJ_02149 1.7e-144 pknD ET ABC transporter, substrate-binding protein, family 3
LMBEFIBJ_02150 1.8e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
LMBEFIBJ_02151 1.1e-155 usp 3.5.1.28 CBM50 D CHAP domain protein
LMBEFIBJ_02152 5.4e-159 ftsX D Part of the ABC transporter FtsEX involved in cellular division
LMBEFIBJ_02153 1.6e-176 ftsE D Cell division ATP-binding protein FtsE
LMBEFIBJ_02154 2.4e-206 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
LMBEFIBJ_02155 1.2e-252 S Domain of unknown function (DUF4143)
LMBEFIBJ_02156 2.2e-271 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
LMBEFIBJ_02157 1.2e-123 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LMBEFIBJ_02158 3.2e-257 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LMBEFIBJ_02159 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
LMBEFIBJ_02160 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LMBEFIBJ_02161 1e-165 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LMBEFIBJ_02162 4.3e-130 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
LMBEFIBJ_02163 2.5e-226 G Major Facilitator Superfamily
LMBEFIBJ_02164 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
LMBEFIBJ_02165 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
LMBEFIBJ_02166 4.9e-260 KLT Protein tyrosine kinase
LMBEFIBJ_02167 6.1e-154 S Fibronectin type 3 domain
LMBEFIBJ_02168 0.0 S Fibronectin type 3 domain
LMBEFIBJ_02169 4e-176 S ATPase family associated with various cellular activities (AAA)
LMBEFIBJ_02170 1e-221 S Protein of unknown function DUF58
LMBEFIBJ_02171 0.0 E Transglutaminase-like superfamily
LMBEFIBJ_02172 6.1e-25 3.1.3.16 T Sigma factor PP2C-like phosphatases
LMBEFIBJ_02173 4e-70 B Belongs to the OprB family
LMBEFIBJ_02174 1.7e-87 T Forkhead associated domain
LMBEFIBJ_02175 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LMBEFIBJ_02176 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LMBEFIBJ_02177 5.8e-108
LMBEFIBJ_02178 2.5e-183 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
LMBEFIBJ_02179 2.9e-114 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
LMBEFIBJ_02180 1.2e-252 S UPF0210 protein
LMBEFIBJ_02181 8.4e-44 gcvR T Belongs to the UPF0237 family
LMBEFIBJ_02182 0.0 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
LMBEFIBJ_02183 8.5e-188 K helix_turn _helix lactose operon repressor
LMBEFIBJ_02184 1.4e-100 S Protein of unknown function, DUF624
LMBEFIBJ_02185 7.6e-169 G Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02186 6.1e-171 G Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02187 0.0 G Bacterial extracellular solute-binding protein
LMBEFIBJ_02188 9e-234 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
LMBEFIBJ_02189 7.3e-252 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
LMBEFIBJ_02190 6.9e-122 glpR K DeoR C terminal sensor domain
LMBEFIBJ_02191 1.3e-226 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
LMBEFIBJ_02192 5.8e-234 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
LMBEFIBJ_02193 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
LMBEFIBJ_02194 6.3e-132 glxR K helix_turn_helix, cAMP Regulatory protein
LMBEFIBJ_02195 6.9e-198 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
LMBEFIBJ_02196 2.4e-192 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
LMBEFIBJ_02197 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
LMBEFIBJ_02198 3.3e-250 S Uncharacterized conserved protein (DUF2183)
LMBEFIBJ_02199 1.2e-70 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
LMBEFIBJ_02200 4e-229 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
LMBEFIBJ_02201 1.1e-158 mhpC I Alpha/beta hydrolase family
LMBEFIBJ_02202 7.3e-126 F Domain of unknown function (DUF4916)
LMBEFIBJ_02203 1.9e-59 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
LMBEFIBJ_02204 1.7e-171 S G5
