ORF_ID e_value Gene_name EC_number CAZy COGs Description
PJOPAKIP_00001 1.6e-145 cobB2 K Sir2 family
PJOPAKIP_00002 4.5e-233 tdcB 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
PJOPAKIP_00003 0.0 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
PJOPAKIP_00004 3.1e-09 L Transposase
PJOPAKIP_00005 2e-155 G Binding-protein-dependent transport system inner membrane component
PJOPAKIP_00006 1.7e-141 G Binding-protein-dependent transport system inner membrane component
PJOPAKIP_00007 8.4e-243 msmE7 G Bacterial extracellular solute-binding protein
PJOPAKIP_00008 5.1e-226 nagC GK ROK family
PJOPAKIP_00009 0.0 3.2.1.22 G Glycosyl hydrolase family 36 N-terminal domain
PJOPAKIP_00010 2.3e-81 tadA 3.5.4.1, 3.5.4.33, 3.8.1.5, 6.3.4.19 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PJOPAKIP_00011 0.0 yjcE P Sodium/hydrogen exchanger family
PJOPAKIP_00012 7.8e-148 ypfH S Phospholipase/Carboxylesterase
PJOPAKIP_00013 4.2e-129
PJOPAKIP_00014 1.5e-111 dcd 3.5.4.13 F Belongs to the dCTP deaminase family
PJOPAKIP_00015 2.1e-89
PJOPAKIP_00016 0.0 pacL2 3.6.3.8 P Cation transporter/ATPase, N-terminus
PJOPAKIP_00017 6.6e-25 I alpha/beta hydrolase fold
PJOPAKIP_00018 1.8e-259 S Domain of unknown function (DUF4143)
PJOPAKIP_00019 4.3e-231 EGP Major facilitator Superfamily
PJOPAKIP_00020 7.5e-175 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PJOPAKIP_00021 2e-269 KLT Domain of unknown function (DUF4032)
PJOPAKIP_00022 7.4e-211 ugpC E Belongs to the ABC transporter superfamily
PJOPAKIP_00023 4.8e-221 2.4.1.166 GT2 M Glycosyltransferase like family 2
PJOPAKIP_00024 8.2e-190 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PJOPAKIP_00026 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PJOPAKIP_00027 3.4e-82 nrdI F Probably involved in ribonucleotide reductase function
PJOPAKIP_00028 4.1e-43 nrdH O Glutaredoxin
PJOPAKIP_00029 1e-119 K Helix-turn-helix XRE-family like proteins
PJOPAKIP_00030 1.1e-124 S Protein of unknown function (DUF3990)
PJOPAKIP_00031 1.3e-108 kcsA U Ion channel
PJOPAKIP_00032 1.5e-203 S AAA ATPase domain
PJOPAKIP_00033 0.0 KLT Protein tyrosine kinase
PJOPAKIP_00034 3.2e-138 O Thioredoxin
PJOPAKIP_00036 2e-211 S G5
PJOPAKIP_00037 3e-170 ksgA 2.1.1.182, 2.1.1.184 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PJOPAKIP_00038 1e-176 ispE 2.1.1.182, 2.7.1.148 F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PJOPAKIP_00039 1.4e-110 S LytR cell envelope-related transcriptional attenuator
PJOPAKIP_00040 2.8e-276 cca 2.7.7.19, 2.7.7.72 J Probable RNA and SrmB- binding site of polymerase A
PJOPAKIP_00041 3.4e-127 deoC 3.6.1.13, 3.6.1.17, 3.6.1.55, 3.6.1.61 L Belongs to the Nudix hydrolase family
PJOPAKIP_00042 0.0
PJOPAKIP_00043 0.0 murJ KLT MviN-like protein
PJOPAKIP_00044 1.3e-185 trxB 1.8.1.9, 4.3.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PJOPAKIP_00045 3.9e-222 parB K Belongs to the ParB family
PJOPAKIP_00046 2.5e-175 parA D CobQ CobB MinD ParA nucleotide binding domain protein
PJOPAKIP_00047 3.2e-121 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
PJOPAKIP_00048 1.1e-92 jag S Putative single-stranded nucleic acids-binding domain
PJOPAKIP_00049 2.1e-177 yidC U Membrane protein insertase, YidC Oxa1 family
PJOPAKIP_00050 4e-33 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PJOPAKIP_00051 2.6e-14 rpmH J Belongs to the bacterial ribosomal protein bL34 family
PJOPAKIP_00052 4.6e-285 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PJOPAKIP_00053 9.9e-208 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PJOPAKIP_00054 2.8e-227 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PJOPAKIP_00055 1.6e-82 S Protein of unknown function (DUF721)
PJOPAKIP_00056 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PJOPAKIP_00057 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PJOPAKIP_00058 6.1e-89 S Transmembrane domain of unknown function (DUF3566)
PJOPAKIP_00059 6.3e-276 S ATPase domain predominantly from Archaea
PJOPAKIP_00061 1.1e-256 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
PJOPAKIP_00062 8.3e-70 lrp_3 K helix_turn_helix ASNC type
PJOPAKIP_00063 1.8e-248 E Aminotransferase class I and II
PJOPAKIP_00064 7.2e-55
PJOPAKIP_00069 1.2e-53 L Transposase
PJOPAKIP_00070 9.8e-149 S Protein of unknown function DUF45
PJOPAKIP_00071 1.7e-63 gntK 1.1.1.343, 1.1.1.44, 2.7.1.12, 2.7.1.71 F Shikimate kinase
PJOPAKIP_00072 7.3e-83 dps P Belongs to the Dps family
PJOPAKIP_00073 1.8e-235 ytfL P Transporter associated domain
PJOPAKIP_00074 1.4e-82 S AAA ATPase domain
PJOPAKIP_00075 0.0 V Forkhead associated domain
PJOPAKIP_00076 2.8e-120 cah 4.2.1.1 P Reversible hydration of carbon dioxide
PJOPAKIP_00077 3.8e-107 ahpC 1.11.1.15 O C-terminal domain of 1-Cys peroxiredoxin
PJOPAKIP_00078 0.0 trxB1 1.8.1.9 C Thioredoxin domain
PJOPAKIP_00079 9.5e-239 yhjX EGP Major facilitator Superfamily
PJOPAKIP_00080 1.5e-186 K helix_turn _helix lactose operon repressor
PJOPAKIP_00081 2.1e-310 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PJOPAKIP_00082 1.3e-79
PJOPAKIP_00083 8.5e-156 ybfG M Domain of unknown function (DUF1906)
PJOPAKIP_00085 3.4e-112 ybfG M Domain of unknown function (DUF1906)
PJOPAKIP_00087 8.5e-34 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PJOPAKIP_00088 9.3e-171 L ATPase involved in DNA repair
PJOPAKIP_00089 6.1e-119
PJOPAKIP_00090 4.7e-40 S Sigma-70, region 4
PJOPAKIP_00092 3e-278 M Domain of unknown function (DUF1906)
PJOPAKIP_00093 4.3e-25
PJOPAKIP_00094 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
PJOPAKIP_00095 0.0 yjjP S Threonine/Serine exporter, ThrE
PJOPAKIP_00096 1.9e-300 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PJOPAKIP_00097 6.7e-176 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
PJOPAKIP_00098 0.0 S Amidohydrolase family
PJOPAKIP_00099 5.5e-203 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
PJOPAKIP_00100 3.9e-21 S Protein of unknown function (DUF3073)
PJOPAKIP_00101 3e-108 K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PJOPAKIP_00102 9.8e-211 2.7.13.3 T Histidine kinase
PJOPAKIP_00103 5.3e-235 EGP Major Facilitator Superfamily
PJOPAKIP_00104 3.7e-76 I Sterol carrier protein
PJOPAKIP_00105 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PJOPAKIP_00106 1.7e-31
PJOPAKIP_00107 3.5e-126 gluP 3.4.21.105 S Rhomboid family
PJOPAKIP_00108 5.6e-80 crgA D Involved in cell division
PJOPAKIP_00109 9.5e-112 S Bacterial protein of unknown function (DUF881)
PJOPAKIP_00110 3.9e-237 srtA 3.4.22.70 M Sortase family
PJOPAKIP_00111 5.7e-115 trpG 2.6.1.85 EH para-aminobenzoate synthase glutamine amidotransferase component II
PJOPAKIP_00112 0.0 pknB 2.7.11.1 KLT Protein tyrosine kinase
PJOPAKIP_00113 4.7e-174 T Protein tyrosine kinase
PJOPAKIP_00114 8.6e-260 pbpA M penicillin-binding protein
PJOPAKIP_00115 5.7e-254 rodA D Belongs to the SEDS family
PJOPAKIP_00116 1.6e-278 pstP 3.1.3.16 T Sigma factor PP2C-like phosphatases
PJOPAKIP_00117 4.9e-64 fhaB T Inner membrane component of T3SS, cytoplasmic domain
PJOPAKIP_00118 2.6e-129 fhaA T Protein of unknown function (DUF2662)
PJOPAKIP_00119 0.0 dpp4 3.4.14.5 E Dipeptidyl peptidase IV (DPP IV) N-terminal region
PJOPAKIP_00120 2.9e-212 pldB 3.1.1.5 I Serine aminopeptidase, S33
PJOPAKIP_00121 1.4e-150 P von Willebrand factor type A domain
PJOPAKIP_00122 3e-228 2.7.7.7 L Transposase and inactivated derivatives
PJOPAKIP_00123 8.1e-46
PJOPAKIP_00124 8e-56
PJOPAKIP_00125 3.3e-179 P Sulfate ABC transporter periplasmic sulfate-binding protein
PJOPAKIP_00126 3.6e-176 telA P Toxic anion resistance protein (TelA)
PJOPAKIP_00127 3.1e-92 hsp20 O Hsp20/alpha crystallin family
PJOPAKIP_00128 1.7e-171 yddG EG EamA-like transporter family
PJOPAKIP_00129 4.6e-26
PJOPAKIP_00130 2.6e-262 S Putative esterase
PJOPAKIP_00131 0.0 lysX S Uncharacterised conserved protein (DUF2156)
PJOPAKIP_00132 3.3e-191 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PJOPAKIP_00133 4.3e-109 S Pyridoxamine 5'-phosphate oxidase
PJOPAKIP_00134 1.4e-161 M Glycosyltransferase like family 2
PJOPAKIP_00135 0.0 KL Domain of unknown function (DUF3427)
PJOPAKIP_00136 4.5e-73 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
PJOPAKIP_00137 3.5e-52 ybjQ S Putative heavy-metal-binding
PJOPAKIP_00138 1.2e-91 yjcF Q Acetyltransferase (GNAT) domain
PJOPAKIP_00139 6.9e-134 yplQ S Haemolysin-III related
PJOPAKIP_00141 1e-178 2.7.7.7 L Transposase, Mutator family
PJOPAKIP_00143 3.4e-260 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PJOPAKIP_00144 1.7e-245 degP O Domain present in PSD-95, Dlg, and ZO-1/2.
PJOPAKIP_00145 0.0 cadA P E1-E2 ATPase
PJOPAKIP_00147 1.8e-38 L Transposase and inactivated derivatives IS30 family
PJOPAKIP_00148 3.9e-273 fprA 1.18.1.2, 1.19.1.1 C Pyridine nucleotide-disulphide oxidoreductase
PJOPAKIP_00149 1.5e-172 htpX O Belongs to the peptidase M48B family
PJOPAKIP_00151 3.6e-171 yicL EG EamA-like transporter family
PJOPAKIP_00152 4.4e-197 fbaA 4.1.2.13 G Fructose-bisphosphate aldolase class-II
PJOPAKIP_00153 5.8e-252 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PJOPAKIP_00154 8.2e-282 clcA P Voltage gated chloride channel
PJOPAKIP_00155 3.4e-117 U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PJOPAKIP_00156 8.7e-58 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PJOPAKIP_00157 7.4e-200 K helix_turn _helix lactose operon repressor
PJOPAKIP_00158 6.7e-300 gtfA 2.4.1.329, 2.4.1.7 GH13 G Domain of unknown function (DUF1964)
PJOPAKIP_00159 4.9e-272 scrT G Transporter major facilitator family protein
PJOPAKIP_00160 1.1e-253 yhjE EGP Sugar (and other) transporter
PJOPAKIP_00161 6.9e-203 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PJOPAKIP_00162 4.8e-204 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PJOPAKIP_00163 7e-121 S Psort location Cytoplasmic, score
PJOPAKIP_00164 1e-16 S Psort location Cytoplasmic, score
PJOPAKIP_00165 1.2e-191 K Transcriptional regulator
PJOPAKIP_00166 0.0 3.2.1.10, 3.2.1.20, 3.2.1.93 GH13,GH31 G Alpha-amylase domain
PJOPAKIP_00167 1.5e-186 K Psort location Cytoplasmic, score
PJOPAKIP_00168 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
PJOPAKIP_00169 0.0 malL 3.2.1.1, 5.4.99.16 GH13 G Alpha-amylase domain
PJOPAKIP_00170 6.6e-237 malE G Bacterial extracellular solute-binding protein
PJOPAKIP_00171 4.8e-244 malF G Binding-protein-dependent transport system inner membrane component
PJOPAKIP_00172 2.4e-167 malG G Binding-protein-dependent transport system inner membrane component
PJOPAKIP_00173 0.0 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
PJOPAKIP_00174 9.6e-53 S HAD-hyrolase-like
PJOPAKIP_00175 2.2e-134 traX S TraX protein
PJOPAKIP_00176 1.7e-193 K Psort location Cytoplasmic, score
PJOPAKIP_00177 1.7e-88 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 M Aamy_C
PJOPAKIP_00179 3e-123 K Psort location Cytoplasmic, score
PJOPAKIP_00180 1.2e-226 G Bacterial extracellular solute-binding protein
PJOPAKIP_00181 9.1e-148 P Binding-protein-dependent transport system inner membrane component
PJOPAKIP_00182 1.1e-134 P Binding-protein-dependent transport system inner membrane component
PJOPAKIP_00183 0.0 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
PJOPAKIP_00185 1.8e-08 T Histidine kinase
PJOPAKIP_00186 9.9e-19 K helix_turn_helix, Lux Regulon
PJOPAKIP_00187 0.0 dnaK O Heat shock 70 kDa protein
PJOPAKIP_00188 9.7e-57 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PJOPAKIP_00189 1.6e-169 dnaJ1 O DnaJ molecular chaperone homology domain
PJOPAKIP_00190 2.4e-101 hspR K transcriptional regulator, MerR family
PJOPAKIP_00191 6.1e-128 S HAD hydrolase, family IA, variant 3
PJOPAKIP_00192 2.8e-134 dedA S SNARE associated Golgi protein
PJOPAKIP_00193 1.4e-130 cpaE D bacterial-type flagellum organization
PJOPAKIP_00194 1.7e-201 cpaF U Type II IV secretion system protein
PJOPAKIP_00195 1.4e-113 U Type ii secretion system
PJOPAKIP_00196 2.8e-108 gspF NU Type II secretion system (T2SS), protein F
PJOPAKIP_00197 1.2e-40 S Protein of unknown function (DUF4244)
PJOPAKIP_00198 3.2e-56 S TIGRFAM helicase secretion neighborhood TadE-like protein
PJOPAKIP_00199 7.6e-216 dagK 2.7.1.107 I Diacylglycerol kinase catalytic domain protein
PJOPAKIP_00200 3.7e-100 K Bacterial regulatory proteins, tetR family
PJOPAKIP_00201 0.0 dnaX 2.7.7.7 L DNA polymerase III subunit gamma tau
PJOPAKIP_00202 1.9e-109 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PJOPAKIP_00203 2.7e-132 ask 1.1.1.3, 2.7.2.4 E Amino acid kinase family
PJOPAKIP_00204 9.4e-98 askB 1.1.1.3, 2.7.2.4 E ACT domain
PJOPAKIP_00205 5e-212 asd 1.2.1.11, 1.2.1.12 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PJOPAKIP_00206 2.8e-25
PJOPAKIP_00207 6.7e-154 L Domain of unknown function (DUF4862)
PJOPAKIP_00208 5.1e-147 2.7.1.2 GK ROK family
PJOPAKIP_00209 1.1e-118 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PJOPAKIP_00211 2.3e-239 E Bacterial extracellular solute-binding proteins, family 5 Middle
PJOPAKIP_00212 7.3e-143 oppB6 EP Binding-protein-dependent transport system inner membrane component
PJOPAKIP_00213 0.0 oppD EP Oligopeptide/dipeptide transporter, C-terminal region
PJOPAKIP_00214 3.7e-130 oppF E ATPases associated with a variety of cellular activities
PJOPAKIP_00215 9.2e-170 nanL 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
PJOPAKIP_00216 2.3e-137 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PJOPAKIP_00217 9.1e-162 nagA 3.5.1.25 G Amidohydrolase family
PJOPAKIP_00218 3.7e-114 K FCD
PJOPAKIP_00219 2e-202 nanI 3.2.1.18 GH33 G BNR repeat-like domain
PJOPAKIP_00220 4.6e-103 L Helix-turn-helix domain
PJOPAKIP_00221 7.1e-115
PJOPAKIP_00222 5.3e-41 pbpB 2.7.11.1, 3.4.16.4 S PASTA domain
PJOPAKIP_00223 4.3e-64 S Beta-lactamase enzyme family
PJOPAKIP_00224 1.6e-207 pbpB 2.7.11.1, 3.4.16.4 S PASTA domain
PJOPAKIP_00225 3.4e-248 S Calcineurin-like phosphoesterase
PJOPAKIP_00226 1e-156 pbpB 2.7.11.1, 3.4.16.4 S PASTA domain
PJOPAKIP_00227 5.5e-31 T Domain of unknown function (DUF4234)
PJOPAKIP_00228 2.1e-20 T Domain of unknown function (DUF4234)
PJOPAKIP_00229 0.0 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PJOPAKIP_00230 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
PJOPAKIP_00231 7.5e-172 3.6.1.27 I PAP2 superfamily
PJOPAKIP_00232 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PJOPAKIP_00233 3.4e-121 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PJOPAKIP_00234 1.2e-208 holB 2.7.7.7 L DNA polymerase III
PJOPAKIP_00235 2e-108 S Phosphatidylethanolamine-binding protein
PJOPAKIP_00236 0.0 pepD E Peptidase family C69
PJOPAKIP_00237 1.4e-289 fhs 1.5.1.5, 3.5.4.9, 6.3.4.3 F Formate-tetrahydrofolate ligase
PJOPAKIP_00238 5.1e-62 S Macrophage migration inhibitory factor (MIF)
PJOPAKIP_00239 4.6e-96 S GtrA-like protein
PJOPAKIP_00240 6.5e-260 EGP Major facilitator Superfamily
PJOPAKIP_00241 3.1e-124 3.1.3.3, 3.1.3.73 G Phosphoglycerate mutase family
PJOPAKIP_00242 5.1e-101
PJOPAKIP_00243 1.7e-78 K helix_turn_helix, Deoxyribose operon repressor
PJOPAKIP_00244 4.3e-126 yeaD 4.2.1.9, 5.1.3.15 G Aldose 1-epimerase
PJOPAKIP_00245 1.5e-53 S Protein of unknown function (DUF805)
PJOPAKIP_00246 1.1e-294 gltX 6.1.1.17 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PJOPAKIP_00249 1.2e-64
PJOPAKIP_00250 2.2e-135 yoaK S Protein of unknown function (DUF1275)
PJOPAKIP_00251 1.7e-244 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PJOPAKIP_00253 9.1e-311
PJOPAKIP_00254 0.0 efeU_1 P Iron permease FTR1 family
PJOPAKIP_00255 2.5e-108 tpd P Fe2+ transport protein
