ORF_ID e_value Gene_name EC_number CAZy COGs Description
JHODCLMD_00001 7.2e-250 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JHODCLMD_00002 5.2e-204 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
JHODCLMD_00003 3.8e-34 yaaA S S4 domain protein YaaA
JHODCLMD_00004 1.1e-203 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JHODCLMD_00005 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JHODCLMD_00006 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JHODCLMD_00007 1.2e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
JHODCLMD_00008 3.1e-77 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
JHODCLMD_00009 1.6e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JHODCLMD_00010 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
JHODCLMD_00011 2e-74 rplI J Binds to the 23S rRNA
JHODCLMD_00012 1.8e-235 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
JHODCLMD_00013 6.9e-207 yttB EGP Major facilitator Superfamily
JHODCLMD_00014 9.1e-61
JHODCLMD_00015 2.1e-157 S Polyphosphate nucleotide phosphotransferase, PPK2 family
JHODCLMD_00017 1.8e-72 K helix_turn_helix multiple antibiotic resistance protein
JHODCLMD_00018 2.6e-308 lmrA 3.6.3.44 V ABC transporter
JHODCLMD_00020 3.1e-130 K response regulator
JHODCLMD_00021 0.0 vicK 2.7.13.3 T Histidine kinase
JHODCLMD_00022 2.4e-245 yycH S YycH protein
JHODCLMD_00023 2.7e-149 yycI S YycH protein
JHODCLMD_00024 2.3e-153 vicX 3.1.26.11 S domain protein
JHODCLMD_00025 1.6e-214 htrA 3.4.21.107 O serine protease
JHODCLMD_00027 1.6e-85 pgpA 3.1.3.27 I Phosphatidylglycerophosphatase A
JHODCLMD_00028 4e-176 ABC-SBP S ABC transporter
JHODCLMD_00029 1.8e-87 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
JHODCLMD_00031 7.8e-32
JHODCLMD_00032 0.0 clpL O associated with various cellular activities
JHODCLMD_00034 2.6e-103 wecD3 K PFAM GCN5-related N-acetyltransferase
JHODCLMD_00035 2.5e-283 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JHODCLMD_00036 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
JHODCLMD_00037 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
JHODCLMD_00038 1.5e-172 malR K Transcriptional regulator, LacI family
JHODCLMD_00039 5.7e-214 phbA 2.3.1.9 I Belongs to the thiolase family
JHODCLMD_00040 1.1e-256 malT G Major Facilitator
JHODCLMD_00041 0.0 mapA 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
JHODCLMD_00042 5.4e-121 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
JHODCLMD_00043 1e-71
JHODCLMD_00044 1.1e-86 2.7.6.5 T Region found in RelA / SpoT proteins
JHODCLMD_00045 3.3e-118 K response regulator
JHODCLMD_00046 1.8e-226 sptS 2.7.13.3 T Histidine kinase
JHODCLMD_00047 3e-215 yfeO P Voltage gated chloride channel
JHODCLMD_00048 1.6e-257 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
JHODCLMD_00049 1.1e-12 L PFAM transposase IS200-family protein
JHODCLMD_00050 9.4e-33 L PFAM transposase IS200-family protein
JHODCLMD_00051 3e-136 puuD S peptidase C26
JHODCLMD_00052 5.9e-168 yvgN C Aldo keto reductase
JHODCLMD_00053 0.0 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
JHODCLMD_00054 3e-87 hmpT S ECF-type riboflavin transporter, S component
JHODCLMD_00055 3.4e-263 nox C NADH oxidase
JHODCLMD_00056 9.9e-188 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
JHODCLMD_00057 1.4e-253 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
JHODCLMD_00058 6.9e-83
JHODCLMD_00059 1.4e-95 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
JHODCLMD_00061 1.1e-13 steT_1 E amino acid
JHODCLMD_00062 2.1e-12 K Transcriptional regulator, TetR family
JHODCLMD_00063 3.4e-74 K Transcriptional regulator, TetR family
JHODCLMD_00064 8.3e-72
JHODCLMD_00065 1.5e-267 tagE3 2.4.1.52 GT4 M Glycosyl transferases group 1
JHODCLMD_00066 1.4e-270 tagE2 2.4.1.52 GT4 M Poly(Glycerol-phosphate) alpha-glucosyltransferase
JHODCLMD_00067 0.0 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
JHODCLMD_00068 1.4e-31 G Major Facilitator
JHODCLMD_00069 1.6e-221 G Major Facilitator
JHODCLMD_00070 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
JHODCLMD_00071 4.8e-207 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
JHODCLMD_00072 6.1e-260 G Major Facilitator
JHODCLMD_00073 1.4e-173 K Transcriptional regulator, LacI family
JHODCLMD_00074 5.9e-266 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JHODCLMD_00076 2.9e-102 nqr 1.5.1.36 S reductase
JHODCLMD_00077 3.4e-201 XK27_09615 S reductase
JHODCLMD_00078 1.7e-176 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
JHODCLMD_00079 1e-262 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
JHODCLMD_00080 1.2e-249 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JHODCLMD_00081 2e-264 glnP P ABC transporter
JHODCLMD_00082 1.9e-138 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
JHODCLMD_00083 4.7e-220 cycA E Amino acid permease
JHODCLMD_00084 1.3e-218 nupG F Nucleoside transporter
JHODCLMD_00085 6.6e-170 rihC 3.2.2.1 F Nucleoside
JHODCLMD_00086 7.7e-163 fadB4 1.1.1.157 I 3-hydroxyacyl-CoA dehydrogenase
JHODCLMD_00087 3.7e-123 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
JHODCLMD_00088 1.3e-142 noc K Belongs to the ParB family
JHODCLMD_00089 1e-139 soj D Sporulation initiation inhibitor
JHODCLMD_00090 9.4e-153 spo0J K Belongs to the ParB family
JHODCLMD_00091 1.2e-31 yyzM S Bacterial protein of unknown function (DUF951)
JHODCLMD_00092 2e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
JHODCLMD_00093 3.1e-136 XK27_01040 S Protein of unknown function (DUF1129)
JHODCLMD_00094 3.4e-118 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
JHODCLMD_00095 4.5e-235 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
JHODCLMD_00096 1.6e-233 pdp 2.4.2.2, 2.4.2.4 F pyrimidine-nucleoside phosphorylase
JHODCLMD_00097 3.1e-130 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
JHODCLMD_00098 1.3e-168 deoR K sugar-binding domain protein
JHODCLMD_00099 1.6e-208 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
JHODCLMD_00100 3.8e-125 K response regulator
JHODCLMD_00101 4.1e-201 hpk31 2.7.13.3 T Histidine kinase
JHODCLMD_00102 2.3e-138 azlC E AzlC protein
JHODCLMD_00103 1.6e-52 azlD S branched-chain amino acid
JHODCLMD_00104 3.1e-24 K LysR substrate binding domain
JHODCLMD_00105 8.6e-98 K LysR substrate binding domain
JHODCLMD_00106 5e-173 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
JHODCLMD_00107 7.3e-247 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
JHODCLMD_00108 8.6e-173 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
JHODCLMD_00109 6e-129 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
JHODCLMD_00110 2.5e-115 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JHODCLMD_00111 1.8e-113 thiE 2.5.1.3, 2.7.6.2, 5.4.2.6 S Haloacid dehalogenase-like hydrolase
JHODCLMD_00112 1.1e-236 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
JHODCLMD_00113 1.9e-176 K AI-2E family transporter
JHODCLMD_00114 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
JHODCLMD_00115 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
JHODCLMD_00116 4e-81 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JHODCLMD_00117 3.9e-215 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JHODCLMD_00118 8.9e-253 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JHODCLMD_00119 4.8e-131 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
JHODCLMD_00120 4.1e-37 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JHODCLMD_00121 3.6e-128 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JHODCLMD_00122 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JHODCLMD_00123 4.5e-277 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JHODCLMD_00124 6.2e-196 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
JHODCLMD_00125 8e-105 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JHODCLMD_00126 1e-295 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
JHODCLMD_00127 2.8e-243 purD 6.3.4.13 F Belongs to the GARS family
JHODCLMD_00128 1e-130 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JHODCLMD_00129 1.5e-165
JHODCLMD_00130 5.4e-239 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
JHODCLMD_00131 1.7e-29
JHODCLMD_00132 4.4e-18
JHODCLMD_00135 4.3e-44
JHODCLMD_00137 6.1e-57
JHODCLMD_00138 2.7e-08
JHODCLMD_00141 3.1e-62 XK27_01125 L PFAM IS66 Orf2 family protein
JHODCLMD_00142 3.2e-281 L Transposase IS66 family
JHODCLMD_00143 1.1e-110 L PFAM Integrase catalytic region
JHODCLMD_00144 1.9e-65 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JHODCLMD_00145 5.7e-239 yhjE EGP MFS transporter, metabolite H symporter (MHS) family protein
JHODCLMD_00146 1.1e-127 IQ Dehydrogenase reductase
JHODCLMD_00147 1.4e-36
JHODCLMD_00148 1.8e-113 ywnB S NAD(P)H-binding
JHODCLMD_00149 1.9e-36 S Cytochrome b5-like Heme/Steroid binding domain
JHODCLMD_00150 1.2e-253 nhaC C Na H antiporter NhaC
JHODCLMD_00151 8.5e-182 P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JHODCLMD_00153 1e-96 ydeN S Serine hydrolase
JHODCLMD_00154 4.5e-62 psiE S Phosphate-starvation-inducible E
JHODCLMD_00155 5e-142 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
JHODCLMD_00157 7.7e-177 S Aldo keto reductase
JHODCLMD_00158 3.6e-77 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I PAP2 superfamily
JHODCLMD_00159 0.0 L Helicase C-terminal domain protein
JHODCLMD_00161 2.2e-246 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
JHODCLMD_00162 1.8e-53 S Sugar efflux transporter for intercellular exchange
JHODCLMD_00163 1.3e-128
JHODCLMD_00164 8.1e-126 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
JHODCLMD_00165 0.0 cadA P P-type ATPase
JHODCLMD_00166 1.2e-219 5.4.2.7 G Metalloenzyme superfamily
JHODCLMD_00168 1.1e-72 K Transcriptional regulator
JHODCLMD_00169 1.6e-163 proX M ABC transporter, substrate-binding protein, QAT family
JHODCLMD_00170 3.4e-107 proWZ P ABC transporter permease
JHODCLMD_00171 1.9e-141 proV E ABC transporter, ATP-binding protein
JHODCLMD_00172 1.9e-102 proW P ABC transporter, permease protein
JHODCLMD_00173 2e-79 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
JHODCLMD_00174 5.5e-178 norA EGP Major facilitator Superfamily
JHODCLMD_00175 8.9e-41 1.3.5.4 S FMN binding
JHODCLMD_00176 3.2e-118 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JHODCLMD_00177 1.7e-263 yfnA E amino acid
JHODCLMD_00178 1.5e-255 gabT 2.6.1.19 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JHODCLMD_00180 2.4e-204 napA P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
JHODCLMD_00181 0.0 helD 3.6.4.12 L DNA helicase
JHODCLMD_00182 6.3e-81 ndk 2.7.4.6 F Belongs to the NDK family
JHODCLMD_00183 8e-182 hpaIM 2.1.1.72 L Belongs to the N(4) N(6)-methyltransferase family
JHODCLMD_00184 7.7e-191 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
JHODCLMD_00185 4.6e-166 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
JHODCLMD_00186 1.1e-226 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
JHODCLMD_00187 1.9e-175
JHODCLMD_00188 4e-130 cobB K SIR2 family
JHODCLMD_00190 4.9e-159 yunF F Protein of unknown function DUF72
JHODCLMD_00191 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JHODCLMD_00192 3e-153 tatD L hydrolase, TatD family
JHODCLMD_00193 3.2e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JHODCLMD_00194 8.7e-159 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
JHODCLMD_00195 6.8e-37 veg S Biofilm formation stimulator VEG
JHODCLMD_00196 3.1e-161 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
JHODCLMD_00197 1.8e-167 znuA P Belongs to the bacterial solute-binding protein 9 family
JHODCLMD_00198 2.2e-122 fhuC P ABC transporter
JHODCLMD_00199 8.8e-126 znuB U ABC 3 transport family
JHODCLMD_00200 6.9e-150 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
JHODCLMD_00201 3.5e-239 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JHODCLMD_00202 6.1e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JHODCLMD_00203 9e-48
JHODCLMD_00204 2.1e-146 yxeH S hydrolase
JHODCLMD_00205 1e-270 ywfO S HD domain protein
JHODCLMD_00206 3.4e-149 lipL 2.3.1.200, 2.3.1.204 H biotin lipoate A B protein ligase
JHODCLMD_00207 1.2e-65 L PFAM transposase IS200-family protein
JHODCLMD_00208 8.9e-206 L transposase, IS605 OrfB family
JHODCLMD_00209 5.2e-53 ywiB S Domain of unknown function (DUF1934)
JHODCLMD_00210 8.7e-51 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
JHODCLMD_00211 2.2e-311 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
JHODCLMD_00212 4.9e-57 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
JHODCLMD_00213 2e-236 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JHODCLMD_00214 4.6e-41 rpmE2 J Ribosomal protein L31
JHODCLMD_00215 7.7e-236 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
JHODCLMD_00216 3.1e-164 S Alpha/beta hydrolase of unknown function (DUF915)