LMBEFIBJ_02205 1.1e-18 hipB K Helix-turn-helix XRE-family like proteins
LMBEFIBJ_02206 3.3e-133 2.7.11.1 S HipA-like C-terminal domain
LMBEFIBJ_02207 1.1e-142
LMBEFIBJ_02208 8.9e-238 wcoI DM Psort location CytoplasmicMembrane, score
LMBEFIBJ_02209 8.7e-262 S Psort location CytoplasmicMembrane, score 9.99
LMBEFIBJ_02210 1e-64 S Abi-like protein
LMBEFIBJ_02211 3.2e-156 L Transposase and inactivated derivatives IS30 family
LMBEFIBJ_02212 2.1e-157 S enterobacterial common antigen metabolic process
LMBEFIBJ_02214 5.9e-88 K Helix-turn-helix XRE-family like proteins
LMBEFIBJ_02216 1.9e-17 S Bacteriophage abortive infection AbiH
LMBEFIBJ_02217 0.0 C Domain of unknown function (DUF4365)
LMBEFIBJ_02218 5.4e-42 L Transposase
LMBEFIBJ_02219 7e-114 L PFAM Integrase catalytic
LMBEFIBJ_02220 1.5e-79 L PFAM Integrase catalytic
LMBEFIBJ_02221 2.3e-76 L IstB-like ATP binding protein
LMBEFIBJ_02222 6.6e-200 K Transposase IS116 IS110 IS902
LMBEFIBJ_02223 7.4e-21 K Transposase IS116 IS110 IS902
LMBEFIBJ_02224 4.7e-261 epsK S polysaccharide biosynthetic process
LMBEFIBJ_02225 1.7e-32 MA20_17390 GT4 M Glycosyl transferases group 1
LMBEFIBJ_02226 1.8e-65 S Glycosyltransferase like family 2
LMBEFIBJ_02227 1.1e-139 L Transposase, Mutator family
LMBEFIBJ_02228 1.1e-89 H Core-2/I-Branching enzyme
LMBEFIBJ_02229 2.2e-35 MA20_43635 M Capsular polysaccharide synthesis protein
LMBEFIBJ_02230 1.1e-43 M Glycosyltransferase like family 2
LMBEFIBJ_02231 5.6e-94 M Psort location Cytoplasmic, score 8.87
LMBEFIBJ_02232 3.9e-13 wzy S EpsG family
LMBEFIBJ_02233 4.3e-30 lgtD M Glycosyltransferase like family 2
LMBEFIBJ_02234 9.2e-86 cps1D M Domain of unknown function (DUF4422)
LMBEFIBJ_02235 1.8e-57 L Helix-turn-helix domain
LMBEFIBJ_02236 1.8e-107 3.1.3.48 T Low molecular weight phosphatase family
LMBEFIBJ_02237 8.2e-200 tnp3512a L Transposase
LMBEFIBJ_02238 0.0 rfbP 2.7.8.6 M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
LMBEFIBJ_02239 7.3e-58
LMBEFIBJ_02240 2.6e-240 mloB K Putative DNA-binding domain
LMBEFIBJ_02241 1.8e-18 L Transposase
LMBEFIBJ_02242 6e-158 S AAA ATPase domain
LMBEFIBJ_02243 0.0 yvnB 3.1.4.53 S Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
LMBEFIBJ_02244 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
LMBEFIBJ_02245 1.2e-269 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
LMBEFIBJ_02247 2.8e-168 hisN 3.1.3.25 G Inositol monophosphatase family
LMBEFIBJ_02248 0.0 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
LMBEFIBJ_02249 4.8e-285 arc O AAA ATPase forming ring-shaped complexes
LMBEFIBJ_02250 1.7e-125 apl 3.1.3.1 S SNARE associated Golgi protein
LMBEFIBJ_02251 1e-125 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
LMBEFIBJ_02252 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LMBEFIBJ_02253 1.2e-131 3.8.1.2 S Haloacid dehalogenase-like hydrolase
LMBEFIBJ_02254 2.4e-181 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LMBEFIBJ_02255 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
LMBEFIBJ_02256 1.1e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
LMBEFIBJ_02257 4.2e-228 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LMBEFIBJ_02258 3.4e-218 vex3 V ABC transporter permease
LMBEFIBJ_02259 3e-210 vex1 V Efflux ABC transporter, permease protein
LMBEFIBJ_02260 3.2e-110 vex2 V ABC transporter, ATP-binding protein
LMBEFIBJ_02261 1.1e-97 ptpA 3.1.3.48 T low molecular weight
LMBEFIBJ_02262 2.8e-125 folA 1.5.1.3 H dihydrofolate reductase
LMBEFIBJ_02264 1.1e-172 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LMBEFIBJ_02265 6.9e-74 attW O OsmC-like protein
LMBEFIBJ_02266 1.5e-189 T Universal stress protein family
LMBEFIBJ_02267 9.7e-103 M NlpC/P60 family
LMBEFIBJ_02268 1e-79 M NlpC/P60 family
LMBEFIBJ_02269 1.8e-165 usp 3.5.1.28 CBM50 S CHAP domain