PJOPAKIP_00256 4.8e-227 S Predicted membrane protein (DUF2318)
PJOPAKIP_00257 1.4e-213 macB_2 V ABC transporter permease
PJOPAKIP_00258 5.4e-215 Z012_06715 V FtsX-like permease family
PJOPAKIP_00259 2.6e-146 macB V ABC transporter, ATP-binding protein
PJOPAKIP_00260 2.8e-65 S FMN_bind
PJOPAKIP_00261 2e-106 K Psort location Cytoplasmic, score 8.87
PJOPAKIP_00262 9.5e-308 pip S YhgE Pip domain protein
PJOPAKIP_00263 0.0 pip S YhgE Pip domain protein
PJOPAKIP_00265 3.9e-240 S Putative ABC-transporter type IV
PJOPAKIP_00266 1.1e-272 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PJOPAKIP_00267 6.4e-151 pgl 3.1.1.31, 3.5.99.6 G Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
PJOPAKIP_00268 3.3e-194 opcA G Glucose-6-phosphate dehydrogenase subunit
PJOPAKIP_00269 7.8e-304 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PJOPAKIP_00271 0.0 pepD E Peptidase family C69
PJOPAKIP_00272 1.1e-197 XK27_01805 M Glycosyltransferase like family 2
PJOPAKIP_00273 8.1e-139 icaR K Bacterial regulatory proteins, tetR family
PJOPAKIP_00274 1.4e-170 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PJOPAKIP_00275 4.5e-228 amt U Ammonium Transporter Family
PJOPAKIP_00276 1e-54 glnB K Nitrogen regulatory protein P-II
PJOPAKIP_00277 0.0 2.7.7.19, 2.7.7.59 O Nucleotidyltransferase domain
PJOPAKIP_00278 6.5e-236 dinF V MatE
PJOPAKIP_00279 6.1e-258 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PJOPAKIP_00280 2.7e-261 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Domain of unknown function (DUF1727)
PJOPAKIP_00281 2.2e-142 cobQ S CobB/CobQ-like glutamine amidotransferase domain
PJOPAKIP_00282 2.7e-32 S granule-associated protein
PJOPAKIP_00283 0.0 ubiB S ABC1 family
PJOPAKIP_00284 3.3e-144 yggS S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PJOPAKIP_00285 8.2e-108 pepE 3.4.13.21 E Peptidase family S51
PJOPAKIP_00286 1.4e-192 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PJOPAKIP_00287 4.5e-143 D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
PJOPAKIP_00288 4.6e-48 rpsF J Binds together with S18 to 16S ribosomal RNA
PJOPAKIP_00289 2e-70 ssb1 L Single-stranded DNA-binding protein
PJOPAKIP_00290 2.6e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PJOPAKIP_00291 8.6e-70 rplI J Binds to the 23S rRNA
PJOPAKIP_00293 3e-38 ptsH G phosphoenolpyruvate-dependent sugar phosphotransferase system
PJOPAKIP_00294 3.1e-277 ptsP 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PJOPAKIP_00295 7.6e-124 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
PJOPAKIP_00296 0.0 pacS 1.9.3.1, 3.6.3.54 P E1-E2 ATPase
PJOPAKIP_00297 1.6e-42 csoR S Metal-sensitive transcriptional repressor
PJOPAKIP_00298 5e-188 rmuC S RmuC family
PJOPAKIP_00299 4.7e-98 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PJOPAKIP_00300 2.4e-161 spoU 2.1.1.185 J RNA methyltransferase TrmH family
PJOPAKIP_00301 3.5e-185 K Psort location Cytoplasmic, score
PJOPAKIP_00302 2e-50 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PJOPAKIP_00303 2.9e-290 gatA 6.3.5.6, 6.3.5.7 F Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PJOPAKIP_00304 1.2e-285 gatB 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PJOPAKIP_00305 3.6e-199 2.3.1.57 J Acetyltransferase (GNAT) domain
PJOPAKIP_00306 3.3e-52 S Protein of unknown function (DUF2469)
PJOPAKIP_00307 1.3e-273 3.1.3.2, 3.6.1.27 I phosphatidate phosphatase activity
PJOPAKIP_00308 0.0 5.4.99.9 H Flavin containing amine oxidoreductase
PJOPAKIP_00309 1.6e-256 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PJOPAKIP_00310 1.8e-63 tyrA 5.4.99.5 E Chorismate mutase type II
PJOPAKIP_00311 2.3e-303 S domain protein
PJOPAKIP_00312 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PJOPAKIP_00313 5.7e-283 E Bacterial extracellular solute-binding proteins, family 5 Middle
PJOPAKIP_00314 2.7e-131 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PJOPAKIP_00315 1.3e-132 KT Transcriptional regulatory protein, C terminal
PJOPAKIP_00316 9e-101
PJOPAKIP_00317 1.7e-94 mntP P Probably functions as a manganese efflux pump
PJOPAKIP_00318 2.8e-90 ppa 3.6.1.1 C Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
PJOPAKIP_00319 0.0 glgE 2.4.99.16 GH13 G Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB
PJOPAKIP_00320 0.0 K RNA polymerase II activating transcription factor binding
PJOPAKIP_00321 1.1e-12 S Putative phage holin Dp-1
PJOPAKIP_00322 3.2e-39
PJOPAKIP_00325 2.3e-206 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PJOPAKIP_00326 4.6e-138 atpB C it plays a direct role in the translocation of protons across the membrane
PJOPAKIP_00327 1.6e-27 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PJOPAKIP_00328 4.2e-60 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PJOPAKIP_00329 3.3e-147 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PJOPAKIP_00330 1.7e-309 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PJOPAKIP_00331 1.2e-163 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PJOPAKIP_00332 8e-282 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PJOPAKIP_00333 4.2e-49 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PJOPAKIP_00334 5e-134 nucS L Cleaves both 3' and 5' ssDNA extremities of branched DNA structures
PJOPAKIP_00335 7.3e-159 fkbB 5.2.1.8 M FKBP-type peptidyl-prolyl cis-trans isomerase
PJOPAKIP_00336 2.6e-189
PJOPAKIP_00337 2.4e-184
PJOPAKIP_00338 7.4e-167 trxA2 O Tetratricopeptide repeat
PJOPAKIP_00339 2.4e-118 cyaA 4.6.1.1 S CYTH
PJOPAKIP_00341 1e-63 psp1 3.5.99.10 J Endoribonuclease L-PSP
PJOPAKIP_00342 1.8e-182 plsC2 2.3.1.51 I Phosphate acyltransferases
PJOPAKIP_00343 4.6e-180 gpsA 1.1.1.94 I NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
PJOPAKIP_00344 7e-228 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PJOPAKIP_00345 9.2e-183 P Bacterial extracellular solute-binding protein
PJOPAKIP_00346 4.4e-164 U Binding-protein-dependent transport system inner membrane component
PJOPAKIP_00347 3.2e-137 U Binding-protein-dependent transport system inner membrane component
PJOPAKIP_00348 3.2e-226 3.6.3.30 E Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
PJOPAKIP_00349 5.3e-176 S CAAX protease self-immunity
PJOPAKIP_00350 1.9e-128 M Mechanosensitive ion channel
PJOPAKIP_00351 1.6e-271 aspA 4.3.1.1 E Fumarase C C-terminus
PJOPAKIP_00352 3.6e-134 K Bacterial regulatory proteins, tetR family
PJOPAKIP_00353 3.8e-241 MA20_36090 S Psort location Cytoplasmic, score 8.87
PJOPAKIP_00354 6.3e-90 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PJOPAKIP_00355 5.8e-11 XK27_04590 S NADPH-dependent FMN reductase
PJOPAKIP_00360 2.8e-23 yxiO G Major facilitator Superfamily
PJOPAKIP_00361 2.1e-22
PJOPAKIP_00362 1.3e-183 K Helix-turn-helix XRE-family like proteins
PJOPAKIP_00363 1.8e-229 yxiO S Vacuole effluxer Atg22 like
PJOPAKIP_00364 1.2e-196 yegV G pfkB family carbohydrate kinase
PJOPAKIP_00365 5.5e-29 rpmB J Ribosomal L28 family
PJOPAKIP_00366 0.0 recG 3.6.4.12 L helicase superfamily c-terminal domain
PJOPAKIP_00367 3.1e-114 S Sulfite exporter TauE/SafE
PJOPAKIP_00368 6.8e-199 QT Purine catabolism regulatory protein-like family
PJOPAKIP_00369 2.1e-260 2.6.1.55 H Aminotransferase class-III
PJOPAKIP_00370 1.3e-202 C Iron-containing alcohol dehydrogenase
PJOPAKIP_00371 6.2e-137 S Amidohydrolase family
PJOPAKIP_00372 2.8e-118 uidB G MFS/sugar transport protein
PJOPAKIP_00373 1.3e-152 tauC U Binding-protein-dependent transport system inner membrane component
PJOPAKIP_00374 1.1e-182 tauA P Substrate binding domain of ABC-type glycine betaine transport system
PJOPAKIP_00375 5.1e-156 tauB 3.6.3.36 P ATPases associated with a variety of cellular activities
PJOPAKIP_00376 5.7e-84 rsmD 2.1.1.171 L Conserved hypothetical protein 95
PJOPAKIP_00377 1.2e-151 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PJOPAKIP_00378 0.0 yegQ O Peptidase family U32 C-terminal domain
PJOPAKIP_00379 6.7e-184 yfiH Q Multi-copper polyphenol oxidoreductase laccase
PJOPAKIP_00380 1.1e-158 ispD 1.1.1.405, 2.7.7.40, 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PJOPAKIP_00381 1.1e-124 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PJOPAKIP_00382 1.7e-59 D nuclear chromosome segregation
PJOPAKIP_00383 2.1e-268 pepC 3.4.22.40 E Peptidase C1-like family
PJOPAKIP_00384 1.6e-218 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PJOPAKIP_00385 5.5e-236 aroG 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
PJOPAKIP_00386 1.6e-123 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PJOPAKIP_00387 9.4e-242 EGP Sugar (and other) transporter
PJOPAKIP_00388 5.1e-243 senX3 2.7.13.3 T His Kinase A (phosphoacceptor) domain
PJOPAKIP_00389 6.1e-140 KT Transcriptional regulatory protein, C terminal
PJOPAKIP_00390 4.8e-194 pstS P Part of the ABC transporter complex PstSACB involved in phosphate import
PJOPAKIP_00391 1.7e-139 pstC P probably responsible for the translocation of the substrate across the membrane
PJOPAKIP_00392 1.1e-173 pstA P Phosphate transport system permease
PJOPAKIP_00393 1.2e-148 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PJOPAKIP_00394 6.7e-91 lemA S LemA family
PJOPAKIP_00395 0.0 S Predicted membrane protein (DUF2207)
PJOPAKIP_00396 7.5e-173 S Predicted membrane protein (DUF2207)
PJOPAKIP_00397 2.2e-15
PJOPAKIP_00398 4.8e-170 1.1.1.65 C Oxidoreductase, aldo keto reductase family protein
PJOPAKIP_00399 3.8e-201 iunH1 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PJOPAKIP_00400 1.7e-12 K helix_turn _helix lactose operon repressor
PJOPAKIP_00401 4.6e-166 2.7.11.1 S Pfam:HipA_N
PJOPAKIP_00402 2.8e-45 K Helix-turn-helix XRE-family like proteins
PJOPAKIP_00403 6.8e-110 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PJOPAKIP_00404 6.1e-35 CP_0960 S Belongs to the UPF0109 family
PJOPAKIP_00405 3.9e-57 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PJOPAKIP_00406 6.8e-100 L Psort location Cytoplasmic, score 8.87
PJOPAKIP_00407 6.7e-142 pabC 2.6.1.42, 2.6.1.85, 4.1.3.38 E branched-chain-amino-acid transaminase activity
PJOPAKIP_00408 9.3e-272 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH chorismate binding enzyme
PJOPAKIP_00409 1.2e-210 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PJOPAKIP_00410 5.2e-113 ribE 2.5.1.9 H Lumazine binding domain
PJOPAKIP_00411 2.4e-236 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PJOPAKIP_00412 1.5e-80 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PJOPAKIP_00413 4.8e-170 S Endonuclease/Exonuclease/phosphatase family
PJOPAKIP_00414 1.2e-263 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PJOPAKIP_00415 2.3e-162 P Cation efflux family
PJOPAKIP_00416 0.0 cysS 6.1.1.16 J Belongs to the class-I aminoacyl-tRNA synthetase family
PJOPAKIP_00417 2e-136 guaA1 6.3.5.2 F Peptidase C26
PJOPAKIP_00418 0.0 yjjK S ABC transporter
PJOPAKIP_00419 5.6e-63 vapC S Toxic component of a toxin-antitoxin (TA) module. An RNase
PJOPAKIP_00420 8.6e-44 stbC S Plasmid stability protein
PJOPAKIP_00421 5.8e-92 ilvN 2.2.1.6 E ACT domain
PJOPAKIP_00422 0.0 ilvB 2.2.1.6 H Thiamine pyrophosphate enzyme, central domain
PJOPAKIP_00423 2e-132 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PJOPAKIP_00424 7.6e-31 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PJOPAKIP_00425 6.3e-119 yceD S Uncharacterized ACR, COG1399
PJOPAKIP_00426 3.6e-120
PJOPAKIP_00427 2.1e-88 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PJOPAKIP_00428 2e-51 S Protein of unknown function (DUF3039)
PJOPAKIP_00429 1e-195 yghZ C Aldo/keto reductase family
PJOPAKIP_00430 6.9e-118
PJOPAKIP_00431 4.2e-250 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PJOPAKIP_00432 8.1e-162
PJOPAKIP_00433 4.1e-144 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
PJOPAKIP_00434 5.8e-135 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PJOPAKIP_00436 7.2e-239 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
PJOPAKIP_00437 5.7e-255 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
PJOPAKIP_00438 2e-228 murN 2.3.2.16 V Psort location Cytoplasmic, score 8.87
PJOPAKIP_00439 9.2e-173 S Auxin Efflux Carrier
PJOPAKIP_00442 0.0 pgi 5.3.1.9 G Belongs to the GPI family
PJOPAKIP_00443 4.7e-255 abcT3 P ATPases associated with a variety of cellular activities
PJOPAKIP_00444 0.0 opuAB P Binding-protein-dependent transport system inner membrane component
PJOPAKIP_00445 1.1e-59 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PJOPAKIP_00446 9.6e-139 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PJOPAKIP_00447 2.7e-154 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PJOPAKIP_00448 1.2e-208 K helix_turn _helix lactose operon repressor
PJOPAKIP_00449 4.7e-94 uhpT EGP Major facilitator Superfamily
PJOPAKIP_00450 2.9e-137 alfA 3.2.1.51 GH29 G Alpha-L-fucosidase
PJOPAKIP_00451 1.3e-124 insK L Integrase core domain
PJOPAKIP_00452 7.6e-30 L Helix-turn-helix domain
PJOPAKIP_00453 4.6e-281 L PFAM Integrase catalytic
PJOPAKIP_00454 5e-28 L Helix-turn-helix domain
PJOPAKIP_00455 4.1e-299 5.1.3.37 P Domain of unknown function (DUF4143)
PJOPAKIP_00456 2.4e-135 S Peptidase C26
PJOPAKIP_00457 1.1e-222 S Psort location CytoplasmicMembrane, score 9.99
PJOPAKIP_00458 3.4e-218 vex3 V ABC transporter permease
PJOPAKIP_00459 3.7e-208 vex1 V Efflux ABC transporter, permease protein
PJOPAKIP_00460 1.7e-111 vex2 V ABC transporter, ATP-binding protein
PJOPAKIP_00461 0.0 fadD 6.2.1.3 I AMP-binding enzyme
PJOPAKIP_00462 1.4e-28 araE EGP Major facilitator Superfamily
PJOPAKIP_00463 2.7e-201 cydD V ABC transporter transmembrane region
PJOPAKIP_00464 0.0 cydD V ABC transporter transmembrane region
PJOPAKIP_00465 0.0 bga1 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PJOPAKIP_00466 3.9e-190 K helix_turn _helix lactose operon repressor
PJOPAKIP_00467 5.3e-185 ganB 3.2.1.89 G Glycosyl hydrolase family 53
PJOPAKIP_00468 3.2e-169 dkgA 1.1.1.346 S Oxidoreductase, aldo keto reductase family protein
PJOPAKIP_00469 1.4e-136 L Protein of unknown function (DUF1524)
PJOPAKIP_00470 1.3e-265 S Domain of unknown function (DUF4143)
PJOPAKIP_00471 4.3e-221 mntH P H( )-stimulated, divalent metal cation uptake system
PJOPAKIP_00472 1.1e-279 EGP Major facilitator Superfamily
PJOPAKIP_00473 1.3e-229 rfbP M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
PJOPAKIP_00474 3.4e-223 pflA S Protein of unknown function (DUF4012)
PJOPAKIP_00475 2.1e-181 wcoI DM Psort location CytoplasmicMembrane, score
PJOPAKIP_00477 3.4e-166 rgpAc GT4 M Domain of unknown function (DUF1972)
PJOPAKIP_00478 6.1e-171 rfaG3 M Glycosyl transferase 4-like domain
PJOPAKIP_00479 4.4e-60 2.3.1.30 E Bacterial transferase hexapeptide (six repeats)
PJOPAKIP_00480 6.4e-33 M Glycosyltransferase like family 2
PJOPAKIP_00481 3.2e-18 M O-Antigen ligase
PJOPAKIP_00482 9.8e-139 S Psort location CytoplasmicMembrane, score 9.99
PJOPAKIP_00483 5.2e-119 C Polysaccharide pyruvyl transferase
PJOPAKIP_00484 1.1e-49 S Core-2 I-Branching enzyme
PJOPAKIP_00485 3.3e-202 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PJOPAKIP_00486 1.2e-274 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PJOPAKIP_00487 1.5e-161 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PJOPAKIP_00488 7e-17 L transposase activity
PJOPAKIP_00489 1.8e-08
PJOPAKIP_00490 1.1e-20
PJOPAKIP_00491 7.8e-60
PJOPAKIP_00492 7.5e-71 3.1.3.48 T Low molecular weight phosphatase family
PJOPAKIP_00493 8.9e-47
PJOPAKIP_00494 2.4e-25 K Cro/C1-type HTH DNA-binding domain
PJOPAKIP_00495 1.2e-41 K sequence-specific DNA binding
PJOPAKIP_00496 5.7e-130 S G5
PJOPAKIP_00497 1e-55 trxA 1.8.1.8, 1.8.1.9 O Belongs to the thioredoxin family
