ORF_ID e_value Gene_name EC_number CAZy COGs Description
APKDMPOB_00001 5.3e-256 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
APKDMPOB_00002 7.7e-200 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
APKDMPOB_00003 1.1e-29 yyzM S Protein conserved in bacteria
APKDMPOB_00004 7.3e-203 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
APKDMPOB_00005 1.2e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
APKDMPOB_00006 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
APKDMPOB_00007 1.7e-39 yabO J Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
APKDMPOB_00008 3.9e-60 divIC D Septum formation initiator
APKDMPOB_00010 7.6e-236 XK27_09285 3.5.2.6 V Beta-lactamase enzyme family
APKDMPOB_00011 1.4e-237 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
APKDMPOB_00012 2.2e-96 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
APKDMPOB_00013 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
APKDMPOB_00014 1.6e-147 L Transposase
APKDMPOB_00015 1.6e-45 L Transposase
APKDMPOB_00016 5e-35 L transposase activity
APKDMPOB_00017 1.4e-22 L Transposase
APKDMPOB_00018 2.9e-31 L transposition
APKDMPOB_00019 1.3e-37 L Integrase core domain protein
APKDMPOB_00020 5.5e-30 L Integrase core domain protein
APKDMPOB_00033 5.3e-11
APKDMPOB_00039 3.6e-138 mreC M Involved in formation and maintenance of cell shape
APKDMPOB_00040 3.1e-87 mreD M Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
APKDMPOB_00041 9.2e-94 usp 3.5.1.28 CBM50 S CHAP domain
APKDMPOB_00042 4.3e-175 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
APKDMPOB_00043 2.5e-26
APKDMPOB_00044 5.9e-219 araT 2.6.1.1 E Aminotransferase
APKDMPOB_00045 8.5e-142 recO L Involved in DNA repair and RecF pathway recombination
APKDMPOB_00046 5.1e-179 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
APKDMPOB_00047 4.2e-34 acpP1 IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
APKDMPOB_00048 7.6e-129 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
APKDMPOB_00049 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
APKDMPOB_00050 3.3e-272 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
APKDMPOB_00051 2.4e-184 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
APKDMPOB_00052 2e-100 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
APKDMPOB_00053 1.4e-292 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
APKDMPOB_00054 5.2e-87 L transposase activity
APKDMPOB_00055 1.9e-50 L transposition
APKDMPOB_00056 3.8e-31 L Integrase core domain protein
APKDMPOB_00057 1.4e-161 S CHAP domain
APKDMPOB_00058 5.9e-241 purD 6.3.4.13 F Belongs to the GARS family
APKDMPOB_00059 4.9e-76 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
APKDMPOB_00060 9.3e-203 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
APKDMPOB_00061 2.7e-97 1.1.1.169 H Ketopantoate reductase
APKDMPOB_00062 3.6e-32
APKDMPOB_00063 6.2e-134 J Domain of unknown function (DUF4041)
APKDMPOB_00065 3.6e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
APKDMPOB_00066 0.0 argS 6.1.1.19 J Catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
APKDMPOB_00067 8.2e-70 argR K Regulates arginine biosynthesis genes
APKDMPOB_00068 1.5e-56 ymcA 3.6.3.21 S Belongs to the UPF0342 family
APKDMPOB_00069 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
APKDMPOB_00070 1.8e-78 S Protein of unknown function (DUF3021)
APKDMPOB_00071 5.4e-69 K LytTr DNA-binding domain
APKDMPOB_00073 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
APKDMPOB_00075 1.7e-102 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
APKDMPOB_00076 7.8e-105 tag 3.2.2.20 L 3-methyladenine DNA glycosylase
APKDMPOB_00077 3e-229 cinA 3.5.1.42 S Belongs to the CinA family
APKDMPOB_00078 3e-204 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
APKDMPOB_00079 3.7e-64 spxA_2 1.20.4.1 P Belongs to the ArsC family
APKDMPOB_00085 2.6e-10
APKDMPOB_00088 1.9e-07
APKDMPOB_00093 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
APKDMPOB_00094 1.1e-234 pepS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
APKDMPOB_00095 5.5e-36 XK27_02060 S Transglycosylase associated protein
APKDMPOB_00096 5e-67 badR K Transcriptional regulator, marr family
APKDMPOB_00097 6.1e-94 S reductase
APKDMPOB_00098 1.6e-149 yocD 3.4.17.13 V proteins, homologs of microcin C7 resistance protein MccF
APKDMPOB_00099 5.4e-09 yocD 3.4.17.13 V proteins, homologs of microcin C7 resistance protein MccF
APKDMPOB_00101 4.1e-136 rpsB J Belongs to the universal ribosomal protein uS2 family
APKDMPOB_00102 3.6e-180 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
APKDMPOB_00103 6e-82 S Putative small multi-drug export protein
APKDMPOB_00104 1.3e-73 ctsR K Belongs to the CtsR family
APKDMPOB_00105 0.0 clpC O Belongs to the ClpA ClpB family
APKDMPOB_00106 2.5e-212 dacA 3.4.16.4 M Belongs to the peptidase S11 family
APKDMPOB_00107 9.9e-225 dacA 3.4.16.4 M Belongs to the peptidase S11 family
APKDMPOB_00108 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
APKDMPOB_00109 2.9e-142 S SseB protein N-terminal domain
APKDMPOB_00110 1.9e-112 cysE 2.3.1.30 E serine acetyltransferase
APKDMPOB_00111 6.6e-259 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
APKDMPOB_00112 8e-67 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
APKDMPOB_00115 1.1e-133 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
APKDMPOB_00116 1.6e-91 yacP S RNA-binding protein containing a PIN domain
APKDMPOB_00117 9.8e-155 degV S DegV family
APKDMPOB_00118 1.1e-27 K helix-turn-helix
APKDMPOB_00119 5.2e-181 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
APKDMPOB_00120 2e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
APKDMPOB_00121 2.8e-64 rpsI J Belongs to the universal ribosomal protein uS9 family
APKDMPOB_00122 3.1e-223 int2 L Belongs to the 'phage' integrase family
APKDMPOB_00123 5.3e-41 S Helix-turn-helix domain
APKDMPOB_00124 4.1e-200 L Replication initiation factor
APKDMPOB_00125 2.6e-36
APKDMPOB_00126 1e-06
APKDMPOB_00127 3.2e-101 K DNA-binding helix-turn-helix protein
APKDMPOB_00128 4.7e-141 K Transcriptional activator, Rgg GadR MutR family
APKDMPOB_00132 9.7e-155 V AAA domain, putative AbiEii toxin, Type IV TA system
APKDMPOB_00133 2.5e-70 S ABC-2 family transporter protein
APKDMPOB_00134 2.8e-13
APKDMPOB_00135 4.8e-51 L PFAM Integrase, catalytic core
APKDMPOB_00136 2.2e-44 L PFAM Integrase, catalytic core
APKDMPOB_00137 3.4e-154 L Integrase core domain protein
APKDMPOB_00138 7.8e-40 L Transposase
APKDMPOB_00141 5.7e-95 ywlG S Belongs to the UPF0340 family
APKDMPOB_00142 2.9e-112 treR K trehalose operon
APKDMPOB_00143 4.1e-54 treB 2.7.1.201 G PTS System
APKDMPOB_00144 2.9e-65 treC 3.2.1.93 GH13 G COG0366 Glycosidases
APKDMPOB_00145 2.5e-64 treC 3.2.1.93 GH13 G COG0366 Glycosidases
APKDMPOB_00146 2.2e-35 treC 3.2.1.93 GH13 G COG0366 Glycosidases
APKDMPOB_00147 0.0 pepO 3.4.24.71 O Peptidase family M13
APKDMPOB_00148 9e-63 adhE 1.1.1.1, 1.2.1.10 C Dehydrogenase
APKDMPOB_00149 1.1e-21 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
APKDMPOB_00150 2.2e-53 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
APKDMPOB_00151 4.1e-30 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
APKDMPOB_00152 1.6e-42 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
APKDMPOB_00153 2.2e-54 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
APKDMPOB_00154 2.4e-273 thrC 4.2.3.1 E Threonine synthase
APKDMPOB_00155 7.9e-225 norN V Mate efflux family protein
APKDMPOB_00156 1.8e-57 asp S cog cog1302
APKDMPOB_00157 1.1e-300 yloV S kinase related to dihydroxyacetone kinase
APKDMPOB_00158 6.2e-45 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
APKDMPOB_00159 1.3e-243 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
APKDMPOB_00160 0.0 ilvB 2.2.1.6 EH Acetolactate synthase
APKDMPOB_00161 3.2e-75 ilvN 2.2.1.6 E Acetolactate synthase
APKDMPOB_00162 1.6e-196 ilvC 1.1.1.86 H Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
APKDMPOB_00163 1.8e-237 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
APKDMPOB_00164 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
APKDMPOB_00165 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
APKDMPOB_00166 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
APKDMPOB_00167 1.8e-65 S cog cog4699
APKDMPOB_00168 1.2e-169 comGA NU Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
APKDMPOB_00169 7.2e-153 cglB NU type II secretion system
APKDMPOB_00170 5.5e-42 comGC U Required for transformation and DNA binding
APKDMPOB_00171 2.3e-57 cglD NU Competence protein
APKDMPOB_00172 2.4e-15 NU Type II secretory pathway pseudopilin
APKDMPOB_00173 4.9e-70 comGF U Competence protein ComGF
APKDMPOB_00174 1.1e-12 comGF U Putative Competence protein ComGF
APKDMPOB_00175 2.7e-174 ytxK 2.1.1.72 L DNA methylase
APKDMPOB_00176 1.5e-217 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
APKDMPOB_00177 1.3e-25 lanR K sequence-specific DNA binding
APKDMPOB_00178 2.8e-109 S CAAX amino terminal protease family protein
APKDMPOB_00179 4.4e-130 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
APKDMPOB_00180 1.4e-203 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
APKDMPOB_00181 1.8e-09 S Domain of unknown function (DUF4651)
APKDMPOB_00182 2.1e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
APKDMPOB_00183 3.9e-113 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
APKDMPOB_00184 1.3e-190 yeeE S Sulphur transport
APKDMPOB_00185 1.9e-36 yeeD O sulfur carrier activity
APKDMPOB_00186 1.1e-65 ssb_2 L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
APKDMPOB_00187 6e-91 tadA 3.5.4.1, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
APKDMPOB_00190 7e-158 rrmA 2.1.1.187 Q methyltransferase
APKDMPOB_00191 1.3e-45 S glycolate biosynthetic process
APKDMPOB_00192 8.1e-59 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
APKDMPOB_00193 2.3e-220 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
APKDMPOB_00194 4.5e-94 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
APKDMPOB_00195 1.2e-115 gluP 3.4.21.105 O membrane protein (homolog of Drosophila rhomboid)
APKDMPOB_00196 1.9e-164 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
APKDMPOB_00197 7e-184 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
APKDMPOB_00198 9e-76 XK27_08585 S Psort location CytoplasmicMembrane, score
APKDMPOB_00199 2.1e-71 fnt P Formate nitrite transporter
APKDMPOB_00201 1.3e-221 XK27_09615 C reductase
APKDMPOB_00202 2.6e-104 XK27_09620 S reductase
APKDMPOB_00203 3.8e-78 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
APKDMPOB_00204 4.7e-219 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
APKDMPOB_00205 1.1e-36 WQ51_05710 S Mitochondrial biogenesis AIM24
APKDMPOB_00206 1.5e-39 WQ51_05710 S Mitochondrial biogenesis AIM24
APKDMPOB_00207 1.3e-87 cah 4.2.1.1 P Reversible hydration of carbon dioxide
APKDMPOB_00208 1.4e-234 L Transposase
APKDMPOB_00209 4.6e-50 S Protein of unknown function (DUF3397)
APKDMPOB_00210 3.1e-69 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
APKDMPOB_00211 5.3e-119 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
APKDMPOB_00212 3.9e-33 amiA E ABC transporter, substrate-binding protein, family 5
APKDMPOB_00213 3.8e-81 amiA E ABC transporter, substrate-binding protein, family 5
APKDMPOB_00214 2.1e-25 amiA E transmembrane transport
APKDMPOB_00215 1e-100 amiA E ABC transporter, substrate-binding protein, family 5
APKDMPOB_00216 3.8e-268 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
APKDMPOB_00217 2.9e-229 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
APKDMPOB_00218 8.6e-262 argH 4.3.2.1 E Argininosuccinate lyase
APKDMPOB_00219 2.9e-54 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
APKDMPOB_00220 1.3e-137 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
APKDMPOB_00221 2.5e-181 jag S RNA-binding protein
APKDMPOB_00223 1.6e-81 S Replication initiator protein A
APKDMPOB_00225 2.7e-12
APKDMPOB_00226 1.6e-18 MU outer membrane autotransporter barrel domain protein
APKDMPOB_00227 0.0 D Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
APKDMPOB_00228 8.9e-15
APKDMPOB_00229 3.1e-24
APKDMPOB_00230 6.7e-91
APKDMPOB_00231 1.6e-42 S PrgI family protein
APKDMPOB_00232 0.0 U Psort location Cytoplasmic, score
APKDMPOB_00233 0.0 M CHAP domain protein
APKDMPOB_00234 2.1e-103
APKDMPOB_00235 1.8e-63 ssb L single-stranded DNA binding
APKDMPOB_00237 5.7e-56
APKDMPOB_00238 5.6e-46 S Protein of unknown function (DUF3801)
APKDMPOB_00239 0.0 U An automated process has identified a potential problem with this gene model
APKDMPOB_00242 0.0 topB 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
APKDMPOB_00244 0.0 2.1.1.72, 3.1.21.3 L Psort location Cytoplasmic, score
APKDMPOB_00246 1.3e-26 S Bacterial mobilisation protein (MobC)
APKDMPOB_00247 3.5e-278 U relaxase
APKDMPOB_00249 1.8e-75 tnpR L Resolvase, N terminal domain
APKDMPOB_00251 2e-146 D CobQ CobB MinD ParA nucleotide binding domain protein
APKDMPOB_00253 1.9e-107 S Fic/DOC family
APKDMPOB_00254 1.3e-259 S PFAM Uncharacterised protein family UPF0236
APKDMPOB_00255 1e-13 rpmH J Ribosomal protein L34
APKDMPOB_00256 3.1e-225 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
APKDMPOB_00260 1.4e-231 L Transposase
APKDMPOB_00261 2.2e-54 bta 1.8.1.8 CO cell redox homeostasis
APKDMPOB_00263 7.8e-143 S Macro domain protein
APKDMPOB_00264 1.1e-50 trxA O Belongs to the thioredoxin family
APKDMPOB_00265 2.1e-73 yccU S CoA-binding protein
APKDMPOB_00266 4.1e-144 tatD L Hydrolase, tatd
APKDMPOB_00267 3.2e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
APKDMPOB_00268 4.6e-152 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
APKDMPOB_00270 3.9e-159 rsgA 3.1.3.100 G One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
APKDMPOB_00271 3e-119 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
APKDMPOB_00272 1.6e-117 thiN 2.7.6.2 H thiamine pyrophosphokinase
APKDMPOB_00273 5.5e-170 rmuC S RmuC domain protein
APKDMPOB_00274 1.8e-173 cbf S 3'-5' exoribonuclease yhaM
APKDMPOB_00275 1.3e-140 purR 2.4.2.7 F operon repressor
APKDMPOB_00276 7.7e-65 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
APKDMPOB_00277 4.3e-80 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
APKDMPOB_00278 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
APKDMPOB_00279 1.1e-186 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
APKDMPOB_00280 3.9e-75 L COG3547 Transposase and inactivated derivatives
APKDMPOB_00281 3.4e-68 L transposase IS116 IS110 IS902 family
APKDMPOB_00282 1.8e-22 L Transposase IS116 IS110 IS902
APKDMPOB_00283 1.1e-23 L Transposase
APKDMPOB_00284 1.6e-219 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
APKDMPOB_00285 3e-94 L Transposase
APKDMPOB_00286 3.6e-224 L Transposase
APKDMPOB_00287 2.3e-87 S Fusaric acid resistance protein-like
APKDMPOB_00288 8.5e-63 glnR K Transcriptional regulator
APKDMPOB_00289 4.9e-262 glnA 6.3.1.2 E glutamine synthetase
APKDMPOB_00290 2.4e-41 pscB M CHAP domain protein
APKDMPOB_00291 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
APKDMPOB_00292 2.5e-33 ykzG S Belongs to the UPF0356 family
APKDMPOB_00293 2.1e-120 yeaZ 2.3.1.234 O COG1214, inactive homolog of metal-dependent proteases
APKDMPOB_00294 1.3e-73 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
APKDMPOB_00295 2.8e-185 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
APKDMPOB_00296 3e-114 azlC E AzlC protein
APKDMPOB_00297 6.3e-46 azlD E branched-chain amino acid
APKDMPOB_00298 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
APKDMPOB_00299 6.9e-110 lepB 3.4.21.89 U Belongs to the peptidase S26 family
APKDMPOB_00300 3.4e-158 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
APKDMPOB_00301 2.3e-13 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
APKDMPOB_00302 6.7e-93 cvpA S toxin biosynthetic process
APKDMPOB_00303 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
APKDMPOB_00304 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
APKDMPOB_00307 3.6e-229 mutY L A G-specific adenine glycosylase
APKDMPOB_00308 2.8e-41 XK27_05745
APKDMPOB_00309 3.9e-47 rpsF J Binds together with S18 to 16S ribosomal RNA