JHODCLMD_00217 7.3e-116 srtA 3.4.22.70 M sortase family
JHODCLMD_00218 9.8e-138 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
JHODCLMD_00219 1.3e-162 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
JHODCLMD_00220 8.6e-119 pgm3 3.1.3.73 G Belongs to the phosphoglycerate mutase family
JHODCLMD_00221 8e-87 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JHODCLMD_00222 7e-93 lemA S LemA family
JHODCLMD_00223 7.5e-158 htpX O Belongs to the peptidase M48B family
JHODCLMD_00224 1.3e-257 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
JHODCLMD_00225 3.6e-253 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
JHODCLMD_00226 2.2e-151 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
JHODCLMD_00227 2.5e-165 glsA 3.5.1.2 E Belongs to the glutaminase family
JHODCLMD_00228 8.5e-34 L PFAM transposase IS200-family protein
JHODCLMD_00229 7.2e-13 L PFAM transposase IS200-family protein
JHODCLMD_00230 1.9e-121 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
JHODCLMD_00231 2.1e-254 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
JHODCLMD_00232 1.7e-35 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JHODCLMD_00233 6.7e-234 dltB M MBOAT, membrane-bound O-acyltransferase family
JHODCLMD_00234 1.7e-295 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
JHODCLMD_00236 3.2e-59 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
JHODCLMD_00237 5.3e-209 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JHODCLMD_00238 9.4e-62 L Toxic component of a toxin-antitoxin (TA) module
JHODCLMD_00239 3.1e-251 U Belongs to the purine-cytosine permease (2.A.39) family
JHODCLMD_00240 2.3e-242 codA 3.5.4.1 F cytosine deaminase
JHODCLMD_00241 6.4e-145 tesE Q hydratase
JHODCLMD_00242 1.1e-113 S (CBS) domain
JHODCLMD_00243 1.3e-102 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
JHODCLMD_00244 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JHODCLMD_00245 2.1e-39 yabO J S4 domain protein
JHODCLMD_00246 8.1e-55 divIC D Septum formation initiator
JHODCLMD_00247 9.8e-67 yabR J RNA binding
JHODCLMD_00248 4.5e-250 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
JHODCLMD_00249 1.3e-96 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
JHODCLMD_00250 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JHODCLMD_00251 1.1e-169 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
JHODCLMD_00252 2.4e-189 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JHODCLMD_00253 1.6e-293 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
JHODCLMD_00254 3e-85
JHODCLMD_00255 1.7e-29
JHODCLMD_00256 4.4e-18
JHODCLMD_00257 4.3e-44
JHODCLMD_00259 6.1e-57
JHODCLMD_00262 1.3e-23 XK27_01125 L PFAM IS66 Orf2 family protein
JHODCLMD_00263 2.9e-279 L Transposase IS66 family
JHODCLMD_00268 1.3e-263 dtpT U amino acid peptide transporter
JHODCLMD_00269 1.1e-150 yjjH S Calcineurin-like phosphoesterase
JHODCLMD_00272 2.9e-111
JHODCLMD_00273 8.5e-249 EGP Major facilitator Superfamily
JHODCLMD_00274 7e-303 aspT P Predicted Permease Membrane Region
JHODCLMD_00275 8.2e-131 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
JHODCLMD_00276 1.8e-127 gntR1 K UbiC transcription regulator-associated domain protein
JHODCLMD_00277 3.1e-286 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JHODCLMD_00278 5.7e-152 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
JHODCLMD_00279 0.0 yhgF K Tex-like protein N-terminal domain protein
JHODCLMD_00280 1.5e-82 ydcK S Belongs to the SprT family
JHODCLMD_00282 0.0 lacL 3.2.1.23 G Belongs to the glycosyl hydrolase 2 family
JHODCLMD_00283 4.2e-183 lacM 3.2.1.23, 3.2.1.35, 3.2.1.51, 3.2.1.97 GH101,GH29 G beta-galactosidase
JHODCLMD_00284 0.0 S Bacterial membrane protein, YfhO
JHODCLMD_00285 6.6e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JHODCLMD_00286 1.7e-167 I alpha/beta hydrolase fold
JHODCLMD_00287 5e-215 metC 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
JHODCLMD_00288 1.1e-119 tcyB E ABC transporter
JHODCLMD_00289 2.2e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
JHODCLMD_00290 3.7e-140 tcyA ET Belongs to the bacterial solute-binding protein 3 family
JHODCLMD_00291 6.6e-267 pepC 3.4.22.40 E Peptidase C1-like family
JHODCLMD_00292 2.2e-125 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
JHODCLMD_00293 3.8e-50 HA62_12640 S GCN5-related N-acetyl-transferase
JHODCLMD_00294 3.6e-99 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
JHODCLMD_00295 7.8e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JHODCLMD_00296 1.1e-204 yacL S domain protein
JHODCLMD_00297 1.3e-273 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
JHODCLMD_00298 2.1e-70 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
JHODCLMD_00299 4.7e-137 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JHODCLMD_00300 1.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
JHODCLMD_00301 1.4e-15 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
JHODCLMD_00302 3.4e-97 nusG K Participates in transcription elongation, termination and antitermination
JHODCLMD_00303 3.7e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
JHODCLMD_00304 3e-122 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
JHODCLMD_00305 2.8e-224 aadAT EK Aminotransferase, class I
JHODCLMD_00307 1.8e-32 M Glycosyl transferase family group 2
JHODCLMD_00308 1.8e-142 M Glycosyl transferase family group 2
JHODCLMD_00309 3.4e-208 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
JHODCLMD_00310 1.7e-82 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
JHODCLMD_00311 3.2e-54 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
JHODCLMD_00312 1.4e-33
JHODCLMD_00314 3.2e-38 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
JHODCLMD_00315 1.2e-55 K transcriptional regulator PadR family
JHODCLMD_00316 2.1e-79 XK27_06920 S Protein of unknown function (DUF1700)
JHODCLMD_00317 1.9e-133 S Putative adhesin
JHODCLMD_00318 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
JHODCLMD_00319 2.2e-198 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JHODCLMD_00320 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JHODCLMD_00321 3.4e-35 nrdH O Glutaredoxin
JHODCLMD_00322 1e-87 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
JHODCLMD_00323 6.2e-292 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JHODCLMD_00324 7e-47 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
JHODCLMD_00325 6.3e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JHODCLMD_00326 2.8e-38 S Protein of unknown function (DUF2508)
JHODCLMD_00327 7.6e-112 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JHODCLMD_00328 2.9e-51 yaaQ S Cyclic-di-AMP receptor
JHODCLMD_00329 1.3e-182 holB 2.7.7.7 L DNA polymerase III
JHODCLMD_00330 3.1e-43 yabA L Involved in initiation control of chromosome replication
JHODCLMD_00331 2.4e-153 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JHODCLMD_00332 3.2e-133 fat 3.1.2.21 I Acyl-ACP thioesterase
JHODCLMD_00333 9.7e-283 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
JHODCLMD_00334 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
JHODCLMD_00335 6.4e-171 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
JHODCLMD_00336 6.8e-192 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
JHODCLMD_00337 2.6e-219 L PFAM Integrase catalytic region
JHODCLMD_00338 9.5e-127 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
JHODCLMD_00339 3.4e-100 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
JHODCLMD_00340 2e-194 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
JHODCLMD_00341 8e-132 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JHODCLMD_00342 9e-218 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
JHODCLMD_00343 8.4e-137 proB 2.7.2.11 F Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
JHODCLMD_00344 3.3e-141 mtnU 3.5.1.3 S Carbon-nitrogen hydrolase
JHODCLMD_00345 1.3e-226 mtnE 2.6.1.83 E Aminotransferase
JHODCLMD_00346 2.1e-182 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JHODCLMD_00347 2.7e-311 uup S ABC transporter, ATP-binding protein
JHODCLMD_00348 8.2e-114 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
JHODCLMD_00350 1.1e-43 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
JHODCLMD_00351 5.5e-292 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
JHODCLMD_00352 5.3e-81 S Aminoacyl-tRNA editing domain
JHODCLMD_00353 4.5e-302 ybeC E amino acid
JHODCLMD_00354 0.0 ydaO E amino acid
JHODCLMD_00355 2.7e-39
JHODCLMD_00356 5.6e-107 yvyE 3.4.13.9 S YigZ family
JHODCLMD_00357 3.6e-249 comFA L Helicase C-terminal domain protein
JHODCLMD_00358 3.9e-114 comFC S Competence protein
JHODCLMD_00359 4.5e-97 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
JHODCLMD_00360 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
JHODCLMD_00361 1.1e-186 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
JHODCLMD_00362 7.7e-31 KT PspC domain protein
JHODCLMD_00363 1.4e-51 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
JHODCLMD_00364 1.7e-176 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
JHODCLMD_00365 2.7e-154 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JHODCLMD_00366 8.5e-182 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
JHODCLMD_00367 9e-170 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
JHODCLMD_00368 1.7e-136 yrjD S LUD domain
JHODCLMD_00369 1.3e-292 lutB C 4Fe-4S dicluster domain
JHODCLMD_00370 7.8e-168 lutA C Cysteine-rich domain
JHODCLMD_00371 8.6e-173 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
JHODCLMD_00372 3e-148 argE 3.5.1.18 E succinyl-diaminopimelate desuccinylase
JHODCLMD_00373 2.9e-162 aatB ET PFAM extracellular solute-binding protein, family 3
JHODCLMD_00374 4.6e-88 ykhA 3.1.2.20 I Thioesterase superfamily
JHODCLMD_00375 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
JHODCLMD_00376 6.2e-116 yfbR S HD containing hydrolase-like enzyme
JHODCLMD_00377 6.9e-14
JHODCLMD_00378 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
JHODCLMD_00379 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
JHODCLMD_00380 1.2e-244 steT E amino acid
JHODCLMD_00381 4.9e-162 rapZ S Displays ATPase and GTPase activities
JHODCLMD_00382 2.1e-185 ybhK S Required for morphogenesis under gluconeogenic growth conditions
JHODCLMD_00383 1.5e-169 whiA K May be required for sporulation
JHODCLMD_00385 8.8e-15
JHODCLMD_00386 2.1e-103 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
JHODCLMD_00387 2.1e-49 L Transposase
JHODCLMD_00389 1.1e-189 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
JHODCLMD_00390 1.2e-227 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
JHODCLMD_00391 1.8e-141 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
JHODCLMD_00392 4.2e-250 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
JHODCLMD_00393 2.5e-113 L Transposase
JHODCLMD_00394 1.2e-244 yifK E Amino acid permease
JHODCLMD_00395 2.6e-291 clcA P chloride
JHODCLMD_00396 1.8e-34 secG U Preprotein translocase
JHODCLMD_00397 4.8e-145 est 3.1.1.1 S Serine aminopeptidase, S33
JHODCLMD_00398 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
JHODCLMD_00399 1.4e-83 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
JHODCLMD_00400 1.5e-103 yxjI
JHODCLMD_00401 1.8e-135 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
JHODCLMD_00402 3.8e-179 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
JHODCLMD_00403 6.5e-81 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
JHODCLMD_00404 1.5e-86 K Acetyltransferase (GNAT) domain
JHODCLMD_00405 4.4e-76 S PAS domain
JHODCLMD_00406 2.7e-102 dnaQ 2.7.7.7 L DNA polymerase III
JHODCLMD_00407 1.8e-167 murB 1.3.1.98 M Cell wall formation
JHODCLMD_00408 2.5e-164 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JHODCLMD_00409 1e-66 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
JHODCLMD_00410 3.1e-248 fucP G Major Facilitator Superfamily
JHODCLMD_00411 5e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JHODCLMD_00412 5.8e-126 ybbR S YbbR-like protein
JHODCLMD_00413 8.5e-254 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JHODCLMD_00414 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
JHODCLMD_00415 5.6e-52
JHODCLMD_00416 0.0 oatA I Acyltransferase
JHODCLMD_00417 1.8e-78 K Transcriptional regulator
JHODCLMD_00418 1.1e-147 XK27_02985 S Cof-like hydrolase
JHODCLMD_00419 1.3e-76 lytE M Lysin motif
JHODCLMD_00421 1.6e-134 K response regulator
JHODCLMD_00422 4.3e-267 yclK 2.7.13.3 T Histidine kinase
JHODCLMD_00423 4.1e-153 glcU U sugar transport
JHODCLMD_00424 2.2e-100 lacA 2.3.1.79 S Transferase hexapeptide repeat
JHODCLMD_00425 1e-262 pgi 5.3.1.9 G Belongs to the GPI family
JHODCLMD_00426 1.3e-25
JHODCLMD_00429 3.1e-30 xylB 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
JHODCLMD_00430 5.5e-33 L PFAM transposase IS200-family protein