PJOPAKIP_00498 1e-116 F Domain of unknown function (DUF4916)
PJOPAKIP_00499 2.4e-161 mhpC I Alpha/beta hydrolase family
PJOPAKIP_00500 5.1e-232 nudC 1.3.7.1, 3.6.1.22 L NADH pyrophosphatase zinc ribbon domain
PJOPAKIP_00501 4.2e-71 gcvH E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein
PJOPAKIP_00502 1.2e-236 S Uncharacterized conserved protein (DUF2183)
PJOPAKIP_00503 0.0 ptrB 3.4.21.83 E Peptidase, S9A B C family, catalytic domain protein
PJOPAKIP_00504 1.8e-192 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PJOPAKIP_00505 1.6e-205 lplA 6.3.1.20 H Biotin/lipoate A/B protein ligase family
PJOPAKIP_00506 1.4e-133 glxR K helix_turn_helix, cAMP Regulatory protein
PJOPAKIP_00507 0.0 pon1 2.4.1.129, 3.4.16.4 GT51 M Transglycosylase
PJOPAKIP_00508 2.3e-243 namA 1.6.99.1 C NADH:flavin oxidoreductase / NADH oxidase family
PJOPAKIP_00509 1.5e-227 pyrD 1.3.1.14, 1.3.5.2, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor
PJOPAKIP_00510 2.8e-123 glpR K DeoR C terminal sensor domain
PJOPAKIP_00511 1.9e-252 galT 2.7.7.12 C Galactose-1-phosphate uridyl transferase, N-terminal domain
PJOPAKIP_00512 4.9e-232 galK 2.7.1.6, 2.7.7.12 G Belongs to the GHMP kinase family. GalK subfamily
PJOPAKIP_00513 1.9e-43 gcvR T Belongs to the UPF0237 family
PJOPAKIP_00514 3.6e-252 S UPF0210 protein
PJOPAKIP_00515 7e-116 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PJOPAKIP_00516 6.1e-169 mutY 2.1.1.37, 2.1.3.15, 6.4.1.2 L FES
PJOPAKIP_00517 1.7e-107
PJOPAKIP_00518 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PJOPAKIP_00519 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PJOPAKIP_00520 3.5e-212 yhcD NU usher protein
PJOPAKIP_00522 1.8e-135 2.7.11.1 T Forkhead associated domain
PJOPAKIP_00523 8.9e-130
PJOPAKIP_00524 1.1e-94 T Forkhead associated domain
PJOPAKIP_00525 9.1e-81 B Belongs to the OprB family
PJOPAKIP_00526 8.6e-173 3.1.3.16 T Sigma factor PP2C-like phosphatases
PJOPAKIP_00527 0.0 E Transglutaminase-like superfamily
PJOPAKIP_00528 1.1e-228 S Protein of unknown function DUF58
PJOPAKIP_00529 3.8e-226 S ATPase family associated with various cellular activities (AAA)
PJOPAKIP_00530 0.0 S Fibronectin type 3 domain
PJOPAKIP_00531 4e-262 KLT Protein tyrosine kinase
PJOPAKIP_00532 0.0 uvrD 3.6.4.12 L PD-(D/E)XK nuclease superfamily
PJOPAKIP_00533 0.0 uvrD2 3.6.4.12 L Belongs to the helicase family. UvrD subfamily
PJOPAKIP_00534 1.7e-235 G Major Facilitator Superfamily
PJOPAKIP_00535 9.2e-133 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PJOPAKIP_00536 1.1e-164 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PJOPAKIP_00537 0.0 rnj J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PJOPAKIP_00538 0.0 pepN 3.4.11.2 E Peptidase family M1 domain
PJOPAKIP_00539 5.5e-129 S Sulfite exporter TauE/SafE
PJOPAKIP_00540 4.4e-55 3.1.21.5 KL Type III restriction enzyme res subunit
PJOPAKIP_00545 1.4e-13 esxU S Proteins of 100 residues with WXG
PJOPAKIP_00546 3.8e-18 S Excreted virulence factor EspC, type VII ESX diderm
PJOPAKIP_00548 2.6e-118 O Subtilase family
PJOPAKIP_00549 7.4e-62
PJOPAKIP_00551 7.7e-143 O Type VII secretion system ESX-1, transport TM domain B
PJOPAKIP_00552 8.8e-153 O Type VII secretion system ESX-1, transport TM domain B
PJOPAKIP_00553 3.9e-153 snm S WXG100 protein secretion system (Wss), protein YukD
PJOPAKIP_00554 1.3e-08 esxU S Proteins of 100 residues with WXG
PJOPAKIP_00555 2.4e-33 S Proteins of 100 residues with WXG
PJOPAKIP_00557 4.6e-125 O Subtilase family
PJOPAKIP_00558 9.2e-129 O Subtilase family
PJOPAKIP_00559 2.8e-27
PJOPAKIP_00560 6.2e-61
PJOPAKIP_00561 9.6e-50
PJOPAKIP_00562 6.6e-84
PJOPAKIP_00563 2.2e-35
PJOPAKIP_00564 8.4e-85
PJOPAKIP_00565 2.2e-54 T Forkhead associated domain
PJOPAKIP_00566 0.0 eccCa D FtsK/SpoIIIE family
PJOPAKIP_00567 2.2e-257 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PJOPAKIP_00568 4.8e-122 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PJOPAKIP_00569 9e-252 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
PJOPAKIP_00570 1.9e-206 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PJOPAKIP_00571 8.5e-178 ftsE D Cell division ATP-binding protein FtsE
PJOPAKIP_00572 4.4e-161 ftsX D Part of the ABC transporter FtsEX involved in cellular division
PJOPAKIP_00573 4.2e-168 usp 3.5.1.28 CBM50 D CHAP domain protein
PJOPAKIP_00574 1.8e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
PJOPAKIP_00575 1.3e-144 pknD ET ABC transporter, substrate-binding protein, family 3
PJOPAKIP_00576 6.2e-163 pknD ET ABC transporter, substrate-binding protein, family 3
PJOPAKIP_00577 1.8e-149 yecS E Binding-protein-dependent transport system inner membrane component
PJOPAKIP_00578 2.4e-150 tcyC 3.6.3.21 E ATPases associated with a variety of cellular activities
PJOPAKIP_00579 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PJOPAKIP_00580 1.8e-141 rluA 5.4.99.28, 5.4.99.29 J RNA pseudouridylate synthase
PJOPAKIP_00581 2.5e-138 K Periplasmic binding protein domain
PJOPAKIP_00582 0.0 lacZ5 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PJOPAKIP_00583 5.9e-81 K helix_turn _helix lactose operon repressor
PJOPAKIP_00584 2.9e-273 G Bacterial extracellular solute-binding protein
PJOPAKIP_00585 5e-142 coaX 2.7.1.33 H Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PJOPAKIP_00586 5.3e-245 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PJOPAKIP_00587 1.1e-282 E ABC transporter, substrate-binding protein, family 5
PJOPAKIP_00588 5.4e-162 P Binding-protein-dependent transport system inner membrane component
PJOPAKIP_00589 2.5e-146 EP Binding-protein-dependent transport system inner membrane component
PJOPAKIP_00590 2.3e-157 oppD EP oligopeptide transport protein of the ABC superfamily, ATP-binding component
PJOPAKIP_00591 9.9e-138 sapF E ATPases associated with a variety of cellular activities
PJOPAKIP_00592 2.3e-201 cbs 2.5.1.47, 4.2.1.22 E Pyridoxal-phosphate dependent enzyme
PJOPAKIP_00593 2.8e-221 metB 2.5.1.48, 4.4.1.1, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PJOPAKIP_00594 4.1e-298 enhA_2 S L,D-transpeptidase catalytic domain
PJOPAKIP_00595 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
PJOPAKIP_00596 2.1e-93 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PJOPAKIP_00597 8.4e-104 cysE 2.3.1.178 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
PJOPAKIP_00598 4.8e-196 S Domain of unknown function (DUF4143)
PJOPAKIP_00599 4.5e-45 gepA S Protein of unknown function (DUF4065)
PJOPAKIP_00600 1.4e-78 2.7.6.5 S Region found in RelA / SpoT proteins
PJOPAKIP_00601 3.6e-274 yhdG E aromatic amino acid transport protein AroP K03293
PJOPAKIP_00602 7.7e-263 alr 5.1.1.1 M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PJOPAKIP_00603 1.3e-248 dgt 3.1.5.1 F Phosphohydrolase-associated domain
PJOPAKIP_00604 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PJOPAKIP_00605 2e-155 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
PJOPAKIP_00606 6e-117 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
PJOPAKIP_00607 0.0 EK Alanine-glyoxylate amino-transferase
PJOPAKIP_00608 1.7e-168 iaaA 3.4.19.5, 3.5.1.1 E Asparaginase
PJOPAKIP_00610 4e-215 ybiR P Citrate transporter
PJOPAKIP_00611 1.5e-26
PJOPAKIP_00612 0.0 G Alpha-L-arabinofuranosidase C-terminal domain
PJOPAKIP_00613 8.6e-159 K Helix-turn-helix domain, rpiR family
PJOPAKIP_00614 1.6e-219 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PJOPAKIP_00616 5.9e-130 V ATPases associated with a variety of cellular activities
PJOPAKIP_00617 5.4e-140 M Conserved repeat domain
PJOPAKIP_00618 1.1e-249 macB_8 V MacB-like periplasmic core domain
PJOPAKIP_00619 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PJOPAKIP_00620 7.7e-180 adh3 C Zinc-binding dehydrogenase
PJOPAKIP_00621 1.6e-85 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PJOPAKIP_00622 1.2e-224 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PJOPAKIP_00623 1.2e-68 zur P Belongs to the Fur family
PJOPAKIP_00624 4.8e-83 ylbB V FtsX-like permease family
PJOPAKIP_00625 3.8e-27 ylbB V FtsX-like permease family
PJOPAKIP_00626 1.1e-69 XK27_06785 V ABC transporter
PJOPAKIP_00627 1.1e-44 tetR K Transcriptional regulator C-terminal region
PJOPAKIP_00628 5.5e-64
PJOPAKIP_00629 6.4e-54 zur P Ferric uptake regulator family
PJOPAKIP_00630 1.6e-137 S TIGRFAM TIGR03943 family protein
PJOPAKIP_00631 6.7e-172 ycgR S Predicted permease
PJOPAKIP_00632 1.7e-09 adcA P ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
PJOPAKIP_00633 2.6e-19 J Ribosomal L32p protein family
PJOPAKIP_00634 1.1e-14 rpmJ J Ribosomal protein L36
PJOPAKIP_00635 4.4e-34 rpmE2 J Ribosomal protein L31
PJOPAKIP_00636 2.7e-43 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PJOPAKIP_00637 1.4e-20 rpmG J Ribosomal protein L33
PJOPAKIP_00638 3.9e-29 rpmB J Ribosomal L28 family
PJOPAKIP_00639 5.2e-99 S cobalamin synthesis protein
PJOPAKIP_00640 1.6e-142 P Zinc-uptake complex component A periplasmic
PJOPAKIP_00641 0.0 XK27_08315 M Psort location CytoplasmicMembrane, score 9.26
PJOPAKIP_00642 8.9e-11 3.2.1.23 G Domain of unknown function (DUF4982)
PJOPAKIP_00643 1.2e-273 aldH 1.2.1.3, 1.2.1.5 C Aldehyde dehydrogenase family
PJOPAKIP_00644 9.1e-242 purD 6.3.4.13 F Belongs to the GARS family
PJOPAKIP_00645 3.1e-187 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PJOPAKIP_00646 1.2e-293 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PJOPAKIP_00647 2e-202 dam 2.1.1.72 L D12 class N6 adenine-specific DNA methyltransferase
PJOPAKIP_00648 2.4e-175 dam 2.1.1.72 L D12 class N6 adenine-specific DNA methyltransferase
PJOPAKIP_00649 0.0 alwI L AlwI restriction endonuclease
PJOPAKIP_00650 8.6e-298 umuC 2.7.7.7 L DNA-damage repair protein (DNA polymerase IV) K00961
PJOPAKIP_00651 1.6e-32
PJOPAKIP_00652 8.7e-45 C Aldo/keto reductase family
PJOPAKIP_00653 1.7e-238 C Na H antiporter family protein
PJOPAKIP_00654 1.2e-101 mug 3.2.2.28 L Uracil DNA glycosylase superfamily
PJOPAKIP_00655 2.4e-08 S Protein of unknown function (DUF4230)
PJOPAKIP_00658 1.5e-29 S Protein of unknown function (DUF4230)
PJOPAKIP_00659 1.9e-144
PJOPAKIP_00660 1.9e-113 Q D-alanine [D-alanyl carrier protein] ligase activity
PJOPAKIP_00661 4.7e-260 Q D-alanine [D-alanyl carrier protein] ligase activity
PJOPAKIP_00662 5.3e-229 I alpha/beta hydrolase fold
PJOPAKIP_00663 0.0 purL 6.3.5.3 F CobB/CobQ-like glutamine amidotransferase domain
PJOPAKIP_00664 4.3e-138 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PJOPAKIP_00665 1.6e-61 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PJOPAKIP_00666 1.7e-206 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PJOPAKIP_00667 3.2e-209 M Glycosyl transferase 4-like domain
PJOPAKIP_00668 4.1e-192 ltaE 4.1.2.48 E Beta-eliminating lyase
PJOPAKIP_00670 4.1e-187 yocS S SBF-like CPA transporter family (DUF4137)
PJOPAKIP_00672 9.3e-62 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PJOPAKIP_00673 3.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PJOPAKIP_00674 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PJOPAKIP_00675 8.1e-232 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PJOPAKIP_00676 6e-129 tmp1 S Domain of unknown function (DUF4391)
PJOPAKIP_00677 2.3e-145 rlrG K Bacterial regulatory helix-turn-helix protein, lysR family
PJOPAKIP_00678 1.5e-184 MA20_14895 S Conserved hypothetical protein 698
PJOPAKIP_00679 7.8e-61 S Psort location CytoplasmicMembrane, score
PJOPAKIP_00680 6.8e-57 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PJOPAKIP_00681 8.4e-88 D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PJOPAKIP_00682 5.4e-192 1.1.1.1, 1.1.1.14 C Zinc-binding dehydrogenase
PJOPAKIP_00683 2.1e-255 S Domain of unknown function (DUF4143)
PJOPAKIP_00684 1.1e-08 effR K helix_turn_helix multiple antibiotic resistance protein
PJOPAKIP_00685 6.8e-295 rfbP 2.7.8.6 M Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
PJOPAKIP_00686 4.5e-106 3.1.3.48 T Low molecular weight phosphatase family
PJOPAKIP_00687 1.9e-223 S Psort location CytoplasmicMembrane, score 9.99
PJOPAKIP_00688 0.0 3.1.1.53, 3.2.1.78 GH26 M Belongs to the glycosyl hydrolase 43 family
PJOPAKIP_00689 6.2e-202 M Psort location Cytoplasmic, score 8.87
PJOPAKIP_00690 3.4e-209 MA20_17390 GT4 M Glycosyl transferases group 1
PJOPAKIP_00691 4.5e-120 S EpsG family
PJOPAKIP_00692 6.5e-102 2.4.1.166 GT2 M Glycosyltransferase like family 2
PJOPAKIP_00693 5.7e-122 M Glycosyltransferase like family 2
PJOPAKIP_00694 3.1e-65 epsI GM Polysaccharide pyruvyl transferase
PJOPAKIP_00695 8.3e-111 cps2J S Polysaccharide biosynthesis protein
PJOPAKIP_00696 4e-11 L transposase activity
PJOPAKIP_00697 5.1e-10 L PFAM Integrase catalytic
PJOPAKIP_00698 5.7e-47 L Transposase and inactivated derivatives IS30 family
PJOPAKIP_00699 2.9e-110 L Transposase, Mutator family
PJOPAKIP_00700 2.4e-34 S Core-2/I-Branching enzyme
PJOPAKIP_00701 7.1e-195 wcoI DM Psort location CytoplasmicMembrane, score
PJOPAKIP_00702 1.2e-31 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PJOPAKIP_00703 1.1e-22
PJOPAKIP_00704 5.7e-94
PJOPAKIP_00705 4.9e-302 2.1.1.107, 2.1.1.294, 2.7.1.181, 2.7.11.1 H Protein of unknown function (DUF4012)
PJOPAKIP_00706 1.4e-10 L Transposase
PJOPAKIP_00708 2.6e-56 K LysR substrate binding domain
PJOPAKIP_00709 0.0 uvrA3 L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
PJOPAKIP_00710 5.7e-242 vbsD V MatE
PJOPAKIP_00711 6.5e-125 magIII L endonuclease III
PJOPAKIP_00712 7.5e-110 maa 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PJOPAKIP_00713 1.2e-42 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PJOPAKIP_00714 3.8e-180 S Membrane transport protein
PJOPAKIP_00715 1.1e-101 uidA 3.2.1.31 G Glycosyl hydrolases family 2, TIM barrel domain
PJOPAKIP_00716 1.3e-281 glnA 6.3.1.2 E glutamine synthetase
PJOPAKIP_00717 5.1e-142 S Domain of unknown function (DUF4191)
PJOPAKIP_00718 7.3e-283 lpdA 1.16.1.1, 1.8.1.4 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PJOPAKIP_00719 2.4e-110 S Protein of unknown function (DUF3043)
PJOPAKIP_00720 4.7e-260 argE E Peptidase dimerisation domain
PJOPAKIP_00721 5.5e-96 ykoE S ABC-type cobalt transport system, permease component
PJOPAKIP_00722 4.6e-277 ykoD P ATPases associated with a variety of cellular activities
PJOPAKIP_00723 1.7e-148 cbiQ P Cobalt transport protein
PJOPAKIP_00724 3.8e-162 IV02_28330 2.1.1.185, 2.1.1.34 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PJOPAKIP_00725 2e-202 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PJOPAKIP_00726 0.0 pheT 6.1.1.20 J Phenylalanyl-tRNA synthetase beta
PJOPAKIP_00727 2.6e-94
PJOPAKIP_00728 3.8e-204 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PJOPAKIP_00729 2.6e-214 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PJOPAKIP_00730 5.1e-170 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
PJOPAKIP_00731 1.2e-249 argD 2.6.1.11, 2.6.1.17 E Aminotransferase class-III
PJOPAKIP_00732 8.6e-184 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PJOPAKIP_00733 2e-83 argR K Regulates arginine biosynthesis genes
PJOPAKIP_00734 4.6e-238 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PJOPAKIP_00735 3.6e-282 argH 4.3.2.1 E argininosuccinate lyase
PJOPAKIP_00736 2.1e-28 thiS 2.8.1.10 H ThiS family
PJOPAKIP_00737 2.3e-156 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PJOPAKIP_00738 1e-145 moeB 2.7.7.80 H ThiF family
PJOPAKIP_00739 7.3e-56 M1-798 P Rhodanese Homology Domain
PJOPAKIP_00740 1e-98 6.1.1.14 S Metal dependent phosphohydrolases with conserved 'HD' motif.