APKDMPOB_00310 1e-90 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
APKDMPOB_00311 9.7e-36 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
APKDMPOB_00313 1.3e-122 XK27_01040 S Pfam PF06570
APKDMPOB_00314 1.3e-165 corA P COG0598 Mg2 and Co2 transporters
APKDMPOB_00315 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
APKDMPOB_00320 2.6e-44 V 'abc transporter, ATP-binding protein
APKDMPOB_00321 3.1e-57 V 'abc transporter, ATP-binding protein
APKDMPOB_00323 1.5e-192 pepP 3.4.11.9, 3.4.13.9 E Belongs to the peptidase M24B family
APKDMPOB_00324 3.7e-84 comEB 3.5.4.12 F ComE operon protein 2
APKDMPOB_00325 9.3e-98 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
APKDMPOB_00326 3.4e-62 yqhY S protein conserved in bacteria
APKDMPOB_00327 2.1e-73 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
APKDMPOB_00328 6.4e-179 scrR K Transcriptional
APKDMPOB_00329 2.7e-290 scrB 3.2.1.26 GH32 G invertase
APKDMPOB_00330 0.0 scrA 2.7.1.211 G pts system
APKDMPOB_00331 2.9e-170 scrK 2.7.1.2, 2.7.1.4 GK Fructokinase
APKDMPOB_00332 2.6e-129 manA 5.3.1.8 G mannose-6-phosphate isomerase
APKDMPOB_00333 3.6e-44 manA 5.3.1.8 G mannose-6-phosphate isomerase
APKDMPOB_00335 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
APKDMPOB_00336 1.6e-196 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
APKDMPOB_00337 1.2e-196 aroF 2.5.1.54 E Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
APKDMPOB_00338 5.9e-61 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
APKDMPOB_00339 1.2e-184 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
APKDMPOB_00340 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
APKDMPOB_00341 1.5e-172 ansA 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
APKDMPOB_00342 6.9e-251 XK27_03190 S hydrolases of the HAD superfamily
APKDMPOB_00343 7.9e-16 yebC M Membrane
APKDMPOB_00344 3.7e-13 yebC M Membrane
APKDMPOB_00345 3.6e-61 yebC M Membrane
APKDMPOB_00346 1e-16 KT response to antibiotic
APKDMPOB_00347 1.4e-30 KT response to antibiotic
APKDMPOB_00348 1.2e-30 KT response to antibiotic
APKDMPOB_00350 2.3e-79 liaI S membrane
APKDMPOB_00351 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
APKDMPOB_00352 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
APKDMPOB_00353 1.7e-107 S Protein of unknown function (DUF554)
APKDMPOB_00354 3.7e-131 ecsA_2 V abc transporter atp-binding protein
APKDMPOB_00355 8.6e-274 XK27_00765
APKDMPOB_00356 4.5e-138 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
APKDMPOB_00357 5.8e-225 proA 1.2.1.41 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
APKDMPOB_00358 3.6e-16 D nuclear chromosome segregation
APKDMPOB_00359 1.5e-222 L Transposase
APKDMPOB_00360 3.1e-30 yhaI J Protein of unknown function (DUF805)
APKDMPOB_00361 1.2e-30
APKDMPOB_00362 7.4e-27
APKDMPOB_00363 1.6e-65
APKDMPOB_00364 3e-157 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
APKDMPOB_00365 4.3e-47 ftsL D cell division protein FtsL
APKDMPOB_00366 0.0 ftsI 3.4.16.4 M penicillin-binding protein
APKDMPOB_00367 7e-184 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
APKDMPOB_00368 4.2e-221 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
APKDMPOB_00370 1.1e-267 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
APKDMPOB_00371 2.4e-66 yutD J protein conserved in bacteria
APKDMPOB_00372 2.5e-222 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
APKDMPOB_00373 5e-93 XK27_09885 V Glycopeptide antibiotics resistance protein
APKDMPOB_00375 0.0 mdlA V abc transporter atp-binding protein
APKDMPOB_00376 0.0 mdlB V abc transporter atp-binding protein
APKDMPOB_00377 0.0 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
APKDMPOB_00378 4.7e-236 mesE M Transport protein ComB
APKDMPOB_00380 6e-236 blpH 2.7.13.3 T protein histidine kinase activity
APKDMPOB_00381 2.1e-134 agrA KT phosphorelay signal transduction system
APKDMPOB_00384 6.7e-26 S Bacteriocin class II with double-glycine leader peptide
APKDMPOB_00393 9.5e-140 blpT
APKDMPOB_00394 3e-47 spiA K sequence-specific DNA binding
APKDMPOB_00397 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
APKDMPOB_00398 2.3e-164 gla U Belongs to the MIP aquaporin (TC 1.A.8) family
APKDMPOB_00399 1.1e-74 cppA E CppA N-terminal
APKDMPOB_00400 2.7e-55 cppA E CppA N-terminal
APKDMPOB_00401 1.7e-184 ampC V COG1680 Beta-lactamase class C and other penicillin binding proteins
APKDMPOB_00402 4.8e-32
APKDMPOB_00403 4e-116 ybbL S abc transporter atp-binding protein
APKDMPOB_00404 3.4e-127 ybbM S transport system, permease component
APKDMPOB_00405 7.2e-52 S DUF218 domain
APKDMPOB_00406 1.1e-41 2.1.1.72, 3.1.21.3, 3.1.21.4 L Eco57I restriction-modification methylase
APKDMPOB_00407 5.2e-165 P CorA-like Mg2+ transporter protein
APKDMPOB_00408 2.4e-14 P nitric oxide dioxygenase activity
APKDMPOB_00409 3.5e-69 S Pyrimidine dimer DNA glycosylase
APKDMPOB_00410 1.3e-153 L Integrase core domain protein
APKDMPOB_00411 7.8e-40 L Transposase
APKDMPOB_00412 1.1e-83 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
APKDMPOB_00413 8.4e-75 cah 4.2.1.1 P carbonic anhydrase
APKDMPOB_00414 0.0 pflB 2.3.1.54 C formate acetyltransferase'
APKDMPOB_00415 7.5e-200 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
APKDMPOB_00418 4.1e-150 yxeM ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
APKDMPOB_00419 2.8e-160 yxeN P ABC transporter (Permease
APKDMPOB_00420 5.5e-130 tcyN 3.6.3.21 E abc transporter atp-binding protein
APKDMPOB_00421 1.6e-08 S Protein of unknown function (DUF4059)
APKDMPOB_00422 2.8e-168 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
APKDMPOB_00423 4.8e-91 rsmD 2.1.1.171 L Methyltransferase
APKDMPOB_00424 5.6e-86 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
APKDMPOB_00425 1.1e-192 ylbL T Belongs to the peptidase S16 family
APKDMPOB_00426 2.2e-174 L Transposase
APKDMPOB_00427 1.2e-42
APKDMPOB_00428 1.4e-183 yhcC S radical SAM protein
APKDMPOB_00429 1.4e-98 ytqB 2.1.1.176 J (SAM)-dependent
APKDMPOB_00431 0.0 yjcE P NhaP-type Na H and K H antiporters
APKDMPOB_00432 3e-142 modF 3.6.3.21, 3.6.3.34 P abc transporter atp-binding protein
APKDMPOB_00433 3.5e-236 hlyX S COG1253 Hemolysins and related proteins containing CBS domains
APKDMPOB_00434 3.9e-223 L Transposase
APKDMPOB_00435 4.4e-149 pflA 1.97.1.4 C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
APKDMPOB_00437 2.4e-75 XK27_03180 T universal stress protein
APKDMPOB_00438 5.8e-238 alaA 2.6.1.2, 2.6.1.66 E Aminotransferase
APKDMPOB_00439 3.8e-137 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
APKDMPOB_00440 2.7e-97 pncA Q isochorismatase
APKDMPOB_00441 2.4e-153 hlpA M Belongs to the NlpA lipoprotein family
APKDMPOB_00442 1.6e-96 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
APKDMPOB_00443 4.9e-23 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
APKDMPOB_00444 6.2e-52 ascB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
APKDMPOB_00445 1.7e-24 2.4.1.52 GT4 M transferase activity, transferring glycosyl groups
APKDMPOB_00446 1.4e-47 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
APKDMPOB_00447 1.3e-268 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
APKDMPOB_00448 8.1e-271 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
APKDMPOB_00449 8.8e-32
APKDMPOB_00450 4e-146 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
APKDMPOB_00451 2.6e-97 yqeG S hydrolase of the HAD superfamily
APKDMPOB_00452 1.7e-215 yqeH S in Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
APKDMPOB_00453 5.9e-49 yhbY J RNA-binding protein
APKDMPOB_00454 4.5e-117 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
APKDMPOB_00455 2.9e-105 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
APKDMPOB_00456 1.3e-57 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
APKDMPOB_00457 3.2e-138 yqeM Q Methyltransferase domain protein
APKDMPOB_00458 2e-197 ylbM S Belongs to the UPF0348 family
APKDMPOB_00459 0.0 clpL O ATP-dependent Clp protease ATP-binding subunit
APKDMPOB_00460 7.9e-224 L Transposase
APKDMPOB_00462 4.7e-53
APKDMPOB_00463 7.5e-55 S CD20-like family
APKDMPOB_00464 1.3e-11
APKDMPOB_00465 8.6e-72 hit FG Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
APKDMPOB_00466 9.9e-132 ecsA V abc transporter atp-binding protein
APKDMPOB_00467 2.8e-180 ecsB U ABC transporter
APKDMPOB_00468 1.2e-151 ytmP 2.7.1.89 M Phosphotransferase
APKDMPOB_00469 1.3e-119 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
APKDMPOB_00471 1.7e-226 ytfP S Flavoprotein
APKDMPOB_00472 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
APKDMPOB_00473 7.4e-64 XK27_02560 S cog cog2151
APKDMPOB_00474 7.2e-39 WQ51_02910 S Protein of unknown function, DUF536
APKDMPOB_00475 7e-104 dnaQ 2.7.7.7 L DNA polymerase III
APKDMPOB_00476 2.3e-128 K transcriptional regulator, MerR family
APKDMPOB_00477 8.2e-28 L transposase activity
APKDMPOB_00479 7e-32 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
APKDMPOB_00480 8.1e-28
APKDMPOB_00481 0.0 ctpE P E1-E2 ATPase
APKDMPOB_00482 6.7e-36 pchB 2.5.1.19, 4.2.1.10, 4.2.99.21, 5.4.99.5 E Chorismate mutase
APKDMPOB_00483 8.5e-254 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
APKDMPOB_00484 8e-105 trpG 2.4.2.18, 2.6.1.85, 4.1.3.27 EH anthranilate
APKDMPOB_00485 7.8e-180 trpD 2.4.2.18, 4.1.3.27 F Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
APKDMPOB_00486 2.7e-132 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
APKDMPOB_00487 3e-99 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E belongs to the TrpF family
APKDMPOB_00488 1.7e-229 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
APKDMPOB_00489 2.5e-141 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
APKDMPOB_00490 2.6e-71 copY K Copper transport repressor, CopY TcrY family
APKDMPOB_00491 0.0 copA 3.6.3.54 P P-type ATPase
APKDMPOB_00492 1e-30 copZ 2.7.7.77 P Heavy metal-associated domain protein
APKDMPOB_00493 1e-190 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
APKDMPOB_00494 1.2e-112 papP P ABC transporter (Permease
APKDMPOB_00495 7.8e-107 P ABC transporter (Permease
APKDMPOB_00496 2.9e-134 glnQ 3.6.3.21 E abc transporter atp-binding protein
APKDMPOB_00497 1.1e-155 cjaA ET ABC transporter substrate-binding protein
APKDMPOB_00500 2.4e-256 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
APKDMPOB_00501 1.3e-105 ywaF S Integral membrane protein (intg_mem_TP0381)
APKDMPOB_00502 2.2e-298 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
APKDMPOB_00503 1.4e-96 thiT S Thiamine transporter
APKDMPOB_00504 1.9e-62 yjqA S Bacterial PH domain
APKDMPOB_00505 5.3e-151 corA P CorA-like protein
APKDMPOB_00506 4.1e-244 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
APKDMPOB_00507 4.4e-37 yazA L endonuclease containing a URI domain
APKDMPOB_00508 8.7e-139 yabB 2.1.1.223 L Methyltransferase
APKDMPOB_00509 1.8e-96 nodB3 G Polysaccharide deacetylase
APKDMPOB_00510 1.5e-11 nodB3 G Polysaccharide deacetylase
APKDMPOB_00511 1.5e-138 plsC 2.3.1.51 I Acyltransferase
APKDMPOB_00512 1.5e-97 comEA L COG1555 DNA uptake protein and related DNA-binding proteins
APKDMPOB_00513 0.0 comEC S Competence protein ComEC
APKDMPOB_00514 3.6e-230 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
APKDMPOB_00515 5.3e-46 XK27_07830 2.3.1.128 J Acetyltransferase GNAT Family
APKDMPOB_00516 4.4e-36 XK27_07830 2.3.1.128 J Acetyltransferase GNAT Family
APKDMPOB_00517 1.1e-229 ytoI K transcriptional regulator containing CBS domains
APKDMPOB_00518 7.2e-166 map 3.4.11.18 E Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed
APKDMPOB_00519 2.7e-158 rbn E Belongs to the UPF0761 family
APKDMPOB_00520 1.1e-84 ccl S cog cog4708
APKDMPOB_00521 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
APKDMPOB_00522 1.4e-184 yegS 2.7.1.107 I Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
APKDMPOB_00523 3.8e-119 ribD 1.1.1.193, 3.5.4.26 L Transposase DDE domain
APKDMPOB_00524 2.1e-74 S QueT transporter
APKDMPOB_00525 1e-156 xth 3.1.11.2 L exodeoxyribonuclease III
APKDMPOB_00526 3.2e-150 tehB 2.1.1.265 PQ tellurite resistance protein tehb
APKDMPOB_00527 2.4e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
APKDMPOB_00528 4.1e-37 ylqC L Belongs to the UPF0109 family
APKDMPOB_00529 9.4e-239 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
APKDMPOB_00530 0.0 ydaO E amino acid
APKDMPOB_00531 8.5e-99 folE 3.5.4.16 F gtp cyclohydrolase
APKDMPOB_00532 7e-147 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
APKDMPOB_00533 3e-297 amy 3.2.1.1 GH13 G Belongs to the glycosyl hydrolase 13 family
APKDMPOB_00534 1.2e-61 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
APKDMPOB_00535 2.8e-82 folK 2.7.6.3, 4.1.2.25 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
APKDMPOB_00536 2.1e-168 murB 1.3.1.98 M cell wall formation
APKDMPOB_00537 1.2e-213 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
APKDMPOB_00538 1.4e-139 potB P ABC-type spermidine putrescine transport system, permease component I
APKDMPOB_00539 2.8e-132 potC P ABC-type spermidine putrescine transport system, permease component II
APKDMPOB_00540 5e-201 potD P spermidine putrescine ABC transporter
APKDMPOB_00541 2.4e-86 XK27_08050 O HflC and HflK could regulate a protease
APKDMPOB_00542 5.3e-71 gloA 4.4.1.5 E Lactoylglutathione lyase
APKDMPOB_00543 1.2e-21 GK ROK family
APKDMPOB_00544 8.9e-116 GK ROK family
APKDMPOB_00545 1.3e-209 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
APKDMPOB_00546 1.3e-104 wecD M Acetyltransferase (GNAT) domain
APKDMPOB_00547 5e-218 serA 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
APKDMPOB_00548 8.1e-39 ogt 2.1.1.63, 3.2.2.20 L methylated-DNA-[protein]-cysteine S-methyltransferase activity
APKDMPOB_00549 6.4e-60 arsC 1.20.4.1 P Belongs to the ArsC family
APKDMPOB_00551 3.4e-51 lrgA S Effector of murein hydrolase LrgA
APKDMPOB_00552 1.5e-116 lrgB M effector of murein hydrolase
APKDMPOB_00553 2.6e-109 3.1.3.18 S IA, variant 1
APKDMPOB_00554 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
APKDMPOB_00555 2.1e-265 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
APKDMPOB_00556 2.6e-112 serB 3.1.3.3 E phosphoserine phosphatase
APKDMPOB_00557 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
APKDMPOB_00558 4.6e-160 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
APKDMPOB_00559 2.7e-52 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
APKDMPOB_00560 7.3e-110 csn2 S CRISPR-associated protein (Cas_Csn2)
APKDMPOB_00562 3.2e-153 EG Permeases of the drug metabolite transporter (DMT) superfamily
APKDMPOB_00563 1.6e-12 paaI Q protein possibly involved in aromatic compounds catabolism
APKDMPOB_00564 2.7e-29 paaI Q protein possibly involved in aromatic compounds catabolism
APKDMPOB_00567 4.4e-132 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
APKDMPOB_00569 4.5e-244 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
APKDMPOB_00570 1.1e-16 XK27_00735
APKDMPOB_00571 6.3e-134 glnQ 3.6.3.21 E abc transporter atp-binding protein
APKDMPOB_00572 0.0 glnP P ABC-type amino acid transport signal transduction systems periplasmic component domain
APKDMPOB_00573 5.6e-21 S CAAX amino terminal protease family protein
APKDMPOB_00575 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
APKDMPOB_00576 8.3e-84 mutT 3.6.1.55 F Nudix family
APKDMPOB_00577 1.4e-234 L Transposase
APKDMPOB_00578 1.7e-137 ET Belongs to the bacterial solute-binding protein 3 family
APKDMPOB_00579 2.3e-134 ET ABC transporter
APKDMPOB_00580 5.8e-200 arcT 2.6.1.1 E Aminotransferase
APKDMPOB_00581 4.2e-136 gltS ET Belongs to the bacterial solute-binding protein 3 family
APKDMPOB_00582 7.8e-26 rpsU J Belongs to the bacterial ribosomal protein bS21 family
APKDMPOB_00583 3.3e-46 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
APKDMPOB_00584 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
APKDMPOB_00585 7.5e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
APKDMPOB_00586 4.5e-55 yitW K metal-sulfur cluster biosynthetic enzyme
APKDMPOB_00587 1.7e-168 yfdH GT2 M COG0463, glycosyltransferases involved in cell wall biogenesis
