ORF_ID e_value Gene_name EC_number CAZy COGs Description
PEBIFDJM_00005 2e-08
PEBIFDJM_00012 1.3e-09
PEBIFDJM_00013 7.8e-08
PEBIFDJM_00022 0.0 glgB 2.4.1.18, 3.2.1.141, 3.2.1.20 CBM48,GH13,GH31 G Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
PEBIFDJM_00023 2.6e-195 glgC 2.7.7.27 G Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
PEBIFDJM_00024 2.9e-177 glgD 2.4.1.21, 2.7.7.27 GT5 G Glucose-1-phosphate adenylyltransferase, GlgD subunit
PEBIFDJM_00025 2.7e-282 glgA 2.4.1.21 GT5 G Synthesizes alpha-1,4-glucan chains using ADP-glucose
PEBIFDJM_00026 0.0 glgP 2.4.1.1 GT35 G Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties
PEBIFDJM_00027 3.8e-76 tspO T membrane
PEBIFDJM_00028 5.7e-205 cotI S Spore coat protein
PEBIFDJM_00029 4.1e-217 cotSA M Glycosyl transferases group 1
PEBIFDJM_00030 4.3e-205 cotS S Seems to be required for the assembly of the CotSA protein in spores
PEBIFDJM_00032 3.6e-235 ytcC M Glycosyltransferase Family 4
PEBIFDJM_00033 3.3e-180 ytcB 5.1.3.2 M NAD-dependent epimerase dehydratase
PEBIFDJM_00034 2.9e-243 ugd 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PEBIFDJM_00035 1e-153 galU 2.7.7.9 M Nucleotidyl transferase
PEBIFDJM_00036 4.4e-132 dksA T COG1734 DnaK suppressor protein
PEBIFDJM_00037 2.5e-272 menF 5.4.4.2 HQ Isochorismate synthase
PEBIFDJM_00038 0.0 menD 2.2.1.9 H Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
PEBIFDJM_00039 3.2e-155 menH 4.2.99.20 S Catalyzes a proton abstraction reaction that results in 2,5-elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6- hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC)
PEBIFDJM_00040 4.2e-155 menB 4.1.3.36 H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
PEBIFDJM_00041 2.2e-276 menE 6.2.1.26 H Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily
PEBIFDJM_00042 5.4e-214 menC 4.2.1.113 H Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB)
PEBIFDJM_00043 2e-169 troA P Belongs to the bacterial solute-binding protein 9 family
PEBIFDJM_00044 2.1e-137 mntB P 'COG1121 ABC-type Mn Zn transport systems, ATPase component'
PEBIFDJM_00045 1.1e-231 mntC P COG1108 ABC-type Mn2 Zn2 transport systems, permease components
PEBIFDJM_00046 8.3e-149 troD P 'COG1108 ABC-type Mn2 Zn2 transport systems, permease components'
PEBIFDJM_00047 1.1e-24 S Domain of Unknown Function (DUF1540)
PEBIFDJM_00048 1.1e-187 cydB 1.10.3.14 C COG1294 Cytochrome bd-type quinol oxidase, subunit 2
PEBIFDJM_00049 1.1e-248 cydA 1.10.3.14 C oxidase, subunit
PEBIFDJM_00050 3.6e-41 rpmE2 J Ribosomal protein L31
PEBIFDJM_00051 9.7e-103 ytiB 4.2.1.1 P Reversible hydration of carbon dioxide
PEBIFDJM_00052 1.6e-87 luxS 4.4.1.21 T Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
PEBIFDJM_00053 1.1e-72 ytkA S YtkA-like
PEBIFDJM_00055 2.1e-76 dps P Belongs to the Dps family
PEBIFDJM_00056 7.8e-62 ytkC S Bacteriophage holin family
PEBIFDJM_00057 2.8e-87 ytkD 3.6.1.55 L Belongs to the Nudix hydrolase family
PEBIFDJM_00058 1.2e-141 ytlD P COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
PEBIFDJM_00059 1.4e-144 ytlC P ABC transporter
PEBIFDJM_00060 2e-186 ytlA P COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components
PEBIFDJM_00061 2.7e-148 ytmA E COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases
PEBIFDJM_00062 1.6e-38 ytmB S Protein of unknown function (DUF2584)
PEBIFDJM_00063 8.8e-311 pckA 4.1.1.49 C Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
PEBIFDJM_00064 4.3e-225 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
PEBIFDJM_00065 0.0 asnB 6.3.5.4 E Asparagine synthase
PEBIFDJM_00066 8.4e-257 ytnA E COG1113 Gamma-aminobutyrate permease and related permeases
PEBIFDJM_00067 1.6e-59 ytoA S COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
PEBIFDJM_00068 3.3e-149 ytpA 3.1.1.5 I Alpha beta hydrolase
PEBIFDJM_00069 1.8e-214 ytpB 4.2.3.130 S Tetraprenyl-beta-curcumene synthase
PEBIFDJM_00070 7.4e-106 ytqB J Putative rRNA methylase
PEBIFDJM_00071 4e-189 yhcC S Fe-S oxidoreductase
PEBIFDJM_00072 6.7e-41 ytzC S Protein of unknown function (DUF2524)
PEBIFDJM_00074 5.1e-66 ytrA K GntR family transcriptional regulator
PEBIFDJM_00075 4.2e-161 ytrB P abc transporter atp-binding protein
PEBIFDJM_00076 4.7e-161 P ABC-2 family transporter protein
PEBIFDJM_00077 1.8e-149
PEBIFDJM_00078 7e-127 ytrE V ABC transporter, ATP-binding protein
PEBIFDJM_00079 1.6e-233 ytrF V COG0577 ABC-type antimicrobial peptide transport system, permease component
PEBIFDJM_00080 1.1e-129 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PEBIFDJM_00081 4e-184 T PhoQ Sensor
PEBIFDJM_00082 1.1e-138 bceA V ABC transporter, ATP-binding protein
PEBIFDJM_00083 0.0 bceB V ABC transporter (permease)
PEBIFDJM_00084 1.3e-41 yttA 2.7.13.3 S Pfam Transposase IS66
PEBIFDJM_00085 7.3e-209 yttB EGP Major facilitator Superfamily
PEBIFDJM_00086 3.9e-142 pfyP T Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
PEBIFDJM_00087 7.7e-55 ytvB S Protein of unknown function (DUF4257)
PEBIFDJM_00088 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
PEBIFDJM_00089 2.1e-51 ytwF P Sulfurtransferase
PEBIFDJM_00090 4e-253 melA 3.2.1.122, 3.2.1.22, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase
PEBIFDJM_00091 3.7e-143 amyC P ABC transporter (permease)
PEBIFDJM_00092 1.4e-167 amyD P ABC transporter
PEBIFDJM_00093 2.8e-246 msmE G Bacterial extracellular solute-binding protein
PEBIFDJM_00094 4.3e-189 msmR K Transcriptional regulator
PEBIFDJM_00095 4.1e-172 ytaP S Acetyl xylan esterase (AXE1)
PEBIFDJM_00096 6.4e-139 bioW 2.3.1.47, 6.2.1.14 H Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP
PEBIFDJM_00097 1.7e-259 bioA 2.6.1.105, 2.6.1.62 H Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor
PEBIFDJM_00098 2.5e-217 bioF 2.3.1.29, 2.3.1.47, 6.2.1.14 H Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
PEBIFDJM_00099 3.5e-126 bioD 6.3.3.3 H Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
PEBIFDJM_00100 8.4e-190 bioB 2.8.1.6 H Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
PEBIFDJM_00101 2.2e-221 bioI 1.14.14.46 C Cytochrome P450
PEBIFDJM_00102 9.6e-138 udh 1.1.1.203, 1.1.1.388 GM NAD dependent epimerase/dehydratase family
PEBIFDJM_00103 1.5e-150 ytcP G COG0395 ABC-type sugar transport system, permease component
PEBIFDJM_00104 6.2e-290 ytcQ G COG1653 ABC-type sugar transport system, periplasmic component
PEBIFDJM_00105 0.0 ytdP K Transcriptional regulator
PEBIFDJM_00106 7.5e-172 lplB G COG4209 ABC-type polysaccharide transport system, permease component
PEBIFDJM_00107 1.6e-218 yteR 3.2.1.172 GH105 G unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins
PEBIFDJM_00108 1.3e-72 yteS G transport
PEBIFDJM_00109 7.8e-257 yteT S Oxidoreductase family, C-terminal alpha/beta domain
PEBIFDJM_00110 4.5e-115 yteU S Integral membrane protein
PEBIFDJM_00111 3.1e-26 yteV S Sporulation protein Cse60
PEBIFDJM_00112 1.3e-282 opuD M Belongs to the BCCT transporter (TC 2.A.15) family
PEBIFDJM_00113 8.2e-232 ytfP S HI0933-like protein
PEBIFDJM_00114 2.1e-280 ytgP S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PEBIFDJM_00115 1.3e-131 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PEBIFDJM_00116 2.4e-33 ytzE K COG1349 Transcriptional regulators of sugar metabolism
PEBIFDJM_00117 4.8e-131 ythP V ABC transporter
PEBIFDJM_00118 2.4e-204 ythQ U Bacterial ABC transporter protein EcsB
PEBIFDJM_00119 2.1e-225 pbuO S permease
PEBIFDJM_00120 2.7e-271 pepV 3.5.1.18 E Dipeptidase
PEBIFDJM_00121 8.6e-173 ytkP 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PEBIFDJM_00122 2.3e-101 ligT 3.1.4.58, 3.5.1.42 J Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
PEBIFDJM_00123 2.5e-164 ytlQ
PEBIFDJM_00124 2.9e-181 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
PEBIFDJM_00125 0.0 pulA 3.2.1.41 CBM48,GH13 G Belongs to the glycosyl hydrolase 13 family
PEBIFDJM_00126 6.1e-151 ytmP 2.7.1.89 M Phosphotransferase
PEBIFDJM_00127 2e-45 ytzH S YtzH-like protein
PEBIFDJM_00128 2e-120 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
PEBIFDJM_00129 6.4e-151 ytnP S COG0491 Zn-dependent hydrolases, including glyoxylases
PEBIFDJM_00130 0.0 sfcA 1.1.1.38 C Malate dehydrogenase
PEBIFDJM_00131 1.1e-50 ytzB S small secreted protein
PEBIFDJM_00132 1.4e-206 pepA 3.4.11.7 G COG1363 Cellulase M and related proteins
PEBIFDJM_00133 5.9e-79 ytoQ S Nucleoside 2-deoxyribosyltransferase YtoQ
PEBIFDJM_00134 2.1e-57 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PEBIFDJM_00135 9.8e-149 ytpQ S Belongs to the UPF0354 family
PEBIFDJM_00136 9.7e-109 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PEBIFDJM_00137 0.0 sftA D Belongs to the FtsK SpoIIIE SftA family
PEBIFDJM_00138 1.6e-254 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
PEBIFDJM_00139 2.1e-17 ytxG S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
PEBIFDJM_00140 6.6e-17 ytxH S COG4980 Gas vesicle protein
PEBIFDJM_00141 6.3e-54 ytxJ O Protein of unknown function (DUF2847)
PEBIFDJM_00142 4.9e-196 aroF 2.5.1.54, 5.4.99.5 E Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate
PEBIFDJM_00143 1.7e-182 ccpA K catabolite control protein A
PEBIFDJM_00144 6e-146 motA N flagellar motor
PEBIFDJM_00145 2.3e-125 motS N Flagellar motor protein
PEBIFDJM_00146 5.4e-225 acuC BQ histone deacetylase
PEBIFDJM_00147 1.6e-117 acuB S Domain in cystathionine beta-synthase and other proteins.
PEBIFDJM_00148 1.8e-121 acuA K Part of the acuABC operon, which is possibly involved in the breakdown of acetoin and butanediol. Acts as an acetyltransferase inactivating acetyl-CoA synthetase AcsA via acetylation at a Lys residue
PEBIFDJM_00149 0.0 acsA 6.2.1.1 I COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
PEBIFDJM_00150 1.8e-237 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PEBIFDJM_00152 2.5e-109 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
PEBIFDJM_00153 1e-307 ytrP 2.7.7.65 T COG2199 FOG GGDEF domain
PEBIFDJM_00154 2e-88 ytsP 1.8.4.14 T GAF domain-containing protein
PEBIFDJM_00155 6.5e-108 yttP K Transcriptional regulator
PEBIFDJM_00156 1.6e-154 hisK 3.1.3.15 E COG1387 Histidinol phosphatase and related hydrolases of the PHP family
PEBIFDJM_00157 9.2e-274 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
PEBIFDJM_00158 4.9e-238 brnQ E Component of the transport system for branched-chain amino acids
PEBIFDJM_00159 5.6e-206 iscS2 2.8.1.7 E Cysteine desulfurase
PEBIFDJM_00160 8.7e-226 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
PEBIFDJM_00161 2e-29 sspB S spore protein
PEBIFDJM_00162 1e-306 acsA 6.2.1.1, 6.2.1.2 I COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases
PEBIFDJM_00163 0.0 ytcJ S amidohydrolase
PEBIFDJM_00164 2.2e-148 nadK 2.7.1.23 G Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PEBIFDJM_00165 1.6e-180 sppA OU signal peptide peptidase SppA
PEBIFDJM_00166 1.5e-86 yteJ S RDD family
PEBIFDJM_00167 5.6e-116 ytfI S Protein of unknown function (DUF2953)
PEBIFDJM_00168 8.7e-70 ytfJ S Sporulation protein YtfJ
PEBIFDJM_00169 2.4e-89 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
PEBIFDJM_00170 7e-165 ytxK 2.1.1.72 L DNA methylase
PEBIFDJM_00171 3.7e-221 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
PEBIFDJM_00172 3.6e-88 moaB 2.7.7.75 H May be involved in the biosynthesis of molybdopterin
PEBIFDJM_00173 2.3e-234 argG 6.3.4.5 E Belongs to the argininosuccinate synthase family. Type 1 subfamily
PEBIFDJM_00174 3.4e-266 argH 4.3.2.1 E argininosuccinate lyase
PEBIFDJM_00176 1.1e-141 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PEBIFDJM_00177 1.7e-130 ytkL S Belongs to the UPF0173 family
PEBIFDJM_00178 1.2e-171 ytlI K LysR substrate binding domain
PEBIFDJM_00179 1.2e-99 ytmI K Acetyltransferase (GNAT) domain
PEBIFDJM_00180 2.1e-151 tcyK ET Bacterial periplasmic substrate-binding proteins
PEBIFDJM_00181 6.4e-148 tcyK M Bacterial periplasmic substrate-binding proteins
PEBIFDJM_00182 1.4e-122 tcyL P Binding-protein-dependent transport system inner membrane component
PEBIFDJM_00183 1.6e-118 tcyM U Binding-protein-dependent transport system inner membrane component
PEBIFDJM_00184 3.9e-142 tcyN 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
PEBIFDJM_00185 4.9e-182 ytmO C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PEBIFDJM_00186 2.1e-45 ytnI O COG0695 Glutaredoxin and related proteins
PEBIFDJM_00187 2.6e-255 moxC C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PEBIFDJM_00188 9e-127 ribF 2.7.1.26, 2.7.7.2 H Riboflavin kinase
PEBIFDJM_00189 1e-237 ytnL 3.5.1.47 E hydrolase activity
PEBIFDJM_00190 1.2e-158 ytnM S membrane transporter protein
PEBIFDJM_00191 8e-241 ytoI K transcriptional regulator containing CBS domains
PEBIFDJM_00192 2.4e-47 ytpI S YtpI-like protein
PEBIFDJM_00193 7.8e-182 nrnA 3.1.13.3, 3.1.3.7 S COG0618 Exopolyphosphatase-related proteins
PEBIFDJM_00194 9.2e-29
PEBIFDJM_00195 8.2e-69 ytrI
PEBIFDJM_00196 3.2e-56 ytrH S Sporulation protein YtrH
PEBIFDJM_00197 0.0 dnaE 2.7.7.7 L DNA polymerase
PEBIFDJM_00198 1.5e-225 ytsJ 1.1.1.38 C Malate dehydrogenase
PEBIFDJM_00199 2.1e-160 accD 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
PEBIFDJM_00200 4.3e-183 accA 2.1.3.15, 6.4.1.2 I Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA
PEBIFDJM_00201 1.3e-179 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
PEBIFDJM_00202 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
PEBIFDJM_00203 8.7e-63 fxsA S COG3030 Protein affecting phage T7 exclusion by the F plasmid
PEBIFDJM_00204 2.6e-192 ytvI S sporulation integral membrane protein YtvI
PEBIFDJM_00205 2.3e-70 yeaL S membrane
PEBIFDJM_00206 4.7e-210 citZ 2.3.3.1 C Belongs to the citrate synthase family
PEBIFDJM_00207 4.1e-242 icd 1.1.1.42 C isocitrate
PEBIFDJM_00208 3.1e-170 mdh 1.1.1.37 C Catalyzes the reversible oxidation of malate to oxaloacetate
PEBIFDJM_00209 2.2e-131 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PEBIFDJM_00210 0.0 phoR 2.7.13.3 T Signal transduction histidine kinase
PEBIFDJM_00211 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
PEBIFDJM_00212 7.8e-157 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
PEBIFDJM_00213 1.1e-107 ytaF P Probably functions as a manganese efflux pump
PEBIFDJM_00214 3.8e-97 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
PEBIFDJM_00215 8.9e-161 ytbE S reductase
PEBIFDJM_00216 2.5e-201 ytbD EGP Major facilitator Superfamily
PEBIFDJM_00217 9.9e-67 ytcD K Transcriptional regulator
PEBIFDJM_00218 3.7e-193 gapB 1.2.1.12, 1.2.1.59 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PEBIFDJM_00219 2e-67 speH 4.1.1.50 E Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
PEBIFDJM_00220 1.1e-80 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
PEBIFDJM_00221 1.5e-264 dnaB L Membrane attachment protein
PEBIFDJM_00222 3e-173 dnaI L Primosomal protein DnaI
PEBIFDJM_00223 4.9e-111 ytxB S SNARE associated Golgi protein
PEBIFDJM_00224 3.8e-159 ytxC S YtxC-like family
PEBIFDJM_00226 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PEBIFDJM_00227 2.8e-148 ysaA S HAD-hyrolase-like
PEBIFDJM_00228 0.0 lytS 2.7.13.3 T Histidine kinase
PEBIFDJM_00229 7e-130 lytT T COG3279 Response regulator of the LytR AlgR family
PEBIFDJM_00230 1.1e-48 lrgA S Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgB, with the holin-like protein CidA. The LrgAB and CidA proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses
PEBIFDJM_00231 2.4e-111 lrgB M Inhibits the expression or activity of extracellular murein hydrolases by interacting, possibly with LrgA, with the holin-like protein CidA. The LrgAB and CidA proteins may affect the proton motive force of the membrane. May be involved in programmed cell death (PCD), possibly triggering PCD in response to antibiotics and environmental stresses
PEBIFDJM_00233 3.3e-86 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
PEBIFDJM_00234 9e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
PEBIFDJM_00235 3.6e-58 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
PEBIFDJM_00236 7.5e-45 ysdA S Membrane
PEBIFDJM_00237 3.5e-67 ysdB S Sigma-w pathway protein YsdB
PEBIFDJM_00238 4.5e-205 ysdC G COG1363 Cellulase M and related proteins
PEBIFDJM_00239 1.2e-188 abnA 3.2.1.99 GH43 G Belongs to the glycosyl hydrolase 43 family
PEBIFDJM_00240 1.5e-291 araA 5.3.1.4 G Catalyzes the conversion of L-arabinose to L-ribulose
PEBIFDJM_00241 0.0 araB 2.7.1.16 C Belongs to the ribulokinase family
PEBIFDJM_00242 5.5e-132 araD 4.1.2.17, 4.2.1.109, 5.1.3.4 G COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
PEBIFDJM_00243 6e-146 araL 3.1.3.41 G Haloacid dehalogenase-like hydrolase
PEBIFDJM_00244 1.8e-220 egsA 1.1.1.261 I Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species
PEBIFDJM_00245 3.1e-253 araN G carbohydrate transport
PEBIFDJM_00246 4.2e-167 araP G carbohydrate transport
PEBIFDJM_00247 3.8e-143 araQ G transport system permease
PEBIFDJM_00248 2.5e-299 abfA 3.2.1.55 GH51 G alpha-L-arabinofuranosidase activity
PEBIFDJM_00249 0.0 cstA T Carbon starvation protein
PEBIFDJM_00251 2.8e-53 ysfE 4.4.1.5 E Glyoxalase-like domain
PEBIFDJM_00252 1.5e-255 glcF C Glycolate oxidase
PEBIFDJM_00253 8.8e-262 glcD 1.1.3.15 C Glycolate oxidase subunit
PEBIFDJM_00254 4.4e-208 ysfB KT regulator
PEBIFDJM_00255 5.8e-32 sspI S Belongs to the SspI family
PEBIFDJM_00256 2.2e-131 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PEBIFDJM_00257 8e-196 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
PEBIFDJM_00258 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
PEBIFDJM_00259 2.4e-167 rnhC 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PEBIFDJM_00260 2.4e-40 zapA D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
PEBIFDJM_00261 1.3e-85 cvpA S membrane protein, required for colicin V production
PEBIFDJM_00262 0.0 polX L COG1796 DNA polymerase IV (family X)
PEBIFDJM_00263 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
PEBIFDJM_00264 7.3e-68 yshE S membrane
PEBIFDJM_00265 0.0 lcfA 6.2.1.3 IQ COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
PEBIFDJM_00266 2.7e-100 fadR K Transcriptional regulator
PEBIFDJM_00267 7e-136 fadB 4.2.1.17 I Belongs to the enoyl-CoA hydratase isomerase family
PEBIFDJM_00268 4.5e-135 etfB C Electron transfer flavoprotein
PEBIFDJM_00269 2.7e-177 etfA C Electron transfer flavoprotein
PEBIFDJM_00271 2.4e-302 xsa 3.2.1.55 GH51 G Alpha-L-arabinofuranosidase C-terminus
PEBIFDJM_00272 2e-52 trxA O Belongs to the thioredoxin family
PEBIFDJM_00273 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
PEBIFDJM_00274 6.3e-216 lysC 1.1.1.3, 2.7.2.4 E Belongs to the aspartokinase family
PEBIFDJM_00275 1.2e-79 yslB S Protein of unknown function (DUF2507)
PEBIFDJM_00276 2.4e-107 sdhC C succinate dehydrogenase
PEBIFDJM_00277 0.0 sdhA 1.3.5.1, 1.3.5.4 C succinate dehydrogenase
PEBIFDJM_00278 1.7e-147 sdhB 1.3.5.1, 1.3.5.4 C succinate dehydrogenase
PEBIFDJM_00279 6.5e-78 ybgC 3.1.2.23, 3.1.2.28 S thioesterase
PEBIFDJM_00280 3.3e-30 gerE K Transcriptional regulator
PEBIFDJM_00281 2.3e-75 ysmB 2.4.2.28 K helix_turn_helix multiple antibiotic resistance protein
PEBIFDJM_00282 8.1e-151 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PEBIFDJM_00283 9.4e-195 gerM S COG5401 Spore germination protein
PEBIFDJM_00284 1.8e-133 rph 2.7.7.56, 3.6.1.66 J Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
PEBIFDJM_00285 7.7e-103 rdgB 3.6.1.66 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
PEBIFDJM_00286 5.3e-92 ysnB S Phosphoesterase
PEBIFDJM_00288 1e-89 L Phage integrase family
PEBIFDJM_00290 1.1e-39 S Helix-turn-helix domain
PEBIFDJM_00291 4.6e-41
PEBIFDJM_00294 1e-15
PEBIFDJM_00295 1.2e-32
PEBIFDJM_00297 4.8e-108 L DNA-dependent DNA replication
PEBIFDJM_00301 3.7e-143 dnaG 3.6.4.12 L DnaB-like helicase C terminal domain
PEBIFDJM_00302 8e-132 dnaG L Toprim-like
PEBIFDJM_00303 2.9e-11 K Cro/C1-type HTH DNA-binding domain
PEBIFDJM_00304 5.7e-08 S Cro/C1-type HTH DNA-binding domain
PEBIFDJM_00305 2.4e-43
PEBIFDJM_00308 1.5e-09
PEBIFDJM_00310 2.8e-42
PEBIFDJM_00311 6.3e-49
PEBIFDJM_00313 7.1e-43
PEBIFDJM_00314 7.3e-207 L 3'-5' exonuclease
PEBIFDJM_00316 1.2e-154
PEBIFDJM_00317 1e-19
PEBIFDJM_00318 6.3e-30 ruvC 3.1.22.4 L Crossover junction endodeoxyribonuclease RuvC
PEBIFDJM_00322 1e-36 nrdI 1.17.4.1 F Belongs to the NrdI family
PEBIFDJM_00323 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PEBIFDJM_00325 2.7e-153 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PEBIFDJM_00326 8.5e-56 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F deoxyuridine 5'-triphosphate nucleotidohydrolase
PEBIFDJM_00327 1.5e-27 S AP2 domain
PEBIFDJM_00328 8e-99 thyX 2.1.1.148 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant
PEBIFDJM_00329 1.6e-34 S protein conserved in bacteria
PEBIFDJM_00330 9.3e-70 S SprT-like family
PEBIFDJM_00331 7.3e-32
PEBIFDJM_00333 6.5e-70 2.7.1.24 H dephospho-CoA kinase activity
PEBIFDJM_00335 8.1e-42 K Sigma-70, region 4
PEBIFDJM_00336 1.7e-55
PEBIFDJM_00337 5.6e-12
PEBIFDJM_00338 6.2e-25 S Helix-turn-helix domain
PEBIFDJM_00340 7.1e-123 ligB 6.5.1.1, 6.5.1.6, 6.5.1.7 L ATP-dependent DNA ligase
PEBIFDJM_00342 1.8e-21
PEBIFDJM_00343 8.2e-49
PEBIFDJM_00346 1.2e-119 3.2.1.15 M Right handed beta helix region
PEBIFDJM_00347 5.1e-57 S Pfam:DUF867
PEBIFDJM_00348 7.1e-33 K Cro/C1-type HTH DNA-binding domain
PEBIFDJM_00349 7e-43 M Glycosyltransferase like family 2
PEBIFDJM_00353 1.5e-15 S Phage Terminase
PEBIFDJM_00356 2.2e-79
PEBIFDJM_00358 2.6e-44 L Phage terminase, small subunit
PEBIFDJM_00359 0.0 S Terminase
PEBIFDJM_00360 3.9e-224 S Phage portal protein
PEBIFDJM_00361 1.6e-121 clpP 3.4.21.92 OU Belongs to the peptidase S14 family
PEBIFDJM_00362 2.2e-165 S Phage capsid family
PEBIFDJM_00363 1.4e-28 N domain, Protein
PEBIFDJM_00364 5.9e-25 S Phage gp6-like head-tail connector protein
PEBIFDJM_00365 6.4e-33 S Phage head-tail joining protein
PEBIFDJM_00366 5.8e-07 S Bacteriophage HK97-gp10, putative tail-component
PEBIFDJM_00367 2.2e-25
PEBIFDJM_00368 2.3e-70 N phage major tail protein, phi13 family
PEBIFDJM_00369 1.4e-16
PEBIFDJM_00370 2.2e-111 D Phage tail tape measure protein
PEBIFDJM_00371 1.5e-104 S Phage tail protein
PEBIFDJM_00372 5.7e-182 L Prophage endopeptidase tail
PEBIFDJM_00373 1.3e-43
PEBIFDJM_00374 6.7e-157 S Domain of unknown function (DUF2479)
PEBIFDJM_00375 2e-19
PEBIFDJM_00377 8.8e-30 S Haemolysin XhlA
PEBIFDJM_00378 3.8e-152 xlyB 3.5.1.28 CBM50 MT N-acetylmuramoyl-L-alanine amidase
PEBIFDJM_00379 6.3e-33 S Bacteriophage A118-like holin, Hol118
PEBIFDJM_00380 8.7e-08
PEBIFDJM_00381 1.3e-17 S YolD-like protein
PEBIFDJM_00382 1.1e-20 S protein disulfide oxidoreductase activity
PEBIFDJM_00384 6.1e-128 ftsK D FtsK/SpoIIIE family
PEBIFDJM_00385 3.4e-64
PEBIFDJM_00386 1.3e-15 K Transcriptional regulator
PEBIFDJM_00387 3.7e-98 K Helix-turn-helix domain
PEBIFDJM_00388 2e-133 ysnF S protein conserved in bacteria
PEBIFDJM_00389 1.6e-79 ysnE K acetyltransferase
PEBIFDJM_00391 0.0 ilvB 2.2.1.6 E Acetolactate synthase
PEBIFDJM_00392 3.2e-84 ilvN 2.2.1.6 E Acetolactate synthase
PEBIFDJM_00393 3.1e-192 ilvC 1.1.1.86 EH Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
PEBIFDJM_00394 3.8e-290 leuA 2.3.3.13 E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
PEBIFDJM_00395 5.7e-200 leuB 1.1.1.85 CE Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate
PEBIFDJM_00396 1.7e-276 leuC 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PEBIFDJM_00397 9e-115 leuD 4.2.1.33, 4.2.1.35 E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
PEBIFDJM_00398 2.5e-186 ysoA H Tetratricopeptide repeat
PEBIFDJM_00399 1.8e-226 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
PEBIFDJM_00400 3.4e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
PEBIFDJM_00401 9.2e-311 lonB 2.7.7.7, 3.4.21.53 LO Belongs to the peptidase S16 family
PEBIFDJM_00402 0.0 lon 3.4.21.53 O ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
PEBIFDJM_00403 1.2e-106 engB D Necessary for normal cell division and for the maintenance of normal septation
PEBIFDJM_00404 1.4e-89 ysxD
PEBIFDJM_00405 3.5e-247 hemA 1.2.1.70 H Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
PEBIFDJM_00406 3.6e-146 hemX O cytochrome C
PEBIFDJM_00407 8.7e-173 hemC 2.1.1.107, 2.5.1.61, 4.2.1.75 H Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps
PEBIFDJM_00408 1.7e-142 hemD 2.1.1.107, 4.2.1.75 H Uroporphyrinogen-III synthase
PEBIFDJM_00409 2.8e-182 hemB 4.2.1.24 H Belongs to the ALAD family
PEBIFDJM_00410 1.5e-247 hemL 5.4.3.8 H Glutamate-1-semialdehyde aminotransferase
PEBIFDJM_00411 5.6e-218 spoVID M stage VI sporulation protein D
PEBIFDJM_00412 2.3e-198 ysxE S A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
PEBIFDJM_00413 1.6e-25
PEBIFDJM_00414 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
PEBIFDJM_00415 7.3e-247 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
PEBIFDJM_00416 1.5e-84 comC 3.4.23.43 NOU COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases
PEBIFDJM_00417 7.6e-167 spoIIB S Sporulation related domain
PEBIFDJM_00418 8.3e-102 maf D septum formation protein Maf
PEBIFDJM_00419 1.3e-125 radC E Belongs to the UPF0758 family
PEBIFDJM_00420 1.8e-184 mreB D Rod shape-determining protein MreB
PEBIFDJM_00421 2.8e-157 mreC M Involved in formation and maintenance of cell shape
PEBIFDJM_00422 1.4e-84 mreD M shape-determining protein
PEBIFDJM_00423 1.4e-108 minC D Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization
PEBIFDJM_00424 4.7e-143 minD D Belongs to the ParA family
PEBIFDJM_00425 4.2e-144 spoIVFA M COG0739 Membrane proteins related to metalloendopeptidases
PEBIFDJM_00426 9.2e-161 spoIVFB S Stage IV sporulation protein
PEBIFDJM_00427 5.8e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
PEBIFDJM_00428 1e-54 ysxB J ribosomal protein
PEBIFDJM_00429 2.5e-46 rpmA J Belongs to the bacterial ribosomal protein bL27 family
PEBIFDJM_00430 1.5e-106 spo0B T Sporulation initiation phospho-transferase B, C-terminal
PEBIFDJM_00431 5.6e-231 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
PEBIFDJM_00432 2.2e-73 pheB 5.4.99.5 S Belongs to the UPF0735 family
PEBIFDJM_00433 7.6e-163 pheA 4.2.1.51 E Prephenate dehydratase
PEBIFDJM_00434 3.6e-94 niaR S small molecule binding protein (contains 3H domain)
PEBIFDJM_00435 1.6e-227 nifS 2.8.1.7 E Cysteine desulfurase
PEBIFDJM_00436 2.2e-301 nadB 1.3.5.4, 1.4.3.16 H Catalyzes the oxidation of L-aspartate to iminoaspartate
PEBIFDJM_00437 1.1e-156 nadC 1.4.3.16, 2.4.2.19 H Belongs to the NadC ModD family
PEBIFDJM_00438 1.1e-214 nadA 2.5.1.72 H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
PEBIFDJM_00439 1.8e-156 safA M spore coat assembly protein SafA
PEBIFDJM_00440 3.8e-49 S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PEBIFDJM_00441 1.6e-126 yebC K transcriptional regulatory protein
PEBIFDJM_00442 1.5e-261 alsT E Sodium alanine symporter
PEBIFDJM_00444 1.5e-50 S Family of unknown function (DUF5412)
PEBIFDJM_00446 6.5e-119 yrzF T serine threonine protein kinase
PEBIFDJM_00447 1.7e-193 iolG 1.1.1.18, 1.1.1.369 S Oxidoreductase family, NAD-binding Rossmann fold
PEBIFDJM_00448 5.3e-253 csbX EGP Major facilitator Superfamily
PEBIFDJM_00449 4.8e-93 bofC S BofC C-terminal domain
PEBIFDJM_00450 1.6e-106 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
PEBIFDJM_00451 6.6e-187 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
PEBIFDJM_00452 2.6e-18 yrzS S Protein of unknown function (DUF2905)
PEBIFDJM_00453 2e-194 queA 2.4.99.17 J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
PEBIFDJM_00454 5.2e-228 tgt 2.4.2.29 F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine)
PEBIFDJM_00455 1.1e-38 yajC U Preprotein translocase subunit YajC
PEBIFDJM_00456 1.5e-74 yrzE S Protein of unknown function (DUF3792)
PEBIFDJM_00457 1.6e-112 yrbG S membrane
PEBIFDJM_00458 2.4e-268 spoVB S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PEBIFDJM_00459 9.4e-49 yrzD S Post-transcriptional regulator
PEBIFDJM_00460 0.0 secF U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
PEBIFDJM_00461 1.5e-86 yrvC P regulatory, ligand-binding protein related to C-terminal domains of K channels
PEBIFDJM_00462 1.3e-48 yrvD S Lipopolysaccharide assembly protein A domain
PEBIFDJM_00463 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PEBIFDJM_00464 5.9e-91 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
PEBIFDJM_00465 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
PEBIFDJM_00466 2.9e-70 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
PEBIFDJM_00467 2.4e-260 lytH 3.5.1.28 M COG3103 SH3 domain protein
PEBIFDJM_00469 9.8e-244 hisS 6.1.1.21 J histidyl-tRNA synthetase
PEBIFDJM_00470 0.0 aspS 6.1.1.12 J Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
PEBIFDJM_00471 4e-136 yrvM H COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
PEBIFDJM_00472 4.4e-236 rarA L COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase
PEBIFDJM_00473 1.2e-70 cymR K Transcriptional regulator
PEBIFDJM_00474 9.7e-211 iscS 2.8.1.7 E Cysteine desulfurase
PEBIFDJM_00475 6.6e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
PEBIFDJM_00476 1.4e-15 S COG0457 FOG TPR repeat
PEBIFDJM_00477 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
PEBIFDJM_00478 3.9e-81 yrrD S protein conserved in bacteria
PEBIFDJM_00479 9.8e-31 yrzR
PEBIFDJM_00480 8e-08 S Protein of unknown function (DUF3918)
PEBIFDJM_00481 7.6e-107 glnP P ABC transporter
PEBIFDJM_00482 1.8e-108 gluC P ABC transporter
PEBIFDJM_00483 1.6e-143 glnH ET Belongs to the bacterial solute-binding protein 3 family
PEBIFDJM_00484 1.1e-130 glnQ 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
PEBIFDJM_00485 1.3e-169 yrrI S AI-2E family transporter
PEBIFDJM_00486 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
PEBIFDJM_00487 1.7e-41 yrzL S Belongs to the UPF0297 family
PEBIFDJM_00488 2.1e-70 yqgF L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
PEBIFDJM_00489 1.2e-45 yrzB S Belongs to the UPF0473 family
PEBIFDJM_00490 1.6e-183 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
PEBIFDJM_00491 2.3e-119 yrrM 2.1.1.104 S O-methyltransferase
PEBIFDJM_00492 2.9e-173 yegQ O Peptidase U32
PEBIFDJM_00493 1.4e-245 yegQ O COG0826 Collagenase and related proteases
PEBIFDJM_00494 4.7e-114 udk 2.7.1.48 F Cytidine monophosphokinase
PEBIFDJM_00495 2.4e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
PEBIFDJM_00496 0.0 pbpI 3.4.16.4 M Penicillin-binding Protein
PEBIFDJM_00497 1.6e-62 yrrS S Protein of unknown function (DUF1510)
PEBIFDJM_00498 1e-25 yrzA S Protein of unknown function (DUF2536)
PEBIFDJM_00499 7.6e-120 yrrT 4.4.1.21 Q Could be a S-adenosyl-L-methionine-dependent methyltransferase
PEBIFDJM_00500 4.2e-124 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
PEBIFDJM_00501 1.2e-171 mccA 2.5.1.134, 2.5.1.47 E Cysteine synthase
PEBIFDJM_00502 7.5e-211 mccB 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PEBIFDJM_00503 4.6e-35 yrhC S YrhC-like protein
PEBIFDJM_00504 9.2e-78 yrhD S Protein of unknown function (DUF1641)
PEBIFDJM_00505 0.0 fdhA 1.17.1.10, 1.17.1.9 C formate dehydrogenase (NAD+) activity
PEBIFDJM_00506 2.3e-60 yrhF S Uncharacterized conserved protein (DUF2294)
PEBIFDJM_00508 3e-142 focA P Formate nitrite
PEBIFDJM_00511 4.5e-97 yrhH Q methyltransferase
PEBIFDJM_00512 4.8e-105 Z012_03230 K Tetracycline repressor, C-terminal all-alpha domain
PEBIFDJM_00513 0.0 cypD 1.14.14.1, 1.6.2.4 C Belongs to the cytochrome P450 family
PEBIFDJM_00514 1.5e-46 yrhK S YrhK-like protein
PEBIFDJM_00515 0.0 yrhL I Acyltransferase family
PEBIFDJM_00516 2.5e-150 rsiV S Protein of unknown function (DUF3298)
PEBIFDJM_00517 4.3e-86 sigV K Belongs to the sigma-70 factor family. ECF subfamily
PEBIFDJM_00518 1.1e-150 yrhO K Archaeal transcriptional regulator TrmB
PEBIFDJM_00519 3.6e-106 yrhP E LysE type translocator
PEBIFDJM_00520 1.1e-253 cycA E COG1113 Gamma-aminobutyrate permease and related permeases
PEBIFDJM_00521 0.0 levR K PTS system fructose IIA component
PEBIFDJM_00522 3.9e-75 levD 2.7.1.202 G PTS system fructose IIA component
PEBIFDJM_00523 6.3e-82 levE 2.7.1.202 G PTS system mannose fructose sorbose family
PEBIFDJM_00524 4.9e-116 manY G COG3715 Phosphotransferase system, mannose fructose N-acetylgalactosamine-specific component IIC
PEBIFDJM_00525 1.5e-152 manZ G COG3716 Phosphotransferase system, mannose fructose N-acetylgalactosamine-specific component IID
PEBIFDJM_00526 0.0 sacC 3.2.1.26, 3.2.1.65, 3.2.1.80 GH32 G Belongs to the glycosyl hydrolase 32 family
PEBIFDJM_00527 5e-90 yhbO 1.11.1.6, 3.5.1.124 S protease
PEBIFDJM_00528 3.9e-198 adhA 1.1.1.1 C alcohol dehydrogenase
PEBIFDJM_00529 1.6e-28 yphJ 4.1.1.44 S peroxiredoxin activity
PEBIFDJM_00530 1.3e-46 yraB K helix_turn_helix, mercury resistance
PEBIFDJM_00531 1.1e-49 yraD M Spore coat protein
PEBIFDJM_00532 7.5e-26 yraE
PEBIFDJM_00533 2.9e-223 adhB 1.1.1.1, 1.1.1.14, 1.1.1.284, 1.2.1.46 E COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
PEBIFDJM_00534 6.4e-63 yraF M Spore coat protein
PEBIFDJM_00535 1.5e-36 yraG
PEBIFDJM_00536 9.4e-65 E Glyoxalase-like domain
PEBIFDJM_00537 9.2e-61 T sh3 domain protein
PEBIFDJM_00538 1.7e-60 T sh3 domain protein
PEBIFDJM_00539 1.7e-153 S Alpha beta hydrolase
PEBIFDJM_00540 7.6e-42 yraL S COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PEBIFDJM_00541 2.7e-157 csn 3.2.1.132 M Aids in the defense against invading fungal pathogens by degrading their cell wall chitosan
PEBIFDJM_00542 7.4e-13 yraM S PrpF protein
PEBIFDJM_00543 5.5e-203 yraM S PrpF protein
PEBIFDJM_00544 3.4e-163 yraN K Transcriptional regulator
PEBIFDJM_00545 2.8e-225 yraO C Citrate transporter
PEBIFDJM_00546 4.5e-188 yrpG C Aldo/keto reductase family
PEBIFDJM_00547 2.2e-23 sigZ K Belongs to the sigma-70 factor family. ECF subfamily
PEBIFDJM_00548 3.1e-60 sigZ K Belongs to the sigma-70 factor family. ECF subfamily
PEBIFDJM_00549 1e-115 adcA S ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
PEBIFDJM_00551 4.8e-123 yrpD S Domain of unknown function, YrpD
PEBIFDJM_00552 4.8e-148 murI 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
PEBIFDJM_00553 1.5e-189 yrpB 1.13.12.16 S COG2070 Dioxygenases related to 2-nitropropane dioxygenase
PEBIFDJM_00554 3.2e-166 aadK G Streptomycin adenylyltransferase
PEBIFDJM_00555 4.5e-91 yrdA S DinB family
PEBIFDJM_00556 3.6e-56 S Protein of unknown function (DUF2568)
PEBIFDJM_00557 1.2e-100 yrdC 3.5.1.19 Q Isochorismatase family
PEBIFDJM_00559 9.2e-231 cypA C Cytochrome P450
PEBIFDJM_00560 1.2e-15 yrdF K ribonuclease inhibitor
PEBIFDJM_00561 6.3e-79 bkdR K helix_turn_helix ASNC type
PEBIFDJM_00562 2.8e-137 azlC E AzlC protein
PEBIFDJM_00563 2.5e-50 azlD E Branched-chain amino acid transport protein (AzlD)