JHODCLMD_00431 7.3e-12 L PFAM transposase IS200-family protein
JHODCLMD_00432 1.2e-154 KT YcbB domain
JHODCLMD_00433 7.6e-191 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
JHODCLMD_00434 3.6e-171 arcC 2.7.2.2 E Belongs to the carbamate kinase family
JHODCLMD_00435 3.9e-162 EG EamA-like transporter family
JHODCLMD_00436 6.5e-102 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
JHODCLMD_00437 1.1e-49 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
JHODCLMD_00438 0.0 copA 3.6.3.54 P P-type ATPase
JHODCLMD_00439 3.1e-86
JHODCLMD_00441 1.8e-56
JHODCLMD_00442 3.3e-197 yjcE P Sodium proton antiporter
JHODCLMD_00444 4.1e-56 L Transposase
JHODCLMD_00445 6.8e-57
JHODCLMD_00447 5.5e-68
JHODCLMD_00450 7.9e-140 L hmm pf00665
JHODCLMD_00451 1.2e-94 L Helix-turn-helix domain
JHODCLMD_00452 2.5e-32
JHODCLMD_00453 1.2e-183 ampC V Beta-lactamase
JHODCLMD_00454 2e-217 arcA 3.5.3.6 E Arginine
JHODCLMD_00455 2.7e-79 argR K Regulates arginine biosynthesis genes
JHODCLMD_00456 5.4e-259 E Arginine ornithine antiporter
JHODCLMD_00457 6.1e-223 arcD U Amino acid permease
JHODCLMD_00458 6.8e-10
JHODCLMD_00459 1.2e-134 cobQ S CobB/CobQ-like glutamine amidotransferase domain
JHODCLMD_00460 1.3e-262 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain
JHODCLMD_00461 6e-108 tdk 2.7.1.21 F thymidine kinase
JHODCLMD_00462 1.2e-194 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JHODCLMD_00463 2.5e-166 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
JHODCLMD_00464 5.2e-195 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
JHODCLMD_00465 1e-229 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JHODCLMD_00466 6.6e-116 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
JHODCLMD_00467 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JHODCLMD_00468 1.9e-190 yibE S overlaps another CDS with the same product name
JHODCLMD_00469 4.4e-130 yibF S overlaps another CDS with the same product name
JHODCLMD_00470 7.7e-233 pyrP F Permease
JHODCLMD_00471 7.3e-124 atpB C it plays a direct role in the translocation of protons across the membrane
JHODCLMD_00472 1.5e-14 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JHODCLMD_00473 1.1e-57 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JHODCLMD_00474 5.1e-93 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JHODCLMD_00475 1.5e-283 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
JHODCLMD_00476 7.4e-164 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JHODCLMD_00477 1.1e-267 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JHODCLMD_00478 1.1e-66 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
JHODCLMD_00479 1.3e-33 ywzB S Protein of unknown function (DUF1146)
JHODCLMD_00480 3.6e-241 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
JHODCLMD_00481 1.9e-178 mbl D Cell shape determining protein MreB Mrl
JHODCLMD_00482 4.4e-41 yidD S Could be involved in insertion of integral membrane proteins into the membrane
JHODCLMD_00483 1e-31 S Protein of unknown function (DUF2969)
JHODCLMD_00484 1.1e-220 rodA D Belongs to the SEDS family
JHODCLMD_00485 1.4e-47 gcvH E glycine cleavage
JHODCLMD_00486 3.4e-216 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
JHODCLMD_00487 1.5e-147 2.3.1.19 K Helix-turn-helix XRE-family like proteins
JHODCLMD_00488 1.4e-259 araP U Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family
JHODCLMD_00489 0.0 araB 2.7.1.12, 2.7.1.16 G carbohydrate kinase FGGY
JHODCLMD_00490 1.4e-138 araD 4.1.2.17, 5.1.3.4 G links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
JHODCLMD_00491 2.2e-284 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
JHODCLMD_00492 2.2e-50 maa 2.3.1.79 S Maltose O-acetyltransferase
JHODCLMD_00493 9.2e-29 maa 2.3.1.79 S Maltose O-acetyltransferase
JHODCLMD_00494 7.3e-155 ytbE 1.1.1.346 S Aldo keto reductase
JHODCLMD_00495 1.4e-203 araR K Transcriptional regulator
JHODCLMD_00496 4.3e-83 usp6 T universal stress protein
JHODCLMD_00497 1.7e-45
JHODCLMD_00498 7.9e-233 rarA L recombination factor protein RarA
JHODCLMD_00499 5.1e-84 yueI S Protein of unknown function (DUF1694)
JHODCLMD_00500 8e-21
JHODCLMD_00501 6.8e-74 4.4.1.5 E Glyoxalase
JHODCLMD_00502 1.4e-136 S Membrane
JHODCLMD_00503 1.1e-138 S Belongs to the UPF0246 family
JHODCLMD_00504 6.8e-30 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
JHODCLMD_00505 6.8e-116 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
JHODCLMD_00506 7.8e-70 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
JHODCLMD_00507 1.7e-31 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
JHODCLMD_00508 7.2e-13 L PFAM transposase IS200-family protein
JHODCLMD_00509 8.5e-34 L PFAM transposase IS200-family protein
JHODCLMD_00510 1e-262 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
JHODCLMD_00511 3.7e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
JHODCLMD_00512 3.4e-244 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
JHODCLMD_00513 2.3e-215 iscS2 2.8.1.7 E Aminotransferase class V
JHODCLMD_00514 3.2e-228 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JHODCLMD_00515 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
JHODCLMD_00516 1.5e-272 cydA 1.10.3.14 C ubiquinol oxidase
JHODCLMD_00517 4.5e-183 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
JHODCLMD_00518 4.7e-311 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
JHODCLMD_00519 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
JHODCLMD_00520 1.8e-231 ndh 1.6.99.3 C NADH dehydrogenase
JHODCLMD_00521 2.5e-242 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
JHODCLMD_00522 8e-122 radC L DNA repair protein
JHODCLMD_00523 1.7e-179 mreB D cell shape determining protein MreB
JHODCLMD_00524 3.5e-152 mreC M Involved in formation and maintenance of cell shape
JHODCLMD_00525 8.7e-93 mreD M rod shape-determining protein MreD
JHODCLMD_00527 3.2e-102 glnP P ABC transporter permease
JHODCLMD_00528 1.2e-117 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
JHODCLMD_00529 1.9e-158 aatB ET ABC transporter substrate-binding protein
JHODCLMD_00530 8.1e-227 ymfF S Peptidase M16 inactive domain protein
JHODCLMD_00531 2.5e-247 ymfH S Peptidase M16
JHODCLMD_00532 1.7e-137 ymfM S Helix-turn-helix domain
JHODCLMD_00533 2.5e-101 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JHODCLMD_00534 1.4e-226 cinA 3.5.1.42 S Belongs to the CinA family
JHODCLMD_00535 1.9e-195 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
JHODCLMD_00536 9.5e-209 rny S Endoribonuclease that initiates mRNA decay
JHODCLMD_00537 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JHODCLMD_00538 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
JHODCLMD_00539 4.3e-101 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
JHODCLMD_00540 6.5e-190 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
JHODCLMD_00541 2.2e-188 tgt_1 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
JHODCLMD_00542 6.2e-31 yajC U Preprotein translocase
JHODCLMD_00543 3.2e-183 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
JHODCLMD_00544 1.7e-233 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
JHODCLMD_00545 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JHODCLMD_00546 4.1e-43 yrzL S Belongs to the UPF0297 family
JHODCLMD_00547 3.6e-76 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JHODCLMD_00548 6.1e-48 yrzB S Belongs to the UPF0473 family
JHODCLMD_00549 1.6e-86 cvpA S Colicin V production protein
JHODCLMD_00550 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
JHODCLMD_00551 6.1e-54 trxA O Belongs to the thioredoxin family
JHODCLMD_00552 1.6e-97 yslB S Protein of unknown function (DUF2507)
JHODCLMD_00553 3.1e-147 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
JHODCLMD_00554 2.8e-105 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
JHODCLMD_00555 3.8e-93 S Phosphoesterase
JHODCLMD_00556 1.1e-74 ykuL S (CBS) domain
JHODCLMD_00557 1.8e-153 3.1.3.102, 3.1.3.104, 3.1.3.23 S haloacid dehalogenase-like hydrolase
JHODCLMD_00558 6.9e-148 ykuT M mechanosensitive ion channel
JHODCLMD_00559 9.4e-37 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
JHODCLMD_00560 4.3e-16
JHODCLMD_00561 1.1e-195 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
JHODCLMD_00562 7.1e-181 ccpA K catabolite control protein A
JHODCLMD_00563 1e-132
JHODCLMD_00564 5.9e-132 yebC K Transcriptional regulatory protein
JHODCLMD_00565 1.3e-182 comGA NU Type II IV secretion system protein
JHODCLMD_00566 3e-182 comGB NU type II secretion system
JHODCLMD_00567 7.1e-47 comGC U competence protein ComGC
JHODCLMD_00568 4.1e-77 NU general secretion pathway protein
JHODCLMD_00569 1e-67
JHODCLMD_00571 7e-150 ytxK 2.1.1.72 L N-6 DNA Methylase
JHODCLMD_00572 1.3e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JHODCLMD_00573 4.7e-111 S Calcineurin-like phosphoesterase
JHODCLMD_00574 6.6e-93 yutD S Protein of unknown function (DUF1027)
JHODCLMD_00575 9.4e-133 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
JHODCLMD_00576 2.8e-101 S Protein of unknown function (DUF1461)
JHODCLMD_00577 6.1e-109 dedA S SNARE-like domain protein
JHODCLMD_00578 1.7e-29
JHODCLMD_00579 4.4e-18
JHODCLMD_00580 4.3e-44
JHODCLMD_00582 6.1e-57
JHODCLMD_00602 2.5e-236 L Transposase
JHODCLMD_00603 8.8e-76 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
JHODCLMD_00604 2.7e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
JHODCLMD_00605 6.7e-119 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
JHODCLMD_00606 1.8e-195 coiA 3.6.4.12 S Competence protein
JHODCLMD_00607 6.8e-267 pipD E Dipeptidase
JHODCLMD_00608 3.1e-113 yjbH Q Thioredoxin
JHODCLMD_00609 2e-115 yjbM 2.7.6.5 S RelA SpoT domain protein
JHODCLMD_00610 5.1e-153 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
JHODCLMD_00611 1.6e-171 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 G Responsible for synthesis of pseudouridine from uracil
JHODCLMD_00612 1.7e-29
JHODCLMD_00613 4.4e-18
JHODCLMD_00614 4.3e-44
JHODCLMD_00616 6.1e-57
JHODCLMD_00617 1.9e-186 L Transposase IS66 family
JHODCLMD_00618 1.8e-96 L Transposase IS66 family
JHODCLMD_00619 2.7e-66 XK27_01125 L PFAM IS66 Orf2 family protein
JHODCLMD_00621 5e-182 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
JHODCLMD_00622 2.5e-158 rrmA 2.1.1.187 H Methyltransferase
JHODCLMD_00623 3e-95 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
JHODCLMD_00624 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
JHODCLMD_00625 1.2e-10 S Protein of unknown function (DUF4044)
JHODCLMD_00626 1.7e-57
JHODCLMD_00627 3.1e-77 mraZ K Belongs to the MraZ family
JHODCLMD_00628 1.5e-172 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
JHODCLMD_00629 1.3e-55 ftsL D Cell division protein FtsL
JHODCLMD_00630 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
JHODCLMD_00631 2.2e-179 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JHODCLMD_00632 5e-262 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JHODCLMD_00633 1.6e-202 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JHODCLMD_00634 2.1e-141 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
JHODCLMD_00635 7.3e-253 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
JHODCLMD_00636 3.5e-222 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JHODCLMD_00637 2.1e-70 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
JHODCLMD_00638 3.2e-40 yggT S YGGT family
JHODCLMD_00639 2.2e-145 ylmH S S4 domain protein
JHODCLMD_00640 3e-35 divIVA D DivIVA domain protein
JHODCLMD_00641 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JHODCLMD_00642 4.2e-32 cspA K Cold shock protein
JHODCLMD_00643 1.1e-98 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
JHODCLMD_00645 1.6e-123 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JHODCLMD_00646 1.6e-216 iscS 2.8.1.7 E Aminotransferase class V
JHODCLMD_00647 7.5e-58 XK27_04120 S Putative amino acid metabolism
JHODCLMD_00648 2.2e-223 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
JHODCLMD_00649 2.9e-122 pgm6 5.4.2.11, 5.4.2.12 G phosphoglycerate mutase
JHODCLMD_00650 1.9e-116 S Repeat protein
JHODCLMD_00651 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
JHODCLMD_00652 6.9e-173 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
JHODCLMD_00653 3.2e-181 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
JHODCLMD_00654 2.3e-259 lysC 2.7.2.4 E Belongs to the aspartokinase family
JHODCLMD_00655 6.9e-245 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
JHODCLMD_00656 7e-74 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
JHODCLMD_00657 1.1e-222 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
JHODCLMD_00658 1e-173 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JHODCLMD_00659 4.3e-141 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
JHODCLMD_00660 1.1e-217 patA 2.6.1.1 E Aminotransferase