APKDMPOB_00588 1.1e-231 S Predicted membrane protein (DUF2142)
APKDMPOB_00589 5.8e-160 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
APKDMPOB_00590 2.4e-218 amrA S membrane protein involved in the export of O-antigen and teichoic acid
APKDMPOB_00591 6e-185 S Glycosyltransferase like family 2
APKDMPOB_00592 9.5e-183 cpsIaJ S Glycosyltransferase like family 2
APKDMPOB_00593 2e-129 arnC M group 2 family protein
APKDMPOB_00594 4.6e-42 S Uncharacterized conserved protein (DUF2304)
APKDMPOB_00595 5.3e-152 2.4.1.60 S Glycosyltransferase group 2 family protein
APKDMPOB_00596 9.1e-33 S Psort location CytoplasmicMembrane, score
APKDMPOB_00597 6.2e-17 S Psort location CytoplasmicMembrane, score
APKDMPOB_00598 0.0 rgpF GT2,GT4 M Glycosyltransferase like family 2
APKDMPOB_00599 1.2e-217 M Psort location CytoplasmicMembrane, score
APKDMPOB_00600 2.1e-219 GT4 M transferase activity, transferring glycosyl groups
APKDMPOB_00601 2.4e-33 S Glucosyl transferase GtrII
APKDMPOB_00602 4.6e-189 S Glucosyl transferase GtrII
APKDMPOB_00603 9.5e-222 rgpA GT4 M Domain of unknown function (DUF1972)
APKDMPOB_00604 2.4e-170 rgpB GT2 M Glycosyltransferase, group 2 family protein
APKDMPOB_00605 6.4e-140 rgpC GM Transport permease protein
APKDMPOB_00606 8.4e-221 rgpD 3.6.3.38 P Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
APKDMPOB_00607 1.9e-271 rgpF M Rhamnan synthesis protein F
APKDMPOB_00608 6.2e-120 radC E Belongs to the UPF0758 family
APKDMPOB_00609 1.7e-128 puuD T peptidase C26
APKDMPOB_00610 1.4e-116 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
APKDMPOB_00611 3.1e-59 XK27_04120 S Putative amino acid metabolism
APKDMPOB_00612 3.2e-206 iscS 2.8.1.7 E Cysteine desulfurase
APKDMPOB_00613 1.2e-177 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
APKDMPOB_00614 5.8e-103 yjbK S Adenylate cyclase
APKDMPOB_00615 7.4e-118 yjbM 2.7.6.5 S Gtp pyrophosphokinase
APKDMPOB_00616 8.3e-151 nadK 2.7.1.23 H Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
APKDMPOB_00617 2.8e-173 rluD 5.4.99.23, 5.4.99.28, 5.4.99.29 J Responsible for synthesis of pseudouridine from uracil
APKDMPOB_00618 2.9e-179 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
APKDMPOB_00619 6.1e-89 L Transposase
APKDMPOB_00620 2.7e-28 L transposition
APKDMPOB_00621 3.8e-67 L PFAM Integrase catalytic region
APKDMPOB_00622 9.9e-214 oxlT P COG0477 Permeases of the major facilitator superfamily
APKDMPOB_00623 1.4e-40 tatD L Hydrolase, tatd
APKDMPOB_00624 8.5e-21 oppF P Belongs to the ABC transporter superfamily
APKDMPOB_00625 1.2e-24 oppF P Belongs to the ABC transporter superfamily
APKDMPOB_00626 0.0 amiA E ABC transporter, substrate-binding protein, family 5
APKDMPOB_00627 5.1e-268 amiC P ABC transporter (Permease
APKDMPOB_00628 1.2e-166 amiD P ABC transporter (Permease
APKDMPOB_00629 7.9e-202 oppD P Belongs to the ABC transporter superfamily
APKDMPOB_00630 8e-171 oppF P Belongs to the ABC transporter superfamily
APKDMPOB_00631 1.1e-123 V ATPase activity
APKDMPOB_00632 3.8e-117 skfE V abc transporter atp-binding protein
APKDMPOB_00633 8.6e-63 yvoA_1 K Transcriptional
APKDMPOB_00634 2.5e-144 supH S overlaps another CDS with the same product name
APKDMPOB_00635 6.6e-145 XK27_02985 S overlaps another CDS with the same product name
APKDMPOB_00636 8.8e-214 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
APKDMPOB_00637 2.2e-111 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
APKDMPOB_00638 8.8e-45 rpoZ 2.7.7.6 K DNA-directed 5'-3' RNA polymerase activity
APKDMPOB_00639 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
APKDMPOB_00640 1.3e-173 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
APKDMPOB_00641 5e-243 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
APKDMPOB_00642 1.3e-128 stp 3.1.3.16 T phosphatase
APKDMPOB_00643 1.8e-294 prkC 2.7.11.1 KLT serine threonine protein kinase
APKDMPOB_00644 4.5e-118 yvqF KT membrane
APKDMPOB_00645 1.7e-174 vraS 2.7.13.3 T Histidine kinase
APKDMPOB_00646 1.8e-113 vraR K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
APKDMPOB_00649 5.8e-94 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
APKDMPOB_00650 5.7e-132 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
APKDMPOB_00651 2.5e-186 trxB1 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
APKDMPOB_00652 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
APKDMPOB_00653 1.3e-52 L Transposase
APKDMPOB_00654 2.6e-78 L Transposase
APKDMPOB_00655 0.0 gshF 6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
APKDMPOB_00656 1.5e-290 V abc transporter atp-binding protein
APKDMPOB_00657 0.0 V abc transporter atp-binding protein
APKDMPOB_00658 1.9e-16 rtxA M M26 IgA1-specific Metallo-endopeptidase C-terminal region
APKDMPOB_00659 9.2e-229 zmpB M M26 IgA1-specific Metallo-endopeptidase C-terminal region
APKDMPOB_00660 1.4e-234 L Transposase
APKDMPOB_00661 7.1e-09 L Integrase core domain protein
APKDMPOB_00662 6.8e-184 galR K Transcriptional regulator
APKDMPOB_00663 5.6e-214 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
APKDMPOB_00664 3.5e-285 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
APKDMPOB_00665 1.6e-193 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
APKDMPOB_00666 3.3e-197 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
APKDMPOB_00667 0.0 lacS G transporter
APKDMPOB_00668 0.0 lacL 3.2.1.23 G -beta-galactosidase
APKDMPOB_00669 4.2e-228 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
APKDMPOB_00670 0.0 sbcC L ATPase involved in DNA repair
APKDMPOB_00671 3.4e-32
APKDMPOB_00672 3.4e-154 L Integrase core domain protein
APKDMPOB_00673 7.8e-40 L Transposase
APKDMPOB_00674 9e-50 dlpA 1.1.1.85 CE Tartrate dehydrogenase
APKDMPOB_00675 7.7e-123 dlpA H Methyltransferase
APKDMPOB_00676 1.2e-152 S metal-dependent hydrolase with the TIM-barrel fold
APKDMPOB_00677 1.2e-71 2.7.7.12 C Domain of unknown function (DUF4931)
APKDMPOB_00678 6.3e-160 yrdR EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
APKDMPOB_00679 1.7e-44 K helix_turn_helix, Arsenical Resistance Operon Repressor
APKDMPOB_00680 8.2e-89 L overlaps another CDS with the same product name
APKDMPOB_00681 2.3e-109 L Transposase
APKDMPOB_00682 8.5e-46
APKDMPOB_00683 2.2e-51
APKDMPOB_00684 7.9e-18 L Integrase core domain
APKDMPOB_00685 5.4e-116 devA 3.6.3.25 V abc transporter atp-binding protein
APKDMPOB_00686 1.6e-159 hrtB V MacB-like periplasmic core domain
APKDMPOB_00687 0.0 M family 8
APKDMPOB_00688 3e-08
APKDMPOB_00689 9.9e-109 MA20_06410 E LysE type translocator
APKDMPOB_00690 4.1e-37 IQ PFAM AMP-dependent synthetase and ligase
APKDMPOB_00691 1.7e-112
APKDMPOB_00693 1.6e-68 S Signal peptide protein, YSIRK family
APKDMPOB_00694 2e-53 K response regulator
APKDMPOB_00695 1.3e-36 BP1961 P nitric oxide dioxygenase activity
APKDMPOB_00697 1.6e-277 XK27_07020 S Belongs to the UPF0371 family
APKDMPOB_00698 2.7e-123 2.1.1.72 V site-specific DNA-methyltransferase (adenine-specific) activity
APKDMPOB_00699 1.3e-111 L DEAD-like helicases superfamily
APKDMPOB_00700 0.0 L DEAD-like helicases superfamily
APKDMPOB_00701 3e-139 S Abortive infection C-terminus
APKDMPOB_00702 4.5e-08
APKDMPOB_00703 2.5e-100 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
APKDMPOB_00704 8.4e-159 yvgN C reductase
APKDMPOB_00705 8.1e-27 yoaK S Protein of unknown function (DUF1275)
APKDMPOB_00706 1.7e-52 yoaK S Protein of unknown function (DUF1275)
APKDMPOB_00707 1.1e-110 drgA C Nitroreductase
APKDMPOB_00708 1.4e-226 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
APKDMPOB_00709 3.7e-154 E Alpha/beta hydrolase of unknown function (DUF915)
APKDMPOB_00710 4.7e-76 ywnA K Transcriptional regulator
APKDMPOB_00711 8.3e-73 1.13.11.2 S glyoxalase
APKDMPOB_00712 5.1e-31 1.13.11.2 S glyoxalase
APKDMPOB_00713 1.6e-108 XK27_02070 S nitroreductase
APKDMPOB_00714 5.3e-75 yfnA E amino acid
APKDMPOB_00715 1.9e-143 yfnA E amino acid
APKDMPOB_00717 2.8e-25 csbD K CsbD-like
APKDMPOB_00718 8.7e-35 manA 5.3.1.8 G mannose-6-phosphate isomerase
APKDMPOB_00719 4.3e-234 brnQ E Component of the transport system for branched-chain amino acids
APKDMPOB_00720 2.3e-183 hipO E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
APKDMPOB_00722 2.3e-103 gldA 1.1.1.1, 1.1.1.6 C glycerol dehydrogenase
APKDMPOB_00723 1.6e-147 ykrV3 2.6.1.83 E mutations do not affect methionine salvage in vivo however
APKDMPOB_00724 3e-115 yxeQ S MmgE/PrpD family
APKDMPOB_00725 5.4e-58 yxeL K Acetyltransferase (GNAT) domain
APKDMPOB_00726 4.9e-64 yxeN U ABC transporter, permease protein
APKDMPOB_00727 9.5e-93 yxeO 3.6.3.21 E abc transporter atp-binding protein
APKDMPOB_00728 8.6e-198 pcaB 4.3.2.2 F Adenylosuccinate lyase
APKDMPOB_00729 2e-85 yxeM ET Belongs to the bacterial solute-binding protein 3 family
APKDMPOB_00730 1.3e-184 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
APKDMPOB_00731 6.5e-246 norM V Multidrug efflux pump
APKDMPOB_00732 8.3e-203 pbuX F xanthine permease
APKDMPOB_00733 9.2e-78 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
APKDMPOB_00734 9.2e-124 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
APKDMPOB_00735 2.2e-163 T Histidine kinase
APKDMPOB_00736 2.2e-134 macB2 V ABC transporter, ATP-binding protein
APKDMPOB_00737 0.0 V ABC transporter (permease)
APKDMPOB_00738 6e-99 XK27_05000 S Fe-S-cluster oxidoreductase
APKDMPOB_00739 1.5e-30 liaI KT membrane
APKDMPOB_00740 1.4e-15 liaI KT membrane
APKDMPOB_00741 6.1e-26 XK27_09825 V 'abc transporter, ATP-binding protein
APKDMPOB_00742 3.7e-122 S An automated process has identified a potential problem with this gene model
APKDMPOB_00744 4.6e-42 3.6.1.55 F NUDIX domain
APKDMPOB_00745 1.8e-151 mutR K Transcriptional activator, Rgg GadR MutR family
APKDMPOB_00746 0.0 2.7.7.73, 2.7.7.80 E metalloendopeptidase activity
APKDMPOB_00747 1.1e-210 EGP Major facilitator Superfamily
APKDMPOB_00751 8.7e-159 XK27_09825 V abc transporter atp-binding protein
APKDMPOB_00752 1.5e-132 yvfS V ABC-2 type transporter
APKDMPOB_00753 3.7e-191 desK 2.7.13.3 T Histidine kinase
APKDMPOB_00754 5.3e-99 desR K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
APKDMPOB_00755 1.9e-60 sdaAB 4.3.1.17 E L-serine dehydratase
APKDMPOB_00756 5e-309 hutU 4.2.1.49 E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
APKDMPOB_00757 1.5e-203 S Protein of unknown function (DUF917)
APKDMPOB_00758 1.4e-278 hutH 4.3.1.3 E Histidine ammonia-lyase
APKDMPOB_00759 3.3e-102 proWZ P ABC transporter (Permease
APKDMPOB_00760 6.9e-167 proX M ABC transporter, substrate-binding protein, QAT family
APKDMPOB_00761 1.8e-136 proV E abc transporter atp-binding protein
APKDMPOB_00762 5.2e-89 proW P Binding-protein-dependent transport system inner membrane component
APKDMPOB_00763 1.3e-62 bioY S biotin transmembrane transporter activity
APKDMPOB_00764 8.2e-115 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 E hydrolase
APKDMPOB_00765 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
APKDMPOB_00766 1.4e-278 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
APKDMPOB_00767 2.7e-50
APKDMPOB_00768 2.5e-12
APKDMPOB_00769 9.1e-92 pat 2.3.1.183 M acetyltransferase
APKDMPOB_00770 1.7e-78 alkD L Dna alkylation repair
APKDMPOB_00771 7.3e-200 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
APKDMPOB_00772 7.3e-172 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
APKDMPOB_00773 2.1e-123 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
APKDMPOB_00774 0.0 smc D Required for chromosome condensation and partitioning
APKDMPOB_00775 2.4e-195 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
APKDMPOB_00776 9.9e-94 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
APKDMPOB_00777 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
APKDMPOB_00780 3.5e-55 nrdD_1 1.1.98.6, 1.17.4.1 F Ribonucleoside-triphosphate reductase
APKDMPOB_00781 3.2e-239 XK27_08130 K Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
APKDMPOB_00783 9.7e-86 S ECF-type riboflavin transporter, S component
APKDMPOB_00784 2.7e-41 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
APKDMPOB_00785 9.3e-87 pdxK 2.7.1.35 H Belongs to the pyridoxine kinase family
APKDMPOB_00786 1.5e-11 XK27_01265 S ECF-type riboflavin transporter, S component
APKDMPOB_00787 1.3e-59 XK27_01265 S ECF-type riboflavin transporter, S component
APKDMPOB_00788 4e-292 yfmM S abc transporter atp-binding protein
APKDMPOB_00789 1.1e-253 noxE P NADH oxidase
APKDMPOB_00790 7.7e-180 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
APKDMPOB_00791 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
APKDMPOB_00792 1.7e-134 srtA 3.4.22.70 M Sortase (surface protein transpeptidase)
APKDMPOB_00793 3.4e-70 yaeR E COG0346 Lactoylglutathione lyase and related lyases
APKDMPOB_00794 1.1e-162 ypuA S secreted protein
APKDMPOB_00795 9e-24 L Transposase (IS116 IS110 IS902 family)
APKDMPOB_00796 3.7e-59 L PFAM transposase IS116 IS110 IS902 family
APKDMPOB_00798 1.5e-183 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
APKDMPOB_00799 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
APKDMPOB_00800 8.5e-34 nrdH O Glutaredoxin
APKDMPOB_00801 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
APKDMPOB_00802 3.3e-211 citZ 2.3.3.1 C Belongs to the citrate synthase family
APKDMPOB_00803 3e-223 icd 1.1.1.42 C Isocitrate dehydrogenase
APKDMPOB_00804 1.5e-37 ptsH G phosphocarrier protein Hpr
APKDMPOB_00805 2.4e-311 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
APKDMPOB_00806 4e-262 gapN 1.2.1.9 C Belongs to the aldehyde dehydrogenase family
APKDMPOB_00807 7.3e-27 XK27_05670 S Putative esterase
APKDMPOB_00808 2.6e-32 XK27_05670 S Putative esterase
APKDMPOB_00809 6.1e-36 XK27_05675 S Esterase
APKDMPOB_00810 4.8e-42 XK27_05675 S Esterase
APKDMPOB_00811 2.5e-50 XK27_05680 6.3.2.2, 6.3.2.4 M carbamoylphosphate synthase large subunit
APKDMPOB_00812 1.3e-108 XK27_05680 6.3.2.4 M carbamoylphosphate synthase large subunit
APKDMPOB_00813 7.1e-24 6.3.2.2, 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
APKDMPOB_00814 9.7e-176 yfmL 3.6.4.13 L DEAD DEAH box helicase
APKDMPOB_00815 5.2e-113 udk 2.7.1.48 F Cytidine monophosphokinase
APKDMPOB_00816 0.0 uup S abc transporter atp-binding protein
APKDMPOB_00818 1.8e-125 pip 1.11.1.10 S Alpha beta hydrolase
APKDMPOB_00819 0.0 mprF 2.3.2.3 J Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
APKDMPOB_00820 8.7e-150 cobQ S glutamine amidotransferase
APKDMPOB_00821 4.9e-254 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain protein
APKDMPOB_00822 1.7e-120 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
APKDMPOB_00823 1.5e-164 ybbR S Protein conserved in bacteria
APKDMPOB_00824 1.3e-249 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
APKDMPOB_00825 1.3e-70 gtrA S GtrA-like protein
APKDMPOB_00826 3.5e-123 trmK 2.1.1.217 S SAM-dependent methyltransferase
APKDMPOB_00827 1.4e-147 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
APKDMPOB_00828 9.1e-22 zupT P Mediates zinc uptake. May also transport other divalent cations
APKDMPOB_00829 2e-102 zupT P Mediates zinc uptake. May also transport other divalent cations
APKDMPOB_00830 9e-206 yurR 1.4.5.1 E oxidoreductase
APKDMPOB_00831 6e-160 rfbA 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
APKDMPOB_00832 2.4e-112 rmlC 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
APKDMPOB_00833 4.8e-204 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
APKDMPOB_00837 5.9e-216 hemN H Involved in the biosynthesis of porphyrin-containing compound
APKDMPOB_00838 8.5e-139 fat 3.1.2.21 I Acyl-ACP thioesterase
APKDMPOB_00839 7.2e-141 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
APKDMPOB_00840 1e-119 ylfI S tigr01906
APKDMPOB_00841 3.2e-138 hisK 3.1.3.15 E Histidinol phosphatase and related hydrolases of the PHP family
APKDMPOB_00842 8.7e-09 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
APKDMPOB_00843 1e-52 XK27_08080 3.1.1.53 G Exopolysaccharide biosynthesis protein
APKDMPOB_00844 1.1e-52 XK27_08085
APKDMPOB_00845 5.1e-27 L Transposase
APKDMPOB_00846 2.3e-31 L transposition
APKDMPOB_00847 1.5e-51 L Integrase core domain protein