PEBIFDJM_00564 2.5e-226 brnQ E Component of the transport system for branched-chain amino acids
PEBIFDJM_00565 7.2e-161 gltR K LysR substrate binding domain
PEBIFDJM_00566 1.3e-66 yodA S tautomerase
PEBIFDJM_00567 1.7e-152 czcD P COG1230 Co Zn Cd efflux system component
PEBIFDJM_00568 2e-199 trkA P Oxidoreductase
PEBIFDJM_00569 1.1e-158 yrdQ K Transcriptional regulator
PEBIFDJM_00570 1.6e-169 yrdR EG EamA-like transporter family
PEBIFDJM_00571 3.9e-16 S YrzO-like protein
PEBIFDJM_00572 4.8e-230 corC1 S COG1253 Hemolysins and related proteins containing CBS domains
PEBIFDJM_00573 6.9e-83 bltD 2.3.1.57 K FR47-like protein
PEBIFDJM_00574 1.1e-209 blt EGP Major facilitator Superfamily
PEBIFDJM_00575 3.1e-150 bltR K helix_turn_helix, mercury resistance
PEBIFDJM_00576 6.4e-107 yrkC G Cupin domain
PEBIFDJM_00577 7.8e-39 yrkD S protein conserved in bacteria
PEBIFDJM_00578 2.8e-82 yrkE O DsrE/DsrF/DrsH-like family
PEBIFDJM_00579 1.8e-96 yrkF OP Belongs to the sulfur carrier protein TusA family
PEBIFDJM_00581 2.7e-205 yrkH P Rhodanese Homology Domain
PEBIFDJM_00582 5.4e-36 yrkI O Belongs to the sulfur carrier protein TusA family
PEBIFDJM_00583 9.3e-112 yrkJ S membrane transporter protein
PEBIFDJM_00584 7e-166 gmuG 3.2.1.78 GH26 G Belongs to the glycosyl hydrolase 26 family
PEBIFDJM_00585 6.3e-217 mepA V Multidrug transporter MatE
PEBIFDJM_00586 3.3e-113 tetR3 K Transcriptional regulator
PEBIFDJM_00587 3.1e-125 sigK K sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PEBIFDJM_00588 2.6e-73 nucB M Deoxyribonuclease NucA/NucB
PEBIFDJM_00589 5.1e-133 yqeB
PEBIFDJM_00590 1.5e-169 gnd 1.1.1.343, 1.1.1.44 G 6-phosphogluconate dehydrogenase
PEBIFDJM_00591 1.8e-105 yqeD S SNARE associated Golgi protein
PEBIFDJM_00592 2e-132 xlyA 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
PEBIFDJM_00593 1.2e-140 yqeF E GDSL-like Lipase/Acylhydrolase
PEBIFDJM_00595 5.3e-95 yqeG S hydrolase of the HAD superfamily
PEBIFDJM_00596 9.1e-214 yqeH S In Bacillus subtilis this enzyme appears to be involved in 30S ribosomal RNA subunit biogenesis
PEBIFDJM_00597 3.9e-156 aroE 1.1.1.25 E Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
PEBIFDJM_00598 2.1e-45 yhbY J RNA-binding protein containing KH domain, possibly ribosomal protein
PEBIFDJM_00599 3.8e-107 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
PEBIFDJM_00600 3.7e-102 nadD 2.7.6.3, 2.7.7.18 H HD superfamily hydrolase involved in NAD metabolism
PEBIFDJM_00601 9.9e-61 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
PEBIFDJM_00602 2.9e-139 yqeM Q Methyltransferase
PEBIFDJM_00603 2.5e-147 comER E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PEBIFDJM_00604 4.3e-104 wza L COG1555 DNA uptake protein and related DNA-binding proteins
PEBIFDJM_00605 2.1e-105 comEB 3.5.4.12 F ComE operon protein 2
PEBIFDJM_00606 0.0 comEC S Competence protein ComEC
PEBIFDJM_00607 4.1e-15 S YqzM-like protein
PEBIFDJM_00608 9.6e-189 holA 2.7.7.7 L DNA polymerase III delta subunit
PEBIFDJM_00609 9.7e-37 rpsT J Binds directly to 16S ribosomal RNA
PEBIFDJM_00610 5e-204 gpr 3.4.24.78 C Initiates the rapid degradation of small, acid-soluble proteins during spore germination
PEBIFDJM_00611 2e-222 spoIIP M stage II sporulation protein P
PEBIFDJM_00612 3.6e-52 yqxA S Protein of unknown function (DUF3679)
PEBIFDJM_00613 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
PEBIFDJM_00614 1.6e-216 hemN H Involved in the biosynthesis of porphyrin-containing compound
PEBIFDJM_00615 4.7e-188 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
PEBIFDJM_00616 3.8e-75 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
PEBIFDJM_00617 0.0 dnaK O Heat shock 70 kDa protein
PEBIFDJM_00618 4.2e-182 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
PEBIFDJM_00619 5.4e-175 prmA J Methylates ribosomal protein L11
PEBIFDJM_00620 1.4e-139 rsmE 2.1.1.193 J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit
PEBIFDJM_00621 2.1e-260 yqeV 2.8.4.5 J ribosomal protein S12 methylthiotransferase
PEBIFDJM_00622 1.4e-157 yqeW P COG1283 Na phosphate symporter
PEBIFDJM_00623 1.2e-19 rpsU J Belongs to the bacterial ribosomal protein bS21 family
PEBIFDJM_00624 2.5e-61 yqeY S Yqey-like protein
PEBIFDJM_00625 1.5e-226 yqeZ O COG1030 Membrane-bound serine protease (ClpP class)
PEBIFDJM_00626 4.3e-122 yqfA S UPF0365 protein
PEBIFDJM_00627 3.7e-22 yqfB
PEBIFDJM_00628 2.7e-45 yqfC S sporulation protein YqfC
PEBIFDJM_00629 1.5e-185 yqfD 3.1.3.102, 3.1.3.104 S Stage IV sporulation
PEBIFDJM_00630 2.5e-175 phoH T Phosphate starvation-inducible protein PhoH
PEBIFDJM_00632 0.0 yqfF S membrane-associated HD superfamily hydrolase
PEBIFDJM_00633 1.1e-80 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
PEBIFDJM_00634 3.5e-61 dgkA 2.7.1.107, 2.7.1.66 M Diacylglycerol kinase
PEBIFDJM_00635 1.3e-69 cdd 2.4.2.2, 3.5.4.5 F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
PEBIFDJM_00636 3.1e-167 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
PEBIFDJM_00637 8.4e-19 S YqzL-like protein
PEBIFDJM_00638 6.3e-145 recO L Involved in DNA repair and RecF pathway recombination
PEBIFDJM_00639 3.3e-174 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
PEBIFDJM_00640 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
PEBIFDJM_00641 4.5e-112 ccpN K CBS domain
PEBIFDJM_00642 5.8e-149 yqfL 2.7.11.33, 2.7.4.28 S Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
PEBIFDJM_00643 4.5e-88 yaiI S Belongs to the UPF0178 family
PEBIFDJM_00644 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
PEBIFDJM_00645 1.2e-200 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
PEBIFDJM_00646 1.6e-61 cccA C COG2010 Cytochrome c, mono- and diheme variants
PEBIFDJM_00647 6.8e-116 trmK 2.1.1.217 S SAM-dependent methyltransferase
PEBIFDJM_00648 2.8e-210 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
PEBIFDJM_00649 4.5e-177 ispH 1.17.7.4, 2.7.4.25 IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
PEBIFDJM_00650 2.9e-14 yqfQ S YqfQ-like protein
PEBIFDJM_00651 2.9e-243 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
PEBIFDJM_00652 8.8e-167 nfo 3.1.21.2 L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
PEBIFDJM_00653 2.1e-36 yqfT S Protein of unknown function (DUF2624)
PEBIFDJM_00654 1.6e-157 yqfU S Uncharacterized protein conserved in bacteria (DUF2179)
PEBIFDJM_00655 4.2e-77 zur P Belongs to the Fur family
PEBIFDJM_00656 1.2e-108 yqfW S Belongs to the 5'(3')-deoxyribonucleotidase family
PEBIFDJM_00657 4.3e-62 yqfX S membrane
PEBIFDJM_00658 2.8e-202 ispG 1.17.7.1, 1.17.7.3 I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
PEBIFDJM_00659 4.4e-46 yqfZ M LysM domain
PEBIFDJM_00660 3.9e-131 yqgB S Protein of unknown function (DUF1189)
PEBIFDJM_00661 4e-73 yqgC S protein conserved in bacteria
PEBIFDJM_00662 6.3e-116 sodA 1.15.1.1 P radicals which are normally produced within the cells and which are toxic to biological systems
PEBIFDJM_00663 1.3e-230 yqgE EGP Major facilitator superfamily
PEBIFDJM_00664 0.0 pbpA 3.4.16.4 M penicillin-binding protein
PEBIFDJM_00665 7e-142 pstS P Phosphate
PEBIFDJM_00666 3.2e-159 pstC P probably responsible for the translocation of the substrate across the membrane
PEBIFDJM_00667 4.4e-158 pstA P Phosphate transport system permease
PEBIFDJM_00668 1.4e-147 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PEBIFDJM_00669 4.9e-145 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
PEBIFDJM_00670 7.3e-72 yqzC S YceG-like family
PEBIFDJM_00671 9.2e-51 yqzD
PEBIFDJM_00673 1.2e-194 yqgM 2.4.1.11, 2.4.1.18 GH57,GT4 M Glycosyl transferases group 1
PEBIFDJM_00674 9.4e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PEBIFDJM_00675 3.9e-104 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
PEBIFDJM_00676 2.5e-09 yqgO
PEBIFDJM_00677 1.4e-268 gluP 3.4.21.105 O membrane protein (homolog of Drosophila rhomboid)
PEBIFDJM_00678 4.3e-33 yqgQ S Protein conserved in bacteria
PEBIFDJM_00679 5.2e-181 glcK 2.7.1.2 G Glucokinase
PEBIFDJM_00680 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
PEBIFDJM_00681 1.4e-222 yqgT 3.4.19.11 E Gamma-D-glutamyl-L-diamino acid endopeptidase
PEBIFDJM_00682 2.7e-199 yqgU
PEBIFDJM_00683 9.1e-50 yqgV S Thiamine-binding protein
PEBIFDJM_00684 8.9e-23 yqgW S Protein of unknown function (DUF2759)
PEBIFDJM_00685 4.7e-122 ycbL 3.1.2.6 S COG0491 Zn-dependent hydrolases, including glyoxylases
PEBIFDJM_00686 1.8e-37 yqgY S Protein of unknown function (DUF2626)
PEBIFDJM_00687 2.7e-64 yqgZ 1.20.4.1 P Belongs to the ArsC family
PEBIFDJM_00689 3.5e-149 yqhA T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PEBIFDJM_00690 1.3e-238 corC1 S COG1253 Hemolysins and related proteins containing CBS domains
PEBIFDJM_00691 7.2e-175 corA P Mg2 transporter protein
PEBIFDJM_00694 3.9e-201 comGA NU COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
PEBIFDJM_00695 1.7e-174 comGB NU COG1459 Type II secretory pathway, component PulF
PEBIFDJM_00696 6.8e-47 comGC U Required for transformation and DNA binding
PEBIFDJM_00697 1.2e-68 gspH NU protein transport across the cell outer membrane
PEBIFDJM_00698 1.3e-57 comGE
PEBIFDJM_00699 2.7e-45 comGF U Putative Competence protein ComGF
PEBIFDJM_00700 1.2e-43 S ComG operon protein 7
PEBIFDJM_00701 5.2e-26 yqzE S YqzE-like protein
PEBIFDJM_00702 7.3e-54 yqzG S Protein of unknown function (DUF3889)
PEBIFDJM_00703 4.3e-114 yqxM
PEBIFDJM_00704 2.5e-58 sipW 3.4.21.89 U Signal peptidase
PEBIFDJM_00705 2.5e-141 tasA S Cell division protein FtsN
PEBIFDJM_00706 1e-54 sinR K transcriptional
PEBIFDJM_00707 1.2e-24 sinI S Anti-repressor SinI
PEBIFDJM_00708 2.5e-152 yqhG S Bacterial protein YqhG of unknown function
PEBIFDJM_00709 0.0 yqhH L COG0553 Superfamily II DNA RNA helicases, SNF2 family
PEBIFDJM_00710 6.9e-206 gcvT 1.4.4.2, 2.1.2.10 E The glycine cleavage system catalyzes the degradation of glycine
PEBIFDJM_00711 2.2e-254 gcvPA 1.4.4.2 E The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PEBIFDJM_00712 5.3e-286 gcvPB 1.4.4.2 E The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
PEBIFDJM_00713 2.3e-63 yqhL P COG0607 Rhodanese-related sulfurtransferase
PEBIFDJM_00714 2.6e-160 lipM 6.3.1.20 H Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domain of GcvH, an intermediate carrier during protein lipoylation
PEBIFDJM_00715 9.4e-74 mntR K Involved in manganese homeostasis. Might activate the transcription of the mntABCD operon
PEBIFDJM_00716 8.1e-165 yqhO S esterase of the alpha-beta hydrolase superfamily
PEBIFDJM_00717 2.2e-61 yqhP
PEBIFDJM_00718 8e-174 yqhQ S Protein of unknown function (DUF1385)
PEBIFDJM_00719 2.3e-93 yqhR S Conserved membrane protein YqhR
PEBIFDJM_00720 1.5e-77 aroQ 4.2.1.10 E Catalyzes a trans-dehydration via an enolate intermediate
PEBIFDJM_00721 3.4e-173 yqhT 3.4.11.9, 3.4.13.9 E COG0006 Xaa-Pro aminopeptidase
PEBIFDJM_00722 5.4e-98 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
PEBIFDJM_00723 7.9e-37 yqhV S Protein of unknown function (DUF2619)
PEBIFDJM_00724 8.8e-170 spoIIIAA S stage III sporulation protein AA
PEBIFDJM_00725 1.1e-84 spoIIIAB S Stage III sporulation protein
PEBIFDJM_00726 7.6e-29 spoIIIAC S stage III sporulation protein AC
PEBIFDJM_00727 2.3e-58 spoIIIAD S Stage III sporulation protein AD
PEBIFDJM_00728 1.3e-197 spoIIIAE S stage III sporulation protein AE
PEBIFDJM_00729 9e-102 spoIIIAF S Stage III sporulation protein AF (Spore_III_AF)
PEBIFDJM_00730 1.9e-108 spoIIIAG S stage III sporulation protein AG
PEBIFDJM_00731 9.9e-91 spoIIIAH S SpoIIIAH-like protein
PEBIFDJM_00732 2.6e-64 accB 2.3.1.12, 4.1.1.3 I first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
PEBIFDJM_00733 1.5e-255 accC 6.3.4.14, 6.4.1.2 I An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
PEBIFDJM_00734 8.9e-66 yqhY S protein conserved in bacteria
PEBIFDJM_00735 7.4e-65 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
PEBIFDJM_00736 1e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
PEBIFDJM_00737 3.1e-246 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PEBIFDJM_00738 5.8e-39 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
PEBIFDJM_00739 7.7e-163 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PEBIFDJM_00740 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
PEBIFDJM_00741 6.6e-156 rrmJ 2.1.1.226, 2.1.1.227 J rRNA methylase
PEBIFDJM_00742 1.7e-78 argR K Regulates arginine biosynthesis genes
PEBIFDJM_00743 2.2e-310 recN L May be involved in recombinational repair of damaged DNA
PEBIFDJM_00744 1.2e-238 rseP 3.4.21.116 M Stage IV sporulation protein B
PEBIFDJM_00745 3.2e-144 KT May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process
PEBIFDJM_00747 4e-212 yqiG C COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family
PEBIFDJM_00748 6e-27
PEBIFDJM_00749 5.4e-107 amiC 3.5.1.28 M Cell wall hydrolase autolysin
PEBIFDJM_00750 8.9e-133 yqiK 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PEBIFDJM_00751 1.2e-219 mmgA 2.3.1.9 I Belongs to the thiolase family
PEBIFDJM_00752 6.8e-156 hbdA 1.1.1.157 I Dehydrogenase
PEBIFDJM_00753 1.8e-212 mmgC I acyl-CoA dehydrogenase
PEBIFDJM_00754 8.1e-210 prpC 2.3.3.1, 2.3.3.5 C Belongs to the citrate synthase family
PEBIFDJM_00755 2.2e-276 prpD 4.2.1.79 S 2-methylcitrate dehydratase
PEBIFDJM_00756 3e-162 prpB 4.1.3.30 G Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
PEBIFDJM_00757 2.6e-33 yqzF S Protein of unknown function (DUF2627)
PEBIFDJM_00758 0.0 bkdR 2.7.13.3 KT Transcriptional regulator
PEBIFDJM_00759 5.1e-154 pta 2.3.1.19, 2.3.1.8 C phosphate butyryltransferase
PEBIFDJM_00760 2.2e-207 ldh 1.4.1.9 E Belongs to the Glu Leu Phe Val dehydrogenases family
PEBIFDJM_00761 5.1e-201 buk 2.7.2.7 C Belongs to the acetokinase family
PEBIFDJM_00762 3.7e-268 lpdA 1.8.1.4 C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PEBIFDJM_00763 1.9e-186 bfmBAA 1.2.4.4 C COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PEBIFDJM_00764 1.8e-184 bfmBAB 1.2.4.1, 1.2.4.4 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PEBIFDJM_00765 1.1e-226 bfmBB 2.3.1.168, 2.3.1.61 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PEBIFDJM_00766 3.7e-151 bmrR K helix_turn_helix, mercury resistance
PEBIFDJM_00767 7.9e-208 norA EGP Major facilitator Superfamily
PEBIFDJM_00768 3.4e-166 yegS 2.7.1.107 I COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
PEBIFDJM_00769 9.3e-77 yqiW S Belongs to the UPF0403 family
PEBIFDJM_00770 6.3e-137 artP ET Belongs to the bacterial solute-binding protein 3 family
PEBIFDJM_00771 6.2e-109 artQ E COG0765 ABC-type amino acid transport system, permease component
PEBIFDJM_00772 2e-129 artM 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
PEBIFDJM_00773 7.3e-175 yqjA S Putative aromatic acid exporter C-terminal domain
PEBIFDJM_00774 1.4e-98 yqjB S protein conserved in bacteria
PEBIFDJM_00776 3.3e-71 mce 4.4.1.5, 5.1.99.1, 5.4.99.2 E COG0346 Lactoylglutathione lyase and related lyases
PEBIFDJM_00777 2.3e-287 mmdA 2.1.3.15, 6.4.1.3 I COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PEBIFDJM_00778 4.7e-202 yqjE 3.4.11.4 E COG2195 Di- and tripeptidases
PEBIFDJM_00779 7.5e-140 yqjF S Uncharacterized conserved protein (COG2071)
PEBIFDJM_00780 5.7e-144 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PEBIFDJM_00781 4.5e-24 yqzJ
PEBIFDJM_00782 1.6e-235 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PEBIFDJM_00783 6.9e-267 gnd 1.1.1.343, 1.1.1.44 G Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PEBIFDJM_00784 2.6e-288 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
PEBIFDJM_00785 3.8e-173 rnz 3.1.26.11 S Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
PEBIFDJM_00786 3e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
PEBIFDJM_00787 2.1e-145 yqjL S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
PEBIFDJM_00788 1.4e-192 namA 1.6.99.1 C Catalyzes the reduction of the double bond of an array of alpha,beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes
PEBIFDJM_00789 0.0 rocB E arginine degradation protein
PEBIFDJM_00790 6.2e-146 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PEBIFDJM_00791 3.1e-178 yqjP S COG0491 Zn-dependent hydrolases, including glyoxylases
PEBIFDJM_00792 8.6e-142 yqjQ S Belongs to the short-chain dehydrogenases reductases (SDR) family
PEBIFDJM_00793 1.9e-261 dsdA 4.3.1.18 E Belongs to the serine threonine dehydratase family. DsdA subfamily
PEBIFDJM_00794 2.4e-178 coaA 2.7.1.33 F Pantothenic acid kinase
PEBIFDJM_00795 4.6e-72 yqjT 3.1.26.4 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PEBIFDJM_00797 3.4e-225 yqjV G Major Facilitator Superfamily
PEBIFDJM_00799 4.1e-239 polYB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PEBIFDJM_00800 5.7e-50 S YolD-like protein
PEBIFDJM_00801 4e-86 yqjY K acetyltransferase
PEBIFDJM_00802 6.8e-59 yqjZ 2.3.1.128, 2.5.1.18 S enzyme involved in biosynthesis of extracellular polysaccharides
PEBIFDJM_00803 1.7e-193 yqkA K GrpB protein
PEBIFDJM_00804 2.8e-54 yqkB S Belongs to the HesB IscA family
PEBIFDJM_00805 4.6e-38 yqkC S Protein of unknown function (DUF2552)
PEBIFDJM_00806 2.7e-171 yqkD S COG1073 Hydrolases of the alpha beta superfamily
PEBIFDJM_00807 3.1e-12 yqkE S Protein of unknown function (DUF3886)
PEBIFDJM_00808 7.4e-169 yqkF C oxidoreductases (related to aryl-alcohol dehydrogenases)
PEBIFDJM_00810 1.2e-92 nudF 3.6.1.13 L Belongs to the Nudix hydrolase family
PEBIFDJM_00811 5.3e-220 yqxK 3.6.4.12 L DNA helicase
PEBIFDJM_00812 4.5e-58 ansR K Transcriptional regulator
PEBIFDJM_00813 3.6e-185 ansA 3.5.1.1 EJ L-asparaginase
PEBIFDJM_00814 2.9e-268 aspA 4.2.1.2, 4.3.1.1 E Aspartate ammonia-lyase
PEBIFDJM_00815 3.1e-235 mleN C Na H antiporter
PEBIFDJM_00816 5.5e-242 mleA 1.1.1.38 C malic enzyme
PEBIFDJM_00817 2.2e-31 yqkK
PEBIFDJM_00818 2.3e-108 spoIIM S Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane
PEBIFDJM_00819 2.4e-80 fur P Belongs to the Fur family
PEBIFDJM_00820 3.7e-37 S Protein of unknown function (DUF4227)
PEBIFDJM_00821 2.6e-166 xerD L recombinase XerD
PEBIFDJM_00822 3e-231 deoB 5.4.2.7 G Phosphotransfer between the C1 and C5 carbon atoms of pentose
PEBIFDJM_00823 1.7e-148 punA 2.4.2.1 F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
PEBIFDJM_00824 6.3e-213 dacF 3.4.16.4 M Belongs to the peptidase S11 family
PEBIFDJM_00825 3.9e-57 spoIIAA T Belongs to the anti-sigma-factor antagonist family
PEBIFDJM_00826 1.8e-75 spoIIAB 2.7.11.1 F Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti-anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition
PEBIFDJM_00827 2.4e-136 sigF K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PEBIFDJM_00828 9.6e-112 spoVAA S Stage V sporulation protein AA
PEBIFDJM_00829 1e-67 spoVAB S Stage V sporulation protein AB
PEBIFDJM_00830 2.3e-78 spoVAC S stage V sporulation protein AC
PEBIFDJM_00831 9e-192 spoVAD I Stage V sporulation protein AD
PEBIFDJM_00832 2.2e-57 spoVAEB S stage V sporulation protein
PEBIFDJM_00833 1.4e-110 spoVAEA S stage V sporulation protein
PEBIFDJM_00834 1.4e-273 spoVAF EG Stage V sporulation protein AF
PEBIFDJM_00835 5.7e-255 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
PEBIFDJM_00836 8.1e-149 ypuA S Secreted protein
PEBIFDJM_00837 8e-81 ppiB 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PEBIFDJM_00842 1.9e-25 ppiB 5.2.1.8 O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
PEBIFDJM_00845 7e-16 S SNARE associated Golgi protein
PEBIFDJM_00846 6.6e-33 yhcC S nucleic-acid-binding protein containing a Zn-ribbon domain
PEBIFDJM_00847 7.8e-97 sipT 3.4.21.89 U Belongs to the peptidase S26 family
PEBIFDJM_00848 1.7e-54 ypuD
PEBIFDJM_00849 7.9e-202 ribD 1.1.1.193, 3.5.4.26 H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
PEBIFDJM_00850 3.3e-115 ribE 2.5.1.9 H Riboflavin synthase
PEBIFDJM_00851 1.9e-228 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
PEBIFDJM_00852 3.9e-81 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
PEBIFDJM_00853 4.5e-64 ribT K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PEBIFDJM_00854 1.6e-91 ypuF S Domain of unknown function (DUF309)
PEBIFDJM_00855 2.4e-128 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
PEBIFDJM_00856 2.1e-103 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
PEBIFDJM_00857 4e-98 ypuI S Protein of unknown function (DUF3907)
PEBIFDJM_00858 1.8e-212 dacB 3.4.16.4 M Belongs to the peptidase S11 family
PEBIFDJM_00859 3.5e-103 spmA S Spore maturation protein
PEBIFDJM_00860 1.9e-87 spmB S Spore maturation protein
PEBIFDJM_00861 6.9e-133 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
PEBIFDJM_00862 1.3e-99 resA CO Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c
PEBIFDJM_00863 0.0 ccs1 O COG1333 ResB protein required for cytochrome c biosynthesis
PEBIFDJM_00864 8.8e-215 ccsA O 'COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component'
PEBIFDJM_00865 2.3e-133 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PEBIFDJM_00866 0.0 resE 2.7.13.3 T Histidine kinase
PEBIFDJM_00867 2.6e-103 sigX K Belongs to the sigma-70 factor family. ECF subfamily
PEBIFDJM_00868 2.3e-188 rsiX
PEBIFDJM_00869 2.9e-134 aroD 1.1.1.25, 4.2.1.10 E Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate
PEBIFDJM_00870 1.5e-294 serA 1.1.1.399, 1.1.1.95 E Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PEBIFDJM_00872 5.8e-87 fmnP U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
PEBIFDJM_00873 4.7e-41 fer C Ferredoxin
PEBIFDJM_00874 1.9e-200 ypbB 5.1.3.1 S protein conserved in bacteria
PEBIFDJM_00875 9.2e-286 recQ 3.6.4.12 L DNA helicase
PEBIFDJM_00876 2.4e-99 ypbD S metal-dependent membrane protease
PEBIFDJM_00877 5.8e-63 ypbE M Lysin motif
PEBIFDJM_00878 2.8e-81 ypbF S Protein of unknown function (DUF2663)
PEBIFDJM_00879 1.8e-147 ypbG S Calcineurin-like phosphoesterase superfamily domain
PEBIFDJM_00880 2.4e-104 mecB NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
PEBIFDJM_00881 2.6e-244 gudB 1.4.1.2, 1.4.1.3 E Belongs to the Glu Leu Phe Val dehydrogenases family
PEBIFDJM_00882 3.9e-176 ypdA 1.18.1.2, 1.19.1.1, 1.8.1.9 O COG0492 Thioredoxin reductase
PEBIFDJM_00883 2.3e-119 prsW S Involved in the degradation of specific anti-sigma factors
PEBIFDJM_00884 7.5e-153 sleB 3.5.1.28 M Spore cortex-lytic enzyme
PEBIFDJM_00885 2.1e-252 hemX 2.1.1.107, 4.2.1.75 H sporulation protein
PEBIFDJM_00886 1.1e-110 ypfA M Flagellar protein YcgR
PEBIFDJM_00887 1.8e-23 S Family of unknown function (DUF5359)
PEBIFDJM_00888 1.6e-112 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
PEBIFDJM_00889 1.6e-205 rpsA 1.17.7.4 J Ribosomal protein S1
PEBIFDJM_00890 2.5e-184 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
PEBIFDJM_00891 1.4e-07 S YpzI-like protein
PEBIFDJM_00892 3.9e-102 yphA
PEBIFDJM_00893 2.5e-161 seaA S YIEGIA protein
PEBIFDJM_00894 1.6e-28 ypzH
PEBIFDJM_00895 3.9e-248 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
PEBIFDJM_00896 5.1e-190 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
PEBIFDJM_00897 1.6e-18 yphE S Protein of unknown function (DUF2768)
PEBIFDJM_00898 5.4e-138 yphF
PEBIFDJM_00899 3.7e-279 spoIVA S ATPase. Has a role at an early stage in the morphogenesis of the spore coat
PEBIFDJM_00900 4.7e-42 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PEBIFDJM_00901 7.1e-101 folE 3.5.4.16 H GTP cyclohydrolase
PEBIFDJM_00902 2.3e-34 mtrB K Required for transcription attenuation control in the Trp operon. This trans-acting factor seems to recognize a 10 bases nucleotide sequence in the Trp leader transcript causing transcription termination. Binds the leader RNA only in presence of L-tryptophan
PEBIFDJM_00903 2.8e-137 hepS 2.5.1.30 H Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1
PEBIFDJM_00904 8.6e-133 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
PEBIFDJM_00905 4.5e-194 hepT 2.5.1.30, 2.5.1.83, 2.5.1.90 H Belongs to the FPP GGPP synthase family
PEBIFDJM_00906 9.1e-80 ndk 2.7.4.6 F Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate
PEBIFDJM_00907 2.9e-142 cheR 2.1.1.80 NT COG1352 Methylase of chemotaxis methyl-accepting proteins
PEBIFDJM_00908 5.5e-217 aroC 4.2.3.5 E Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
PEBIFDJM_00909 5.8e-205 aroB 2.7.1.71, 4.2.3.4 E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
PEBIFDJM_00910 1e-63 aroH 2.7.4.25, 5.4.99.5 E Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis
PEBIFDJM_00911 4e-292 trpE 4.1.3.27 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PEBIFDJM_00912 1.2e-180 trpD 2.4.2.18, 4.1.3.27 E Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
PEBIFDJM_00913 1.4e-112 trpC 4.1.1.48, 5.3.1.24 E Belongs to the TrpC family
PEBIFDJM_00914 1.2e-117 trpF 4.1.1.48, 4.2.1.160, 4.2.1.20, 5.3.1.24 E Belongs to the TrpF family
PEBIFDJM_00915 5.2e-231 trpB 4.2.1.20, 5.3.1.24 E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine
PEBIFDJM_00916 5.5e-144 trpA 4.2.1.20 E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate
PEBIFDJM_00917 2.9e-204 hisC 2.6.1.9 E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
PEBIFDJM_00918 1.2e-208 tyrA 1.3.1.12, 1.3.1.43 E prephenate dehydrogenase
PEBIFDJM_00919 3.4e-236 aroA 1.3.1.12, 1.3.1.43, 2.5.1.19 E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate
PEBIFDJM_00920 4.1e-234 S COG0457 FOG TPR repeat
PEBIFDJM_00921 1.1e-98 ypiB S Belongs to the UPF0302 family
PEBIFDJM_00922 1.2e-76 ypiF S Protein of unknown function (DUF2487)
PEBIFDJM_00923 9.3e-97 qcrA C Menaquinol-cytochrome c reductase
PEBIFDJM_00924 5.2e-127 petB C COG1290 Cytochrome b subunit of the bc complex
PEBIFDJM_00925 1.5e-146 qcrC C Menaquinol-cytochrome c reductase cytochrome b c subunit
PEBIFDJM_00926 9.9e-98 ypjA S membrane
PEBIFDJM_00927 6.1e-143 ypjB S sporulation protein
PEBIFDJM_00928 2.4e-156 ypjC S Uncharacterized protein conserved in bacteria (DUF2179)
PEBIFDJM_00929 6.9e-56 ypjD 2.5.1.19 S Nucleotide pyrophosphohydrolase
PEBIFDJM_00930 9.1e-147 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
PEBIFDJM_00931 7.2e-71 mgsA 2.7.1.24, 4.2.3.3 G methylglyoxal synthase
PEBIFDJM_00932 2.4e-127 bshB1 S proteins, LmbE homologs
PEBIFDJM_00933 6.9e-209 bshA GT4 M N-acetyl-alpha-D-glucosaminyl L-malate synthase
PEBIFDJM_00934 7e-220 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
PEBIFDJM_00935 2.5e-183 birA 6.3.4.15 K Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor
PEBIFDJM_00936 1.4e-150 panB 2.1.2.11 H Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate
PEBIFDJM_00937 4.7e-157 panC 2.7.4.25, 6.3.2.1 H Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
PEBIFDJM_00938 3.5e-64 panD 4.1.1.11 H Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
PEBIFDJM_00939 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
PEBIFDJM_00940 6.7e-23 ypmA S Protein of unknown function (DUF4264)
PEBIFDJM_00941 2.2e-79 ypmB S protein conserved in bacteria
PEBIFDJM_00942 4.4e-222 aspB 2.6.1.1, 2.6.1.14 E Aminotransferase
PEBIFDJM_00943 5.8e-252 asnS 6.1.1.22 J asparaginyl-tRNA
PEBIFDJM_00944 5.7e-129 dnaD L DNA replication protein DnaD
PEBIFDJM_00945 2.2e-122 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
PEBIFDJM_00946 1.8e-92 ypoC
PEBIFDJM_00947 0.0 ponA 2.4.1.129, 2.7.7.7, 3.4.16.4 GT51 M penicillin-binding protein
PEBIFDJM_00948 1.2e-114 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PEBIFDJM_00949 3.7e-187 yppC S Protein of unknown function (DUF2515)
PEBIFDJM_00952 5.7e-11 yppE S Bacterial domain of unknown function (DUF1798)
PEBIFDJM_00954 5.1e-47 yppG S YppG-like protein
PEBIFDJM_00955 7.3e-71 hspX O Belongs to the small heat shock protein (HSP20) family
PEBIFDJM_00956 1e-79 ypqE 2.7.1.199 G COG2190 Phosphotransferase system IIA components
PEBIFDJM_00957 0.0 yprA L COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster
PEBIFDJM_00958 5.1e-237 yprB L RNase_H superfamily
PEBIFDJM_00959 8.2e-91 ypsA S Belongs to the UPF0398 family
PEBIFDJM_00960 2.8e-45 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
PEBIFDJM_00961 3.5e-224 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
PEBIFDJM_00963 0.0 ypvA 3.6.4.12 KL COG1199 Rad3-related DNA helicases
PEBIFDJM_00964 2.3e-131 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PEBIFDJM_00965 4.1e-158 kduI 5.3.1.17 G Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
PEBIFDJM_00966 4.1e-184 ptxS K transcriptional
PEBIFDJM_00967 8.4e-187 kdgK 2.7.1.45 G COG0524 Sugar kinases, ribokinase family
PEBIFDJM_00968 8.6e-102 eda 2.7.1.45, 4.1.2.14, 4.1.3.42 G 2-dehydro-3-deoxy-phosphogluconate aldolase
PEBIFDJM_00969 1.9e-170 kdgT P The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system
PEBIFDJM_00970 2.3e-292 ypwA 3.4.17.19 E Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
PEBIFDJM_00971 1.1e-98 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
PEBIFDJM_00972 1.5e-226 pbuX F xanthine
PEBIFDJM_00973 2.4e-206 bcsA Q Naringenin-chalcone synthase
PEBIFDJM_00974 1.5e-86 ypbQ S protein conserved in bacteria
PEBIFDJM_00976 0.0 ypbR S Dynamin family
PEBIFDJM_00977 2.9e-38 ypbS S Protein of unknown function (DUF2533)
PEBIFDJM_00978 2e-07
PEBIFDJM_00979 1.5e-166 polA 2.7.7.7 L 5'3' exonuclease
PEBIFDJM_00981 8.5e-69 rnhA 3.1.26.4 L Ribonuclease
PEBIFDJM_00982 4.5e-106 ypdP S Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
PEBIFDJM_00983 1.7e-125 ypeP 3.1.26.4 L COG0328 Ribonuclease HI
PEBIFDJM_00984 3e-29 ypeQ S Zinc-finger
PEBIFDJM_00985 8.1e-31 S Protein of unknown function (DUF2564)
PEBIFDJM_00986 3.8e-16 degR
PEBIFDJM_00987 7.9e-31 cspD K Cold-shock protein
PEBIFDJM_00988 2e-216 ugtP 2.4.1.315 GT28 M Processive glucosyltransferase involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. Is able to successively transfer up to three glucosyl residues to diacylglycerol (DAG), thereby catalyzing the formation of beta-monoglucosyl-DAG (3-O-(beta-D-glucopyranosyl)-1,2-diacyl- sn-glycerol), beta-diglucosyl-DAG (3-O-(beta-D-glucopyranosyl- beta-(1- 6)-D-glucopyranosyl)-1,2-diacyl-sn-glycerol) and beta- triglucosyl-DAG (3-O-(beta-D-glucopyranosyl-beta-(1- 6)-D- glucopyranosyl-beta-(1- 6)-D-glucopyranosyl)-1,2-diacyl-sn- glycerol). Beta-diglucosyl-DAG is the predominant glycolipid found in Bacillales and is also used as a membrane anchor for lipoteichoic acid (LTA)
PEBIFDJM_00990 7.3e-177 metAA 2.3.1.46 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
PEBIFDJM_00991 1.7e-87 btuE 1.11.1.9 O Belongs to the glutathione peroxidase family
PEBIFDJM_00992 2.1e-106 ypgQ S phosphohydrolase
PEBIFDJM_00993 1.2e-155 ypgR C COG0694 Thioredoxin-like proteins and domains
PEBIFDJM_00994 0.0 ilvD 4.2.1.9 E Belongs to the IlvD Edd family
PEBIFDJM_00995 1.7e-75 yphP S Belongs to the UPF0403 family
PEBIFDJM_00996 1.3e-145 ypiP 2.1.1.242 AJ Putative SAM-dependent methyltransferase
PEBIFDJM_00997 7.8e-114 ypjP S YpjP-like protein
PEBIFDJM_00998 3.3e-92 pgpA 3.1.3.27 I COG1267 Phosphatidylglycerophosphatase A and related proteins
PEBIFDJM_00999 1.1e-155 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PEBIFDJM_01000 1.8e-92 folA 1.1.1.262, 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PEBIFDJM_01001 1.1e-110 ypkP 2.3.1.51 I Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
PEBIFDJM_01002 4.2e-110 hlyIII S protein, Hemolysin III
PEBIFDJM_01003 6.1e-185 pspF K Transcriptional regulator
PEBIFDJM_01004 4.4e-244 ilvA 4.3.1.19 E Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
PEBIFDJM_01005 3.1e-40 ypmP S Protein of unknown function (DUF2535)
PEBIFDJM_01006 9.7e-106 ypmQ S protein SCO1 SenC PrrC, involved in biogenesis of respiratory and photosynthetic systems
PEBIFDJM_01007 1.3e-137 ypmR E GDSL-like Lipase/Acylhydrolase
PEBIFDJM_01008 1.1e-98 ypmS S protein conserved in bacteria
PEBIFDJM_01009 5.5e-29 ypmT S Uncharacterized ympT
PEBIFDJM_01010 4.9e-222 mepA V MATE efflux family protein
PEBIFDJM_01011 1.6e-70 ypoP K transcriptional
PEBIFDJM_01012 7e-103 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
PEBIFDJM_01013 2.9e-78 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
PEBIFDJM_01014 2.5e-125 4.2.1.115 GM Polysaccharide biosynthesis protein
PEBIFDJM_01015 7.5e-211 phy 3.1.3.8 I Myo-inositol-hexaphosphate 3-phosphohydrolase
PEBIFDJM_01016 4.1e-186 cgeB S Spore maturation protein
PEBIFDJM_01017 1.2e-65 cgeA
PEBIFDJM_01018 5.9e-38 cgeC
PEBIFDJM_01019 7.2e-255 cgeD M maturation of the outermost layer of the spore
PEBIFDJM_01020 5.9e-143 yiiD K acetyltransferase
PEBIFDJM_01022 2.3e-248 yodT H Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PEBIFDJM_01023 6.5e-125 yodS 2.8.3.8, 2.8.3.9 I COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
PEBIFDJM_01024 8e-117 scoB 2.8.3.5, 2.8.3.8, 2.8.3.9 I COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
PEBIFDJM_01025 1.4e-258 yodQ 3.5.1.16 E Acetylornithine deacetylase
PEBIFDJM_01026 6.7e-153 yodP 2.3.1.264 K Acetyltransferase (GNAT) family
PEBIFDJM_01027 1.1e-277 kamA 5.4.3.2 E lysine 2,3-aminomutase
PEBIFDJM_01028 6.4e-47 yokU S YokU-like protein, putative antitoxin
PEBIFDJM_01029 1.4e-36 yozE S Belongs to the UPF0346 family
PEBIFDJM_01030 1.6e-123 yodN
PEBIFDJM_01032 6.3e-24 yozD S YozD-like protein
PEBIFDJM_01033 5.4e-107 yodM 3.6.1.27 I Acid phosphatase homologues
PEBIFDJM_01034 3.6e-54 yodL S YodL-like
PEBIFDJM_01035 5.3e-09
PEBIFDJM_01036 3.2e-127 deoD 2.4.2.1, 2.4.2.28 F Purine nucleoside phosphorylase
PEBIFDJM_01037 5.5e-139 vanY 3.4.17.14 M D-alanyl-D-alanine carboxypeptidase
PEBIFDJM_01038 5.2e-24 yodI
PEBIFDJM_01039 2.8e-128 yodH Q Methyltransferase
PEBIFDJM_01040 2.8e-252 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
PEBIFDJM_01041 5.6e-267 yodF E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PEBIFDJM_01042 6.2e-28 S Protein of unknown function (DUF3311)
PEBIFDJM_01043 6.7e-170 yodE E COG0346 Lactoylglutathione lyase and related lyases
PEBIFDJM_01044 2.1e-111 mhqD S Carboxylesterase
PEBIFDJM_01045 1.4e-107 yodC C nitroreductase
PEBIFDJM_01046 4.4e-55 yodB K transcriptional
PEBIFDJM_01047 8e-64 yodA S tautomerase
PEBIFDJM_01048 1.4e-205 gntP EG COG2610 H gluconate symporter and related permeases
PEBIFDJM_01049 3.4e-09
PEBIFDJM_01050 2.6e-61 yozR S COG0071 Molecular chaperone (small heat shock protein)
PEBIFDJM_01051 5.6e-161 rarD S -transporter
PEBIFDJM_01052 1.5e-43
PEBIFDJM_01053 2.2e-60 yojF S Protein of unknown function (DUF1806)
PEBIFDJM_01054 2.1e-125 yojG S deacetylase
PEBIFDJM_01055 3.2e-150 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PEBIFDJM_01056 7.2e-245 norM V Multidrug efflux pump
PEBIFDJM_01058 5.8e-109 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PEBIFDJM_01059 1.5e-230 yojK CG UDP-glucoronosyl and UDP-glucosyl transferase
PEBIFDJM_01060 3.9e-197 sle1 3.5.1.28 CBM50 M COG1388 FOG LysM repeat