PJOPAKIP_00741 1.6e-140 S Putative ABC-transporter type IV
PJOPAKIP_00742 2.8e-254 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PJOPAKIP_00743 2e-144 L Tetratricopeptide repeat
PJOPAKIP_00744 1.4e-195 yutF 3.1.3.41 G Haloacid dehalogenase-like hydrolase
PJOPAKIP_00746 2.1e-140 tlyA 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
PJOPAKIP_00747 4.1e-100
PJOPAKIP_00748 1.5e-118 trkA P TrkA-N domain
PJOPAKIP_00749 1.6e-266 trkB P Cation transport protein
PJOPAKIP_00750 1.8e-187 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PJOPAKIP_00751 0.0 recN L May be involved in recombinational repair of damaged DNA
PJOPAKIP_00752 7.4e-115 S Haloacid dehalogenase-like hydrolase
PJOPAKIP_00753 1.2e-56 K helix_turn_helix gluconate operon transcriptional repressor
PJOPAKIP_00754 9.4e-172 V ATPases associated with a variety of cellular activities
PJOPAKIP_00755 9e-122 S ABC-2 family transporter protein
PJOPAKIP_00756 5.2e-70 S ABC-2 family transporter protein
PJOPAKIP_00757 8.8e-25 pacL2 3.6.3.8 P ATPase, P-type transporting, HAD superfamily, subfamily IC
PJOPAKIP_00758 5.3e-75 K helix_turn_helix gluconate operon transcriptional repressor
PJOPAKIP_00759 8e-205 S Protein of unknown function (DUF1648)
PJOPAKIP_00760 1.4e-281 thrC 4.2.3.1 E Threonine synthase N terminus
PJOPAKIP_00761 4.5e-252 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PJOPAKIP_00762 2e-236 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PJOPAKIP_00763 5e-102
PJOPAKIP_00764 9.9e-138 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PJOPAKIP_00765 4.8e-216 ybbD 3.2.1.52 G Glycosyl hydrolase family 3 N-terminal domain protein
PJOPAKIP_00766 0.0 S Uncharacterised protein family (UPF0182)
PJOPAKIP_00767 4.4e-91 2.3.1.183 M Acetyltransferase (GNAT) domain
PJOPAKIP_00768 9.4e-37 focA P Formate/nitrite transporter
PJOPAKIP_00769 4.6e-49 S RelB antitoxin
PJOPAKIP_00770 9.2e-77 S PIN domain
PJOPAKIP_00771 2.2e-113 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PJOPAKIP_00772 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PJOPAKIP_00773 1.4e-172 1.1.1.65 C Aldo/keto reductase family
PJOPAKIP_00774 1.5e-244 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PJOPAKIP_00775 4.8e-76 divIC D Septum formation initiator
PJOPAKIP_00776 3.7e-102 ppx2 3.6.1.11, 3.6.1.40 S Protein of unknown function (DUF501)
PJOPAKIP_00777 4.9e-182 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
PJOPAKIP_00779 8.3e-94
PJOPAKIP_00780 6.7e-281 sdaA 4.3.1.17 E Serine dehydratase alpha chain
PJOPAKIP_00781 1.4e-74 fkbP 5.2.1.8 G Peptidyl-prolyl cis-trans
PJOPAKIP_00782 5.7e-80 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PJOPAKIP_00783 4.4e-145 yplQ S Haemolysin-III related
PJOPAKIP_00784 3.8e-67 S Beta-lactamase enzyme family
PJOPAKIP_00785 3.9e-131 bla1 3.5.2.6 V Beta-lactamase enzyme family
PJOPAKIP_00786 2.9e-279 pdtaS 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PJOPAKIP_00787 1.9e-46 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
PJOPAKIP_00788 0.0 D FtsK/SpoIIIE family
PJOPAKIP_00789 9.2e-166 K Cell envelope-related transcriptional attenuator domain
PJOPAKIP_00790 4.7e-56 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
PJOPAKIP_00791 0.0 S Glycosyl transferase, family 2
PJOPAKIP_00792 1.1e-268
PJOPAKIP_00793 1.8e-72 MA20_43655 2.7.2.8 S Zincin-like metallopeptidase
PJOPAKIP_00794 2.7e-151 cof 5.2.1.8 T Eukaryotic phosphomannomutase
PJOPAKIP_00795 3.9e-56 ctsW S Phosphoribosyl transferase domain
PJOPAKIP_00796 3.2e-65 KT Peptidase S24-like
PJOPAKIP_00797 1.3e-196 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PJOPAKIP_00798 5e-128 T Response regulator receiver domain protein
PJOPAKIP_00799 0.0 glgB 2.4.1.18 CBM48,GH13 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PJOPAKIP_00800 5.6e-101 carD K CarD-like/TRCF domain
PJOPAKIP_00801 5.7e-89 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 H Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PJOPAKIP_00802 3.1e-137 znuB U ABC 3 transport family
PJOPAKIP_00803 3.1e-164 znuC P ATPases associated with a variety of cellular activities
PJOPAKIP_00804 5.2e-175 P Zinc-uptake complex component A periplasmic
PJOPAKIP_00805 7.8e-160 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PJOPAKIP_00806 2.3e-252 rpsA J Ribosomal protein S1
PJOPAKIP_00807 1.4e-73 coaE 2.7.1.24 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PJOPAKIP_00808 1.4e-73 V ABC transporter
PJOPAKIP_00809 1.8e-143 XK27_10205
PJOPAKIP_00810 2.6e-62 K helix_turn_helix, Lux Regulon
PJOPAKIP_00811 1.8e-53 2.1.1.80, 3.1.1.61 T Histidine kinase
PJOPAKIP_00812 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PJOPAKIP_00813 7e-165 terC P Integral membrane protein, TerC family
PJOPAKIP_00814 7.1e-275 pyk 2.7.1.40 G Pyruvate kinase
PJOPAKIP_00815 1.9e-109 aspA 3.6.1.13 L NUDIX domain
PJOPAKIP_00817 5.3e-123 pdtaR T Response regulator receiver domain protein
PJOPAKIP_00818 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PJOPAKIP_00819 8.8e-178 yqfO 3.5.4.16 L NIF3 (NGG1p interacting factor 3)
PJOPAKIP_00820 7.5e-126 3.6.1.13 L NUDIX domain
PJOPAKIP_00821 0.0 glgX 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
PJOPAKIP_00822 1.1e-27 zntR K bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
PJOPAKIP_00823 9e-89 K Putative zinc ribbon domain
PJOPAKIP_00824 1.3e-122 S GyrI-like small molecule binding domain
PJOPAKIP_00825 5.4e-106 tag 3.2.2.20 L Methyladenine glycosylase
PJOPAKIP_00827 4.1e-199 EGP Major Facilitator Superfamily
PJOPAKIP_00828 1.6e-37 L Transposase
PJOPAKIP_00829 1.3e-13
PJOPAKIP_00830 6.7e-207 ykiI
PJOPAKIP_00831 9.3e-240 aroA 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PJOPAKIP_00832 3.7e-232 ackA 2.7.2.1, 2.7.2.15 H Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PJOPAKIP_00833 0.0 pta 1.1.1.40, 2.3.1.19, 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
PJOPAKIP_00836 3.5e-134 3.1.3.85 G Phosphoglycerate mutase family
PJOPAKIP_00837 3.6e-70 rsfS 2.7.7.18 J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PJOPAKIP_00838 6e-263 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PJOPAKIP_00840 8.2e-179 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PJOPAKIP_00841 0.0 XK27_09800 I Psort location CytoplasmicMembrane, score 9.99
PJOPAKIP_00842 6.5e-34 XK27_07020 S Domain of unknown function (DUF1846)
PJOPAKIP_00843 2.1e-301 guaA 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PJOPAKIP_00844 0.0 xfp 4.1.2.22, 4.1.2.9 G D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
PJOPAKIP_00845 2.8e-87 M Efflux transporter, RND family, MFP subunit
PJOPAKIP_00846 2.4e-128 V ATPases associated with a variety of cellular activities
PJOPAKIP_00847 2.8e-179 macB2 V MacB-like periplasmic core domain
PJOPAKIP_00848 1.2e-160 S Sucrose-6F-phosphate phosphohydrolase
PJOPAKIP_00849 1.9e-170 metQ P NLPA lipoprotein
PJOPAKIP_00850 5.3e-223 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PJOPAKIP_00851 3.3e-113 metI P Binding-protein-dependent transport system inner membrane component
PJOPAKIP_00852 4.4e-227 S Peptidase dimerisation domain
PJOPAKIP_00853 0.0 nadE 6.3.1.5, 6.3.5.1 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
PJOPAKIP_00854 4.4e-38
PJOPAKIP_00855 0.0 pflB 2.3.1.54 C Pyruvate formate lyase-like
PJOPAKIP_00856 4.3e-174 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PJOPAKIP_00857 4.7e-122 S Protein of unknown function (DUF3000)
PJOPAKIP_00858 1.5e-252 rnd 3.1.13.5 J 3'-5' exonuclease
PJOPAKIP_00859 5.3e-235 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PJOPAKIP_00860 1.3e-236 clcA_2 P Voltage gated chloride channel
PJOPAKIP_00861 1.5e-54
PJOPAKIP_00862 3.8e-116 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PJOPAKIP_00863 8.6e-125 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PJOPAKIP_00864 7.3e-237 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PJOPAKIP_00867 9.9e-229 nhaA P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
PJOPAKIP_00868 5.7e-156 fmt2 3.2.2.10 S Belongs to the LOG family
PJOPAKIP_00869 1.9e-113 safC S O-methyltransferase
PJOPAKIP_00870 3.4e-180 sdhB 1.3.5.1, 1.3.5.4 C 4Fe-4S dicluster domain
PJOPAKIP_00871 0.0 sdhA 1.3.5.1, 1.3.5.4 C Succinate dehydrogenase flavoprotein subunit
PJOPAKIP_00872 7e-306 dprA 5.99.1.2 LU DNA recombination-mediator protein A
PJOPAKIP_00873 4e-292 comM O Magnesium chelatase, subunit ChlI C-terminal
PJOPAKIP_00874 1.8e-92 yraN L Belongs to the UPF0102 family
PJOPAKIP_00875 1.5e-163 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
PJOPAKIP_00876 1.7e-251 metY 2.5.1.49 E Aminotransferase class-V
PJOPAKIP_00877 1.2e-147 V ABC transporter, ATP-binding protein
PJOPAKIP_00878 0.0 MV MacB-like periplasmic core domain
PJOPAKIP_00879 4.2e-132 K helix_turn_helix, Lux Regulon
PJOPAKIP_00880 0.0 tcsS2 T Histidine kinase
PJOPAKIP_00881 1.5e-291 pip 3.4.11.5 S alpha/beta hydrolase fold
PJOPAKIP_00882 2.6e-141 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PJOPAKIP_00883 2e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PJOPAKIP_00884 2.5e-215 int L Phage integrase, N-terminal SAM-like domain
PJOPAKIP_00885 1.5e-171 S Type I restriction enzyme R protein N terminus (HSDR_N)
PJOPAKIP_00888 1.9e-18
PJOPAKIP_00890 6.5e-14
PJOPAKIP_00892 3.2e-39 O prohibitin homologues
PJOPAKIP_00896 1.5e-49 ssb1 L Single-stranded DNA-binding protein
PJOPAKIP_00897 4.1e-08
PJOPAKIP_00900 2.3e-32 V HNH endonuclease
PJOPAKIP_00901 2e-64 A 3'-to-5' exoribonuclease specific for small oligoribonucleotides
PJOPAKIP_00904 4.6e-40 S Protein of unknwon function (DUF3310)
PJOPAKIP_00906 1.5e-07
PJOPAKIP_00909 1.1e-08 whiB K Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA
PJOPAKIP_00912 1.5e-19
PJOPAKIP_00914 2.6e-35 L HNH endonuclease
PJOPAKIP_00915 1.4e-07
PJOPAKIP_00916 3.3e-240 S Terminase
PJOPAKIP_00917 4.6e-176 S Phage portal protein, SPP1 Gp6-like
PJOPAKIP_00918 1.2e-89
PJOPAKIP_00919 2.1e-12
PJOPAKIP_00920 1.3e-24
PJOPAKIP_00921 3.9e-146 V Phage capsid family
PJOPAKIP_00923 3e-46 S Phage protein Gp19/Gp15/Gp42
PJOPAKIP_00924 2.9e-30
PJOPAKIP_00925 7.5e-08
PJOPAKIP_00926 3.9e-20
PJOPAKIP_00927 6.9e-59 eae N domain, Protein
PJOPAKIP_00928 9e-29
PJOPAKIP_00929 1.1e-28
PJOPAKIP_00930 1.1e-83 NT phage tail tape measure protein
PJOPAKIP_00931 1.4e-72 S phage tail
PJOPAKIP_00932 5.6e-223 S Prophage endopeptidase tail
PJOPAKIP_00935 1.7e-38
PJOPAKIP_00936 1.4e-130
PJOPAKIP_00937 1.8e-85 L reverse transcriptase
PJOPAKIP_00939 8.8e-16
PJOPAKIP_00940 9.8e-108 M Glycosyl hydrolases family 25
PJOPAKIP_00941 5.7e-29 S Putative phage holin Dp-1
PJOPAKIP_00942 1.2e-21
PJOPAKIP_00943 5.3e-27 L Resolvase, N terminal domain
PJOPAKIP_00946 9.3e-29 L Phage integrase family
PJOPAKIP_00947 2e-233 XK27_00240 K Fic/DOC family
PJOPAKIP_00948 1.1e-60 yccF S Inner membrane component domain
PJOPAKIP_00949 1.6e-57 ksgA 2.1.1.182 J Methyltransferase domain
PJOPAKIP_00950 2.3e-65 S Cupin 2, conserved barrel domain protein
PJOPAKIP_00951 2.9e-51 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
PJOPAKIP_00952 1.1e-37 L RelB antitoxin
PJOPAKIP_00953 5.3e-242 S HipA-like C-terminal domain
PJOPAKIP_00954 3.5e-217 G Transmembrane secretion effector
PJOPAKIP_00955 9.2e-119 K Bacterial regulatory proteins, tetR family
PJOPAKIP_00956 2.2e-11
PJOPAKIP_00957 0.0 cysB 4.2.1.22 EGP Major facilitator Superfamily
PJOPAKIP_00958 1.2e-253 EGP Transmembrane secretion effector
PJOPAKIP_00959 2e-284 KLT Protein tyrosine kinase
PJOPAKIP_00960 1.2e-76 K Psort location Cytoplasmic, score
PJOPAKIP_00961 5.9e-227
PJOPAKIP_00962 9.2e-39
PJOPAKIP_00963 4.8e-197 S Short C-terminal domain
PJOPAKIP_00964 4.2e-73 M Excalibur calcium-binding domain
PJOPAKIP_00965 6.4e-91 S Helix-turn-helix
PJOPAKIP_00966 6e-108 3.1.3.27 E haloacid dehalogenase-like hydrolase
PJOPAKIP_00967 2.7e-162 3.1.3.73 G Phosphoglycerate mutase family
PJOPAKIP_00968 1.7e-232 rutG F Permease family
PJOPAKIP_00970 8.9e-308 deaD 3.6.4.13 JKL helicase superfamily c-terminal domain
PJOPAKIP_00971 2.1e-257 nplT G Alpha amylase, catalytic domain
PJOPAKIP_00972 1.3e-56 pit P Phosphate transporter family
PJOPAKIP_00973 2.1e-114 MA20_27875 P Protein of unknown function DUF47
PJOPAKIP_00974 4.1e-113 K helix_turn_helix, Lux Regulon
PJOPAKIP_00975 5.3e-232 T Histidine kinase
PJOPAKIP_00976 1.8e-10 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
PJOPAKIP_00977 5e-187 V ATPases associated with a variety of cellular activities
PJOPAKIP_00978 8.1e-227 V ABC-2 family transporter protein
PJOPAKIP_00979 3.2e-251 V ABC-2 family transporter protein
PJOPAKIP_00980 3.3e-283 3.6.4.12 K Putative ATP-dependent DNA helicase recG C-terminal
PJOPAKIP_00981 1.7e-102 S PIN domain
PJOPAKIP_00982 1.8e-90 K Helix-turn-helix domain
PJOPAKIP_00983 7.6e-79 E GDSL-like Lipase/Acylhydrolase family
PJOPAKIP_00984 9.5e-196
PJOPAKIP_00985 1.9e-112 3.4.13.21 E Peptidase family S51
PJOPAKIP_00986 6.4e-108 pncA 2.7.11.1, 3.5.1.19 Q Isochorismatase family
PJOPAKIP_00987 1e-66 MA20_22310 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PJOPAKIP_00988 9.3e-167 M pfam nlp p60
PJOPAKIP_00989 6.2e-159 I Serine aminopeptidase, S33
PJOPAKIP_00990 2.5e-37 S Protein of unknown function (DUF2975)
PJOPAKIP_00991 2.4e-30 yozG K Cro/C1-type HTH DNA-binding domain
PJOPAKIP_00992 1.2e-239 pbuX F Permease family
PJOPAKIP_00993 5.9e-103 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PJOPAKIP_00994 0.0 pcrA 3.6.4.12 L DNA helicase
PJOPAKIP_00995 2.4e-63 S Domain of unknown function (DUF4418)
PJOPAKIP_00996 6.3e-216 V FtsX-like permease family
PJOPAKIP_00997 6.2e-137 lolD V ABC transporter
PJOPAKIP_00998 4.5e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PJOPAKIP_00999 1.9e-233 oatA I Psort location CytoplasmicMembrane, score 9.99
PJOPAKIP_01000 5.9e-115 pgm3 G Phosphoglycerate mutase family
PJOPAKIP_01001 5.3e-63 WQ51_05790 S Bacterial protein of unknown function (DUF948)
PJOPAKIP_01002 6.2e-35
PJOPAKIP_01003 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PJOPAKIP_01004 1.8e-78 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PJOPAKIP_01005 1.8e-204 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PJOPAKIP_01006 2.6e-77 3.4.23.43 S Type IV leader peptidase family
PJOPAKIP_01007 2.7e-219 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PJOPAKIP_01008 3.8e-309 aroK 2.7.1.71, 4.2.3.4 H Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PJOPAKIP_01009 2.7e-79 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
PJOPAKIP_01010 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PJOPAKIP_01011 1.1e-291 sufB O FeS assembly protein SufB
PJOPAKIP_01012 4.3e-236 sufD O FeS assembly protein SufD
PJOPAKIP_01013 9.2e-144 sufC O FeS assembly ATPase SufC
PJOPAKIP_01014 2.2e-240 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PJOPAKIP_01015 3.1e-101 iscU C SUF system FeS assembly protein, NifU family
PJOPAKIP_01016 1.6e-111 yitW S Iron-sulfur cluster assembly protein
PJOPAKIP_01017 1.4e-242 glgC 2.7.7.27 H Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PJOPAKIP_01018 3.1e-164 spoU 2.1.1.185 J SpoU rRNA Methylase family
PJOPAKIP_01020 1.3e-145 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PJOPAKIP_01021 5.7e-58 hinT 2.1.1.226, 2.1.1.227 FG Scavenger mRNA decapping enzyme C-term binding
PJOPAKIP_01022 7.4e-214 phoH T PhoH-like protein
PJOPAKIP_01023 1.4e-101 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PJOPAKIP_01024 1.4e-254 corC S CBS domain
PJOPAKIP_01025 2.3e-182 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PJOPAKIP_01026 0.0 fadD 6.2.1.3 I AMP-binding enzyme
PJOPAKIP_01027 1.1e-201 pntA 1.6.1.2 C NAD(P) transhydrogenase subunit alpha part 1 K00324
PJOPAKIP_01028 2.7e-43 pntAA 1.6.1.2 C 4TM region of pyridine nucleotide transhydrogenase, mitoch
PJOPAKIP_01029 1.9e-235 pntB 1.6.1.2 C The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
PJOPAKIP_01030 1.9e-167 S alpha beta
PJOPAKIP_01031 1.2e-82 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PJOPAKIP_01032 4.3e-227 ilvE 2.6.1.42 E Amino-transferase class IV
PJOPAKIP_01033 2.8e-07 mazG 3.6.1.66 S Psort location Cytoplasmic, score 8.87
PJOPAKIP_01034 7.9e-143 S UPF0126 domain