APKDMPOB_00848 7.6e-194 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
APKDMPOB_00849 1.5e-183 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
APKDMPOB_00850 1.4e-116 hisG 2.4.2.17 E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
APKDMPOB_00851 2.1e-230 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
APKDMPOB_00852 9.7e-106 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
APKDMPOB_00853 4.4e-109 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
APKDMPOB_00854 9.4e-127 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
APKDMPOB_00855 2.4e-136 hisF 3.5.4.19, 3.6.1.31 E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
APKDMPOB_00856 2.1e-60 hisI 3.5.4.19, 3.5.4.25, 3.6.1.31, 5.3.1.16 E Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
APKDMPOB_00857 4.5e-49 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E phosphoribosyl-ATP diphosphatase activity
APKDMPOB_00858 1.4e-230 rodA D Belongs to the SEDS family
APKDMPOB_00859 9.2e-223 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
APKDMPOB_00860 4.2e-118 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
APKDMPOB_00861 1.3e-173 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
APKDMPOB_00862 1.3e-137 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
APKDMPOB_00863 0.0 recJ L Single-strand DNA-specific exonuclease, C terminal domain
APKDMPOB_00864 1.9e-92 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
APKDMPOB_00865 3.7e-179 metA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
APKDMPOB_00866 1.2e-123 dnaD
APKDMPOB_00867 1e-116 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
APKDMPOB_00869 1e-243 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
APKDMPOB_00870 3.5e-29 xseB 3.1.11.6 L exodeoxyribonuclease VII activity
APKDMPOB_00871 1.1e-153 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
APKDMPOB_00872 1.2e-152 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
APKDMPOB_00873 1.4e-72 argR K arginine binding
APKDMPOB_00874 6.7e-301 recN L May be involved in recombinational repair of damaged DNA
APKDMPOB_00875 4e-145 DegV S DegV family
APKDMPOB_00876 7.4e-142 ypmR E COG2755 Lysophospholipase L1 and related esterases
APKDMPOB_00877 3e-91 ypmS S Protein conserved in bacteria
APKDMPOB_00878 2.8e-39 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
APKDMPOB_00881 2.5e-180 pyrD 1.3.1.14, 1.3.98.1 F Catalyzes the conversion of dihydroorotate to orotate
APKDMPOB_00882 1.3e-128 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
APKDMPOB_00883 7.9e-288 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
APKDMPOB_00884 4.4e-186 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
APKDMPOB_00885 4.3e-269 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
APKDMPOB_00886 1.2e-111 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
APKDMPOB_00887 3e-150 sua5 2.7.7.87 J Belongs to the SUA5 family
APKDMPOB_00888 0.0 dnaE 2.7.7.7 L DNA polymerase
APKDMPOB_00889 6.3e-185 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
APKDMPOB_00890 1.9e-275 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
APKDMPOB_00891 1.2e-08 Q the current gene model (or a revised gene model) may contain a frame shift
APKDMPOB_00892 9.4e-14 Q the current gene model (or a revised gene model) may contain a frame shift
APKDMPOB_00893 9e-11 Q the current gene model (or a revised gene model) may contain a frame shift
APKDMPOB_00894 3.2e-17 S Domain of unknown function (DUF4649)
APKDMPOB_00895 1.7e-174 XK27_08835 S ABC transporter substrate binding protein
APKDMPOB_00896 1.7e-143 XK27_08840 S Belongs to the binding-protein-dependent transport system permease family
APKDMPOB_00897 4.2e-133 XK27_08845 S abc transporter atp-binding protein
APKDMPOB_00898 1.5e-305 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
APKDMPOB_00899 1.6e-151 estA CE1 S Putative esterase
APKDMPOB_00900 7.4e-124 XK27_08875 O Zinc-dependent metalloprotease
APKDMPOB_00901 3.6e-13 XK27_08880
APKDMPOB_00902 1e-75 fld C Flavodoxin
APKDMPOB_00903 4e-276 clcA P Chloride transporter, ClC family
APKDMPOB_00904 3.2e-35 pheA 1.3.1.12, 2.3.1.79, 4.2.1.51, 5.4.99.5 E Chorismate mutase
APKDMPOB_00905 1.5e-217 XK27_05110 P chloride
APKDMPOB_00906 8.5e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
APKDMPOB_00908 7.2e-20 WQ51_02665 S Protein of unknown function (DUF3042)
APKDMPOB_00909 5.6e-161 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
APKDMPOB_00910 6.7e-87 ytsP 1.8.4.14 T GAF domain-containing protein
APKDMPOB_00911 2.1e-291 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
APKDMPOB_00912 1e-173 birA 6.3.4.15 HK Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
APKDMPOB_00913 2.1e-203 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
APKDMPOB_00914 0.0 5.1.3.2 GM Psort location CytoplasmicMembrane, score
APKDMPOB_00915 5.7e-145
APKDMPOB_00916 0.0 S Uncharacterised protein conserved in bacteria (DUF2194)
APKDMPOB_00917 5.8e-274 pelF GT4 M Domain of unknown function (DUF3492)
APKDMPOB_00918 1.5e-184 pelG M Putative exopolysaccharide Exporter (EPS-E)
APKDMPOB_00919 1.4e-213 cotH M CotH kinase protein
APKDMPOB_00920 1.9e-46 P VTC domain
APKDMPOB_00921 3.5e-33 P VTC domain
APKDMPOB_00922 4.7e-131 G Domain of unknown function (DUF4832)
APKDMPOB_00923 8.7e-195 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
APKDMPOB_00925 4.1e-226 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
APKDMPOB_00926 1.2e-25 epuA S DNA-directed RNA polymerase subunit beta
APKDMPOB_00927 1.4e-145 endA F DNA RNA non-specific endonuclease
APKDMPOB_00928 1.5e-175 L Transposase
APKDMPOB_00929 2.4e-47 U response to pH
APKDMPOB_00930 2e-23 L Transposase for ISSha1
APKDMPOB_00931 2.7e-194 L Transposase
APKDMPOB_00932 1.5e-107 tcyB_2 P ABC transporter (permease)
APKDMPOB_00933 4.4e-113 gltJ P ABC transporter (Permease
APKDMPOB_00934 1.9e-147 peb1A ET ABC-type amino acid transport signal transduction systems, periplasmic component domain
APKDMPOB_00935 9e-136 glnQ 3.6.3.21 E abc transporter atp-binding protein
APKDMPOB_00936 1.2e-126 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
APKDMPOB_00937 1.9e-245 vicK 2.7.13.3 T Histidine kinase
APKDMPOB_00938 8.1e-151 vicX 3.1.26.11 S Metal-dependent hydrolases of the beta-lactamase superfamily I
APKDMPOB_00939 3.2e-34 F Protein of unknown function (DUF454)
APKDMPOB_00940 1.4e-228 murM 2.3.2.10, 2.3.2.16 V protein involved in methicillin resistance
APKDMPOB_00941 2e-146 yidA S hydrolases of the HAD superfamily
APKDMPOB_00942 2.9e-16 XK27_00115 2.3.1.128 K Acetyltransferase GNAT family
APKDMPOB_00943 4.1e-68 XK27_00115 2.3.1.128 K Acetyltransferase GNAT family
APKDMPOB_00944 2.6e-67 ywiB S Domain of unknown function (DUF1934)
APKDMPOB_00945 0.0 pacL 3.6.3.8 P cation transport ATPase
APKDMPOB_00946 2e-135 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
APKDMPOB_00947 1.3e-181 yjjH S Calcineurin-like phosphoesterase
APKDMPOB_00948 2.5e-200 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
APKDMPOB_00949 1.1e-181 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
APKDMPOB_00950 3.6e-123 ftsE D cell division ATP-binding protein FtsE
APKDMPOB_00951 1.1e-162 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
APKDMPOB_00952 4.3e-91 mutX 3.6.1.55 F NTP pyrophosphohydrolases including oxidative damage repair enzymes
APKDMPOB_00953 4.4e-174 yubA S permease
APKDMPOB_00954 4.5e-222 G COG0457 FOG TPR repeat
APKDMPOB_00955 4.8e-94 lepB 3.4.21.89 U Belongs to the peptidase S26 family
APKDMPOB_00956 2.3e-226 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
APKDMPOB_00957 5.1e-87 ebsA S Family of unknown function (DUF5322)
APKDMPOB_00958 8.1e-18 M LysM domain
APKDMPOB_00959 8.9e-119 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
APKDMPOB_00960 7.8e-86 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
APKDMPOB_00961 1.2e-26 rpmI J Belongs to the bacterial ribosomal protein bL35 family
APKDMPOB_00962 4.3e-56 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
APKDMPOB_00963 3e-71 XK27_03610 K Gnat family
APKDMPOB_00964 3.2e-26 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
APKDMPOB_00965 1.4e-272 pepV 3.5.1.18 E Dipeptidase
APKDMPOB_00966 4.8e-108 ung2 3.2.2.27 L Uracil-DNA glycosylase
APKDMPOB_00967 6.1e-22 V Glucan-binding protein C
APKDMPOB_00969 5.6e-121 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
APKDMPOB_00970 8.4e-237 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
APKDMPOB_00971 2.8e-41 S Protein of unknown function (DUF1697)
APKDMPOB_00972 1.2e-149 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
APKDMPOB_00973 3.5e-126 yfeJ 6.3.5.2 F glutamine amidotransferase
APKDMPOB_00974 9e-130 deoD 2.4.2.1, 2.4.2.28 F purine nucleoside phosphorylase
APKDMPOB_00975 8.5e-252 cps4A K Cell envelope-like function transcriptional attenuator common domain protein
APKDMPOB_00976 3e-136 cpsB 3.1.3.48 GM Capsular polysaccharide biosynthesis protein
APKDMPOB_00977 1.4e-106 cps4C M biosynthesis protein
APKDMPOB_00978 2e-116 cpsD D COG0489 ATPases involved in chromosome partitioning
APKDMPOB_00979 1.4e-234 L Transposase
APKDMPOB_00980 8.4e-94 V VanZ like family
APKDMPOB_00981 4.2e-10 supH 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
APKDMPOB_00982 7.6e-70 supH 3.1.3.102, 3.1.3.104 Q phosphatase activity
APKDMPOB_00983 3.7e-85 G Belongs to the phosphoglycerate mutase family
APKDMPOB_00984 6.5e-199 S hmm pf01594
APKDMPOB_00985 7.4e-18 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
APKDMPOB_00986 6.9e-98 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
APKDMPOB_00987 3.8e-43 bglH 3.2.1.86 GT1 G beta-glucosidase activity
APKDMPOB_00988 7.1e-36 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
APKDMPOB_00989 5.4e-38 S granule-associated protein
APKDMPOB_00990 2e-291 S unusual protein kinase
APKDMPOB_00991 4.6e-106 estA E Lysophospholipase L1 and related esterases
APKDMPOB_00992 1.3e-156 rssA S Phospholipase, patatin family
APKDMPOB_00993 1.6e-79 3.4.16.4 M Belongs to the peptidase S11 family
APKDMPOB_00994 7.6e-58 3.4.16.4 M Belongs to the peptidase S11 family
APKDMPOB_00995 2.5e-20 dacA1 3.4.16.4 M Belongs to the peptidase S11 family
APKDMPOB_00996 2e-18 dacA1 3.4.16.4 M Belongs to the peptidase S11 family
APKDMPOB_00997 2.1e-216 yeaB K Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
APKDMPOB_00998 3.8e-127 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
APKDMPOB_00999 9.1e-234 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
APKDMPOB_01000 0.0 S the current gene model (or a revised gene model) may contain a frame shift
APKDMPOB_01001 6.6e-184 acoA 1.2.4.1, 1.2.4.4 C Dehydrogenase E1 component
APKDMPOB_01002 1.1e-181 acoB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
APKDMPOB_01003 1.1e-197 acoC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
APKDMPOB_01004 0.0 lpdA 1.8.1.4 C Dehydrogenase
APKDMPOB_01005 3.8e-11 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
APKDMPOB_01006 2.7e-67 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
APKDMPOB_01007 1.3e-56 3.5.1.28 NU amidase activity
APKDMPOB_01008 8.4e-29 3.5.1.28 NU amidase activity
APKDMPOB_01009 2.3e-135 3.5.1.28 NU amidase activity
APKDMPOB_01010 3.4e-209 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
APKDMPOB_01011 2.3e-60 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
APKDMPOB_01012 1.3e-82 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
APKDMPOB_01013 3e-34 pulA 3.2.1.1, 3.2.1.41 CBM48,GH13 G belongs to the glycosyl hydrolase 13 family
APKDMPOB_01014 5.2e-165 yclN P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
APKDMPOB_01015 1.8e-165 fatC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
APKDMPOB_01016 1.2e-135 yclP 3.6.3.34 P abc transporter atp-binding protein
APKDMPOB_01017 5.1e-174 fatB P ABC-type enterochelin transport system, periplasmic component
APKDMPOB_01018 4.7e-11 msmX P Belongs to the ABC transporter superfamily
APKDMPOB_01019 9.9e-118 malG P ABC transporter (Permease
APKDMPOB_01020 1e-235 malF P ABC transporter (Permease
APKDMPOB_01021 2.2e-177 malX G ABC transporter
APKDMPOB_01022 1.4e-125 malR K Transcriptional regulator
APKDMPOB_01023 5.8e-272 malQ 2.4.1.25 GH77 G 4-alpha-glucanotransferase
APKDMPOB_01024 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
APKDMPOB_01025 2.6e-183 lplA 6.3.1.20 H Lipoate-protein ligase
APKDMPOB_01027 4.3e-192 xerS D Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division
APKDMPOB_01028 0.0 pepN 3.4.11.2 E aminopeptidase
APKDMPOB_01029 3.5e-112 phoU P Plays a role in the regulation of phosphate uptake
APKDMPOB_01030 9.6e-138 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
APKDMPOB_01031 1.2e-149 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
APKDMPOB_01032 5.5e-153 pstA P phosphate transport system permease
APKDMPOB_01033 5.5e-156 pstC P probably responsible for the translocation of the substrate across the membrane
APKDMPOB_01034 9.9e-155 pstS P phosphate
APKDMPOB_01035 1.8e-248 rsmF 2.1.1.176, 2.1.1.178 J NOL1 NOP2 sun family protein
APKDMPOB_01036 6.7e-131 suhB 3.1.3.25 G Belongs to the inositol monophosphatase superfamily
APKDMPOB_01037 2.1e-42 yktA S Belongs to the UPF0223 family
APKDMPOB_01038 3.1e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
APKDMPOB_01039 1e-170 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
APKDMPOB_01040 1.1e-147 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
APKDMPOB_01041 3.2e-229 XK27_04775 S hemerythrin HHE cation binding domain
APKDMPOB_01042 9.8e-33 M1-755 P Hemerythrin HHE cation binding domain protein
APKDMPOB_01043 1.3e-108 hsdS2 2.1.1.72 V Type I restriction modification DNA specificity domain
APKDMPOB_01044 1e-84 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
APKDMPOB_01045 4.3e-51 S haloacid dehalogenase-like hydrolase
APKDMPOB_01046 7e-234 metY 2.5.1.49 E o-acetylhomoserine
APKDMPOB_01047 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
APKDMPOB_01048 4.9e-238 agcS E (Alanine) symporter
APKDMPOB_01049 6.1e-244 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
APKDMPOB_01050 1e-22 bglC K Transcriptional regulator
APKDMPOB_01051 1.7e-18 yfiF3 K sequence-specific DNA binding
APKDMPOB_01052 1.1e-59 sasH 3.1.3.5, 3.6.1.45 F Belongs to the 5'-nucleotidase family
APKDMPOB_01053 5.5e-243 sasH 3.1.3.5, 3.6.1.45 F Belongs to the 5'-nucleotidase family
APKDMPOB_01055 3.5e-21 yecS P amino acid transport
APKDMPOB_01056 1.1e-66 yecS P ABC transporter (Permease
APKDMPOB_01057 2.7e-40 yckB ET Belongs to the bacterial solute-binding protein 3 family
APKDMPOB_01058 2.3e-153 nylA 3.5.1.4 J Belongs to the amidase family
APKDMPOB_01060 7.5e-112 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
APKDMPOB_01061 2.4e-127 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
APKDMPOB_01062 7.8e-117 csm6 S Psort location Cytoplasmic, score
APKDMPOB_01063 1.8e-51 csm6 S Psort location Cytoplasmic, score
APKDMPOB_01065 2e-138 2.7.13.3 T protein histidine kinase activity
APKDMPOB_01066 1.2e-132 agrA KT phosphorelay signal transduction system
APKDMPOB_01067 2.2e-25
APKDMPOB_01068 2.3e-134 blpT
APKDMPOB_01069 4.9e-16
APKDMPOB_01071 6e-54
APKDMPOB_01072 7.4e-09 S Bacteriocin class II with double-glycine leader peptide
APKDMPOB_01076 1.2e-51
APKDMPOB_01077 3.1e-16
APKDMPOB_01079 3.1e-10 blpU S hmm tigr01847
APKDMPOB_01080 2.6e-46 S Enterocin A Immunity
APKDMPOB_01084 8.5e-210 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
APKDMPOB_01085 1.3e-165 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
APKDMPOB_01086 3.2e-216 mesE M HlyD family secretion protein
APKDMPOB_01087 3.1e-69 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
APKDMPOB_01088 3.7e-54 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
APKDMPOB_01089 4e-184 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
APKDMPOB_01090 5e-176 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
APKDMPOB_01091 7e-147 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
APKDMPOB_01092 8.5e-96 thiJ 2.7.11.1, 3.5.1.124 S DJ-1 family