PEBIFDJM_01061 6.6e-110 sodC 1.15.1.1 P Destroys radicals which are normally produced within the cells and which are toxic to biological systems
PEBIFDJM_01062 1.1e-161 yojN S ATPase family associated with various cellular activities (AAA)
PEBIFDJM_01063 0.0 yojO P Von Willebrand factor
PEBIFDJM_01064 0.0 sucA 1.2.4.2, 4.1.1.71 C The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components 2- oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3)
PEBIFDJM_01065 9.1e-194 sucB 2.3.1.61 C The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2)
PEBIFDJM_01066 1.1e-167 yocS S -transporter
PEBIFDJM_01067 4.5e-231 yocR S Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
PEBIFDJM_01068 1.3e-164 sodA 1.15.1.1 P Superoxide dismutase
PEBIFDJM_01069 0.0 sqhC 4.2.1.137, 5.4.99.7 I COG1657 Squalene cyclase
PEBIFDJM_01070 5.2e-289 dhaS 1.2.1.3, 1.2.1.39 C Belongs to the aldehyde dehydrogenase family
PEBIFDJM_01071 2.7e-31 yozC
PEBIFDJM_01072 4.2e-56 yozO S Bacterial PH domain
PEBIFDJM_01073 1.9e-36 yocN
PEBIFDJM_01074 1.1e-40 yozN
PEBIFDJM_01075 1.1e-86 yocM O Belongs to the small heat shock protein (HSP20) family
PEBIFDJM_01076 6.2e-32
PEBIFDJM_01077 6.4e-54 yocL
PEBIFDJM_01078 3.3e-83 dksA T general stress protein
PEBIFDJM_01079 7.9e-114 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PEBIFDJM_01080 0.0 recQ 3.6.4.12 L DNA helicase
PEBIFDJM_01081 7.1e-113 yocH CBM50 M COG1388 FOG LysM repeat
PEBIFDJM_01082 1e-105 desR T COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PEBIFDJM_01083 1.7e-196 desK 2.7.13.3 T Histidine kinase
PEBIFDJM_01084 1e-201 des 1.14.19.23, 1.14.19.45 I fatty acid desaturase
PEBIFDJM_01085 1.1e-186 yocD 3.4.17.13 V peptidase S66
PEBIFDJM_01086 3.6e-93 yocC
PEBIFDJM_01087 2.1e-143
PEBIFDJM_01088 1.5e-92 yozB S membrane
PEBIFDJM_01089 1.3e-117 pvaA M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
PEBIFDJM_01090 1e-51 czrA K transcriptional
PEBIFDJM_01091 7.2e-95 yobW
PEBIFDJM_01092 1.9e-175 yobV K WYL domain
PEBIFDJM_01093 7.1e-86 yobU K Bacterial transcription activator, effector binding domain
PEBIFDJM_01094 6.1e-131 yobT S COG0491 Zn-dependent hydrolases, including glyoxylases
PEBIFDJM_01095 3.3e-98 yobS K Transcriptional regulator
PEBIFDJM_01096 4.5e-140 yobR 2.3.1.1 J FR47-like protein
PEBIFDJM_01097 3.6e-134 yobQ K helix_turn_helix, arabinose operon control protein
PEBIFDJM_01098 9.3e-53 csaA 6.1.1.10, 6.1.1.20, 6.1.1.6 J tRNA-binding protein
PEBIFDJM_01099 1.5e-277 iaaM 1.4.3.4 E COG1231 Monoamine oxidase
PEBIFDJM_01100 5.1e-91 yokH G SMI1 / KNR4 family
PEBIFDJM_01101 6.5e-10 L A nuclease of the HNH/ENDO VII superfamily with conserved LHH
PEBIFDJM_01102 1.5e-19
PEBIFDJM_01104 6e-46
PEBIFDJM_01106 8.1e-208 dinB2 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
PEBIFDJM_01108 4.1e-206 S aspartate phosphatase
PEBIFDJM_01116 7.8e-08
PEBIFDJM_01124 2e-08
PEBIFDJM_01128 2.7e-143 spo0M S COG4326 Sporulation control protein
PEBIFDJM_01129 1.2e-26
PEBIFDJM_01130 2.7e-131 pepE 3.4.11.2, 3.4.13.21 E Belongs to the peptidase S51 family
PEBIFDJM_01131 0.0 thiC 4.1.99.17 H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
PEBIFDJM_01132 2.2e-262 ygaK C Berberine and berberine like
PEBIFDJM_01134 7.9e-290 katA 1.11.1.6 P serves to protect cells from the toxic effects of hydrogen peroxide
PEBIFDJM_01135 6.2e-144 ssuB P COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component
PEBIFDJM_01136 2.1e-169 ssuA M Sulfonate ABC transporter
PEBIFDJM_01137 2.5e-147 ssuC P COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component
PEBIFDJM_01138 5.3e-217 ssuD 1.14.14.5 C Catalyzes the desulfonation of aliphatic sulfonates
PEBIFDJM_01140 5e-41 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PEBIFDJM_01141 1.7e-76 ygaO
PEBIFDJM_01142 4.4e-29 K Transcriptional regulator
PEBIFDJM_01144 1.9e-112 yhzB S B3/4 domain
PEBIFDJM_01145 3.9e-223 queG 1.17.99.6 C Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
PEBIFDJM_01146 1.1e-175 yhbB S Putative amidase domain
PEBIFDJM_01147 1.3e-84 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
PEBIFDJM_01148 2.3e-108 yhbD K Protein of unknown function (DUF4004)
PEBIFDJM_01149 1.4e-61 yhbE M COG1664 Integral membrane protein CcmA involved in cell shape determination
PEBIFDJM_01150 7.2e-71 yhbF M COG1664 Integral membrane protein CcmA involved in cell shape determination
PEBIFDJM_01151 0.0 prkA T Ser protein kinase
PEBIFDJM_01152 2.5e-225 yhbH S Belongs to the UPF0229 family
PEBIFDJM_01153 8.3e-76 yhbI K DNA-binding transcription factor activity
PEBIFDJM_01154 4e-97 yhbJ V COG1566 Multidrug resistance efflux pump
PEBIFDJM_01155 3.1e-271 yhcA EGP Major facilitator Superfamily
PEBIFDJM_01156 1.4e-98 yhcB 1.6.5.2 S Belongs to the WrbA family
PEBIFDJM_01157 2.8e-37 yhcC
PEBIFDJM_01158 1.3e-54
PEBIFDJM_01159 6.6e-60 yhcF K Transcriptional regulator
PEBIFDJM_01160 4e-122 yhcG V ABC transporter, ATP-binding protein
PEBIFDJM_01161 7.7e-166 yhcH V ABC transporter, ATP-binding protein
PEBIFDJM_01162 5.6e-164 yhcI S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PEBIFDJM_01163 1e-30 cspB K Cold-shock protein
PEBIFDJM_01164 2.2e-151 metQ M Belongs to the nlpA lipoprotein family
PEBIFDJM_01165 3.4e-197 yhcK 2.7.7.65 T COG2199 FOG GGDEF domain
PEBIFDJM_01166 6.3e-220 ydjN U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PEBIFDJM_01167 1.1e-40 yhcM
PEBIFDJM_01168 6e-68 yhcN S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PEBIFDJM_01169 7.3e-167 yhcP
PEBIFDJM_01170 1.5e-99 yhcQ M Spore coat protein
PEBIFDJM_01171 0.0 yhcR 3.1.3.5, 3.1.31.1 F Belongs to the 5'-nucleotidase family
PEBIFDJM_01172 3.9e-102 yhcS 3.4.22.70 M COG3764 Sortase (surface protein transpeptidase)
PEBIFDJM_01173 7.9e-171 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PEBIFDJM_01174 6e-67 yhcU S Family of unknown function (DUF5365)
PEBIFDJM_01175 3.8e-67 yhcV S COG0517 FOG CBS domain
PEBIFDJM_01176 1.3e-119 yhcW 5.4.2.6 S hydrolase
PEBIFDJM_01177 2.7e-304 yhcX 3.5.1.3 K Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
PEBIFDJM_01178 5.4e-261 yhxA E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PEBIFDJM_01179 5.2e-104 glpP K Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
PEBIFDJM_01180 1.9e-152 glpF G Belongs to the MIP aquaporin (TC 1.A.8) family
PEBIFDJM_01181 4.6e-293 glpK 2.7.1.30 C Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
PEBIFDJM_01182 0.0 glpD 1.1.5.3 C Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
PEBIFDJM_01183 0.0 pmmB 5.4.2.2, 5.4.2.8 G Phosphoglucomutase
PEBIFDJM_01184 1.4e-212 yhcY 2.7.13.3 T Histidine kinase
PEBIFDJM_01185 1.7e-111 yhcZ K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PEBIFDJM_01186 1.9e-84 azr 1.7.1.6 S NADPH-dependent FMN reductase
PEBIFDJM_01187 1.2e-38 yhdB S YhdB-like protein
PEBIFDJM_01188 4.5e-52 yhdC S Protein of unknown function (DUF3889)
PEBIFDJM_01189 2.3e-188 cwlS 3.5.1.28 CBM50 M COG1388 FOG LysM repeat
PEBIFDJM_01190 1e-75 nsrR K Transcriptional regulator
PEBIFDJM_01191 1.3e-237 ygxB M Conserved TM helix
PEBIFDJM_01192 2.1e-276 ycgB S Stage V sporulation protein R
PEBIFDJM_01193 5.4e-256 phoB 3.1.3.1 P Belongs to the alkaline phosphatase family
PEBIFDJM_01194 2.5e-141 lytE 3.5.1.28 CBM50 M COG1388 FOG LysM repeat
PEBIFDJM_01195 3.8e-162 citR K Transcriptional regulator
PEBIFDJM_01196 1.2e-205 citA 2.3.3.1 C Belongs to the citrate synthase family
PEBIFDJM_01197 9.2e-161 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PEBIFDJM_01198 1e-249 yhdG E amino acid
PEBIFDJM_01199 1.3e-241 yhdH S Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family
PEBIFDJM_01200 7.2e-272 ydeL K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PEBIFDJM_01201 5.5e-74 BH1582 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PEBIFDJM_01202 8.1e-45 yhdK S Sigma-M inhibitor protein
PEBIFDJM_01203 2.5e-200 yhdL S Sigma factor regulator N-terminal
PEBIFDJM_01204 5.5e-86 sigM K Belongs to the sigma-70 factor family. ECF subfamily
PEBIFDJM_01205 6.3e-190 yhdN C Aldo keto reductase
PEBIFDJM_01206 3e-110 plsC 2.3.1.51 I Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family
PEBIFDJM_01207 3.1e-240 corC1 S COG1253 Hemolysins and related proteins containing CBS domains
PEBIFDJM_01208 4.1e-74 cueR K transcriptional
PEBIFDJM_01209 1.7e-221 yhdR 2.6.1.1 E Aminotransferase
PEBIFDJM_01210 5.6e-245 corC1 P COG1253 Hemolysins and related proteins containing CBS domains
PEBIFDJM_01211 4.9e-44 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PEBIFDJM_01212 4.3e-65 crcB D Important for reducing fluoride concentration in the cell, thus reducing its toxicity
PEBIFDJM_01213 6.2e-134 yhdW 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PEBIFDJM_01215 5.6e-203 yhdY M Mechanosensitive ion channel
PEBIFDJM_01216 2.6e-140 cobB K NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form
PEBIFDJM_01217 1.7e-151 yheN G deacetylase
PEBIFDJM_01218 1.2e-152 dat 2.6.1.21 E Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha- keto acid in the first half-reaction
PEBIFDJM_01219 3.5e-231 nhaC C Na H antiporter
PEBIFDJM_01220 3.4e-84 nhaX T Belongs to the universal stress protein A family
PEBIFDJM_01221 0.0 yheI V COG1132 ABC-type multidrug transport system, ATPase and permease components
PEBIFDJM_01222 0.0 yheH V COG1132 ABC-type multidrug transport system, ATPase and permease components
PEBIFDJM_01223 2.9e-108 yheG GM NAD(P)H-binding
PEBIFDJM_01224 6.3e-28 sspB S spore protein
PEBIFDJM_01225 1.3e-36 yheE S Family of unknown function (DUF5342)
PEBIFDJM_01226 4.6e-268 gshB 6.3.2.2, 6.3.2.3 HJ YheC/D like ATP-grasp
PEBIFDJM_01227 4.3e-216 yheC HJ YheC/D like ATP-grasp
PEBIFDJM_01228 2.2e-202 yheB S Belongs to the UPF0754 family
PEBIFDJM_01229 9.5e-48 yheA S Belongs to the UPF0342 family
PEBIFDJM_01230 9.8e-205 yhaZ L DNA alkylation repair enzyme
PEBIFDJM_01231 4.3e-142 yhaX S haloacid dehalogenase-like hydrolase
PEBIFDJM_01232 4.6e-293 hemZ H coproporphyrinogen III oxidase
PEBIFDJM_01233 2.2e-208 yhaU P COG0475 Kef-type K transport systems, membrane components
PEBIFDJM_01234 7.8e-88 yhaT P regulatory, ligand-binding protein related to C-terminal domains of K channels
PEBIFDJM_01236 2.1e-132 yhaR 5.3.3.18 I enoyl-CoA hydratase
PEBIFDJM_01237 1.1e-26 S YhzD-like protein
PEBIFDJM_01238 1.8e-167 yhaQ S ABC transporter, ATP-binding protein
PEBIFDJM_01239 4.2e-215 yhaP CP COG1668 ABC-type Na efflux pump, permease component
PEBIFDJM_01240 8.2e-224 yhaO L DNA repair exonuclease
PEBIFDJM_01241 0.0 yhaN L AAA domain
PEBIFDJM_01242 1.5e-177 yhaM L Shows a 3'-5' exoribonuclease activity
PEBIFDJM_01243 1.6e-21 yhaL S Sporulation protein YhaL
PEBIFDJM_01244 3.2e-116 prsA 5.2.1.8 M plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
PEBIFDJM_01245 8.7e-90 yhaK S Putative zincin peptidase
PEBIFDJM_01246 1.3e-54 yhaI S Protein of unknown function (DUF1878)
PEBIFDJM_01247 1e-113 hpr K Negative regulator of protease production and sporulation
PEBIFDJM_01248 7e-39 yhaH S YtxH-like protein
PEBIFDJM_01249 3.6e-80 trpP S Tryptophan transporter TrpP
PEBIFDJM_01250 2.4e-203 serC 2.6.1.52 E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
PEBIFDJM_01251 4.7e-81 hit FG COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
PEBIFDJM_01252 8.8e-136 ecsA V transporter (ATP-binding protein)
PEBIFDJM_01253 5.9e-214 ecsB U ABC transporter
PEBIFDJM_01254 6.9e-114 ecsC S EcsC protein family
PEBIFDJM_01255 8.3e-229 yhaA 3.5.1.47 E COG1473 Metal-dependent amidase aminoacylase carboxypeptidase
PEBIFDJM_01256 7.4e-245 yhfA C membrane
PEBIFDJM_01257 1.2e-30 1.15.1.2 C Rubrerythrin
PEBIFDJM_01258 2.9e-90 traP 1.14.99.57, 6.2.1.3 S enzyme involved in biosynthesis of extracellular polysaccharides
PEBIFDJM_01259 0.0 pbpF 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PEBIFDJM_01260 6.3e-204 hemE 4.1.1.37 H Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
PEBIFDJM_01261 3.6e-179 hemH 4.99.1.1, 4.99.1.9 H Catalyzes the ferrous insertion into protoporphyrin IX
PEBIFDJM_01262 3.5e-266 hemG 1.14.19.9, 1.3.3.15, 1.3.3.4 H Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
PEBIFDJM_01263 2.7e-100 yhgD K Transcriptional regulator
PEBIFDJM_01264 3.8e-238 yhgE S YhgE Pip N-terminal domain protein
PEBIFDJM_01265 6.7e-184 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PEBIFDJM_01266 4.9e-137 yhfC S Putative membrane peptidase family (DUF2324)
PEBIFDJM_01267 1e-198 yhfE 3.2.1.4 GH5,GH9 G peptidase M42
PEBIFDJM_01268 8.4e-72 3.4.13.21 S ASCH
PEBIFDJM_01269 3.8e-227 gltP C Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PEBIFDJM_01270 6.8e-141 yhfI S COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III
PEBIFDJM_01271 1.7e-190 lplJ 6.3.1.20 H Lipoate-protein ligase
PEBIFDJM_01272 1.9e-110 yhfK GM NmrA-like family
PEBIFDJM_01273 2e-299 fadD 6.2.1.3 IQ AMP-binding enzyme C-terminal domain
PEBIFDJM_01274 1.9e-65 yhfM
PEBIFDJM_01275 5.3e-237 yhfN 3.4.24.84 O Peptidase M48
PEBIFDJM_01276 2.3e-204 aprE 3.4.21.62 O Belongs to the peptidase S8 family
PEBIFDJM_01277 4.3e-77 VY92_01935 K acetyltransferase
PEBIFDJM_01278 1.8e-181 yhfP 1.1.1.1 C Quinone oxidoreductase
PEBIFDJM_01279 4.3e-159 yfmC M Periplasmic binding protein
PEBIFDJM_01280 1.9e-109 yhfR 3.1.3.73 G Belongs to the phosphoglycerate mutase family
PEBIFDJM_01281 1.1e-195 vraB 2.3.1.9 I Belongs to the thiolase family
PEBIFDJM_01282 4.3e-272 yhfT 6.2.1.3 IQ AMP-binding enzyme C-terminal domain
PEBIFDJM_01283 4.2e-90 bioY S BioY family
PEBIFDJM_01284 1.7e-182 hemAT NT chemotaxis protein
PEBIFDJM_01285 2.6e-299 yhfW CE COG0665 Glycine D-amino acid oxidases (deaminating)
PEBIFDJM_01286 1.6e-157 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PEBIFDJM_01287 1.3e-32 yhzC S IDEAL
PEBIFDJM_01288 4.2e-109 comK K Competence transcription factor
PEBIFDJM_01289 2.1e-168 IQ Enoyl-(Acyl carrier protein) reductase
PEBIFDJM_01290 7.8e-42 yhjA S Excalibur calcium-binding domain
PEBIFDJM_01291 5.7e-264 yhjB E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PEBIFDJM_01292 6.9e-27 yhjC S Protein of unknown function (DUF3311)
PEBIFDJM_01293 6.7e-60 yhjD
PEBIFDJM_01294 9.1e-110 yhjE S SNARE associated Golgi protein
PEBIFDJM_01295 3.4e-91 sipV 3.4.21.89 U Belongs to the peptidase S26 family
PEBIFDJM_01296 6.2e-282 yhjG CH FAD binding domain
PEBIFDJM_01297 6.5e-93 yhjH K helix_turn_helix multiple antibiotic resistance protein
PEBIFDJM_01298 4.9e-213 glcP G Major Facilitator Superfamily
PEBIFDJM_01299 5.5e-200 thuB 1.1.1.361 S Oxidoreductase family, C-terminal alpha/beta domain
PEBIFDJM_01300 2.6e-160 ntdB 3.1.3.92 S Sucrose-6F-phosphate phosphohydrolase
PEBIFDJM_01301 1.1e-253 ntdA 2.6.1.104 E Belongs to the DegT DnrJ EryC1 family
PEBIFDJM_01302 2.9e-187 yhjM 5.1.1.1 K Transcriptional regulator
PEBIFDJM_01303 4.2e-201 abrB S membrane
PEBIFDJM_01304 1.1e-212 EGP Transmembrane secretion effector
PEBIFDJM_01305 0.0 S Sugar transport-related sRNA regulator N-term
PEBIFDJM_01306 2.2e-78 yhjR S Rubrerythrin
PEBIFDJM_01307 0.0 addB 3.1.21.3, 3.6.4.12 L ATP-dependent helicase deoxyribonuclease subunit B
PEBIFDJM_01308 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
PEBIFDJM_01309 3.7e-221 sbcD L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity
PEBIFDJM_01310 0.0 sbcC L COG0419 ATPase involved in DNA repair
PEBIFDJM_01311 2.1e-48 yisB V COG1403 Restriction endonuclease
PEBIFDJM_01312 4.5e-32 gerPF S Spore germination protein gerPA/gerPF
PEBIFDJM_01313 2e-65 gerPE S Spore germination protein GerPE
PEBIFDJM_01314 6.3e-24 gerPD S Spore germination protein
PEBIFDJM_01315 1.8e-54 gerPC S Spore germination protein
PEBIFDJM_01316 4e-34 gerPB S cell differentiation
PEBIFDJM_01317 1.9e-33 gerPA S Spore germination protein
PEBIFDJM_01318 1.5e-22 yisI S Spo0E like sporulation regulatory protein
PEBIFDJM_01319 6.1e-171 cotH M Spore Coat
PEBIFDJM_01320 6e-171 yisK Q COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
PEBIFDJM_01321 3e-57 yisL S UPF0344 protein
PEBIFDJM_01322 0.0 wprA O Belongs to the peptidase S8 family
PEBIFDJM_01323 4.8e-102 yisN S Protein of unknown function (DUF2777)
PEBIFDJM_01324 0.0 asnO 6.3.5.4 E Asparagine synthase
PEBIFDJM_01325 2.1e-88 yizA S Damage-inducible protein DinB
PEBIFDJM_01326 7.7e-146 crtB 2.5.1.21, 2.5.1.32, 2.5.1.99 I phytoene
PEBIFDJM_01327 4e-243 yisQ V Mate efflux family protein
PEBIFDJM_01328 2.7e-160 yisR K Transcriptional regulator
PEBIFDJM_01329 1.3e-182 purR K helix_turn _helix lactose operon repressor
PEBIFDJM_01330 1.4e-192 yisS 1.1.1.370 S Oxidoreductase family, C-terminal alpha/beta domain
PEBIFDJM_01331 3.1e-92 yisT S DinB family
PEBIFDJM_01332 1.9e-107 argO S Lysine exporter protein LysE YggA
PEBIFDJM_01333 1.2e-277 yisV K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PEBIFDJM_01334 2e-35 mcbG S Pentapeptide repeats (9 copies)
PEBIFDJM_01335 4.1e-155 yisY I hydrolases or acyltransferases (alpha beta hydrolase superfamily)
PEBIFDJM_01336 1.4e-112 cysC 1.8.4.10, 1.8.4.8, 2.7.1.25, 2.7.7.4 P Catalyzes the synthesis of activated sulfate
PEBIFDJM_01337 2.7e-232 sat 2.7.7.4 P Belongs to the sulfate adenylyltransferase family
PEBIFDJM_01338 2.1e-142 cysH 1.8.4.10, 1.8.4.8, 2.7.1.25 EH Belongs to the PAPS reductase family. CysH subfamily
PEBIFDJM_01339 1.6e-120 comB 3.1.3.71 H Belongs to the ComB family
PEBIFDJM_01340 7.1e-141 yitD 4.4.1.19 S synthase
PEBIFDJM_01341 1.9e-107 yitE S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PEBIFDJM_01342 5.6e-219 yitF 5.5.1.27 M Belongs to the mandelate racemase muconate lactonizing enzyme family
PEBIFDJM_01343 5.7e-228 yitG EGP Major facilitator Superfamily
PEBIFDJM_01344 1.3e-154 yitH K Acetyltransferase (GNAT) domain
PEBIFDJM_01345 8.6e-70 yjcF S Acetyltransferase (GNAT) domain
PEBIFDJM_01346 0.0 yitJ 1.5.1.20, 2.1.1.10, 2.1.1.13 E Catalyzes the formation of 5,10-methylenetetrahydrofolate from 5-methyltetrahydrofolate and S-adenosyl-L-homocysteine and methionine from S-adenosyl-L-methionine and L-homocysteine
PEBIFDJM_01347 9.5e-54 yajQ S Belongs to the UPF0234 family
PEBIFDJM_01348 6.9e-161 cvfB S protein conserved in bacteria
PEBIFDJM_01349 2.5e-93
PEBIFDJM_01350 1.4e-170
PEBIFDJM_01351 7.6e-97 S Sporulation delaying protein SdpA
PEBIFDJM_01352 1.5e-58 K Transcriptional regulator PadR-like family
PEBIFDJM_01353 2.9e-94
PEBIFDJM_01354 1.4e-44 yitR S Domain of unknown function (DUF3784)
PEBIFDJM_01355 4.6e-307 nprB 3.4.24.28 E Peptidase M4
PEBIFDJM_01356 1.4e-158 yitS S protein conserved in bacteria
PEBIFDJM_01357 6.6e-148 yitT S Uncharacterized protein conserved in bacteria (DUF2179)
PEBIFDJM_01358 2.9e-73 ipi S Intracellular proteinase inhibitor
PEBIFDJM_01359 1.2e-17 S Protein of unknown function (DUF3813)
PEBIFDJM_01361 2.1e-154 yitU 3.1.3.104 S hydrolases of the HAD superfamily
PEBIFDJM_01362 1e-142 yjfP S COG1073 Hydrolases of the alpha beta superfamily
PEBIFDJM_01363 6.2e-51 yitW S metal-sulfur cluster biosynthetic enzyme
PEBIFDJM_01364 1.5e-22 pilT S Proteolipid membrane potential modulator
PEBIFDJM_01365 1.9e-267 yitY C D-arabinono-1,4-lactone oxidase
PEBIFDJM_01366 1.7e-88 norB G Major Facilitator Superfamily
PEBIFDJM_01367 4.3e-197 argC 1.2.1.38 E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
PEBIFDJM_01368 2e-230 argJ 2.3.1.1, 2.3.1.35, 2.7.2.8 E Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
PEBIFDJM_01369 4.1e-136 argB 2.7.2.8 E Belongs to the acetylglutamate kinase family. ArgB subfamily
PEBIFDJM_01370 6.4e-218 argD 2.6.1.11, 2.6.1.17 E acetylornithine aminotransferase
PEBIFDJM_01371 1.1e-205 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PEBIFDJM_01372 0.0 carB 6.3.5.5 EF Carbamoyl-phosphate synthetase ammonia chain
PEBIFDJM_01373 1.2e-174 argF 2.1.3.3 E Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
PEBIFDJM_01374 9.5e-28 yjzC S YjzC-like protein
PEBIFDJM_01375 2.3e-16 yjzD S Protein of unknown function (DUF2929)
PEBIFDJM_01376 3.1e-141 yjaU I carboxylic ester hydrolase activity
PEBIFDJM_01377 1.5e-100 yjaV
PEBIFDJM_01378 2.5e-183 med S Transcriptional activator protein med
PEBIFDJM_01379 7.3e-26 comZ S ComZ
PEBIFDJM_01380 2.4e-20 yjzB
PEBIFDJM_01381 3.9e-173 fabH 2.3.1.180 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
PEBIFDJM_01382 6.8e-234 fabF 2.3.1.179 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PEBIFDJM_01383 7.3e-149 yjaZ O Zn-dependent protease
PEBIFDJM_01384 3.9e-184 appD P Belongs to the ABC transporter superfamily
PEBIFDJM_01385 2.7e-185 appF E Belongs to the ABC transporter superfamily
PEBIFDJM_01386 2.4e-287 appA E COG0747 ABC-type dipeptide transport system, periplasmic component
PEBIFDJM_01387 7.7e-169 oppB P COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PEBIFDJM_01388 7.9e-163 appC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PEBIFDJM_01389 5.5e-146 yjbA S Belongs to the UPF0736 family
PEBIFDJM_01390 6.1e-185 trpS 6.1.1.2 J Tryptophanyl-tRNA synthetase
PEBIFDJM_01391 9.4e-308 oppA E ABC transporter substrate-binding protein
PEBIFDJM_01392 8.7e-165 oppB P COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PEBIFDJM_01393 5e-165 oppC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PEBIFDJM_01394 6.8e-198 oppD P Belongs to the ABC transporter superfamily
PEBIFDJM_01395 5.5e-172 oppF E Belongs to the ABC transporter superfamily
PEBIFDJM_01396 8.3e-205 yjbB EGP Major Facilitator Superfamily
PEBIFDJM_01397 2.6e-103 yjbC K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PEBIFDJM_01398 2.1e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
PEBIFDJM_01399 2.3e-111 yjbE P Integral membrane protein TerC family
PEBIFDJM_01400 4.4e-115 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC
PEBIFDJM_01401 2e-219 yjbF S Competence protein
PEBIFDJM_01402 0.0 pepF E oligoendopeptidase F
PEBIFDJM_01403 1.8e-20
PEBIFDJM_01404 1.2e-168 yjbH Q dithiol-disulfide isomerase involved in polyketide biosynthesis
PEBIFDJM_01405 3.7e-72 yjbI S Bacterial-like globin
PEBIFDJM_01406 3.1e-85 yjbJ M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
PEBIFDJM_01407 1.2e-100 yjbK S protein conserved in bacteria
PEBIFDJM_01408 7.1e-62 yjbL S Belongs to the UPF0738 family
PEBIFDJM_01409 2.6e-112 yjbM 2.7.6.5 S GTP pyrophosphokinase
PEBIFDJM_01410 2.1e-151 nadK 2.7.1.23 G Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
PEBIFDJM_01411 1.2e-158 yjbO 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PEBIFDJM_01412 5.1e-128 prpE 3.1.3.16, 3.6.1.41 T Asymmetrically hydrolyzes Ap4p to yield AMP and ATP
PEBIFDJM_01413 0.0 yjbQ P Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family
PEBIFDJM_01414 3.4e-137 tenA 3.5.99.2 K Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
PEBIFDJM_01415 1.4e-107 tenI 2.5.1.3, 5.3.99.10 H Transcriptional regulator TenI
PEBIFDJM_01416 9.8e-216 thiO 1.4.3.19 E Glycine oxidase
PEBIFDJM_01417 2.6e-29 thiS H thiamine diphosphate biosynthetic process
PEBIFDJM_01418 1.5e-135 thiG 2.8.1.10 H Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S
PEBIFDJM_01419 2.3e-187 thiF 2.7.7.73, 2.7.7.80 H COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
PEBIFDJM_01420 2e-149 thiD 2.5.1.3, 2.7.1.35, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PEBIFDJM_01421 3.2e-141 fabI 1.3.1.10, 1.3.1.9 I Enoyl- acyl-carrier-protein reductase NADH
PEBIFDJM_01422 5.9e-54 yjbX S Spore coat protein
PEBIFDJM_01423 5.2e-83 cotZ S Spore coat protein
PEBIFDJM_01424 7.6e-96 cotY S Spore coat protein Z
PEBIFDJM_01425 6.4e-77 cotX S Spore Coat Protein X and V domain
PEBIFDJM_01426 8.5e-32 cotW
PEBIFDJM_01427 2.3e-55 cotV S Spore Coat Protein X and V domain
PEBIFDJM_01428 4.3e-56 yjcA S Protein of unknown function (DUF1360)
PEBIFDJM_01431 2.9e-38 spoVIF S Stage VI sporulation protein F
PEBIFDJM_01432 0.0 yjcD 3.6.4.12 L DNA helicase
PEBIFDJM_01433 1.7e-38
PEBIFDJM_01434 5.1e-72 yjcF S COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PEBIFDJM_01435 2.9e-93 yjcG J Belongs to the 2H phosphoesterase superfamily. YjcG family
PEBIFDJM_01436 2.6e-137 yjcH P COG2382 Enterochelin esterase and related enzymes
PEBIFDJM_01437 3.8e-215 metB 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PEBIFDJM_01438 1.9e-217 metC 2.5.1.48, 4.4.1.1, 4.4.1.2, 4.4.1.8 E cystathionine
PEBIFDJM_01439 1.7e-96 rimJ 2.3.1.128 J Alanine acetyltransferase
PEBIFDJM_01440 7e-212 yjcL S Protein of unknown function (DUF819)
PEBIFDJM_01442 3.4e-10
PEBIFDJM_01443 1.7e-40
PEBIFDJM_01444 2.9e-244 M nucleic acid phosphodiester bond hydrolysis
PEBIFDJM_01446 3.7e-30 KLT Protein tyrosine kinase
PEBIFDJM_01447 4.3e-11 S YolD-like protein
PEBIFDJM_01448 1.2e-35
PEBIFDJM_01449 9e-19
PEBIFDJM_01451 1.1e-46 yjcS S Antibiotic biosynthesis monooxygenase
PEBIFDJM_01452 2e-140 IQ Enoyl-(Acyl carrier protein) reductase
PEBIFDJM_01454 0.0 manR 2.7.1.200, 2.7.1.202 GKT transcriptional antiterminator
PEBIFDJM_01455 0.0 manP 2.7.1.191, 2.7.1.202 G phosphotransferase system
PEBIFDJM_01456 8.7e-189 manA 5.3.1.8 G mannose-6-phosphate isomerase
PEBIFDJM_01457 4.5e-49 yjdF S Protein of unknown function (DUF2992)
PEBIFDJM_01458 6.9e-92 yjdG 2.3.1.128 J Acetyltransferase (GNAT) domain
PEBIFDJM_01460 2.6e-80 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
PEBIFDJM_01461 4.2e-29 S Domain of unknown function (DUF4177)
PEBIFDJM_01462 2.3e-51 yjdJ S Domain of unknown function (DUF4306)
PEBIFDJM_01463 7.3e-175 cyoE 2.5.1.141 O Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
PEBIFDJM_01465 4.9e-265 xynD 3.5.1.104 G Polysaccharide deacetylase
PEBIFDJM_01466 2.1e-82 S Protein of unknown function (DUF2690)
PEBIFDJM_01467 2.3e-20 yjfB S Putative motility protein
PEBIFDJM_01468 1.4e-167 yjfC O Predicted Zn-dependent protease (DUF2268)
PEBIFDJM_01469 1.2e-45 T PhoQ Sensor
PEBIFDJM_01470 9.9e-103 yjgB S Domain of unknown function (DUF4309)
PEBIFDJM_01471 0.0 yjgC 1.17.1.10, 1.17.1.9 C formate dehydrogenase (NAD+) activity
PEBIFDJM_01472 4.3e-95 yjgD S Protein of unknown function (DUF1641)
PEBIFDJM_01473 8.7e-07 S Domain of unknown function (DUF4352)
PEBIFDJM_01474 1.3e-116 yjhB 3.6.1.13, 3.6.1.55 F ADP-ribose pyrophosphatase
PEBIFDJM_01476 2.3e-223 yjiB 1.14.13.154, 1.14.15.8 C Cytochrome P450
PEBIFDJM_01477 8.5e-218 oleD GT1 CG COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
PEBIFDJM_01478 8.2e-30
PEBIFDJM_01479 3.1e-142 hemD 2.1.1.107, 4.2.1.75 H Uroporphyrinogen-III synthase
PEBIFDJM_01480 3.3e-122 ybbM S transport system, permease component
PEBIFDJM_01481 1.8e-133 pstB 3.6.3.27 P ATPases associated with a variety of cellular activities
PEBIFDJM_01482 7.4e-175 yjlA EG Putative multidrug resistance efflux transporter
PEBIFDJM_01483 1.6e-88 yjlB S Cupin domain
PEBIFDJM_01484 7.1e-66 yjlC S Protein of unknown function (DUF1641)
PEBIFDJM_01485 6.5e-218 yjlD 1.6.99.3 C NADH dehydrogenase
PEBIFDJM_01486 8.7e-278 uxaC 5.3.1.12 G glucuronate isomerase
PEBIFDJM_01487 4.6e-247 yjmB G symporter YjmB
PEBIFDJM_01488 2.7e-188 yjmC 1.1.1.350 C Belongs to the LDH2 MDH2 oxidoreductase family
PEBIFDJM_01489 1.6e-193 rspB 1.1.1.380 E Alcohol dehydrogenase GroES-like domain
PEBIFDJM_01490 2.3e-214 uxuA 4.2.1.8 G Catalyzes the dehydration of D-mannonate
PEBIFDJM_01491 2.3e-153 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PEBIFDJM_01492 1.1e-226 exuT G Sugar (and other) transporter
PEBIFDJM_01493 3.1e-184 exuR K transcriptional
PEBIFDJM_01494 1.1e-280 uxaB 1.1.1.17, 1.1.1.58 G tagaturonate reductase activity
PEBIFDJM_01495 4.9e-287 uxaA 4.2.1.7, 4.4.1.24 G Altronate
PEBIFDJM_01496 4.3e-130 MA20_18170 S membrane transporter protein
PEBIFDJM_01497 2.3e-78 yjoA S DinB family
PEBIFDJM_01498 3.3e-244 ftsH2 3.4.21.53 O AAA domain (dynein-related subfamily)
PEBIFDJM_01499 1e-212 S response regulator aspartate phosphatase
PEBIFDJM_01501 5.3e-40 S YCII-related domain
PEBIFDJM_01502 9.4e-167 xlyA 3.5.1.28 CBM50 M N-acetylmuramoyl-L-alanine amidase
PEBIFDJM_01503 6.1e-61 yjqA S Bacterial PH domain
PEBIFDJM_01504 1.3e-110 yjqB S Pfam:DUF867
PEBIFDJM_01505 1.7e-159 ydbD P Catalase
PEBIFDJM_01506 1.6e-111 xkdA E IrrE N-terminal-like domain
PEBIFDJM_01507 3.2e-56 xre K Helix-turn-helix XRE-family like proteins
PEBIFDJM_01509 2.3e-156 xkdB K sequence-specific DNA binding
PEBIFDJM_01510 1.2e-117 xkdC L Bacterial dnaA protein
PEBIFDJM_01513 4.6e-10 yqaO S Phage-like element PBSX protein XtrA
PEBIFDJM_01514 7.7e-83 xpf K COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
PEBIFDJM_01515 5.3e-139 xtmA L phage terminase small subunit
PEBIFDJM_01516 6.2e-254 xtmB S phage terminase, large subunit
PEBIFDJM_01517 3.5e-285 yqbA S portal protein
PEBIFDJM_01518 4.1e-134 yqbD 2.1.1.72 L Putative phage serine protease XkdF
PEBIFDJM_01519 5.8e-169 xkdG S Phage capsid family
PEBIFDJM_01520 5.6e-62 yqbG S Protein of unknown function (DUF3199)
PEBIFDJM_01521 8.7e-65 yqbH S Domain of unknown function (DUF3599)
PEBIFDJM_01522 9.9e-88 xkdI S Bacteriophage HK97-gp10, putative tail-component
PEBIFDJM_01523 3.2e-77 xkdJ
PEBIFDJM_01524 2.5e-256 xkdK S Phage tail sheath C-terminal domain
PEBIFDJM_01525 6.1e-76 xkdM S Phage tail tube protein
PEBIFDJM_01526 1.9e-77 S Phage XkdN-like tail assembly chaperone protein, TAC
PEBIFDJM_01527 0.0 xkdO L Transglycosylase SLT domain
PEBIFDJM_01528 3.9e-119 xkdP S Lysin motif
PEBIFDJM_01529 6.2e-182 yqbQ 3.2.1.96 G NLP P60 protein
PEBIFDJM_01530 2.1e-39 xkdR S Protein of unknown function (DUF2577)
PEBIFDJM_01531 1.6e-70 xkdS S Protein of unknown function (DUF2634)
PEBIFDJM_01532 6e-191 xkdT S Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
PEBIFDJM_01533 1.3e-102 xkdU S Uncharacterised protein conserved in bacteria (DUF2313)
PEBIFDJM_01534 1.5e-40
PEBIFDJM_01535 0.0
PEBIFDJM_01536 1.6e-52 xkdW S XkdW protein
PEBIFDJM_01537 1.4e-22 xkdX
PEBIFDJM_01538 1.5e-152 xepA
PEBIFDJM_01539 2.8e-39 xhlA S Haemolysin XhlA
PEBIFDJM_01540 9.3e-40 xhlB S SPP1 phage holin
PEBIFDJM_01541 1.2e-163 xlyA 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
PEBIFDJM_01542 6.7e-23 spoIISB S Stage II sporulation protein SB
PEBIFDJM_01543 1.8e-136 spoIISA S Toxin SpoIISA, type II toxin-antitoxin system
PEBIFDJM_01544 5.8e-175 pit P phosphate transporter
PEBIFDJM_01545 6.9e-110 ykaA P COG1392 Phosphate transport regulator (distant homolog of PhoU)
PEBIFDJM_01546 9.8e-239 steT E amino acid
PEBIFDJM_01547 9.4e-183 mhqA E COG0346 Lactoylglutathione lyase and related lyases
PEBIFDJM_01548 0.0 ykcB M COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PEBIFDJM_01549 8.4e-179 ykcC GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
PEBIFDJM_01551 8.4e-209 htrA 3.4.21.107 O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PEBIFDJM_01552 4.5e-133 proG 1.5.1.2 E Pyrroline-5-carboxylate reductase
PEBIFDJM_01553 1.9e-152 dppA E D-aminopeptidase
PEBIFDJM_01554 1.1e-159 dppB P COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PEBIFDJM_01555 3.3e-175 dppC EP COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components
PEBIFDJM_01556 3.9e-187 dppD P Belongs to the ABC transporter superfamily
PEBIFDJM_01557 0.0 dppE E ABC transporter substrate-binding protein
PEBIFDJM_01559 5.4e-175 ykfA 3.4.17.13 V proteins, homologs of microcin C7 resistance protein MccF
PEBIFDJM_01560 3.7e-199 ykfB 5.1.1.20 M Belongs to the mandelate racemase muconate lactonizing enzyme family
PEBIFDJM_01561 3.2e-161 ykfC 3.4.14.13 M COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
PEBIFDJM_01562 1.5e-186 ykfD E Belongs to the ABC transporter superfamily
PEBIFDJM_01563 1.5e-202 pgl 3.1.1.31 G 6-phosphogluconolactonase
PEBIFDJM_01564 1.2e-160 ykgA E Amidinotransferase
PEBIFDJM_01565 3.4e-92 ykhA 3.1.2.20 I Acyl-CoA hydrolase
PEBIFDJM_01566 2.5e-225 hmp 1.14.12.17 C Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
PEBIFDJM_01567 7.2e-09
PEBIFDJM_01568 3.5e-129 ykjA S Protein of unknown function (DUF421)
PEBIFDJM_01569 1.5e-97 ykkA S Protein of unknown function (DUF664)
PEBIFDJM_01570 1e-98 ykkB 2.3.1.128 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PEBIFDJM_01571 1.3e-54 ykkC P Multidrug resistance protein
PEBIFDJM_01572 1.6e-49 ykkD P Multidrug resistance protein
PEBIFDJM_01573 8.6e-170 purU 2.7.7.72, 3.5.1.10 F Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4)
PEBIFDJM_01574 5.2e-201 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PEBIFDJM_01575 1.2e-225 proA 1.2.1.41, 1.2.1.81 E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
PEBIFDJM_01576 4.8e-70 ohrA O Organic hydroperoxide resistance protein
PEBIFDJM_01577 3.9e-75 ohrR K COG1846 Transcriptional regulators
PEBIFDJM_01578 8.4e-72 ohrB O Organic hydroperoxide resistance protein
PEBIFDJM_01579 5.5e-83 guaD 3.5.4.12, 3.5.4.3, 3.5.4.33 FJ COG0590 Cytosine adenosine deaminases
PEBIFDJM_01580 6.5e-100 5.4.2.11 G Belongs to the phosphoglycerate mutase family
PEBIFDJM_01581 0.0 metE 2.1.1.14 E Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
PEBIFDJM_01582 5e-176 isp O Belongs to the peptidase S8 family
PEBIFDJM_01583 6.3e-151 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PEBIFDJM_01584 1.5e-135 ykoC P Cobalt transport protein
PEBIFDJM_01585 6.3e-304 P ABC transporter, ATP-binding protein
PEBIFDJM_01586 6.9e-99 ykoE S ABC-type cobalt transport system, permease component
PEBIFDJM_01587 4.3e-109 ykoF S YKOF-related Family
PEBIFDJM_01588 2.7e-123 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PEBIFDJM_01589 8.3e-241 ykoH 2.7.13.3 T Histidine kinase
PEBIFDJM_01590 8.1e-112 ykoI S Peptidase propeptide and YPEB domain
PEBIFDJM_01591 6.3e-85 ykoJ S Peptidase propeptide and YPEB domain
PEBIFDJM_01594 2.2e-222 mgtE P Acts as a magnesium transporter
PEBIFDJM_01595 1.4e-53 tnrA K transcriptional
PEBIFDJM_01596 1.3e-17
PEBIFDJM_01597 3.4e-25 ykoL
PEBIFDJM_01598 1.9e-80 mhqR K transcriptional
PEBIFDJM_01599 5.6e-219 ugtP 2.4.1.315 GT28 M COG0707 UDP-N-acetylglucosamine LPS N-acetylglucosamine transferase
PEBIFDJM_01600 3.7e-99 ykoP G polysaccharide deacetylase
PEBIFDJM_01601 6e-154 ykoQ S Calcineurin-like phosphoesterase superfamily domain
PEBIFDJM_01602 0.0 ykoS
PEBIFDJM_01603 8.2e-185 ykoT GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
PEBIFDJM_01604 0.0 ligD 6.5.1.1 L ATP-dependent DNA ligase
PEBIFDJM_01605 2.1e-160 ku L With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
PEBIFDJM_01606 0.0 ydcR 2.7.7.65 T Diguanylate cyclase
PEBIFDJM_01607 3.5e-109 ykoX S membrane-associated protein
PEBIFDJM_01608 2.1e-177 ykoY P COG0861 Membrane protein TerC, possibly involved in tellurium resistance
PEBIFDJM_01609 9.5e-130 sigI K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PEBIFDJM_01610 1.7e-114 rsgI S Anti-sigma factor N-terminus
PEBIFDJM_01611 1.9e-26 sspD S small acid-soluble spore protein
PEBIFDJM_01612 5.6e-124 ykrK S Domain of unknown function (DUF1836)