JHODCLMD_00661 1e-198 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JHODCLMD_00662 8.5e-84 KT Putative sugar diacid recognition
JHODCLMD_00663 1.1e-218 EG GntP family permease
JHODCLMD_00664 6e-208 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
JHODCLMD_00665 2.2e-57
JHODCLMD_00667 5.8e-66 mltD CBM50 M NlpC P60 family protein
JHODCLMD_00668 5.7e-29
JHODCLMD_00669 6.7e-181 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic
JHODCLMD_00670 9.8e-32 ykzG S Belongs to the UPF0356 family
JHODCLMD_00671 4.8e-79
JHODCLMD_00672 1.4e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
JHODCLMD_00673 2.8e-207 pdhA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
JHODCLMD_00674 2.4e-181 pdhB 1.2.4.1 C Transketolase, C-terminal domain protein
JHODCLMD_00675 1.7e-222 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
JHODCLMD_00676 1.4e-275 lpdA 1.8.1.4 C Dehydrogenase
JHODCLMD_00677 3.7e-45 yktA S Belongs to the UPF0223 family
JHODCLMD_00678 3.2e-133 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
JHODCLMD_00679 0.0 typA T GTP-binding protein TypA
JHODCLMD_00680 2.7e-222 ftsW D Belongs to the SEDS family
JHODCLMD_00681 3e-44 ylbG S Uncharacterized protein conserved in bacteria (DUF2129)
JHODCLMD_00682 1.6e-97 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
JHODCLMD_00683 5.1e-90 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JHODCLMD_00684 1.9e-197 ylbL T Belongs to the peptidase S16 family
JHODCLMD_00685 5.8e-80 comEA L Competence protein ComEA
JHODCLMD_00686 3.1e-89 comEB 3.5.4.12 F ComE operon protein 2
JHODCLMD_00687 0.0 comEC S Competence protein ComEC
JHODCLMD_00688 6.9e-147 holA 2.7.7.7 L DNA polymerase III delta subunit
JHODCLMD_00689 5.1e-35 rpsT J Binds directly to 16S ribosomal RNA
JHODCLMD_00690 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
JHODCLMD_00691 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JHODCLMD_00692 7.1e-164 S Tetratricopeptide repeat
JHODCLMD_00693 3.8e-226 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JHODCLMD_00694 2.8e-238 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
JHODCLMD_00695 3.1e-234 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
JHODCLMD_00696 4e-107 engB D Necessary for normal cell division and for the maintenance of normal septation
JHODCLMD_00697 1.8e-59 MA20_27270 S mazG nucleotide pyrophosphohydrolase
JHODCLMD_00698 4.9e-08
JHODCLMD_00699 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
JHODCLMD_00700 5.2e-248 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
JHODCLMD_00701 4.9e-176 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
JHODCLMD_00702 2.1e-154 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
JHODCLMD_00704 4.3e-126 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JHODCLMD_00705 3.5e-208 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
JHODCLMD_00706 5.5e-115 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JHODCLMD_00707 1.3e-35 ynzC S UPF0291 protein
JHODCLMD_00708 9.8e-30 yneF S Uncharacterised protein family (UPF0154)
JHODCLMD_00709 3.1e-117 plsC 2.3.1.51 I Acyltransferase
JHODCLMD_00710 2.7e-140 yabB 2.1.1.223 L Methyltransferase small domain
JHODCLMD_00711 7.1e-49 yazA L GIY-YIG catalytic domain protein
JHODCLMD_00712 7e-181 ldhD 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JHODCLMD_00713 4.6e-143 rpsB J Belongs to the universal ribosomal protein uS2 family
JHODCLMD_00714 2.7e-152 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JHODCLMD_00715 8.2e-129 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
JHODCLMD_00716 9.1e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
JHODCLMD_00717 7.2e-13 L PFAM transposase IS200-family protein
JHODCLMD_00718 8.5e-34 L PFAM transposase IS200-family protein
JHODCLMD_00719 2.4e-141 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
JHODCLMD_00720 5.8e-138 cdsA 2.7.7.41 I Belongs to the CDS family
JHODCLMD_00721 3.7e-235 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
JHODCLMD_00722 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
JHODCLMD_00723 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JHODCLMD_00724 9.4e-83 rimP J Required for maturation of 30S ribosomal subunits
JHODCLMD_00725 2.3e-215 nusA K Participates in both transcription termination and antitermination
JHODCLMD_00726 1e-44 ylxR K Protein of unknown function (DUF448)
JHODCLMD_00727 1.3e-48 ylxQ J ribosomal protein
JHODCLMD_00728 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
JHODCLMD_00729 2.1e-58 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JHODCLMD_00730 2.1e-163 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JHODCLMD_00731 4.5e-177 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
JHODCLMD_00732 2.9e-63
JHODCLMD_00733 1e-193 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
JHODCLMD_00734 1e-75 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
JHODCLMD_00735 0.0 dnaK O Heat shock 70 kDa protein
JHODCLMD_00736 2.5e-198 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
JHODCLMD_00737 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
JHODCLMD_00738 2.3e-127 pipD E Dipeptidase
JHODCLMD_00739 7.5e-109 pipD E Dipeptidase
JHODCLMD_00740 3.6e-199 mdh 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
JHODCLMD_00741 1.2e-172 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
JHODCLMD_00743 7.5e-58
JHODCLMD_00744 6.3e-179 prmA J Ribosomal protein L11 methyltransferase
JHODCLMD_00745 6.7e-128 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
JHODCLMD_00746 8.5e-51
JHODCLMD_00747 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JHODCLMD_00748 8.4e-78 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
JHODCLMD_00749 9.3e-166 yniA G Phosphotransferase enzyme family
JHODCLMD_00750 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
JHODCLMD_00751 7.2e-13 L PFAM transposase IS200-family protein
JHODCLMD_00752 8.5e-34 L PFAM transposase IS200-family protein
JHODCLMD_00753 7.7e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
JHODCLMD_00754 7.2e-262 glnPH2 P ABC transporter permease
JHODCLMD_00755 1.2e-23 rpsU J Belongs to the bacterial ribosomal protein bS21 family
JHODCLMD_00756 3.8e-70 yqeY S YqeY-like protein
JHODCLMD_00757 4.9e-187 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
JHODCLMD_00758 1.7e-237 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
JHODCLMD_00759 7.8e-263 argH 4.3.2.1 E argininosuccinate lyase
JHODCLMD_00760 1.5e-82 bioY S BioY family
JHODCLMD_00761 2.2e-171 birA 6.3.4.15 H Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
JHODCLMD_00762 5.5e-181 phoH T phosphate starvation-inducible protein PhoH
JHODCLMD_00763 3.3e-83 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JHODCLMD_00764 6e-59 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
JHODCLMD_00765 1.5e-169 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JHODCLMD_00766 5.8e-146 recO L Involved in DNA repair and RecF pathway recombination
JHODCLMD_00767 2e-180 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
JHODCLMD_00768 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
JHODCLMD_00769 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
JHODCLMD_00770 7.7e-208 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
JHODCLMD_00771 2.4e-220 patA 2.6.1.1 E Aminotransferase
JHODCLMD_00772 1.4e-122 trmK 2.1.1.217 S SAM-dependent methyltransferase
JHODCLMD_00773 6.5e-156 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JHODCLMD_00774 7.3e-236 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
JHODCLMD_00775 2.3e-37 S Protein of unknown function (DUF2929)
JHODCLMD_00776 0.0 dnaE 2.7.7.7 L DNA polymerase
JHODCLMD_00777 3.6e-271 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
JHODCLMD_00778 9.3e-169 cvfB S S1 domain
JHODCLMD_00779 1.5e-161 xerD D recombinase XerD
JHODCLMD_00780 2.8e-63 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
JHODCLMD_00781 2.5e-136 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JHODCLMD_00782 6.5e-105 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JHODCLMD_00783 5.9e-129 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
JHODCLMD_00784 5.5e-101 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
JHODCLMD_00785 3.7e-193 ypbB 5.1.3.1 S Helix-turn-helix domain
JHODCLMD_00786 6.4e-268 recQ1 3.6.4.12 L ATP-dependent DNA helicase RecQ
JHODCLMD_00787 2.5e-13 M Lysin motif
JHODCLMD_00788 3.8e-117 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
JHODCLMD_00789 1.4e-205 rpsA 1.17.7.4 J Ribosomal protein S1
JHODCLMD_00790 9.4e-250 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
JHODCLMD_00791 2.6e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
JHODCLMD_00792 1.4e-234 S Tetratricopeptide repeat protein
JHODCLMD_00793 8.2e-224 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
JHODCLMD_00794 0.0 yfmR S ABC transporter, ATP-binding protein
JHODCLMD_00795 2.1e-190 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
JHODCLMD_00796 2.8e-90 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
JHODCLMD_00797 5e-111 hlyIII S protein, hemolysin III
JHODCLMD_00798 8.3e-168 ypmR E lipolytic protein G-D-S-L family
JHODCLMD_00799 6.3e-108 ypmS S Uncharacterized protein conserved in bacteria (DUF2140)
JHODCLMD_00800 4.4e-35 yozE S Belongs to the UPF0346 family
JHODCLMD_00801 1.6e-160 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JHODCLMD_00802 5.1e-139 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JHODCLMD_00803 2.1e-160 dprA LU DNA protecting protein DprA
JHODCLMD_00804 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JHODCLMD_00805 5.3e-164 lacX 5.1.3.3 G Aldose 1-epimerase
JHODCLMD_00806 1.2e-104 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
JHODCLMD_00807 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
JHODCLMD_00808 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
JHODCLMD_00809 8.1e-79 F NUDIX domain
JHODCLMD_00810 1.1e-172 ppaC 3.6.1.1 C inorganic pyrophosphatase
JHODCLMD_00811 9.5e-110 L PFAM Integrase catalytic region
JHODCLMD_00812 2e-16 L PFAM Integrase catalytic region
JHODCLMD_00813 2.7e-67 yqkB S Belongs to the HesB IscA family
JHODCLMD_00814 5.6e-26
JHODCLMD_00816 6.1e-85 ywnH 2.3.1.183 M Acetyltransferase (GNAT) domain
JHODCLMD_00817 3.7e-61 asp S Asp23 family, cell envelope-related function
JHODCLMD_00818 2.8e-25
JHODCLMD_00819 8e-94
JHODCLMD_00820 5.9e-288 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
JHODCLMD_00821 4.9e-182 K Transcriptional regulator, LacI family
JHODCLMD_00822 2.4e-204 gntT EG Gluconate
JHODCLMD_00829 2.5e-118 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
JHODCLMD_00830 2e-15 gntT EG Gluconate
JHODCLMD_00831 1.5e-294 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
JHODCLMD_00832 2.9e-96 K Acetyltransferase (GNAT) domain
JHODCLMD_00833 3.5e-46
JHODCLMD_00834 2.4e-22
JHODCLMD_00835 2.2e-44
JHODCLMD_00836 1.2e-56 yhaI S Protein of unknown function (DUF805)
JHODCLMD_00837 3.3e-103 T Ion transport 2 domain protein
JHODCLMD_00838 0.0 S Bacterial membrane protein YfhO
JHODCLMD_00839 7.3e-201 G Transporter, major facilitator family protein
JHODCLMD_00840 1.2e-103 yvrI K sigma factor activity
JHODCLMD_00841 3e-60 ydiI Q Thioesterase superfamily
JHODCLMD_00842 2.9e-156 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
JHODCLMD_00843 2e-269 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
JHODCLMD_00844 1.3e-17
JHODCLMD_00845 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
JHODCLMD_00846 2.8e-31 feoA P FeoA domain
JHODCLMD_00847 1.2e-143 sufC O FeS assembly ATPase SufC
JHODCLMD_00848 4.6e-241 sufD O FeS assembly protein SufD
JHODCLMD_00849 6.8e-234 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JHODCLMD_00850 1.2e-79 nifU C SUF system FeS assembly protein, NifU family
JHODCLMD_00851 4.2e-272 sufB O assembly protein SufB
JHODCLMD_00852 2.8e-57 yitW S Iron-sulfur cluster assembly protein
JHODCLMD_00853 5.2e-159 hipB K Helix-turn-helix
JHODCLMD_00854 3.4e-115 nreC K PFAM regulatory protein LuxR
JHODCLMD_00856 6e-38 S Cytochrome B5
JHODCLMD_00857 7.1e-155 yitU 3.1.3.104 S hydrolase
JHODCLMD_00858 4.2e-261 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
JHODCLMD_00859 6.8e-148 f42a O Band 7 protein
JHODCLMD_00860 0.0 lytS 2.7.13.3 T LytS YhcK-type transmembrane receptor domain protein
JHODCLMD_00861 1.1e-130 lytT K response regulator receiver
JHODCLMD_00862 1.9e-66 lrgA S LrgA family
JHODCLMD_00863 1.3e-123 lrgB M LrgB-like family
JHODCLMD_00864 3.2e-178 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
JHODCLMD_00865 1.1e-169 scrK 2.7.1.2, 2.7.1.4 GK ROK family
JHODCLMD_00866 1.8e-187 galR K Periplasmic binding protein-like domain
JHODCLMD_00867 0.0 rafA 3.2.1.22 G alpha-galactosidase