APKDMPOB_01093 8.3e-86 S TraX protein
APKDMPOB_01095 3.9e-309 FbpA K RNA-binding protein homologous to eukaryotic snRNP
APKDMPOB_01096 3.9e-26 dinF V drug transmembrane transporter activity
APKDMPOB_01097 8.7e-73 dinF V Mate efflux family protein
APKDMPOB_01098 6.9e-17 yclQ P ABC-type enterochelin transport system, periplasmic component
APKDMPOB_01099 3.6e-14 yclQ P ABC-type enterochelin transport system, periplasmic component
APKDMPOB_01100 8.3e-119 gph 3.1.3.18 S HAD hydrolase, family IA, variant 1
APKDMPOB_01101 2.6e-143 2.4.2.3 F Phosphorylase superfamily
APKDMPOB_01104 1.5e-33 S Alpha/beta hydrolase of unknown function (DUF915)
APKDMPOB_01105 6.9e-34 S Alpha/beta hydrolase of unknown function (DUF915)
APKDMPOB_01106 7.9e-17 S Alpha/beta hydrolase of unknown function (DUF915)
APKDMPOB_01107 6e-08 S Hydrolases of the alpha beta superfamily
APKDMPOB_01108 6.2e-196 adhB 1.1.1.1, 1.1.1.14 E Dehydrogenase
APKDMPOB_01109 2.8e-207 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
APKDMPOB_01110 3.1e-159 czcD P cation diffusion facilitator family transporter
APKDMPOB_01111 9.9e-103 K Transcriptional regulator, TetR family
APKDMPOB_01112 1.6e-10
APKDMPOB_01113 4.1e-114 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
APKDMPOB_01114 3.1e-117 V ABC transporter (Permease
APKDMPOB_01115 9.8e-107 L Transposase
APKDMPOB_01116 3.2e-107 L Transposase
APKDMPOB_01117 3e-133 budA 4.1.1.5 H Belongs to the alpha-acetolactate decarboxylase family
APKDMPOB_01118 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
APKDMPOB_01119 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
APKDMPOB_01121 1.4e-84 IQ Acetoin reductase
APKDMPOB_01122 1.3e-19 IQ Acetoin reductase
APKDMPOB_01123 1.9e-46 pspE P Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
APKDMPOB_01124 6.5e-72 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
APKDMPOB_01125 4.8e-218 XK27_05470 E Methionine synthase
APKDMPOB_01126 1.2e-255 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
APKDMPOB_01127 2.8e-244 T PhoQ Sensor
APKDMPOB_01128 1.9e-121 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
APKDMPOB_01129 1.5e-152 S TraX protein
APKDMPOB_01130 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
APKDMPOB_01131 3.5e-157 dprA LU DNA protecting protein DprA
APKDMPOB_01132 3.5e-166 GK ROK family
APKDMPOB_01133 2.6e-135 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
APKDMPOB_01134 1.1e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
APKDMPOB_01135 8.1e-128 K DNA-binding helix-turn-helix protein
APKDMPOB_01136 2.8e-88 niaR S small molecule binding protein (contains 3H domain)
APKDMPOB_01137 2.9e-85 niaX
APKDMPOB_01138 6.7e-271 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
APKDMPOB_01139 4.2e-53 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
APKDMPOB_01140 2e-126 gntR1 K transcriptional
APKDMPOB_01141 3.9e-303 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
APKDMPOB_01142 2.8e-91 sthIM 2.1.1.72 L Adenine specific DNA methylase Mod
APKDMPOB_01143 2.7e-252 sthIM 2.1.1.72 L Adenine specific DNA methylase Mod
APKDMPOB_01144 0.0 res_1 3.1.21.5 S Type III restriction
APKDMPOB_01145 5.1e-21
APKDMPOB_01147 8.5e-79 adhP 1.1.1.1 C alcohol dehydrogenase
APKDMPOB_01148 8.4e-17 adhP 1.1.1.1 C alcohol dehydrogenase
APKDMPOB_01149 9.2e-26
APKDMPOB_01150 2.1e-07
APKDMPOB_01151 6.6e-111 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
APKDMPOB_01152 5e-67 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
APKDMPOB_01153 4.6e-157 aatB ET ABC transporter substrate-binding protein
APKDMPOB_01154 2e-112 glnQ 3.6.3.21 E abc transporter atp-binding protein
APKDMPOB_01155 3.1e-105 artQ P ABC transporter (Permease
APKDMPOB_01156 4.7e-57 phnA P Alkylphosphonate utilization operon protein PhnA
APKDMPOB_01157 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
APKDMPOB_01158 9.9e-166 cpsY K Transcriptional regulator
APKDMPOB_01159 1.6e-29 L transposase activity
APKDMPOB_01160 5.8e-97 mur1 NU muramidase
APKDMPOB_01161 1.8e-171 yeiH S Membrane
APKDMPOB_01162 3.7e-08
APKDMPOB_01163 1.2e-291 adcA P Belongs to the bacterial solute-binding protein 9 family
APKDMPOB_01164 3.1e-69 XK27_10720 D peptidase activity
APKDMPOB_01165 4.5e-79 hsdM 2.1.1.72 V HsdM N-terminal domain
APKDMPOB_01166 1.1e-08 mycA 4.2.1.53 S Myosin-crossreactive antigen
APKDMPOB_01167 8e-144 glcU U sugar transport
APKDMPOB_01168 4.4e-112 hsdM 2.1.1.72 V type I restriction-modification system
APKDMPOB_01169 9.1e-53 hsdS 2.1.1.72, 3.1.21.3 V type I restriction modification DNA specificity domain
APKDMPOB_01170 2.9e-11 L Transposase
APKDMPOB_01171 9.7e-180 L Transposase
APKDMPOB_01172 0.0
APKDMPOB_01174 1e-32 K Peptidase S24-like
APKDMPOB_01175 1.4e-234 L Transposase
APKDMPOB_01176 1.6e-147 glcU U Glucose uptake
APKDMPOB_01177 7.4e-22 L Transposase
APKDMPOB_01178 9.7e-180 L Transposase
APKDMPOB_01179 2.8e-58 S Uncharacterised lipoprotein family
APKDMPOB_01180 8.2e-44 L Transposase DDE domain
APKDMPOB_01181 7.8e-123 tnp L DDE domain
APKDMPOB_01183 1.6e-28
APKDMPOB_01184 5.1e-30 cspD K Cold shock protein domain
APKDMPOB_01185 3.6e-42 K Cold-Shock Protein
APKDMPOB_01186 3.4e-80 L Transposase and inactivated derivatives
APKDMPOB_01187 3.8e-20 L transposase activity
APKDMPOB_01188 3e-63 pepD E Dipeptidase
APKDMPOB_01189 4.7e-80 pepD E Dipeptidase
APKDMPOB_01190 5.7e-161 whiA K May be required for sporulation
APKDMPOB_01191 1.1e-181 ybhK S Required for morphogenesis under gluconeogenic growth conditions
APKDMPOB_01192 4.5e-163 rapZ S Displays ATPase and GTPase activities
APKDMPOB_01193 2.2e-134 yejC S cyclic nucleotide-binding protein
APKDMPOB_01194 2.3e-33 D nuclear chromosome segregation
APKDMPOB_01195 5.5e-94 queF 1.7.1.13 S Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily
APKDMPOB_01196 1.1e-132 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
APKDMPOB_01197 6.3e-81 queD 4.1.2.50, 4.2.3.12 H synthase
APKDMPOB_01198 1.3e-122 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
APKDMPOB_01199 3e-63 tdcF 3.5.99.10 J endoribonuclease L-PSP
APKDMPOB_01200 3.9e-13 L Transposase
APKDMPOB_01201 5.4e-22
APKDMPOB_01202 1.3e-52 L Transposase
APKDMPOB_01203 8.5e-16
APKDMPOB_01204 4.2e-261 asnS 6.1.1.22 J Catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
APKDMPOB_01205 1e-215 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
APKDMPOB_01206 7.6e-80 ypmB S Protein conserved in bacteria
APKDMPOB_01207 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
APKDMPOB_01208 4e-121 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
APKDMPOB_01209 5e-168 yufQ S Belongs to the binding-protein-dependent transport system permease family
APKDMPOB_01210 4.7e-191 yufP S Belongs to the binding-protein-dependent transport system permease family
APKDMPOB_01211 3.7e-282 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
APKDMPOB_01212 1.5e-189 tcsA S ABC-type transport system, periplasmic component surface lipoprotein
APKDMPOB_01213 2.3e-66 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
APKDMPOB_01214 8.4e-81 deoC 4.1.2.4, 5.4.2.8 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
APKDMPOB_01215 1.1e-24 pdp 2.4.2.2, 2.4.2.4 F phosphorylase activity
APKDMPOB_01216 2.1e-32 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
APKDMPOB_01217 2e-34 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
APKDMPOB_01218 2.1e-14 pdp 2.4.2.2, 2.4.2.4 F Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
APKDMPOB_01219 1.4e-104 rsmC 2.1.1.172 J Methyltransferase small domain protein
APKDMPOB_01220 3.6e-171 coaA 2.7.1.33 F Pantothenic acid kinase
APKDMPOB_01221 2.3e-29 rpsT J rRNA binding
APKDMPOB_01222 4.3e-227 T PhoQ Sensor
APKDMPOB_01223 1.5e-118 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
APKDMPOB_01224 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
APKDMPOB_01225 1.2e-120 coaB 4.1.1.36, 6.3.2.5 H Phosphopantothenate-cysteine ligase
APKDMPOB_01226 2.2e-91 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
APKDMPOB_01227 9.2e-93 panT S ECF transporter, substrate-specific component
APKDMPOB_01228 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
APKDMPOB_01229 3.6e-165 metF 1.5.1.20 C reductase
APKDMPOB_01230 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
APKDMPOB_01232 1.8e-220 sip L Belongs to the 'phage' integrase family
APKDMPOB_01233 5.3e-19 xre K Transcriptional regulator
APKDMPOB_01234 1.4e-19 K TRANSCRIPTIONal
APKDMPOB_01238 3.9e-14
APKDMPOB_01239 7.7e-21
APKDMPOB_01240 1e-132 KL Phage plasmid primase P4 family
APKDMPOB_01241 1.2e-74 S Virulence-associated protein E
APKDMPOB_01242 9.2e-14
APKDMPOB_01244 0.0 pabB 2.6.1.85, 4.1.3.27, 4.1.3.38 EH component I
APKDMPOB_01245 0.0 3.6.3.8 P cation transport ATPase
APKDMPOB_01246 6e-46 L transposase activity
APKDMPOB_01247 2.8e-19 L Integrase core domain protein
APKDMPOB_01248 5.2e-229 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
APKDMPOB_01249 8.2e-35 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
APKDMPOB_01250 4.6e-230 dltB M Membrane protein involved in D-alanine export
APKDMPOB_01251 8.7e-295 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
APKDMPOB_01252 1.3e-09 S D-Ala-teichoic acid biosynthesis protein
APKDMPOB_01253 2.4e-311 XK27_10035 V abc transporter atp-binding protein
APKDMPOB_01254 6.5e-307 yfiB1 V abc transporter atp-binding protein
APKDMPOB_01255 8e-100 pvaA M lytic transglycosylase activity
APKDMPOB_01256 7.4e-175 ndpA S 37-kD nucleoid-associated bacterial protein
APKDMPOB_01257 1.3e-232 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
APKDMPOB_01258 1.1e-107 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
APKDMPOB_01259 8.6e-148 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
APKDMPOB_01260 3.3e-192 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
APKDMPOB_01261 2.4e-112 tdk 2.7.1.21 F thymidine kinase
APKDMPOB_01262 4.6e-188 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
APKDMPOB_01263 2.4e-155 gst O Glutathione S-transferase
APKDMPOB_01264 1.3e-176 nrnA 3.1.13.3, 3.1.3.7 S domain protein
APKDMPOB_01265 2.3e-170 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
APKDMPOB_01266 2.4e-43 rpmE2 J 50S ribosomal protein L31
APKDMPOB_01267 5.9e-217 mntH P Mn2 and Fe2 transporters of the NRAMP family
APKDMPOB_01268 3.1e-64 L the current gene model (or a revised gene model) may contain a frame shift
APKDMPOB_01269 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
APKDMPOB_01270 3.8e-130 divIVA D Cell division protein DivIVA
APKDMPOB_01271 8.2e-140 ylmH T S4 RNA-binding domain
APKDMPOB_01272 5.7e-34 yggT D integral membrane protein
APKDMPOB_01273 7e-93 sepF D cell septum assembly
APKDMPOB_01274 3.3e-121 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
APKDMPOB_01275 2.5e-234 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
APKDMPOB_01276 2.3e-246 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
APKDMPOB_01277 8.8e-164 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
APKDMPOB_01278 1.9e-195 murG 2.4.1.227 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
APKDMPOB_01279 5.7e-250 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
APKDMPOB_01281 0.0 typA T GTP-binding protein TypA
APKDMPOB_01282 1.2e-177 glk 2.7.1.2 G Glucokinase
APKDMPOB_01283 1.9e-27 yqgQ S protein conserved in bacteria
APKDMPOB_01284 1.5e-79 perR P Belongs to the Fur family
APKDMPOB_01285 1.6e-91 dps P Belongs to the Dps family
APKDMPOB_01286 4.8e-114 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
APKDMPOB_01287 9.5e-178 3.5.2.6 V D-alanyl-D-alanine carboxypeptidase
APKDMPOB_01288 7.9e-111 sodA 1.15.1.1 C radicals which are normally produced within the cells and which are toxic to biological systems
APKDMPOB_01289 2.5e-181 holA 2.7.7.7 L DNA polymerase III delta subunit
APKDMPOB_01290 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
APKDMPOB_01291 1.8e-55 S Domain of unknown function (DUF4430)
APKDMPOB_01292 1.2e-74 S Psort location CytoplasmicMembrane, score
APKDMPOB_01293 2.1e-131 htpX O Belongs to the peptidase M48B family
APKDMPOB_01294 1.1e-90 lemA S LemA family
APKDMPOB_01295 3e-69 spd F DNA RNA non-specific endonuclease
APKDMPOB_01296 2e-42 spd F DNA RNA non-specific endonuclease
APKDMPOB_01297 2.4e-14 spd F DNA RNA non-specific endonuclease
APKDMPOB_01298 5.9e-22 S PD-(D/E)XK nuclease family transposase
APKDMPOB_01299 2.8e-304 hsdM 2.1.1.72 V type I restriction-modification system
APKDMPOB_01300 8.5e-42 K Helix-turn-helix domain
APKDMPOB_01301 2.1e-89 3.1.21.3 V Type I restriction modification DNA specificity domain
APKDMPOB_01303 2e-165 S Bacteriophage abortive infection AbiH
APKDMPOB_01304 3.1e-184 hsdR 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
APKDMPOB_01305 0.0 hsdR 3.1.21.3 L Subunit R is required for both nuclease and ATPase activities, but not for modification
APKDMPOB_01306 1.8e-128 sdh 1.1.1.276, 1.1.1.313, 1.1.1.381 S Belongs to the short-chain dehydrogenases reductases (SDR) family
APKDMPOB_01307 2.9e-48 MA20_36090 S Protein of unknown function (DUF2974)
APKDMPOB_01308 6e-37 MA20_36090 S Protein of unknown function (DUF2974)
APKDMPOB_01309 1.7e-10 MA20_36090 S Protein of unknown function (DUF2974)
APKDMPOB_01310 5.2e-113 1.14.14.5 C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
APKDMPOB_01311 3.5e-27 P Hemerythrin HHE cation binding domain protein
APKDMPOB_01312 9.7e-148 XK27_00880 3.5.1.28 M Glycosyl hydrolase, family 25
APKDMPOB_01313 3e-81 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
APKDMPOB_01314 3.3e-115 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase
APKDMPOB_01315 1.9e-172 S hydrolase
APKDMPOB_01318 7.2e-55 M LysM domain
APKDMPOB_01319 2.5e-44 M LysM domain
APKDMPOB_01320 1.6e-14 M LysM domain
APKDMPOB_01321 2.1e-282 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
APKDMPOB_01322 1.7e-177 S Hydrophobic domain protein
APKDMPOB_01324 8.9e-223 L to GB X15145, SP P26998, PID 1340164, GB X15145, SP P26998, and PID 1340164
APKDMPOB_01325 1.2e-24 S TIR domain
APKDMPOB_01327 1.5e-23 M Protein conserved in bacteria
APKDMPOB_01328 1.8e-49 P Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
APKDMPOB_01329 4.3e-28 yetL K helix_turn_helix multiple antibiotic resistance protein
APKDMPOB_01330 1.8e-49 P Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
APKDMPOB_01331 4.3e-28 yetL K helix_turn_helix multiple antibiotic resistance protein
APKDMPOB_01332 1.8e-49 P Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
APKDMPOB_01333 4.6e-12 E lactoylglutathione lyase activity
APKDMPOB_01334 2.3e-21 2.3.1.179 IQ Beta-ketoacyl synthase, C-terminal domain
APKDMPOB_01335 5.4e-85 2.3.1.179 IQ Beta-ketoacyl synthase, C-terminal domain
APKDMPOB_01336 1.3e-73 MA20_38045 S Putative cyclase
APKDMPOB_01338 1.8e-12 C geranylgeranyl reductase activity
APKDMPOB_01339 8.1e-168 alkA 4.2.99.18 L 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
APKDMPOB_01340 1.6e-193 3.6.4.12 K Transcriptional regulator
APKDMPOB_01341 2.2e-59
APKDMPOB_01343 2.6e-36
APKDMPOB_01344 4.1e-200 L Replication initiation factor
APKDMPOB_01345 5.3e-41 S Helix-turn-helix domain
APKDMPOB_01346 3.1e-223 int2 L Belongs to the 'phage' integrase family
APKDMPOB_01348 1.5e-69 S Protein of unknown function DUF89
APKDMPOB_01349 3.2e-87 dam 2.1.1.72 H Site-specific DNA-methyltransferase (Adenine-specific)
APKDMPOB_01350 1.1e-101 2.1.1.72 L D12 class N6 adenine-specific DNA methyltransferase
APKDMPOB_01351 1.5e-69 K Peptidase S24-like protein
APKDMPOB_01352 1.3e-29
APKDMPOB_01353 8.9e-41
APKDMPOB_01354 2.9e-220 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
APKDMPOB_01355 2.6e-118 K Peptidase S24-like
APKDMPOB_01356 1.7e-146 E IrrE N-terminal-like domain
APKDMPOB_01358 2.1e-40
APKDMPOB_01359 5.8e-20
APKDMPOB_01360 4.1e-46
APKDMPOB_01361 3.7e-48 S Bacteriophage abortive infection AbiH
APKDMPOB_01363 9.5e-53 K sequence-specific DNA binding
APKDMPOB_01365 5.4e-36
APKDMPOB_01366 3.2e-48
APKDMPOB_01367 1.7e-243 ydcQ D Ftsk spoiiie family protein
APKDMPOB_01368 2.8e-235 K Replication initiation factor
APKDMPOB_01369 4.2e-28