PEBIFDJM_01613 3.5e-155 htpX O Belongs to the peptidase M48B family
PEBIFDJM_01614 2.2e-233 ktrB P COG0168 Trk-type K transport systems, membrane components
PEBIFDJM_01615 1.2e-10 ydfR S Protein of unknown function (DUF421)
PEBIFDJM_01616 4.5e-22 ykzE
PEBIFDJM_01617 2.7e-188 ykrP G COG3594 Fucose 4-O-acetylase and related acetyltransferases
PEBIFDJM_01618 0.0 kinE 2.7.13.3 T Histidine kinase
PEBIFDJM_01619 5e-87 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
PEBIFDJM_01621 1.4e-195 mtnA 5.3.1.23 E Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
PEBIFDJM_01622 2.4e-228 mtnK 2.7.1.100 F Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
PEBIFDJM_01623 3.5e-151 mtnU 3.5.1.3 S Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase
PEBIFDJM_01624 3.4e-230 mtnE 2.6.1.83 E Aminotransferase
PEBIFDJM_01625 1.3e-229 mtnW 5.3.2.5 G Catalyzes the enolization of 2,3-diketo-5- methylthiopentyl-1-phosphate (DK-MTP-1-P) into 2-hydroxy-3-keto-5- methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P)
PEBIFDJM_01626 8.3e-136 mtnX 3.1.3.87, 4.2.1.109 E Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
PEBIFDJM_01627 4.7e-114 mtnB 3.1.3.87, 4.1.2.17, 4.2.1.109, 5.1.3.4 E Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P)
PEBIFDJM_01628 8.4e-96 mtnD 1.13.11.53, 1.13.11.54 S Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
PEBIFDJM_01629 2.2e-51 XK27_09985 S Protein of unknown function (DUF1232)
PEBIFDJM_01630 6.4e-09 S Spo0E like sporulation regulatory protein
PEBIFDJM_01631 4e-64 eag
PEBIFDJM_01632 2.1e-274 kinD 2.7.13.3 T COG0642 Signal transduction histidine kinase
PEBIFDJM_01633 1.3e-75 ykvE K transcriptional
PEBIFDJM_01634 2.5e-125 motB N Flagellar motor protein
PEBIFDJM_01635 1e-137 motA N flagellar motor
PEBIFDJM_01636 0.0 clpE O Belongs to the ClpA ClpB family
PEBIFDJM_01637 1.8e-179 ykvI S membrane
PEBIFDJM_01638 7.3e-126 queC 6.3.4.20 F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
PEBIFDJM_01639 2.8e-81 queD 4.1.2.50, 4.2.3.12 H synthase
PEBIFDJM_01640 6.4e-139 queE 1.97.1.4, 4.3.99.3 H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds
PEBIFDJM_01641 2e-96 queF 1.7.1.13 S Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
PEBIFDJM_01642 9.9e-61 ykvN K Transcriptional regulator
PEBIFDJM_01643 5.3e-133 IQ Enoyl-(Acyl carrier protein) reductase
PEBIFDJM_01644 2.5e-233 ykvP 3.5.1.28 M Glycosyl transferases group 1
PEBIFDJM_01645 1.2e-35 3.5.1.104 M LysM domain
PEBIFDJM_01646 2.8e-163 G Glycosyl hydrolases family 18
PEBIFDJM_01647 2.8e-45 ykvR S Protein of unknown function (DUF3219)
PEBIFDJM_01648 6e-25 ykvS S protein conserved in bacteria
PEBIFDJM_01649 2.8e-28
PEBIFDJM_01650 3.1e-102 ykvT 3.5.1.28 M Cell Wall Hydrolase
PEBIFDJM_01651 3.8e-238 ykvU S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PEBIFDJM_01652 9.2e-89 stoA CO thiol-disulfide
PEBIFDJM_01653 0.0 cadA 3.6.3.3, 3.6.3.5 P COG2217 Cation transport ATPase
PEBIFDJM_01654 1e-09
PEBIFDJM_01655 1.3e-207 pepQ 3.4.13.9 E COG0006 Xaa-Pro aminopeptidase
PEBIFDJM_01656 5.4e-178 ykvZ 5.1.1.1 K Transcriptional regulator
PEBIFDJM_01658 1.7e-127 glcT K antiterminator
PEBIFDJM_01659 0.0 ptsG 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PEBIFDJM_01660 1e-38 ptsH G phosphocarrier protein HPr
PEBIFDJM_01661 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
PEBIFDJM_01662 7.2e-39 splA S Transcriptional regulator
PEBIFDJM_01663 6.3e-201 splB 4.1.99.14 L Spore photoproduct lyase
PEBIFDJM_01664 1.9e-129 ykwB 2.3.1.1 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PEBIFDJM_01665 1.1e-262 mcpC NT chemotaxis protein
PEBIFDJM_01666 5e-159 glxR 1.1.1.31, 1.1.1.60 I COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
PEBIFDJM_01667 8e-124 ykwD J protein with SCP PR1 domains
PEBIFDJM_01668 0.0 mrdA 3.4.16.4 M Penicillin-binding Protein
PEBIFDJM_01669 0.0 pilS 2.7.13.3 T Histidine kinase
PEBIFDJM_01670 8.8e-223 patA 2.6.1.1 E Aminotransferase
PEBIFDJM_01671 4.9e-15
PEBIFDJM_01672 1.6e-168 cheV 2.7.13.3 T Chemotaxis protein CheV
PEBIFDJM_01673 1.7e-84 ykyB S YkyB-like protein
PEBIFDJM_01674 4.5e-236 ykuC EGP Major facilitator Superfamily
PEBIFDJM_01675 1.8e-87 ykuD S protein conserved in bacteria
PEBIFDJM_01676 9.4e-166 ykuE S Metallophosphoesterase
PEBIFDJM_01677 2.2e-142 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PEBIFDJM_01678 5.2e-234 ykuI T Diguanylate phosphodiesterase
PEBIFDJM_01679 3.9e-37 ykuJ S protein conserved in bacteria
PEBIFDJM_01680 4.9e-93 ykuK S Ribonuclease H-like
PEBIFDJM_01681 3.9e-27 ykzF S Antirepressor AbbA
PEBIFDJM_01682 1.6e-76 ykuL S CBS domain
PEBIFDJM_01683 3.5e-168 ccpC K Transcriptional regulator
PEBIFDJM_01684 2.4e-86 fld C Flavodoxin domain
PEBIFDJM_01685 1.8e-175 ykuO
PEBIFDJM_01686 6.2e-76 fld C Flavodoxin
PEBIFDJM_01687 1.1e-74 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
PEBIFDJM_01688 4.9e-215 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
PEBIFDJM_01689 9e-37 ykuS S Belongs to the UPF0180 family
PEBIFDJM_01690 8.8e-142 ykuT M Mechanosensitive ion channel
PEBIFDJM_01691 3.9e-101 ykuU O Alkyl hydroperoxide reductase
PEBIFDJM_01692 4.1e-80 ykuV CO thiol-disulfide
PEBIFDJM_01693 5.8e-95 rok K Repressor of ComK
PEBIFDJM_01694 3.5e-145 yknT
PEBIFDJM_01695 3.9e-110 mobA 2.7.7.77 H Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor
PEBIFDJM_01696 2.2e-190 moeB 2.7.7.73, 2.7.7.80 H COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
PEBIFDJM_01697 8.4e-243 moeA 2.10.1.1 H molybdopterin
PEBIFDJM_01698 9.9e-94 mobB 2.10.1.1, 2.7.7.77 H molybdopterin-guanine dinucleotide biosynthesis protein
PEBIFDJM_01699 3.2e-83 moaE 2.8.1.12 H COG0314 Molybdopterin converting factor, large subunit
PEBIFDJM_01700 8.3e-32 moaD 2.8.1.12 H Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
PEBIFDJM_01701 0.0 yknU V COG1132 ABC-type multidrug transport system, ATPase and permease components
PEBIFDJM_01702 0.0 yknV V COG1132 ABC-type multidrug transport system, ATPase and permease components
PEBIFDJM_01703 1.4e-114 yknW S Yip1 domain
PEBIFDJM_01704 5.6e-158 acrA M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
PEBIFDJM_01705 2.5e-124 macB V ABC transporter, ATP-binding protein
PEBIFDJM_01706 6.2e-208 yknZ V COG0577 ABC-type antimicrobial peptide transport system, permease component
PEBIFDJM_01707 3.1e-136 fruR K Transcriptional regulator
PEBIFDJM_01708 6.2e-168 fruK 2.7.1.11, 2.7.1.56 G Belongs to the carbohydrate kinase PfkB family
PEBIFDJM_01709 0.0 fruA 2.7.1.202 GT COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type)
PEBIFDJM_01710 4.8e-105 sipT 3.4.21.89 U Belongs to the peptidase S26 family
PEBIFDJM_01711 8.1e-39 ykoA
PEBIFDJM_01712 5.8e-310 ybiT S COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PEBIFDJM_01713 1.1e-167 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PEBIFDJM_01714 2e-238 ampS E COG2309 Leucyl aminopeptidase (aminopeptidase T)
PEBIFDJM_01715 1.1e-12 S Uncharacterized protein YkpC
PEBIFDJM_01716 7.7e-183 mreB D Rod-share determining protein MreBH
PEBIFDJM_01717 7.3e-43 abrB K of stationary sporulation gene expression
PEBIFDJM_01718 2.7e-241 kinC 2.7.13.3 T COG0642 Signal transduction histidine kinase
PEBIFDJM_01719 3.8e-156 ykqA P Gamma-glutamyl cyclotransferase, AIG2-like
PEBIFDJM_01720 4e-116 ktrA P COG0569 K transport systems, NAD-binding component
PEBIFDJM_01721 0.0 ade 3.5.4.2 F Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
PEBIFDJM_01722 0.0 rnjA S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PEBIFDJM_01723 8.2e-31 ykzG S Belongs to the UPF0356 family
PEBIFDJM_01724 5.5e-147 ykrA S hydrolases of the HAD superfamily
PEBIFDJM_01725 8.9e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PEBIFDJM_01727 1.3e-106 recN L Putative cell-wall binding lipoprotein
PEBIFDJM_01728 9.9e-192 pdhA 1.2.4.1, 1.2.4.4 C COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PEBIFDJM_01729 4.9e-179 pdhB 1.2.4.1 C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PEBIFDJM_01730 9.9e-231 pdhC 2.3.1.12 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PEBIFDJM_01731 2.4e-243 lpdA 1.8.1.4 C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PEBIFDJM_01732 1.3e-63 slp CO COG0526, thiol-disulfide isomerase and thioredoxins
PEBIFDJM_01733 3.5e-277 speA 4.1.1.19 E Arginine
PEBIFDJM_01734 1.7e-41 yktA S Belongs to the UPF0223 family
PEBIFDJM_01735 4.6e-117 yktB S Belongs to the UPF0637 family
PEBIFDJM_01736 7.1e-26 ykzI
PEBIFDJM_01737 4.3e-149 suhB 3.1.3.25 G Inositol monophosphatase
PEBIFDJM_01738 1.1e-75 ykzC S Acetyltransferase (GNAT) family
PEBIFDJM_01739 1e-170 Q Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
PEBIFDJM_01740 1.1e-292 mpl 3.4.24.28, 3.4.24.29 E Peptidase M4
PEBIFDJM_01741 0.0 ylaA
PEBIFDJM_01742 3e-41 ylaB
PEBIFDJM_01743 2.5e-89 ylaC K Belongs to the sigma-70 factor family. ECF subfamily
PEBIFDJM_01744 7.1e-12 sigC S Putative zinc-finger
PEBIFDJM_01745 1.2e-37 ylaE
PEBIFDJM_01746 1.1e-21 S Family of unknown function (DUF5325)
PEBIFDJM_01747 0.0 typA T GTP-binding protein TypA
PEBIFDJM_01748 4.2e-47 ylaH S YlaH-like protein
PEBIFDJM_01749 2.5e-32 ylaI S protein conserved in bacteria
PEBIFDJM_01750 1.1e-89 ylaJ S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PEBIFDJM_01751 8e-249 phoH T ATPase related to phosphate starvation-inducible protein PhoH
PEBIFDJM_01752 2.7e-85 ylaL S Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
PEBIFDJM_01753 4.7e-171 glsA 3.5.1.2 E Belongs to the glutaminase family
PEBIFDJM_01754 8.7e-44 ylaN S Belongs to the UPF0358 family
PEBIFDJM_01755 9.4e-212 ftsW D Belongs to the SEDS family
PEBIFDJM_01756 0.0 pyc 6.4.1.1 C Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
PEBIFDJM_01757 3.2e-164 ctaA 2.5.1.141 O Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group
PEBIFDJM_01758 3.2e-164 ctaB 2.5.1.141 O Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group
PEBIFDJM_01759 6.8e-190 ctaC 1.9.3.1 C Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B)
PEBIFDJM_01760 0.0 ctaD 1.10.3.12, 1.9.3.1 C Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
PEBIFDJM_01761 3.3e-112 cyoC 1.10.3.12, 1.9.3.1 C COG1845 Heme copper-type cytochrome quinol oxidase, subunit 3
PEBIFDJM_01762 4.2e-53 ctaF 1.10.3.12, 1.9.3.1 C COG3125 Heme copper-type cytochrome quinol oxidase, subunit 4
PEBIFDJM_01763 2.8e-165 ctaG S cytochrome c oxidase
PEBIFDJM_01764 7e-62 ylbA S YugN-like family
PEBIFDJM_01765 2.6e-74 ylbB T COG0517 FOG CBS domain
PEBIFDJM_01766 9.6e-200 ylbC S protein with SCP PR1 domains
PEBIFDJM_01767 5.9e-62 ylbD S Putative coat protein
PEBIFDJM_01768 6.7e-37 ylbE S YlbE-like protein
PEBIFDJM_01769 1.8e-75 ylbF S Belongs to the UPF0342 family
PEBIFDJM_01770 3.7e-38 ylbG S UPF0298 protein
PEBIFDJM_01771 7.8e-97 rsmD 2.1.1.171 L Methyltransferase
PEBIFDJM_01772 3.9e-84 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
PEBIFDJM_01773 1.1e-220 ylbJ S Sporulation integral membrane protein YlbJ
PEBIFDJM_01774 1.3e-137 ylbK S esterase of the alpha-beta hydrolase superfamily
PEBIFDJM_01775 2.2e-185 ylbL T Belongs to the peptidase S16 family
PEBIFDJM_01776 4.3e-228 ylbM S Belongs to the UPF0348 family
PEBIFDJM_01778 3e-90 yceD S metal-binding, possibly nucleic acid-binding protein
PEBIFDJM_01779 1.2e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
PEBIFDJM_01780 3.4e-74 ylbO S SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
PEBIFDJM_01781 4e-89 ylbP K n-acetyltransferase
PEBIFDJM_01782 6.8e-167 panE 1.1.1.169 H Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
PEBIFDJM_01783 2.7e-307 bshC S Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
PEBIFDJM_01784 2.9e-78 mraZ K Belongs to the MraZ family
PEBIFDJM_01785 1.6e-171 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
PEBIFDJM_01786 3.7e-44 ftsL D Essential cell division protein
PEBIFDJM_01787 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
PEBIFDJM_01788 0.0 ftsI 3.4.16.4 M stage V sporulation protein D
PEBIFDJM_01789 5.2e-281 murE 6.3.2.10, 6.3.2.13 M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
PEBIFDJM_01790 3.2e-170 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
PEBIFDJM_01791 1.4e-253 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
PEBIFDJM_01792 5.7e-186 spoVE D Belongs to the SEDS family
PEBIFDJM_01793 1.1e-200 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
PEBIFDJM_01794 5.3e-167 murB 1.3.1.98 M cell wall formation
PEBIFDJM_01795 1e-137 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
PEBIFDJM_01796 4.1e-103 ylxW S protein conserved in bacteria
PEBIFDJM_01797 1.8e-91 ylxX S protein conserved in bacteria
PEBIFDJM_01798 6.2e-58 sbp S small basic protein
PEBIFDJM_01799 7e-229 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
PEBIFDJM_01800 2e-203 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
PEBIFDJM_01801 0.0 bpr O COG1404 Subtilisin-like serine proteases
PEBIFDJM_01803 6.8e-170 spoIIGA M aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR
PEBIFDJM_01804 1.4e-125 sigE K sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PEBIFDJM_01805 3.6e-140 sigG K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PEBIFDJM_01806 3.1e-147 modF 3.6.3.21, 3.6.3.34 P COG1119 ABC-type molybdenum transport system, ATPase component photorepair protein PhrA
PEBIFDJM_01807 2.6e-252 argE 3.5.1.16 E Acetylornithine deacetylase
PEBIFDJM_01808 2.4e-37 ylmC S sporulation protein
PEBIFDJM_01809 8.6e-156 yfiH S Belongs to the multicopper oxidase YfiH RL5 family
PEBIFDJM_01810 2.9e-125 ylmE S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
PEBIFDJM_01811 1.5e-61 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
PEBIFDJM_01812 1.3e-39 yggT S membrane
PEBIFDJM_01813 2e-138 ylmH 5.4.99.23, 5.4.99.24 S conserved protein, contains S4-like domain
PEBIFDJM_01814 2.6e-67 divIVA D Cell division initiation protein
PEBIFDJM_01815 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
PEBIFDJM_01816 1.3e-63 dksA T COG1734 DnaK suppressor protein
PEBIFDJM_01817 1.8e-78 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
PEBIFDJM_01818 1.2e-163 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
PEBIFDJM_01819 2.7e-94 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
PEBIFDJM_01820 5.4e-229 pyrP F Xanthine uracil
PEBIFDJM_01821 3.4e-166 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
PEBIFDJM_01822 4.1e-250 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
PEBIFDJM_01823 5e-212 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
PEBIFDJM_01824 0.0 carB 6.3.5.5 F Belongs to the CarB family
PEBIFDJM_01825 1.4e-144 pyrK C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( )
PEBIFDJM_01826 6.6e-173 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
PEBIFDJM_01827 2.3e-125 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
PEBIFDJM_01828 8e-114 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
PEBIFDJM_01829 2.2e-141 cysH 1.8.4.10, 1.8.4.8, 2.7.1.25 EH Belongs to the PAPS reductase family. CysH subfamily
PEBIFDJM_01830 1.8e-179 cysP P phosphate transporter
PEBIFDJM_01831 5e-223 sat 2.7.7.4 P Belongs to the sulfate adenylyltransferase family
PEBIFDJM_01832 7.3e-109 cysC 2.7.1.25 P Catalyzes the synthesis of activated sulfate
PEBIFDJM_01833 2e-143 hemD 2.1.1.107, 4.2.1.75 H Belongs to the precorrin methyltransferase family
PEBIFDJM_01834 1.3e-145 cbiX 4.99.1.3, 4.99.1.4, 5.4.99.60, 5.4.99.61 S Sirohydrochlorin ferrochelatase
PEBIFDJM_01835 1.6e-82 cysG 1.3.1.76, 4.99.1.4 H Siroheme synthase
PEBIFDJM_01836 0.0 FbpA K RNA-binding protein homologous to eukaryotic snRNP
PEBIFDJM_01837 0.0 yloB 3.6.3.8 P COG0474 Cation transport ATPase
PEBIFDJM_01838 2.4e-156 yloC S stress-induced protein
PEBIFDJM_01839 1.5e-40 ylzA S Belongs to the UPF0296 family
PEBIFDJM_01840 3.1e-110 gmk 2.7.4.8 F Essential for recycling GMP and indirectly, cGMP
PEBIFDJM_01841 2.2e-28 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
PEBIFDJM_01842 8.2e-224 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
PEBIFDJM_01843 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PEBIFDJM_01844 6.6e-84 def 2.1.2.9, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
PEBIFDJM_01845 5.2e-173 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
PEBIFDJM_01846 3.2e-253 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
PEBIFDJM_01847 5.3e-206 rlmN 2.1.1.192 J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs
PEBIFDJM_01848 1.8e-139 stp 3.1.3.16 T phosphatase
PEBIFDJM_01849 0.0 prkC 2.7.11.1 KLT serine threonine protein kinase
PEBIFDJM_01850 8.6e-170 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
PEBIFDJM_01851 4.2e-118 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
PEBIFDJM_01852 6.9e-121 thiN 2.7.6.2 H thiamine pyrophosphokinase
PEBIFDJM_01853 4.2e-26 rpmB J Belongs to the bacterial ribosomal protein bL28 family
PEBIFDJM_01854 5.5e-59 asp S protein conserved in bacteria
PEBIFDJM_01855 1.4e-298 yloV S kinase related to dihydroxyacetone kinase
PEBIFDJM_01856 1.9e-118 sdaAB 4.3.1.17 E L-serine dehydratase
PEBIFDJM_01857 9.3e-156 sdaAA 4.3.1.17 E L-serine dehydratase
PEBIFDJM_01858 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
PEBIFDJM_01859 4e-80 fapR 5.3.1.23 K Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism
PEBIFDJM_01860 9.5e-178 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
PEBIFDJM_01861 3.5e-169 fabD 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
PEBIFDJM_01862 6.1e-129 IQ reductase
PEBIFDJM_01863 2.8e-32 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
PEBIFDJM_01864 1.2e-135 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
PEBIFDJM_01865 0.0 smc D Required for chromosome condensation and partitioning
PEBIFDJM_01866 8.8e-176 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
PEBIFDJM_01867 1.1e-86
PEBIFDJM_01868 1.6e-49 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
PEBIFDJM_01869 3e-235 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
PEBIFDJM_01870 1.1e-43 rpsP J Belongs to the bacterial ribosomal protein bS16 family
PEBIFDJM_01871 4.5e-36 ylqC S Belongs to the UPF0109 family
PEBIFDJM_01872 1.4e-60 ylqD S YlqD protein
PEBIFDJM_01873 5.3e-95 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
PEBIFDJM_01874 9.2e-138 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
PEBIFDJM_01875 1.4e-56 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
PEBIFDJM_01876 4.6e-157 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
PEBIFDJM_01877 6.9e-136 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
PEBIFDJM_01878 3.7e-286 ylqG
PEBIFDJM_01879 3e-44 ylqH S homolog of the cytoplasmic domain of flagellar protein FhlB
PEBIFDJM_01880 3.4e-211 sucC 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit
PEBIFDJM_01881 1.1e-167 sucD 6.2.1.5 C Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
PEBIFDJM_01882 5e-170 dprA LU Rossmann fold nucleotide-binding protein involved in DNA uptake
PEBIFDJM_01883 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PEBIFDJM_01884 7.4e-247 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
PEBIFDJM_01885 2.5e-169 xerC L tyrosine recombinase XerC
PEBIFDJM_01886 1.3e-91 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
PEBIFDJM_01887 1.5e-250 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
PEBIFDJM_01888 9.2e-136 codY K DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
PEBIFDJM_01889 2.3e-63 flgB N Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body
PEBIFDJM_01890 6.9e-75 flgC N Belongs to the flagella basal body rod proteins family
PEBIFDJM_01891 1.9e-31 fliE N Flagellar hook-basal body
PEBIFDJM_01892 2.4e-255 fliF N The M ring may be actively involved in energy transduction
PEBIFDJM_01893 2e-178 fliG N One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
PEBIFDJM_01894 2.5e-106 fliH NU COG1317 Flagellar biosynthesis type III secretory pathway protein
PEBIFDJM_01895 2.1e-241 fliI 3.6.3.14 NU COG1157 Flagellar biosynthesis type III secretory pathway ATPase
PEBIFDJM_01896 1.5e-69 fliJ N Flagellar biosynthesis chaperone
PEBIFDJM_01897 1.3e-36 ylxF S MgtE intracellular N domain
PEBIFDJM_01898 4.3e-219 fliK N Flagellar hook-length control protein
PEBIFDJM_01899 1.7e-72 flgD N Flagellar basal body rod modification protein
PEBIFDJM_01900 8.2e-140 flgG N Flagellar basal body rod
PEBIFDJM_01901 4.6e-49 fliL N Controls the rotational direction of flagella during chemotaxis
PEBIFDJM_01902 1.9e-181 fliM N One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation
PEBIFDJM_01903 5.5e-174 fliN N FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
PEBIFDJM_01904 6.1e-58 cheB 3.1.1.61, 3.5.1.44 T response regulator
PEBIFDJM_01905 4.6e-96 fliZ N Flagellar biosynthesis protein, FliO
PEBIFDJM_01906 1.6e-109 fliP N Plays a role in the flagellum-specific transport system
PEBIFDJM_01907 2.2e-36 fliQ N Role in flagellar biosynthesis
PEBIFDJM_01908 3.6e-132 fliR N Flagellar biosynthetic protein FliR
PEBIFDJM_01909 1.4e-190 flhB N Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PEBIFDJM_01910 0.0 flhA N Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
PEBIFDJM_01911 5.2e-201 flhF N Flagellar biosynthesis regulator FlhF
PEBIFDJM_01912 1.7e-157 flhG D Belongs to the ParA family
PEBIFDJM_01913 1.7e-196 cheB 3.1.1.61, 3.5.1.44 NT catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
PEBIFDJM_01914 0.0 cheA 2.7.13.3 NT COG0643 Chemotaxis protein histidine kinase and related kinases
PEBIFDJM_01915 2.8e-79 cheW NT COG0835 Chemotaxis signal transduction protein
PEBIFDJM_01916 1.3e-111 cheC NT COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation
PEBIFDJM_01917 4.3e-86 cheD 3.5.1.44 NT Deamidates glutamine residues to glutamate on methyl- accepting chemotaxis receptors (MCPs). CheD-mediated MCP deamidation is required for productive communication of the conformational signals of the chemoreceptors to the CheA kinase
PEBIFDJM_01918 5.6e-138 sigD K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PEBIFDJM_01919 5.3e-76 ylxL
PEBIFDJM_01920 1e-131 rpsB J Belongs to the universal ribosomal protein uS2 family
PEBIFDJM_01921 6.3e-157 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
PEBIFDJM_01922 2.7e-126 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
PEBIFDJM_01923 6.4e-91 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
PEBIFDJM_01924 8.3e-145 uppS 2.5.1.31 I Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
PEBIFDJM_01925 1.2e-138 cdsA 2.7.7.41 S Belongs to the CDS family
PEBIFDJM_01926 4.6e-216 dxr 1.1.1.267 I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP)
PEBIFDJM_01927 7.7e-233 rasP M zinc metalloprotease
PEBIFDJM_01928 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
PEBIFDJM_01929 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PEBIFDJM_01930 3.3e-80 rimP S Required for maturation of 30S ribosomal subunits
PEBIFDJM_01931 1.1e-203 nusA K Participates in both transcription termination and antitermination
PEBIFDJM_01932 3.4e-32 ylxR K nucleic-acid-binding protein implicated in transcription termination
PEBIFDJM_01933 3.1e-47 ylxQ J ribosomal protein
PEBIFDJM_01934 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
PEBIFDJM_01935 3.9e-44 ylxP S protein conserved in bacteria
PEBIFDJM_01936 5e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
PEBIFDJM_01937 1.2e-169 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
PEBIFDJM_01938 6.7e-181 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
PEBIFDJM_01939 6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
PEBIFDJM_01940 0.0 pnp 2.7.7.8 J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
PEBIFDJM_01941 4e-181 ylxY 3.5.1.104 G Sporulation protein, polysaccharide deacetylase
PEBIFDJM_01942 4.4e-233 pepR S Belongs to the peptidase M16 family
PEBIFDJM_01943 2.6e-42 ymxH S YlmC YmxH family
PEBIFDJM_01944 2.9e-162 spoVFA 1.1.1.29, 1.1.1.399, 1.1.1.95 CH Dipicolinate synthase subunit A
PEBIFDJM_01945 4.3e-109 spoVFB H Together with DpaA, catalyzes the conversion of dihydrodipicolinate to dipicolinate (DPA)
PEBIFDJM_01946 1.4e-192 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
PEBIFDJM_01947 5.9e-222 dapG 1.1.1.3, 2.7.2.4 E Belongs to the aspartokinase family
PEBIFDJM_01948 4e-156 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
PEBIFDJM_01949 1.9e-308 rnjB S An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
PEBIFDJM_01950 5.3e-133 tepA 3.4.21.92 OU COG0740 Protease subunit of ATP-dependent Clp proteases
PEBIFDJM_01951 2.9e-31 S YlzJ-like protein
PEBIFDJM_01952 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
PEBIFDJM_01953 1.4e-133 ymfC K Transcriptional regulator
PEBIFDJM_01954 3.8e-205 ymfD EGP Major facilitator Superfamily
PEBIFDJM_01955 1.3e-232 ymfF S Peptidase M16
PEBIFDJM_01956 2.3e-240 ymfH S zinc protease
PEBIFDJM_01957 2.7e-129 ymfI 1.1.1.100, 1.3.1.28 S Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
PEBIFDJM_01958 4.8e-41 ymfJ S Protein of unknown function (DUF3243)
PEBIFDJM_01959 2.7e-143 ymfK S Protein of unknown function (DUF3388)
PEBIFDJM_01960 1.8e-122 ymfM S protein conserved in bacteria
PEBIFDJM_01961 2.5e-101 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PEBIFDJM_01962 1.9e-236 cinA 3.5.1.42 S Belongs to the CinA family
PEBIFDJM_01963 8.1e-188 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
PEBIFDJM_01964 2e-211 pbpX V Beta-lactamase
PEBIFDJM_01965 2.1e-224 rny S Endoribonuclease that initiates mRNA decay
PEBIFDJM_01966 7.1e-152 ymdB S protein conserved in bacteria
PEBIFDJM_01967 1.2e-36 spoVS S Stage V sporulation protein S
PEBIFDJM_01968 3.6e-196 tdh 1.1.1.103 C Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate
PEBIFDJM_01969 7.2e-217 kbl 2.3.1.29, 2.3.1.47 H Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide
PEBIFDJM_01970 1.7e-295 miaB 2.8.4.3 J Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
PEBIFDJM_01971 9.2e-69 ymcA 3.6.3.21 S Belongs to the UPF0342 family
PEBIFDJM_01972 2.2e-88 cotE S Spore coat protein
PEBIFDJM_01973 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
PEBIFDJM_01974 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
PEBIFDJM_01975 5.1e-70 S Regulatory protein YrvL
PEBIFDJM_01977 1.2e-97 ymcC S Membrane
PEBIFDJM_01978 2.9e-108 pksA K Transcriptional regulator
PEBIFDJM_01979 3.7e-125 pksB 3.1.2.6 S Polyketide biosynthesis
PEBIFDJM_01980 2.2e-162 fabD 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
PEBIFDJM_01982 6e-185 pksD Q Acyl transferase domain
PEBIFDJM_01983 0.0 fabD 1.13.12.16, 2.3.1.39 I malonyl CoA-acyl carrier protein transacylase
PEBIFDJM_01984 1.4e-37 acpK IQ Phosphopantetheine attachment site
PEBIFDJM_01985 8.7e-237 pksF 2.3.1.179, 2.3.1.41 I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP
PEBIFDJM_01986 1.5e-244 pksG 2.3.3.10 I synthase
PEBIFDJM_01987 1.3e-142 pksH 4.2.1.18 I enoyl-CoA hydratase
PEBIFDJM_01988 1e-136 pksI I Belongs to the enoyl-CoA hydratase isomerase family
PEBIFDJM_01989 0.0 rhiB IQ polyketide synthase
PEBIFDJM_01990 0.0 pfaA Q Polyketide synthase of type I
PEBIFDJM_01991 0.0 pfaA 4.1.1.35 GT4 IQ polyketide synthase
PEBIFDJM_01992 0.0 dhbF IQ polyketide synthase
PEBIFDJM_01993 0.0 pks13 HQ Beta-ketoacyl synthase
PEBIFDJM_01994 2.2e-232 cypA C Cytochrome P450
PEBIFDJM_01995 4.4e-61 ymzB
PEBIFDJM_01996 2.3e-161 ymaE S Metallo-beta-lactamase superfamily
PEBIFDJM_01997 1.2e-249 aprX O Belongs to the peptidase S8 family
PEBIFDJM_01998 1.9e-07 K Transcriptional regulator
PEBIFDJM_01999 2.1e-126 ymaC S Replication protein
PEBIFDJM_02000 1.6e-79 ymaD O redox protein, regulator of disulfide bond formation
PEBIFDJM_02001 8.9e-54 ebrB P COG2076 Membrane transporters of cations and cationic drugs
PEBIFDJM_02002 5.4e-50 ebrA P Small Multidrug Resistance protein
PEBIFDJM_02004 2.1e-46 ymaF S YmaF family
PEBIFDJM_02005 4.6e-174 miaA 2.5.1.75 J Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
PEBIFDJM_02006 1.9e-33 hfq J RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs
PEBIFDJM_02007 3.7e-23
PEBIFDJM_02008 4.5e-22 ymzA
PEBIFDJM_02009 9.6e-49 nrdI 1.17.4.1 F Probably involved in ribonucleotide reductase function
PEBIFDJM_02010 0.0 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PEBIFDJM_02011 4.5e-188 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PEBIFDJM_02012 2e-109 ymaB
PEBIFDJM_02013 1.8e-112 cwlC 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
PEBIFDJM_02014 1.7e-176 spoVK O stage V sporulation protein K
PEBIFDJM_02015 3.6e-230 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
PEBIFDJM_02016 1.7e-243 ynbB 4.4.1.1 P COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance
PEBIFDJM_02017 4.3e-68 glnR K transcriptional
PEBIFDJM_02018 7e-261 glnA 6.3.1.2 E glutamine synthetase
PEBIFDJM_02021 1.7e-39
PEBIFDJM_02022 1.8e-42 A Pre-toxin TG
PEBIFDJM_02023 3e-11 A Pre-toxin TG
PEBIFDJM_02024 6.4e-09 ywqJ S LXG domain of WXG superfamily
PEBIFDJM_02025 3e-18 A Pre-toxin TG
PEBIFDJM_02026 4.7e-87 A Pre-toxin TG
PEBIFDJM_02027 2.7e-127 S Protein of unknown function (DUF1524)
PEBIFDJM_02028 6.5e-10
PEBIFDJM_02029 3.9e-31
PEBIFDJM_02030 2.7e-71 Q Collagen triple helix repeat (20 copies)
PEBIFDJM_02031 3.8e-51 mdxE G COG2182 Maltose-binding periplasmic proteins domains
PEBIFDJM_02032 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Alpha amylase, N-terminal ig-like domain
PEBIFDJM_02033 1.5e-172 yvdE K Transcriptional regulator
PEBIFDJM_02034 9.6e-106 yvdD 3.2.2.10 S Belongs to the LOG family
PEBIFDJM_02035 1.5e-52 yvdC S MazG nucleotide pyrophosphohydrolase domain
PEBIFDJM_02036 6.2e-288 sulP P COG0659 Sulfate permease and related transporters (MFS superfamily)
PEBIFDJM_02037 2.2e-105 ytiB 4.2.1.1 P Reversible hydration of carbon dioxide
PEBIFDJM_02038 4.3e-183 ghrB 1.1.1.215, 1.1.1.26, 1.1.1.43, 1.1.1.79, 1.1.1.81 CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PEBIFDJM_02039 0.0 yxdM V ABC transporter (permease)
PEBIFDJM_02040 5.6e-141 yvcR V ABC transporter, ATP-binding protein
PEBIFDJM_02041 1.3e-196 yvcQ 2.7.13.3 T His Kinase A (phosphoacceptor) domain
PEBIFDJM_02042 1.5e-132 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PEBIFDJM_02043 3.3e-32
PEBIFDJM_02044 3.2e-141 nhoA 2.3.1.118 Q Belongs to the arylamine N-acetyltransferase family
PEBIFDJM_02045 1.6e-36 crh G Phosphocarrier protein Chr
PEBIFDJM_02046 1.4e-170 whiA K May be required for sporulation
PEBIFDJM_02047 2.8e-177 ybhK S Required for morphogenesis under gluconeogenic growth conditions
PEBIFDJM_02048 5.7e-166 rapZ S Displays ATPase and GTPase activities
PEBIFDJM_02049 3.9e-89 yvcI 3.6.1.55 F COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
PEBIFDJM_02050 2.5e-175 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
PEBIFDJM_02051 1.1e-97 usp CBM50 M protein conserved in bacteria
PEBIFDJM_02052 4.5e-277 S COG0457 FOG TPR repeat
PEBIFDJM_02053 0.0 msbA2 3.6.3.44 V ABC transporter
PEBIFDJM_02055 0.0
PEBIFDJM_02056 1.1e-74
PEBIFDJM_02057 2.9e-51
PEBIFDJM_02058 2e-112 hisE 3.5.4.19, 3.6.1.31, 5.3.1.16 E belongs to the PRA-CH family
PEBIFDJM_02059 1.8e-136 hisF E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
PEBIFDJM_02060 1.1e-130 hisA 5.3.1.16 E 1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
PEBIFDJM_02061 6.2e-114 hisH E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
PEBIFDJM_02062 4.7e-108 hisB 1.1.1.23, 2.6.1.9, 3.1.3.15, 4.2.1.19 E imidazoleglycerol-phosphate dehydratase
PEBIFDJM_02063 3.8e-227 hisD 1.1.1.23, 1.1.1.308 E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
PEBIFDJM_02064 7.4e-115 hisG 2.4.2.17 E Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity
PEBIFDJM_02065 2.4e-220 hisZ 2.4.2.17, 6.1.1.21 E Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
PEBIFDJM_02066 3.8e-139 yvpB NU protein conserved in bacteria
PEBIFDJM_02067 5.1e-119 hrpW 4.2.2.10, 4.2.2.2 G Pectate lyase
PEBIFDJM_02068 8.7e-82 yvoF S COG0110 Acetyltransferase (isoleucine patch superfamily)
PEBIFDJM_02069 3.2e-118 ppaX 3.1.3.18, 3.6.1.1 S Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK P. Might play a role in controlling the intracellular pyrophosphate pool
PEBIFDJM_02070 5.3e-162 yvoD P COG0370 Fe2 transport system protein B
PEBIFDJM_02071 3.2e-147 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
PEBIFDJM_02072 2.9e-168 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Also phosphorylates dephosphorylates the HPr-like catabolite repression protein crh on a specific serine residue. Therefore, by controlling the phosphorylation state of HPr and crh, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
PEBIFDJM_02073 1.7e-218 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
PEBIFDJM_02074 7e-130 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PEBIFDJM_02075 3.6e-134 yvoA K transcriptional
PEBIFDJM_02076 0.0 yvnB 3.1.4.53 Q Calcineurin-like phosphoesterase
PEBIFDJM_02077 1.2e-50 yvlD S Membrane
PEBIFDJM_02078 2.6e-26 pspB KT PspC domain
PEBIFDJM_02079 2.4e-166 yvlB S Putative adhesin
PEBIFDJM_02080 1.8e-48 yvlA
PEBIFDJM_02081 5.7e-33 yvkN
PEBIFDJM_02082 8e-123 fliC N Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
PEBIFDJM_02083 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
PEBIFDJM_02084 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
PEBIFDJM_02085 1.2e-30 csbA S protein conserved in bacteria
PEBIFDJM_02086 0.0 yvkC 2.7.9.2 GT Phosphotransferase
PEBIFDJM_02087 2.9e-99 yvkB K Transcriptional regulator
PEBIFDJM_02088 9.6e-226 yvkA EGP Major facilitator Superfamily
PEBIFDJM_02089 5.4e-220 minJ O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PEBIFDJM_02090 5.3e-56 swrA S Swarming motility protein
PEBIFDJM_02091 4.5e-269 ctpB 3.4.21.102 M Belongs to the peptidase S41A family
PEBIFDJM_02092 2.1e-155 ftsX D Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation
PEBIFDJM_02093 2.7e-123 ftsE D cell division ATP-binding protein FtsE
PEBIFDJM_02094 5.3e-56 cccB C COG2010 Cytochrome c, mono- and diheme variants
PEBIFDJM_02095 5.5e-142 yvjA S Uncharacterized protein conserved in bacteria (DUF2179)
PEBIFDJM_02096 6.1e-185 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
PEBIFDJM_02097 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
PEBIFDJM_02098 2.2e-102 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
PEBIFDJM_02099 2.8e-66
PEBIFDJM_02100 2.5e-08 fliT S bacterial-type flagellum organization
PEBIFDJM_02101 6.5e-69 fliS N flagellar protein FliS
PEBIFDJM_02102 3.4e-256 fliD N morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
PEBIFDJM_02103 4.4e-55 flaG N flagellar protein FlaG
PEBIFDJM_02104 1.5e-124 fliC N Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