LMBEFIBJ_02271 9.8e-211 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
LMBEFIBJ_02272 4.3e-37
LMBEFIBJ_02273 1.1e-193 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
LMBEFIBJ_02274 1.7e-114 phoU P Plays a role in the regulation of phosphate uptake
LMBEFIBJ_02275 1.4e-138 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LMBEFIBJ_02276 7.3e-18 pin L Resolvase, N terminal domain
LMBEFIBJ_02277 7.9e-08 L Transposase, Mutator family
LMBEFIBJ_02278 3.2e-17 C Cytochrome P450
LMBEFIBJ_02279 1.6e-44 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
LMBEFIBJ_02280 2.4e-33 2.7.7.73, 2.7.7.80 H ThiF family
LMBEFIBJ_02282 7.1e-89 tnp3503b 2.7.7.7 L Transposase and inactivated derivatives
LMBEFIBJ_02283 3.6e-54 yxaM EGP Major facilitator Superfamily
LMBEFIBJ_02284 5.6e-127 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
LMBEFIBJ_02285 0.0 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
LMBEFIBJ_02287 9.8e-206 araJ EGP Major facilitator Superfamily
LMBEFIBJ_02288 0.0 phoC 3.1.3.5 I PAP2 superfamily
LMBEFIBJ_02289 9.5e-281 S Domain of unknown function (DUF4037)
LMBEFIBJ_02290 4.4e-112 S Protein of unknown function (DUF4125)
LMBEFIBJ_02291 2.5e-281 S alpha beta
LMBEFIBJ_02292 1.9e-55
LMBEFIBJ_02293 2.5e-168 pspC KT PspC domain
LMBEFIBJ_02294 5.8e-225 tcsS3 KT PspC domain
LMBEFIBJ_02295 2e-110 degU K helix_turn_helix, Lux Regulon
LMBEFIBJ_02296 9.1e-184 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
LMBEFIBJ_02297 1.2e-307 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
LMBEFIBJ_02298 1.1e-187 mdsC 2.7.1.162, 2.7.1.39 S Phosphotransferase enzyme family
LMBEFIBJ_02299 0.0 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
LMBEFIBJ_02300 1.6e-150 G ABC transporter permease
LMBEFIBJ_02301 1.9e-170 malC G Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02302 1.3e-246 G Bacterial extracellular solute-binding protein
LMBEFIBJ_02304 2.8e-238 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LMBEFIBJ_02305 2.3e-202 I Diacylglycerol kinase catalytic domain
LMBEFIBJ_02306 2.4e-57 arbG K CAT RNA binding domain
LMBEFIBJ_02307 4.6e-268 L PFAM Integrase catalytic
LMBEFIBJ_02308 4.2e-85 arbG K CAT RNA binding domain
LMBEFIBJ_02309 0.0 crr 2.7.1.193 G pts system, glucose-specific IIABC component
LMBEFIBJ_02310 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
LMBEFIBJ_02311 6.9e-187 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
LMBEFIBJ_02312 1.5e-68 K Transcriptional regulator
LMBEFIBJ_02313 1.7e-272 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LMBEFIBJ_02315 8.7e-124 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LMBEFIBJ_02316 1.5e-124 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LMBEFIBJ_02318 3.9e-92
LMBEFIBJ_02319 2.4e-276 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LMBEFIBJ_02320 3.1e-217 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
LMBEFIBJ_02321 2.4e-212 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LMBEFIBJ_02322 1.4e-78 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LMBEFIBJ_02323 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LMBEFIBJ_02324 4.3e-184 nusA K Participates in both transcription termination and antitermination
LMBEFIBJ_02325 1.5e-124
LMBEFIBJ_02326 6.2e-244 G Bacterial extracellular solute-binding protein
LMBEFIBJ_02327 6.5e-171 P Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02328 3.1e-159 P Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02329 2.6e-12 L Integrase core domain
LMBEFIBJ_02331 2.5e-218 S Psort location Cytoplasmic, score
LMBEFIBJ_02332 5.2e-150 E Transglutaminase/protease-like homologues
LMBEFIBJ_02333 0.0 gcs2 S A circularly permuted ATPgrasp
LMBEFIBJ_02334 1.4e-167 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
LMBEFIBJ_02335 7.7e-62 rplQ J Ribosomal protein L17