JHODCLMD_00868 1.9e-89 S Protein of unknown function (DUF1440)
JHODCLMD_00869 6.4e-193 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
JHODCLMD_00870 1.6e-213 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
JHODCLMD_00871 1.8e-168 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
JHODCLMD_00872 3.9e-173 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
JHODCLMD_00873 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
JHODCLMD_00874 2e-86 ypmB S Protein conserved in bacteria
JHODCLMD_00875 8.9e-122 dnaD L DnaD domain protein
JHODCLMD_00876 8.8e-162 EG EamA-like transporter family
JHODCLMD_00877 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
JHODCLMD_00878 9.8e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
JHODCLMD_00879 9.2e-101 ypsA S Belongs to the UPF0398 family
JHODCLMD_00880 3.8e-44 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
JHODCLMD_00881 7.7e-85 F Belongs to the NrdI family
JHODCLMD_00882 3e-223 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
JHODCLMD_00883 1.8e-71 rnhA 3.1.26.4 L Ribonuclease HI
JHODCLMD_00884 1.5e-65 esbA S Family of unknown function (DUF5322)
JHODCLMD_00885 4.1e-72 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
JHODCLMD_00886 4.5e-174 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
JHODCLMD_00887 9.6e-208 carA 6.3.5.5 F Belongs to the CarA family
JHODCLMD_00888 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
JHODCLMD_00889 0.0 FbpA K Fibronectin-binding protein
JHODCLMD_00890 4.6e-161 degV S EDD domain protein, DegV family
JHODCLMD_00891 9.4e-94
JHODCLMD_00892 5.6e-118 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
JHODCLMD_00893 6e-157 gspA M family 8
JHODCLMD_00894 4.4e-160 S Alpha beta hydrolase
JHODCLMD_00895 4.8e-96 K Acetyltransferase (GNAT) domain
JHODCLMD_00896 1e-262 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
JHODCLMD_00897 5.1e-102 XK27_08635 S UPF0210 protein
JHODCLMD_00898 7.5e-25 XK27_08635 S UPF0210 protein
JHODCLMD_00899 4.7e-39 gcvR T Belongs to the UPF0237 family
JHODCLMD_00901 2.1e-168 1.1.1.346 C Aldo keto reductase
JHODCLMD_00902 1.5e-158 K LysR substrate binding domain protein
JHODCLMD_00903 8.5e-84 C Flavodoxin
JHODCLMD_00904 2.1e-78 yphH S Cupin domain
JHODCLMD_00905 1.7e-73 yeaL S UPF0756 membrane protein
JHODCLMD_00906 4.3e-245 EGP Major facilitator Superfamily
JHODCLMD_00907 1.6e-73 copY K Copper transport repressor CopY TcrY
JHODCLMD_00908 8.5e-246 yhdP S Transporter associated domain
JHODCLMD_00909 0.0 ubiB S ABC1 family
JHODCLMD_00910 3.6e-143 S DUF218 domain
JHODCLMD_00911 7e-68 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
JHODCLMD_00912 5.4e-57 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JHODCLMD_00913 8.5e-54 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JHODCLMD_00914 0.0 uvrA3 L excinuclease ABC, A subunit
JHODCLMD_00915 1e-122 S SNARE associated Golgi protein
JHODCLMD_00916 1e-229 N Uncharacterized conserved protein (DUF2075)
JHODCLMD_00917 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JHODCLMD_00919 6.6e-254 yifK E Amino acid permease
JHODCLMD_00920 7.2e-158 endA V DNA/RNA non-specific endonuclease
JHODCLMD_00921 0.0 I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JHODCLMD_00922 1e-262 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
JHODCLMD_00923 2.3e-41 ybaN S Protein of unknown function (DUF454)
JHODCLMD_00924 4.5e-71 S Protein of unknown function (DUF3290)
JHODCLMD_00925 4.7e-114 yviA S Protein of unknown function (DUF421)
JHODCLMD_00926 2.9e-159 S Alpha/beta hydrolase of unknown function (DUF915)
JHODCLMD_00927 2e-18
JHODCLMD_00928 1.1e-89 ntd 2.4.2.6 F Nucleoside
JHODCLMD_00929 2.4e-150 3.1.3.102, 3.1.3.104 S hydrolase
JHODCLMD_00930 8.9e-41 yrvD S Pfam:DUF1049
JHODCLMD_00932 5e-47 L Belongs to the 'phage' integrase family
JHODCLMD_00933 3e-21 S Phage derived protein Gp49-like (DUF891)
JHODCLMD_00936 7.3e-12 L PFAM transposase IS200-family protein
JHODCLMD_00937 1.2e-28 L PFAM transposase IS200-family protein
JHODCLMD_00938 2.2e-176 I alpha/beta hydrolase fold
JHODCLMD_00939 5.3e-113 frnE Q DSBA-like thioredoxin domain
JHODCLMD_00940 4e-15
JHODCLMD_00949 5.7e-130 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
JHODCLMD_00950 1.7e-134 accA 2.1.3.15, 6.4.1.2 I alpha subunit
JHODCLMD_00951 2.5e-142 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
JHODCLMD_00952 1.7e-257 accC 6.3.4.14, 6.4.1.2 I Acetyl-CoA carboxylase biotin carboxylase subunit
JHODCLMD_00953 8.6e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
JHODCLMD_00954 5.8e-74 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
JHODCLMD_00955 1.2e-222 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
JHODCLMD_00956 4.5e-124 IQ reductase
JHODCLMD_00957 5.5e-151 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
JHODCLMD_00958 3e-32 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
JHODCLMD_00959 1.5e-167 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JHODCLMD_00960 1.2e-76 marR K Transcriptional regulator, MarR family
JHODCLMD_00961 2.3e-75 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
JHODCLMD_00963 5.2e-198 xerS L Belongs to the 'phage' integrase family
JHODCLMD_00965 4e-201 L PFAM Integrase catalytic region
JHODCLMD_00966 3e-156 rssA S Phospholipase, patatin family
JHODCLMD_00967 9.4e-118 L Integrase
JHODCLMD_00968 4.2e-153 EG EamA-like transporter family
JHODCLMD_00969 9.9e-110 L Transposase
JHODCLMD_00970 9.6e-129 narI 1.7.5.1 C Nitrate reductase
JHODCLMD_00971 8.7e-99 narJ C nitrate reductase molybdenum cofactor assembly chaperone
JHODCLMD_00972 0.0 narH 1.7.5.1 C 4Fe-4S dicluster domain
JHODCLMD_00973 0.0 narG 1.7.5.1 C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JHODCLMD_00974 4.1e-184 moeB 2.7.7.73, 2.7.7.80 H ThiF family
JHODCLMD_00975 2.6e-83 moaB 2.7.7.75 H May be involved in the biosynthesis of molybdopterin
JHODCLMD_00976 5.3e-223 moeA 2.10.1.1 H MoeA N-terminal region (domain I and II)
JHODCLMD_00977 3.3e-75 mobB 2.10.1.1, 2.7.7.77 H molybdopterin-guanine dinucleotide biosynthesis protein
JHODCLMD_00978 8.1e-97 mobA 2.7.7.77 H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
JHODCLMD_00979 2.6e-43
JHODCLMD_00980 2.7e-183 comP 2.7.13.3 F Sensor histidine kinase
JHODCLMD_00981 9.8e-115 nreC K PFAM regulatory protein LuxR
JHODCLMD_00982 2.5e-19
JHODCLMD_00983 4.4e-172
JHODCLMD_00984 1.1e-143 hepT 2.5.1.30, 2.5.1.90 H geranyltranstransferase activity
JHODCLMD_00985 1.5e-217 narK P Transporter, major facilitator family protein
JHODCLMD_00986 3.9e-32 moaD 2.8.1.12 H ThiS family
JHODCLMD_00987 3.5e-62 moaE 2.8.1.12 H MoaE protein
JHODCLMD_00988 2.5e-77 S Flavodoxin
JHODCLMD_00989 1.2e-129 fecD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JHODCLMD_00990 2.7e-135 fecE 3.6.3.34 HP AAA domain, putative AbiEii toxin, Type IV TA system
JHODCLMD_00991 5.3e-176 fecB P Periplasmic binding protein
JHODCLMD_00992 4e-141 L PFAM Integrase catalytic region
JHODCLMD_00993 4.1e-86 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
JHODCLMD_00994 3.3e-93 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
JHODCLMD_00995 9.2e-113 L PFAM Integrase catalytic region
JHODCLMD_00996 1.3e-16 L PFAM Integrase catalytic region
JHODCLMD_00997 2.5e-33 L PFAM transposase IS200-family protein
JHODCLMD_00998 7.2e-13 L PFAM transposase IS200-family protein
JHODCLMD_00999 9.8e-172
JHODCLMD_01000 1.1e-136 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
JHODCLMD_01001 2.4e-147 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
JHODCLMD_01002 7e-114 thiE 2.5.1.3 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
JHODCLMD_01003 1.7e-227 clcA_2 P Chloride transporter, ClC family
JHODCLMD_01004 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
JHODCLMD_01005 8.4e-111 lssY 3.6.1.27 I Acid phosphatase homologues
JHODCLMD_01007 3.1e-62 XK27_01125 L PFAM IS66 Orf2 family protein
JHODCLMD_01008 3.2e-281 L Transposase IS66 family
JHODCLMD_01009 6.1e-57
JHODCLMD_01011 4.3e-44
JHODCLMD_01012 4.4e-18
JHODCLMD_01013 1.7e-29
JHODCLMD_01014 1.2e-24
JHODCLMD_01015 1.5e-147
JHODCLMD_01016 4.3e-29
JHODCLMD_01017 9.8e-152 3.1.3.73 G Belongs to the phosphoglycerate mutase family
JHODCLMD_01018 4.7e-123 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
JHODCLMD_01019 3.3e-103 fic D Fic/DOC family
JHODCLMD_01020 2.8e-70
JHODCLMD_01021 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
JHODCLMD_01022 3.8e-16 L nuclease
JHODCLMD_01024 0.0 sbcC L Putative exonuclease SbcCD, C subunit
JHODCLMD_01025 8.7e-204 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
JHODCLMD_01026 5e-20 M Glycosyl hydrolases family 25
JHODCLMD_01027 3.7e-145 ywqE 3.1.3.48 GM PHP domain protein
JHODCLMD_01028 0.0 snf 2.7.11.1 KL domain protein
JHODCLMD_01029 1.5e-06 D nuclear chromosome segregation
JHODCLMD_01031 2.9e-249 mmuP E amino acid
JHODCLMD_01032 4.7e-171 mmuM 1.5.1.20, 2.1.1.10 H homocysteine S-methyltransferase
JHODCLMD_01033 1.1e-228 L transposase, IS605 OrfB family
JHODCLMD_01034 4.7e-67 L PFAM transposase IS200-family protein
JHODCLMD_01035 2.9e-32
JHODCLMD_01036 1.9e-291 glpK 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JHODCLMD_01037 2.7e-25 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
JHODCLMD_01038 5.1e-294 yjbQ P TrkA C-terminal domain protein
JHODCLMD_01039 1.1e-272 pipD E Dipeptidase
JHODCLMD_01040 0.0 trxB2 1.8.1.9 C Thioredoxin domain
JHODCLMD_01041 1.2e-105 ahpC 1.11.1.15 O Peroxiredoxin
JHODCLMD_01042 9.7e-142 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
JHODCLMD_01043 1.2e-120 sdaAB 4.3.1.17 E Serine dehydratase beta chain
JHODCLMD_01046 7e-43 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JHODCLMD_01047 1.7e-167 T Calcineurin-like phosphoesterase superfamily domain
JHODCLMD_01048 3.1e-223 mdtG EGP Major facilitator Superfamily
JHODCLMD_01049 6.8e-159 menA 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
JHODCLMD_01050 3.9e-176 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
JHODCLMD_01051 0.0 lacZ 3.2.1.23 G -beta-galactosidase
JHODCLMD_01052 0.0 lacS G Transporter
JHODCLMD_01053 4.8e-185 lacR K Transcriptional regulator
JHODCLMD_01054 3.8e-10
JHODCLMD_01055 6.4e-30
JHODCLMD_01056 1e-262 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
JHODCLMD_01057 3.3e-160 xth 3.1.11.2 L exodeoxyribonuclease III
JHODCLMD_01058 1.2e-52 S Mazg nucleotide pyrophosphohydrolase
JHODCLMD_01059 8.5e-34
JHODCLMD_01060 5.5e-33 L PFAM transposase IS200-family protein
JHODCLMD_01061 1.1e-12 L PFAM transposase IS200-family protein
JHODCLMD_01062 2.5e-54 hol S COG5546 Small integral membrane protein
JHODCLMD_01063 5.2e-32
JHODCLMD_01066 2.5e-33 L PFAM transposase IS200-family protein
JHODCLMD_01067 1.5e-12 L PFAM transposase IS200-family protein
JHODCLMD_01070 3.6e-64 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
JHODCLMD_01071 1.7e-260 yfnA E amino acid
JHODCLMD_01072 9.9e-143 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
JHODCLMD_01073 6.9e-92 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JHODCLMD_01074 5.4e-40 ylqC S Belongs to the UPF0109 family
JHODCLMD_01075 2.2e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
JHODCLMD_01076 1.8e-249 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JHODCLMD_01077 1.3e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
JHODCLMD_01078 3.8e-178 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
JHODCLMD_01079 0.0 smc D Required for chromosome condensation and partitioning
JHODCLMD_01080 1.2e-131 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
JHODCLMD_01081 2.9e-38 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
JHODCLMD_01082 1e-187 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
JHODCLMD_01083 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JHODCLMD_01084 0.0 yloV S DAK2 domain fusion protein YloV
JHODCLMD_01085 4.7e-58 asp S Asp23 family, cell envelope-related function
JHODCLMD_01086 7e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
JHODCLMD_01087 1.6e-120 thiN 2.7.6.2 H thiamine pyrophosphokinase
JHODCLMD_01088 4.2e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
JHODCLMD_01089 6.5e-162 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
JHODCLMD_01090 0.0 KLT serine threonine protein kinase
JHODCLMD_01091 2.1e-129 stp 3.1.3.16 T phosphatase
JHODCLMD_01092 3.8e-246 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JHODCLMD_01093 1.4e-173 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JHODCLMD_01094 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JHODCLMD_01095 2.4e-207 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JHODCLMD_01096 7.7e-32 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
JHODCLMD_01097 3.5e-114 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