APKDMPOB_01370 1.7e-72
APKDMPOB_01371 3e-83 S Conjugative transposon protein TcpC
APKDMPOB_01372 7.2e-25
APKDMPOB_01373 2.3e-72 S TcpE family
APKDMPOB_01374 0.0 yddE S AAA-like domain
APKDMPOB_01375 2.5e-267
APKDMPOB_01376 1.1e-07
APKDMPOB_01377 2e-176 S pathogenesis
APKDMPOB_01378 6.8e-107 abiGI K Transcriptional regulator, AbiEi antitoxin
APKDMPOB_01379 2e-149 S Nucleotidyl transferase AbiEii toxin, Type IV TA system
APKDMPOB_01380 5.9e-31 S DNA binding domain, excisionase family
APKDMPOB_01381 1.5e-233 L Belongs to the 'phage' integrase family
APKDMPOB_01382 0.0 L helicase
APKDMPOB_01383 3.1e-68 nudG 3.6.1.55, 3.6.1.65 L Belongs to the Nudix hydrolase family
APKDMPOB_01384 1.9e-234 mntH P H( )-stimulated, divalent metal cation uptake system
APKDMPOB_01385 1.1e-33 XK27_12190 S protein conserved in bacteria
APKDMPOB_01387 2.3e-85 bioY S biotin synthase
APKDMPOB_01388 3.7e-251 yegQ O Peptidase U32
APKDMPOB_01389 4.9e-176 yegQ O Peptidase U32
APKDMPOB_01391 5.7e-66 ytxH S General stress protein
APKDMPOB_01392 4e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
APKDMPOB_01393 1.4e-144 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
APKDMPOB_01394 4.9e-168 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
APKDMPOB_01395 1.9e-40 pspC KT PspC domain
APKDMPOB_01396 0.0 yhgF K Transcriptional accessory protein
APKDMPOB_01398 3.9e-154 XK27_03015 S permease
APKDMPOB_01399 4.2e-147 ycgQ S TIGR03943 family
APKDMPOB_01400 2.6e-194 S CRISPR-associated protein Csn2 subfamily St
APKDMPOB_01401 1.2e-52 cas2 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
APKDMPOB_01402 3.6e-60 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
APKDMPOB_01403 7.7e-75 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
APKDMPOB_01404 0.0 cas9 L CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans-encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. The tracrRNA serves as a guide for ribonuclease 3-aided processing of pre-crRNA. Subsequently Cas9 crRNA tracrRNA endonucleolytically cleaves linear or circular dsDNA target complementary to the spacer
APKDMPOB_01405 2.1e-95
APKDMPOB_01406 7.3e-27 estA E GDSL-like Lipase/Acylhydrolase
APKDMPOB_01407 1.7e-26 S CAAX protease self-immunity
APKDMPOB_01408 3.1e-33
APKDMPOB_01409 1.7e-63 yqeB S Pyrimidine dimer DNA glycosylase
APKDMPOB_01410 1.7e-58 S Protein of unknown function (DUF1722)
APKDMPOB_01411 3.8e-07 S An automated process has identified a potential problem with this gene model
APKDMPOB_01412 8.9e-11
APKDMPOB_01413 3e-25 L COG2801 Transposase and inactivated derivatives
APKDMPOB_01414 1.1e-68 L transposition
APKDMPOB_01415 1.5e-37 L transposase activity
APKDMPOB_01416 2.8e-94
APKDMPOB_01417 4.5e-86 J Acetyltransferase (GNAT) domain
APKDMPOB_01418 7.1e-31 K TfoX N-terminal domain
APKDMPOB_01419 6.1e-252 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
APKDMPOB_01420 7.7e-97 mip S hydroperoxide reductase activity
APKDMPOB_01421 9.1e-203 I acyl-CoA dehydrogenase
APKDMPOB_01422 8.5e-149 ydiA P C4-dicarboxylate transporter malic acid transport protein
APKDMPOB_01423 2.1e-250 msrR K Transcriptional regulator
APKDMPOB_01424 5.1e-153 pheA 4.2.1.51 E Prephenate dehydratase
APKDMPOB_01425 1.7e-87 aroK 1.1.1.25, 2.7.1.71, 4.2.1.10, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
APKDMPOB_01426 8.3e-235 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
APKDMPOB_01427 5.7e-172 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily
APKDMPOB_01428 1.2e-52 yheA S Belongs to the UPF0342 family
APKDMPOB_01429 8.3e-207 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
APKDMPOB_01430 4.5e-219 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
APKDMPOB_01431 2.5e-200 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
APKDMPOB_01432 8.2e-162 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
APKDMPOB_01433 8.6e-122 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
APKDMPOB_01434 9e-220 ywbD 2.1.1.191 J Methyltransferase
APKDMPOB_01435 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
APKDMPOB_01436 1.7e-24 WQ51_00785
APKDMPOB_01437 1.4e-245 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
APKDMPOB_01438 4.5e-74 yueI S Protein of unknown function (DUF1694)
APKDMPOB_01439 1.5e-62 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
APKDMPOB_01440 1.3e-61 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
APKDMPOB_01441 8e-45 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
APKDMPOB_01442 1.5e-192 yyaQ S YjbR
APKDMPOB_01443 1.1e-176 ccpA K Catabolite control protein A
APKDMPOB_01444 3.3e-208 pepQ 3.4.13.9 E Belongs to the peptidase M24B family
APKDMPOB_01445 6.5e-63 yugI 5.3.1.9 J RNA binding protein, contains ribosomal protein S1 domain
APKDMPOB_01446 3.1e-275 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
APKDMPOB_01447 1.5e-80 smpB O the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
APKDMPOB_01448 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
APKDMPOB_01449 2.6e-33 secG U Preprotein translocase subunit SecG
APKDMPOB_01450 8e-219 mdtG EGP Major facilitator Superfamily
APKDMPOB_01451 7.1e-104 coaE 2.7.1.24, 3.2.2.23, 4.2.99.18 GH23 H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
APKDMPOB_01452 1.9e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
APKDMPOB_01453 1.3e-165 era M An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
APKDMPOB_01454 2.9e-64 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
APKDMPOB_01455 1.7e-87 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
APKDMPOB_01456 1.1e-133 licT K antiterminator
APKDMPOB_01457 2.4e-104 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
APKDMPOB_01458 0.0 pbp2b 3.4.16.4 M penicillin-binding protein
APKDMPOB_01459 7.8e-149 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
APKDMPOB_01460 2.7e-157 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
APKDMPOB_01461 5.2e-24 I Alpha/beta hydrolase family
APKDMPOB_01462 2.5e-33 yugF I carboxylic ester hydrolase activity
APKDMPOB_01463 6.3e-45 K sequence-specific DNA binding
APKDMPOB_01464 6.8e-104 1.1.1.133, 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
APKDMPOB_01465 1.5e-07
APKDMPOB_01466 0.0 feoB P transporter of a GTP-driven Fe(2 ) uptake system
APKDMPOB_01467 1e-76 feoA P FeoA domain protein
APKDMPOB_01468 1.2e-129 glnQ 3.6.3.21 E abc transporter atp-binding protein
APKDMPOB_01469 7.5e-118 WQ51_01820 P Binding-protein-dependent transport system inner membrane component
APKDMPOB_01471 5.1e-34 ykuJ S protein conserved in bacteria
APKDMPOB_01472 1.1e-187 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
APKDMPOB_01473 0.0 clpE O Belongs to the ClpA ClpB family
APKDMPOB_01474 4.1e-83 mutT 3.5.4.33, 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
APKDMPOB_01475 2.2e-45 XK27_09445 S Domain of unknown function (DUF1827)
APKDMPOB_01476 1.2e-103 S oxidoreductase
APKDMPOB_01477 5.8e-36 S oxidoreductase
APKDMPOB_01479 3.2e-231 murN 2.3.2.10, 2.3.2.16 V FemAB family
APKDMPOB_01480 5.7e-68 M Pfam SNARE associated Golgi protein
APKDMPOB_01481 2.6e-101 S Domain of Unknown Function with PDB structure (DUF3862)
APKDMPOB_01484 1.9e-201 rpsA 1.17.7.4 J ribosomal protein S1
APKDMPOB_01487 1.4e-15 S Protein of unknown function (DUF2969)
APKDMPOB_01488 3.8e-198 ilvE 2.6.1.42 E Aminotransferase
APKDMPOB_01489 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
APKDMPOB_01490 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
APKDMPOB_01491 7.9e-101 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
APKDMPOB_01492 3.7e-15 L Helix-hairpin-helix DNA-binding motif class 1
APKDMPOB_01493 1.4e-29 S Domain of unknown function (DUF1912)
APKDMPOB_01494 3.2e-175 mmuM 1.5.1.20, 2.1.1.10 H Homocysteine
APKDMPOB_01495 3.7e-249 mmuP E amino acid
APKDMPOB_01496 3e-110 engB D Necessary for normal cell division and for the maintenance of normal septation
APKDMPOB_01497 2.8e-224 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
APKDMPOB_01498 9.7e-22
APKDMPOB_01499 1.3e-90 folA 1.5.1.3, 1.5.1.47, 2.1.1.45, 3.5.4.12 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
APKDMPOB_01500 1.1e-166 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
APKDMPOB_01501 1.7e-218 mvaS 2.3.3.10 I synthase
APKDMPOB_01502 2.6e-228 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
APKDMPOB_01503 7.9e-224 L Transposase
APKDMPOB_01504 1e-114 yqfA K protein, Hemolysin III
APKDMPOB_01505 7.9e-22 S Protein of unknown function (DUF3114)
APKDMPOB_01506 1.2e-163 S Protein of unknown function (DUF3114)
APKDMPOB_01507 2.1e-31 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
APKDMPOB_01508 7.1e-51 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
APKDMPOB_01509 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
APKDMPOB_01510 4.9e-21 XK27_13030
APKDMPOB_01511 1.2e-247 mgs 2.4.1.337 GT4 M Glycosyltransferase, group 1 family protein
APKDMPOB_01512 7.6e-191 dgs 2.4.1.208 GT4 M Glycosyltransferase, group 1 family protein
APKDMPOB_01513 9.6e-76 U protein secretion
APKDMPOB_01514 5.1e-29 U protein secretion
APKDMPOB_01515 1e-117 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
APKDMPOB_01516 2.9e-17
APKDMPOB_01517 1.1e-95 nudF 3.6.1.13 L AdP-ribose pyrophosphatase
APKDMPOB_01518 1.6e-252 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
APKDMPOB_01519 3.2e-189 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
APKDMPOB_01520 4e-168 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I GHMP kinases N terminal domain
APKDMPOB_01521 5e-168 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
APKDMPOB_01522 1.8e-135 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I mevalonate kinase
APKDMPOB_01523 9.1e-101 GBS0088 J protein conserved in bacteria
APKDMPOB_01524 1.2e-247 merA 1.16.1.1 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
APKDMPOB_01525 2e-47 ald 1.4.1.1 C Belongs to the AlaDH PNT family
APKDMPOB_01526 3.4e-17 ald 1.4.1.1 E alanine dehydrogenase activity
APKDMPOB_01527 1.2e-216 hipO 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
APKDMPOB_01528 2e-129 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
APKDMPOB_01529 4.3e-113 S VIT family
APKDMPOB_01530 2.8e-145 deoD_1 2.4.2.3 F Phosphorylase superfamily
APKDMPOB_01531 1.2e-19
APKDMPOB_01532 1e-27 XK27_00085 K Transcriptional
APKDMPOB_01533 3.4e-196 yceA S Belongs to the UPF0176 family
APKDMPOB_01534 2.2e-120 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
APKDMPOB_01535 4.6e-199 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
APKDMPOB_01536 0.0 lmrA V abc transporter atp-binding protein
APKDMPOB_01537 0.0 mdlB V abc transporter atp-binding protein
APKDMPOB_01538 5.3e-27 K DNA-binding transcription factor activity
APKDMPOB_01539 3.9e-271 opuD M Belongs to the BCCT transporter (TC 2.A.15) family
APKDMPOB_01540 5.9e-103 abiGI K Transcriptional regulator, AbiEi antitoxin
APKDMPOB_01541 7.3e-31 XK27_00530 M CHAP domain protein
APKDMPOB_01543 0.0 M the current gene model (or a revised gene model) may contain a
APKDMPOB_01544 5.1e-44 M YSIRK type signal peptide
APKDMPOB_01545 1.5e-40 S MucBP domain
APKDMPOB_01546 2.6e-78 L Integrase core domain
APKDMPOB_01547 3.9e-52 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
APKDMPOB_01548 1.8e-76 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
APKDMPOB_01549 1e-19 ytrF V efflux transmembrane transporter activity
APKDMPOB_01550 2.2e-19 V efflux transmembrane transporter activity
APKDMPOB_01551 9.1e-32 V permease protein
APKDMPOB_01552 6.4e-35 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
APKDMPOB_01553 2.2e-21 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
APKDMPOB_01554 6.9e-18 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
APKDMPOB_01555 1.2e-127 2.1.1.223 S Putative SAM-dependent methyltransferase
APKDMPOB_01556 0.0 carB 6.3.5.5 F carbamoyl-phosphate synthetase ammonia chain
APKDMPOB_01557 1.2e-210 carA 6.3.5.5 F carbamoyl-phosphate synthetase glutamine chain
APKDMPOB_01558 1.1e-172 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
APKDMPOB_01559 2.4e-226 pyrP F uracil Permease
APKDMPOB_01560 1.1e-87 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
APKDMPOB_01561 8.5e-162 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
APKDMPOB_01562 2.6e-77 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
APKDMPOB_01563 1.5e-166 fhuR K transcriptional regulator (lysR family)
APKDMPOB_01568 3.2e-141 ppiA 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
APKDMPOB_01569 3.9e-53 pts33BCA G pts system
APKDMPOB_01570 3.9e-76 pts33BCA 2.7.1.201, 2.7.1.208, 2.7.1.211 G pts system
APKDMPOB_01571 4.1e-34 pts33BCA G pts system
APKDMPOB_01572 1.5e-46 pts33BCA G pts system
APKDMPOB_01573 4.8e-24 pts33BCA G pts system
APKDMPOB_01574 1.4e-09 uvrX 2.7.7.7 L impB/mucB/samB family
APKDMPOB_01575 9.3e-248 cycA E permease
APKDMPOB_01576 4.5e-39 ynzC S UPF0291 protein
APKDMPOB_01577 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
APKDMPOB_01578 2e-174 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
APKDMPOB_01579 3.3e-66 S membrane
APKDMPOB_01580 1.4e-32 S membrane
APKDMPOB_01581 1.4e-29 S membrane
APKDMPOB_01582 1.7e-215 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
APKDMPOB_01583 1.8e-66 nptA P COG1283 Na phosphate symporter
APKDMPOB_01584 8.7e-145 XK27_04800 S Sucrose-6F-phosphate phosphohydrolase
APKDMPOB_01585 6e-104 mur1 NU mannosyl-glycoprotein
APKDMPOB_01586 1.8e-51 glnB K Belongs to the P(II) protein family
APKDMPOB_01587 5.8e-225 amt P Ammonium Transporter
APKDMPOB_01588 5e-159 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
APKDMPOB_01589 9.5e-55 yabA L Involved in initiation control of chromosome replication
APKDMPOB_01590 4.6e-130 yaaT S stage 0 sporulation protein
APKDMPOB_01591 6e-160 holB 2.7.7.7 L dna polymerase iii
APKDMPOB_01592 1.1e-110 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
APKDMPOB_01593 3.5e-132 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
APKDMPOB_01594 1.1e-223 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
APKDMPOB_01595 1.9e-226 ftsW D Belongs to the SEDS family
APKDMPOB_01596 1.4e-53 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
APKDMPOB_01597 4.4e-261 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
APKDMPOB_01598 1.9e-153 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
APKDMPOB_01599 6.1e-277 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
APKDMPOB_01600 3.9e-85 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
APKDMPOB_01601 1.3e-74 atpF C ATP synthase F(0) sector subunit b
APKDMPOB_01602 2.2e-120 atpB C it plays a direct role in the translocation of protons across the membrane
APKDMPOB_01603 2.4e-16 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
APKDMPOB_01604 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
APKDMPOB_01605 5.5e-73 2.3.1.128, 5.2.1.8 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
APKDMPOB_01606 4.4e-106 S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
APKDMPOB_01607 8.9e-14 coiA 3.6.4.12 S Competence protein
APKDMPOB_01608 1.3e-15 T peptidase
APKDMPOB_01609 4.7e-152 rarD S Transporter
APKDMPOB_01610 5e-151 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
APKDMPOB_01611 1.9e-234 hom 1.1.1.3, 2.7.2.4 E homoserine dehydrogenase
APKDMPOB_01612 2.6e-126 yxkH G deacetylase
APKDMPOB_01613 1.1e-206 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
APKDMPOB_01614 2.2e-123 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
APKDMPOB_01615 9.2e-220 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
APKDMPOB_01616 5e-190 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
APKDMPOB_01617 3.2e-225 mtnE 2.6.1.83 E mutations do not affect methionine salvage in vivo however
APKDMPOB_01618 2e-146 cnhA 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
APKDMPOB_01619 2.9e-240 vanY 3.4.17.14, 3.5.1.28 M D-alanyl-D-alanine carboxypeptidase
APKDMPOB_01620 9.7e-22 3.4.17.14, 3.5.1.28 M GBS Bsp-like repeat
APKDMPOB_01621 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