PJOPAKIP_01035 2.2e-33 rpsT J Binds directly to 16S ribosomal RNA
PJOPAKIP_01036 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PJOPAKIP_01037 5.2e-270 hemN H Involved in the biosynthesis of porphyrin-containing compound
PJOPAKIP_01038 3.8e-196 K helix_turn _helix lactose operon repressor
PJOPAKIP_01039 1.2e-145 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PJOPAKIP_01040 1.3e-43 tnp3510a L Transposase
PJOPAKIP_01041 7.9e-08 mepA V MatE
PJOPAKIP_01043 2.1e-112 K Psort location Cytoplasmic, score
PJOPAKIP_01044 4.9e-193 K helix_turn _helix lactose operon repressor
PJOPAKIP_01045 6.8e-19 EGP Major facilitator Superfamily
PJOPAKIP_01046 1.4e-10 EGP Major facilitator Superfamily
PJOPAKIP_01047 1.3e-09 EGP Major facilitator Superfamily
PJOPAKIP_01048 5.5e-34
PJOPAKIP_01049 1.6e-196 dapB 1.4.1.12, 1.4.1.16, 1.4.1.26 S Dihydrodipicolinate reductase, N-terminus
PJOPAKIP_01050 5e-46 K purine nucleotide biosynthetic process
PJOPAKIP_01051 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase NADPH large subunit
PJOPAKIP_01052 1.6e-304 gltD 1.4.1.13, 1.4.1.14 C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
PJOPAKIP_01054 7.3e-169 E ABC transporter, substrate-binding protein, family 5
PJOPAKIP_01055 0.0 S Glycosyl hydrolases related to GH101 family, GH129
PJOPAKIP_01056 3.3e-75
PJOPAKIP_01057 9e-242 glgA 2.4.1.342 GT4 G Starch synthase catalytic domain
PJOPAKIP_01058 3.8e-159 modF 3.6.3.21, 3.6.3.34 P ATPases associated with a variety of cellular activities
PJOPAKIP_01059 1.1e-158 S Sucrose-6F-phosphate phosphohydrolase
PJOPAKIP_01061 3.7e-91 bcp 1.11.1.15 O Redoxin
PJOPAKIP_01062 4.4e-128
PJOPAKIP_01064 6.5e-110 2.5.1.19 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PJOPAKIP_01065 2.3e-31 mazG S MazG-like family
PJOPAKIP_01066 1.5e-187 L Transposase and inactivated derivatives IS30 family
PJOPAKIP_01067 1.8e-13 2.1.1.72, 3.1.21.3, 3.1.21.4 L N-6 DNA methylase
PJOPAKIP_01068 3.8e-28
PJOPAKIP_01070 4.1e-11
PJOPAKIP_01072 4.3e-20 S Domain of unknown function DUF1828
PJOPAKIP_01073 1.7e-32 rarD S EamA-like transporter family
PJOPAKIP_01074 2.3e-124 S Plasmid pRiA4b ORF-3-like protein
PJOPAKIP_01075 3.7e-178 CP_1020 S zinc ion binding
PJOPAKIP_01077 6.8e-170 I alpha/beta hydrolase fold
PJOPAKIP_01078 7.6e-12 ydhF S Aldo/keto reductase family
PJOPAKIP_01079 3.3e-23 ydhF S Aldo/keto reductase family
PJOPAKIP_01080 3e-88 S phosphoesterase or phosphohydrolase
PJOPAKIP_01081 7.9e-12 S phosphoesterase or phosphohydrolase
PJOPAKIP_01083 4.5e-96 S Phospholipase/Carboxylesterase
PJOPAKIP_01084 7e-195 trmI 2.1.1.219, 2.1.1.220 J Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
PJOPAKIP_01085 2.2e-99 sixA 3.6.1.55 T Phosphoglycerate mutase family
PJOPAKIP_01086 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PJOPAKIP_01087 8.2e-162 metF 1.5.1.20 E Methylenetetrahydrofolate reductase
PJOPAKIP_01088 2.2e-187 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
PJOPAKIP_01089 0.0 glnE 2.7.7.42, 2.7.7.89 H Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell
PJOPAKIP_01090 1.1e-178 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PJOPAKIP_01091 4.6e-73 pyrI 2.1.3.2 F Aspartate carbamoyltransferase regulatory chain, allosteric domain protein
PJOPAKIP_01092 2.6e-288 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PJOPAKIP_01093 8.5e-176 pyrF 2.4.2.10, 4.1.1.23 F Belongs to the OMP decarboxylase family. Type 2 subfamily
PJOPAKIP_01094 6.9e-158 pyrK 1.18.1.2, 1.19.1.1, 1.4.1.13, 1.4.1.14 C Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
PJOPAKIP_01095 4.7e-182 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PJOPAKIP_01096 3.6e-123 pyrE 2.4.2.10 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PJOPAKIP_01097 9e-29
PJOPAKIP_01098 2.1e-213 MA20_36090 S Psort location Cytoplasmic, score 8.87
PJOPAKIP_01099 3.6e-171 cpsY K Bacterial regulatory helix-turn-helix protein, lysR family
PJOPAKIP_01100 4.7e-17 V ABC transporter transmembrane region
PJOPAKIP_01101 4.4e-120 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PJOPAKIP_01102 0.0 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PJOPAKIP_01103 6.3e-229 yhdR 2.6.1.1 E Psort location Cytoplasmic, score 8.87
PJOPAKIP_01104 1.3e-140 KL DEAD-like helicases superfamily
PJOPAKIP_01105 1.6e-61 yeaO K Protein of unknown function, DUF488
PJOPAKIP_01106 1.1e-07 IQ short chain dehydrogenase
PJOPAKIP_01107 9.6e-30 S Virulence protein RhuM family
PJOPAKIP_01108 3.4e-31 S COGs COG3943 Virulence protein
PJOPAKIP_01109 5.7e-43
PJOPAKIP_01110 1.9e-165 3.6.4.12
PJOPAKIP_01111 4e-17
PJOPAKIP_01112 1.2e-76
PJOPAKIP_01113 7.7e-120 lepB 3.4.21.89 U Belongs to the peptidase S26 family
PJOPAKIP_01114 5.9e-87 E amino acid
PJOPAKIP_01115 3.8e-266 mmuP E amino acid
PJOPAKIP_01116 1.9e-30 G Transporter major facilitator family protein
PJOPAKIP_01117 3.6e-79 3.5.1.53 S Carbon-nitrogen hydrolase
PJOPAKIP_01118 3.1e-105
PJOPAKIP_01121 1.5e-120
PJOPAKIP_01122 3.3e-50
PJOPAKIP_01123 9.5e-100 S Acetyltransferase (GNAT) domain
PJOPAKIP_01124 7.5e-49 cefD 5.1.1.17 E Aminotransferase, class V
PJOPAKIP_01125 7.6e-191 V VanZ like family
PJOPAKIP_01126 3.8e-87 EGP Major facilitator Superfamily
PJOPAKIP_01127 8.2e-260 mmuP E amino acid
PJOPAKIP_01128 1.5e-155 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PJOPAKIP_01129 1.5e-126 S SOS response associated peptidase (SRAP)
PJOPAKIP_01130 0.0 trpB 4.1.1.48, 4.2.1.20 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PJOPAKIP_01131 1.2e-160 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PJOPAKIP_01132 6.9e-186 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PJOPAKIP_01133 2.4e-100 rpe 5.1.3.1 G Ribulose-phosphate 3-epimerase
PJOPAKIP_01134 9.9e-42 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E Phosphoribosyl-ATP pyrophosphohydrolase
PJOPAKIP_01135 2.1e-157 hisG 2.4.2.17 F ATP phosphoribosyltransferase
PJOPAKIP_01136 2.3e-105 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PJOPAKIP_01137 6.8e-128 S Bacterial protein of unknown function (DUF881)
PJOPAKIP_01138 1.2e-28 sbp S Protein of unknown function (DUF1290)
PJOPAKIP_01139 6.5e-140 S Bacterial protein of unknown function (DUF881)
PJOPAKIP_01140 5.1e-75 garA T Inner membrane component of T3SS, cytoplasmic domain
PJOPAKIP_01141 5.8e-112 K helix_turn_helix, mercury resistance
PJOPAKIP_01142 8.9e-66
PJOPAKIP_01143 1.4e-39
PJOPAKIP_01144 1.3e-139 pgp 3.1.3.18 S HAD-hyrolase-like
PJOPAKIP_01145 1.1e-61 rbpA K Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters
PJOPAKIP_01146 0.0 helY L DEAD DEAH box helicase
PJOPAKIP_01147 2.4e-50
PJOPAKIP_01148 0.0 pafB K WYL domain
PJOPAKIP_01149 4.4e-299 ugpA 2.7.7.9 G UTP-glucose-1-phosphate uridylyltransferase
PJOPAKIP_01151 0.0 der 1.1.1.399, 1.1.1.95, 2.7.4.25 F GTPase that plays an essential role in the late steps of ribosome biogenesis
PJOPAKIP_01152 9.1e-144 rluB 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PJOPAKIP_01153 2.3e-160 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
PJOPAKIP_01154 2e-30
PJOPAKIP_01155 0.0 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PJOPAKIP_01156 7.6e-242
PJOPAKIP_01157 4.5e-166 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PJOPAKIP_01158 5.3e-223 sucC 6.2.1.5 F Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PJOPAKIP_01159 2.7e-100 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PJOPAKIP_01160 1.2e-52 yajC U Preprotein translocase subunit
PJOPAKIP_01161 3.6e-199 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PJOPAKIP_01162 3.2e-107 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PJOPAKIP_01163 2.1e-100 ruvC 3.1.22.4 L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
PJOPAKIP_01164 4.7e-129 yebC K transcriptional regulatory protein
PJOPAKIP_01165 2.4e-112 hit 2.7.7.53 FG HIT domain
PJOPAKIP_01166 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PJOPAKIP_01172 1.8e-161 S PAC2 family
PJOPAKIP_01173 4.4e-158 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PJOPAKIP_01174 1e-158 G Fructosamine kinase
PJOPAKIP_01175 2e-211 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PJOPAKIP_01176 2.9e-183 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PJOPAKIP_01177 0.0 tkt 2.2.1.1 H Belongs to the transketolase family
PJOPAKIP_01178 3.6e-202 tal 2.2.1.2 H Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PJOPAKIP_01179 3.3e-242 brnQ U Component of the transport system for branched-chain amino acids
PJOPAKIP_01180 5.2e-59 mepA_6 V MatE
PJOPAKIP_01181 1.3e-49 mepA_6 V MatE
PJOPAKIP_01182 3.2e-257 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase, class I II
PJOPAKIP_01183 7.4e-163 S Sucrose-6F-phosphate phosphohydrolase
PJOPAKIP_01184 2.6e-177 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
PJOPAKIP_01185 2.5e-34 secG U Preprotein translocase SecG subunit
PJOPAKIP_01186 1e-145 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PJOPAKIP_01187 1.3e-221 pgk 2.7.2.3, 5.3.1.1 F Phosphoglycerate kinase
PJOPAKIP_01188 1.2e-169 whiA K May be required for sporulation
PJOPAKIP_01189 1.4e-184 rapZ S Displays ATPase and GTPase activities
PJOPAKIP_01190 5.2e-189 aroE 1.1.1.25 E Shikimate dehydrogenase substrate binding domain
PJOPAKIP_01191 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PJOPAKIP_01192 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PJOPAKIP_01193 1e-28 S Psort location Cytoplasmic, score 8.87
PJOPAKIP_01194 0.0 S Psort location Cytoplasmic, score 8.87
PJOPAKIP_01195 2.5e-113 S Domain of unknown function (DUF4194)
PJOPAKIP_01196 3.7e-296 S Psort location Cytoplasmic, score 8.87
PJOPAKIP_01197 2.7e-166 V MacB-like periplasmic core domain
PJOPAKIP_01198 6.2e-137 macB V ATPases associated with a variety of cellular activities
PJOPAKIP_01199 5.2e-148 M Putative peptidoglycan binding domain
PJOPAKIP_01200 3.5e-146
PJOPAKIP_01201 3.3e-116 K Transcriptional regulatory protein, C terminal
PJOPAKIP_01202 7.7e-123 qseC 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PJOPAKIP_01203 7.3e-13 XK27_08585 S Hypothetical bacterial integral membrane protein (Trep_Strep)
PJOPAKIP_01204 1.8e-37 G ATPases associated with a variety of cellular activities
PJOPAKIP_01205 6.9e-32 S Zincin-like metallopeptidase
PJOPAKIP_01206 4.5e-160 2.1.1.72 S Protein conserved in bacteria
PJOPAKIP_01207 2.6e-129 yueD S Enoyl-(Acyl carrier protein) reductase
PJOPAKIP_01208 1.9e-300 ybiT S ABC transporter
PJOPAKIP_01209 1.2e-118 S Protein of unknown function (DUF969)
PJOPAKIP_01210 1.5e-164 S Protein of unknown function (DUF979)
PJOPAKIP_01211 7.2e-118 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PJOPAKIP_01212 1.7e-298 trpE 4.1.3.27 E Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PJOPAKIP_01213 2e-70 hisI 3.5.4.19, 3.6.1.31 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
PJOPAKIP_01214 6.1e-140 hisF 4.1.3.27 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PJOPAKIP_01215 3e-223 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PJOPAKIP_01216 7e-173 cdsA 2.7.7.41, 2.7.7.67 I Cytidylyltransferase family
PJOPAKIP_01217 4e-93 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PJOPAKIP_01218 1.3e-134 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PJOPAKIP_01219 3.6e-141 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PJOPAKIP_01220 1.9e-142 rpsB J Belongs to the universal ribosomal protein uS2 family
PJOPAKIP_01221 1.3e-87 def 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PJOPAKIP_01222 0.0 fadD3 6.2.1.3 I long-chain-fatty acid CoA ligase
PJOPAKIP_01223 7.2e-70
PJOPAKIP_01224 2.8e-210 guaB 1.1.1.205 F IMP dehydrogenase family protein
PJOPAKIP_01225 4.6e-243 icd 1.1.1.42 C Belongs to the isocitrate and isopropylmalate dehydrogenases family
PJOPAKIP_01226 2.3e-258 G ABC transporter substrate-binding protein
PJOPAKIP_01227 4.1e-103 M Peptidase family M23
PJOPAKIP_01231 1.1e-195 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PJOPAKIP_01232 1.6e-97 rimI 2.3.1.128, 2.3.1.234 K FR47-like protein
PJOPAKIP_01233 3.6e-151 yeaZ 2.3.1.234 O Glycoprotease family
PJOPAKIP_01234 4.8e-102 ydiB 2.7.1.221, 5.1.1.1 S Threonylcarbamoyl adenosine biosynthesis protein TsaE
PJOPAKIP_01235 6.6e-176 holA 2.7.7.7 L DNA polymerase III delta subunit
PJOPAKIP_01236 3.9e-251 comE S Competence protein
PJOPAKIP_01237 7e-58 comEA 2.4.1.21 GT5 L Helix-hairpin-helix motif
PJOPAKIP_01238 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PJOPAKIP_01239 5.4e-151 ET Bacterial periplasmic substrate-binding proteins
PJOPAKIP_01240 6.3e-171 corA P CorA-like Mg2+ transporter protein
PJOPAKIP_01241 2.3e-164 3.1.3.85, 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
PJOPAKIP_01242 2.1e-254 L ribosomal rna small subunit methyltransferase
PJOPAKIP_01243 4.1e-71 pdxH S Pfam:Pyridox_oxidase
PJOPAKIP_01244 2.4e-170 EG EamA-like transporter family
PJOPAKIP_01245 2.5e-88
PJOPAKIP_01246 1.2e-157 L Transposase, Mutator family
PJOPAKIP_01247 1.9e-42 yxaM EGP Major Facilitator Superfamily
PJOPAKIP_01249 1.9e-07 L Transposase, Mutator family
PJOPAKIP_01250 3e-18 L Transposase and inactivated derivatives IS30 family
PJOPAKIP_01251 3.7e-97 L Transposase and inactivated derivatives IS30 family
PJOPAKIP_01252 5.9e-185 V Abi-like protein
PJOPAKIP_01253 4.7e-63 L PFAM Integrase catalytic
PJOPAKIP_01254 9.9e-60 L PFAM Integrase catalytic
PJOPAKIP_01255 7.7e-35 D Filamentation induced by cAMP protein fic
PJOPAKIP_01256 3.9e-240 EGP Major facilitator Superfamily
PJOPAKIP_01258 1e-101 ppiA 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PJOPAKIP_01259 0.0 relA 2.7.6.5, 3.1.7.2 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PJOPAKIP_01260 1.9e-83 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
PJOPAKIP_01261 1.9e-46 S Domain of unknown function (DUF4193)
PJOPAKIP_01262 3.6e-178 S Protein of unknown function (DUF3071)
PJOPAKIP_01263 1.9e-236 S Type I phosphodiesterase / nucleotide pyrophosphatase
PJOPAKIP_01264 0.0 gyrA 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
PJOPAKIP_01265 9.3e-136 KT RESPONSE REGULATOR receiver
PJOPAKIP_01266 0.0 lhr L DEAD DEAH box helicase
PJOPAKIP_01267 3.1e-173 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PJOPAKIP_01268 1.3e-200 G Major Facilitator Superfamily
PJOPAKIP_01269 0.0 gyrB2 5.99.1.3 L DNA topoisomerase (ATP-hydrolyzing)
PJOPAKIP_01270 1.5e-189 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PJOPAKIP_01271 7.6e-123
PJOPAKIP_01272 4.3e-192 crtE 2.5.1.1, 2.5.1.10, 2.5.1.29 H Belongs to the FPP GGPP synthase family
PJOPAKIP_01273 0.0 pknL 2.7.11.1 KLT PASTA
PJOPAKIP_01274 2.2e-128 plsC2 2.3.1.51 I Phosphate acyltransferases
PJOPAKIP_01275 7.3e-100
PJOPAKIP_01276 1e-190 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PJOPAKIP_01277 3.7e-16 L Transposase
PJOPAKIP_01278 6.1e-63 L Transposase
PJOPAKIP_01279 2e-12 L Transposase
PJOPAKIP_01280 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PJOPAKIP_01281 2.4e-116 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PJOPAKIP_01282 5.7e-10
PJOPAKIP_01283 2.7e-103 recX S Modulates RecA activity
PJOPAKIP_01284 2.6e-198 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PJOPAKIP_01285 2.2e-37 S Protein of unknown function (DUF3046)
PJOPAKIP_01286 7.8e-83 K Helix-turn-helix XRE-family like proteins
PJOPAKIP_01287 1.8e-90 cinA 3.5.1.42 S Belongs to the CinA family
PJOPAKIP_01288 3.5e-120 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PJOPAKIP_01289 0.0 ftsK D FtsK SpoIIIE family protein
PJOPAKIP_01290 3.5e-137 fic D Fic/DOC family
PJOPAKIP_01291 1.6e-185 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PJOPAKIP_01292 4.8e-279 miaB 2.8.4.3 H Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PJOPAKIP_01293 5.1e-136 relA2 2.7.6.5 S Region found in RelA / SpoT proteins
PJOPAKIP_01294 8.2e-177 ydeD EG EamA-like transporter family
PJOPAKIP_01295 6.9e-127 ybhL S Belongs to the BI1 family
PJOPAKIP_01296 9.3e-118 E Psort location Cytoplasmic, score 8.87
PJOPAKIP_01297 0.0 S Protein of unknown function DUF262
PJOPAKIP_01298 2.3e-84 S PIN domain
PJOPAKIP_01299 1.4e-57 relB L RelB antitoxin
PJOPAKIP_01300 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PJOPAKIP_01301 0.0 ctpE P E1-E2 ATPase