JHODCLMD_01098 4.2e-53
JHODCLMD_01099 8e-262 recN L May be involved in recombinational repair of damaged DNA
JHODCLMD_01100 7.3e-77 argR K Regulates arginine biosynthesis genes
JHODCLMD_01101 1.7e-148 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
JHODCLMD_01102 4.9e-154 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
JHODCLMD_01103 1.3e-42 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
JHODCLMD_01104 1.2e-215 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
JHODCLMD_01105 8.8e-148 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
JHODCLMD_01106 6.8e-69 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JHODCLMD_01107 2.2e-70 yqhY S Asp23 family, cell envelope-related function
JHODCLMD_01108 5.5e-113 J 2'-5' RNA ligase superfamily
JHODCLMD_01109 9.5e-200 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
JHODCLMD_01110 8.4e-128 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JHODCLMD_01111 1.3e-44 rpmA J Belongs to the bacterial ribosomal protein bL27 family
JHODCLMD_01112 2.4e-53 ysxB J Cysteine protease Prp
JHODCLMD_01113 5.2e-50 rplU J This protein binds to 23S rRNA in the presence of protein L20
JHODCLMD_01114 6.4e-111 K Transcriptional regulator
JHODCLMD_01117 8.2e-85 dut S Protein conserved in bacteria
JHODCLMD_01118 3e-179
JHODCLMD_01119 9.7e-150
JHODCLMD_01120 4.8e-51 S Iron-sulfur cluster assembly protein
JHODCLMD_01121 1.2e-88 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JHODCLMD_01122 3.9e-12
JHODCLMD_01123 6.1e-42 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
JHODCLMD_01124 1e-31 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
JHODCLMD_01125 3.3e-95 patA 2.6.1.1, 2.6.1.57 E Aminotransferase
JHODCLMD_01126 4.5e-296 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JHODCLMD_01127 6.2e-265 glnA 6.3.1.2 E glutamine synthetase
JHODCLMD_01128 2.4e-175 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JHODCLMD_01129 5.9e-22 S Protein of unknown function (DUF3042)
JHODCLMD_01130 2.9e-66 yqhL P Rhodanese-like protein
JHODCLMD_01131 5.6e-183 glk 2.7.1.2 G Glucokinase
JHODCLMD_01132 7.4e-36 yqgQ S Bacterial protein of unknown function (DUF910)
JHODCLMD_01133 7.3e-20 gluP 3.4.21.105 S Peptidase, S54 family
JHODCLMD_01134 3.9e-76 gluP 3.4.21.105 S Peptidase, S54 family
JHODCLMD_01135 5.2e-101 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JHODCLMD_01136 4.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
JHODCLMD_01137 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
JHODCLMD_01138 0.0 S membrane
JHODCLMD_01139 4.1e-68 yneR S Belongs to the HesB IscA family
JHODCLMD_01140 5.9e-77 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
JHODCLMD_01141 8e-117 udk 2.7.1.48 F Cytidine monophosphokinase
JHODCLMD_01142 3.6e-114 rlpA M PFAM NLP P60 protein
JHODCLMD_01143 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
JHODCLMD_01144 2.3e-198 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JHODCLMD_01145 6.7e-59 yodB K Transcriptional regulator, HxlR family
JHODCLMD_01146 5.3e-92 XK27_09705 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
JHODCLMD_01147 1.8e-144 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JHODCLMD_01148 1e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
JHODCLMD_01149 5.9e-169 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
JHODCLMD_01150 5.6e-68 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
JHODCLMD_01151 2.9e-235 V MatE
JHODCLMD_01152 1.3e-266 yjeM E Amino Acid
JHODCLMD_01153 2.7e-274 arlS 2.7.13.3 T Histidine kinase
JHODCLMD_01154 1.5e-121 K response regulator
JHODCLMD_01155 1.1e-28 rpmF J Belongs to the bacterial ribosomal protein bL32 family
JHODCLMD_01156 2.9e-99 yceD S Uncharacterized ACR, COG1399
JHODCLMD_01157 4.1e-209 ylbM S Belongs to the UPF0348 family
JHODCLMD_01158 1.1e-135 yqeM Q Methyltransferase
JHODCLMD_01159 4.9e-60 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
JHODCLMD_01160 2.8e-111 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
JHODCLMD_01161 6.9e-121 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JHODCLMD_01162 1.9e-47 yhbY J RNA-binding protein
JHODCLMD_01163 2.1e-218 yqeH S Ribosome biogenesis GTPase YqeH
JHODCLMD_01164 1.4e-95 yqeG S HAD phosphatase, family IIIA
JHODCLMD_01165 3.3e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JHODCLMD_01166 2.3e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
JHODCLMD_01167 3.7e-85 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
JHODCLMD_01168 1.9e-172 dnaI L Primosomal protein DnaI
JHODCLMD_01169 3e-222 dnaB L replication initiation and membrane attachment
JHODCLMD_01170 1.9e-80 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JHODCLMD_01171 3.2e-96 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
JHODCLMD_01172 1.2e-157 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
JHODCLMD_01173 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JHODCLMD_01174 1e-15 yoaK S Protein of unknown function (DUF1275)
JHODCLMD_01175 7e-72 yoaK S Protein of unknown function (DUF1275)
JHODCLMD_01176 1.4e-119 ybhL S Belongs to the BI1 family
JHODCLMD_01177 3.8e-251 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
JHODCLMD_01178 1.1e-118 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
JHODCLMD_01179 1.8e-53 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
JHODCLMD_01180 1.1e-56 ytzB S Small secreted protein
JHODCLMD_01181 2.6e-11 glsA 3.5.1.2 E Belongs to the glutaminase family
JHODCLMD_01182 1.2e-55 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
JHODCLMD_01183 1.2e-120 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
JHODCLMD_01184 3.9e-218 ecsB U ABC transporter
JHODCLMD_01185 6.7e-136 ecsA V ABC transporter, ATP-binding protein
JHODCLMD_01186 1.2e-76 hit FG histidine triad
JHODCLMD_01188 8.5e-128 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
JHODCLMD_01189 0.0 L AAA domain
JHODCLMD_01190 1.1e-220 yhaO L Ser Thr phosphatase family protein
JHODCLMD_01191 2.7e-37 yheA S Belongs to the UPF0342 family
JHODCLMD_01192 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
JHODCLMD_01193 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
JHODCLMD_01194 2.1e-151 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
JHODCLMD_01195 4.2e-167 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
JHODCLMD_01197 1.3e-36
JHODCLMD_01198 1.4e-43
JHODCLMD_01199 5.6e-214 folP 2.5.1.15 H dihydropteroate synthase
JHODCLMD_01200 5.4e-104 xtp 2.5.1.15, 3.6.1.66 F Ham1 family
JHODCLMD_01201 3.9e-221 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
JHODCLMD_01202 3.4e-103 folE 2.7.6.3, 3.5.4.16 F GTP cyclohydrolase 1
JHODCLMD_01203 2.9e-90 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
JHODCLMD_01204 2.6e-55 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JHODCLMD_01205 8.4e-69
JHODCLMD_01207 1.9e-43
JHODCLMD_01208 3.2e-116 S CAAX protease self-immunity
JHODCLMD_01209 1.8e-31
JHODCLMD_01210 6.8e-162 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JHODCLMD_01211 1.5e-186 rbsR K Periplasmic binding proteins and sugar binding domain of LacI family
JHODCLMD_01212 2.2e-113
JHODCLMD_01213 5e-116 dck 2.7.1.74 F deoxynucleoside kinase
JHODCLMD_01214 3.2e-176 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
JHODCLMD_01215 7.3e-86 uspA T Belongs to the universal stress protein A family
JHODCLMD_01216 8.1e-276 pepV 3.5.1.18 E dipeptidase PepV
JHODCLMD_01217 5.4e-153 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
JHODCLMD_01218 1.1e-300 ytgP S Polysaccharide biosynthesis protein
JHODCLMD_01219 7.6e-42
JHODCLMD_01220 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
JHODCLMD_01221 1.9e-217 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
JHODCLMD_01222 3e-93 tag 3.2.2.20 L glycosylase
JHODCLMD_01223 1.3e-26 L Transposase
JHODCLMD_01224 1.3e-257 EGP Major facilitator Superfamily
JHODCLMD_01225 2.3e-84 perR P Belongs to the Fur family
JHODCLMD_01226 7.7e-231 cycA E Amino acid permease
JHODCLMD_01227 3.1e-101 V VanZ like family
JHODCLMD_01228 1e-23
JHODCLMD_01229 2.2e-85 S Short repeat of unknown function (DUF308)
JHODCLMD_01230 7.7e-79 S Psort location Cytoplasmic, score
JHODCLMD_01231 6e-285 dinB 2.7.7.7 L impB/mucB/samB family C-terminal domain
JHODCLMD_01232 2e-76 hsp O Belongs to the small heat shock protein (HSP20) family
JHODCLMD_01233 5.3e-153 yeaE S Aldo keto
JHODCLMD_01234 5.3e-237 preA 1.3.1.1 C 4Fe-4S dicluster domain
JHODCLMD_01235 1.8e-234 preT 1.3.1.1 E Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
JHODCLMD_01236 3.9e-147 xth 3.1.11.2 L exodeoxyribonuclease III
JHODCLMD_01237 7.3e-84 lytE M LysM domain protein
JHODCLMD_01238 0.0 oppD EP Psort location Cytoplasmic, score
JHODCLMD_01239 1.7e-42 lytE M LysM domain protein
JHODCLMD_01240 1.2e-158 sufD O Uncharacterized protein family (UPF0051)
JHODCLMD_01241 7.6e-111 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JHODCLMD_01242 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
JHODCLMD_01243 4.2e-63 lmrB EGP Major facilitator Superfamily
JHODCLMD_01244 4.8e-158 lmrB EGP Major facilitator Superfamily
JHODCLMD_01245 3.6e-94 2.3.1.128 K Acetyltransferase (GNAT) domain
JHODCLMD_01255 6.1e-57
JHODCLMD_01257 4.3e-44
JHODCLMD_01258 4.4e-18
JHODCLMD_01259 1.7e-29
JHODCLMD_01260 3.3e-39 ykuJ S Protein of unknown function (DUF1797)
JHODCLMD_01261 3e-179 mprF I Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JHODCLMD_01262 2.2e-198 cpoA GT4 M Glycosyltransferase, group 1 family protein
JHODCLMD_01263 2.5e-228 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
JHODCLMD_01264 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
JHODCLMD_01265 2.7e-39 ptsH G phosphocarrier protein HPR
JHODCLMD_01266 6.4e-27
JHODCLMD_01267 0.0 clpE O Belongs to the ClpA ClpB family
JHODCLMD_01268 1.7e-100 S Pfam:DUF3816
JHODCLMD_01269 3.4e-140 manA 1.14.13.81, 5.3.1.8, 5.4.2.8 G MucBP domain
JHODCLMD_01270 7.1e-116
JHODCLMD_01271 2e-155 V ABC transporter, ATP-binding protein
JHODCLMD_01272 1.3e-63 gntR1 K Transcriptional regulator, GntR family
JHODCLMD_01273 2.8e-221 ltrA_1 2.7.7.49 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
JHODCLMD_01274 7.2e-13 L PFAM transposase IS200-family protein
JHODCLMD_01275 2.2e-34 L PFAM transposase IS200-family protein
JHODCLMD_01276 9.6e-310 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
JHODCLMD_01277 3.8e-25 S dextransucrase activity
JHODCLMD_01278 6.8e-57 S Uncharacterised protein family (UPF0236)
JHODCLMD_01279 2e-16 L PFAM Integrase catalytic region
JHODCLMD_01280 3.7e-49 L Helix-turn-helix domain
JHODCLMD_01281 1.2e-33 L Helix-turn-helix domain
JHODCLMD_01282 3.6e-136 L hmm pf00665
JHODCLMD_01283 7.6e-132 O Bacterial dnaA protein
JHODCLMD_01284 1.6e-238 L Integrase core domain
JHODCLMD_01285 8e-68 M repeat protein
JHODCLMD_01286 8.5e-34 L PFAM transposase IS200-family protein
JHODCLMD_01287 1.9e-33 L PFAM transposase IS200-family protein
JHODCLMD_01288 7.6e-71 glf 5.4.99.9 M UDP-galactopyranose mutase
JHODCLMD_01289 1.1e-118 rfbP 2.7.8.6 M Bacterial sugar transferase
JHODCLMD_01290 5.6e-172 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
JHODCLMD_01291 3.7e-145 cps1D M Domain of unknown function (DUF4422)
JHODCLMD_01292 3.4e-138 recX 2.4.1.337 GT4 S Regulatory protein RecX
JHODCLMD_01293 4.9e-31
JHODCLMD_01294 5e-34 S Protein of unknown function (DUF2922)
JHODCLMD_01295 1.5e-142 yihY S Belongs to the UPF0761 family
JHODCLMD_01296 1.4e-254 E Arginine ornithine antiporter
JHODCLMD_01297 2.7e-221 arcT 2.6.1.1 E Aminotransferase
JHODCLMD_01298 1.3e-167 map 3.4.11.18 E Methionine Aminopeptidase
JHODCLMD_01299 6.1e-79 fld C Flavodoxin
JHODCLMD_01300 1.3e-67 gtcA S Teichoic acid glycosylation protein
JHODCLMD_01301 5.8e-16
JHODCLMD_01302 3.6e-31
JHODCLMD_01303 9e-209 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
JHODCLMD_01305 1.9e-231 yfmL L DEAD DEAH box helicase
JHODCLMD_01306 1.7e-190 mocA S Oxidoreductase
JHODCLMD_01307 9.1e-62 S Domain of unknown function (DUF4828)
JHODCLMD_01308 1.2e-105 yvdD 3.2.2.10 S Belongs to the LOG family
JHODCLMD_01309 2.9e-165 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
JHODCLMD_01310 1.8e-297 gshF 6.3.2.2 H Belongs to the glutamate--cysteine ligase type 1 family
JHODCLMD_01311 6.2e-196 S Protein of unknown function (DUF3114)
JHODCLMD_01312 4.2e-80 yjcF 3.5.4.33, 4.4.1.8 K protein acetylation
JHODCLMD_01313 3.4e-94 K Acetyltransferase (GNAT) family
JHODCLMD_01314 2e-76 K LytTr DNA-binding domain
JHODCLMD_01315 1.5e-66 S Protein of unknown function (DUF3021)
JHODCLMD_01316 1.6e-155 3.2.1.96, 3.5.1.28 GH73 M N-acetylmuramoyl-L-alanine amidase
JHODCLMD_01317 8.2e-76 ogt 2.1.1.63 L Methyltransferase
JHODCLMD_01318 6e-108 pnb C nitroreductase
JHODCLMD_01319 3.3e-92