LMBEFIBJ_02336 2e-183 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LMBEFIBJ_02337 1.5e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LMBEFIBJ_02338 4.7e-61 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LMBEFIBJ_02339 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
LMBEFIBJ_02340 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LMBEFIBJ_02341 6.5e-99 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
LMBEFIBJ_02342 7.6e-247 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
LMBEFIBJ_02343 1.1e-75 rplO J binds to the 23S rRNA
LMBEFIBJ_02344 9.2e-26 rpmD J Ribosomal protein L30p/L7e
LMBEFIBJ_02345 1.5e-95 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LMBEFIBJ_02346 2.1e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LMBEFIBJ_02347 1.6e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LMBEFIBJ_02348 5.5e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LMBEFIBJ_02349 9.2e-18 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LMBEFIBJ_02350 4.4e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LMBEFIBJ_02351 1.8e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LMBEFIBJ_02352 6.6e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LMBEFIBJ_02353 6.4e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LMBEFIBJ_02354 4.1e-37 rpmC J Belongs to the universal ribosomal protein uL29 family
LMBEFIBJ_02355 1.7e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LMBEFIBJ_02356 5.2e-102 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LMBEFIBJ_02357 4.3e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LMBEFIBJ_02358 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LMBEFIBJ_02359 8e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LMBEFIBJ_02360 3.4e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
LMBEFIBJ_02361 1.2e-115 rplD J Forms part of the polypeptide exit tunnel
LMBEFIBJ_02362 4.3e-115 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LMBEFIBJ_02363 4e-50 rpsJ J Involved in the binding of tRNA to the ribosomes
LMBEFIBJ_02364 1.5e-143 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
LMBEFIBJ_02365 2.2e-38 ywiC S YwiC-like protein
LMBEFIBJ_02366 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
LMBEFIBJ_02367 2.6e-222 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
LMBEFIBJ_02368 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
LMBEFIBJ_02369 3.7e-82 rpsI J Belongs to the universal ribosomal protein uS9 family
LMBEFIBJ_02370 3.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LMBEFIBJ_02371 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
LMBEFIBJ_02372 1.1e-106
LMBEFIBJ_02373 2.1e-109 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
LMBEFIBJ_02374 1.5e-186 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LMBEFIBJ_02377 9.6e-232 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LMBEFIBJ_02378 1.7e-213 dapC E Aminotransferase class I and II
LMBEFIBJ_02379 1.7e-59 fdxA C 4Fe-4S binding domain
LMBEFIBJ_02380 4.4e-267 E aromatic amino acid transport protein AroP K03293
LMBEFIBJ_02381 3e-218 murB 1.3.1.98 M Cell wall formation
LMBEFIBJ_02382 4.1e-25 rpmG J Ribosomal protein L33
LMBEFIBJ_02386 1.5e-40 megL 2.5.1.48, 4.4.1.1, 4.4.1.11, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
LMBEFIBJ_02387 6.7e-47 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
LMBEFIBJ_02388 8.9e-177
LMBEFIBJ_02389 6.7e-127 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
LMBEFIBJ_02390 1.5e-119 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
LMBEFIBJ_02391 2.8e-30 fmdB S Putative regulatory protein
LMBEFIBJ_02392 1.6e-93 flgA NO SAF
LMBEFIBJ_02393 6e-31
LMBEFIBJ_02394 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
LMBEFIBJ_02395 8.3e-188 T Forkhead associated domain