PEBIFDJM_02105 9.7e-30 csrA T Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
PEBIFDJM_02106 2.7e-73 fliW S Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
PEBIFDJM_02107 1.3e-49 yviE
PEBIFDJM_02108 7.8e-155 flgL N Belongs to the bacterial flagellin family
PEBIFDJM_02109 1.2e-264 flgK N flagellar hook-associated protein
PEBIFDJM_02110 1e-76 flgN NOU FlgN protein
PEBIFDJM_02111 2.3e-38 flgM KNU Negative regulator of flagellin synthesis
PEBIFDJM_02112 7e-74 yvyF S flagellar protein
PEBIFDJM_02113 6.8e-125 comFC S Phosphoribosyl transferase domain
PEBIFDJM_02114 3.7e-45 comFB S Late competence development protein ComFB
PEBIFDJM_02115 2.4e-267 comFA L COG4098 Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
PEBIFDJM_02116 1.4e-153 degV S protein conserved in bacteria
PEBIFDJM_02117 2e-126 degU KT COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PEBIFDJM_02118 5.1e-183 degS 2.7.13.3 T Member of the two-component regulatory system DegS DegU, which plays an important role in the transition growth phase
PEBIFDJM_02119 4.9e-106 yvyE 3.4.13.9 S Domain of unknown function (DUF1949)
PEBIFDJM_02120 1.3e-113 yvhJ K Transcriptional regulator
PEBIFDJM_02124 5.9e-42 S Psort location CytoplasmicMembrane, score
PEBIFDJM_02126 1e-28 S CytoplasmicMembrane, score 9.99
PEBIFDJM_02127 6.7e-79 V ABC transporter, ATP-binding protein
PEBIFDJM_02128 1e-13
PEBIFDJM_02129 3.4e-181 tagO 2.7.8.33, 2.7.8.35 M COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase UDP-N-acetylglucosamine-1-phosphate transferase
PEBIFDJM_02130 3e-234 tuaH M Teichuronic acid biosynthesis glycosyltransferase tuaH
PEBIFDJM_02131 4.4e-135 tuaG GT2 M Glycosyltransferase like family 2
PEBIFDJM_02132 3.5e-107 tuaF M protein involved in exopolysaccharide biosynthesis
PEBIFDJM_02133 1.9e-243 tuaE M Teichuronic acid biosynthesis protein
PEBIFDJM_02135 8.4e-238 tuaD 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PEBIFDJM_02136 4.2e-201 tuaC 2.4.1.21, 3.2.1.1 GH13,GT4,GT5 GM Teichuronic acid
PEBIFDJM_02137 2.5e-232 wzxC S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PEBIFDJM_02138 4.7e-117 tuaA M COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PEBIFDJM_02139 2.3e-260 lytC 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
PEBIFDJM_02140 0.0 lytB 3.5.1.28 D Stage II sporulation protein
PEBIFDJM_02141 2.9e-11
PEBIFDJM_02142 3.8e-08 lytR K May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG)
PEBIFDJM_02143 2.1e-36 lytR K May catalyze the final step in cell wall teichoic acid biosynthesis, the transfer of the anionic cell wall polymers (APs) from their lipid-linked precursor to the cell wall peptidoglycan (PG)
PEBIFDJM_02144 6.5e-207 mnaA 5.1.3.14 M Belongs to the UDP-N-acetylglucosamine 2-epimerase family
PEBIFDJM_02145 2.1e-160 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PEBIFDJM_02146 1e-09 L COG2963 Transposase and inactivated derivatives
PEBIFDJM_02147 1.1e-159 tagH 3.6.3.38, 3.6.3.40 GM Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
PEBIFDJM_02148 4.8e-135 tagG GM Transport permease protein
PEBIFDJM_02149 5.3e-19 M transferase activity, transferring glycosyl groups
PEBIFDJM_02151 1.3e-282 tagF2 2.7.8.12 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
PEBIFDJM_02152 0.0 tagF 2.7.8.12 M glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
PEBIFDJM_02153 4.9e-69 tagD 2.7.7.15, 2.7.7.39 IM Cytidylyltransferase
PEBIFDJM_02154 1.2e-140 tagA 2.4.1.187 GT26 M Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
PEBIFDJM_02155 1.1e-190 tagB 2.7.8.14, 2.7.8.44, 2.7.8.47 M glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
PEBIFDJM_02156 1.6e-216 atl 3.2.1.96, 3.5.1.28 GH73 G Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PEBIFDJM_02157 4.6e-190 pmi 5.3.1.8 G mannose-6-phosphate isomerase
PEBIFDJM_02158 3.9e-265 gerBA EG Spore germination protein
PEBIFDJM_02159 5.4e-198 gerBB E Spore germination protein
PEBIFDJM_02160 1.3e-210 gerAC S Spore germination protein
PEBIFDJM_02161 2.7e-247 ywtG EGP Major facilitator Superfamily
PEBIFDJM_02162 5e-139 ywtF K Transcriptional regulator
PEBIFDJM_02163 7e-161 ywtE 3.1.3.104 S hydrolases of the HAD superfamily
PEBIFDJM_02164 2.9e-238 pgdS CBM50 M COG0791 Cell wall-associated hydrolases (invasion-associated proteins)
PEBIFDJM_02165 1.4e-20 ywtC
PEBIFDJM_02166 1.7e-218 capA M enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
PEBIFDJM_02167 8.6e-70 pgsC S biosynthesis protein
PEBIFDJM_02168 6.1e-224 murD 6.3.2.9 M COG0769 UDP-N-acetylmuramyl tripeptide synthase
PEBIFDJM_02169 2.7e-177 rbsR K transcriptional
PEBIFDJM_02170 6.5e-162 rbsK 2.7.1.15, 2.7.1.4 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
PEBIFDJM_02171 2.8e-64 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
PEBIFDJM_02172 2.3e-276 rbsA 3.6.3.17 G Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system
PEBIFDJM_02173 2.1e-153 rbsC G Belongs to the binding-protein-dependent transport system permease family
PEBIFDJM_02174 4.4e-161 rbsB G COG1879 ABC-type sugar transport system, periplasmic component
PEBIFDJM_02175 5.2e-90 batE T Sh3 type 3 domain protein
PEBIFDJM_02176 8e-48 ywsA S Protein of unknown function (DUF3892)
PEBIFDJM_02177 1.4e-95 ywrO S NADPH-quinone reductase (modulator of drug activity B)
PEBIFDJM_02178 1.3e-145 budA 4.1.1.5 H Alpha-acetolactate decarboxylase
PEBIFDJM_02179 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
PEBIFDJM_02180 1.1e-169 alsR K LysR substrate binding domain
PEBIFDJM_02181 3.9e-218 ywrK P Involved in arsenical resistance. Thought to form the channel of an arsenite pump
PEBIFDJM_02182 3.1e-124 ywrJ
PEBIFDJM_02183 8.2e-131 cotB
PEBIFDJM_02184 3.5e-210 cotH M Spore Coat
PEBIFDJM_02185 3.7e-12
PEBIFDJM_02186 8.1e-111 ywrF S COG1853 Conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
PEBIFDJM_02187 5e-54 S Domain of unknown function (DUF4181)
PEBIFDJM_02188 3.9e-303 ggt 2.3.2.2, 3.4.19.13 E gamma-glutamyltransferase
PEBIFDJM_02189 8e-82 ywrC K Transcriptional regulator
PEBIFDJM_02190 3.5e-103 ywrB P Chromate transporter
PEBIFDJM_02191 9.3e-87 ywrA P COG2059 Chromate transport protein ChrA
PEBIFDJM_02193 1.3e-99 ywqN S NAD(P)H-dependent
PEBIFDJM_02194 1.9e-161 K Transcriptional regulator
PEBIFDJM_02195 2.6e-121 nfi 3.1.21.7 L DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA
PEBIFDJM_02196 3.7e-98
PEBIFDJM_02198 7.4e-51
PEBIFDJM_02199 1.4e-75
PEBIFDJM_02200 1.3e-78 ywqJ S Pre-toxin TG
PEBIFDJM_02201 5.2e-17
PEBIFDJM_02202 7.9e-43
PEBIFDJM_02203 1.7e-212 ywqJ S Pre-toxin TG
PEBIFDJM_02204 3.9e-38 ywqI S Family of unknown function (DUF5344)
PEBIFDJM_02205 9.7e-23 S Domain of unknown function (DUF5082)
PEBIFDJM_02206 8.4e-131 ywqG S Domain of unknown function (DUF1963)
PEBIFDJM_02207 3.7e-246 ugd 1.1.1.22 M Belongs to the UDP-glucose GDP-mannose dehydrogenase family
PEBIFDJM_02208 6.7e-139 ywqE 3.1.3.48 GM COG4464 Capsular polysaccharide biosynthesis protein
PEBIFDJM_02209 2.2e-117 ywqD 2.7.10.1 D COG0489 ATPases involved in chromosome partitioning
PEBIFDJM_02210 2e-116 ywqC M biosynthesis protein
PEBIFDJM_02211 1.2e-17
PEBIFDJM_02212 1e-306 ywqB S SWIM zinc finger
PEBIFDJM_02213 0.0 ywqA L COG0553 Superfamily II DNA RNA helicases, SNF2 family
PEBIFDJM_02214 7.4e-155 ywpJ 3.1.3.104 S hydrolases of the HAD superfamily
PEBIFDJM_02215 8.8e-139 glcR K COG1349 Transcriptional regulators of sugar metabolism
PEBIFDJM_02216 1.4e-56 ssbB L Single-stranded DNA-binding protein
PEBIFDJM_02217 1.9e-65 ywpG
PEBIFDJM_02218 1.1e-66 ywpF S YwpF-like protein
PEBIFDJM_02219 4e-50 srtA 3.4.22.70 M Sortase family
PEBIFDJM_02220 2.4e-153 ywpD T Histidine kinase
PEBIFDJM_02221 3.9e-50 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
PEBIFDJM_02222 4.6e-82 fabZ 3.5.1.108, 4.2.1.59 I Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs
PEBIFDJM_02223 2.2e-196 S aspartate phosphatase
PEBIFDJM_02224 2.6e-141 flhP N flagellar basal body
PEBIFDJM_02225 1.7e-124 flhO N flagellar basal body
PEBIFDJM_02226 3.5e-180 mbl D Rod shape-determining protein
PEBIFDJM_02227 3e-44 spoIIID K Stage III sporulation protein D
PEBIFDJM_02228 4.7e-70 ywoH K COG1846 Transcriptional regulators
PEBIFDJM_02229 2.7e-211 ywoG EGP Major facilitator Superfamily
PEBIFDJM_02230 1.2e-231 ywoF P Right handed beta helix region
PEBIFDJM_02231 1.2e-280 ybbW FH COG1953 Cytosine uracil thiamine allantoin permeases
PEBIFDJM_02232 8.3e-241 ywoD EGP Major facilitator superfamily
PEBIFDJM_02233 2.6e-103 phzA Q Isochorismatase family
PEBIFDJM_02234 1.2e-77
PEBIFDJM_02235 1.3e-224 amt P Ammonium transporter
PEBIFDJM_02236 1.6e-58 nrgB K Belongs to the P(II) protein family
PEBIFDJM_02237 5.9e-103 bcrC 3.6.1.27 I COG0671 Membrane-associated phospholipid phosphatase
PEBIFDJM_02238 7.8e-73 ywnJ S VanZ like family
PEBIFDJM_02239 5.3e-116 spoIIQ M COG0739 Membrane proteins related to metalloendopeptidases
PEBIFDJM_02240 4.1e-89 ywnH 2.3.1.183 M COG1247 Sortase and related acyltransferases
PEBIFDJM_02241 5.7e-09 ywnC S Family of unknown function (DUF5362)
PEBIFDJM_02242 2.2e-70 ywnF S Family of unknown function (DUF5392)
PEBIFDJM_02243 1.2e-277 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PEBIFDJM_02244 1.6e-143 mta K transcriptional
PEBIFDJM_02245 1.7e-58 ywnC S Family of unknown function (DUF5362)
PEBIFDJM_02246 1.2e-112 ywnB S NAD(P)H-binding
PEBIFDJM_02247 1.7e-64 ywnA K Transcriptional regulator
PEBIFDJM_02248 0.0 ureC 3.5.1.5 E Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family
PEBIFDJM_02249 6.5e-63 ureB 3.5.1.5 E Belongs to the urease beta subunit family
PEBIFDJM_02250 6.3e-51 ureA 3.5.1.5 E Belongs to the urease gamma subunit family
PEBIFDJM_02251 3.8e-11 csbD K CsbD-like
PEBIFDJM_02252 3.8e-84 ywmF S Peptidase M50
PEBIFDJM_02254 1.9e-102 S response regulator aspartate phosphatase
PEBIFDJM_02255 2e-191 moaA 4.1.99.22, 4.6.1.17 H Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
PEBIFDJM_02256 2.6e-146 fdhD C Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
PEBIFDJM_02258 7.2e-121 ywmD S protein containing a von Willebrand factor type A (vWA) domain
PEBIFDJM_02259 5.1e-122 ywmC S protein containing a von Willebrand factor type A (vWA) domain
PEBIFDJM_02260 7.5e-178 spoIID D Stage II sporulation protein D
PEBIFDJM_02261 1.2e-241 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PEBIFDJM_02262 2e-132 ywmB S TATA-box binding
PEBIFDJM_02263 1.3e-32 ywzB S membrane
PEBIFDJM_02264 3.1e-86 ywmA
PEBIFDJM_02265 8.5e-53 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
PEBIFDJM_02266 1.2e-266 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
PEBIFDJM_02267 1.1e-150 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
PEBIFDJM_02268 1e-279 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
PEBIFDJM_02269 1.2e-89 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PEBIFDJM_02270 3.8e-45 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
PEBIFDJM_02271 1.6e-26 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
PEBIFDJM_02272 4.6e-129 atpB C it plays a direct role in the translocation of protons across the membrane
PEBIFDJM_02273 2.5e-62 atpI S ATP synthase
PEBIFDJM_02274 4.7e-114 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
PEBIFDJM_02275 2.1e-238 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
PEBIFDJM_02276 3.6e-94 ywlG S Belongs to the UPF0340 family
PEBIFDJM_02277 8.3e-81 rpiB 5.3.1.6 G Ribose 5-phosphate isomerase
PEBIFDJM_02278 1.3e-76 ywlE 3.1.3.48, 3.9.1.2, 5.3.1.6 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PEBIFDJM_02279 1.7e-91 mntP P Probably functions as a manganese efflux pump
PEBIFDJM_02280 1.5e-194 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
PEBIFDJM_02281 1.2e-76 ywlB 1.20.4.1, 2.3.1.1 E Belongs to the acetyltransferase family. ArgA subfamily
PEBIFDJM_02282 6.1e-112 spoIIR S stage II sporulation protein R
PEBIFDJM_02283 9.8e-56 ywlA S Uncharacterised protein family (UPF0715)
PEBIFDJM_02285 2.3e-159 prmC 2.1.1.297 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
PEBIFDJM_02286 9.5e-192 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
PEBIFDJM_02287 4.5e-67 yaeR E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PEBIFDJM_02288 6e-89 racA K Required for the formation of axial filaments and for anchoring the origin regions at the cell poles in sporulating cells, thus ensuring proper chromosome segregation in the prespore. Binds in a dispersed manner throughout the chromosome but preferentially to sites clustered in the origin portion of the chromosome, causing condensation of the chromosome and its remodeling into an elongated, anchored structure
PEBIFDJM_02289 8.6e-160 ywkB S Membrane transport protein
PEBIFDJM_02290 0.0 sfcA 1.1.1.38 C malic enzyme
PEBIFDJM_02291 5.4e-104 tdk 2.7.1.21 F thymidine kinase
PEBIFDJM_02292 1.1e-32 rpmE J Binds the 23S rRNA
PEBIFDJM_02293 2.8e-238 rho K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
PEBIFDJM_02294 9.5e-175 glpX 3.1.3.11, 3.1.3.37 G fructose-1,6-bisphosphatase
PEBIFDJM_02295 8.6e-240 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
PEBIFDJM_02296 1.5e-112 tal 2.2.1.2 G Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
PEBIFDJM_02297 7.2e-158 fbaA 4.1.2.13, 4.1.2.29 G Aldolase
PEBIFDJM_02298 1.1e-62 spo0F T COG0784 FOG CheY-like receiver
PEBIFDJM_02299 6e-91 ywjG S Domain of unknown function (DUF2529)
PEBIFDJM_02300 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
PEBIFDJM_02301 1.5e-49 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
PEBIFDJM_02302 3.7e-210 acdA 1.3.8.1, 1.3.8.7 I acyl-CoA dehydrogenase
PEBIFDJM_02303 0.0 fadF C COG0247 Fe-S oxidoreductase
PEBIFDJM_02304 2.3e-223 clsB I Belongs to the phospholipase D family. Cardiolipin synthase subfamily
PEBIFDJM_02305 1.5e-183 uvsE L Component in a DNA repair pathway. Removal of UV-light damaged nucleotides. Recognizes pyrimidine dimers and cleave a phosphodiester bond immediately 5' to the lesion
PEBIFDJM_02306 2.7e-42 ywjC
PEBIFDJM_02307 3.1e-95 ywjB H RibD C-terminal domain
PEBIFDJM_02308 0.0 ywjA V ABC transporter
PEBIFDJM_02309 5.5e-286 ywiE I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
PEBIFDJM_02310 1.8e-124 narI 1.7.5.1 C nitrate reductase, gamma
PEBIFDJM_02311 6.2e-94 narJ 1.7.5.1 C nitrate reductase
PEBIFDJM_02312 9.7e-296 narH 1.7.5.1 C Nitrate reductase, beta
PEBIFDJM_02313 0.0 narG 1.7.5.1 C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PEBIFDJM_02314 7e-86 arfM T cyclic nucleotide binding
PEBIFDJM_02315 1.7e-139 ywiC S YwiC-like protein
PEBIFDJM_02316 7.7e-129 fnr K helix_turn_helix, cAMP Regulatory protein
PEBIFDJM_02317 2.3e-213 narK P COG2223 Nitrate nitrite transporter
PEBIFDJM_02318 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
PEBIFDJM_02319 4.7e-73 ywiB S protein conserved in bacteria
PEBIFDJM_02320 1e-07 S Bacteriocin subtilosin A
PEBIFDJM_02321 4.9e-270 C Fe-S oxidoreductases
PEBIFDJM_02323 3.3e-132 cbiO V ABC transporter
PEBIFDJM_02324 1.5e-234 mgtA 3.6.3.2 P ATPase, P-type transporting, HAD superfamily, subfamily IC
PEBIFDJM_02325 1.4e-215 2.7.1.26, 2.7.7.2 L Peptidase, M16
PEBIFDJM_02326 2.9e-248 L Peptidase, M16
PEBIFDJM_02328 8.6e-246 ywhL CO amine dehydrogenase activity
PEBIFDJM_02329 2.4e-192 ywhK CO amine dehydrogenase activity
PEBIFDJM_02330 2.6e-78 S aspartate phosphatase
PEBIFDJM_02332 9.2e-169 speB 3.5.3.11 E Belongs to the arginase family
PEBIFDJM_02333 1.4e-158 speE 2.5.1.16 E Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
PEBIFDJM_02334 0.0 pbpG 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
PEBIFDJM_02335 4.8e-49
PEBIFDJM_02336 3.4e-94 ywhD S YwhD family
PEBIFDJM_02337 5.1e-119 ywhC S Peptidase family M50
PEBIFDJM_02338 2.7e-25 dmpI 5.3.2.6 G 4-oxalocrotonate tautomerase
PEBIFDJM_02339 9.5e-71 ywhA K Transcriptional regulator
PEBIFDJM_02340 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
PEBIFDJM_02342 2e-237 mmr U Major Facilitator Superfamily
PEBIFDJM_02343 6.2e-79 yffB K Transcriptional regulator
PEBIFDJM_02344 5.4e-89 ywgA 2.1.1.72, 3.1.21.3
PEBIFDJM_02345 1.8e-256 ywfO S COG1078 HD superfamily phosphohydrolases
PEBIFDJM_02346 3.1e-36 ywzC S Belongs to the UPF0741 family
PEBIFDJM_02347 1e-110 rsfA_1
PEBIFDJM_02348 1.7e-157 ywfM EG EamA-like transporter family
PEBIFDJM_02349 6.6e-156 lipL 2.3.1.200, 2.3.1.204 H Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes
PEBIFDJM_02350 1.1e-156 cysL K Transcriptional regulator
PEBIFDJM_02351 5.6e-175 pta 2.3.1.19, 2.3.1.8, 3.6.3.21 C In Salmonella this enzyme is required for ethanolamine catabolism
PEBIFDJM_02352 3.3e-146 ywfI C May function as heme-dependent peroxidase
PEBIFDJM_02353 2.9e-137 IQ Enoyl-(Acyl carrier protein) reductase
PEBIFDJM_02354 2.7e-235 ywfG 2.6.1.83 E Aminotransferase class I and II
PEBIFDJM_02355 1.9e-209 bacE EGP Major facilitator Superfamily
PEBIFDJM_02356 4.7e-271 purD 6.3.2.49, 6.3.4.13 F Part of the bacABCDEFG operon responsible for the biosynthesis of bacilysin, an irreversible inactivator of the glutaminase domain of glucosamine synthetase. Catalyzes the formation of alpha-dipeptides from various L-amino acids in the presence of ATP. In vivo catalyzes the ligation of L-alanine and L-anticapsin (epoxycyclohexanonyl-Ala) to produce the final bacilysin antibiotic (L-Ala-L-4S-cyclohexenonyl-Ala dipeptide)
PEBIFDJM_02357 1.5e-138 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PEBIFDJM_02358 1.3e-136 bacB 5.3.3.19, 5.4.99.5 S Part of the bacABCDEF operon responsible for the biosynthesis of the nonribosomally synthesized dipeptide antibiotic bacilysin, composed of L-alanine and L-anticapsin. Bacilysin is an irreversible inactivator of the glutaminase domain of glucosamine synthetase. BacB catalyzes the allylic isomerization of the
PEBIFDJM_02359 8.6e-113 pheA 1.1.1.3, 1.3.1.12, 4.1.1.100, 4.2.1.51, 5.4.99.5 E Part of the bacABCDEF operon responsible for the biosynthesis of the nonribosomally synthesized dipeptide antibiotic bacilysin, composed of L-alanine and L-anticapsin. Bacilysin is an irreversible inactivator of the glutaminase domain of glucosamine synthetase. BacA is an unusual prephenate decarboxylase that avoids the typical aromatization of the cyclohexadienol ring of prephenate. BacA catalyzes the protonation of prephenate (1-carboxy-4-hydroxy-alpha-oxo-2,5-cyclohexadiene-1- propanoic acid) at C6 position, followed by a decarboxylation to produce the endocyclic-delta(4),delta(8)-7R-dihydro- hydroxyphenylpyruvate (en-H2HPP). En-H2HPP is able to undergo a slow nonenzymatic isomerization to produce the exocyclic- delta(3),delta(5)-dihydro-hydroxyphenylpyruvate (ex-H2HPP). BacA isomerizes only the pro-R double bond in prephenate
PEBIFDJM_02360 1.5e-204 ywfA EGP Major facilitator Superfamily
PEBIFDJM_02361 5.7e-261 lysP E amino acid
PEBIFDJM_02362 0.0 rocB E arginine degradation protein
PEBIFDJM_02363 3e-295 putA 1.2.1.88, 1.5.5.2 C Belongs to the aldehyde dehydrogenase family. RocA subfamily
PEBIFDJM_02364 2.8e-243 rocG 1.4.1.2, 1.4.1.3 E Belongs to the Glu Leu Phe Val dehydrogenases family
PEBIFDJM_02365 1.2e-77
PEBIFDJM_02366 1.3e-86 spsL 5.1.3.13 M Spore Coat
PEBIFDJM_02367 4.5e-160 spsK 1.1.1.133 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
PEBIFDJM_02368 1.5e-180 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
PEBIFDJM_02369 7.1e-138 spsI 2.7.7.24 M Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
PEBIFDJM_02370 2e-186 spsG M Spore Coat
PEBIFDJM_02371 9.7e-132 spsF M Spore Coat
PEBIFDJM_02372 1.6e-213 spsE 2.5.1.56 M acid synthase
PEBIFDJM_02373 1.2e-163 spsD 2.3.1.210 K Spore Coat
PEBIFDJM_02374 3e-223 spsC E Belongs to the DegT DnrJ EryC1 family
PEBIFDJM_02375 2.3e-267 spsB M Capsule polysaccharide biosynthesis protein
PEBIFDJM_02376 1.8e-144 spsA M Spore Coat
PEBIFDJM_02377 4.8e-75 gerQ S Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA
PEBIFDJM_02378 4.3e-59 ywdK S small membrane protein
PEBIFDJM_02379 3.7e-238 ywdJ F Xanthine uracil
PEBIFDJM_02380 6.6e-48 ywdI S Family of unknown function (DUF5327)
PEBIFDJM_02381 1.6e-260 ywdH 1.2.1.3 C Belongs to the aldehyde dehydrogenase family
PEBIFDJM_02382 9.5e-129 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
PEBIFDJM_02383 1.1e-152 ywdF GT2,GT4 S Glycosyltransferase like family 2
PEBIFDJM_02384 3.5e-146 thiD 2.5.1.3, 2.7.1.35, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
PEBIFDJM_02385 2e-28 ywdA
PEBIFDJM_02386 6.8e-278 scrB 3.2.1.26, 3.2.1.65, 3.2.1.80 GH32 G invertase
PEBIFDJM_02387 1.6e-252 scrA 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PEBIFDJM_02388 5.7e-138 focA P Formate/nitrite transporter
PEBIFDJM_02389 1.2e-149 sacT K transcriptional antiterminator
PEBIFDJM_02391 0.0 vpr O Belongs to the peptidase S8 family
PEBIFDJM_02392 3.3e-186 ywcH C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PEBIFDJM_02393 2.1e-137 nfrA 1.5.1.38, 1.5.1.39 C Oxidoreductase
PEBIFDJM_02394 1.1e-188 rodA D Belongs to the SEDS family
PEBIFDJM_02395 1.4e-204 S Acetyltransferase
PEBIFDJM_02396 6e-39 ywcE S Required for proper spore morphogenesis. Important for spore germination
PEBIFDJM_02397 2.6e-64 qoxD 1.10.3.12, 1.9.3.1 C quinol oxidase, subunit
PEBIFDJM_02398 1.2e-111 qoxC 1.10.3.12, 1.9.3.1 C quinol oxidase, subunit
PEBIFDJM_02399 0.0 qoxB 1.10.3.12, 1.9.3.1 C Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
PEBIFDJM_02400 2.1e-177 cyoA 1.10.3.10, 1.10.3.12 C Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I
PEBIFDJM_02401 1e-35 ywzA S membrane
PEBIFDJM_02402 3e-303 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
PEBIFDJM_02403 3.4e-227 galK 2.7.1.6 G Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
PEBIFDJM_02404 9.5e-60 gtcA S GtrA-like protein
PEBIFDJM_02405 1.1e-121 ywcC K transcriptional regulator
PEBIFDJM_02407 9.8e-49 ywcB S Protein of unknown function, DUF485
PEBIFDJM_02408 3.1e-268 ywcA S Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PEBIFDJM_02409 6.1e-111 ywbO Q dithiol-disulfide isomerase involved in polyketide biosynthesis
PEBIFDJM_02410 4.9e-224 ywbN P Dyp-type peroxidase family protein
PEBIFDJM_02411 1e-183 ycdO P periplasmic lipoprotein involved in iron transport
PEBIFDJM_02412 3.1e-254 P COG0672 High-affinity Fe2 Pb2 permease
PEBIFDJM_02413 9.4e-113 thiE 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
PEBIFDJM_02414 2.4e-142 thiM 2.7.1.50 H Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
PEBIFDJM_02415 1.6e-152 ywbI K Transcriptional regulator
PEBIFDJM_02416 6.5e-58 ywbH S Increases the activity of extracellular murein hydrolases possibly by mediating their export via hole formation. Inhibited by the antiholin-like proteins LrgAB. In an unstressed cell, the LrgAB products probably inhibit the function of the CidA protein. When a cell is stressed by the addition of antibiotics or by other factors in the environment, CidA possibly oligomerizes within the bacterial cell membrane, creating lesions that disrupt the proton motive force, which in turn results in loss of cell viability. These lesions are also hypothesized to regulate the subsequent cell lysis by either allowing the murein hydrolases access to the cell wall substrate and or regulating their activity by a
PEBIFDJM_02417 2.3e-111 ywbG M effector of murein hydrolase
PEBIFDJM_02418 1.1e-207 ywbF EGP Major facilitator Superfamily
PEBIFDJM_02419 4e-27 ywbE S Uncharacterized conserved protein (DUF2196)
PEBIFDJM_02420 5.4e-220 ywbD 2.1.1.191 J Methyltransferase
PEBIFDJM_02421 9.9e-67 ywbC 4.4.1.5 E glyoxalase
PEBIFDJM_02422 3.6e-241 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PEBIFDJM_02423 4.6e-269 epr 3.4.21.62 O Belongs to the peptidase S8 family
PEBIFDJM_02424 5.2e-243 scrA 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PEBIFDJM_02425 1.2e-152 sacY K transcriptional antiterminator
PEBIFDJM_02426 4.5e-168 gspA M General stress
PEBIFDJM_02427 1.3e-123 ywaF S Integral membrane protein
PEBIFDJM_02428 2e-86 ywaE K Transcriptional regulator
PEBIFDJM_02429 1.9e-231 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
PEBIFDJM_02430 2e-250 ywaD 3.4.11.10, 3.4.11.6 S PA domain
PEBIFDJM_02431 1.4e-92 K Helix-turn-helix XRE-family like proteins
PEBIFDJM_02432 4.2e-49 4.1.1.44 S Carboxymuconolactone decarboxylase family
PEBIFDJM_02433 4e-130 ynfM EGP Major facilitator Superfamily
PEBIFDJM_02434 5e-116 ywaC 2.7.6.5 S protein conserved in bacteria
PEBIFDJM_02435 1.5e-164 menA 2.5.1.74 H Belongs to the MenA family. Type 1 subfamily
PEBIFDJM_02436 1.1e-289 dltA 6.1.1.13 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PEBIFDJM_02437 1.2e-232 dltB M membrane protein involved in D-alanine export
PEBIFDJM_02438 1.5e-36 dltC 6.1.1.13 IQ Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PEBIFDJM_02439 2.3e-231 dltD M COG3966 Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
PEBIFDJM_02440 1.2e-137 dltE M Belongs to the short-chain dehydrogenases reductases (SDR) family
PEBIFDJM_02441 3.1e-206 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PEBIFDJM_02442 1.1e-253 licH 3.2.1.86 GT4 G COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
PEBIFDJM_02443 6.7e-38 licA 2.7.1.196, 2.7.1.205 G phosphotransferase system
PEBIFDJM_02444 2.8e-249 licC G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PEBIFDJM_02445 2.3e-50 licB 2.7.1.196, 2.7.1.205 G transporter subunit IIB
PEBIFDJM_02446 0.0 licR 2.7.1.202 GKT Mga helix-turn-helix domain
PEBIFDJM_02447 1.1e-19 yxzF
PEBIFDJM_02448 1e-110 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
PEBIFDJM_02449 0.0 katX 1.11.1.6 P serves to protect cells from the toxic effects of hydrogen peroxide
PEBIFDJM_02450 1.6e-211 yxlH EGP Major facilitator Superfamily
PEBIFDJM_02451 2.6e-138 yxlG S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PEBIFDJM_02452 4.8e-165 yxlF V ABC transporter, ATP-binding protein
PEBIFDJM_02453 7.6e-28 yxlE S Phospholipase_D-nuclease N-terminal
PEBIFDJM_02454 1.2e-31
PEBIFDJM_02455 3.9e-48 yxlC S Family of unknown function (DUF5345)
PEBIFDJM_02456 1.1e-84 sigY K Belongs to the sigma-70 factor family. ECF subfamily
PEBIFDJM_02457 6.6e-254 yxlA F Belongs to the purine-cytosine permease (2.A.39) family
PEBIFDJM_02458 6.3e-159 nnrD 4.2.1.136, 5.1.99.6 G Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
PEBIFDJM_02459 0.0 cydD V ATP-binding protein
PEBIFDJM_02460 2.4e-311 cydD V ATP-binding
PEBIFDJM_02461 1.2e-188 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase, subunit II
PEBIFDJM_02462 6.9e-267 cydA 1.10.3.14 C oxidase, subunit
PEBIFDJM_02463 2.1e-228 cimH C COG3493 Na citrate symporter
PEBIFDJM_02464 4.7e-310 3.4.24.84 O Peptidase family M48
PEBIFDJM_02466 1.8e-153 yxkH G Polysaccharide deacetylase
PEBIFDJM_02467 5.9e-205 msmK P Belongs to the ABC transporter superfamily
PEBIFDJM_02468 1.2e-163 lrp QT PucR C-terminal helix-turn-helix domain
PEBIFDJM_02469 5.7e-272 aldY 1.2.1.3 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PEBIFDJM_02470 1.9e-147 yxkD S Uncharacterised 5xTM membrane BCR, YitT family COG1284
PEBIFDJM_02471 2.3e-195 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
PEBIFDJM_02472 1e-76 S Protein of unknown function (DUF1453)
PEBIFDJM_02473 1.2e-190 yxjM T Signal transduction histidine kinase
PEBIFDJM_02474 2.1e-109 K helix_turn_helix, Lux Regulon
PEBIFDJM_02475 8.8e-234 pepT 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
PEBIFDJM_02478 3.2e-86 yxjI S LURP-one-related
PEBIFDJM_02479 1.3e-220 yxjG 2.1.1.14 E Methionine synthase
PEBIFDJM_02480 8.2e-218 yxjG 2.1.1.14 E Methionine synthase
PEBIFDJM_02481 2.8e-137 IQ Catalyzes the formation of acetoacetate from 3-hydroxybutyrate
PEBIFDJM_02482 5.2e-116 scoB 2.8.3.5 I COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit
PEBIFDJM_02483 1.8e-130 scoA 2.8.3.5 I COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
PEBIFDJM_02484 9.1e-251 yxjC EG COG2610 H gluconate symporter and related permeases
PEBIFDJM_02485 5.5e-158 rlmA 2.1.1.187 Q Methyltransferase domain
PEBIFDJM_02486 1.2e-211 nupG F Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PEBIFDJM_02487 4.2e-105 T Domain of unknown function (DUF4163)
PEBIFDJM_02488 3e-47 yxiS
PEBIFDJM_02489 0.0 katE 1.11.1.6, 3.5.1.124 P serves to protect cells from the toxic effects of hydrogen peroxide
PEBIFDJM_02490 6.6e-224 citH C Citrate transporter
PEBIFDJM_02491 1.2e-142 exoK GH16 M licheninase activity
PEBIFDJM_02492 4.1e-150 licT K transcriptional antiterminator
PEBIFDJM_02493 1.1e-111
PEBIFDJM_02494 2.3e-229 yxiO S COG2270 Permeases of the major facilitator superfamily
PEBIFDJM_02495 5.6e-264 dbpA 3.6.4.13 JKL DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes
PEBIFDJM_02496 7.5e-211 3.2.1.14 GH18 E GDSL-like Lipase/Acylhydrolase
PEBIFDJM_02497 1.9e-53 padR K Transcriptional regulator PadR-like family
PEBIFDJM_02498 1.7e-61 S Protein of unknown function (DUF2812)
PEBIFDJM_02501 3.1e-44 yxiJ S YxiJ-like protein
PEBIFDJM_02504 1.5e-34
PEBIFDJM_02505 1.3e-84 yxiI S Protein of unknown function (DUF2716)
PEBIFDJM_02506 1.3e-138
PEBIFDJM_02508 2.4e-22 S Protein of unknown function (DUF2750)
PEBIFDJM_02509 2.6e-52 yxxG
PEBIFDJM_02510 1.1e-66 yxiG
PEBIFDJM_02511 1.8e-75
PEBIFDJM_02512 8.4e-10 S Protein of unknown function (DUF4240)
PEBIFDJM_02513 4.2e-75 S Protein of unknown function (DUF4240)
PEBIFDJM_02514 1.1e-142
PEBIFDJM_02516 2e-54
PEBIFDJM_02517 0.0 wapA M COG3209 Rhs family protein
PEBIFDJM_02518 9.6e-164 yxxF EG EamA-like transporter family
PEBIFDJM_02519 1.7e-126 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PEBIFDJM_02520 7.1e-122 1.14.11.45 E 2OG-Fe dioxygenase
PEBIFDJM_02521 5.4e-72 yxiE T Belongs to the universal stress protein A family
PEBIFDJM_02522 4.2e-280 bglH 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PEBIFDJM_02523 0.0 bglF 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PEBIFDJM_02524 5.5e-53
PEBIFDJM_02525 7.8e-214 S nuclease activity
PEBIFDJM_02526 3.1e-38 yxiC S Family of unknown function (DUF5344)
PEBIFDJM_02527 4.6e-21 S Domain of unknown function (DUF5082)
PEBIFDJM_02528 0.0 L HKD family nuclease
PEBIFDJM_02530 1.1e-58 nudG 3.6.1.55, 3.6.1.65 L COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes
PEBIFDJM_02531 1.3e-276 yxiA 3.2.1.99 GH43 G Belongs to the glycosyl hydrolase 43 family
PEBIFDJM_02532 5e-78 hutP K Antiterminator that binds to cis-acting regulatory sequences on the mRNA in the presence of histidine, thereby suppressing transcription termination and activating the hut operon for histidine utilization
PEBIFDJM_02533 1.5e-283 hutH 4.3.1.3 E Histidine ammonia-lyase
PEBIFDJM_02534 0.0 hutU 4.2.1.49 E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
PEBIFDJM_02535 8.2e-235 hutI 3.5.2.7 Q Imidazolone-5-propionate hydrolase
PEBIFDJM_02536 1.5e-180 hutG 3.5.3.11, 3.5.3.8 E Catalyzes the conversion of N-formimidoyl-L-glutamate to L-glutamate and formamide
PEBIFDJM_02537 3.4e-250 lysP E amino acid
PEBIFDJM_02538 2.1e-233 pdp 2.4.2.2, 2.4.2.4 F phosphorylase
PEBIFDJM_02539 2.2e-205 nupC F Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PEBIFDJM_02540 2e-115 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
PEBIFDJM_02541 3.5e-174 deoR K COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
PEBIFDJM_02542 2e-152 yxxB S Domain of Unknown Function (DUF1206)
PEBIFDJM_02543 8.3e-199 eutH E Ethanolamine utilisation protein, EutH
PEBIFDJM_02544 4.4e-247 yxeQ S MmgE/PrpD family
PEBIFDJM_02545 3.6e-213 yxeP 3.5.1.47 E hydrolase activity
PEBIFDJM_02546 1.2e-132 yxeO 3.6.3.21 P ABC transporter, ATP-binding protein
PEBIFDJM_02547 1.2e-107 yxeN P COG0765 ABC-type amino acid transport system, permease component
PEBIFDJM_02548 2.5e-144 yxeM M Belongs to the bacterial solute-binding protein 3 family
PEBIFDJM_02549 1.7e-90 yxeL K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PEBIFDJM_02550 8.3e-254 yxeK C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PEBIFDJM_02551 2.7e-185 yxeI 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
PEBIFDJM_02552 3.1e-150 yidA S hydrolases of the HAD superfamily
PEBIFDJM_02555 1.3e-20 yxeE
PEBIFDJM_02556 9.6e-16 yxeD
PEBIFDJM_02557 8.5e-69
PEBIFDJM_02558 1.1e-175 fhuD P ABC transporter
PEBIFDJM_02559 3.4e-58 yxeA S Protein of unknown function (DUF1093)
PEBIFDJM_02560 0.0 yxdM V ABC transporter (permease)
PEBIFDJM_02561 9.4e-141 yxdL V ABC transporter, ATP-binding protein
PEBIFDJM_02562 7.6e-180 T PhoQ Sensor
PEBIFDJM_02563 4.2e-124 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PEBIFDJM_02564 5.4e-161 iolJ 4.1.2.13, 4.1.2.29 F Produces dihydroxyacetone phosphate (DHAP or glycerone phosphate) and malonic semialdehyde (MSA or 3-oxopropanoate) from 6-phospho-5-dehydro-2-deoxy-D-gluconate (DKGP)
PEBIFDJM_02565 1.1e-147 iolI 5.3.99.11 G Involved in the reversible interconverion of 2-keto-myo- inositol (2KMI, inosose or 2,4,6 3,5-pentahydroxycyclohexanone) to 1-keto-D-chiro-inositol (1KDCI or 2,3,5 4,6- pentahydroxycyclohexanone)
PEBIFDJM_02566 8.6e-167 iolH G Xylose isomerase-like TIM barrel
PEBIFDJM_02567 2.8e-196 iolG 1.1.1.18, 1.1.1.369 S Involved in the oxidation of myo-inositol (MI) and D- chiro-inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D-chiro-inositol (1KDCI), respectively
PEBIFDJM_02568 9.7e-215 iolF EGP Major facilitator Superfamily
PEBIFDJM_02569 4.7e-176 iolE 4.2.1.44 G Catalyzes the dehydration of inosose (2-keto-myo- inositol, 2KMI or 2,4,6 3,5-pentahydroxycyclohexanone) to 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi- inositol)
PEBIFDJM_02570 0.0 iolD 3.7.1.22 E Involved in the cleavage of the C1-C2 bond of 3D- (3,5 4)-trihydroxycyclohexane-1,2-dione (THcHDO) to yield 5-deoxy- glucuronate (5DG)
PEBIFDJM_02571 4.9e-179 iolC 2.7.1.92 G Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP)
PEBIFDJM_02572 1.3e-153 iolB 5.3.1.30 G Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate)
PEBIFDJM_02573 3e-281 iolA 1.2.1.18, 1.2.1.27 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PEBIFDJM_02574 3.3e-138 iolR K COG1349 Transcriptional regulators of sugar metabolism
PEBIFDJM_02575 8.3e-176 iolS C Aldo keto reductase
PEBIFDJM_02577 8.3e-48 yxcD S Protein of unknown function (DUF2653)
PEBIFDJM_02578 3.3e-245 csbC EGP Major facilitator Superfamily
PEBIFDJM_02579 0.0 htpG O Molecular chaperone. Has ATPase activity
PEBIFDJM_02581 8.2e-151 IQ Enoyl-(Acyl carrier protein) reductase
PEBIFDJM_02582 5.9e-208 yxbF K Bacterial regulatory proteins, tetR family
PEBIFDJM_02583 1.5e-247 alkH 1.2.1.3 C Belongs to the aldehyde dehydrogenase family
PEBIFDJM_02584 1e-84 yxbD 3.2.2.20 K Acetyltransferase (GNAT) domain
PEBIFDJM_02585 2.2e-187 yxbC 1.14.11.47 S A domain family that is part of the cupin metalloenzyme superfamily.