JHODCLMD_01320 8.6e-84 yvbK 3.1.3.25 K GNAT family
JHODCLMD_01321 4.4e-247 gor 1.8.1.7 C pyridine nucleotide-disulfide oxidoreductase
JHODCLMD_01322 3.1e-204 amtB P ammonium transporter
JHODCLMD_01323 8.8e-38 3.6.4.12 S PD-(D/E)XK nuclease family transposase
JHODCLMD_01324 1.7e-148 S PFAM Archaeal ATPase
JHODCLMD_01325 0.0 XK27_08510 L Type III restriction protein res subunit
JHODCLMD_01326 2.5e-42
JHODCLMD_01327 2.5e-155 cylA V ABC transporter
JHODCLMD_01328 1.2e-141 cylB V ABC-2 type transporter
JHODCLMD_01329 3.2e-72 K LytTr DNA-binding domain
JHODCLMD_01330 6.3e-61 S Protein of unknown function (DUF3021)
JHODCLMD_01332 4.3e-127 L Plasmid pRiA4b ORF-3-like protein
JHODCLMD_01333 4.9e-111 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
JHODCLMD_01334 1.4e-98 dps P Belongs to the Dps family
JHODCLMD_01335 2.5e-36 copZ P PFAM Heavy metal transport detoxification protein
JHODCLMD_01336 8.5e-297 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
JHODCLMD_01337 5.1e-39 3.6.1.13, 3.6.1.55 F NUDIX domain
JHODCLMD_01338 1.3e-257 ltrA_1 L PFAM RNA-directed DNA polymerase (Reverse transcriptase)
JHODCLMD_01339 1.3e-185 yegS 2.7.1.107 G Lipid kinase
JHODCLMD_01340 1.8e-275 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JHODCLMD_01341 7.7e-277 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
JHODCLMD_01342 2.4e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JHODCLMD_01343 3.3e-203 camS S sex pheromone
JHODCLMD_01344 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JHODCLMD_01345 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
JHODCLMD_01346 1.1e-209 purK2 6.3.4.18 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
JHODCLMD_01347 6.6e-99 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
JHODCLMD_01348 3e-113 acmC 3.2.1.96 NU mannosyl-glycoprotein
JHODCLMD_01349 8e-140 IQ reductase
JHODCLMD_01350 5.6e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
JHODCLMD_01351 4.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
JHODCLMD_01352 5.5e-141 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
JHODCLMD_01353 9.8e-141 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JHODCLMD_01354 1.6e-149 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JHODCLMD_01355 4.2e-139 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JHODCLMD_01356 1.1e-62 rplQ J Ribosomal protein L17
JHODCLMD_01357 2.8e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JHODCLMD_01358 2.3e-63 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JHODCLMD_01359 6.2e-58 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
JHODCLMD_01360 1.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
JHODCLMD_01361 1.2e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
JHODCLMD_01362 4.4e-123 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
JHODCLMD_01363 2.6e-239 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
JHODCLMD_01364 5.8e-63 rplO J Binds to the 23S rRNA
JHODCLMD_01365 2.9e-24 rpmD J Ribosomal protein L30
JHODCLMD_01366 2.2e-85 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
JHODCLMD_01367 6.6e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
JHODCLMD_01368 4.6e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
JHODCLMD_01369 1.3e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JHODCLMD_01370 4e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
JHODCLMD_01371 1.4e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
JHODCLMD_01372 2.6e-49 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
JHODCLMD_01373 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
JHODCLMD_01374 5e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JHODCLMD_01375 8.4e-28 rpmC J Belongs to the universal ribosomal protein uL29 family
JHODCLMD_01376 3.5e-76 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JHODCLMD_01377 6.1e-112 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
JHODCLMD_01378 2.8e-52 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
JHODCLMD_01379 1.4e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
JHODCLMD_01380 4.2e-150 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JHODCLMD_01381 4.9e-45 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
JHODCLMD_01382 5.5e-107 rplD J Forms part of the polypeptide exit tunnel
JHODCLMD_01383 1.5e-118 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JHODCLMD_01384 3.2e-47 rpsJ J Involved in the binding of tRNA to the ribosomes
JHODCLMD_01385 1.2e-246 L Transposase
JHODCLMD_01386 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JHODCLMD_01387 2.4e-83 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
JHODCLMD_01388 3.9e-72 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
JHODCLMD_01389 2e-107 pilD 3.4.23.43 NOU Type II secretory pathway prepilin signal peptidase PulO and related peptidases
JHODCLMD_01390 8.8e-199 ykiI
JHODCLMD_01391 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JHODCLMD_01392 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JHODCLMD_01394 1e-110 K Bacterial regulatory proteins, tetR family
JHODCLMD_01395 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
JHODCLMD_01396 4.4e-77 ctsR K Belongs to the CtsR family
JHODCLMD_01397 2.1e-196 adhP 1.1.1.1 C alcohol dehydrogenase
JHODCLMD_01398 2.1e-140 S Hydrolases of the alpha beta superfamily
JHODCLMD_01404 9e-113 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
JHODCLMD_01405 3.6e-12 L PFAM transposase IS200-family protein
JHODCLMD_01406 2.5e-33 L PFAM transposase IS200-family protein
JHODCLMD_01407 1.5e-275 lysP E amino acid
JHODCLMD_01408 4.7e-08 2.3.1.128 J Acetyltransferase (GNAT) domain
JHODCLMD_01409 9.8e-118 lssY 3.6.1.27 I phosphatase
JHODCLMD_01410 1e-81 S Threonine/Serine exporter, ThrE
JHODCLMD_01411 2.6e-127 thrE S Putative threonine/serine exporter
JHODCLMD_01412 1e-30 cspC K Cold shock protein
JHODCLMD_01413 1.6e-123 sirR K iron dependent repressor
JHODCLMD_01414 5.5e-164 czcD P cation diffusion facilitator family transporter
JHODCLMD_01415 9.4e-116 S membrane
JHODCLMD_01416 7.7e-107 S VIT family
JHODCLMD_01417 5.5e-83 usp1 T Belongs to the universal stress protein A family
JHODCLMD_01418 3.4e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
JHODCLMD_01419 7.5e-152 glnH ET ABC transporter
JHODCLMD_01420 2.4e-110 gluC P ABC transporter permease
JHODCLMD_01421 6.1e-109 glnP P ABC transporter permease
JHODCLMD_01422 8.3e-221 S CAAX protease self-immunity
JHODCLMD_01423 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JHODCLMD_01424 2.9e-57
JHODCLMD_01425 3.1e-72 merR K MerR HTH family regulatory protein
JHODCLMD_01426 2.1e-269 lmrB EGP Major facilitator Superfamily
JHODCLMD_01427 1.9e-122 S Domain of unknown function (DUF4811)
JHODCLMD_01428 4e-164 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
JHODCLMD_01430 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JHODCLMD_01431 9.8e-103 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
JHODCLMD_01432 9.4e-186 I Alpha beta
JHODCLMD_01433 7.2e-270 emrY EGP Major facilitator Superfamily
JHODCLMD_01434 2.1e-117 ung2 3.2.2.27 L Uracil-DNA glycosylase
JHODCLMD_01435 2.7e-252 yjjP S Putative threonine/serine exporter
JHODCLMD_01436 3.3e-158 mleR K LysR family
JHODCLMD_01437 3.1e-267 frdC 1.3.5.4 C FAD binding domain
JHODCLMD_01438 4e-259 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
JHODCLMD_01439 1e-301 sfcA 1.1.1.38, 4.1.1.101 C Malic enzyme
JHODCLMD_01440 4.3e-158 mleR K LysR family
JHODCLMD_01441 6.6e-110 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JHODCLMD_01442 1.9e-205 adhA 1.1.1.1 C Zinc-binding alcohol dehydrogenase family protein
JHODCLMD_01443 6.6e-295 L PFAM plasmid pRiA4b ORF-3 family protein
JHODCLMD_01444 1e-63 S Uncharacterized protein conserved in bacteria (DUF2252)
JHODCLMD_01445 2.8e-188 S Uncharacterized protein conserved in bacteria (DUF2252)
JHODCLMD_01446 6.4e-21
JHODCLMD_01447 1e-198 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
JHODCLMD_01448 3e-75
JHODCLMD_01449 1.6e-230 dacA 3.4.16.4 M Belongs to the peptidase S11 family
JHODCLMD_01450 1.8e-131 ponA V Beta-lactamase enzyme family
JHODCLMD_01451 1.7e-284 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
JHODCLMD_01452 4.8e-216 uhpT EGP Major facilitator Superfamily
JHODCLMD_01453 6.6e-259 ytjP 3.5.1.18 E Dipeptidase
JHODCLMD_01454 7.5e-275 arcD S C4-dicarboxylate anaerobic carrier
JHODCLMD_01455 1.5e-180 yfeX P Peroxidase
JHODCLMD_01456 4.8e-170 lsa S ABC transporter
JHODCLMD_01457 5.1e-133 I alpha/beta hydrolase fold
JHODCLMD_01458 1.8e-179 MA20_14895 S Conserved hypothetical protein 698
JHODCLMD_01459 4.6e-94 S NADPH-dependent FMN reductase
JHODCLMD_01461 1e-170 mccA 2.5.1.134, 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
JHODCLMD_01462 1.4e-178 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
JHODCLMD_01463 2.8e-230 mntH P H( )-stimulated, divalent metal cation uptake system
JHODCLMD_01464 1.2e-115 ktrA P domain protein
JHODCLMD_01465 1.1e-237 ktrB P Potassium uptake protein
JHODCLMD_01466 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
JHODCLMD_01467 4.3e-83 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
JHODCLMD_01468 1.2e-154 G Glycosyl hydrolases family 8
JHODCLMD_01469 4e-26 G Glycosyl hydrolases family 8
JHODCLMD_01470 1.7e-243 ydaM M Glycosyl transferase
JHODCLMD_01472 1.4e-140
JHODCLMD_01473 6.6e-125 phoU P Plays a role in the regulation of phosphate uptake
JHODCLMD_01474 3.1e-136 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
JHODCLMD_01475 5.9e-155 pstA P Phosphate transport system permease protein PstA
JHODCLMD_01476 1.9e-153 pstC P probably responsible for the translocation of the substrate across the membrane
JHODCLMD_01477 4.6e-160 pstS P Phosphate
JHODCLMD_01478 6e-134 K Transcriptional regulatory protein, C-terminal domain protein
JHODCLMD_01479 4e-42 L Transposase
JHODCLMD_01481 3.1e-184
JHODCLMD_01482 1.2e-97 2.3.1.128 K acetyltransferase
JHODCLMD_01483 4e-83 manA 5.3.1.8 G mannose-6-phosphate isomerase
JHODCLMD_01484 3.7e-70 1.1.1.90 C Zn-dependent alcohol dehydrogenases, class III
JHODCLMD_01485 4.7e-63 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JHODCLMD_01486 3.9e-182
JHODCLMD_01487 6.4e-99 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JHODCLMD_01488 6.4e-183 S Phosphotransferase system, EIIC
JHODCLMD_01489 4e-141 L PFAM Integrase catalytic region
JHODCLMD_01491 1.1e-145 metQ_4 P Belongs to the nlpA lipoprotein family
JHODCLMD_01492 7.4e-88 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
JHODCLMD_01493 4.3e-121 O Zinc-dependent metalloprotease
JHODCLMD_01494 4.1e-28 L PFAM Integrase catalytic region
JHODCLMD_01495 6e-18 L PFAM Integrase catalytic region
JHODCLMD_01496 1.7e-19 L PFAM Integrase catalytic region
JHODCLMD_01497 1.4e-74 L Transposase
JHODCLMD_01498 9.5e-39 S Cytochrome B5
JHODCLMD_01499 6.7e-16 L Transposase
JHODCLMD_01500 4.3e-13
JHODCLMD_01501 5.4e-20 cytX U Belongs to the purine-cytosine permease (2.A.39) family
JHODCLMD_01502 1.5e-42 wecD3 K PFAM GCN5-related N-acetyltransferase
JHODCLMD_01503 4.1e-84 ywlG S Belongs to the UPF0340 family
JHODCLMD_01504 2.3e-159 spoU 2.1.1.185 J Methyltransferase
JHODCLMD_01505 3.7e-224 oxlT P Major Facilitator Superfamily
JHODCLMD_01506 1.6e-82 L Transposase and inactivated derivatives, IS30 family DNA replication, recombination, and repair
JHODCLMD_01507 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
JHODCLMD_01508 1.9e-222 G Major Facilitator Superfamily
JHODCLMD_01509 1.9e-12 G Major Facilitator Superfamily
JHODCLMD_01510 3.6e-301 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
JHODCLMD_01512 2.5e-217 S cog cog1373
JHODCLMD_01513 1.7e-176 coaA 2.7.1.33 F Pantothenic acid kinase
JHODCLMD_01514 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
JHODCLMD_01515 7.3e-158 EG EamA-like transporter family
JHODCLMD_01516 1.1e-36 Q pyridine nucleotide-disulphide oxidoreductase
JHODCLMD_01517 6.3e-229 L transposase, IS605 OrfB family
JHODCLMD_01518 4.8e-67 L PFAM transposase IS200-family protein
JHODCLMD_01519 0.0 helD 3.6.4.12 L DNA helicase
JHODCLMD_01520 8.8e-116 dedA S SNARE associated Golgi protein
JHODCLMD_01521 5e-127 3.1.3.73 G phosphoglycerate mutase
JHODCLMD_01522 6.6e-232 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JHODCLMD_01523 2.1e-33 S Transglycosylase associated protein
JHODCLMD_01525 2.1e-180 1.1.1.28 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JHODCLMD_01526 4.5e-220 V domain protein
JHODCLMD_01527 1.6e-94 K Transcriptional regulator (TetR family)
JHODCLMD_01528 1.7e-38 pspC KT positive regulation of macromolecule biosynthetic process
JHODCLMD_01529 7.1e-150
JHODCLMD_01530 3.1e-17 3.2.1.14 GH18
JHODCLMD_01531 2.1e-81 zur P Belongs to the Fur family
JHODCLMD_01532 1.5e-98 gmk2 2.7.4.8 F Guanylate kinase