LMBEFIBJ_02396 1.1e-33 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
LMBEFIBJ_02397 3.1e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LMBEFIBJ_02398 8.9e-137 3.2.1.8 S alpha beta
LMBEFIBJ_02399 3.9e-246 pbuO S Permease family
LMBEFIBJ_02400 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
LMBEFIBJ_02401 1e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LMBEFIBJ_02402 7.4e-169 lanT 3.6.3.27 V ABC transporter
LMBEFIBJ_02403 1.2e-154 cbiO V ATPases associated with a variety of cellular activities
LMBEFIBJ_02407 4.7e-27 2.7.13.3 T Histidine kinase
LMBEFIBJ_02408 3.3e-52 K helix_turn_helix, Lux Regulon
LMBEFIBJ_02409 9.5e-17 L Transposase and inactivated derivatives IS30 family
LMBEFIBJ_02410 1.1e-93 L Transposase and inactivated derivatives IS30 family
LMBEFIBJ_02411 1.8e-114
LMBEFIBJ_02412 5.6e-103
LMBEFIBJ_02415 8.9e-26 dexB 2.4.1.7, 3.2.1.20, 3.2.1.51, 3.2.1.70, 3.2.1.93, 3.2.1.97 GH101,GH13,GH29,GH31 G hydrolase activity, hydrolyzing O-glycosyl compounds
LMBEFIBJ_02416 1.3e-96 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
LMBEFIBJ_02417 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
LMBEFIBJ_02418 1.4e-292 pccB I Carboxyl transferase domain
LMBEFIBJ_02419 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
LMBEFIBJ_02420 1e-13 bioY S BioY family
LMBEFIBJ_02421 5.5e-140 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
LMBEFIBJ_02422 0.0
LMBEFIBJ_02423 4.4e-139 QT PucR C-terminal helix-turn-helix domain
LMBEFIBJ_02424 2.7e-132 hmgR K Sugar-specific transcriptional regulator TrmB
LMBEFIBJ_02425 3e-153 K Bacterial transcriptional regulator
LMBEFIBJ_02427 1.3e-31 S Unextendable partial coding region
LMBEFIBJ_02428 6.1e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
LMBEFIBJ_02429 1e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LMBEFIBJ_02430 1.6e-112 nusG K Participates in transcription elongation, termination and antitermination
LMBEFIBJ_02431 1.2e-32 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
LMBEFIBJ_02433 2.9e-229 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
LMBEFIBJ_02434 3.9e-204 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
LMBEFIBJ_02435 5e-304 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LMBEFIBJ_02436 8.8e-40 rpmA J Ribosomal L27 protein
LMBEFIBJ_02437 2.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
LMBEFIBJ_02438 0.0 rne 3.1.26.12 J Ribonuclease E/G family
LMBEFIBJ_02439 2e-228 dapE 3.5.1.18 E Peptidase dimerisation domain
LMBEFIBJ_02440 5.5e-167 mdcF S Transporter, auxin efflux carrier (AEC) family protein
LMBEFIBJ_02441 9.4e-77 fucU 5.1.3.29 G RbsD / FucU transport protein family
LMBEFIBJ_02442 5.1e-147 S Amidohydrolase
LMBEFIBJ_02443 1.4e-202 fucP G Major Facilitator Superfamily
LMBEFIBJ_02444 5.6e-141 IQ KR domain
LMBEFIBJ_02445 1.4e-245 4.2.1.68 M Enolase C-terminal domain-like
LMBEFIBJ_02446 1.5e-181 K Bacterial regulatory proteins, lacI family
LMBEFIBJ_02447 9e-254 V Efflux ABC transporter, permease protein
LMBEFIBJ_02448 1.7e-133 V ATPases associated with a variety of cellular activities
LMBEFIBJ_02450 2.2e-16 S Protein of unknown function (DUF1778)
LMBEFIBJ_02451 6.9e-278 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
LMBEFIBJ_02452 1.2e-205 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
LMBEFIBJ_02453 1.4e-232 hom 1.1.1.3 E Homoserine dehydrogenase
LMBEFIBJ_02454 3.2e-292 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
LMBEFIBJ_02455 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
LMBEFIBJ_02456 4.3e-172 K LysR substrate binding domain protein
LMBEFIBJ_02457 5.1e-245 patB 4.4.1.8 E Aminotransferase, class I II
LMBEFIBJ_02458 4.1e-253 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LMBEFIBJ_02459 1.2e-252 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