APKDMPOB_01622 3e-159 prsA 3.1.3.16, 5.2.1.8 O peptidyl-prolyl cis-trans isomerase activity
APKDMPOB_01623 2.3e-125 yrrM 2.1.1.104 S O-Methyltransferase
APKDMPOB_01624 0.0 pepF E oligoendopeptidase F
APKDMPOB_01625 6.1e-182 coiA 3.6.4.12 S Competence protein
APKDMPOB_01626 1.5e-166 K transcriptional regulator (lysR family)
APKDMPOB_01627 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
APKDMPOB_01632 2.3e-190 phoH T phosphate starvation-inducible protein PhoH
APKDMPOB_01633 5.1e-15 rlpA M LysM domain protein
APKDMPOB_01635 3.4e-115 usp 3.5.1.104, 3.5.1.28 CBM50 S pathogenesis
APKDMPOB_01636 7.4e-35 yozE S Belongs to the UPF0346 family
APKDMPOB_01637 1.1e-158 cvfB S Protein conserved in bacteria
APKDMPOB_01638 3.8e-91 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
APKDMPOB_01639 1.2e-129 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
APKDMPOB_01640 1.9e-123 sptS 2.7.13.3 T Histidine kinase
APKDMPOB_01641 2.8e-28 T response regulator
APKDMPOB_01642 7.9e-32 T response regulator
APKDMPOB_01643 2.6e-28 2.7.6.5 S Region found in RelA / SpoT proteins
APKDMPOB_01644 1e-26 2.7.6.5 S Region found in RelA / SpoT proteins
APKDMPOB_01645 1.3e-57 K Acetyltransferase (GNAT) family
APKDMPOB_01646 0.0 lmrA2 V abc transporter atp-binding protein
APKDMPOB_01647 4e-307 lmrA1 V abc transporter atp-binding protein
APKDMPOB_01648 6.1e-76 K DNA-binding transcription factor activity
APKDMPOB_01649 1.8e-69 def_1 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
APKDMPOB_01650 4.2e-253 gdhA 1.4.1.4 E Belongs to the Glu Leu Phe Val dehydrogenases family
APKDMPOB_01651 1.4e-43 nadD 2.7.1.22, 2.7.7.1, 2.7.7.18, 3.6.1.55 H adenylyltransferase
APKDMPOB_01652 5.3e-136 3.6.1.13, 3.6.1.55 F AdP-ribose pyrophosphatase
APKDMPOB_01653 1.5e-22 U response to pH
APKDMPOB_01654 0.0 yfmR S abc transporter atp-binding protein
APKDMPOB_01655 7.8e-219 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
APKDMPOB_01656 4.8e-137 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
APKDMPOB_01657 1.1e-147 XK27_08360 S EDD domain protein, DegV family
APKDMPOB_01658 2.9e-63 WQ51_03320 S cog cog4835
APKDMPOB_01659 2.9e-85 ydaF_2 J COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
APKDMPOB_01660 1.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
APKDMPOB_01661 1.7e-48 rplU J This protein binds to 23S rRNA in the presence of protein L20
APKDMPOB_01662 1.2e-27 2.3.1.128 K acetyltransferase
APKDMPOB_01663 6.4e-39 2.3.1.128 K acetyltransferase
APKDMPOB_01664 2e-252 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
APKDMPOB_01665 7.9e-293 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
APKDMPOB_01666 8.8e-226 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
APKDMPOB_01667 5.7e-211 iscS2 2.8.1.7 E Cysteine sulfinate desulfinase cysteine desulfurase and related enzymes
APKDMPOB_01669 1.2e-238 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
APKDMPOB_01670 3.9e-259 gor 1.8.1.7 C Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
APKDMPOB_01671 0.0 fruA 2.7.1.202 G phosphotransferase system
APKDMPOB_01672 1.3e-162 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
APKDMPOB_01673 9.5e-114 fruR K transcriptional
APKDMPOB_01674 1.1e-111 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
APKDMPOB_01675 2.2e-40 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
APKDMPOB_01676 3.6e-214 XK27_12990 P Belongs to the TelA family
APKDMPOB_01677 2.8e-58
APKDMPOB_01678 5.1e-10 gshF 6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
APKDMPOB_01679 4.7e-94 gshF 6.3.2.2, 6.3.2.29, 6.3.2.30, 6.3.2.4 H Belongs to the glutamate--cysteine ligase type 1 family
APKDMPOB_01680 6.8e-15 murE 6.3.2.13, 6.3.2.7 M to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
APKDMPOB_01681 2.7e-135 fhuC 3.6.3.34 HP COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
APKDMPOB_01682 4e-162 fhuD P ABC transporter, substratebinding protein
APKDMPOB_01683 1.5e-170 fhuB P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
APKDMPOB_01684 3.2e-157 fhuG P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
APKDMPOB_01685 4.5e-47 S Domain of unknown function (DUF1803)
APKDMPOB_01686 6.9e-42 S Domain of unknown function (DUF1803)
APKDMPOB_01687 1.1e-202 rny D Endoribonuclease that initiates mRNA decay
APKDMPOB_01688 4.7e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
APKDMPOB_01689 3.4e-93 L Transposase
APKDMPOB_01690 2e-138 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
APKDMPOB_01691 1.7e-159 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
APKDMPOB_01692 2.4e-256 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
APKDMPOB_01693 1.6e-70 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
APKDMPOB_01694 1.6e-53 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
APKDMPOB_01695 5.4e-231 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
APKDMPOB_01696 1.1e-125 IQ reductase
APKDMPOB_01697 1.2e-161 fabD 2.3.1.39 I Malonyl CoA-acyl carrier protein transacylase
APKDMPOB_01698 3.2e-170 fabK 1.3.1.9 S 2-Nitropropane dioxygenase
APKDMPOB_01699 9.7e-30 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
APKDMPOB_01700 2.3e-173 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
APKDMPOB_01701 5.8e-71 marR K Transcriptional regulator, MarR family
APKDMPOB_01702 2e-138 phaB 5.3.3.14, 5.3.3.18 I Belongs to the enoyl-CoA hydratase isomerase family
APKDMPOB_01703 1.2e-114 S Haloacid dehalogenase-like hydrolase
APKDMPOB_01704 4.5e-255 lysC 2.7.2.4 E Belongs to the aspartokinase family
APKDMPOB_01705 3.3e-191 asnA 6.3.1.1 E aspartate--ammonia ligase
APKDMPOB_01706 9.1e-256 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
APKDMPOB_01707 4.4e-130 recX 2.4.1.337 GT4 S Regulatory protein RecX
APKDMPOB_01708 7.8e-102 ygaC J Belongs to the UPF0374 family
APKDMPOB_01709 4.2e-116 S Domain of unknown function (DUF1803)
APKDMPOB_01710 5.2e-162 ppaC 3.6.1.1 C inorganic pyrophosphatase
APKDMPOB_01718 2.2e-91 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
APKDMPOB_01719 3.2e-121 comFC S Competence protein
APKDMPOB_01720 2e-252 comFA L Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
APKDMPOB_01721 1.1e-110 yvyE 3.4.13.9 S YigZ family
APKDMPOB_01722 4.9e-168 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
APKDMPOB_01723 1.2e-42 acuB S IMP dehydrogenase activity
APKDMPOB_01724 9.5e-29 acuB S IMP dehydrogenase activity
APKDMPOB_01725 2.2e-25 acuB S CBS domain
APKDMPOB_01726 1.1e-122 livF E COG0410 ABC-type branched-chain amino acid transport systems, ATPase component
APKDMPOB_01727 9.6e-138 livG E COG0411 ABC-type branched-chain amino acid transport systems, ATPase component
APKDMPOB_01728 1.2e-137 livM E Belongs to the binding-protein-dependent transport system permease family
APKDMPOB_01729 2.1e-144 livH E Belongs to the binding-protein-dependent transport system permease family
APKDMPOB_01730 8.5e-210 livJ E COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component
APKDMPOB_01731 3.9e-44 ylbG S UPF0298 protein
APKDMPOB_01732 1.4e-72 ylbF S Belongs to the UPF0342 family
APKDMPOB_01733 6.4e-105 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
APKDMPOB_01734 1.7e-111 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
APKDMPOB_01735 3.1e-09 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 G Belongs to the glycosyl hydrolase 68 family
APKDMPOB_01736 5.8e-219 malY 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
APKDMPOB_01737 4.4e-200 metB 2.5.1.48, 4.4.1.8 E cystathionine
APKDMPOB_01738 1.7e-40 pacL 3.6.3.8, 3.6.3.9 P cation transport ATPase
APKDMPOB_01739 2.9e-46 pacL 3.6.3.8, 3.6.3.9 P cation transport ATPase
APKDMPOB_01740 3.6e-280 ytgP S Membrane protein involved in the export of O-antigen and teichoic acid
APKDMPOB_01741 8.7e-273 murE 6.3.2.13, 6.3.2.7 M to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
APKDMPOB_01742 7.8e-162 femA 2.3.2.10, 2.3.2.16, 2.3.2.17, 2.3.2.18 V protein involved in methicillin resistance
APKDMPOB_01743 8.7e-54 yvdD 3.2.2.10 S Belongs to the LOG family
APKDMPOB_01744 6.6e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
APKDMPOB_01745 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
APKDMPOB_01746 1.4e-41 ylxQ J ribosomal protein
APKDMPOB_01747 4.4e-46 ylxR K Nucleic-acid-binding protein implicated in transcription termination
APKDMPOB_01748 8.4e-213 nusA K Participates in both transcription termination and antitermination
APKDMPOB_01749 5.7e-80 rimP S Required for maturation of 30S ribosomal subunits
APKDMPOB_01750 1.9e-207 brpA K Transcriptional
APKDMPOB_01751 2.5e-89 XK27_05885 2.3.1.82 M Acetyltransferase GNAT Family
APKDMPOB_01752 1.4e-77 ydiB 2.7.1.221, 5.1.1.1 M ATPase or kinase
APKDMPOB_01753 4.6e-227 L Transposase
APKDMPOB_01754 6e-242 pbuO S permease
APKDMPOB_01755 2.5e-144 yitU 3.1.3.104 S hydrolases of the HAD superfamily
APKDMPOB_01756 1.5e-140 XK27_00940 1.2.1.70, 3.5.1.9 S Metal-dependent hydrolase
APKDMPOB_01757 2.9e-171 manL 2.7.1.191 G pts system
APKDMPOB_01758 1.2e-106 manM G pts system
APKDMPOB_01759 2.5e-164 manN G PTS system mannose fructose sorbose family IID component
APKDMPOB_01760 6.5e-63 manO S protein conserved in bacteria
APKDMPOB_01761 2.9e-227 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
APKDMPOB_01762 7.9e-224 L Transposase
APKDMPOB_01763 8.6e-28
APKDMPOB_01764 6.9e-245 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
APKDMPOB_01765 1.4e-164 dnaI L Primosomal protein DnaI
APKDMPOB_01766 8.2e-213 dnaB L Replication initiation and membrane attachment
APKDMPOB_01767 1e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
APKDMPOB_01768 6.1e-277 T PhoQ Sensor
APKDMPOB_01769 3.3e-121 T Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
APKDMPOB_01770 7.6e-89 yceD K metal-binding, possibly nucleic acid-binding protein
APKDMPOB_01771 2.9e-128 rsmG 2.1.1.170 J Ribosomal RNA small subunit methyltransferase G
APKDMPOB_01772 3.7e-241 P COG0168 Trk-type K transport systems, membrane components
APKDMPOB_01773 3.3e-118 ktrA P COG0569 K transport systems, NAD-binding component
APKDMPOB_01774 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
APKDMPOB_01775 2.2e-148 cbiQ P cobalt transport
APKDMPOB_01776 0.0 ykoD P abc transporter atp-binding protein
APKDMPOB_01777 6.1e-94 S UPF0397 protein
APKDMPOB_01778 6.4e-159 salL 2.5.1.63, 2.5.1.94 S S-adenosyl-l-methionine hydroxide adenosyltransferase
APKDMPOB_01779 8.7e-210 sstT E Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
APKDMPOB_01780 1.7e-96 metI P ABC transporter (Permease
APKDMPOB_01781 1.3e-185 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
APKDMPOB_01782 5.4e-256 dapE 3.5.1.18 E COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases
APKDMPOB_01783 9.9e-158 metQ M Belongs to the NlpA lipoprotein family
APKDMPOB_01784 2.6e-144 ET amino acid transport
APKDMPOB_01785 3.8e-205 EGP Transmembrane secretion effector
APKDMPOB_01786 0.0 3.3.1.1, 3.6.1.55, 3.6.1.67 F NUDIX domain
APKDMPOB_01787 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
APKDMPOB_01788 9.7e-139 ET amino acid transport
APKDMPOB_01789 1.6e-131 cbiO P ABC transporter
APKDMPOB_01790 4.9e-137 P cobalt transport protein
APKDMPOB_01791 3.9e-176 cbiM P PDGLE domain
APKDMPOB_01792 3.7e-159 ureD O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
APKDMPOB_01793 9.5e-112 ureG KO Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
APKDMPOB_01794 5.3e-130 ureF O Required for maturation of urease via the functional incorporation of the urease nickel metallocenter
APKDMPOB_01795 6.6e-78 ureE O enzyme active site formation
APKDMPOB_01796 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
APKDMPOB_01797 7.8e-54 ureB 3.5.1.5 E Belongs to the urease beta subunit family
APKDMPOB_01798 7.6e-46 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
APKDMPOB_01799 1.2e-94 ureI S AmiS/UreI family transporter
APKDMPOB_01800 6e-46 yhaI L Membrane
APKDMPOB_01801 4.6e-84 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
APKDMPOB_01802 7.1e-75 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
APKDMPOB_01803 5.5e-105 V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
APKDMPOB_01804 9.4e-33 V protein secretion by the type I secretion system
APKDMPOB_01805 3.6e-160 K sequence-specific DNA binding
APKDMPOB_01806 4.6e-227 L Transposase
APKDMPOB_01807 2.9e-111 bcrC 3.6.1.27 I Membrane-associated phospholipid phosphatase
APKDMPOB_01808 1e-88 ribU U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
APKDMPOB_01809 1.6e-96 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
APKDMPOB_01810 5.5e-245 trkA P Potassium transporter peripheral membrane component
APKDMPOB_01811 1.8e-254 trkH P Cation transport protein
APKDMPOB_01812 4e-40 yidD S Could be involved in insertion of integral membrane proteins into the membrane
APKDMPOB_01813 6.1e-140 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
APKDMPOB_01814 3e-99 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
APKDMPOB_01815 2e-121 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
APKDMPOB_01816 7.5e-138 xerD L tyrosine recombinase. Not involved in the cutting and rejoining of the recombining DNA molecules on dif(SL) site
APKDMPOB_01817 2.1e-85 ykuL S CBS domain
APKDMPOB_01818 3.9e-98 XK27_09740 S Phosphoesterase
APKDMPOB_01819 1.9e-183 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
APKDMPOB_01820 2.4e-147 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
APKDMPOB_01821 2.2e-35 yneF S UPF0154 protein
APKDMPOB_01822 1.4e-50 K transcriptional regulator
APKDMPOB_01823 5.8e-241 lysA 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
APKDMPOB_01826 1.4e-234 L Transposase
APKDMPOB_01827 3.3e-97 ybhL S Belongs to the BI1 family
APKDMPOB_01828 4.6e-88 XK27_09705 6.1.1.14 S HD superfamily hydrolase
APKDMPOB_01829 6.4e-131 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
APKDMPOB_01830 4.1e-46 acyP 3.6.1.7 C Belongs to the acylphosphatase family
APKDMPOB_01831 1.8e-162 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
APKDMPOB_01832 1.9e-35 L Transposase and inactivated derivatives
APKDMPOB_01833 1e-76 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
APKDMPOB_01834 0.0 mltG ADL Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
APKDMPOB_01835 1.4e-50 XK27_09675 K -acetyltransferase
APKDMPOB_01836 2.4e-253 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
APKDMPOB_01837 4.1e-21
APKDMPOB_01838 0.0 snf 2.7.11.1 L Superfamily II DNA RNA helicases, SNF2 family'
APKDMPOB_01839 2.7e-287 mapZ D Early cell division protein that marks the future cell division site and supports proper FtsZ ring positioning
APKDMPOB_01840 7.9e-224 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
APKDMPOB_01841 5.1e-51 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
APKDMPOB_01842 4.9e-93 ypsA S Belongs to the UPF0398 family
APKDMPOB_01843 6.9e-107 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
APKDMPOB_01844 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
APKDMPOB_01845 3.3e-258 pepC 3.4.22.40 E aminopeptidase
APKDMPOB_01846 4.2e-77 yhaI L Membrane
APKDMPOB_01847 7.6e-149 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
APKDMPOB_01848 1.8e-273 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
APKDMPOB_01849 2.7e-197 S COG1073 Hydrolases of the alpha beta superfamily
APKDMPOB_01851 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
APKDMPOB_01852 1.5e-86 glcR K transcriptional regulator (DeoR family)
APKDMPOB_01853 1.9e-31 cof Q phosphatase activity
APKDMPOB_01854 7e-44 cof Q phosphatase activity
APKDMPOB_01855 2.1e-82 3.1.3.27, 3.1.3.4, 3.1.3.81, 3.6.1.27 I phosphatidate phosphatase activity
APKDMPOB_01856 4.2e-95 nusG K Participates in transcription elongation, termination and antitermination
APKDMPOB_01857 1.3e-24 secE U Belongs to the SecE SEC61-gamma family
APKDMPOB_01858 3.3e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
APKDMPOB_01859 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
APKDMPOB_01860 1.8e-164 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
APKDMPOB_01861 1.7e-54 S TM2 domain