JHODCLMD_01533 6.9e-74 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
JHODCLMD_01534 1.8e-254 yfnA E Amino Acid
JHODCLMD_01535 5.7e-231 EGP Sugar (and other) transporter
JHODCLMD_01536 2.3e-31
JHODCLMD_01537 9.5e-18
JHODCLMD_01538 3.6e-65
JHODCLMD_01539 7.9e-34
JHODCLMD_01540 1.8e-206 potD P ABC transporter
JHODCLMD_01541 6.5e-140 potC P ABC transporter permease
JHODCLMD_01542 3.9e-145 potB P ABC transporter permease
JHODCLMD_01543 1.7e-204 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
JHODCLMD_01544 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
JHODCLMD_01545 2.3e-178 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
JHODCLMD_01546 0.0 pacL 3.6.3.8 P P-type ATPase
JHODCLMD_01547 7.6e-85 dps P Belongs to the Dps family
JHODCLMD_01548 1.5e-256 yagE E amino acid
JHODCLMD_01549 7.2e-118 gph 3.1.3.18 S HAD hydrolase, family IA, variant
JHODCLMD_01550 1.8e-61 3.6.4.12 S PD-(D/E)XK nuclease family transposase
JHODCLMD_01551 4.1e-181 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
JHODCLMD_01552 9.5e-183 iunH2 3.2.2.1 F nucleoside hydrolase
JHODCLMD_01553 2e-09 IQ KR domain
JHODCLMD_01554 1.2e-112 IQ KR domain
JHODCLMD_01555 3.3e-133 S membrane transporter protein
JHODCLMD_01556 1.3e-96 S ABC-type cobalt transport system, permease component
JHODCLMD_01557 1.1e-248 cbiO1 S ABC transporter, ATP-binding protein
JHODCLMD_01558 1.1e-110 P Cobalt transport protein
JHODCLMD_01559 1.6e-52 yvlA
JHODCLMD_01560 0.0 yjcE P Sodium proton antiporter
JHODCLMD_01561 2.2e-52 ypaA S Protein of unknown function (DUF1304)
JHODCLMD_01562 2e-172 D Alpha beta
JHODCLMD_01563 6.5e-72 K Transcriptional regulator
JHODCLMD_01564 5.5e-158
JHODCLMD_01565 4.8e-174 1.6.5.5 C Zinc-binding dehydrogenase
JHODCLMD_01566 4.2e-256 G PTS system Galactitol-specific IIC component
JHODCLMD_01567 1.7e-210 EGP Major facilitator Superfamily
JHODCLMD_01568 3.9e-135 V ABC transporter
JHODCLMD_01569 2e-105
JHODCLMD_01570 4e-14
JHODCLMD_01571 6e-62
JHODCLMD_01572 1.5e-194 lplA 6.3.1.20 H Lipoate-protein ligase
JHODCLMD_01573 5.1e-81 uspA T universal stress protein
JHODCLMD_01574 0.0 tetP J elongation factor G
JHODCLMD_01575 2.9e-165 GK ROK family
JHODCLMD_01576 7.7e-239 brnQ U Component of the transport system for branched-chain amino acids
JHODCLMD_01577 6.7e-136 aroD S Serine hydrolase (FSH1)
JHODCLMD_01578 1.2e-236 yagE E amino acid
JHODCLMD_01579 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
JHODCLMD_01580 1.6e-85 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JHODCLMD_01581 1.8e-10 pipD E Dipeptidase
JHODCLMD_01582 1.4e-110 L PFAM Integrase catalytic region
JHODCLMD_01583 7.3e-132 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
JHODCLMD_01584 1.3e-156 3.2.1.52 GH20 G Xylose isomerase domain protein TIM barrel
JHODCLMD_01585 1.4e-17 S AI-2E family transporter
JHODCLMD_01586 5.7e-132 XK27_07210 6.1.1.6 S B3 4 domain
JHODCLMD_01587 1.1e-77 yybA 2.3.1.57 K Transcriptional regulator
JHODCLMD_01588 1.3e-89 M1-874 K Domain of unknown function (DUF1836)
JHODCLMD_01589 2.5e-89 1.14.14.47, 1.6.5.3, 1.6.99.3 GM epimerase
JHODCLMD_01590 1.7e-154 ypdB V (ABC) transporter
JHODCLMD_01591 1.9e-237 yhdP S Transporter associated domain
JHODCLMD_01592 2.7e-82 nrdI F Belongs to the NrdI family
JHODCLMD_01593 2.7e-73 S 3-demethylubiquinone-9 3-methyltransferase
JHODCLMD_01594 4.4e-190 yeaN P Transporter, major facilitator family protein
JHODCLMD_01595 7.5e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
JHODCLMD_01596 1.4e-275 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
JHODCLMD_01597 5.5e-40
JHODCLMD_01598 1.2e-64 lacS G Transporter
JHODCLMD_01599 3.3e-80 uspA T universal stress protein
JHODCLMD_01600 1.5e-80 K AsnC family
JHODCLMD_01601 6.8e-232 gltP U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
JHODCLMD_01602 3.1e-102 dedA 3.1.3.1 S SNARE associated Golgi protein
JHODCLMD_01603 3.8e-106 tra L Transposase and inactivated derivatives, IS30 family
JHODCLMD_01604 2.5e-178 galR K Transcriptional regulator
JHODCLMD_01605 3.7e-279 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
JHODCLMD_01606 5.5e-225 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JHODCLMD_01607 2.1e-177 celE 3.2.1.4 GH5,GH9 E GDSL-like Lipase/Acylhydrolase family
JHODCLMD_01608 1.9e-144 ptp3 3.1.3.48 T Tyrosine phosphatase family
JHODCLMD_01609 1.5e-91 yxkA S Phosphatidylethanolamine-binding protein
JHODCLMD_01610 9.1e-36
JHODCLMD_01611 2e-52
JHODCLMD_01612 1.1e-201
JHODCLMD_01613 1.1e-81 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
JHODCLMD_01614 1.8e-133 pnuC H nicotinamide mononucleotide transporter
JHODCLMD_01615 9.5e-155 ytbE 1.1.1.346 S Aldo keto reductase
JHODCLMD_01616 1.5e-132 K response regulator
JHODCLMD_01617 3.4e-180 T PhoQ Sensor
JHODCLMD_01618 1.9e-133 macB2 V ABC transporter, ATP-binding protein
JHODCLMD_01619 0.0 ysaB V FtsX-like permease family
JHODCLMD_01620 4.5e-157 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to
JHODCLMD_01621 4.8e-168 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
JHODCLMD_01622 8.4e-287 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JHODCLMD_01623 2e-195 EGP Major facilitator Superfamily
JHODCLMD_01624 6e-88 ymdB S Macro domain protein
JHODCLMD_01625 1.4e-105 K Helix-turn-helix XRE-family like proteins
JHODCLMD_01626 0.0 pepO 3.4.24.71 O Peptidase family M13
JHODCLMD_01627 1.4e-47
JHODCLMD_01628 3e-232 S Putative metallopeptidase domain
JHODCLMD_01629 4.4e-203 3.1.3.1 S associated with various cellular activities
JHODCLMD_01630 5.2e-121 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
JHODCLMD_01631 5.9e-64 yeaO S Protein of unknown function, DUF488
JHODCLMD_01633 1.7e-117 yrkL S Flavodoxin-like fold
JHODCLMD_01634 1.5e-52
JHODCLMD_01635 1.8e-16 S Domain of unknown function (DUF4767)
JHODCLMD_01636 8e-10 3.6.4.12 S PD-(D/E)XK nuclease family transposase
JHODCLMD_01637 1.7e-47
JHODCLMD_01638 3.4e-08 nrnB S DHHA1 domain
JHODCLMD_01639 2.6e-205 nrnB S DHHA1 domain
JHODCLMD_01640 6.2e-227 S Uncharacterized protein conserved in bacteria (DUF2325)
JHODCLMD_01641 1.2e-247 brnQ U Component of the transport system for branched-chain amino acids
JHODCLMD_01642 5.4e-104 NU mannosyl-glycoprotein
JHODCLMD_01643 1.6e-140 S Putative ABC-transporter type IV
JHODCLMD_01644 7.1e-273 S ABC transporter, ATP-binding protein
JHODCLMD_01645 7.2e-15 S Protein of unknown function (DUF3278)
JHODCLMD_01646 1.6e-39 S Protein of unknown function (DUF3278)
JHODCLMD_01648 2.2e-73 M PFAM NLP P60 protein
JHODCLMD_01649 2.2e-182 ABC-SBP S ABC transporter
JHODCLMD_01650 1.1e-153 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
JHODCLMD_01651 1.8e-136 XK27_08845 S ABC transporter, ATP-binding protein
JHODCLMD_01652 5.1e-96 P Cadmium resistance transporter
JHODCLMD_01653 4.9e-54 K Transcriptional regulator, ArsR family
JHODCLMD_01654 2.7e-236 mepA V MATE efflux family protein
JHODCLMD_01655 1.9e-55 trxA O Belongs to the thioredoxin family
JHODCLMD_01656 6.6e-131 terC P membrane
JHODCLMD_01657 3.1e-167 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
JHODCLMD_01658 2.8e-168 corA P CorA-like Mg2+ transporter protein
JHODCLMD_01659 2.3e-278 pipD E Dipeptidase
JHODCLMD_01660 1.6e-241 pbuX F xanthine permease
JHODCLMD_01661 4.2e-71 S Uncharacterised protein family (UPF0236)
JHODCLMD_01662 5.3e-273 S C4-dicarboxylate anaerobic carrier
JHODCLMD_01663 1.2e-39
JHODCLMD_01664 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
JHODCLMD_01665 8.4e-207 gldA 1.1.1.6 C dehydrogenase
JHODCLMD_01666 6e-64 S Alpha beta hydrolase
JHODCLMD_01667 8.2e-44 S Alpha beta hydrolase
JHODCLMD_01668 2.8e-216 dacA 3.4.16.4 M Belongs to the peptidase S11 family
JHODCLMD_01669 1.3e-97
JHODCLMD_01671 1.7e-122 yciB M ErfK YbiS YcfS YnhG
JHODCLMD_01672 5.6e-15
JHODCLMD_01673 2.8e-260 S Putative peptidoglycan binding domain
JHODCLMD_01674 3e-108 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S- specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX
JHODCLMD_01675 1e-87
JHODCLMD_01676 5.2e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
JHODCLMD_01677 5.4e-212 yttB EGP Major facilitator Superfamily
JHODCLMD_01678 8.2e-103
JHODCLMD_01679 1e-24
JHODCLMD_01680 5.1e-173 scrR K Transcriptional regulator, LacI family
JHODCLMD_01681 6.9e-237 acm2 3.2.1.17 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
JHODCLMD_01682 9.2e-50 czrA K Transcriptional regulator, ArsR family
JHODCLMD_01683 2.5e-36
JHODCLMD_01684 0.0 yhcA V ABC transporter, ATP-binding protein
JHODCLMD_01685 1.3e-117 devA 3.6.3.25 V ABC transporter, ATP-binding protein
JHODCLMD_01686 1.2e-167 hrtB V ABC transporter permease
JHODCLMD_01687 1.8e-84 ygfC K transcriptional regulator (TetR family)
JHODCLMD_01688 4.9e-190 tdh 1.1.1.14 E Alcohol dehydrogenase GroES-like domain
JHODCLMD_01689 8.9e-287 mntH P H( )-stimulated, divalent metal cation uptake system
JHODCLMD_01690 6.4e-32
JHODCLMD_01691 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JHODCLMD_01693 6e-214 yxiO S Vacuole effluxer Atg22 like
JHODCLMD_01694 6.3e-52 npp S type I phosphodiesterase nucleotide pyrophosphatase
JHODCLMD_01695 1.1e-130 npp S type I phosphodiesterase nucleotide pyrophosphatase
JHODCLMD_01696 5.1e-238 E amino acid
JHODCLMD_01697 3e-181 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JHODCLMD_01698 3.1e-217 yxjG_1 E methionine synthase, vitamin-B12 independent
JHODCLMD_01699 1.5e-74 elaA S Gnat family
JHODCLMD_01700 1.2e-120 GM NmrA-like family
JHODCLMD_01701 1.8e-50 hxlR K Transcriptional regulator, HxlR family
JHODCLMD_01702 4.1e-107 XK27_02070 S Nitroreductase family
JHODCLMD_01703 1.5e-82 K Transcriptional regulator, HxlR family
JHODCLMD_01704 9.8e-231
JHODCLMD_01705 6.5e-210 EGP Major facilitator Superfamily
JHODCLMD_01706 2e-255 pepC 3.4.22.40 E aminopeptidase
JHODCLMD_01707 8.4e-111 ylbE GM NAD dependent epimerase dehydratase family protein
JHODCLMD_01708 0.0 pepN 3.4.11.2 E aminopeptidase
JHODCLMD_01709 5.4e-197 asnA 6.3.1.1 F aspartate--ammonia ligase
JHODCLMD_01710 3e-256 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
JHODCLMD_01711 2.7e-32 L PFAM transposase IS200-family protein
JHODCLMD_01712 7.2e-13 L PFAM transposase IS200-family protein
JHODCLMD_01713 6.1e-128 yfeJ 6.3.5.2 F glutamine amidotransferase
JHODCLMD_01714 1.5e-59 yneR
JHODCLMD_01715 5.1e-159 akr5f 1.1.1.346 S reductase
JHODCLMD_01716 9.5e-40 K Transcriptional regulator
JHODCLMD_01717 1.8e-57 K Transcriptional regulator
JHODCLMD_01718 3.1e-184 ansA 3.5.1.1 EJ L-asparaginase, type I
JHODCLMD_01719 1.8e-160 ypuA S Protein of unknown function (DUF1002)
JHODCLMD_01720 2.3e-226 aadAT EK Aminotransferase, class I
JHODCLMD_01721 6.5e-176 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
JHODCLMD_01722 1.5e-152 tesE Q hydratase
JHODCLMD_01723 7.3e-101 S Alpha beta hydrolase
JHODCLMD_01724 4.6e-70 lacA S transferase hexapeptide repeat
JHODCLMD_01725 5.8e-147 K Transcriptional regulator
JHODCLMD_01726 8.1e-64 C Flavodoxin
JHODCLMD_01727 1.4e-10 S Oxidoreductase, aldo keto reductase family protein
JHODCLMD_01728 2.1e-49 yphJ 4.1.1.44 S decarboxylase
JHODCLMD_01729 1.1e-110 1.1.1.193, 3.5.4.26 H RibD C-terminal domain
JHODCLMD_01730 1.1e-118 L PFAM Integrase catalytic region
JHODCLMD_01731 4.5e-33 1.1.1.193, 3.5.4.26 H RibD C-terminal domain
JHODCLMD_01732 1.5e-33 XK27_08850 J Aminoacyl-tRNA editing domain
JHODCLMD_01733 1.8e-192 V Beta-lactamase
JHODCLMD_01734 6e-94 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
JHODCLMD_01735 7e-98 yhiD S MgtC family
JHODCLMD_01736 2.3e-110 S GyrI-like small molecule binding domain
JHODCLMD_01737 7.3e-110 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
JHODCLMD_01738 3.2e-50 azlD E Branched-chain amino acid transport
JHODCLMD_01739 4.1e-119 azlC E azaleucine resistance protein AzlC
JHODCLMD_01740 6.3e-260 K Aminotransferase class I and II
JHODCLMD_01741 2.9e-99 S amidohydrolase
JHODCLMD_01742 3.1e-78 S amidohydrolase
JHODCLMD_01743 9.2e-49 2.3.1.183 M Acetyltransferase GNAT family
JHODCLMD_01744 2.5e-14 2.3.1.183 M Acetyltransferase GNAT family
JHODCLMD_01745 1.7e-113 lepB 3.4.21.89 U Belongs to the peptidase S26 family
JHODCLMD_01746 1.4e-247 yxbA 6.3.1.12 S ATP-grasp enzyme
JHODCLMD_01747 1.7e-290 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JHODCLMD_01748 0.0 asnB 6.3.5.4 E Asparagine synthase
JHODCLMD_01749 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
JHODCLMD_01750 2.8e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
JHODCLMD_01751 3e-131 jag S R3H domain protein
JHODCLMD_01752 4.5e-130 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
JHODCLMD_01753 2e-58 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
JHODCLMD_01754 3.4e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)