PJOPAKIP_01302 5.4e-103
PJOPAKIP_01303 4.8e-243 trmA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PJOPAKIP_01304 1.6e-129 S Protein of unknown function (DUF3159)
PJOPAKIP_01305 3.4e-131 S Protein of unknown function (DUF3710)
PJOPAKIP_01306 3.7e-170 exoA 3.1.11.2 L Endonuclease/Exonuclease/phosphatase family
PJOPAKIP_01307 0.0 dppD EP Oligopeptide/dipeptide transporter, C-terminal region
PJOPAKIP_01308 7.9e-172 dppC EP N-terminal TM domain of oligopeptide transport permease C
PJOPAKIP_01309 4.4e-153 dppB EP Binding-protein-dependent transport system inner membrane component
PJOPAKIP_01310 2.3e-311 E ABC transporter, substrate-binding protein, family 5
PJOPAKIP_01311 1.2e-183 xerC D Belongs to the 'phage' integrase family. XerC subfamily
PJOPAKIP_01312 2e-42
PJOPAKIP_01313 1.5e-192 tyrA 1.3.1.12, 1.3.1.43 E Prephenate dehydrogenase
PJOPAKIP_01314 1.5e-191 pheA 1.3.1.12, 4.2.1.51, 5.4.99.5 E Prephenate dehydratase
PJOPAKIP_01315 6e-75
PJOPAKIP_01316 0.0 typA T Elongation factor G C-terminus
PJOPAKIP_01317 7e-107 K Virulence activator alpha C-term
PJOPAKIP_01318 4.8e-137 V ATPases associated with a variety of cellular activities
PJOPAKIP_01319 0.0 V FtsX-like permease family
PJOPAKIP_01320 4.5e-247 naiP U Sugar (and other) transporter
PJOPAKIP_01321 1.2e-222 iscS1 2.8.1.7 E Aminotransferase class-V
PJOPAKIP_01322 2.3e-162 nadC 1.4.3.16, 2.4.2.19 H Quinolinate phosphoribosyl transferase, N-terminal domain
PJOPAKIP_01323 2.1e-307 nadB 1.3.5.4, 1.4.3.16, 2.4.2.19 H Catalyzes the oxidation of L-aspartate to iminoaspartate
PJOPAKIP_01324 2.7e-249 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PJOPAKIP_01325 5.5e-155 nrtR 3.6.1.55 F NUDIX hydrolase
PJOPAKIP_01326 1.4e-117 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PJOPAKIP_01327 2.1e-155 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PJOPAKIP_01328 7.6e-150 soj D CobQ CobB MinD ParA nucleotide binding domain protein
PJOPAKIP_01329 0.0 macB_2 V ATPases associated with a variety of cellular activities
PJOPAKIP_01330 2.8e-168 xerD D recombinase XerD
PJOPAKIP_01331 1.3e-61 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PJOPAKIP_01332 4.3e-26 rpmI J Ribosomal protein L35
PJOPAKIP_01333 2e-80 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PJOPAKIP_01334 6.8e-133 2.7.6.2 H Thiamin pyrophosphokinase, vitamin B1 binding domain
PJOPAKIP_01335 1.3e-196 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PJOPAKIP_01336 1.5e-89 ybaK J Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PJOPAKIP_01337 9.5e-178 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PJOPAKIP_01338 1.4e-189 galM 5.1.3.3 G Aldose 1-epimerase
PJOPAKIP_01339 7.6e-185 galM 5.1.3.3 G Aldose 1-epimerase
PJOPAKIP_01340 1.6e-54
PJOPAKIP_01341 1.2e-132 sigH K Belongs to the sigma-70 factor family. ECF subfamily
PJOPAKIP_01342 3e-295 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PJOPAKIP_01343 3.7e-190 V Acetyltransferase (GNAT) domain
PJOPAKIP_01344 0.0 smc D Required for chromosome condensation and partitioning
PJOPAKIP_01345 1.1e-287 folC 6.3.2.12, 6.3.2.17 H Mur ligase middle domain
PJOPAKIP_01346 1.4e-165 K Psort location Cytoplasmic, score
PJOPAKIP_01347 0.0 pepP 3.4.11.9 E Aminopeptidase P, N-terminal domain
PJOPAKIP_01348 1.9e-97 3.6.1.55 F NUDIX domain
PJOPAKIP_01349 0.0 P Belongs to the ABC transporter superfamily
PJOPAKIP_01350 3.4e-195 dppC EP Binding-protein-dependent transport system inner membrane component
PJOPAKIP_01351 2e-189 dppB EP Binding-protein-dependent transport system inner membrane component
PJOPAKIP_01352 3.3e-305 ddpA E Bacterial extracellular solute-binding proteins, family 5 Middle
PJOPAKIP_01353 2.9e-249 nagA 3.5.1.25 G Amidohydrolase family
PJOPAKIP_01354 8.1e-151 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PJOPAKIP_01355 1.2e-205 GK ROK family
PJOPAKIP_01356 3.2e-164 2.7.1.2 GK ROK family
PJOPAKIP_01357 7.2e-220 GK ROK family
PJOPAKIP_01358 5.6e-169 2.7.1.4 G pfkB family carbohydrate kinase
PJOPAKIP_01359 2.3e-256 S Metal-independent alpha-mannosidase (GH125)
PJOPAKIP_01360 5.7e-249 yihS 5.1.3.11 G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
PJOPAKIP_01361 2e-136 K helix_turn _helix lactose operon repressor
PJOPAKIP_01362 1.1e-196 G Belongs to the glycosyl hydrolase 5 (cellulase A) family
PJOPAKIP_01363 4.5e-125 lacG G Binding-protein-dependent transport system inner membrane component
PJOPAKIP_01364 6e-124 G Binding-protein-dependent transport system inner membrane component
PJOPAKIP_01365 3.5e-177 srrA1 G Bacterial extracellular solute-binding protein
PJOPAKIP_01366 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
PJOPAKIP_01367 0.0 3.2.1.24 GH38 G Alpha mannosidase, middle domain
PJOPAKIP_01368 4.9e-87 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PJOPAKIP_01369 4.1e-15
PJOPAKIP_01370 2.8e-183 ftsQ 6.3.2.4 D Cell division protein FtsQ
PJOPAKIP_01371 3.3e-286 murC 6.3.2.8 M Belongs to the MurCDEF family
PJOPAKIP_01372 5.7e-222 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PJOPAKIP_01373 1.8e-226 ftsW 2.4.1.227 GT28 D Belongs to the SEDS family
PJOPAKIP_01374 7.9e-274 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PJOPAKIP_01375 7.7e-205 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PJOPAKIP_01376 1.5e-248 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PJOPAKIP_01377 1.9e-153 yqeC 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PJOPAKIP_01378 0.0 ftsI 3.4.16.4 M Penicillin-binding protein, transpeptidase domain protein
PJOPAKIP_01379 3.7e-73 ftsL D Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
PJOPAKIP_01380 3.1e-198 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PJOPAKIP_01381 1.9e-92 mraZ K Belongs to the MraZ family
PJOPAKIP_01382 0.0 L DNA helicase
PJOPAKIP_01383 1.9e-228 serA 1.1.1.399, 1.1.1.95 EH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
PJOPAKIP_01384 5.3e-78 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PJOPAKIP_01385 1.9e-56 M Lysin motif
PJOPAKIP_01386 3.1e-130 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PJOPAKIP_01387 2.1e-163 czcD P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PJOPAKIP_01388 3.5e-177 ldh 1.1.1.27, 1.1.1.37 C Belongs to the LDH MDH superfamily. LDH family
PJOPAKIP_01389 2.8e-274 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PJOPAKIP_01390 5.8e-123 rsmC 2.1.1.172 J Ribosomal protein L11 methyltransferase (PrmA)
PJOPAKIP_01391 0.0 hrpA 3.6.4.13 L Helicase associated domain (HA2) Add an annotation
PJOPAKIP_01392 9.2e-173 M Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses
PJOPAKIP_01393 1.1e-308 P Belongs to the ABC transporter superfamily
PJOPAKIP_01394 0.0 E Bacterial extracellular solute-binding proteins, family 5 Middle
PJOPAKIP_01395 1.6e-177 EP Binding-protein-dependent transport system inner membrane component
PJOPAKIP_01396 6.2e-131 appC EP Binding-protein-dependent transport system inner membrane component
PJOPAKIP_01397 1.1e-217 EGP Major facilitator Superfamily
PJOPAKIP_01398 5.6e-266 glnA2 6.3.1.2 E glutamine synthetase
PJOPAKIP_01399 1.1e-130 S Uncharacterized protein conserved in bacteria (DUF2252)
PJOPAKIP_01400 1.8e-130 hisA 5.3.1.16, 5.3.1.24 E Histidine biosynthesis protein
PJOPAKIP_01401 5.3e-121 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PJOPAKIP_01402 1.8e-99
PJOPAKIP_01403 1e-110 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E Imidazoleglycerol-phosphate dehydratase
PJOPAKIP_01404 9.6e-222 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PJOPAKIP_01405 3.3e-253 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PJOPAKIP_01406 1.4e-41 acyP 3.6.1.7 C Acylphosphatase
PJOPAKIP_01407 2.3e-169 2.7.1.17 GH19 G FGGY family of carbohydrate kinases, N-terminal domain
PJOPAKIP_01408 1.4e-155 yvgN 1.1.1.346 S Aldo/keto reductase family
PJOPAKIP_01409 4.6e-67 G Bacterial extracellular solute-binding protein
PJOPAKIP_01410 1e-153 K Bacterial transcriptional regulator
PJOPAKIP_01411 6.4e-134 hmgR K Sugar-specific transcriptional regulator TrmB
PJOPAKIP_01412 1.2e-139 QT PucR C-terminal helix-turn-helix domain
PJOPAKIP_01413 0.0
PJOPAKIP_01414 1.4e-156 birA 2.7.1.33, 6.3.4.15 H Biotin/lipoate A/B protein ligase family
PJOPAKIP_01415 4.2e-95 bioY S BioY family
PJOPAKIP_01416 0.0 accA 6.3.4.14, 6.4.1.2, 6.4.1.3 I Carbamoyl-phosphate synthase L chain, ATP binding domain protein
PJOPAKIP_01417 1.4e-292 pccB I Carboxyl transferase domain
PJOPAKIP_01418 0.0 fas 2.3.1.179 I Beta-ketoacyl synthase, C-terminal domain
PJOPAKIP_01419 3.5e-97 acpS 2.7.8.7, 3.2.1.52 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PJOPAKIP_01421 1.7e-109
PJOPAKIP_01422 1.6e-115
PJOPAKIP_01423 1e-41 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PJOPAKIP_01424 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PJOPAKIP_01425 5.5e-248 pbuO S Permease family
PJOPAKIP_01426 5.9e-141 3.2.1.8 S alpha beta
PJOPAKIP_01427 3.1e-87 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PJOPAKIP_01428 1.1e-33 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PJOPAKIP_01429 4.5e-221 T Forkhead associated domain
PJOPAKIP_01430 0.0 L Superfamily I DNA and RNA helicases and helicase subunits
PJOPAKIP_01431 3e-30
PJOPAKIP_01432 6.8e-89 flgA NO SAF
PJOPAKIP_01433 9.5e-31 fmdB S Putative regulatory protein
PJOPAKIP_01434 1.2e-107 fthC 6.3.3.2 H 5-formyltetrahydrofolate cyclo-ligase family
PJOPAKIP_01435 3.7e-125 rimJ 2.3.1.128 J Acetyltransferase (GNAT) domain
PJOPAKIP_01436 4.8e-154
PJOPAKIP_01437 6.7e-47 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PJOPAKIP_01438 3.5e-67 megL 2.5.1.48, 4.4.1.1, 4.4.1.11, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PJOPAKIP_01442 4.1e-25 rpmG J Ribosomal protein L33
PJOPAKIP_01443 3e-218 murB 1.3.1.98 M Cell wall formation
PJOPAKIP_01444 1.4e-268 E aromatic amino acid transport protein AroP K03293
PJOPAKIP_01445 1.7e-59 fdxA C 4Fe-4S binding domain
PJOPAKIP_01446 1.2e-214 dapC E Aminotransferase class I and II
PJOPAKIP_01447 3e-233 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PJOPAKIP_01448 6.9e-162 S EamA-like transporter family
PJOPAKIP_01451 2.8e-249 M Bacterial capsule synthesis protein PGA_cap
PJOPAKIP_01452 1.8e-187 MA20_16500 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PJOPAKIP_01453 7.1e-110 yigZ 2.1.1.45, 3.4.13.9 S Uncharacterized protein family UPF0029
PJOPAKIP_01454 5.9e-105
PJOPAKIP_01455 0.0 malQ 2.4.1.18, 2.4.1.25, 3.2.1.196, 5.4.99.15 CBM48,GH13,GH77 G 4-alpha-glucanotransferase
PJOPAKIP_01456 2e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PJOPAKIP_01457 3.7e-82 rpsI J Belongs to the universal ribosomal protein uS9 family
PJOPAKIP_01458 0.0 glgX 3.2.1.196, 3.2.1.68 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
PJOPAKIP_01459 5.7e-230 2.7.1.2 GK transcriptional repressor of nag (N-acetylglucosamine) operon K02565
PJOPAKIP_01460 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
PJOPAKIP_01461 3.6e-160 ywiC S YwiC-like protein
PJOPAKIP_01462 2e-143 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
PJOPAKIP_01463 8e-51 rpsJ J Involved in the binding of tRNA to the ribosomes
PJOPAKIP_01464 1.1e-115 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PJOPAKIP_01465 1.2e-115 rplD J Forms part of the polypeptide exit tunnel
PJOPAKIP_01466 3.4e-46 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PJOPAKIP_01467 8e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PJOPAKIP_01468 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PJOPAKIP_01469 4.3e-56 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PJOPAKIP_01470 1.6e-98 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PJOPAKIP_01471 1.7e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PJOPAKIP_01472 4.1e-37 rpmC J Belongs to the universal ribosomal protein uL29 family
PJOPAKIP_01473 6.4e-41 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PJOPAKIP_01474 6.6e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PJOPAKIP_01475 1.8e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PJOPAKIP_01476 4.4e-103 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PJOPAKIP_01477 9.2e-18 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PJOPAKIP_01478 7.2e-68 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PJOPAKIP_01479 1.6e-94 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PJOPAKIP_01480 2.1e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PJOPAKIP_01481 1.5e-95 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PJOPAKIP_01482 9.2e-26 rpmD J Ribosomal protein L30p/L7e
PJOPAKIP_01483 1.1e-75 rplO J binds to the 23S rRNA
PJOPAKIP_01484 1.2e-247 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PJOPAKIP_01485 6.5e-99 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PJOPAKIP_01486 1.6e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PJOPAKIP_01487 8.4e-14 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PJOPAKIP_01488 3.6e-61 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PJOPAKIP_01489 1.5e-65 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PJOPAKIP_01490 2e-183 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PJOPAKIP_01491 1.3e-56 rplQ J Ribosomal protein L17
PJOPAKIP_01492 3.1e-167 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PJOPAKIP_01493 0.0 gcs2 S A circularly permuted ATPgrasp
PJOPAKIP_01494 8.8e-150 E Transglutaminase/protease-like homologues
PJOPAKIP_01495 9.5e-218 S Psort location Cytoplasmic, score
PJOPAKIP_01497 4.4e-61 2.7.7.7 L Transposase, Mutator family
PJOPAKIP_01498 1.1e-21 K helix_turn _helix lactose operon repressor
PJOPAKIP_01499 5.2e-125
PJOPAKIP_01500 6.2e-183 nusA K Participates in both transcription termination and antitermination
PJOPAKIP_01501 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PJOPAKIP_01502 8.2e-79 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PJOPAKIP_01503 2.2e-210 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PJOPAKIP_01504 1.3e-215 ribF 2.7.1.26, 2.7.7.2 H riboflavin kinase
PJOPAKIP_01505 8.9e-284 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PJOPAKIP_01506 2.2e-95
PJOPAKIP_01508 5.4e-127 rpiA 2.7.1.12, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
PJOPAKIP_01509 1.5e-136 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PJOPAKIP_01511 2.6e-268 merA 1.16.1.1, 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
PJOPAKIP_01512 1e-72 K Transcriptional regulator
PJOPAKIP_01513 1.2e-202 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
PJOPAKIP_01514 0.0 pgm 5.4.2.2 G Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PJOPAKIP_01515 2.8e-245 EGP Major facilitator Superfamily
PJOPAKIP_01516 0.0 ptsG 2.7.1.211 G pts system, glucose-specific IIABC component
PJOPAKIP_01517 4.1e-153 arbG K CAT RNA binding domain
PJOPAKIP_01518 3.1e-204 I Diacylglycerol kinase catalytic domain
PJOPAKIP_01519 2.7e-241 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PJOPAKIP_01521 2.1e-14
PJOPAKIP_01522 1.8e-248 G Bacterial extracellular solute-binding protein
PJOPAKIP_01523 8.1e-174 G Binding-protein-dependent transport system inner membrane component
PJOPAKIP_01524 7.2e-167 G ABC transporter permease
PJOPAKIP_01525 0.0 gnpA 2.4.1.211 S Lacto-N-biose phosphorylase C-terminal domain
PJOPAKIP_01526 2.6e-205 mdsC 2.7.1.162, 2.7.1.39 S Phosphotransferase enzyme family
PJOPAKIP_01527 1.8e-276 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PJOPAKIP_01528 1.7e-169 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PJOPAKIP_01529 2.7e-110 degU K helix_turn_helix, Lux Regulon
PJOPAKIP_01530 5.6e-228 tcsS3 KT PspC domain
PJOPAKIP_01531 6.4e-172 pspC KT PspC domain
PJOPAKIP_01532 6.4e-56
PJOPAKIP_01533 1.1e-295 S alpha beta
PJOPAKIP_01534 2.3e-113 S Protein of unknown function (DUF4125)
PJOPAKIP_01535 7.5e-278 S Domain of unknown function (DUF4037)
PJOPAKIP_01536 0.0 phoC 3.1.3.5 I PAP2 superfamily
PJOPAKIP_01537 9.8e-206 araJ EGP Major facilitator Superfamily
PJOPAKIP_01539 0.0 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PJOPAKIP_01540 7.3e-175 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