APKDMPOB_01862 9.4e-44
APKDMPOB_01865 2.3e-26
APKDMPOB_01866 7.1e-34 L the current gene model (or a revised gene model) may contain a frame shift
APKDMPOB_01867 1.4e-19 L Transposase
APKDMPOB_01868 5.4e-69 L Transposase
APKDMPOB_01869 5e-135 1.6.5.5 C NADPH:quinone reductase activity
APKDMPOB_01870 1.9e-107 CP ABC-2 family transporter protein
APKDMPOB_01871 2.4e-135 V ABC transporter
APKDMPOB_01872 8.4e-17
APKDMPOB_01873 1.6e-70 nosF V abc transporter atp-binding protein
APKDMPOB_01875 3.9e-71
APKDMPOB_01876 9.4e-61 S very-long-chain-acyl-CoA dehydrogenase activity
APKDMPOB_01877 1.1e-38 3.5.2.6 V Beta-lactamase
APKDMPOB_01878 1.8e-09
APKDMPOB_01879 5.9e-28 K Transcriptional regulator
APKDMPOB_01880 7.2e-104 L Transposase
APKDMPOB_01881 1.6e-83 L Transposase
APKDMPOB_01882 1.2e-283 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
APKDMPOB_01883 1.7e-39 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
APKDMPOB_01884 3.7e-140 cmpC S abc transporter atp-binding protein
APKDMPOB_01885 0.0 WQ51_06230 S ABC transporter substrate binding protein
APKDMPOB_01886 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
APKDMPOB_01887 1e-229 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
APKDMPOB_01888 4.2e-144 cdsA 2.7.7.41 S Belongs to the CDS family
APKDMPOB_01889 1.2e-140 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
APKDMPOB_01890 2.2e-49 yajC U protein transport
APKDMPOB_01891 1.1e-124 yeeN K transcriptional regulatory protein
APKDMPOB_01892 2.2e-254 pgi 5.3.1.9 G Belongs to the GPI family
APKDMPOB_01893 9e-150 rgfB 3.1.3.90 L Endonuclease/Exonuclease/phosphatase family
APKDMPOB_01894 0.0 ptsG 2.7.1.199, 2.7.1.208 G pts system
APKDMPOB_01895 4e-162 mleP2 S Transporter, auxin efflux carrier (AEC) family protein
APKDMPOB_01896 1.1e-128 adcB P ABC transporter (Permease
APKDMPOB_01897 6e-134 adcC P ABC transporter, ATP-binding protein
APKDMPOB_01898 9.1e-72 adcR K transcriptional
APKDMPOB_01899 3.2e-223 EGP Major facilitator Superfamily
APKDMPOB_01900 0.0 KLT serine threonine protein kinase
APKDMPOB_01901 6e-128 K sequence-specific DNA binding
APKDMPOB_01902 1.1e-181 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
APKDMPOB_01903 5.6e-158 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
APKDMPOB_01905 8.1e-163 oppF P Belongs to the ABC transporter superfamily
APKDMPOB_01906 7.3e-189 oppD P Belongs to the ABC transporter superfamily
APKDMPOB_01907 1.2e-162 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
APKDMPOB_01908 2.4e-159 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
APKDMPOB_01909 4.1e-303 oppA E ABC transporter substrate-binding protein
APKDMPOB_01910 1.2e-271 sufB O assembly protein SufB
APKDMPOB_01911 1.4e-72 nifU C SUF system FeS assembly protein, NifU family
APKDMPOB_01912 5.5e-236 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
APKDMPOB_01913 2e-233 sufD O assembly protein SufD
APKDMPOB_01914 1.2e-143 sufC O ABC-type transport system involved in Fe-S cluster assembly, ATPase component
APKDMPOB_01915 6e-184 tagO 2.7.8.33, 2.7.8.35 M transferase
APKDMPOB_01916 8.3e-134 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
APKDMPOB_01917 9.1e-153 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
APKDMPOB_01918 2.9e-274 glnP P ABC transporter
APKDMPOB_01919 1e-123 glnQ E abc transporter atp-binding protein
APKDMPOB_01920 9.8e-41 D nuclear chromosome segregation
APKDMPOB_01921 1e-130 D nuclear chromosome segregation
APKDMPOB_01923 8.8e-91 V VanZ like family
APKDMPOB_01924 5.4e-43 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
APKDMPOB_01925 5.1e-199 yhjX P Major Facilitator
APKDMPOB_01926 3.5e-109 fnr5 K Catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
APKDMPOB_01927 6.2e-111 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
APKDMPOB_01928 7.3e-236 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
APKDMPOB_01929 5.7e-25 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
APKDMPOB_01930 1.4e-07 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
APKDMPOB_01931 7.2e-37 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
APKDMPOB_01932 2e-27 dex 3.2.1.11 GH66 G Glycosyl hydrolase family 66
APKDMPOB_01933 2.2e-73 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
APKDMPOB_01934 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
APKDMPOB_01935 2.6e-82 nrdI F Belongs to the NrdI family
APKDMPOB_01936 0.0 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
APKDMPOB_01937 1.2e-132 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
APKDMPOB_01938 8e-174 prmA J Ribosomal protein L11 methyltransferase
APKDMPOB_01939 8.5e-78 mutT3 3.6.1.13, 3.6.1.55 L NUDIX domain
APKDMPOB_01940 6e-82 XK27_03960 S Protein of unknown function (DUF3013)
APKDMPOB_01941 1.6e-307 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
APKDMPOB_01942 1.1e-72 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
APKDMPOB_01943 3.9e-216 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
APKDMPOB_01944 1.1e-145 ykuT M mechanosensitive ion channel
APKDMPOB_01945 1.6e-77 sigH K DNA-templated transcription, initiation
APKDMPOB_01946 6.1e-216 L Transposase
APKDMPOB_01947 6.9e-234 L Transposase
APKDMPOB_01950 4.1e-70 hmpT S cog cog4720
APKDMPOB_01951 6.2e-137 thiD 2.7.1.35, 2.7.1.49, 2.7.4.7 H phosphomethylpyrimidine kinase
APKDMPOB_01952 4.2e-138 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
APKDMPOB_01953 5.7e-182 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
APKDMPOB_01954 4.2e-280 dnaK O Heat shock 70 kDa protein
APKDMPOB_01955 1.2e-52 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
APKDMPOB_01956 1e-193 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
APKDMPOB_01957 1.4e-234 L Transposase
APKDMPOB_01958 3.7e-70 acmA 3.2.1.17 NU amidase activity
APKDMPOB_01959 1.5e-138 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
APKDMPOB_01960 1.2e-129 ais G Phosphoglycerate mutase
APKDMPOB_01961 8.7e-243 XK27_08635 S UPF0210 protein
APKDMPOB_01962 6.1e-39 gcvR T UPF0237 protein
APKDMPOB_01963 5.3e-223 capA M Bacterial capsule synthesis protein
APKDMPOB_01964 1.2e-52
APKDMPOB_01965 0.0 mycA 4.2.1.53 S MCRA family
APKDMPOB_01966 1.1e-26 S Membrane
APKDMPOB_01967 4.5e-100
APKDMPOB_01968 6.7e-23 S Small integral membrane protein
APKDMPOB_01969 5.6e-74 M Protein conserved in bacteria
APKDMPOB_01970 5e-09 K CsbD-like
APKDMPOB_01972 4.5e-14 K LytTr DNA-binding domain
APKDMPOB_01973 3.4e-24 V ABC transporter (permease)
APKDMPOB_01974 9e-22 V ABC transporter (permease)
APKDMPOB_01975 3.6e-56 V ABC transporter, ATP-binding protein
APKDMPOB_01976 1.6e-20
APKDMPOB_01977 1.1e-75 sagB C Nitroreductase family
APKDMPOB_01978 2.7e-84 S YcaO cyclodehydratase, ATP-ad Mg2+-binding
APKDMPOB_01979 2.5e-32 S YcaO cyclodehydratase, ATP-ad Mg2+-binding
APKDMPOB_01980 7.6e-46
APKDMPOB_01981 4.6e-15
APKDMPOB_01982 5.1e-09
APKDMPOB_01983 3.6e-224 L Transposase
APKDMPOB_01984 2.4e-64 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
APKDMPOB_01985 4.8e-50 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
APKDMPOB_01986 6.6e-218 opuCA 2.7.7.7 E abc transporter atp-binding protein
APKDMPOB_01987 5.9e-115 opuCB P ABC transporter
APKDMPOB_01988 3.5e-118 opuCC P ABC-type proline glycine betaine transport systems, permease component
APKDMPOB_01989 7.2e-113 opuCD P ABC-type proline glycine betaine transport systems permease component
APKDMPOB_01990 7.2e-71 yvdD 3.2.2.10 L Belongs to the LOG family
APKDMPOB_01991 4.5e-88 2.3.1.128 K Acetyltransferase GNAT Family
APKDMPOB_01992 7.9e-224 L Transposase
APKDMPOB_01993 7.9e-199 L DNA integration
APKDMPOB_01994 5.3e-164 fba 4.1.2.13, 4.1.2.29 G aldolase
APKDMPOB_01996 9.8e-128 6.3.2.2 H gamma-glutamylcysteine synthetase
APKDMPOB_01997 4.8e-40 6.3.2.2 H gamma-glutamylcysteine synthetase
APKDMPOB_01998 3.1e-38 L PFAM Integrase, catalytic core
APKDMPOB_01999 5.7e-45 L PFAM Integrase, catalytic core
APKDMPOB_02000 4.8e-51 L PFAM Integrase, catalytic core
APKDMPOB_02001 1.3e-61 rplQ J ribosomal protein l17
APKDMPOB_02002 7.6e-169 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
APKDMPOB_02003 9.6e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
APKDMPOB_02004 4e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
APKDMPOB_02005 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
APKDMPOB_02006 2.7e-32 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
APKDMPOB_02007 1.8e-116 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
APKDMPOB_02008 2.1e-230 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
APKDMPOB_02009 4.4e-58 rplO J binds to the 23S rRNA
APKDMPOB_02010 2.5e-23 rpmD J ribosomal protein l30
APKDMPOB_02011 1.7e-79 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
APKDMPOB_02012 1.1e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
APKDMPOB_02013 2.3e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
APKDMPOB_02014 1.2e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
APKDMPOB_02015 2.4e-26 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
APKDMPOB_02016 1.2e-94 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
APKDMPOB_02017 1.1e-47 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
APKDMPOB_02018 1.1e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
APKDMPOB_02019 6e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
APKDMPOB_02020 2.1e-26 rpmC J Belongs to the universal ribosomal protein uL29 family
APKDMPOB_02021 1.5e-68 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
APKDMPOB_02022 8.3e-114 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
APKDMPOB_02023 1.3e-52 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
APKDMPOB_02024 8.3e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
APKDMPOB_02025 6.3e-151 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
APKDMPOB_02026 2.4e-44 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
APKDMPOB_02027 5.7e-104 rplD J Forms part of the polypeptide exit tunnel
APKDMPOB_02028 2e-109 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
APKDMPOB_02029 4.1e-47 rpsJ J Involved in the binding of tRNA to the ribosomes
APKDMPOB_02030 7.3e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
APKDMPOB_02031 0.0 XK27_09800 I Acyltransferase
APKDMPOB_02032 1.7e-35 XK27_09805 S MORN repeat protein
APKDMPOB_02033 1.8e-80 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
APKDMPOB_02034 2.5e-247 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
APKDMPOB_02035 7.9e-224 L Transposase
APKDMPOB_02036 1e-48 adk 2.7.4.3 F topology modulation protein
APKDMPOB_02038 5.7e-236 rarA L ATPase related to the helicase subunit of the Holliday junction resolvase
APKDMPOB_02039 1.9e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
APKDMPOB_02040 2.2e-44 yrzL S Belongs to the UPF0297 family
APKDMPOB_02041 1.2e-70 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
APKDMPOB_02042 4.2e-44 yrzB S Belongs to the UPF0473 family
APKDMPOB_02043 1.4e-234 L Transposase
APKDMPOB_02044 2.6e-297 ccs S the current gene model (or a revised gene model) may contain a frame shift
APKDMPOB_02045 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
APKDMPOB_02046 2.8e-13
APKDMPOB_02047 1.2e-88 XK27_10930 K acetyltransferase
APKDMPOB_02048 3.1e-115 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
APKDMPOB_02049 1.2e-146 yaaA S Belongs to the UPF0246 family
APKDMPOB_02050 3.8e-168 XK27_01785 S cog cog1284
APKDMPOB_02051 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
APKDMPOB_02053 3e-240 hisS 6.1.1.21 J histidyl-tRNA synthetase
APKDMPOB_02054 9.2e-214 metE 2.1.1.14 E Methionine synthase
APKDMPOB_02055 2.9e-24 rpmF J Belongs to the bacterial ribosomal protein bL32 family
APKDMPOB_02056 6.7e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
APKDMPOB_02057 1e-260 dam 2.1.1.72 L D12 class N6 adenine-specific DNA methyltransferase
APKDMPOB_02058 5.1e-235 L Restriction endonuclease FokI, C terminal
APKDMPOB_02059 3.4e-75 E IrrE N-terminal-like domain
APKDMPOB_02060 4.8e-29
APKDMPOB_02061 2.9e-36
APKDMPOB_02062 1.7e-220 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
APKDMPOB_02063 1.4e-84 K Peptidase S24-like protein
APKDMPOB_02064 1.6e-34
APKDMPOB_02068 4e-27 K Helix-turn-helix XRE-family like proteins
APKDMPOB_02070 3.3e-33
APKDMPOB_02071 7e-51
APKDMPOB_02072 2.8e-206 ydcQ D Ftsk spoiiie family protein
APKDMPOB_02073 1.3e-173 K Replication initiation factor
APKDMPOB_02074 1.6e-27
APKDMPOB_02075 3.3e-36
APKDMPOB_02076 1.2e-82 S Conjugative transposon protein TcpC
APKDMPOB_02077 7.7e-27
APKDMPOB_02078 1.4e-58 S TcpE family
APKDMPOB_02079 0.0 yddE S the current gene model (or a revised gene model) may contain a frame shift
APKDMPOB_02080 9e-201
APKDMPOB_02081 5.2e-15
APKDMPOB_02082 2.5e-147 S pathogenesis
APKDMPOB_02083 1.6e-20 S MerR HTH family regulatory protein
APKDMPOB_02084 1.3e-163 sip L Phage integrase, N-terminal SAM-like domain
APKDMPOB_02087 2.3e-115 yegS 2.7.1.107 I Diacylglycerol kinase
APKDMPOB_02088 2.9e-15 yegS 2.7.1.107 I Diacylglycerol kinase
APKDMPOB_02089 1.3e-77 S Hydrophobic domain protein
APKDMPOB_02092 1.1e-26 S Membrane
APKDMPOB_02093 4.5e-100
APKDMPOB_02094 6.7e-23 S Small integral membrane protein
APKDMPOB_02095 5.6e-74 M Protein conserved in bacteria
APKDMPOB_02096 5e-09 K CsbD-like
APKDMPOB_02097 2.6e-77 nudL L hydrolase
APKDMPOB_02098 7e-12 K negative regulation of transcription, DNA-templated
APKDMPOB_02100 9.4e-61 S Putative adhesin
APKDMPOB_02101 1.5e-21 S Putative adhesin
APKDMPOB_02102 1.9e-155 XK27_06930 V domain protein
APKDMPOB_02103 3.5e-94 XK27_06935 K transcriptional regulator
APKDMPOB_02104 1.8e-13 ypaA M Membrane
APKDMPOB_02108 4.4e-18 yjgN S membrane
APKDMPOB_02109 3.7e-27 S Transcriptional regulator, RinA family
APKDMPOB_02115 6.5e-266
APKDMPOB_02116 3.8e-13
APKDMPOB_02117 6.7e-17
APKDMPOB_02118 3.4e-12 K Helix-turn-helix
APKDMPOB_02119 1.4e-12 K sequence-specific DNA binding
APKDMPOB_02120 6.4e-141 sip L Phage integrase, N-terminal SAM-like domain
APKDMPOB_02121 4.9e-108 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
APKDMPOB_02122 2.4e-47 veg S Biofilm formation stimulator VEG
APKDMPOB_02123 2.1e-244 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
APKDMPOB_02124 8.5e-73 rplI J binds to the 23S rRNA
APKDMPOB_02125 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
APKDMPOB_02126 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
APKDMPOB_02127 4e-217 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
APKDMPOB_02128 0.0 S Bacterial membrane protein, YfhO
APKDMPOB_02129 1.8e-89 isaA GH23 M Immunodominant staphylococcal antigen A
APKDMPOB_02130 8.4e-75 lytE M LysM domain protein
APKDMPOB_02131 3.8e-137 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
APKDMPOB_02132 1.3e-151 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
APKDMPOB_02133 3.1e-150 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
APKDMPOB_02134 5.5e-87 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
APKDMPOB_02135 8.9e-132 ymfM S sequence-specific DNA binding
APKDMPOB_02136 1.2e-154 ymfH S Peptidase M16
APKDMPOB_02137 1.5e-71 ymfH S Peptidase M16
APKDMPOB_02138 1e-229 ymfF S Peptidase M16
APKDMPOB_02139 2.9e-42 yaaA S S4 domain protein YaaA
APKDMPOB_02140 5e-196 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
APKDMPOB_02141 1.2e-274 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
APKDMPOB_02142 1.2e-191 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
APKDMPOB_02143 3.3e-150 yvjA S membrane
APKDMPOB_02144 2e-302 ybiT S abc transporter atp-binding protein
APKDMPOB_02145 0.0 XK27_10405 S Bacterial membrane protein YfhO
APKDMPOB_02149 2.7e-115 yoaK S Protein of unknown function (DUF1275)
APKDMPOB_02150 8e-85 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
APKDMPOB_02151 4.9e-184 htrA 3.4.21.107 O Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain'
APKDMPOB_02152 1.6e-132 parB K Belongs to the ParB family
APKDMPOB_02154 5.2e-181 L Replication protein
APKDMPOB_02155 4.2e-159 L Replication protein

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)