LMBEFIBJ_02460 4.1e-206 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
LMBEFIBJ_02461 3.5e-131 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LMBEFIBJ_02462 4.8e-268 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LMBEFIBJ_02463 1.6e-138 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
LMBEFIBJ_02464 9.7e-244 S Calcineurin-like phosphoesterase
LMBEFIBJ_02465 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LMBEFIBJ_02466 1.4e-212 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
LMBEFIBJ_02467 5.4e-116
LMBEFIBJ_02468 3.4e-259 lacS G Psort location CytoplasmicMembrane, score 10.00
LMBEFIBJ_02469 1e-271 lacS G Psort location CytoplasmicMembrane, score 10.00
LMBEFIBJ_02470 4.6e-268 L PFAM Integrase catalytic
LMBEFIBJ_02471 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
LMBEFIBJ_02472 0.0 3.2.1.51 GH95 G Glycosyl hydrolase family 65, N-terminal domain
LMBEFIBJ_02473 3.3e-256 fucA 3.2.1.51 GH29 G Alpha-L-fucosidase
LMBEFIBJ_02474 4.2e-69 fucU 5.1.3.29 G RbsD / FucU transport protein family
LMBEFIBJ_02475 4.7e-152 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
LMBEFIBJ_02476 3.9e-142 IQ KR domain
LMBEFIBJ_02477 1.8e-242 4.2.1.68 M Enolase C-terminal domain-like
LMBEFIBJ_02478 1.3e-95 S Protein of unknown function, DUF624
LMBEFIBJ_02479 3.9e-152 G Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02480 1.6e-150 G Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02481 9.3e-220 G Bacterial extracellular solute-binding protein
LMBEFIBJ_02482 3.9e-152 G Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02483 1.6e-150 G Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02484 2e-233 G Bacterial extracellular solute-binding protein
LMBEFIBJ_02485 1.6e-123 3.2.1.18, 3.2.1.51 GH29,GH33 G BNR repeat-like domain
LMBEFIBJ_02486 3.5e-137 nanL 4.3.3.7 EM Dihydrodipicolinate synthetase family
LMBEFIBJ_02487 3.3e-249 G Bacterial extracellular solute-binding protein
LMBEFIBJ_02488 3.6e-227 G Bacterial extracellular solute-binding protein
LMBEFIBJ_02489 8.2e-224 G Bacterial extracellular solute-binding protein
LMBEFIBJ_02490 3.7e-224 G Bacterial extracellular solute-binding protein
LMBEFIBJ_02491 1.4e-204 G Glycosyl hydrolase family 20, domain 2
LMBEFIBJ_02492 1.5e-31 3.1.3.18 S phosphoglycolate phosphatase activity
LMBEFIBJ_02493 8.6e-139 G Extracellular solute-binding protein
LMBEFIBJ_02494 2.5e-117 YSH1 S Metallo-beta-lactamase superfamily
LMBEFIBJ_02495 2.2e-100 gtsC P Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02496 1.2e-102 gtsB G PFAM Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02497 3.5e-128 malK P Belongs to the ABC transporter superfamily
LMBEFIBJ_02498 9.9e-94 M1-431 S Protein of unknown function (DUF1706)
LMBEFIBJ_02499 1.3e-114 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LMBEFIBJ_02500 8.6e-76 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LMBEFIBJ_02501 6.1e-93 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
LMBEFIBJ_02502 3.4e-202 G Bacterial extracellular solute-binding protein
LMBEFIBJ_02503 3.6e-128 ugpE G Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02504 1.3e-131 ugpA P Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02505 2.3e-158 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
LMBEFIBJ_02506 4.7e-156 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
LMBEFIBJ_02507 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
LMBEFIBJ_02508 7.5e-74 2.3.1.57 K Acetyltransferase (GNAT) domain
LMBEFIBJ_02509 4.5e-157 fahA Q Fumarylacetoacetate (FAA) hydrolase family
LMBEFIBJ_02510 3.6e-224 glf 5.4.99.9 M UDP-galactopyranose mutase
LMBEFIBJ_02511 3.3e-183 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