PEBIFDJM_02586 1.3e-126 yxbB Q Met-10+ like-protein
PEBIFDJM_02587 1.9e-43 S Coenzyme PQQ synthesis protein D (PqqD)
PEBIFDJM_02588 1.1e-86 yxnB
PEBIFDJM_02589 0.0 asnB 6.3.5.4 E Asparagine synthase
PEBIFDJM_02590 7.6e-214 yxaM U MFS_1 like family
PEBIFDJM_02591 6.4e-91 S PQQ-like domain
PEBIFDJM_02592 7.9e-65 S Family of unknown function (DUF5391)
PEBIFDJM_02593 1.1e-75 yxaI S membrane protein domain
PEBIFDJM_02594 3.5e-227 P Protein of unknown function (DUF418)
PEBIFDJM_02595 4.2e-197 yxaG 1.13.11.24 S AraC-like ligand binding domain
PEBIFDJM_02596 4.6e-100 yxaF K Transcriptional regulator
PEBIFDJM_02597 5.2e-198 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PEBIFDJM_02598 4.4e-71 yxaD K helix_turn_helix multiple antibiotic resistance protein
PEBIFDJM_02599 5.2e-50 S LrgA family
PEBIFDJM_02600 6.5e-117 yxaC M effector of murein hydrolase
PEBIFDJM_02601 3.7e-193 yxaB GM Polysaccharide pyruvyl transferase
PEBIFDJM_02602 9.5e-206 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
PEBIFDJM_02603 7.3e-127 gntR K transcriptional
PEBIFDJM_02604 1.6e-301 gntK 2.7.1.12, 2.7.1.17, 2.7.1.5 G Belongs to the FGGY kinase family
PEBIFDJM_02605 4.5e-231 gntP EG COG2610 H gluconate symporter and related permeases
PEBIFDJM_02606 1.9e-272 gnd 1.1.1.343, 1.1.1.44 G Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
PEBIFDJM_02607 2.1e-105 ahpC 1.11.1.15 O Alkyl hydroperoxide reductase
PEBIFDJM_02608 1.9e-286 ahpF O Alkyl hydroperoxide reductase
PEBIFDJM_02609 1e-289 bglA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PEBIFDJM_02610 1.4e-31 2.7.1.199 G phosphoenolpyruvate-dependent sugar phosphotransferase system
PEBIFDJM_02611 2.1e-123 yydK K Transcriptional regulator
PEBIFDJM_02612 3e-273 L COG0210 Superfamily I DNA and RNA helicases
PEBIFDJM_02613 5.2e-18 3.4.24.84 O PFAM Peptidase M48
PEBIFDJM_02614 2.6e-154
PEBIFDJM_02615 4.4e-15
PEBIFDJM_02616 7.6e-13
PEBIFDJM_02617 1.6e-118 S ABC-2 family transporter protein
PEBIFDJM_02618 3.5e-109 prrC P ABC transporter
PEBIFDJM_02619 0.0 fbp 3.1.3.11 G Firmicute fructose-1,6-bisphosphatase
PEBIFDJM_02620 0.0 L AAA domain
PEBIFDJM_02621 1.9e-247 L Uncharacterized conserved protein (DUF2075)
PEBIFDJM_02622 1.2e-41 S MazG-like family
PEBIFDJM_02624 9.3e-153 L RNA-directed DNA polymerase
PEBIFDJM_02626 1.3e-126 2.7.7.49 L DNA polymerase
PEBIFDJM_02629 2.3e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
PEBIFDJM_02630 1.1e-09 S YyzF-like protein
PEBIFDJM_02631 7e-66
PEBIFDJM_02632 5.1e-234 fdhA 1.1.1.1, 1.1.1.14, 1.1.1.284, 1.2.1.46 E COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases
PEBIFDJM_02634 1.7e-30 yycQ S Protein of unknown function (DUF2651)
PEBIFDJM_02635 6e-200 yycP
PEBIFDJM_02636 2.9e-131 yycO S Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
PEBIFDJM_02637 4.5e-85 yycN 2.3.1.128 K Acetyltransferase
PEBIFDJM_02638 3.8e-188 S aspartate phosphatase
PEBIFDJM_02640 2.3e-167 rocF 3.5.3.1, 3.5.3.11 E Belongs to the arginase family
PEBIFDJM_02641 9.7e-261 rocE E amino acid
PEBIFDJM_02642 7.3e-233 rocD 2.6.1.11, 2.6.1.13, 2.6.1.17 E Catalyzes the interconversion of ornithine to glutamate semialdehyde
PEBIFDJM_02643 4.4e-258 rocR KT COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
PEBIFDJM_02644 1.8e-172 phoR3 2.7.13.3 T COG0642 Signal transduction histidine kinase
PEBIFDJM_02645 3.4e-94 K PFAM response regulator receiver
PEBIFDJM_02646 1.2e-73 S Peptidase propeptide and YPEB domain
PEBIFDJM_02647 1.9e-33 S Peptidase propeptide and YPEB domain
PEBIFDJM_02648 8.7e-218 htrA 3.4.21.107 O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PEBIFDJM_02649 1.9e-149 vicX 3.1.26.11 S COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I
PEBIFDJM_02650 1.8e-153 yycI S protein conserved in bacteria
PEBIFDJM_02651 2.9e-257 yycH S protein conserved in bacteria
PEBIFDJM_02652 0.0 vicK 2.7.13.3 T Histidine kinase
PEBIFDJM_02653 1.1e-132 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PEBIFDJM_02658 3e-248 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
PEBIFDJM_02659 7.5e-76 yycE 3.4.21.26, 5.3.1.24 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PEBIFDJM_02660 1.2e-250 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
PEBIFDJM_02661 1.9e-29 yycD S Uncharacterized protein conserved in bacteria (DUF2188)
PEBIFDJM_02663 1.9e-15 yycC K YycC-like protein
PEBIFDJM_02664 1.2e-219 yeaN P COG2807 Cyanate permease
PEBIFDJM_02665 0.0 yycA M COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PEBIFDJM_02666 2.2e-73 rplI J binds to the 23S rRNA
PEBIFDJM_02667 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
PEBIFDJM_02668 8.3e-160 yybS S membrane
PEBIFDJM_02670 2.9e-63 cotF M Spore coat protein
PEBIFDJM_02671 1.7e-66 ydeP3 K Transcriptional regulator
PEBIFDJM_02672 1.1e-164 ppaC 3.6.1.1 C Inorganic pyrophosphatase
PEBIFDJM_02673 9.5e-61
PEBIFDJM_02675 1.8e-240 yybO G COG0477 Permeases of the major facilitator superfamily
PEBIFDJM_02676 3.7e-110 K TipAS antibiotic-recognition domain
PEBIFDJM_02677 5.3e-123
PEBIFDJM_02678 2.9e-66 yybH S SnoaL-like domain
PEBIFDJM_02679 1.6e-122 yybG S Pentapeptide repeat-containing protein
PEBIFDJM_02680 2.3e-218 ynfM EGP Major facilitator Superfamily
PEBIFDJM_02681 1.1e-164 yybE K Transcriptional regulator
PEBIFDJM_02682 2e-79 yjcF S Acetyltransferase (GNAT) domain
PEBIFDJM_02683 9.5e-75 yybC
PEBIFDJM_02684 1.1e-124 S Metallo-beta-lactamase superfamily
PEBIFDJM_02685 5.6e-77 yybA 2.3.1.57 K transcriptional
PEBIFDJM_02686 7.2e-69 yjcF S Acetyltransferase (GNAT) domain
PEBIFDJM_02687 5.5e-96 yyaS S Membrane
PEBIFDJM_02688 7.1e-92 yyaR K Acetyltransferase (GNAT) domain
PEBIFDJM_02689 3.5e-66 yyaQ S YjbR
PEBIFDJM_02690 3.8e-107 yyaP 1.5.1.3 H RibD C-terminal domain
PEBIFDJM_02691 6.6e-246 tetL EGP Major facilitator Superfamily
PEBIFDJM_02692 5.6e-29 yyaL O COG1331 Highly conserved protein containing a thioredoxin domain
PEBIFDJM_02693 4.3e-57 L Recombinase
PEBIFDJM_02694 8e-123 S response regulator aspartate phosphatase
PEBIFDJM_02695 1.1e-44 S Domain of unknown function with cystatin-like fold (DUF4467)
PEBIFDJM_02696 1.2e-80 yddI
PEBIFDJM_02697 1.2e-185 yddH CBM50 M Lysozyme-like
PEBIFDJM_02698 0.0 yddG S maturation of SSU-rRNA
PEBIFDJM_02699 4.8e-54 S Domain of unknown function (DUF1874)
PEBIFDJM_02700 0.0 yddE S AAA-like domain
PEBIFDJM_02701 3.2e-92 yddD S TcpE family
PEBIFDJM_02702 5.1e-40 yddC
PEBIFDJM_02703 1.5e-168 yddB S Conjugative transposon protein TcpC
PEBIFDJM_02705 3.1e-41 yddA
PEBIFDJM_02708 4e-60
PEBIFDJM_02709 5.5e-200 nicK L Replication initiation factor
PEBIFDJM_02710 1.7e-222 ydcQ D Ftsk spoiiie family protein
PEBIFDJM_02712 1.7e-63 S Bacterial protein of unknown function (DUF961)
PEBIFDJM_02714 4.9e-28
PEBIFDJM_02715 8.6e-11
PEBIFDJM_02716 6.3e-34 yvaO K Transcriptional
PEBIFDJM_02717 1.8e-39 immA E Pfam:DUF955
PEBIFDJM_02719 5.7e-24 yyaL O COG1331 Highly conserved protein containing a thioredoxin domain
PEBIFDJM_02720 3.9e-113 K Bacterial transcription activator, effector binding domain
PEBIFDJM_02721 7.9e-99 S Protein of unknown function (DUF554)
PEBIFDJM_02722 1.2e-21 yyaL O Highly conserved protein containing a thioredoxin domain
PEBIFDJM_02723 0.0 yyaL O COG1331 Highly conserved protein containing a thioredoxin domain
PEBIFDJM_02724 8e-168 yyaK S CAAX protease self-immunity
PEBIFDJM_02725 1.8e-243 EGP Major facilitator superfamily
PEBIFDJM_02726 2.8e-94 maa 2.3.1.79 S Bacterial transferase hexapeptide (six repeats)
PEBIFDJM_02727 8.4e-66 yyaH 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PEBIFDJM_02728 1.9e-52 ccpB 3.5.1.4, 5.1.1.1 K Transcriptional regulator
PEBIFDJM_02729 1.9e-60 ccpB 3.5.1.4, 5.1.1.1 K Transcriptional regulator
PEBIFDJM_02730 5.8e-143 xth 3.1.11.2 L exodeoxyribonuclease III
PEBIFDJM_02731 5.1e-37 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
PEBIFDJM_02732 2.9e-69 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
PEBIFDJM_02733 7.3e-46 rpsF J Binds together with S18 to 16S ribosomal RNA
PEBIFDJM_02734 4e-201 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
PEBIFDJM_02735 0.0 yyaE C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PEBIFDJM_02736 2.3e-33 yyzM S protein conserved in bacteria
PEBIFDJM_02737 5.2e-176 yyaD S Membrane
PEBIFDJM_02738 1.6e-111 yyaC S Sporulation protein YyaC
PEBIFDJM_02739 4.6e-149 spo0J K Belongs to the ParB family
PEBIFDJM_02740 2.2e-134 soj D COG1192 ATPases involved in chromosome partitioning
PEBIFDJM_02741 2.5e-74 S Bacterial PH domain
PEBIFDJM_02742 1.9e-150 noc D Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage
PEBIFDJM_02743 4.1e-130 rsmG 2.1.1.170 J Specifically methylates the N7 position of guanine in position 535 of 16S rRNA
PEBIFDJM_02744 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
PEBIFDJM_02745 3.7e-249 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
PEBIFDJM_02746 6.5e-108 jag S single-stranded nucleic acid binding R3H
PEBIFDJM_02747 1.7e-118 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
PEBIFDJM_02748 3e-54 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
PEBIFDJM_02749 6e-252 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
PEBIFDJM_02750 1.8e-204 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
PEBIFDJM_02751 2.4e-33 yaaA S S4 domain
PEBIFDJM_02752 7e-206 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
PEBIFDJM_02753 1.8e-37 yaaB S Domain of unknown function (DUF370)
PEBIFDJM_02754 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PEBIFDJM_02755 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
PEBIFDJM_02757 1e-249 ybaR P COG0659 Sulfate permease and related transporters (MFS superfamily)
PEBIFDJM_02759 1.3e-160 ybaS 1.1.1.58 S Na -dependent transporter
PEBIFDJM_02760 2.8e-137 ybbA S Putative esterase
PEBIFDJM_02761 3e-179 feuC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PEBIFDJM_02762 1.1e-176 feuB P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PEBIFDJM_02763 1.2e-164 feuA P Iron-uptake system-binding protein
PEBIFDJM_02764 1.9e-305 ybbB K COG2207 AraC-type DNA-binding domain-containing proteins
PEBIFDJM_02765 2.1e-238 ybbC 3.2.1.52 S protein conserved in bacteria
PEBIFDJM_02766 0.0 ybbD 3.2.1.52 G Belongs to the glycosyl hydrolase 3 family
PEBIFDJM_02767 9.2e-253 yfeW 3.4.16.4 V Belongs to the UPF0214 family
PEBIFDJM_02768 1.7e-233 ybbF 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PEBIFDJM_02769 2.5e-150 ybbH K transcriptional
PEBIFDJM_02770 1.5e-161 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
PEBIFDJM_02771 1.9e-86 ybbJ J acetyltransferase
PEBIFDJM_02772 3.9e-78 ybbK 2.4.2.1, 6.3.2.4 S Protein of unknown function (DUF523)
PEBIFDJM_02778 2.5e-98 sigW K Belongs to the sigma-70 factor family. ECF subfamily
PEBIFDJM_02779 4.1e-102 rsiW K Is the anti-sigma factor for SigW. The presence of RsiW leads to the inactivation of SigW, and its proteolytic destruction to sigma-W activation
PEBIFDJM_02780 2.7e-146 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
PEBIFDJM_02781 5.7e-224 ybbR S protein conserved in bacteria
PEBIFDJM_02782 7.9e-252 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
PEBIFDJM_02783 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
PEBIFDJM_02784 1.2e-98 bcrC 3.6.1.27 I Bacitracin ABC transporter permease
PEBIFDJM_02785 7.5e-275 ndhF 1.6.5.3 CP COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit
PEBIFDJM_02786 0.0 ybcC S Belongs to the UPF0753 family
PEBIFDJM_02787 2e-94 can 4.2.1.1 P carbonic anhydrase
PEBIFDJM_02789 8.7e-47
PEBIFDJM_02790 4.7e-61 ybcI S Uncharacterized conserved protein (DUF2294)
PEBIFDJM_02792 5.1e-50 ybzH K Helix-turn-helix domain
PEBIFDJM_02793 1.4e-201 ybcL EGP Major facilitator Superfamily
PEBIFDJM_02795 1.2e-238 J 4Fe-4S single cluster domain
PEBIFDJM_02796 4.6e-277 V CAAX protease self-immunity
PEBIFDJM_02797 4.8e-131 skfE V ABC transporter
PEBIFDJM_02798 6.1e-247 skfF S ABC transporter
PEBIFDJM_02799 8.6e-90 C HEAT repeats
PEBIFDJM_02800 3.7e-78 txn CO Thioredoxin-like
PEBIFDJM_02801 9e-181 S hydrolases or acyltransferases (alpha beta hydrolase superfamily)
PEBIFDJM_02802 3.8e-122 T Transcriptional regulatory protein, C terminal
PEBIFDJM_02803 1.7e-171 T His Kinase A (phospho-acceptor) domain
PEBIFDJM_02805 2.7e-135 KLT Protein tyrosine kinase
PEBIFDJM_02806 8.7e-102 ybdN
PEBIFDJM_02807 4.3e-37 ybdN
PEBIFDJM_02808 4.7e-216 ybdO S Domain of unknown function (DUF4885)
PEBIFDJM_02809 1.5e-258 yifK E COG1113 Gamma-aminobutyrate permease and related permeases
PEBIFDJM_02810 3.7e-38 csgA S Sigma-G-dependent sporulation-specific SASP protein
PEBIFDJM_02811 4.9e-30 ybxH S Family of unknown function (DUF5370)
PEBIFDJM_02812 1.8e-150 ybxI 3.5.2.6 V beta-lactamase
PEBIFDJM_02813 7.8e-246 cypC 1.11.2.4, 1.14.14.1 Q Cytochrome P450
PEBIFDJM_02814 4.9e-41 ybyB
PEBIFDJM_02815 1.8e-290 ybeC E amino acid
PEBIFDJM_02816 4.8e-165 glpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
PEBIFDJM_02817 7.3e-258 glpT G -transporter
PEBIFDJM_02818 1.5e-34 S Protein of unknown function (DUF2651)
PEBIFDJM_02819 1.1e-169 ybfA 3.4.15.5 K FR47-like protein
PEBIFDJM_02820 3.8e-216 ybfB G COG0477 Permeases of the major facilitator superfamily
PEBIFDJM_02822 4.4e-161 ybfH EG EamA-like transporter family
PEBIFDJM_02823 1.5e-144 msmR K AraC-like ligand binding domain
PEBIFDJM_02824 2.1e-33 K sigma factor activity
PEBIFDJM_02825 9e-21 xhlB S SPP1 phage holin
PEBIFDJM_02826 3.2e-164 2.7.1.50, 3.5.2.6 GH19 M Lysin motif
PEBIFDJM_02827 3.9e-57
PEBIFDJM_02828 1.1e-212 purT 2.1.2.2 F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
PEBIFDJM_02829 6.9e-178 mpr 3.4.21.19 M Belongs to the peptidase S1B family
PEBIFDJM_02831 1e-167 S Alpha/beta hydrolase family
PEBIFDJM_02832 3.2e-95 pssA 2.7.8.8 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
PEBIFDJM_02833 2.7e-85 ybfM S SNARE associated Golgi protein
PEBIFDJM_02834 4.8e-148 psd 4.1.1.65 I Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer)
PEBIFDJM_02835 3e-44 ybfN
PEBIFDJM_02836 5.7e-253 S Erythromycin esterase
PEBIFDJM_02837 1.1e-166 ybfP K Transcriptional regulator
PEBIFDJM_02838 1.5e-191 yceA S Belongs to the UPF0176 family
PEBIFDJM_02839 2.4e-215 gltP C Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PEBIFDJM_02840 0.0 ptsG 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PEBIFDJM_02841 1.5e-135 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
PEBIFDJM_02842 4.9e-128 K UTRA
PEBIFDJM_02844 6.1e-202 ilvE 2.6.1.42 E Branched-chain amino acid aminotransferase
PEBIFDJM_02845 5.7e-261 mmuP E amino acid
PEBIFDJM_02846 3.5e-182 mmuM 1.5.1.20, 2.1.1.10 H homocysteine
PEBIFDJM_02847 5.6e-256 agcS E Sodium alanine symporter
PEBIFDJM_02848 2.5e-186 glsA 3.5.1.2 E Belongs to the glutaminase family
PEBIFDJM_02849 4.2e-229 phoQ 2.7.13.3 T Histidine kinase
PEBIFDJM_02850 1.2e-169 glnL T Regulator
PEBIFDJM_02851 2.7e-174 kdgD 4.2.1.41 EM 5-dehydro-4-deoxyglucarate dehydratase activity
PEBIFDJM_02852 2e-272 ycbD C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PEBIFDJM_02853 5.9e-255 gudP G COG0477 Permeases of the major facilitator superfamily
PEBIFDJM_02854 1.5e-269 gudD 4.2.1.40 M Belongs to the mandelate racemase muconate lactonizing enzyme family
PEBIFDJM_02855 1.5e-124 ycbG K FCD
PEBIFDJM_02856 3.1e-297 garD 4.2.1.42, 4.2.1.7 G Altronate
PEBIFDJM_02857 2.2e-173 ycbJ S Macrolide 2'-phosphotransferase
PEBIFDJM_02858 4.4e-24 rtpA K Tryptophan RNA-binding attenuator protein inhibitory protein
PEBIFDJM_02859 1.9e-167 eamA1 EG spore germination
PEBIFDJM_02860 1.9e-124 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PEBIFDJM_02861 1.7e-168 T PhoQ Sensor
PEBIFDJM_02862 2e-166 ycbN V ABC transporter, ATP-binding protein
PEBIFDJM_02863 1.5e-113 S ABC-2 family transporter protein
PEBIFDJM_02864 8.2e-53 ycbP S Protein of unknown function (DUF2512)
PEBIFDJM_02865 2.2e-78 sleB 3.5.1.28 M Cell wall
PEBIFDJM_02866 2.5e-135 ycbR T vWA found in TerF C terminus
PEBIFDJM_02867 0.0 phoD 3.1.3.1 P COG3540 Phosphodiesterase alkaline phosphatase D
PEBIFDJM_02868 5e-28 tatA U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
PEBIFDJM_02869 6.4e-123 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PEBIFDJM_02870 1.2e-120 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
PEBIFDJM_02871 1.1e-206 ycbU E Selenocysteine lyase
PEBIFDJM_02872 5.8e-229 lmrB EGP the major facilitator superfamily
PEBIFDJM_02873 1.6e-100 yxaF K Transcriptional regulator
PEBIFDJM_02874 2e-200 ansB 3.5.1.1 EJ COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D
PEBIFDJM_02875 6.2e-114 lip 3.1.1.3 S acetyltransferases and hydrolases with the alpha beta hydrolase fold
PEBIFDJM_02876 3.4e-59 S RDD family
PEBIFDJM_02877 2.1e-199 yccF K DNA-templated transcriptional preinitiation complex assembly
PEBIFDJM_02878 5.6e-159 2.7.13.3 T GHKL domain
PEBIFDJM_02879 1.2e-126 lytR_2 T LytTr DNA-binding domain
PEBIFDJM_02880 1.2e-132 natA 3.6.3.7 CP ATPases associated with a variety of cellular activities
PEBIFDJM_02881 9.3e-201 natB CP ABC-2 family transporter protein
PEBIFDJM_02882 3.5e-174 yccK C Aldo keto reductase
PEBIFDJM_02883 2.5e-176 ycdA S Domain of unknown function (DUF5105)
PEBIFDJM_02884 1.4e-278 ycdB K Belongs to the sigma-70 factor family. ECF subfamily
PEBIFDJM_02885 2.5e-267 ycdC K Belongs to the sigma-70 factor family. ECF subfamily
PEBIFDJM_02886 1.1e-94 cwlK M D-alanyl-D-alanine carboxypeptidase
PEBIFDJM_02887 1.2e-173 S response regulator aspartate phosphatase
PEBIFDJM_02888 2.3e-139 IQ Enoyl-(Acyl carrier protein) reductase
PEBIFDJM_02889 0.0 ycdG 3.2.1.10 GH13 G COG0366 Glycosidases
PEBIFDJM_02890 1.2e-166 adcA P Belongs to the bacterial solute-binding protein 9 family
PEBIFDJM_02891 9.4e-132 adcC P 'COG1121 ABC-type Mn Zn transport systems, ATPase component'
PEBIFDJM_02892 1.7e-135 adcB P COG1108 ABC-type Mn2 Zn2 transport systems, permease components
PEBIFDJM_02893 4.2e-186 yceB C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PEBIFDJM_02894 2.5e-109 yceC 3.5.4.33 T proteins involved in stress response, homologs of TerZ and
PEBIFDJM_02895 2.8e-105 yceD T proteins involved in stress response, homologs of TerZ and
PEBIFDJM_02896 4.6e-108 yceE T proteins involved in stress response, homologs of TerZ and
PEBIFDJM_02897 6.3e-137 terC P Protein of unknown function (DUF475)
PEBIFDJM_02898 0.0 yceG S Putative component of 'biosynthetic module'
PEBIFDJM_02899 2.6e-192 yceH P Belongs to the TelA family
PEBIFDJM_02900 1.5e-217 naiP P Uncharacterised MFS-type transporter YbfB
PEBIFDJM_02901 1.4e-207 yceJ EGP Uncharacterised MFS-type transporter YbfB
PEBIFDJM_02902 1.6e-45 K helix_turn_helix, Arsenical Resistance Operon Repressor
PEBIFDJM_02903 1.9e-228 proV 3.6.3.32 E glycine betaine
PEBIFDJM_02904 1.3e-127 opuAB P glycine betaine
PEBIFDJM_02905 5.3e-164 opuAC E glycine betaine
PEBIFDJM_02906 3.7e-218 amhX S amidohydrolase
PEBIFDJM_02907 5.6e-256 ycgA S Membrane
PEBIFDJM_02908 4.1e-81 ycgB
PEBIFDJM_02909 0.0 amyE 3.2.1.1 GH13 G alpha-amylase
PEBIFDJM_02910 4.3e-183 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
PEBIFDJM_02911 5.7e-289 lctP C L-lactate permease
PEBIFDJM_02912 6.2e-269 mdr EGP Major facilitator Superfamily
PEBIFDJM_02913 3.4e-77 emrR K helix_turn_helix multiple antibiotic resistance protein
PEBIFDJM_02914 6.8e-113 ycgF E Lysine exporter protein LysE YggA
PEBIFDJM_02915 1.2e-151 yqcI S YqcI/YcgG family
PEBIFDJM_02916 1.6e-249 ycgH E COG1113 Gamma-aminobutyrate permease and related permeases
PEBIFDJM_02917 2.4e-112 ycgI S Domain of unknown function (DUF1989)
PEBIFDJM_02918 1.5e-149 nadE 6.3.1.5 H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
PEBIFDJM_02919 7.3e-109 tmrB S AAA domain
PEBIFDJM_02921 3e-104 aroK 2.7.1.71, 4.2.3.4 F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
PEBIFDJM_02922 9e-144 yafE Q ubiE/COQ5 methyltransferase family
PEBIFDJM_02923 3.3e-175 oxyR3 K LysR substrate binding domain
PEBIFDJM_02924 2.7e-182 cah 3.1.1.41 Q Acetyl xylan esterase (AXE1)
PEBIFDJM_02925 2.9e-145 ycgL S Predicted nucleotidyltransferase
PEBIFDJM_02926 5.1e-170 ycgM E Proline dehydrogenase
PEBIFDJM_02927 7.3e-294 rocA 1.2.1.88, 1.5.5.2 C Belongs to the aldehyde dehydrogenase family. RocA subfamily
PEBIFDJM_02928 9e-248 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PEBIFDJM_02929 1.6e-227 ycgP QT COG2508 Regulator of polyketide synthase expression
PEBIFDJM_02930 2.6e-147 ycgQ S membrane
PEBIFDJM_02931 1.2e-139 ycgR S permeases
PEBIFDJM_02932 2.8e-162 I alpha/beta hydrolase fold
PEBIFDJM_02933 1.3e-193 ycgT 1.18.1.2, 1.19.1.1 C Ferredoxin--NADP reductase
PEBIFDJM_02934 9.3e-283 cobA 2.1.1.107, 4.2.1.75 H Belongs to the precorrin methyltransferase family
PEBIFDJM_02935 4.6e-57 nirD 1.7.1.15 P Nitrite reductase
PEBIFDJM_02936 0.0 nirB 1.7.1.15 C Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
PEBIFDJM_02937 0.0 nasC C Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PEBIFDJM_02938 0.0 nirB 1.7.1.15 C Assimilatory nitrate reductase (electron transfer subunit)
PEBIFDJM_02939 1.3e-221 nasA P COG2223 Nitrate nitrite transporter
PEBIFDJM_02940 1.9e-169 folE2 3.5.4.16 S Converts GTP to 7,8-dihydroneopterin triphosphate
PEBIFDJM_02941 3.4e-106 yciB M ErfK YbiS YcfS YnhG
PEBIFDJM_02942 1.6e-227 yciC S GTPases (G3E family)
PEBIFDJM_02943 3.5e-115 yecS P COG0765 ABC-type amino acid transport system, permease component
PEBIFDJM_02944 1.7e-130 yckB ET COG0834 ABC-type amino acid transport signal transduction systems, periplasmic component domain
PEBIFDJM_02945 4e-75 yckC S membrane
PEBIFDJM_02946 7.8e-52 yckD S Protein of unknown function (DUF2680)
PEBIFDJM_02947 5.7e-39 K MarR family
PEBIFDJM_02948 9.3e-24
PEBIFDJM_02949 1.3e-120 S AAA domain
PEBIFDJM_02950 7.2e-296 yckE 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PEBIFDJM_02951 8.5e-69 nin S Competence protein J (ComJ)
PEBIFDJM_02952 7.8e-71 nucA M Deoxyribonuclease NucA/NucB
PEBIFDJM_02953 9.6e-186 tlpC 2.7.13.3 NT chemotaxis protein
PEBIFDJM_02954 4.6e-97 hxlB 4.1.2.43, 5.3.1.27 G SIS domain
PEBIFDJM_02955 3.6e-106 hxlA 4.1.2.43 G 3-hexulose-6-phosphate synthase
PEBIFDJM_02956 1.3e-63 hxlR K transcriptional
PEBIFDJM_02957 0.0 srfAA Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PEBIFDJM_02958 0.0 srfAB Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PEBIFDJM_02959 0.0 srfAC Q COG1020 Non-ribosomal peptide synthetase modules and related proteins
PEBIFDJM_02960 1.7e-139 srfAD Q thioesterase
PEBIFDJM_02961 4.4e-225 EGP Major Facilitator Superfamily
PEBIFDJM_02962 1.2e-84 S YcxB-like protein
PEBIFDJM_02963 2.2e-160 ycxC EG EamA-like transporter family
PEBIFDJM_02964 1.2e-247 ycxD K GntR family transcriptional regulator
PEBIFDJM_02965 3.3e-113 acpT 2.7.8.7 H Belongs to the P-Pant transferase superfamily
PEBIFDJM_02966 9.7e-115 yczE S membrane
PEBIFDJM_02967 2.8e-134 tcyC 3.6.3.21 E COG1126 ABC-type polar amino acid transport system, ATPase component
PEBIFDJM_02968 6.2e-123 tcyB P COG0765 ABC-type amino acid transport system, permease component
PEBIFDJM_02969 1.2e-138 tcyA ET Belongs to the bacterial solute-binding protein 3 family
PEBIFDJM_02970 1.2e-160 bsdA K LysR substrate binding domain
PEBIFDJM_02971 7.6e-109 ubiX 2.5.1.129 H Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN
PEBIFDJM_02972 4.1e-283 yclC 4.1.1.61 H Decarboxylase involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions. It is able to catalyze the reversible decarboxylation of 4-hydroxybenzoate
PEBIFDJM_02973 4e-39 bsdD 4.1.1.61 S response to toxic substance
PEBIFDJM_02974 5.9e-82 yclD
PEBIFDJM_02975 1.4e-158 yclE 3.4.11.5 S Alpha beta hydrolase
PEBIFDJM_02976 2.1e-266 dtpT E amino acid peptide transporter
PEBIFDJM_02977 5e-307 yclG M Pectate lyase superfamily protein
PEBIFDJM_02979 7.5e-281 gerKA EG Spore germination protein
PEBIFDJM_02980 5.2e-226 gerKC S spore germination
PEBIFDJM_02981 5.6e-195 gerKB F Spore germination protein
PEBIFDJM_02982 5.6e-121 yclH P ABC transporter
PEBIFDJM_02983 2.8e-202 yclI V ABC transporter (permease) YclI
PEBIFDJM_02984 2.3e-127 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PEBIFDJM_02985 8.3e-260 yclK 2.7.13.3 T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
PEBIFDJM_02986 5.2e-71 S aspartate phosphatase
PEBIFDJM_02989 1.7e-241 lysC 2.7.2.4 E Belongs to the aspartokinase family
PEBIFDJM_02990 3.5e-161 yclN P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PEBIFDJM_02991 1.4e-162 fatC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PEBIFDJM_02992 4.7e-137 yclP 3.6.3.34 P ABC transporter, ATP-binding protein
PEBIFDJM_02993 9.4e-167 yclQ P COG4607 ABC-type enterochelin transport system, periplasmic component
PEBIFDJM_02994 4.1e-251 ycnB EGP Major facilitator Superfamily
PEBIFDJM_02995 5.5e-153 ycnC K Transcriptional regulator
PEBIFDJM_02996 2.2e-134 nfrA2 1.5.1.38, 1.5.1.39 C Oxidoreductase
PEBIFDJM_02997 1.6e-45 ycnE S Monooxygenase
PEBIFDJM_02998 2.2e-51 yczG K helix_turn_helix, Arsenical Resistance Operon Repressor
PEBIFDJM_02999 4.4e-269 gabR K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PEBIFDJM_03000 1.5e-244 gabT 2.6.1.19, 2.6.1.22 E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
PEBIFDJM_03001 3.8e-265 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PEBIFDJM_03002 6.1e-149 glcU U Glucose uptake
PEBIFDJM_03003 4.9e-145 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PEBIFDJM_03004 5.4e-99 ycnI S protein conserved in bacteria
PEBIFDJM_03005 2.1e-307 ycnJ P protein, homolog of Cu resistance protein CopC
PEBIFDJM_03006 2.8e-105 ycnK K COG1349 Transcriptional regulators of sugar metabolism
PEBIFDJM_03007 7.3e-56
PEBIFDJM_03008 5.6e-240 mtlA 2.7.1.197 G COG2213 Phosphotransferase system, mannitol-specific IIBC component
PEBIFDJM_03009 2e-71 mtlF 2.7.1.197 G COG4668 Mannitol fructose-specific phosphotransferase system, IIA domain
PEBIFDJM_03010 2.4e-209 mtlD 1.1.1.17 G COG0246 Mannitol-1-phosphate altronate dehydrogenases
PEBIFDJM_03011 6.5e-201 ycsA 1.1.1.83, 1.1.1.93, 4.1.1.73 CE Tartrate dehydrogenase
PEBIFDJM_03012 2.1e-97 sipT 3.4.21.89 U Belongs to the peptidase S26 family
PEBIFDJM_03013 7e-107 M1-673 3.1.1.45 Q COG0412 Dienelactone hydrolase and related enzymes
PEBIFDJM_03014 5.4e-68 fabZ 3.5.1.108, 4.2.1.59 I FabA-like domain
PEBIFDJM_03015 8e-137 ycsE 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
PEBIFDJM_03016 4.7e-140 ycsF S Belongs to the UPF0271 (lamB) family
PEBIFDJM_03017 1.6e-211 ycsG P COG1914 Mn2 and Fe2 transporters of the NRAMP family
PEBIFDJM_03018 9.6e-149 ycsI S Belongs to the D-glutamate cyclase family
PEBIFDJM_03019 1.8e-133 kipI 3.5.1.54 E Allophanate hydrolase subunit 1
PEBIFDJM_03020 5.6e-186 kipA 6.3.4.6 E Allophanate hydrolase subunit 2
PEBIFDJM_03021 2.1e-132 kipR K Transcriptional regulator
PEBIFDJM_03022 9.9e-120 ycsK E anatomical structure formation involved in morphogenesis
PEBIFDJM_03024 1.4e-49 yczJ S biosynthesis
PEBIFDJM_03025 0.0 pbpC 3.4.16.4 M Penicillin-binding Protein
PEBIFDJM_03026 8.3e-173 ydhF S Oxidoreductase
PEBIFDJM_03027 0.0 mtlR K transcriptional regulator, MtlR
PEBIFDJM_03028 1.6e-293 ydaB IQ acyl-CoA ligase
PEBIFDJM_03029 3.8e-97 ydaC Q Methyltransferase domain
PEBIFDJM_03030 4.1e-161 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PEBIFDJM_03031 1.2e-96 MA20_27600 5.3.1.15 S Cupin 2, conserved barrel domain protein
PEBIFDJM_03032 8.3e-99 rimL 1.1.1.25 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PEBIFDJM_03033 2e-76 ydaG 1.4.3.5 S general stress protein
PEBIFDJM_03034 7.1e-139 amj U Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane
PEBIFDJM_03035 2.1e-45 ydzA EGP Major facilitator Superfamily
PEBIFDJM_03036 2.5e-74 lrpC K Transcriptional regulator
PEBIFDJM_03037 0.0 topB 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
PEBIFDJM_03038 5.3e-206 ydaJ M Belongs to the glycosyl hydrolase 8 (cellulase D) family
PEBIFDJM_03039 1.3e-151 ydaK T Diguanylate cyclase, GGDEF domain
PEBIFDJM_03040 0.0 ydaL S Uncharacterized protein conserved in bacteria (DUF2334)
PEBIFDJM_03041 4.5e-233 ydaM M Glycosyl transferase family group 2
PEBIFDJM_03042 0.0 ydaN S Bacterial cellulose synthase subunit
PEBIFDJM_03043 0.0 ydaO E amino acid
PEBIFDJM_03044 1.1e-77 mutT 3.6.1.13, 3.6.1.55 L Belongs to the Nudix hydrolase family
PEBIFDJM_03045 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
PEBIFDJM_03046 9.4e-40
PEBIFDJM_03047 5e-224 mntH P H( )-stimulated, divalent metal cation uptake system
PEBIFDJM_03049 3.3e-77 ydaT S Uncharacterized protein conserved in bacteria (DUF2188)
PEBIFDJM_03050 8.4e-148 ydbA 3.6.3.4, 3.6.3.54 P EcsC protein family
PEBIFDJM_03052 8.9e-59 ydbB G Cupin domain
PEBIFDJM_03053 1.2e-61 ydbC S Domain of unknown function (DUF4937
PEBIFDJM_03054 2.3e-153 ydbD P Catalase
PEBIFDJM_03055 5.7e-197 dctB G COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component
PEBIFDJM_03056 2.8e-296 dctS 2.7.13.3 T Signal transduction histidine kinase regulating citrate malate metabolism
PEBIFDJM_03057 8.1e-120 dctR T COG4565 Response regulator of citrate malate metabolism
PEBIFDJM_03058 1.8e-226 dctA U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
PEBIFDJM_03059 9.7e-181 ydbI S AI-2E family transporter
PEBIFDJM_03060 3.6e-171 ydbJ V ABC transporter, ATP-binding protein
PEBIFDJM_03061 3.6e-124 ydbK S COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component
PEBIFDJM_03062 2.7e-52 ydbL
PEBIFDJM_03063 5.7e-219 ydbM 1.3.8.1 I acyl-CoA dehydrogenase
PEBIFDJM_03064 1.1e-18 S Fur-regulated basic protein B
PEBIFDJM_03065 2.2e-07 S Fur-regulated basic protein A
PEBIFDJM_03066 2.5e-150 yeaB P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PEBIFDJM_03067 2.3e-56 ydbP 2.7.1.180, 5.3.4.1 CO Thioredoxin
PEBIFDJM_03068 1.1e-200 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
PEBIFDJM_03069 2.8e-255 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
PEBIFDJM_03070 9e-249 cshA 3.6.4.13 JKL DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
PEBIFDJM_03071 2.1e-82 ydbS S Bacterial PH domain
PEBIFDJM_03072 2.1e-258 ydbT S Membrane
PEBIFDJM_03073 4.5e-106 ydcA 3.4.21.105 S membrane protein (homolog of Drosophila rhomboid)
PEBIFDJM_03074 8e-58 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
PEBIFDJM_03075 2.9e-183 ydcC M COG2834 Outer membrane lipoprotein-sorting protein
PEBIFDJM_03076 5.6e-222 alr 5.1.1.1, 5.1.1.5 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PEBIFDJM_03077 4.8e-42 ndoAI K transcriptional regulators containing the CopG Arc MetJ DNA-binding domain and a metal-binding domain
PEBIFDJM_03078 2.5e-56 ndoA L Toxic component of a toxin-antitoxin (TA) module
PEBIFDJM_03079 4.8e-143 rsbR T Positive regulator of sigma-B
PEBIFDJM_03080 5.2e-57 rsbS T antagonist
PEBIFDJM_03081 2.9e-69 rsbT 2.7.11.1 T COG2172 Anti-sigma regulatory factor (Ser Thr protein kinase)
PEBIFDJM_03082 7.1e-189 rsbU 3.1.3.3 KT phosphatase
PEBIFDJM_03083 7e-53 rsbV T Belongs to the anti-sigma-factor antagonist family
PEBIFDJM_03084 2.4e-86 rsbW 2.7.11.1 F Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B)
PEBIFDJM_03085 3.4e-138 sigB K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
PEBIFDJM_03086 4.8e-108 rsbX 3.1.3.16, 3.1.3.3 KT Sigma factor PP2C-like phosphatases
PEBIFDJM_03087 0.0 yhgF K COG2183 Transcriptional accessory protein
PEBIFDJM_03088 8.9e-83 ydcK S Belongs to the SprT family
PEBIFDJM_03096 3.2e-114 yecA E amino acid
PEBIFDJM_03097 4.6e-107 K Transcriptional regulator
PEBIFDJM_03098 2.5e-74 rimJ2 J Acetyltransferase (GNAT) domain
PEBIFDJM_03099 1.2e-43
PEBIFDJM_03100 5e-142 L A nuclease of the HNH/ENDO VII superfamily with conserved LHH
PEBIFDJM_03101 5.6e-34 K Helix-turn-helix XRE-family like proteins
PEBIFDJM_03102 1.9e-40
PEBIFDJM_03103 1.3e-190 des 1.14.19.23, 1.14.19.45 I fatty acid desaturase
PEBIFDJM_03104 8.7e-30 cspL K Cold shock
PEBIFDJM_03105 6.1e-79 carD K Transcription factor
PEBIFDJM_03106 4.8e-141 ydzE EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PEBIFDJM_03107 1.4e-164 rhaS5 K AraC-like ligand binding domain
PEBIFDJM_03108 1.3e-171 yicL EG COG0697 Permeases of the drug metabolite transporter (DMT) superfamily
PEBIFDJM_03109 8.9e-164 ydeE K AraC family transcriptional regulator
PEBIFDJM_03110 2.1e-260 K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PEBIFDJM_03111 6.7e-216 ydeG EGP Major facilitator superfamily
PEBIFDJM_03112 1.4e-44 ydeH
PEBIFDJM_03113 2.1e-103 ydeI S Bacteriocin-protection, YdeI or OmpD-Associated
PEBIFDJM_03114 4.5e-99
PEBIFDJM_03115 1.1e-31 S SNARE associated Golgi protein
PEBIFDJM_03116 4.9e-15 ptsH G PTS HPr component phosphorylation site
PEBIFDJM_03117 8.8e-85 K Transcriptional regulator C-terminal region
PEBIFDJM_03119 4.5e-152 ydeK EG -transporter
PEBIFDJM_03120 2.3e-270 ydeL K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PEBIFDJM_03121 4.6e-73 maoC I N-terminal half of MaoC dehydratase
PEBIFDJM_03122 1.1e-104 ydeN S Serine hydrolase
PEBIFDJM_03123 8.9e-56 K HxlR-like helix-turn-helix
PEBIFDJM_03124 1.2e-152 yqfU S Uncharacterized protein conserved in bacteria (DUF2179)
PEBIFDJM_03125 4.8e-69 ydeP K Transcriptional regulator
PEBIFDJM_03126 3.6e-108 ydeQ S NADPH-quinone reductase (modulator of drug activity B)
PEBIFDJM_03127 3.6e-192 ydeR EGP Major facilitator Superfamily
PEBIFDJM_03128 2.1e-103 ydeS K Transcriptional regulator
PEBIFDJM_03129 2.8e-57 arsR K transcriptional
PEBIFDJM_03130 1.7e-230 arsB P Involved in arsenical resistance. Thought to form the channel of an arsenite pump
PEBIFDJM_03131 3.7e-145 ydfB J GNAT acetyltransferase
PEBIFDJM_03132 2.8e-149 lytR K Transcriptional regulator
PEBIFDJM_03133 1e-92 nodB1 G deacetylase
PEBIFDJM_03134 4e-156
PEBIFDJM_03135 4.5e-213 T GHKL domain
PEBIFDJM_03136 2.6e-122 T Transcriptional regulatory protein, C terminal
PEBIFDJM_03137 9.9e-142 ydfC EG EamA-like transporter family
PEBIFDJM_03138 4.6e-274 ydfD K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PEBIFDJM_03139 5e-116 ydfE S Flavin reductase like domain
PEBIFDJM_03140 8.6e-122 ydfF K helix_turn_helix, Arsenical Resistance Operon Repressor
PEBIFDJM_03141 3.8e-78 ydfG S Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
PEBIFDJM_03143 5.3e-180 ydfH 2.7.13.3 T Histidine kinase
PEBIFDJM_03144 9.3e-110 ydfI K Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PEBIFDJM_03145 0.0 ydfJ S drug exporters of the RND superfamily
PEBIFDJM_03146 1e-170 S Alpha/beta hydrolase family
PEBIFDJM_03147 8.5e-117 S Protein of unknown function (DUF554)
PEBIFDJM_03148 9.2e-147 K Bacterial transcription activator, effector binding domain
PEBIFDJM_03149 5.9e-155 fieF P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PEBIFDJM_03150 3.1e-110 ydfN C nitroreductase
PEBIFDJM_03151 4e-186 ydfO E COG0346 Lactoylglutathione lyase and related lyases
PEBIFDJM_03152 1.2e-62 mhqP S DoxX
PEBIFDJM_03153 2e-55 traF CO Thioredoxin
PEBIFDJM_03154 7.1e-15 ydgA S Spore germination protein gerPA/gerPF
PEBIFDJM_03155 6.3e-29
PEBIFDJM_03157 4.4e-118 ydfR S Protein of unknown function (DUF421)
PEBIFDJM_03158 4.7e-20 ydfS S Protein of unknown function (DUF421)
PEBIFDJM_03159 1.5e-89 ydfS S Protein of unknown function (DUF421)
PEBIFDJM_03160 2.2e-75 cotP O Belongs to the small heat shock protein (HSP20) family
PEBIFDJM_03161 1.4e-37 ydgA S Spore germination protein gerPA/gerPF
PEBIFDJM_03162 1.3e-41 ydgB S Spore germination protein gerPA/gerPF
PEBIFDJM_03163 1.9e-93 K Bacterial regulatory proteins, tetR family
PEBIFDJM_03164 1.8e-51 S DoxX-like family
PEBIFDJM_03165 1.3e-84 yycN 2.3.1.128 K Acetyltransferase
PEBIFDJM_03166 3.9e-134 1.1.1.18, 1.1.1.369 S Oxidoreductase family, NAD-binding Rossmann fold
PEBIFDJM_03167 2e-119 purR K helix_turn _helix lactose operon repressor
PEBIFDJM_03168 7.7e-191 csbC EGP Major facilitator Superfamily
PEBIFDJM_03169 4.4e-104 G Xylose isomerase-like TIM barrel
PEBIFDJM_03170 6.1e-299 expZ S ABC transporter
PEBIFDJM_03171 2.9e-249 cycA E COG1113 Gamma-aminobutyrate permease and related permeases
PEBIFDJM_03172 2.5e-89 dinB S DinB family
PEBIFDJM_03173 4.7e-80 K helix_turn_helix multiple antibiotic resistance protein
PEBIFDJM_03174 0.0 ydgH S drug exporters of the RND superfamily
PEBIFDJM_03175 3e-113 drgA C nitroreductase
PEBIFDJM_03176 7.1e-69 ydgJ K Winged helix DNA-binding domain
PEBIFDJM_03177 1.6e-208 tcaB EGP Major facilitator Superfamily
PEBIFDJM_03178 3.5e-121 ydhB S membrane transporter protein
PEBIFDJM_03179 6.5e-122 ydhC K FCD
PEBIFDJM_03180 1.6e-243 ydhD M Glycosyl hydrolase
PEBIFDJM_03181 2.7e-227 ydhE CG COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase
PEBIFDJM_03182 7.4e-124
PEBIFDJM_03183 1.5e-258 phoB 3.1.3.1 P Belongs to the alkaline phosphatase family
PEBIFDJM_03184 4.3e-67 frataxin S Domain of unknown function (DU1801)
PEBIFDJM_03186 8.6e-84 K Acetyltransferase (GNAT) domain
PEBIFDJM_03187 7.6e-180 ydhJ S Metal dependent phosphohydrolases with conserved 'HD' motif.