PJOPAKIP_01541 1.4e-138 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
PJOPAKIP_01542 2.4e-116 phoU P Plays a role in the regulation of phosphate uptake
PJOPAKIP_01543 4.4e-198 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PJOPAKIP_01544 4.3e-37
PJOPAKIP_01545 4.5e-216 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PJOPAKIP_01546 1.2e-169 usp 3.5.1.28 CBM50 S CHAP domain
PJOPAKIP_01547 3.6e-77 M NlpC/P60 family
PJOPAKIP_01548 2.6e-103 M NlpC/P60 family
PJOPAKIP_01549 8.6e-190 T Universal stress protein family
PJOPAKIP_01550 1.7e-72 attW O OsmC-like protein
PJOPAKIP_01551 1.1e-172 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PJOPAKIP_01552 3.4e-123 folA 1.5.1.3 H dihydrofolate reductase
PJOPAKIP_01553 1.1e-97 ptpA 3.1.3.48 T low molecular weight
PJOPAKIP_01554 6e-52 azlD E Branched-chain amino acid transport protein (AzlD)
PJOPAKIP_01555 3e-142 azlC E AzlC protein
PJOPAKIP_01556 1.9e-64 ohr O OsmC-like protein
PJOPAKIP_01557 1.1e-234 L Phage integrase family
PJOPAKIP_01558 1.1e-78
PJOPAKIP_01559 6.2e-126
PJOPAKIP_01560 3.6e-20 S Protein of unknown function (DUF2599)
PJOPAKIP_01562 2.7e-241 L Phage integrase family
PJOPAKIP_01563 8.3e-76 G Glycosyl hydrolase family 20, domain 2
PJOPAKIP_01564 7.3e-35 ptrB 3.4.21.83 E Protease II
PJOPAKIP_01566 1.5e-97 KLT Protein kinase domain
PJOPAKIP_01567 1.9e-74 K Bacterial regulatory proteins, luxR family
PJOPAKIP_01568 1.4e-51 T Histidine kinase
PJOPAKIP_01569 1.6e-77 V FtsX-like permease family
PJOPAKIP_01570 3.3e-79 V ABC transporter
PJOPAKIP_01571 5.2e-29 V ABC transporter transmembrane region
PJOPAKIP_01572 1.1e-65
PJOPAKIP_01573 1.1e-169 yfiL V ATPases associated with a variety of cellular activities
PJOPAKIP_01574 1.7e-137
PJOPAKIP_01575 2.1e-106
PJOPAKIP_01576 3.2e-22 S Psort location CytoplasmicMembrane, score
PJOPAKIP_01577 5.3e-96 rpoE4 K Sigma-70 region 2
PJOPAKIP_01578 1.2e-116 V VanZ like family
PJOPAKIP_01579 4.9e-117 K Bacterial regulatory proteins, luxR family
PJOPAKIP_01580 1.4e-194 T Histidine kinase
PJOPAKIP_01581 5.2e-41
PJOPAKIP_01582 6.1e-67
PJOPAKIP_01583 1.8e-222 V Efflux ABC transporter, permease protein
PJOPAKIP_01584 7.7e-138 V ABC transporter
PJOPAKIP_01585 8.1e-94 E Asparagine synthase
PJOPAKIP_01586 1.4e-17
PJOPAKIP_01587 7.3e-121 V ABC transporter
PJOPAKIP_01588 1.1e-122 K helix_turn_helix, Lux Regulon
PJOPAKIP_01589 1.7e-230 T Histidine kinase
PJOPAKIP_01590 1.3e-25 U Type IV secretory system Conjugative DNA transfer
PJOPAKIP_01593 8.3e-123 V ABC transporter
PJOPAKIP_01595 3e-59
PJOPAKIP_01596 1.7e-92
PJOPAKIP_01597 1.3e-75
PJOPAKIP_01598 8.5e-205 isp2 3.2.1.96 M CHAP domain
PJOPAKIP_01599 0.0 trsE U type IV secretory pathway VirB4
PJOPAKIP_01600 8.6e-63 S PrgI family protein
PJOPAKIP_01601 5.5e-142
PJOPAKIP_01602 8.1e-31
PJOPAKIP_01603 3.5e-97 K transcriptional regulator
PJOPAKIP_01604 3.9e-232 qseC 2.7.13.3 T GHKL domain
PJOPAKIP_01605 4.6e-120 K Transcriptional regulatory protein, C terminal
PJOPAKIP_01606 2.9e-48
PJOPAKIP_01607 1.1e-119
PJOPAKIP_01608 2.2e-188 V Putative peptidoglycan binding domain
PJOPAKIP_01609 1e-133 ytrE V ABC transporter
PJOPAKIP_01610 1.6e-194
PJOPAKIP_01611 1.9e-98 lacR K Transcriptional regulator, LacI family
PJOPAKIP_01612 0.0 sprF 4.6.1.1 M Cell surface antigen C-terminus
PJOPAKIP_01614 6.6e-130 K Helix-turn-helix domain protein
PJOPAKIP_01615 5.2e-27
PJOPAKIP_01616 9.2e-71
PJOPAKIP_01617 1.7e-35
PJOPAKIP_01618 2.1e-103 parA D AAA domain
PJOPAKIP_01619 8e-83 S Transcription factor WhiB
PJOPAKIP_01620 7.4e-233 S Helix-turn-helix domain
PJOPAKIP_01621 2.2e-21
PJOPAKIP_01622 7.8e-13
PJOPAKIP_01624 2.1e-165 trmB 2.1.1.297, 2.1.1.33, 2.4.99.12, 2.4.99.13, 2.4.99.14, 2.4.99.15 GT30 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PJOPAKIP_01625 4e-200 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PJOPAKIP_01628 3.1e-261 cma 2.1.1.79 M Mycolic acid cyclopropane synthetase
PJOPAKIP_01629 1.7e-202 fucO 1.1.1.1, 1.1.1.77, 1.1.99.37, 1.2.98.1 C Iron-containing alcohol dehydrogenase
PJOPAKIP_01630 9.8e-177 3.4.14.13 M Glycosyltransferase like family 2
PJOPAKIP_01631 3.5e-270 S AI-2E family transporter
PJOPAKIP_01632 1.7e-232 epsG M Glycosyl transferase family 21
PJOPAKIP_01633 1e-146 natA V ATPases associated with a variety of cellular activities
PJOPAKIP_01634 3.3e-300
PJOPAKIP_01635 5.6e-259 dacB 3.4.16.4 M D-Ala-D-Ala carboxypeptidase 3 (S13) family
PJOPAKIP_01636 1.3e-205 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PJOPAKIP_01637 1.4e-96 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PJOPAKIP_01638 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PJOPAKIP_01640 6.5e-105 folE 2.7.6.3, 3.5.4.16 H GTP cyclohydrolase
PJOPAKIP_01641 1.7e-159 folP 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PJOPAKIP_01642 4e-262 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 3.5.4.39, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PJOPAKIP_01643 1.8e-90 S Protein of unknown function (DUF3180)
PJOPAKIP_01644 3.9e-170 tesB I Thioesterase-like superfamily
PJOPAKIP_01645 0.0 yjjK S ATP-binding cassette protein, ChvD family
PJOPAKIP_01646 2.7e-20 S Protein of unknown function (DUF2975)
PJOPAKIP_01647 2.8e-26 K Cro/C1-type HTH DNA-binding domain
PJOPAKIP_01648 2e-07
PJOPAKIP_01649 3.5e-85 S Protein of unknown function (DUF3990)
PJOPAKIP_01650 1.4e-36 S Protein of unknown function (DUF3791)
PJOPAKIP_01651 9.7e-303 EGP Major Facilitator Superfamily
PJOPAKIP_01653 1.4e-178 glkA 2.7.1.2 G ROK family
PJOPAKIP_01654 6.1e-39 EGP Major facilitator superfamily
PJOPAKIP_01655 1.1e-163 dkgB S Oxidoreductase, aldo keto reductase family protein
PJOPAKIP_01656 3e-63 def2 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
PJOPAKIP_01657 1e-153
PJOPAKIP_01658 1.2e-22 EGP Major facilitator Superfamily
PJOPAKIP_01659 2.6e-70 xylB 1.1.1.57, 2.7.1.17 G FGGY family of carbohydrate kinases, C-terminal domain
PJOPAKIP_01660 5.9e-230 xylR GK ROK family
PJOPAKIP_01662 1.3e-36 rpmE J Binds the 23S rRNA
PJOPAKIP_01663 2.6e-189 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PJOPAKIP_01664 1.3e-176 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PJOPAKIP_01665 3.4e-42 yncA 2.3.1.18, 2.3.1.79 S O-acyltransferase activity
PJOPAKIP_01666 4e-119 ywlC 2.7.7.87 J Belongs to the SUA5 family
PJOPAKIP_01667 7.1e-210 tagO 2.7.8.33, 2.7.8.35 M Glycosyl transferase family 4
PJOPAKIP_01668 4.8e-293 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PJOPAKIP_01669 2.2e-122 orn L 3'-to-5' exoribonuclease specific for small oligoribonucleotides
PJOPAKIP_01670 4e-270 recD2 3.6.4.12 L PIF1-like helicase
PJOPAKIP_01671 0.0 S AMMECR1
PJOPAKIP_01672 1.9e-233 pflA 1.97.1.4 O Radical SAM superfamily
PJOPAKIP_01673 6.6e-23 GT87 NU Tfp pilus assembly protein FimV
PJOPAKIP_01674 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PJOPAKIP_01675 6.7e-51 L Single-strand binding protein family
PJOPAKIP_01676 0.0 pepO 3.4.24.71 O Peptidase family M13
PJOPAKIP_01677 8.7e-99 S Short repeat of unknown function (DUF308)
PJOPAKIP_01678 9.2e-152 map 3.4.11.18 E Methionine aminopeptidase
PJOPAKIP_01679 1.1e-247 gltA 2.3.3.1 C Citrate synthase, C-terminal domain
PJOPAKIP_01680 3.7e-145 dapD 2.3.1.117 E Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA
PJOPAKIP_01681 6.4e-212 K WYL domain
PJOPAKIP_01682 0.0 snf 2.7.11.1 KL Psort location Cytoplasmic, score 8.87
PJOPAKIP_01683 7.4e-80 S PFAM Uncharacterised protein family UPF0150
PJOPAKIP_01684 5e-34 XK27_03610 K Acetyltransferase (GNAT) domain
PJOPAKIP_01685 7.1e-84 vsr L May nick specific sequences that contain T G mispairs resulting from m5C-deamination
PJOPAKIP_01686 3.8e-201 afr_2 S Oxidoreductase family, NAD-binding Rossmann fold
PJOPAKIP_01687 5.5e-236 aspB E Aminotransferase class-V
PJOPAKIP_01688 2.5e-37 ppx 3.6.1.11, 3.6.1.40 FP Ppx/GppA phosphatase family
PJOPAKIP_01689 4.6e-205 S Endonuclease/Exonuclease/phosphatase family
PJOPAKIP_01691 2.4e-33 wecD 2.3.1.210 K -acetyltransferase
PJOPAKIP_01692 8.2e-78 F Nucleoside 2-deoxyribosyltransferase
PJOPAKIP_01693 1.9e-65 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PJOPAKIP_01694 0.0 fadD 6.2.1.3 I AMP-binding enzyme
PJOPAKIP_01695 3.4e-94 ywrO 1.6.5.2 S Flavodoxin-like fold
PJOPAKIP_01696 1.3e-45 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PJOPAKIP_01697 1.1e-256 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PJOPAKIP_01698 0.0 nrdD 1.1.98.6 F Anaerobic ribonucleoside-triphosphate reductase
PJOPAKIP_01699 1.9e-135 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
PJOPAKIP_01700 6.8e-89 yorS 3.1.3.5 S 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
PJOPAKIP_01701 2.1e-53 recE 2.7.7.7, 3.6.4.12 L Psort location Cytoplasmic, score
PJOPAKIP_01707 7.9e-38 S Fic/DOC family
PJOPAKIP_01709 7.2e-27
PJOPAKIP_01710 2.3e-23 S IrrE N-terminal-like domain
PJOPAKIP_01712 1.1e-10
PJOPAKIP_01713 0.0 hgdC I CoA enzyme activase uncharacterised domain (DUF2229)
PJOPAKIP_01714 6.8e-253 gshA 6.3.2.2 H Glutamate-cysteine ligase family 2(GCS2)
PJOPAKIP_01715 1.1e-129 K Bacterial regulatory proteins, tetR family
PJOPAKIP_01716 0.0 bgl2 3.2.1.21 GH3 G Fibronectin type III-like domain
PJOPAKIP_01717 1.1e-45 S Nucleotidyltransferase domain
PJOPAKIP_01718 0.0 5.1.3.2 GM ADP-glyceromanno-heptose 6-epimerase activity
PJOPAKIP_01719 3.9e-162
PJOPAKIP_01720 0.0 S Uncharacterised protein conserved in bacteria (DUF2194)
PJOPAKIP_01721 8.2e-276 pelF GT4 M Domain of unknown function (DUF3492)
PJOPAKIP_01722 4e-276 pelG S Putative exopolysaccharide Exporter (EPS-E)
PJOPAKIP_01723 0.0 cotH M CotH kinase protein
PJOPAKIP_01724 6.5e-156 P VTC domain
PJOPAKIP_01725 2.3e-111 S Domain of unknown function (DUF4956)
PJOPAKIP_01726 0.0 yliE T Putative diguanylate phosphodiesterase
PJOPAKIP_01727 0.0 V ABC transporter, ATP-binding protein
PJOPAKIP_01728 0.0 V ABC transporter transmembrane region
PJOPAKIP_01729 6.1e-135 rbsR K helix_turn _helix lactose operon repressor
PJOPAKIP_01730 2.4e-165 rihB 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PJOPAKIP_01731 9e-198 EGP Major facilitator Superfamily
PJOPAKIP_01732 4.4e-12 iunH2 3.2.2.1 F Inosine-uridine preferring nucleoside hydrolase
PJOPAKIP_01733 3.9e-11 EGP Major Facilitator Superfamily
PJOPAKIP_01734 1.2e-161 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PJOPAKIP_01735 2e-183 lacR K Transcriptional regulator, LacI family
PJOPAKIP_01736 1.8e-113 G Psort location Cytoplasmic, score 8.87
PJOPAKIP_01737 5.8e-246 malY 4.4.1.8 E Aminotransferase, class I II
PJOPAKIP_01738 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PJOPAKIP_01739 0.0 L DEAD-like helicases superfamily
PJOPAKIP_01740 3.9e-103 cas5d S CRISPR-associated protein (Cas_Cas5)
PJOPAKIP_01741 2e-242 csd1 S CRISPR-associated protein (Cas_Csd1)
PJOPAKIP_01742 9.6e-148 cas7c L CRISPR-associated protein Cas7
PJOPAKIP_01743 1.1e-114 cas4 3.1.12.1 L Domain of unknown function DUF83
PJOPAKIP_01744 3.2e-184 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PJOPAKIP_01745 1.7e-42 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
PJOPAKIP_01746 7.4e-252 L HTH-like domain
PJOPAKIP_01747 4.6e-281 L PFAM Integrase catalytic
PJOPAKIP_01748 4.2e-228 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PJOPAKIP_01749 1.1e-46 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PJOPAKIP_01750 0.0 ilvD 4.2.1.9 H Belongs to the IlvD Edd family
PJOPAKIP_01751 3.2e-186 fmt 2.1.1.176, 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PJOPAKIP_01752 5e-133 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PJOPAKIP_01753 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PJOPAKIP_01754 4.7e-126 serB 3.1.3.3 E haloacid dehalogenase-like hydrolase
PJOPAKIP_01755 2.7e-126 apl 3.1.3.1 S SNARE associated Golgi protein
PJOPAKIP_01756 1e-290 arc O AAA ATPase forming ring-shaped complexes
PJOPAKIP_01757 0.0 dop 3.5.1.119, 6.3.1.19 S Pup-ligase protein
PJOPAKIP_01758 2.2e-173 hisN 3.1.3.25 G Inositol monophosphatase family
PJOPAKIP_01760 3.9e-281 pafA 6.3.1.19 O Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
PJOPAKIP_01761 6.2e-42 hup L Belongs to the bacterial histone-like protein family
PJOPAKIP_01762 0.0 S Lysylphosphatidylglycerol synthase TM region
PJOPAKIP_01763 1.7e-281 purB 4.3.2.2 F Adenylosuccinate lyase C-terminal
PJOPAKIP_01764 1e-108 ykoE S ABC-type cobalt transport system, permease component
PJOPAKIP_01765 6.2e-13
PJOPAKIP_01766 1.1e-305 S PGAP1-like protein
PJOPAKIP_01767 4.7e-47
PJOPAKIP_01768 1.8e-41
PJOPAKIP_01769 5.4e-168 S von Willebrand factor (vWF) type A domain
PJOPAKIP_01770 1.5e-184 S von Willebrand factor (vWF) type A domain
PJOPAKIP_01771 2.5e-87
PJOPAKIP_01772 3.7e-171 S Protein of unknown function DUF58
PJOPAKIP_01773 3.9e-193 moxR S ATPase family associated with various cellular activities (AAA)
PJOPAKIP_01774 3.4e-134 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PJOPAKIP_01775 1.1e-76 S LytR cell envelope-related transcriptional attenuator
PJOPAKIP_01776 6.7e-37 K 'Cold-shock' DNA-binding domain
PJOPAKIP_01777 2.7e-291 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PJOPAKIP_01778 1.7e-34 S Proteins of 100 residues with WXG
PJOPAKIP_01779 4.5e-67
PJOPAKIP_01780 1.5e-132 KT Response regulator receiver domain protein
PJOPAKIP_01781 0.0 2.7.13.3 T ATPase histidine kinase DNA gyrase B HSP90 domain protein
PJOPAKIP_01782 1.5e-65 cspB K 'Cold-shock' DNA-binding domain
PJOPAKIP_01783 6e-163 S Protein of unknown function (DUF3027)
PJOPAKIP_01784 9.2e-178 uspA T Belongs to the universal stress protein A family
PJOPAKIP_01785 0.0 clpC O ATPase family associated with various cellular activities (AAA)
PJOPAKIP_01786 1.2e-255 codA 3.5.4.1, 3.5.4.21 F Amidohydrolase family
PJOPAKIP_01787 8.1e-282 purR QT Purine catabolism regulatory protein-like family
PJOPAKIP_01788 7.5e-250 proP EGP Sugar (and other) transporter
PJOPAKIP_01789 1.7e-142 3.5.2.10 S Creatinine amidohydrolase
PJOPAKIP_01790 0.0 3.1.3.5 F 5'-nucleotidase, C-terminal domain
PJOPAKIP_01791 2.3e-204 3.1.26.12, 3.2.1.8 S Domain of Unknown Function (DUF349)
PJOPAKIP_01792 3e-262 hisS 6.1.1.21 J Histidyl-tRNA synthetase
PJOPAKIP_01793 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PJOPAKIP_01794 8.8e-181 gmk 1.1.1.23, 2.7.4.8 S Protein of unknown function (DUF559)
PJOPAKIP_01795 1.2e-141 gluA 3.6.3.21 E ATP-binding protein of ABC transporter for glutamate K02028
PJOPAKIP_01796 4.3e-155 gluB ET Belongs to the bacterial solute-binding protein 3 family
PJOPAKIP_01797 4.4e-110 gluC E Binding-protein-dependent transport system inner membrane component
PJOPAKIP_01798 1.2e-186 gluD E Binding-protein-dependent transport system inner membrane component
PJOPAKIP_01799 1.7e-287 phoN I PAP2 superfamily
PJOPAKIP_01800 0.0 3.1.3.5 F 5'-nucleotidase, C-terminal domain
PJOPAKIP_01801 1.4e-43 T Pfam Adenylate and Guanylate cyclase catalytic domain
PJOPAKIP_01802 4.9e-180 2.7.4.1 S Polyphosphate kinase 2 (PPK2)
PJOPAKIP_01803 0.0 L DEAD DEAH box helicase
PJOPAKIP_01804 1.3e-246 rarA L Recombination factor protein RarA
PJOPAKIP_01805 4.2e-251 EGP Major facilitator Superfamily
PJOPAKIP_01806 6.5e-187 ghrA EH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
PJOPAKIP_01807 5.7e-48 J TM2 domain
PJOPAKIP_01808 2.2e-55 yvlD S Mycobacterial 4 TMS phage holin, superfamily IV
PJOPAKIP_01809 9.1e-47 yhbY J CRS1_YhbY
PJOPAKIP_01810 0.0 ecfA GP ABC transporter, ATP-binding protein
PJOPAKIP_01811 3.4e-99 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PJOPAKIP_01812 6.4e-198 S Glycosyltransferase, group 2 family protein
PJOPAKIP_01813 1.2e-140 ppgK 2.7.1.2, 2.7.1.63 GK ROK family
PJOPAKIP_01814 6.1e-238 E Aminotransferase class I and II
PJOPAKIP_01815 4.1e-142 bioM P ATPases associated with a variety of cellular activities
PJOPAKIP_01816 0.0 M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PJOPAKIP_01817 0.0 S Tetratricopeptide repeat
PJOPAKIP_01818 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PJOPAKIP_01819 1.9e-203 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PJOPAKIP_01820 0.0 G Glycosyl hydrolase family 20, domain 2
PJOPAKIP_01821 2.4e-104 L Helix-turn-helix domain
PJOPAKIP_01822 3.1e-214 G Domain of unknown function (DUF4432)