LMBEFIBJ_02512 2.7e-125 lacG G Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02513 4.4e-122 G Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02514 2.8e-174 srrA1 G Bacterial extracellular solute-binding protein
LMBEFIBJ_02515 2.1e-171 rfbJ M Glycosyl transferase family 2
LMBEFIBJ_02516 3.6e-165 I Acyltransferase family
LMBEFIBJ_02517 9.4e-263
LMBEFIBJ_02518 1.1e-157
LMBEFIBJ_02519 0.0 wbbM M Glycosyl transferase family 8
LMBEFIBJ_02520 1.2e-169 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
LMBEFIBJ_02521 1.2e-133 rgpC U Transport permease protein
LMBEFIBJ_02522 0.0 wbbM M Glycosyl transferase family 8
LMBEFIBJ_02523 2.9e-232 1.1.1.22 M UDP binding domain
LMBEFIBJ_02524 2.9e-201 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
LMBEFIBJ_02525 3.2e-199 I transferase activity, transferring acyl groups other than amino-acyl groups
LMBEFIBJ_02526 0.0 pflA S Protein of unknown function (DUF4012)
LMBEFIBJ_02527 2e-211 V ABC transporter permease
LMBEFIBJ_02528 2.7e-181 V ABC transporter
LMBEFIBJ_02529 2e-134 T HD domain
LMBEFIBJ_02530 5e-159 S Glutamine amidotransferase domain
LMBEFIBJ_02531 0.0 kup P Transport of potassium into the cell
LMBEFIBJ_02532 2e-185 tatD L TatD related DNase
LMBEFIBJ_02534 5.4e-153 lipA I Hydrolase, alpha beta domain protein
LMBEFIBJ_02535 8.2e-114 xylE U Sugar (and other) transporter
LMBEFIBJ_02536 1e-62 2.7.1.2 GK ROK family
LMBEFIBJ_02537 4.4e-89 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
LMBEFIBJ_02538 5.5e-28 K helix_turn_helix, arabinose operon control protein
LMBEFIBJ_02539 1.8e-106 XK27_00240 K Fic/DOC family
LMBEFIBJ_02540 1.3e-17 L HTH-like domain
LMBEFIBJ_02541 1.9e-195 S Fic/DOC family
LMBEFIBJ_02542 0.0 yknV V ABC transporter
LMBEFIBJ_02543 0.0 mdlA2 V ABC transporter
LMBEFIBJ_02544 3.3e-269 S ATPase domain predominantly from Archaea
LMBEFIBJ_02545 5e-251 S Domain of unknown function (DUF4143)
LMBEFIBJ_02546 3.6e-195 G Glycosyl hydrolases family 43
LMBEFIBJ_02547 1.1e-153 U Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02548 3.3e-175 U Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02549 3.1e-242 G Bacterial extracellular solute-binding protein
LMBEFIBJ_02550 6.2e-196 K helix_turn _helix lactose operon repressor
LMBEFIBJ_02551 0.0 lacZ 3.2.1.23 G Beta-galactosidase trimerisation domain
LMBEFIBJ_02552 4.7e-268 S AAA domain
LMBEFIBJ_02553 1e-249 EGP Major Facilitator Superfamily
LMBEFIBJ_02554 0.0 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
LMBEFIBJ_02555 0.0 oppD P Belongs to the ABC transporter superfamily
LMBEFIBJ_02556 9.2e-173 dppC EP N-terminal TM domain of oligopeptide transport permease C
LMBEFIBJ_02557 2e-175 appB EP Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02558 5e-263 pepC 3.4.22.40 E Peptidase C1-like family
LMBEFIBJ_02559 2.1e-160 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
LMBEFIBJ_02560 2.8e-45
LMBEFIBJ_02561 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LMBEFIBJ_02562 1.2e-114
LMBEFIBJ_02563 3.3e-181 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LMBEFIBJ_02564 1e-178 2.7.7.7 L Transposase, Mutator family
LMBEFIBJ_02566 1.4e-128 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
LMBEFIBJ_02567 0.0 lmrA2 V ABC transporter transmembrane region
LMBEFIBJ_02568 0.0 lmrA1 V ABC transporter, ATP-binding protein
LMBEFIBJ_02569 7.8e-78 ydgJ K helix_turn_helix multiple antibiotic resistance protein
LMBEFIBJ_02570 2.6e-267 cycA E Amino acid permease
LMBEFIBJ_02571 0.0 V FtsX-like permease family
LMBEFIBJ_02572 6.1e-123 V ABC transporter
LMBEFIBJ_02573 1.8e-255 aroP E aromatic amino acid transport protein AroP K03293
LMBEFIBJ_02574 2.1e-101 S Protein of unknown function, DUF624
LMBEFIBJ_02575 4.4e-152 rafG G ABC transporter permease
LMBEFIBJ_02576 2.6e-147 msmF G Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02577 1.1e-181 K Psort location Cytoplasmic, score