PEBIFDJM_03188 8.5e-99 ydhK M Protein of unknown function (DUF1541)
PEBIFDJM_03189 4.6e-200 pbuE EGP Major facilitator Superfamily
PEBIFDJM_03190 1.9e-47 ydhM 2.7.1.196, 2.7.1.205 G phosphotransferase system
PEBIFDJM_03191 5.1e-51 ydhN3 2.7.1.196, 2.7.1.205 G phosphotransferase system
PEBIFDJM_03192 2.6e-239 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
PEBIFDJM_03193 2.8e-284 ydhP 3.2.1.21, 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
PEBIFDJM_03194 1.1e-132 ydhQ K UTRA
PEBIFDJM_03195 2.5e-169 gmuE 2.7.1.2, 2.7.1.4 GK COG1940 Transcriptional regulator sugar kinase
PEBIFDJM_03196 6.2e-187 manA 5.3.1.8 G mannose-6-phosphate isomerase
PEBIFDJM_03197 2.9e-212 gmuG 3.2.1.78 GH26 G Belongs to the glycosyl hydrolase 26 family
PEBIFDJM_03198 2.3e-156 ydhU P Catalase
PEBIFDJM_03201 2e-244 malC P COG1175 ABC-type sugar transport systems, permease components
PEBIFDJM_03202 9.5e-147 malD P transport
PEBIFDJM_03203 2.4e-156 malA S Protein of unknown function (DUF1189)
PEBIFDJM_03204 0.0 yvdK 2.4.1.8 GH65 G Glycoside hydrolase, family 65
PEBIFDJM_03205 0.0 malL 3.2.1.10 GH13 G COG0366 Glycosidases
PEBIFDJM_03206 2.8e-117 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S Haloacid dehalogenase-like hydrolase
PEBIFDJM_03207 1.2e-103 clpP 3.4.21.92 OU Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
PEBIFDJM_03209 1.2e-182 S Patatin-like phospholipase
PEBIFDJM_03210 8.4e-270 ygaK C COG0277 FAD FMN-containing dehydrogenases
PEBIFDJM_03211 6.3e-93 yvdQ S Protein of unknown function (DUF3231)
PEBIFDJM_03212 2.7e-49 sugE P Small Multidrug Resistance protein
PEBIFDJM_03213 6.7e-51 ykkC P Small Multidrug Resistance protein
PEBIFDJM_03214 7.4e-106 yvdT K Transcriptional regulator
PEBIFDJM_03215 1.8e-295 yveA E amino acid
PEBIFDJM_03216 0.0 levB 3.2.1.26, 3.2.1.64, 3.2.1.65, 3.2.1.80 GH32 G Belongs to the glycosyl hydrolase 32 family
PEBIFDJM_03217 1.2e-274 sacB 2.4.1.10 GH68 M levansucrase activity
PEBIFDJM_03218 7.9e-260 pbpE V Beta-lactamase
PEBIFDJM_03219 2.2e-125 racX 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PEBIFDJM_03220 2.1e-71 MA20_18690 S Protein of unknown function (DUF3237)
PEBIFDJM_03221 6.6e-92 padC Q Phenolic acid decarboxylase
PEBIFDJM_03223 8.5e-284 pnbA CE10 I Belongs to the type-B carboxylesterase lipase family
PEBIFDJM_03224 6.3e-76 slr K transcriptional
PEBIFDJM_03225 4e-122 ywqC M biosynthesis protein
PEBIFDJM_03226 1e-114 epsB 2.7.10.2 D COG0489 ATPases involved in chromosome partitioning
PEBIFDJM_03227 0.0 pglF 4.2.1.115, 4.2.1.135, 4.2.1.46 GM Polysaccharide biosynthesis protein
PEBIFDJM_03228 1.2e-219 epsD GT4 M Glycosyl transferase 4-like
PEBIFDJM_03229 4.5e-157 epsE GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
PEBIFDJM_03230 1.3e-215 epsF GT4 M Glycosyl transferases group 1
PEBIFDJM_03231 1.1e-206 epsG S EpsG family
PEBIFDJM_03232 5.2e-195 epsH GT2 S Glycosyltransferase like family 2
PEBIFDJM_03233 4.4e-205 epsI GM pyruvyl transferase
PEBIFDJM_03234 2.2e-193 epsJ GT2 S COG0463 Glycosyltransferases involved in cell wall biogenesis
PEBIFDJM_03235 3.5e-256 pglK S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PEBIFDJM_03236 2.4e-107 epsL M COG2148 Sugar transferases involved in lipopolysaccharide synthesis
PEBIFDJM_03237 2.1e-56 epsM GM COG0110 Acetyltransferase (isoleucine patch superfamily)
PEBIFDJM_03238 1.6e-221 epsN 2.6.1.102 E Belongs to the DegT DnrJ EryC1 family
PEBIFDJM_03239 1.4e-186 yvfF GM Exopolysaccharide biosynthesis protein
PEBIFDJM_03240 1e-31 yvfG S YvfG protein
PEBIFDJM_03241 2e-239 rpoN K COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog
PEBIFDJM_03242 3.7e-307 yvfH C L-lactate permease
PEBIFDJM_03243 1e-112 yvfI K COG2186 Transcriptional regulators
PEBIFDJM_03244 1.8e-184 lacR K Transcriptional regulator
PEBIFDJM_03245 2.3e-229 cycB G COG2182 Maltose-binding periplasmic proteins domains
PEBIFDJM_03246 1.1e-231 malC P COG1175 ABC-type sugar transport systems, permease components
PEBIFDJM_03247 7.2e-150 ganQ P transport
PEBIFDJM_03248 0.0 lacA 3.2.1.23 G beta-galactosidase
PEBIFDJM_03249 1e-248 galA 3.2.1.89 G arabinogalactan
PEBIFDJM_03250 7.7e-198 rsbU 3.1.3.3 T response regulator
PEBIFDJM_03251 2.6e-157 rsbQ S Alpha/beta hydrolase family
PEBIFDJM_03252 6.8e-159 yvfR V COG1131 ABC-type multidrug transport system, ATPase component
PEBIFDJM_03253 9.9e-132 yvfS V COG0842 ABC-type multidrug transport system, permease component
PEBIFDJM_03254 1.3e-196 desK 2.7.13.3 T Histidine kinase
PEBIFDJM_03255 1e-105 desR T COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PEBIFDJM_03256 6.5e-136 lutA C Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
PEBIFDJM_03257 3.9e-273 lutB C Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate
PEBIFDJM_03258 6.5e-128 lutC S Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source
PEBIFDJM_03259 8.9e-179 yvbX S Glycosyl hydrolase
PEBIFDJM_03260 1.1e-240 yvbW E COG1113 Gamma-aminobutyrate permease and related permeases
PEBIFDJM_03261 7.2e-156 yvbV EG EamA-like transporter family
PEBIFDJM_03262 5.1e-159 yvbU K Transcriptional regulator
PEBIFDJM_03263 1.5e-191 yvbT C COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
PEBIFDJM_03264 2.1e-202 araR K transcriptional
PEBIFDJM_03265 6.2e-252 araE EGP Major facilitator Superfamily
PEBIFDJM_03266 6.3e-185 cggR K COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain
PEBIFDJM_03267 6.2e-185 gapA 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
PEBIFDJM_03268 1e-218 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
PEBIFDJM_03269 4.3e-138 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
PEBIFDJM_03270 3.7e-298 gpmI 5.4.2.12 G Catalyzes the interconversion of 2-phosphoglycerate and
PEBIFDJM_03271 8.4e-243 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
PEBIFDJM_03272 7.7e-82 yvbK 3.1.3.25 K acetyltransferase
PEBIFDJM_03273 0.0 tcaA S response to antibiotic
PEBIFDJM_03274 8e-123 exoY M Membrane
PEBIFDJM_03275 6.2e-111 yvbH S YvbH-like oligomerisation region
PEBIFDJM_03276 1.9e-102 yvbG U UPF0056 membrane protein
PEBIFDJM_03277 1.4e-98 yvbF K Belongs to the GbsR family
PEBIFDJM_03278 1.3e-210 opuCA 3.6.3.32 E COG1125 ABC-type proline glycine betaine transport systems, ATPase components
PEBIFDJM_03279 7.8e-112 opuCB P COG1174 ABC-type proline glycine betaine transport systems, permease component
PEBIFDJM_03280 9.4e-172 opuCC M COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PEBIFDJM_03281 1.1e-105 opuCD P COG1174 ABC-type proline glycine betaine transport systems, permease component
PEBIFDJM_03282 7.4e-60 yvbF K Belongs to the GbsR family
PEBIFDJM_03283 1.4e-209 opuCA 3.6.3.32 E COG1125 ABC-type proline glycine betaine transport systems, ATPase components
PEBIFDJM_03284 5.6e-110 opuCB P COG1174 ABC-type proline glycine betaine transport systems, permease component
PEBIFDJM_03285 2.5e-172 opuCC M COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
PEBIFDJM_03286 5.8e-110 opuCD P COG1174 ABC-type proline glycine betaine transport systems, permease component
PEBIFDJM_03287 9.1e-213 NT chemotaxis protein
PEBIFDJM_03288 2.2e-54 yodB K transcriptional
PEBIFDJM_03289 1.2e-68 yvaO K Cro/C1-type HTH DNA-binding domain
PEBIFDJM_03290 4.4e-68 K transcriptional
PEBIFDJM_03291 7.5e-36 yvzC K Transcriptional
PEBIFDJM_03292 3.4e-151 yvaM S Serine aminopeptidase, S33
PEBIFDJM_03293 2.4e-23 secG U Preprotein translocase subunit SecG
PEBIFDJM_03294 5.6e-143 est 3.1.1.1 S Carboxylesterase
PEBIFDJM_03295 0.0 rnr K 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
PEBIFDJM_03296 1.6e-82 smpB O Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
PEBIFDJM_03298 9.1e-131 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PEBIFDJM_03299 2.7e-97 K Bacterial regulatory proteins, tetR family
PEBIFDJM_03300 2.4e-54 yvaE P Small Multidrug Resistance protein
PEBIFDJM_03301 5.7e-73 yvaD S Family of unknown function (DUF5360)
PEBIFDJM_03302 0.0 yvaC S Fusaric acid resistance protein-like
PEBIFDJM_03303 2.4e-118 azoR I Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
PEBIFDJM_03304 2.8e-196 yvaA 1.1.1.371 S Oxidoreductase
PEBIFDJM_03305 2.2e-48 csoR S transcriptional
PEBIFDJM_03306 5.9e-29 copZ P Copper resistance protein CopZ
PEBIFDJM_03307 0.0 copA 3.6.3.54 P P-type ATPase
PEBIFDJM_03308 0.0 cadA 3.6.3.3, 3.6.3.5 P COG2217 Cation transport ATPase
PEBIFDJM_03309 1.6e-104 bdbD O Thioredoxin
PEBIFDJM_03310 6.5e-72 bdbC O Required for disulfide bond formation in some proteins
PEBIFDJM_03311 4.1e-107 yvgT S membrane
PEBIFDJM_03312 0.0 helD 3.6.4.12 L DNA helicase
PEBIFDJM_03313 0.0 cysJ 1.8.1.2 P Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
PEBIFDJM_03314 0.0 cysI 1.7.7.1, 1.8.1.2, 1.8.7.1 P Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate
PEBIFDJM_03315 0.0 yjcE P COG0025 NhaP-type Na H and K H antiporters
PEBIFDJM_03316 2.1e-85 yvgO
PEBIFDJM_03317 1.1e-155 yvgN S reductase
PEBIFDJM_03318 4e-119 modB P COG4149 ABC-type molybdate transport system, permease component
PEBIFDJM_03319 6e-135 modA P COG0725 ABC-type molybdate transport system, periplasmic component
PEBIFDJM_03320 2.9e-168 yvgK P COG1910 Periplasmic molybdate-binding protein domain
PEBIFDJM_03321 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
PEBIFDJM_03322 1e-84 yvsG S LexA-binding, inner membrane-associated putative hydrolase
PEBIFDJM_03323 6.5e-16 S Small spore protein J (Spore_SspJ)
PEBIFDJM_03324 4.9e-236 yvsH E Arginine ornithine antiporter
PEBIFDJM_03325 2.6e-177 fhuD P ABC transporter
PEBIFDJM_03326 7.9e-183 fhuB P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PEBIFDJM_03327 5.5e-173 fhuG P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PEBIFDJM_03328 1.4e-147 fhuC 3.6.3.34 HP ABC transporter
PEBIFDJM_03329 4.2e-172 M Efflux transporter rnd family, mfp subunit
PEBIFDJM_03330 6e-123 macB V ABC transporter, ATP-binding protein
PEBIFDJM_03331 5.3e-210 yvrN V COG0577 ABC-type antimicrobial peptide transport system, permease component
PEBIFDJM_03332 1.3e-64 yvrL S Regulatory protein YrvL
PEBIFDJM_03333 1.1e-228 oxdC 4.1.1.2 G Oxalate decarboxylase
PEBIFDJM_03334 2.4e-19 S YvrJ protein family
PEBIFDJM_03335 9.5e-98 yvrI K RNA polymerase
PEBIFDJM_03336 7.2e-23
PEBIFDJM_03337 2.8e-131 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PEBIFDJM_03338 0.0 T PhoQ Sensor
PEBIFDJM_03339 1.5e-171 yvrE G SMP-30/Gluconolaconase/LRE-like region
PEBIFDJM_03340 1.4e-139 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PEBIFDJM_03341 8.4e-168 yvrC P COG0614 ABC-type Fe3 -hydroxamate transport system, periplasmic component
PEBIFDJM_03342 1.6e-183 btuC P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PEBIFDJM_03343 1.8e-240 yvrA 3.6.3.34 HP COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components
PEBIFDJM_03344 1.4e-101 yvqK 2.5.1.17 S Adenosyltransferase
PEBIFDJM_03345 7e-226 yvqJ EGP Major facilitator Superfamily
PEBIFDJM_03346 7.3e-62 liaI S membrane
PEBIFDJM_03347 9.5e-105 liaH KT COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription
PEBIFDJM_03348 1.1e-118 liaG S Putative adhesin
PEBIFDJM_03349 1.2e-126 yvqF S Cell wall-active antibiotics response 4TMS YvqF
PEBIFDJM_03350 1.6e-186 vraS 2.7.13.3 T Histidine kinase
PEBIFDJM_03351 3e-108 vraR KT COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PEBIFDJM_03352 1.1e-182 gerAC S Spore germination B3/ GerAC like, C-terminal
PEBIFDJM_03353 1.3e-196 gerAB E Spore germination protein
PEBIFDJM_03354 3.1e-246 gerAA EG Spore germination protein
PEBIFDJM_03355 2.3e-24 S Protein of unknown function (DUF3970)
PEBIFDJM_03356 7.3e-261 fumC 1.1.1.38, 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
PEBIFDJM_03357 1.3e-157 yuxN K Transcriptional regulator
PEBIFDJM_03358 4.3e-250 cssS 2.7.13.3 T PhoQ Sensor
PEBIFDJM_03359 3.4e-126 T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
PEBIFDJM_03360 3.1e-235 htrA 3.4.21.107 O COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
PEBIFDJM_03361 2.7e-79 dps P Ferritin-like domain
PEBIFDJM_03362 8.9e-153 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PEBIFDJM_03363 2.5e-301 pepF2 E COG1164 Oligoendopeptidase F
PEBIFDJM_03364 2.5e-66 S YusW-like protein
PEBIFDJM_03365 1e-153 yusV 3.6.3.34 HP ABC transporter
PEBIFDJM_03366 3.8e-47 yusU S Protein of unknown function (DUF2573)
PEBIFDJM_03367 5.7e-158 yusT K LysR substrate binding domain
PEBIFDJM_03368 1.3e-107 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PEBIFDJM_03369 1.3e-63 yusQ S Tautomerase enzyme
PEBIFDJM_03370 9.4e-292 yusP P Major facilitator superfamily
PEBIFDJM_03371 4.6e-74 yusO K Iron dependent repressor, N-terminal DNA binding domain
PEBIFDJM_03372 3.2e-53 yusN M Coat F domain
PEBIFDJM_03373 5.1e-40
PEBIFDJM_03374 6e-163 fadM E Proline dehydrogenase
PEBIFDJM_03375 4e-08 S YuzL-like protein
PEBIFDJM_03376 0.0 fadB 1.1.1.35, 4.2.1.17, 5.1.2.3 I 3-hydroxyacyl-CoA dehydrogenase
PEBIFDJM_03377 1.4e-217 fadA 2.3.1.16 I Belongs to the thiolase family
PEBIFDJM_03378 0.0 fadE 1.3.8.1 I acyl-CoA dehydrogenase
PEBIFDJM_03379 2.8e-63 arsC 1.20.4.1 P Belongs to the ArsC family
PEBIFDJM_03380 9.3e-65 gcvH E Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate
PEBIFDJM_03381 1.1e-39 yusG S Protein of unknown function (DUF2553)
PEBIFDJM_03382 2.1e-73 rnmV 3.1.26.8 L COG1658 Small primase-like proteins (Toprim domain)
PEBIFDJM_03383 1.2e-54 traF CO Thioredoxin
PEBIFDJM_03384 2.4e-56 yusD S SCP-2 sterol transfer family
PEBIFDJM_03385 4.8e-185 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
PEBIFDJM_03386 1.4e-95 metI P COG2011 ABC-type metal ion transport system, permease component
PEBIFDJM_03387 1.9e-147 metQ P Belongs to the NlpA lipoprotein family
PEBIFDJM_03388 2.4e-62 yurZ 2.3.1.12, 4.1.1.44 S Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
PEBIFDJM_03389 2.3e-142 sufC O COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component
PEBIFDJM_03390 1.4e-245 sufD O assembly protein SufD
PEBIFDJM_03391 9.4e-236 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
PEBIFDJM_03392 1.4e-77 nifU C COG0822 NifU homolog involved in Fe-S cluster formation
PEBIFDJM_03393 3.5e-271 sufB O FeS cluster assembly
PEBIFDJM_03394 1.3e-63 yurT E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PEBIFDJM_03395 1e-41
PEBIFDJM_03397 4.9e-207 yurR 1.4.5.1 E COG0665 Glycine D-amino acid oxidases (deaminating)
PEBIFDJM_03398 2.8e-66 yurQ 2.7.7.7 L COG0322 Nuclease subunit of the excinuclease complex
PEBIFDJM_03399 8.8e-184 frlB M Catalyzes the conversion of a range of fructosamine 6- phosphates to glucose 6-phosphate and a free amino acid
PEBIFDJM_03400 1.2e-238 yurO G COG1653 ABC-type sugar transport system, periplasmic component
PEBIFDJM_03401 5.3e-156 yurN G Binding-protein-dependent transport system inner membrane component
PEBIFDJM_03402 8.1e-168 yurM P COG0395 ABC-type sugar transport system, permease component
PEBIFDJM_03403 1.5e-163 yurL 2.7.1.218 G pfkB family carbohydrate kinase
PEBIFDJM_03404 3.3e-135 yurK K UTRA
PEBIFDJM_03405 6.5e-204 msmX P Belongs to the ABC transporter superfamily
PEBIFDJM_03406 5.6e-158 gntR9 K COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
PEBIFDJM_03407 4.6e-73 azlC E AzlC protein
PEBIFDJM_03408 1.5e-23 S branched-chain amino acid
PEBIFDJM_03409 7e-169 bsn L Ribonuclease
PEBIFDJM_03410 1.7e-232 pucF 3.5.1.6, 3.5.1.87, 3.5.3.9 E COG0624 Acetylornithine deacetylase Succinyl-diaminopimelate desuccinylase and related deacylases
PEBIFDJM_03411 8.7e-237 pucG 2.6.1.112, 2.6.1.44, 2.6.1.45, 2.6.1.51 E COG0075 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase
PEBIFDJM_03412 4e-184 pucA 1.17.1.4 O COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
PEBIFDJM_03413 2.6e-109 pucB 1.1.1.328, 1.17.1.4, 2.7.7.76 S MobA-like NTP transferase domain
PEBIFDJM_03414 1.4e-145 ygfM 1.17.1.4, 1.2.5.3 C COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM CutM homologs
PEBIFDJM_03415 0.0 xdhA 1.17.1.4 C COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs
PEBIFDJM_03416 1.8e-95 1.17.1.4, 1.2.5.3, 1.3.99.16 C COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs
PEBIFDJM_03417 1.9e-56 uraH 3.5.2.17, 4.1.1.97 S Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily
PEBIFDJM_03418 3.2e-278 uraD 1.7.3.3, 3.5.1.41, 4.1.1.97 Q Catalyzes the oxidation of uric acid to 5- hydroxyisourate, which is further processed to form (S)-allantoin
PEBIFDJM_03419 6.9e-221 pbuX F xanthine
PEBIFDJM_03420 5.7e-234 pbuX F Permease family
PEBIFDJM_03421 2.4e-300 pucR QT COG2508 Regulator of polyketide synthase expression
PEBIFDJM_03422 6.6e-259 allB 3.5.2.5 F Catalyzes the conversion of allantoin (5- ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring
PEBIFDJM_03423 2.4e-59 yunG
PEBIFDJM_03424 4.3e-171 yunF S Protein of unknown function DUF72
PEBIFDJM_03425 2e-141 yunE S membrane transporter protein
PEBIFDJM_03426 3.2e-264 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
PEBIFDJM_03427 1.1e-47 yunC S Domain of unknown function (DUF1805)
PEBIFDJM_03428 1e-131 yunB S Sporulation protein YunB (Spo_YunB)
PEBIFDJM_03429 4.5e-196 lytH M Peptidase, M23
PEBIFDJM_03430 1e-167 lipA 2.8.1.8 H Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
PEBIFDJM_03431 2.7e-109 yutC S Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
PEBIFDJM_03432 9.7e-48 yutD S protein conserved in bacteria
PEBIFDJM_03433 8.6e-75 yutE S Protein of unknown function DUF86
PEBIFDJM_03434 4.2e-141 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
PEBIFDJM_03435 2.5e-77 pgpA 3.1.3.27 I COG1267 Phosphatidylglycerophosphatase A and related proteins
PEBIFDJM_03436 2.9e-198 yutH S Spore coat protein
PEBIFDJM_03437 2.7e-241 hom 1.1.1.3 E homoserine dehydrogenase
PEBIFDJM_03438 2.3e-198 thrC 4.2.3.1 E Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
PEBIFDJM_03439 1.9e-172 thrB 2.7.1.39 E Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
PEBIFDJM_03440 0.0 yuxL 3.4.14.5, 3.4.19.1 EU peptidase
PEBIFDJM_03441 1.2e-35 yutI O COG0694 Thioredoxin-like proteins and domains
PEBIFDJM_03442 8.7e-56 yuzD S protein conserved in bacteria
PEBIFDJM_03443 2e-199 yutJ 1.6.99.3 C NADH dehydrogenase
PEBIFDJM_03444 3.2e-39 yuzB S Belongs to the UPF0349 family
PEBIFDJM_03445 5.3e-199 yutK F Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
PEBIFDJM_03446 6.3e-162 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
PEBIFDJM_03447 7e-62 erpA S Belongs to the HesB IscA family
PEBIFDJM_03448 1.4e-71 paiA 2.3.1.57 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
PEBIFDJM_03449 3.2e-115 paiB K Putative FMN-binding domain
PEBIFDJM_03450 6e-185 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
PEBIFDJM_03452 1.7e-187 yumC 1.18.1.2, 1.19.1.1 C reductase
PEBIFDJM_03453 2.5e-236 yumB 1.6.99.3 C NADH dehydrogenase
PEBIFDJM_03454 8.4e-27 yuiB S Putative membrane protein
PEBIFDJM_03455 8e-117 yuiC S protein conserved in bacteria
PEBIFDJM_03456 1.2e-77 yuiD S protein conserved in bacteria
PEBIFDJM_03457 8.4e-279 pepA 3.4.11.1, 3.4.11.5 E Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
PEBIFDJM_03458 3.9e-211 yuiF S antiporter
PEBIFDJM_03459 4.4e-93 bioY S Biotin biosynthesis protein
PEBIFDJM_03460 5.8e-122 yuiH S Oxidoreductase molybdopterin binding domain
PEBIFDJM_03461 1.5e-166 besA S Putative esterase
PEBIFDJM_03462 3.6e-140 IQ Belongs to the short-chain dehydrogenases reductases (SDR) family
PEBIFDJM_03463 1.2e-224 entC 5.4.4.2 HQ Isochorismate synthase
PEBIFDJM_03464 0.0 entE 2.7.7.58, 6.3.2.14 Q 2,3-dihydroxybenzoate-AMP ligase
PEBIFDJM_03465 1.4e-178 entB 3.3.2.1, 6.3.2.14 Q Isochorismatase family
PEBIFDJM_03466 0.0 dhbF Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PEBIFDJM_03467 8.5e-36 mbtH S MbtH-like protein
PEBIFDJM_03468 4.1e-132 yukJ S Uncharacterized conserved protein (DUF2278)
PEBIFDJM_03469 6.1e-205 ald 1.4.1.1 E Belongs to the AlaDH PNT family
PEBIFDJM_03470 6.5e-229 yukF QT Transcriptional regulator
PEBIFDJM_03471 2.8e-45 esxA S Belongs to the WXG100 family
PEBIFDJM_03472 7.7e-41 yukD S WXG100 protein secretion system (Wss), protein YukD
PEBIFDJM_03473 6.8e-211 essB S WXG100 protein secretion system (Wss), protein YukC
PEBIFDJM_03474 0.0 essC D COG1674 DNA segregation ATPase FtsK SpoIIIE and related proteins
PEBIFDJM_03475 0.0 esaA S type VII secretion protein EsaA
PEBIFDJM_03476 3.3e-64 yueC S Family of unknown function (DUF5383)
PEBIFDJM_03477 6.4e-131 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PEBIFDJM_03478 4.8e-96 yueE S phosphohydrolase
PEBIFDJM_03479 2.9e-24 S Protein of unknown function (DUF2642)
PEBIFDJM_03480 5.2e-71 S Protein of unknown function (DUF2283)
PEBIFDJM_03481 3.2e-190 yueF S transporter activity
PEBIFDJM_03482 6.6e-31 yueG S Spore germination protein gerPA/gerPF
PEBIFDJM_03483 3.1e-37 yueH S YueH-like protein
PEBIFDJM_03484 1.8e-66 yueI S Protein of unknown function (DUF1694)
PEBIFDJM_03485 9.5e-103 pncA Q COG1335 Amidases related to nicotinamidase
PEBIFDJM_03486 3.6e-266 pncB 6.3.4.21 H Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
PEBIFDJM_03487 5.4e-231 yuxH 3.1.4.52 T signal transduction protein containing EAL and modified HD-GYP domains
PEBIFDJM_03488 1.1e-22 yuzC
PEBIFDJM_03490 2.5e-162 comQ H Polyprenyl synthetase
PEBIFDJM_03492 0.0 comP 2.7.13.3 T Histidine kinase
PEBIFDJM_03493 5.1e-116 comA K COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
PEBIFDJM_03494 1.8e-63 ydiI Q protein, possibly involved in aromatic compounds catabolism
PEBIFDJM_03495 5.7e-59 phaG P COG1320 Multisubunit Na H antiporter, MnhG subunit
PEBIFDJM_03496 7.2e-38 phaF P Subunit F of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PEBIFDJM_03497 1.1e-78 mrpE P Subunit E of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PEBIFDJM_03498 1.1e-262 mrpD CP Subunit D of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PEBIFDJM_03499 1.5e-50 phaC 1.6.5.3 P Subunit C of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PEBIFDJM_03500 5.4e-69 mrpB P Subunit B of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali
PEBIFDJM_03501 0.0 phaA 1.6.5.3 CP COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit
PEBIFDJM_03502 2.1e-13
PEBIFDJM_03503 1.3e-233 maeN C COG3493 Na citrate symporter
PEBIFDJM_03504 1.9e-167 yufQ S Belongs to the binding-protein-dependent transport system permease family
PEBIFDJM_03505 1.4e-184 yufP S Belongs to the binding-protein-dependent transport system permease family
PEBIFDJM_03506 2.7e-272 xylG 3.6.3.17 S ABC transporter, ATP-binding protein
PEBIFDJM_03507 4.2e-192 tcsA S ABC-type transport system, periplasmic component surface lipoprotein
PEBIFDJM_03508 3.9e-125 dcuR T COG4565 Response regulator of citrate malate metabolism
PEBIFDJM_03509 9.9e-294 dcuS 2.7.13.3 T Signal transduction histidine kinase regulating citrate malate metabolism
PEBIFDJM_03510 6.3e-78 yufK S Family of unknown function (DUF5366)
PEBIFDJM_03511 6.3e-75 yuxK S protein conserved in bacteria
PEBIFDJM_03512 0.0 mrcB 2.4.1.129, 3.4.16.4 GT51 M Penicillin-binding Protein
PEBIFDJM_03513 3.5e-186 yuxJ EGP Major facilitator Superfamily
PEBIFDJM_03515 1.9e-115 kapD L the KinA pathway to sporulation
PEBIFDJM_03516 2e-70 kapB G Kinase associated protein B
PEBIFDJM_03517 1e-232 T PhoQ Sensor
PEBIFDJM_03518 1.2e-227 patB 4.4.1.8 E COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
PEBIFDJM_03519 4.6e-39 yugE S Domain of unknown function (DUF1871)
PEBIFDJM_03520 2.2e-156 yugF I Hydrolase
PEBIFDJM_03521 1.6e-85 alaR K Transcriptional regulator
PEBIFDJM_03522 6.2e-199 yugH 2.6.1.1 E Aminotransferase
PEBIFDJM_03523 8.9e-63 yugI 5.3.1.9 J RNA binding protein (contains ribosomal protein S1 domain)
PEBIFDJM_03524 1.1e-34 yuzA S Domain of unknown function (DUF378)
PEBIFDJM_03525 2.6e-227 yugJ C oxidoreductases, Fe-dependent alcohol dehydrogenase family
PEBIFDJM_03526 2.8e-229 yugK C Dehydrogenase
PEBIFDJM_03527 4.2e-261 pgi 5.3.1.9 G Belongs to the GPI family
PEBIFDJM_03529 1.3e-72 yugN S YugN-like family
PEBIFDJM_03530 2.2e-182 yugO P COG1226 Kef-type K transport systems
PEBIFDJM_03531 1.1e-53 mstX S Membrane-integrating protein Mistic
PEBIFDJM_03532 4.6e-39
PEBIFDJM_03533 1.4e-116 yugP S Zn-dependent protease
PEBIFDJM_03534 8.4e-235 yugS S COG1253 Hemolysins and related proteins containing CBS domains
PEBIFDJM_03535 0.0 yugT 3.2.1.10, 3.2.1.20 GH13,GH31 G COG0366 Glycosidases
PEBIFDJM_03536 2.1e-72 yugU S Uncharacterised protein family UPF0047
PEBIFDJM_03537 6.7e-35
PEBIFDJM_03538 9.9e-140 tgl 2.3.2.13 S protein-glutamine gamma-glutamyltransferase activity
PEBIFDJM_03539 3.2e-225 mcpA NT chemotaxis protein
PEBIFDJM_03540 1.1e-217 mcpA NT chemotaxis protein
PEBIFDJM_03541 8.5e-295 mcpA NT chemotaxis protein
PEBIFDJM_03542 2.1e-237 mcpA NT chemotaxis protein
PEBIFDJM_03544 0.0 rhaD 1.1.1.1, 4.1.2.19 IQ Class II Aldolase and Adducin N-terminal domain
PEBIFDJM_03545 1e-134 fucR K COG1349 Transcriptional regulators of sugar metabolism
PEBIFDJM_03546 1.5e-272 rhaB 2.7.1.12, 2.7.1.17, 2.7.1.5, 5.3.1.14 G Involved in the catabolism of L-rhamnose (6-deoxy-L- mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1-hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate
PEBIFDJM_03547 1.6e-54 rhaM 5.1.3.32 G Involved in the anomeric conversion of L-rhamnose
PEBIFDJM_03548 1.3e-251 rhaA 2.7.1.5, 5.3.1.14 G Belongs to the rhamnose isomerase family
PEBIFDJM_03549 1.7e-182 ygjR S Oxidoreductase
PEBIFDJM_03550 9.1e-196 yubA S transporter activity
PEBIFDJM_03551 2.7e-133 uppP 3.6.1.27 V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
PEBIFDJM_03553 1.3e-87 cdoA 1.13.11.20 S Cysteine dioxygenase type I
PEBIFDJM_03554 3.7e-274 yubD P Major Facilitator Superfamily
PEBIFDJM_03555 3.2e-152 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
PEBIFDJM_03556 1e-38 yiaA S yiaA/B two helix domain
PEBIFDJM_03557 2.7e-236 ktrB P Potassium
PEBIFDJM_03558 1.9e-121 ktrA P COG0569 K transport systems, NAD-binding component
PEBIFDJM_03559 2.2e-91 yuaB
PEBIFDJM_03560 6.7e-93 yuaC K Belongs to the GbsR family
PEBIFDJM_03561 1e-281 gbsA 1.2.1.8 C Belongs to the aldehyde dehydrogenase family
PEBIFDJM_03562 2.9e-229 gbsB 1.1.1.1 C alcohol dehydrogenase
PEBIFDJM_03563 2.1e-105 yuaD
PEBIFDJM_03564 3.9e-84 yuaE S DinB superfamily
PEBIFDJM_03565 4.2e-76 yuaF OU Membrane protein implicated in regulation of membrane protease activity
PEBIFDJM_03566 4.1e-188 yuaG 3.4.21.72 S protein conserved in bacteria
PEBIFDJM_03567 3.4e-94 M1-753 M FR47-like protein
PEBIFDJM_03568 3.7e-89 thiT S Thiamine transporter protein (Thia_YuaJ)
PEBIFDJM_03569 6.7e-167 ygxA S Nucleotidyltransferase-like
PEBIFDJM_03570 2.1e-55 ygzB S UPF0295 protein
PEBIFDJM_03571 4e-80 perR P Belongs to the Fur family
PEBIFDJM_03572 8.2e-87 bcp 1.11.1.15 O Peroxiredoxin
PEBIFDJM_03573 4e-245 gsaB 5.4.3.8 H Glutamate-1-semialdehyde aminotransferase
PEBIFDJM_03574 8.7e-180 ygaE S Membrane
PEBIFDJM_03575 5.3e-301 ygaD V ABC transporter
PEBIFDJM_03576 1.3e-104 ygaC J Belongs to the UPF0374 family
PEBIFDJM_03577 1.5e-37 ygaB S YgaB-like protein
PEBIFDJM_03578 2.4e-08 sspE S Small, acid-soluble spore protein, gamma-type
PEBIFDJM_03579 2.9e-134 IQ COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
PEBIFDJM_03580 6.9e-36 yfhS
PEBIFDJM_03581 1.1e-210 mutY L A G-specific
PEBIFDJM_03582 1.2e-185 yfhP S membrane-bound metal-dependent
PEBIFDJM_03583 0.0 yfhO S Bacterial membrane protein YfhO
PEBIFDJM_03584 2.7e-185 csbB GT2 M COG0463 Glycosyltransferases involved in cell wall biogenesis
PEBIFDJM_03585 1.1e-169 yfhM S Alpha beta hydrolase
PEBIFDJM_03586 3.5e-51 yfhL S SdpI/YhfL protein family
PEBIFDJM_03587 2.4e-87 batE T Bacterial SH3 domain homologues
PEBIFDJM_03588 2.9e-44 yfhJ S WVELL protein
PEBIFDJM_03589 6.2e-20 sspK S reproduction
PEBIFDJM_03590 2.8e-208 yfhI EGP Major facilitator Superfamily
PEBIFDJM_03591 3.2e-50 yfhH S Protein of unknown function (DUF1811)
PEBIFDJM_03592 5.7e-141 recX 2.4.1.337 GT4 S Modulates RecA activity
PEBIFDJM_03593 1.6e-171 yfhF S nucleoside-diphosphate sugar epimerase
PEBIFDJM_03595 2.1e-25 yfhD S YfhD-like protein
PEBIFDJM_03596 4.4e-106 yfhC C nitroreductase
PEBIFDJM_03597 2.1e-165 yfhB 5.3.3.17 S PhzF family
PEBIFDJM_03598 1.5e-170 yfhA P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PEBIFDJM_03599 4.9e-174 yfiZ P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PEBIFDJM_03600 8.2e-174 yfiY P ABC transporter substrate-binding protein
PEBIFDJM_03601 0.0 mprF 2.3.2.3 S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
PEBIFDJM_03602 4.9e-79 yfiV K transcriptional
PEBIFDJM_03603 1e-282 yfiU EGP Major facilitator Superfamily
PEBIFDJM_03604 2.1e-99 yfiT S Belongs to the metal hydrolase YfiT family
PEBIFDJM_03605 5.3e-218 yfiS EGP Major facilitator Superfamily
PEBIFDJM_03606 3.4e-109 yfiR K Transcriptional regulator
PEBIFDJM_03607 4.2e-187 yfiQ G COG3936 Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
PEBIFDJM_03608 3.6e-74 estA 3.1.1.3 S acetyltransferases and hydrolases with the alpha beta hydrolase fold
PEBIFDJM_03609 1.8e-93 padR K transcriptional
PEBIFDJM_03610 6.9e-204 V COG0842 ABC-type multidrug transport system, permease component
PEBIFDJM_03611 1.5e-209 V ABC-2 family transporter protein
PEBIFDJM_03612 1.9e-167 V ABC transporter, ATP-binding protein
PEBIFDJM_03613 5.4e-113 KT LuxR family transcriptional regulator
PEBIFDJM_03614 3.6e-213 yxjM T Histidine kinase
PEBIFDJM_03616 1.1e-233 S Oxidoreductase
PEBIFDJM_03617 8.4e-184 G Xylose isomerase
PEBIFDJM_03618 1.8e-262 iolT EGP Major facilitator Superfamily
PEBIFDJM_03619 1.1e-167 K AraC-like ligand binding domain
PEBIFDJM_03620 9.7e-163 yfiE 1.13.11.2 S glyoxalase
PEBIFDJM_03621 6.4e-64 mhqP S DoxX
PEBIFDJM_03622 0.0 yfiC V COG1132 ABC-type multidrug transport system, ATPase and permease components
PEBIFDJM_03623 1.4e-306 yfiB3 V ABC transporter
PEBIFDJM_03624 0.0 yobO M COG5434 Endopolygalacturonase
PEBIFDJM_03625 3e-295 glvC 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PEBIFDJM_03626 4.6e-140 glvR K Helix-turn-helix domain, rpiR family
PEBIFDJM_03627 1.1e-261 aglB 3.2.1.122, 3.2.1.22, 3.2.1.86 GH4,GT4 G COG1486 Alpha-galactosidases 6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases
PEBIFDJM_03628 1.9e-14 S Domain of unknown function (DUF5082)
PEBIFDJM_03629 1.7e-12 yxiC S Family of unknown function (DUF5344)
PEBIFDJM_03630 1.8e-74 S LXG domain of WXG superfamily
PEBIFDJM_03632 1.3e-17 S Protein conserved in bacteria
PEBIFDJM_03635 2.6e-44 yfjA S Belongs to the WXG100 family
PEBIFDJM_03636 2.7e-190 yfjB
PEBIFDJM_03637 4.1e-144 yfjC
PEBIFDJM_03638 1.8e-101 yfjD S Family of unknown function (DUF5381)
PEBIFDJM_03639 6.1e-78 S Family of unknown function (DUF5381)
PEBIFDJM_03640 4e-56 yfjF S UPF0060 membrane protein
PEBIFDJM_03641 9.8e-25 sspH S Belongs to the SspH family
PEBIFDJM_03642 0.0 acoR KQ COG3284 Transcriptional activator of acetoin glycerol metabolism
PEBIFDJM_03643 8.6e-254 acoL 1.8.1.4 C COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
PEBIFDJM_03644 7.9e-195 acoC 2.3.1.12, 2.3.1.61 C Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex
PEBIFDJM_03645 2.1e-188 acoB C COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
PEBIFDJM_03646 4.4e-191 acoA C COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
PEBIFDJM_03647 1.7e-29 yfjL
PEBIFDJM_03648 9.6e-85 yfjM S Psort location Cytoplasmic, score
PEBIFDJM_03649 1.5e-188 yfjN J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PEBIFDJM_03650 3.3e-43 S YfzA-like protein
PEBIFDJM_03651 4e-267 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PEBIFDJM_03652 7.2e-166 yfjP 3.2.2.21 L COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
PEBIFDJM_03653 1.7e-184 corA P Mediates influx of magnesium ions
PEBIFDJM_03654 9.5e-150 yfjR 1.1.1.31 I NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
PEBIFDJM_03655 2.6e-154 pdaA G deacetylase
PEBIFDJM_03656 1.1e-26 yfjT
PEBIFDJM_03657 5.4e-222 yfkA S YfkB-like domain
PEBIFDJM_03658 6e-149 yfkC M Mechanosensitive ion channel
PEBIFDJM_03659 1.2e-146 yfkD S YfkD-like protein
PEBIFDJM_03660 6.1e-183 cax P COG0387 Ca2 H antiporter
PEBIFDJM_03661 1.5e-219 ycaD EGP COG0477 Permeases of the major facilitator superfamily
PEBIFDJM_03662 5e-08
PEBIFDJM_03663 1.3e-143 yihY S Belongs to the UPF0761 family
PEBIFDJM_03664 2.4e-50 yfkI S gas vesicle protein
PEBIFDJM_03665 1.2e-82 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
PEBIFDJM_03666 1.3e-28 yfkK S Belongs to the UPF0435 family