PJOPAKIP_01823 1.3e-25 tam 2.1.1.144, 2.1.1.197 S Methyltransferase domain
PJOPAKIP_01824 1.3e-28 K Bacterial regulatory proteins, tetR family
PJOPAKIP_01825 1.2e-113 M L,D-transpeptidase catalytic domain
PJOPAKIP_01826 3.5e-135 ybbM V Uncharacterised protein family (UPF0014)
PJOPAKIP_01827 4.2e-127 ybbL V ATPases associated with a variety of cellular activities
PJOPAKIP_01828 1.5e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PJOPAKIP_01829 6.2e-73 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PJOPAKIP_01830 1.4e-240 carA 6.3.5.5 F Belongs to the CarA family
PJOPAKIP_01831 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain
PJOPAKIP_01832 4.4e-169 pyrF 2.4.2.10, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PJOPAKIP_01833 1.1e-104 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
PJOPAKIP_01834 3.5e-134 dnaQ 2.7.7.7 L Exonuclease, DNA polymerase III, epsilon subunit family
PJOPAKIP_01835 0.0 tetP J Elongation factor G, domain IV
PJOPAKIP_01836 2.8e-125 ypfH S Phospholipase/Carboxylesterase
PJOPAKIP_01837 4.1e-231 metC 2.5.1.48, 4.4.1.8 E Cys/Met metabolism PLP-dependent enzyme
PJOPAKIP_01838 2.5e-42 XAC3035 O Glutaredoxin
PJOPAKIP_01839 8.9e-155 E Glyoxalase-like domain
PJOPAKIP_01840 5e-145 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PJOPAKIP_01841 6e-199 4.1.1.37 H Uroporphyrinogen decarboxylase (URO-D)
PJOPAKIP_01842 4.5e-219 E Receptor family ligand binding region
PJOPAKIP_01843 0.0 E Branched-chain amino acid transport system / permease component
PJOPAKIP_01844 0.0 E ATPases associated with a variety of cellular activities
PJOPAKIP_01845 2.3e-229 S Peptidase dimerisation domain
PJOPAKIP_01846 1.1e-242 2.5.1.49 E Cys/Met metabolism PLP-dependent enzyme
PJOPAKIP_01847 1.6e-33 XAC3035 O Glutaredoxin
PJOPAKIP_01848 1.9e-138 3.6.3.21 E ATPases associated with a variety of cellular activities
PJOPAKIP_01849 4e-142 tcyA ET Bacterial periplasmic substrate-binding proteins
PJOPAKIP_01850 5.6e-110 E Binding-protein-dependent transport system inner membrane component
PJOPAKIP_01851 1.6e-110 XK27_08050 O prohibitin homologues
PJOPAKIP_01852 5.1e-203 S Domain of unknown function (DUF4143)
PJOPAKIP_01853 4.8e-76 L Transposase and inactivated derivatives IS30 family
PJOPAKIP_01854 1.5e-64 V ABC transporter
PJOPAKIP_01856 1.2e-10 6.3.1.2 E glutamine synthetase
PJOPAKIP_01857 1.7e-15 S Amidohydrolase
PJOPAKIP_01858 1.3e-156 S Patatin-like phospholipase
PJOPAKIP_01859 1.1e-149 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PJOPAKIP_01860 3.6e-168 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine
PJOPAKIP_01861 2.1e-126 S Vitamin K epoxide reductase
PJOPAKIP_01862 8.5e-170 PPA1328 3.1.3.97 S DNA polymerase alpha chain like domain
PJOPAKIP_01863 2.7e-32 S Protein of unknown function (DUF3107)
PJOPAKIP_01864 1.4e-285 mphA S Aminoglycoside phosphotransferase
PJOPAKIP_01865 1.3e-290 uvrD2 3.6.4.12 L DNA helicase
PJOPAKIP_01866 1.5e-308 S Zincin-like metallopeptidase
PJOPAKIP_01867 8.4e-162 lon T Belongs to the peptidase S16 family
PJOPAKIP_01868 1.2e-44 S Protein of unknown function (DUF3052)
PJOPAKIP_01870 3.4e-252 2.7.11.1 NU Tfp pilus assembly protein FimV
PJOPAKIP_01871 4.6e-219 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PJOPAKIP_01872 5.7e-233 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PJOPAKIP_01873 0.0 I acetylesterase activity
PJOPAKIP_01874 2.9e-128 recO L Involved in DNA repair and RecF pathway recombination
PJOPAKIP_01875 6.5e-153 uppS 2.5.1.31, 2.5.1.86, 2.5.1.88 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PJOPAKIP_01876 8.7e-210 iunH1 3.2.2.1 F nucleoside hydrolase
PJOPAKIP_01877 1.1e-203 P NMT1/THI5 like
PJOPAKIP_01878 1.5e-138 ytlD1 2.7.1.50 P Binding-protein-dependent transport system inner membrane component
PJOPAKIP_01879 1.6e-304 cscA 3.2.1.26 GH32 G Belongs to the glycosyl hydrolase 32 family
PJOPAKIP_01880 6.2e-241 lacY P LacY proton/sugar symporter
PJOPAKIP_01881 1.8e-195 K helix_turn _helix lactose operon repressor
PJOPAKIP_01882 3.9e-257 O SERine Proteinase INhibitors
PJOPAKIP_01883 4.5e-191
PJOPAKIP_01884 6.1e-123 K helix_turn_helix, Lux Regulon
PJOPAKIP_01885 1.9e-219 2.7.13.3 T Histidine kinase
PJOPAKIP_01886 7.1e-248 ydjK G Sugar (and other) transporter
PJOPAKIP_01887 5.6e-62 S Thiamine-binding protein
PJOPAKIP_01888 1e-145 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PJOPAKIP_01889 1.7e-229 O AAA domain (Cdc48 subfamily)
PJOPAKIP_01890 0.0 thiC 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PJOPAKIP_01891 3e-165 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PJOPAKIP_01892 4.1e-294 glyQS 6.1.1.14 J Catalyzes the attachment of glycine to tRNA(Gly)
PJOPAKIP_01893 8.3e-240 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PJOPAKIP_01894 9.3e-196 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PJOPAKIP_01895 3.6e-82 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PJOPAKIP_01896 5.5e-44 yggT S YGGT family
PJOPAKIP_01897 1.7e-39 tccB2 V DivIVA protein
PJOPAKIP_01898 8.3e-91 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PJOPAKIP_01899 1.3e-179 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
PJOPAKIP_01900 6.4e-138 S Virulence factor BrkB
PJOPAKIP_01901 0.0 dnaE 2.7.7.7 L DNA polymerase III alpha subunit
PJOPAKIP_01902 3.1e-75 yneG S Domain of unknown function (DUF4186)
PJOPAKIP_01903 0.0 4.2.1.53 S MCRA family
PJOPAKIP_01904 3.3e-94 K acetyltransferase
PJOPAKIP_01905 1.6e-123 3.2.1.18, 3.2.1.51 GH29,GH33 G BNR repeat-like domain
PJOPAKIP_01906 6e-137 nanL 4.3.3.7 EM Dihydrodipicolinate synthetase family
PJOPAKIP_01907 6.2e-248 G Bacterial extracellular solute-binding protein
PJOPAKIP_01908 5.2e-226 G Bacterial extracellular solute-binding protein
PJOPAKIP_01909 2.4e-223 G Bacterial extracellular solute-binding protein
PJOPAKIP_01910 8.9e-204 G Glycosyl hydrolase family 20, domain 2
PJOPAKIP_01911 1.2e-31 3.1.3.18 S phosphoglycolate phosphatase activity
PJOPAKIP_01912 1.5e-138 G Extracellular solute-binding protein
PJOPAKIP_01913 2.5e-117 YSH1 S Metallo-beta-lactamase superfamily
PJOPAKIP_01914 3.8e-100 gtsC P Binding-protein-dependent transport system inner membrane component
PJOPAKIP_01915 6.2e-102 gtsB G PFAM Binding-protein-dependent transport system inner membrane component
PJOPAKIP_01916 2e-128 malK P Belongs to the ABC transporter superfamily
PJOPAKIP_01917 2e-94 M1-431 S Protein of unknown function (DUF1706)
PJOPAKIP_01918 1.7e-166 L Helix-turn-helix domain
PJOPAKIP_01919 9.9e-41 L Resolvase, N terminal domain
PJOPAKIP_01920 2.2e-211 phoN I PAP2 superfamily
PJOPAKIP_01921 1.3e-114 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PJOPAKIP_01922 1.8e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PJOPAKIP_01923 2.9e-212 ugpQ 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
PJOPAKIP_01924 2.8e-215 gluQ 6.1.1.17 J Belongs to the class-I aminoacyl-tRNA synthetase family
PJOPAKIP_01925 0.0 clpB O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
PJOPAKIP_01926 5.8e-283 hutH 4.3.1.3 E Aromatic amino acid lyase
PJOPAKIP_01927 5.1e-157 S Auxin Efflux Carrier
PJOPAKIP_01928 1.4e-158 fahA Q Fumarylacetoacetate (FAA) hydrolase family
PJOPAKIP_01929 2.5e-28 S Domain of unknown function (DUF4190)
PJOPAKIP_01930 1.4e-233 glf 5.4.99.9 M UDP-galactopyranose mutase
PJOPAKIP_01931 1.6e-203 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PJOPAKIP_01932 2.1e-282 S Psort location Cytoplasmic, score
PJOPAKIP_01933 1.4e-141
PJOPAKIP_01934 1.3e-97 L Transposase and inactivated derivatives IS30 family
PJOPAKIP_01935 2.3e-16 L Transposase and inactivated derivatives IS30 family
PJOPAKIP_01936 1e-50 3.2.1.97 GH101 M Cell wall-binding repeat protein
PJOPAKIP_01937 6.5e-152 cps3I G Psort location CytoplasmicMembrane, score 9.99
PJOPAKIP_01938 1e-216
PJOPAKIP_01939 6.9e-157 ykoT 2.4.1.83 GT2 M Glycosyl transferase family 2
PJOPAKIP_01940 2.9e-226 glf 5.4.99.9 M UDP-galactopyranose mutase
PJOPAKIP_01941 0.0 glfT 2.4.1.288 GT2 S Glycosyltransferase like family 2
PJOPAKIP_01942 1.2e-69 3.2.1.11 GH66 GM Bacterial Ig-like domain (group 4)
PJOPAKIP_01943 1.9e-226 rgpD 3.6.3.38 GM ABC transporter, ATP-binding protein
PJOPAKIP_01944 2.3e-140 rgpC U Transport permease protein
PJOPAKIP_01945 0.0 2.4.1.288 GT2 S Glycosyltransferase like family 2
PJOPAKIP_01946 2.4e-183 S Polysaccharide pyruvyl transferase
PJOPAKIP_01947 9.3e-246 2.4.1.288 GT2 S Glycosyltransferase like family 2
PJOPAKIP_01948 4.3e-109 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PJOPAKIP_01949 1.5e-217 I transferase activity, transferring acyl groups other than amino-acyl groups
PJOPAKIP_01950 0.0 pflA S Protein of unknown function (DUF4012)
PJOPAKIP_01951 6.9e-249 V ABC transporter permease
PJOPAKIP_01952 6e-197 V ABC transporter
PJOPAKIP_01954 7e-135 T HD domain
PJOPAKIP_01955 6.5e-159 S Glutamine amidotransferase domain
PJOPAKIP_01956 0.0 kup P Transport of potassium into the cell
PJOPAKIP_01957 4.1e-186 tatD L TatD related DNase
PJOPAKIP_01959 3.8e-154 lipA I Hydrolase, alpha beta domain protein
PJOPAKIP_01960 1.8e-113 xylE U Sugar (and other) transporter
PJOPAKIP_01961 1.8e-62 2.7.1.2 GK ROK family
PJOPAKIP_01962 4.4e-89 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
PJOPAKIP_01963 5.5e-28 K helix_turn_helix, arabinose operon control protein
PJOPAKIP_01964 1.6e-107 XK27_00240 K Fic/DOC family
PJOPAKIP_01965 1.3e-17 L HTH-like domain
PJOPAKIP_01966 1.7e-196 S Fic/DOC family
PJOPAKIP_01967 0.0 yknV V ABC transporter
PJOPAKIP_01968 0.0 mdlA2 V ABC transporter
PJOPAKIP_01969 1.6e-268 S ATPase domain predominantly from Archaea
PJOPAKIP_01970 1.5e-41 S Domain of unknown function (DUF4143)
PJOPAKIP_01971 4.9e-116 S AAA domain
PJOPAKIP_01972 2.3e-249 EGP Major Facilitator Superfamily
PJOPAKIP_01974 0.0 oppA E Bacterial extracellular solute-binding proteins, family 5 Middle
PJOPAKIP_01975 0.0 oppD P Belongs to the ABC transporter superfamily
PJOPAKIP_01976 4.1e-173 dppC EP N-terminal TM domain of oligopeptide transport permease C
PJOPAKIP_01977 1e-176 appB EP Binding-protein-dependent transport system inner membrane component
PJOPAKIP_01978 1.1e-262 pepC 3.4.22.40 E Peptidase C1-like family
PJOPAKIP_01979 5.1e-170 gmk 1.1.1.23, 2.7.4.8 S Protein conserved in bacteria
PJOPAKIP_01980 3.6e-48
PJOPAKIP_01981 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PJOPAKIP_01982 4.7e-114
PJOPAKIP_01983 9.5e-181 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PJOPAKIP_01985 2e-159 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
PJOPAKIP_01986 0.0 lmrA2 V ABC transporter transmembrane region
PJOPAKIP_01987 0.0 lmrA1 V ABC transporter, ATP-binding protein
PJOPAKIP_01988 1.2e-89 ydgJ K helix_turn_helix multiple antibiotic resistance protein
PJOPAKIP_01989 2.7e-272 cycA E Amino acid permease
PJOPAKIP_01990 0.0 V FtsX-like permease family
PJOPAKIP_01991 1.8e-127 V ABC transporter
PJOPAKIP_01992 2.7e-100 K Transcriptional regulator C-terminal region
PJOPAKIP_01993 5.4e-270 aroP E aromatic amino acid transport protein AroP K03293
PJOPAKIP_01994 1.2e-274 S ATPase domain predominantly from Archaea
PJOPAKIP_01995 5.6e-133 L Transposase
PJOPAKIP_01996 1.1e-104 S Protein of unknown function, DUF624
PJOPAKIP_01997 1.5e-152 rafG G ABC transporter permease
PJOPAKIP_01998 2.6e-147 msmF G Binding-protein-dependent transport system inner membrane component
PJOPAKIP_01999 3.8e-182 K Psort location Cytoplasmic, score
PJOPAKIP_02000 6.6e-248 amyE G Bacterial extracellular solute-binding protein
PJOPAKIP_02001 7.9e-134 G Phosphoglycerate mutase family
PJOPAKIP_02002 2.6e-59 S Protein of unknown function (DUF4235)
PJOPAKIP_02003 1.2e-137 nfrA 1.5.1.38, 1.5.1.39 C Nitroreductase family
PJOPAKIP_02004 0.0 pip S YhgE Pip domain protein
PJOPAKIP_02005 9.1e-272 pip S YhgE Pip domain protein
PJOPAKIP_02006 2.7e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PJOPAKIP_02007 1e-72 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PJOPAKIP_02008 5.6e-113 nusG K Participates in transcription elongation, termination and antitermination
PJOPAKIP_02009 1.2e-32 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PJOPAKIP_02011 3.2e-228 aspC E DegT/DnrJ/EryC1/StrS aminotransferase family
PJOPAKIP_02012 7.4e-203 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PJOPAKIP_02013 1.1e-303 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PJOPAKIP_02014 8.8e-40 rpmA J Ribosomal L27 protein
PJOPAKIP_02015 2.4e-47 rplU J This protein binds to 23S rRNA in the presence of protein L20
PJOPAKIP_02016 0.0 rne 3.1.26.12 J Ribonuclease E/G family
PJOPAKIP_02017 9.2e-234 dapE 3.5.1.18 E Peptidase dimerisation domain
PJOPAKIP_02018 5.5e-167 mdcF S Transporter, auxin efflux carrier (AEC) family protein
PJOPAKIP_02019 5.7e-166 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
PJOPAKIP_02020 1.6e-148 S Amidohydrolase
PJOPAKIP_02021 6.6e-200 fucP G Major Facilitator Superfamily
PJOPAKIP_02022 2.8e-148 IQ KR domain
PJOPAKIP_02023 7.8e-249 4.2.1.68 M Enolase C-terminal domain-like
PJOPAKIP_02024 5.7e-186 K Bacterial regulatory proteins, lacI family
PJOPAKIP_02025 1.8e-254 V Efflux ABC transporter, permease protein
PJOPAKIP_02026 7e-143 V ATPases associated with a variety of cellular activities
PJOPAKIP_02028 6.3e-16 S Protein of unknown function (DUF1778)
PJOPAKIP_02029 3e-08 K Acetyltransferase (GNAT) family
PJOPAKIP_02030 6.7e-281 maf 1.1.1.25, 2.1.1.190, 3.6.1.55, 3.6.1.67 DF Maf-like protein
PJOPAKIP_02031 3.5e-205 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PJOPAKIP_02032 1.2e-239 hom 1.1.1.3 E Homoserine dehydrogenase
PJOPAKIP_02033 4.4e-294 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PJOPAKIP_02034 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PJOPAKIP_02035 1.9e-175 K LysR substrate binding domain protein
PJOPAKIP_02036 1.1e-244 patB 4.4.1.8 E Aminotransferase, class I II
PJOPAKIP_02037 1.2e-255 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PJOPAKIP_02038 1.5e-255 nox 1.6.3.4 C Pyridine nucleotide-disulphide oxidoreductase
PJOPAKIP_02039 7.5e-208 pyrD 1.3.1.14, 1.3.98.1 F Dihydroorotate dehydrogenase
PJOPAKIP_02040 1.2e-105 S CAAX protease self-immunity
PJOPAKIP_02042 1.5e-10 K helix_turn_helix, Lux Regulon
PJOPAKIP_02043 9.3e-132 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PJOPAKIP_02044 1.9e-272 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PJOPAKIP_02045 2.2e-140 ltbR K Transcriptional regulator, IclR family, C-terminal domain protein
PJOPAKIP_02046 4.7e-46 lacA 2.3.1.18, 2.3.1.79 S Maltose acetyltransferase
PJOPAKIP_02048 3.6e-41 S Phospholipase/Carboxylesterase
PJOPAKIP_02049 1.5e-172 3.4.22.70 M Sortase family
PJOPAKIP_02050 1.3e-14 M domain protein
PJOPAKIP_02051 0.0 M cell wall anchor domain protein
PJOPAKIP_02052 6.2e-230 S Calcineurin-like phosphoesterase
PJOPAKIP_02053 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
PJOPAKIP_02054 1e-218 mutT 3.6.1.13, 3.6.1.55 LT Phosphoglycerate mutase family
PJOPAKIP_02055 3.1e-116
PJOPAKIP_02056 8e-185 S AAA domain
PJOPAKIP_02057 2.6e-214 lacS G Psort location CytoplasmicMembrane, score 10.00
PJOPAKIP_02058 1.5e-270 lacS G Psort location CytoplasmicMembrane, score 10.00
PJOPAKIP_02059 0.0 lacL 3.2.1.23 G Psort location Cytoplasmic, score 8.87
PJOPAKIP_02060 1.8e-95 S Protein of unknown function, DUF624
PJOPAKIP_02061 1.2e-244 4.2.1.68 M Enolase C-terminal domain-like
PJOPAKIP_02062 2.9e-145 IQ KR domain
PJOPAKIP_02063 2.3e-151 dapA 4.1.2.28, 4.3.3.7 EM Dihydrodipicolinate synthetase family
PJOPAKIP_02064 4.2e-69 fucU 5.1.3.29 G RbsD / FucU transport protein family
PJOPAKIP_02065 4.3e-256 fucA 3.2.1.51 GH29 G Alpha-L-fucosidase
PJOPAKIP_02066 0.0 3.2.1.51 GH95 G Glycosyl hydrolase family 65, N-terminal domain
PJOPAKIP_02067 2.1e-24
PJOPAKIP_02068 3.4e-13 G Bacterial extracellular solute-binding protein
PJOPAKIP_02069 1.6e-150 G Binding-protein-dependent transport system inner membrane component
PJOPAKIP_02070 3.9e-152 G Binding-protein-dependent transport system inner membrane component
PJOPAKIP_02071 1e-178 2.7.7.7 L Transposase, Mutator family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)