LMBEFIBJ_02578 1.1e-247 amyE G Bacterial extracellular solute-binding protein
LMBEFIBJ_02579 4.2e-135 G Phosphoglycerate mutase family
LMBEFIBJ_02580 9.8e-59 S Protein of unknown function (DUF4235)
LMBEFIBJ_02581 5.5e-141 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
LMBEFIBJ_02582 0.0 pip S YhgE Pip domain protein
LMBEFIBJ_02583 6.5e-270 pip S YhgE Pip domain protein
LMBEFIBJ_02584 2.1e-40
LMBEFIBJ_02585 1.3e-31 S Unextendable partial coding region
LMBEFIBJ_02587 1.3e-31 S Unextendable partial coding region
LMBEFIBJ_02588 1.6e-145 cobB2 K Sir2 family
LMBEFIBJ_02589 1.5e-233 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
LMBEFIBJ_02590 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
LMBEFIBJ_02591 6.8e-09 L Transposase
LMBEFIBJ_02592 2.9e-154 G Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02593 1.1e-143 malC G Binding-protein-dependent transport system inner membrane component
LMBEFIBJ_02594 1.3e-243 msmE7 G Bacterial extracellular solute-binding protein
LMBEFIBJ_02595 3.5e-227 nagC GK ROK family
LMBEFIBJ_02596 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
LMBEFIBJ_02597 2.7e-82 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
LMBEFIBJ_02598 0.0 yjcE P Sodium/hydrogen exchanger family
LMBEFIBJ_02599 2.1e-148 ypfH S Phospholipase/Carboxylesterase
LMBEFIBJ_02600 1.3e-127
LMBEFIBJ_02601 3.4e-111 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
LMBEFIBJ_02602 8.7e-80
LMBEFIBJ_02603 3.2e-174 U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
LMBEFIBJ_02604 1.7e-168 endOF2 3.2.1.14, 3.2.1.35, 3.2.1.52, 3.2.1.96 GH18,GH20 G Glycosyl hydrolase, family 20, catalytic domain
LMBEFIBJ_02605 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
LMBEFIBJ_02606 2e-16 K helix_turn _helix lactose operon repressor
LMBEFIBJ_02607 4.1e-84 2.7.1.208 G phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
LMBEFIBJ_02608 1.6e-288 nagE 2.7.1.193, 2.7.1.199 G phosphotransferase system, EIIB
LMBEFIBJ_02609 1.1e-204 EGP Major facilitator Superfamily
LMBEFIBJ_02610 2.4e-173 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LMBEFIBJ_02611 1.2e-266 KLT Domain of unknown function (DUF4032)
LMBEFIBJ_02612 1.8e-209 ugpC E Belongs to the ABC transporter superfamily
LMBEFIBJ_02614 5.9e-219 2.4.1.166 GT2 M Glycosyltransferase like family 2
LMBEFIBJ_02615 1.1e-189 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LMBEFIBJ_02617 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LMBEFIBJ_02618 7.8e-79 nrdI F Probably involved in ribonucleotide reductase function
LMBEFIBJ_02619 4.1e-43 nrdH O Glutaredoxin
LMBEFIBJ_02620 9.8e-276 KLT Protein tyrosine kinase
LMBEFIBJ_02621 2.1e-121 O Thioredoxin
LMBEFIBJ_02623 1.5e-211 S G5
LMBEFIBJ_02624 4.5e-166 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
LMBEFIBJ_02625 7.7e-177 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
LMBEFIBJ_02626 4.2e-107 S LytR cell envelope-related transcriptional attenuator
LMBEFIBJ_02627 1.1e-275 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
LMBEFIBJ_02628 1.3e-118 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
LMBEFIBJ_02629 0.0
LMBEFIBJ_02630 0.0 murJ KLT MviN-like protein
LMBEFIBJ_02631 2.2e-185 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
LMBEFIBJ_02632 2e-218 parB K Belongs to the ParB family
LMBEFIBJ_02633 7.8e-177 parA D CobQ CobB MinD ParA nucleotide binding domain protein
LMBEFIBJ_02634 4.2e-121 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
LMBEFIBJ_02635 1.1e-92 jag S Putative single-stranded nucleic acids-binding domain
LMBEFIBJ_02636 5.8e-175 yidC U Membrane protein insertase, YidC Oxa1 family
LMBEFIBJ_02637 6.9e-33 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
LMBEFIBJ_02638 2.6e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)