PEBIFDJM_03667 5.8e-206 ydiM EGP Major facilitator Superfamily
PEBIFDJM_03668 1.2e-88 yfkM 1.11.1.6, 3.5.1.124 S protease
PEBIFDJM_03669 0.0 cpdB 3.1.3.5, 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
PEBIFDJM_03670 1.6e-125 yfkO C nitroreductase
PEBIFDJM_03671 1.8e-133 treR K transcriptional
PEBIFDJM_03672 0.0 treC 3.2.1.93 GH13 G COG0366 Glycosidases
PEBIFDJM_03673 1.5e-253 treP 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G phosphotransferase system
PEBIFDJM_03674 3.2e-281 yfkQ EG Spore germination protein
PEBIFDJM_03675 5.1e-207 yfkR S spore germination
PEBIFDJM_03677 1.3e-193 E Spore germination protein
PEBIFDJM_03678 6.3e-252 agcS_1 E Sodium alanine symporter
PEBIFDJM_03679 6e-67 yhdN S Domain of unknown function (DUF1992)
PEBIFDJM_03680 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
PEBIFDJM_03681 2e-250 nagE 2.7.1.193, 2.7.1.199, 2.7.1.201, 2.7.1.208, 2.7.1.211 G COG1263 Phosphotransferase system IIC components, glucose maltose N-acetylglucosamine-specific
PEBIFDJM_03682 1.1e-138 map 3.4.11.18 E Methionine aminopeptidase
PEBIFDJM_03683 9.1e-50 yflH S Protein of unknown function (DUF3243)
PEBIFDJM_03684 4.1e-19 yflI
PEBIFDJM_03685 4e-18 yflJ S Protein of unknown function (DUF2639)
PEBIFDJM_03686 9.9e-123 yflK S protein conserved in bacteria
PEBIFDJM_03687 2.9e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
PEBIFDJM_03688 2.8e-215 nos 1.14.14.47 C Belongs to the NOS family. Bacterial NOS oxygenase subfamily
PEBIFDJM_03689 3.5e-151 yflN S COG0491 Zn-dependent hydrolases, including glyoxylases
PEBIFDJM_03690 8.5e-227 citM C Citrate transporter
PEBIFDJM_03691 2.8e-179 yflP S Tripartite tricarboxylate transporter family receptor
PEBIFDJM_03692 2.2e-117 citT T response regulator
PEBIFDJM_03693 4.4e-289 citS 2.7.13.3 T Signal transduction histidine kinase regulating citrate malate metabolism
PEBIFDJM_03694 5.5e-235 yflS P Sodium:sulfate symporter transmembrane region
PEBIFDJM_03695 2.5e-239 pel 4.2.2.10, 4.2.2.2 G Pectate lyase
PEBIFDJM_03696 7.6e-58 yflT S Heat induced stress protein YflT
PEBIFDJM_03697 2.6e-24 S Protein of unknown function (DUF3212)
PEBIFDJM_03698 1.2e-166 fecB P COG4594 ABC-type Fe3 -citrate transport system, periplasmic component
PEBIFDJM_03699 4.7e-169 viuD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PEBIFDJM_03700 1.2e-169 fecD P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
PEBIFDJM_03701 1.1e-149 yfmF 3.6.3.34 P ATPases associated with a variety of cellular activities
PEBIFDJM_03702 3e-187 yfmJ S N-terminal domain of oxidoreductase
PEBIFDJM_03703 8.5e-78 yfmK 2.3.1.128 K acetyltransferase
PEBIFDJM_03704 5e-199 yfmL 3.6.4.13 L COG0513 Superfamily II DNA and RNA helicases
PEBIFDJM_03705 3.5e-296 yfmM S COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PEBIFDJM_03708 1.5e-209 yfmO EGP Major facilitator Superfamily
PEBIFDJM_03709 1.4e-69 yfmP K transcriptional
PEBIFDJM_03710 1.1e-72 yfmQ S Uncharacterised protein from bacillus cereus group
PEBIFDJM_03711 0.0 yfmR S COG0488 ATPase components of ABC transporters with duplicated ATPase domains
PEBIFDJM_03712 1.1e-113 yfmS NT chemotaxis protein
PEBIFDJM_03713 3.7e-279 yfmT 1.2.1.3, 1.2.1.67 C Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively
PEBIFDJM_03714 1.4e-240 yfnA E amino acid
PEBIFDJM_03715 8.1e-131 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
PEBIFDJM_03716 4.6e-206 fsr P COG0477 Permeases of the major facilitator superfamily
PEBIFDJM_03717 1e-189 yfnD M Nucleotide-diphospho-sugar transferase
PEBIFDJM_03718 2.3e-223 yfnE 2.4.1.338 GT2 S Glycosyltransferase like family 2
PEBIFDJM_03719 2.4e-180 yfnF M Nucleotide-diphospho-sugar transferase
PEBIFDJM_03720 7.1e-172 yfnG 4.2.1.45 M dehydratase
PEBIFDJM_03721 1e-147 rfbF 2.7.7.33 JM Nucleotidyl transferase
PEBIFDJM_03722 0.0 ltaS 2.7.8.20 M Belongs to the LTA synthase family
PEBIFDJM_03723 0.0 cypD 1.14.14.1, 1.6.2.4 C Belongs to the cytochrome P450 family
PEBIFDJM_03724 3.6e-199 yetN S Protein of unknown function (DUF3900)
PEBIFDJM_03725 5.2e-209 yetM CH FAD binding domain
PEBIFDJM_03726 6.4e-90 yetL K helix_turn_helix multiple antibiotic resistance protein
PEBIFDJM_03727 2.3e-157 yetK EG EamA-like transporter family
PEBIFDJM_03728 9.1e-105 yetJ S Belongs to the BI1 family
PEBIFDJM_03729 8.9e-20 yezD S Uncharacterized small protein (DUF2292)
PEBIFDJM_03730 3.2e-145 T COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
PEBIFDJM_03731 2.2e-34
PEBIFDJM_03732 2e-64 yetH E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PEBIFDJM_03733 3.7e-54 isdI 1.14.99.48, 1.14.99.57 S Antibiotic biosynthesis monooxygenase
PEBIFDJM_03734 8.8e-122 yetF S membrane
PEBIFDJM_03735 4.2e-253 lplD 3.2.1.122, 3.2.1.22, 3.2.1.86 GH4,GT4 G Family 4 glycosyl hydrolase
PEBIFDJM_03736 1.7e-162 lplC G Binding-protein-dependent transport system inner membrane component
PEBIFDJM_03737 3.2e-175 lplB G COG4209 ABC-type polysaccharide transport system, permease component
PEBIFDJM_03738 1.3e-284 lplA G Bacterial extracellular solute-binding protein
PEBIFDJM_03739 0.0 yetA
PEBIFDJM_03740 0.0 yesZ 3.2.1.23 G beta-galactosidase activity
PEBIFDJM_03741 7.5e-123 yesY E GDSL-like Lipase/Acylhydrolase
PEBIFDJM_03742 0.0 yesX 4.2.2.23, 4.2.2.24 PL11 E cell wall organization
PEBIFDJM_03743 0.0 yesX 4.2.2.23, 4.2.2.24 PL11 E cell wall organization
PEBIFDJM_03744 2.4e-110 yesV S Protein of unknown function, DUF624
PEBIFDJM_03745 6e-128 yesU S Domain of unknown function (DUF1961)
PEBIFDJM_03746 1e-130 E GDSL-like Lipase/Acylhydrolase
PEBIFDJM_03747 0.0 yesS K Transcriptional regulator
PEBIFDJM_03748 1e-198 3.2.1.172 GH105 S Glycosyl Hydrolase Family 88
PEBIFDJM_03749 4.1e-164 yesQ P Binding-protein-dependent transport system inner membrane component
PEBIFDJM_03750 2.8e-171 yesP G Binding-protein-dependent transport system inner membrane component
PEBIFDJM_03751 3.6e-246 yesO G Bacterial extracellular solute-binding protein
PEBIFDJM_03752 4.7e-202 yesN K helix_turn_helix, arabinose operon control protein
PEBIFDJM_03753 0.0 yesM 2.7.13.3 T Histidine kinase
PEBIFDJM_03754 7.7e-101 yesL S Protein of unknown function, DUF624
PEBIFDJM_03756 6e-102 yesJ K Acetyltransferase (GNAT) family
PEBIFDJM_03757 5.2e-104 cotJC P Spore Coat
PEBIFDJM_03758 1.5e-45 cotJB S CotJB protein
PEBIFDJM_03759 5.3e-45 cotJA S Spore coat associated protein JA (CotJA)
PEBIFDJM_03760 2.4e-153 yesF GM NAD(P)H-binding
PEBIFDJM_03761 9.7e-82 yesE S SnoaL-like domain
PEBIFDJM_03762 1.2e-103 dhaR3 K Transcriptional regulator
PEBIFDJM_03764 9.4e-127 yeeN K transcriptional regulatory protein
PEBIFDJM_03766 2.1e-213 S Tetratricopeptide repeat
PEBIFDJM_03767 9.7e-49
PEBIFDJM_03768 7e-26 3.4.24.40 CO amine dehydrogenase activity
PEBIFDJM_03769 2e-128 3.4.24.40 CO amine dehydrogenase activity
PEBIFDJM_03771 2.5e-100 L endonuclease activity
PEBIFDJM_03773 0.0 L nucleic acid phosphodiester bond hydrolysis
PEBIFDJM_03774 1.6e-82 S Protein of unknown function, DUF600
PEBIFDJM_03775 6.2e-31 S Colicin immunity protein / pyocin immunity protein
PEBIFDJM_03777 4.1e-100 S response regulator aspartate phosphatase
PEBIFDJM_03779 0.0 K SIR2-like domain
PEBIFDJM_03780 5e-20
PEBIFDJM_03781 1.1e-248 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
PEBIFDJM_03782 3e-170 yegS 2.7.1.107 I COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
PEBIFDJM_03783 0.0 swrC V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
PEBIFDJM_03784 1.3e-148 yerO K Transcriptional regulator
PEBIFDJM_03785 3.1e-270 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PEBIFDJM_03786 1.2e-274 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
PEBIFDJM_03787 2.1e-45 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
PEBIFDJM_03788 1.3e-263 putP E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
PEBIFDJM_03789 1.6e-123 sapB S MgtC SapB transporter
PEBIFDJM_03790 1e-195 yerI S homoserine kinase type II (protein kinase fold)
PEBIFDJM_03791 3e-218 camS S COG4851 Protein involved in sex pheromone biosynthesis
PEBIFDJM_03792 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
PEBIFDJM_03793 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
PEBIFDJM_03794 1.1e-124 pcrB I 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
PEBIFDJM_03795 8.8e-303 yerD 1.4.7.1 E Belongs to the glutamate synthase family
PEBIFDJM_03796 4.8e-51 yerC S protein conserved in bacteria
PEBIFDJM_03797 1.1e-189 yerB S Protein of unknown function (DUF3048) C-terminal domain
PEBIFDJM_03798 0.0 yerA 3.5.4.2 F adenine deaminase
PEBIFDJM_03799 5.4e-28 S Protein of unknown function (DUF2892)
PEBIFDJM_03800 2.7e-225 yjeH E Amino acid permease
PEBIFDJM_03801 1e-72 K helix_turn_helix ASNC type
PEBIFDJM_03802 1.1e-234 purD 6.3.4.13 F Belongs to the GARS family
PEBIFDJM_03803 6.6e-287 purH 2.1.2.3, 3.5.4.10 F Bifunctional purine biosynthesis protein PurH
PEBIFDJM_03804 2.8e-105 purN 2.1.2.2 F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
PEBIFDJM_03805 3.8e-177 purM 6.3.3.1, 6.3.4.13 F Phosphoribosylformylglycinamidine cyclo-ligase
PEBIFDJM_03806 1.2e-271 purF 2.4.2.14 F Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
PEBIFDJM_03807 0.0 purL 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PEBIFDJM_03808 3.3e-129 purQ 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PEBIFDJM_03809 2.9e-38 purS 6.3.2.6, 6.3.5.3 F Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
PEBIFDJM_03810 4.1e-130 purC 4.1.1.21, 4.3.2.2, 6.3.2.6 F Belongs to the SAICAR synthetase family
PEBIFDJM_03811 2.8e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
PEBIFDJM_03812 1.1e-214 purK 6.3.4.18 F Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
PEBIFDJM_03813 2.5e-83 purE 5.4.99.18 F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
PEBIFDJM_03814 8e-28 yebG S NETI protein
PEBIFDJM_03815 4e-93 yebE S UPF0316 protein
PEBIFDJM_03817 2.3e-118 yebC M Membrane
PEBIFDJM_03818 6e-212 pbuG S permease
PEBIFDJM_03819 6.6e-244 S Domain of unknown function (DUF4179)
PEBIFDJM_03820 3.9e-85 K Belongs to the sigma-70 factor family. ECF subfamily
PEBIFDJM_03821 1.1e-305 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
PEBIFDJM_03822 0.0 yebA E COG1305 Transglutaminase-like enzymes
PEBIFDJM_03823 5.8e-222 yeaD S conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
PEBIFDJM_03824 1.7e-176 yeaC S COG0714 MoxR-like ATPases
PEBIFDJM_03825 2.4e-153 yeaB P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
PEBIFDJM_03826 2.6e-253 gabP E COG1113 Gamma-aminobutyrate permease and related permeases
PEBIFDJM_03827 0.0 cotA 1.10.3.4, 1.16.3.3 Q multicopper oxidases
PEBIFDJM_03828 1.1e-178 yeaA S Protein of unknown function (DUF4003)
PEBIFDJM_03829 2.6e-157 ydjP I Alpha/beta hydrolase family
PEBIFDJM_03830 1.4e-34 ydjO S Cold-inducible protein YdjO
PEBIFDJM_03832 1.8e-155 ydjN U Involved in the tonB-independent uptake of proteins
PEBIFDJM_03833 4.5e-64 ydjM M Lytic transglycolase
PEBIFDJM_03834 5.2e-195 bdhA 1.1.1.303, 1.1.1.4 E Dehydrogenase
PEBIFDJM_03835 3.9e-257 iolT EGP Major facilitator Superfamily
PEBIFDJM_03836 5.7e-194 S Ion transport 2 domain protein
PEBIFDJM_03837 4.1e-149 ydjI S virion core protein (lumpy skin disease virus)
PEBIFDJM_03838 1.4e-125 ydjH S COG1512 Beta-propeller domains of methanol dehydrogenase type
PEBIFDJM_03839 9.8e-178 ydjG 3.6.4.12 L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
PEBIFDJM_03840 2.1e-112 pspA KT Phage shock protein A
PEBIFDJM_03841 6.8e-173 ydjE 2.7.1.4 G pfkB family carbohydrate kinase
PEBIFDJM_03842 1.9e-253 gutA G MFS/sugar transport protein
PEBIFDJM_03843 1.6e-199 gutB 1.1.1.14 E Dehydrogenase
PEBIFDJM_03844 0.0 K NB-ARC domain
PEBIFDJM_03845 2.2e-150 ydjC S Abhydrolase domain containing 18
PEBIFDJM_03846 2.2e-280 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
PEBIFDJM_03847 1.3e-42 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
PEBIFDJM_03848 7.9e-129 ydiL S CAAX protease self-immunity
PEBIFDJM_03849 2.9e-27 ydiK S Domain of unknown function (DUF4305)
PEBIFDJM_03850 1.1e-125 tatC U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
PEBIFDJM_03851 7.5e-22 tatA U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system
PEBIFDJM_03852 8.8e-116 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
PEBIFDJM_03853 5.5e-89 moaC 4.6.1.17 H Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP)
PEBIFDJM_03854 0.0 ydiF S ABC transporter
PEBIFDJM_03855 1.4e-187 tsaD 2.3.1.234 O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
PEBIFDJM_03856 6.2e-84 rimI 2.3.1.128 K This enzyme acetylates the N-terminal alanine of ribosomal protein S18
PEBIFDJM_03857 2.7e-123 yeaZ 2.3.1.234 O COG1214 Inactive homolog of metal-dependent proteases
PEBIFDJM_03858 3.5e-85 ydiB 2.7.1.221, 5.1.1.1 S ATPase or kinase
PEBIFDJM_03859 1.3e-179 thiL 2.7.4.16 H Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
PEBIFDJM_03861 7.8e-08
PEBIFDJM_03865 0.0 S ATP-dependent DNA helicase activity
PEBIFDJM_03867 4.4e-145 S serine-type endopeptidase activity
PEBIFDJM_03868 1.8e-100 S DNA binding
PEBIFDJM_03869 3.6e-203
PEBIFDJM_03872 0.0 S RNA-directed RNA polymerase activity
PEBIFDJM_03873 6.5e-16 L GIY-YIG type nucleases (URI domain)
PEBIFDJM_03874 5.8e-94
PEBIFDJM_03875 2.1e-34 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
PEBIFDJM_03877 7.2e-228 S hydrolase activity
PEBIFDJM_03882 4.9e-17
PEBIFDJM_03883 9.6e-109
PEBIFDJM_03884 4e-18
PEBIFDJM_03885 1.6e-35
PEBIFDJM_03887 3.3e-70
PEBIFDJM_03890 1.8e-68
PEBIFDJM_03891 8.8e-79
PEBIFDJM_03892 1.3e-72
PEBIFDJM_03893 3.2e-59
PEBIFDJM_03896 4.5e-53
PEBIFDJM_03897 1.5e-64 S Domain of unknown function (DUF2479)
PEBIFDJM_03898 1.5e-08
PEBIFDJM_03899 5.4e-08 xkdX
PEBIFDJM_03900 2.2e-82
PEBIFDJM_03901 1.3e-62
PEBIFDJM_03902 1.2e-122 xerH L Belongs to the 'phage' integrase family
PEBIFDJM_03904 1.1e-105
PEBIFDJM_03905 0.0 XK26_06135 M COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains)
PEBIFDJM_03906 2.5e-85 S Phage tail protein
PEBIFDJM_03907 8.4e-298 S Pfam Transposase IS66
PEBIFDJM_03908 2.8e-52
PEBIFDJM_03909 1.5e-27
PEBIFDJM_03910 3.5e-74 xlyB 3.5.1.104, 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
PEBIFDJM_03912 9.2e-37 S Bacteriophage holin
PEBIFDJM_03913 9.4e-190 S aspartate phosphatase
PEBIFDJM_03915 1.2e-233 S impB/mucB/samB family C-terminal domain
PEBIFDJM_03916 1.3e-51 S YolD-like protein
PEBIFDJM_03918 1.3e-37
PEBIFDJM_03920 3.6e-10 S Domain of unknown function (DUF4879)
PEBIFDJM_03921 4.2e-80 S SMI1-KNR4 cell-wall
PEBIFDJM_03922 7.8e-173 yobL S Bacterial EndoU nuclease
PEBIFDJM_03923 2.5e-133 V HNH endonuclease
PEBIFDJM_03924 8.2e-67 G SMI1-KNR4 cell-wall
PEBIFDJM_03925 4.7e-33
PEBIFDJM_03926 8.7e-106 yokF 3.1.31.1 L RNA catabolic process
PEBIFDJM_03927 5.8e-81 yhbS S family acetyltransferase
PEBIFDJM_03928 6.1e-243 cisA2 L Recombinase
PEBIFDJM_03930 1.5e-93 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
PEBIFDJM_03931 1.9e-10 K Cro/C1-type HTH DNA-binding domain
PEBIFDJM_03941 1e-164 S Calcineurin-like phosphoesterase
PEBIFDJM_03942 2.5e-30 sspB S spore protein
PEBIFDJM_03944 1.7e-84
PEBIFDJM_03946 2.4e-21 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
PEBIFDJM_03947 2.1e-162 S Thymidylate synthase
PEBIFDJM_03951 2.7e-73 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F Deoxyuridine 5'-triphosphate
PEBIFDJM_03952 8.1e-10
PEBIFDJM_03953 8.9e-37 O Glutaredoxin
PEBIFDJM_03954 1.9e-181 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PEBIFDJM_03956 6.6e-173 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PEBIFDJM_03957 2.8e-73 nrdE 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
PEBIFDJM_03958 2.8e-123 S ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
PEBIFDJM_03959 9e-63 S NrdI Flavodoxin like
PEBIFDJM_03970 1.2e-25 S hydrolase activity
PEBIFDJM_03974 3.3e-13
PEBIFDJM_03979 1.5e-64 dcm 2.1.1.37 L DNA (cytosine-5-)-methyltransferase activity
PEBIFDJM_03980 4.8e-202 nadV 2.4.2.12 H Nicotinate phosphoribosyltransferase (NAPRTase) family
PEBIFDJM_03981 9.2e-86 2.7.6.1 EF Phosphoribosyl synthetase-associated domain
PEBIFDJM_03983 2e-80 tmk 2.1.1.45, 2.7.4.9 F dTDP biosynthetic process
PEBIFDJM_03988 2.3e-112 DR0488 S protein conserved in bacteria
PEBIFDJM_03989 0.0 S Bacterial DNA polymerase III alpha subunit
PEBIFDJM_03990 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
PEBIFDJM_03991 1.1e-222 L DNA primase activity
PEBIFDJM_03992 1e-284 3.6.4.12 J DnaB-like helicase C terminal domain
PEBIFDJM_03993 1.2e-85
PEBIFDJM_03994 7.6e-180 L AAA domain
PEBIFDJM_03995 1.2e-155
PEBIFDJM_03999 1.9e-95 M Parallel beta-helix repeats
PEBIFDJM_04000 2.1e-211 M Parallel beta-helix repeats
PEBIFDJM_04001 3.2e-139 S Pfam:DUF867
PEBIFDJM_04003 2.1e-09 L transposase activity
PEBIFDJM_04005 7.2e-129 yoqW S Belongs to the SOS response-associated peptidase family
PEBIFDJM_04006 2.1e-146 ligB 6.5.1.1, 6.5.1.6, 6.5.1.7 L ATP-dependent DNA ligase
PEBIFDJM_04010 4.2e-52
PEBIFDJM_04014 3.7e-93 S Protein of unknown function (DUF1273)
PEBIFDJM_04018 6.4e-11 S Protein of unknown function (DUF2815)
PEBIFDJM_04022 1.2e-65
PEBIFDJM_04025 7.2e-10 S YopX protein
PEBIFDJM_04030 1.1e-33 K Transcriptional regulator
PEBIFDJM_04031 6e-177
PEBIFDJM_04032 1.6e-260 S DNA-sulfur modification-associated
PEBIFDJM_04033 8.9e-198 L Belongs to the 'phage' integrase family
PEBIFDJM_04038 9.6e-105
PEBIFDJM_04044 1.2e-18
PEBIFDJM_04045 2.2e-93 M Glycosyltransferase like family
PEBIFDJM_04046 7.6e-121 H Methionine biosynthesis protein MetW
PEBIFDJM_04047 9.4e-142 M COG0463 Glycosyltransferases involved in cell wall biogenesis
PEBIFDJM_04048 1.7e-217 sumf2 2.1.1.295 GT2,GT4 H N-terminal domain of galactosyltransferase
PEBIFDJM_04049 4.4e-97 ynaD J Acetyltransferase (GNAT) domain
PEBIFDJM_04051 2e-73 S CAAX protease self-immunity
PEBIFDJM_04052 8.7e-81 XK27_05370 5.3.1.24 E phosphoribosylanthranilate isomerase activity
PEBIFDJM_04053 2.3e-254 xynT G MFS/sugar transport protein
PEBIFDJM_04054 0.0 xynB 3.2.1.37 GH43 G Belongs to the glycosyl hydrolase 43 family
PEBIFDJM_04055 7.3e-214 xylR GK ROK family
PEBIFDJM_04056 1.3e-262 xylA 5.3.1.5 G Belongs to the xylose isomerase family
PEBIFDJM_04057 5.6e-291 xylB 2.7.1.12, 2.7.1.17, 2.7.1.5 G xylulose kinase
PEBIFDJM_04058 6.4e-111 yokF 3.1.31.1 L RNA catabolic process
PEBIFDJM_04059 5.5e-256 iolT EGP Major facilitator Superfamily
PEBIFDJM_04060 1e-218 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
PEBIFDJM_04061 7.7e-82 yncE S Protein of unknown function (DUF2691)
PEBIFDJM_04062 4.9e-78 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F Deoxyuridine 5'-triphosphate
PEBIFDJM_04063 5.2e-15
PEBIFDJM_04066 3e-164 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
PEBIFDJM_04068 1e-125 S Domain of unknown function, YrpD
PEBIFDJM_04071 3.9e-24 tatA U protein secretion
PEBIFDJM_04072 1.8e-71
PEBIFDJM_04073 5.2e-80 yndB S Activator of Hsp90 ATPase homolog 1-like protein
PEBIFDJM_04076 3.9e-279 gerAA EG Spore germination protein
PEBIFDJM_04077 3.8e-196 gerAB U Spore germination
PEBIFDJM_04078 1.8e-218 gerLC S Spore germination protein
PEBIFDJM_04079 2.8e-151 yndG S DoxX-like family
PEBIFDJM_04080 1.6e-307 yndJ S YndJ-like protein
PEBIFDJM_04083 1.5e-135 yndL S Replication protein
PEBIFDJM_04084 6.4e-73 yndM S Protein of unknown function (DUF2512)
PEBIFDJM_04085 4.9e-78 fosB 2.5.1.18 H Metallothiol transferase which confers resistance to fosfomycin by catalyzing the addition of a thiol cofactor to fosfomycin. L-cysteine is probably the physiological thiol donor
PEBIFDJM_04086 2.6e-109 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
PEBIFDJM_04087 3.4e-49 yneA D Inhibits cell division during the SOS response. Affects a later stage of the cell division protein assembly, after the assembly of the Z ring, by probably suppressing recruitment of FtsL and or DivIC to the division machinery
PEBIFDJM_04088 2.9e-111 yneB L resolvase
PEBIFDJM_04089 1.3e-32 ynzC S UPF0291 protein
PEBIFDJM_04090 0.0 tkt 2.2.1.1 G Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
PEBIFDJM_04091 2.2e-81 yneE S Sporulation inhibitor of replication protein sirA
PEBIFDJM_04092 1.8e-28 yneF S UPF0154 protein
PEBIFDJM_04093 7.5e-14 ynzD S Spo0E like sporulation regulatory protein
PEBIFDJM_04094 7.1e-127 ccdA O cytochrome c biogenesis protein
PEBIFDJM_04095 1.2e-58 cheB 3.1.1.61, 3.5.1.44 T cheY-homologous receiver domain
PEBIFDJM_04096 8.6e-76 yneJ O COG4846 Membrane protein involved in cytochrome C biogenesis
PEBIFDJM_04097 4.2e-74 yneK S Protein of unknown function (DUF2621)
PEBIFDJM_04098 8.5e-63 hspX O Spore coat protein
PEBIFDJM_04099 3.9e-19 sspP S Belongs to the SspP family
PEBIFDJM_04100 2.2e-14 sspO S Belongs to the SspO family
PEBIFDJM_04101 0.0 acnA 4.2.1.3 C Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
PEBIFDJM_04102 3.8e-90 yneN CO alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
PEBIFDJM_04104 3.1e-08 sspN S Small acid-soluble spore protein N family
PEBIFDJM_04105 1.5e-34 tlp S Belongs to the Tlp family
PEBIFDJM_04106 2.7e-73 yneP S Thioesterase-like superfamily
PEBIFDJM_04107 2.9e-53 yneQ
PEBIFDJM_04108 4.1e-49 yneR S Belongs to the HesB IscA family
PEBIFDJM_04109 5e-94 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
PEBIFDJM_04110 8.6e-69 yccU S CoA-binding protein
PEBIFDJM_04111 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PEBIFDJM_04112 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
PEBIFDJM_04113 2.3e-12
PEBIFDJM_04114 1.3e-57 ynfC
PEBIFDJM_04115 5.3e-251 agcS E Sodium alanine symporter
PEBIFDJM_04116 5.8e-296 bglC5 3.2.1.4 GH5,GH9 G PFAM glycoside hydrolase family 5
PEBIFDJM_04118 6.9e-250 xynC 3.2.1.136 GH5 M Belongs to the glycosyl hydrolase 30 family
PEBIFDJM_04119 5.6e-294 xynD3 3.2.1.55 CBM6,GH43 G Belongs to the glycosyl hydrolase 43 family
PEBIFDJM_04120 2e-79 yngA S membrane
PEBIFDJM_04121 5.9e-163 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
PEBIFDJM_04122 5.5e-104 yngC S membrane-associated protein
PEBIFDJM_04123 1.2e-232 nrnB S phosphohydrolase (DHH superfamily)
PEBIFDJM_04124 9.1e-289 yngE 2.1.3.15, 6.4.1.3 I COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
PEBIFDJM_04125 2.2e-137 yngF 4.2.1.17 I Belongs to the enoyl-CoA hydratase isomerase family
PEBIFDJM_04126 8e-168 mvaB 4.1.3.4, 6.4.1.4 E Hydroxymethylglutaryl-CoA lyase
PEBIFDJM_04127 6e-32 pycB 2.3.1.12, 6.4.1.1 I Biotin carboxyl carrier protein
PEBIFDJM_04128 8.6e-251 yngH 6.3.4.14, 6.4.1.2, 6.4.1.3, 6.4.1.4 I Biotin carboxylase
PEBIFDJM_04129 0.0 yngI IQ COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II
PEBIFDJM_04130 4.1e-209 yngJ 1.3.8.1, 1.3.99.12 I acyl-CoA dehydrogenase
PEBIFDJM_04131 1.1e-305 yngK T Glycosyl hydrolase-like 10
PEBIFDJM_04132 4e-63 yngL S Protein of unknown function (DUF1360)
PEBIFDJM_04133 0.0 6.3.2.14 Q amino acid activation for nonribosomal peptide biosynthetic process
PEBIFDJM_04134 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PEBIFDJM_04135 7e-95 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PEBIFDJM_04136 3.4e-272 dacC 3.4.16.4 M D-alanyl-D-alanine carboxypeptidase
PEBIFDJM_04137 1.5e-188 yoxA 5.1.3.3 G Aldose 1-epimerase
PEBIFDJM_04138 2.3e-246 yoeA V MATE efflux family protein
PEBIFDJM_04139 1.1e-98 yoeB S IseA DL-endopeptidase inhibitor
PEBIFDJM_04141 2.2e-96 L Integrase
PEBIFDJM_04142 5.1e-34 yoeD G Helix-turn-helix domain
PEBIFDJM_04143 0.0 ggt 2.3.2.2, 3.4.19.13 E gamma-glutamyltransferase
PEBIFDJM_04144 1.2e-157 gltR1 K Transcriptional regulator
PEBIFDJM_04145 1.6e-185 yogA C COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases
PEBIFDJM_04146 2.3e-292 gltD 1.4.1.13, 1.4.1.14 E COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases
PEBIFDJM_04147 0.0 gltB 1.4.1.13, 1.4.1.14, 1.4.7.1 E glutamate synthase
PEBIFDJM_04148 7.8e-155 gltC K Transcriptional regulator
PEBIFDJM_04149 7.8e-205 proB 2.7.2.11 E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
PEBIFDJM_04150 1.6e-143 proC 1.5.1.2 E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
PEBIFDJM_04151 1.9e-59 rtp K Plays a role in DNA replication and termination (fork arrest mechanism). Two dimers of rtp bind to the two inverted repeat regions (IRI and IRII) present in the termination site. The binding of each dimer is centered on an 8 bp direct repeat
PEBIFDJM_04152 2.4e-122 fabG 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
PEBIFDJM_04153 1.4e-39 yoxC S Bacterial protein of unknown function (DUF948)
PEBIFDJM_04154 4.6e-124 yoxB
PEBIFDJM_04155 3.9e-93 yoaA 2.3.1.128 J COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins
PEBIFDJM_04156 1.4e-234 yoaB EGP Major facilitator Superfamily
PEBIFDJM_04157 1.2e-277 yoaC 2.7.1.12, 2.7.1.17, 2.7.1.189, 2.7.1.5 G FGGY family of carbohydrate kinases, C-terminal domain
PEBIFDJM_04158 5.2e-184 yoaD 1.1.1.399, 1.1.1.95 EH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
PEBIFDJM_04159 0.0 yoaE C belongs to the prokaryotic molybdopterin-containing oxidoreductase family
PEBIFDJM_04160 1.1e-33 yoaF
PEBIFDJM_04161 6.5e-08 ywlA S Uncharacterised protein family (UPF0715)
PEBIFDJM_04162 2.6e-13
PEBIFDJM_04163 1.3e-37 S Protein of unknown function (DUF4025)
PEBIFDJM_04164 7.4e-183 mcpU NT methyl-accepting chemotaxis protein
PEBIFDJM_04165 2.4e-278 hpaB 1.14.14.9 Q COG2368 Aromatic ring hydroxylase
PEBIFDJM_04166 1.2e-131 yoaJ G Endoglucanase C-terminal domain subunit and related proteins
PEBIFDJM_04167 2.3e-111 yoaK S Membrane
PEBIFDJM_04168 8.1e-196 pelB 4.2.2.10, 4.2.2.2 G Amb_all
PEBIFDJM_04169 3.5e-131 yoqW S Belongs to the SOS response-associated peptidase family
PEBIFDJM_04172 5.5e-233 oxdC 4.1.1.2 G Oxalate decarboxylase
PEBIFDJM_04174 1.9e-146 yoaP 3.1.3.18 K YoaP-like
PEBIFDJM_04175 5.2e-42 yoaQ S Evidence 4 Homologs of previously reported genes of
PEBIFDJM_04176 5e-87
PEBIFDJM_04177 7.1e-172 yoaR V vancomycin resistance protein
PEBIFDJM_04178 2.8e-74 yoaS S Protein of unknown function (DUF2975)
PEBIFDJM_04179 1.6e-36 yozG K Transcriptional regulator
PEBIFDJM_04180 6.3e-148 yoaT S Protein of unknown function (DUF817)
PEBIFDJM_04181 3.3e-158 yoaU K LysR substrate binding domain
PEBIFDJM_04182 4e-156 yijE EG EamA-like transporter family
PEBIFDJM_04183 6.3e-78 yoaW
PEBIFDJM_04184 3.8e-116 yoaZ 1.11.1.6, 3.5.1.124 S DJ-1/PfpI family
PEBIFDJM_04185 1.2e-166 bla 3.5.2.6 V beta-lactamase
PEBIFDJM_04188 0.0 pps 2.7.9.2 GT phosphoenolpyruvate synthase
PEBIFDJM_04189 4e-121 xlnB 3.2.1.8 G Glycosyl hydrolases family 11
PEBIFDJM_04190 8.8e-37 S TM2 domain
PEBIFDJM_04191 2e-55 K Helix-turn-helix
PEBIFDJM_04193 9.5e-50 FG Scavenger mRNA decapping enzyme C-term binding
PEBIFDJM_04198 4.6e-11 ywlA S Uncharacterised protein family (UPF0715)
PEBIFDJM_04202 4.1e-54 S Tetratricopeptide repeat
PEBIFDJM_04203 5.2e-61 J tRNA cytidylyltransferase activity
PEBIFDJM_04204 2.9e-76 ctsR K Belongs to the CtsR family
PEBIFDJM_04205 1.6e-47 mcsA 2.7.14.1 S protein with conserved CXXC pairs
PEBIFDJM_04206 6.1e-202 mcsB 2.7.14.1, 2.7.3.2, 2.7.3.3 E Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity
PEBIFDJM_04207 0.0 clpC O Belongs to the ClpA ClpB family
PEBIFDJM_04208 6.2e-255 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
PEBIFDJM_04209 1.3e-196 disA 2.7.7.85 L Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
PEBIFDJM_04210 2.7e-197 yacL S COG4956 Integral membrane protein (PIN domain superfamily)
PEBIFDJM_04211 6.5e-125 ispD 2.7.7.60, 4.6.1.12 I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP)
PEBIFDJM_04212 3.1e-86 ispF 2.1.1.228, 2.7.7.60, 4.6.1.12 I Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP)
PEBIFDJM_04213 2.5e-280 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
PEBIFDJM_04214 7.2e-118 cysE 2.3.1.30 E Serine acetyltransferase
PEBIFDJM_04215 1.1e-272 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
PEBIFDJM_04216 1e-72 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
PEBIFDJM_04217 4.4e-135 trmH 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
PEBIFDJM_04218 1.2e-88 yacP S RNA-binding protein containing a PIN domain
PEBIFDJM_04219 4.4e-115 sigH K Belongs to the sigma-70 factor family
PEBIFDJM_04220 1e-21 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
PEBIFDJM_04221 5.2e-96 nusG K Participates in transcription elongation, termination and antitermination
PEBIFDJM_04222 2.8e-70 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
PEBIFDJM_04223 1.1e-124 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
PEBIFDJM_04224 5.1e-79 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
PEBIFDJM_04225 1.3e-42 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
PEBIFDJM_04226 8.2e-108 rsmC 2.1.1.172 J Methyltransferase
PEBIFDJM_04227 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PEBIFDJM_04228 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PEBIFDJM_04229 8e-33 ybxF J Belongs to the eukaryotic ribosomal protein eL8 family
PEBIFDJM_04230 8.5e-72 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
PEBIFDJM_04231 6e-82 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
PEBIFDJM_04232 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
PEBIFDJM_04233 2.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
PEBIFDJM_04234 3.3e-180 ybaC 3.4.11.5 S Alpha/beta hydrolase family
PEBIFDJM_04235 7.5e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
PEBIFDJM_04236 6.3e-111 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
PEBIFDJM_04237 3.9e-105 rplD J Forms part of the polypeptide exit tunnel
PEBIFDJM_04238 1.2e-43 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
PEBIFDJM_04239 1.5e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
PEBIFDJM_04240 3.7e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
PEBIFDJM_04241 4.3e-53 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
PEBIFDJM_04242 8e-117 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
PEBIFDJM_04243 1.3e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
PEBIFDJM_04244 1.7e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
PEBIFDJM_04245 3.5e-39 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
PEBIFDJM_04246 3.9e-60 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
PEBIFDJM_04247 6.2e-51 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
PEBIFDJM_04248 2.3e-93 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
PEBIFDJM_04249 3.4e-28 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
PEBIFDJM_04250 3.9e-66 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
PEBIFDJM_04251 1.3e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
PEBIFDJM_04252 4e-57 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
PEBIFDJM_04253 3.1e-84 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
PEBIFDJM_04254 1.9e-23 rpmD J Ribosomal protein L30
PEBIFDJM_04255 1.8e-72 rplO J binds to the 23S rRNA
PEBIFDJM_04256 7.1e-234 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
PEBIFDJM_04257 5.7e-123 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
PEBIFDJM_04258 8.2e-142 map 3.4.11.18 E Methionine aminopeptidase
PEBIFDJM_04259 1.1e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
PEBIFDJM_04260 4.2e-13 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
PEBIFDJM_04261 3.1e-57 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
PEBIFDJM_04262 2.1e-64 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
PEBIFDJM_04263 3.1e-170 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
PEBIFDJM_04264 3.6e-58 rplQ J Ribosomal protein L17
PEBIFDJM_04265 5.6e-155 cbiO P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PEBIFDJM_04266 3.7e-154 ecfA2 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PEBIFDJM_04267 1e-118 ecfT P Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
PEBIFDJM_04268 2.6e-140 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
PEBIFDJM_04269 6.4e-78 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
PEBIFDJM_04270 4.7e-64 rpsI J Belongs to the universal ribosomal protein uS9 family
PEBIFDJM_04271 9e-144 ybaJ Q Methyltransferase domain
PEBIFDJM_04272 9.7e-66 ybaK S Protein of unknown function (DUF2521)
PEBIFDJM_04273 2.5e-132 cwlD 3.5.1.28 M n-acetylmuramoyl-L-alanine amidase
PEBIFDJM_04274 1.4e-198 mrp D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP
PEBIFDJM_04275 1.2e-84 gerD
PEBIFDJM_04276 1.3e-102 kbaA 2.7.8.43 S Involved in the activation of the KinB signaling pathway of sporulation
PEBIFDJM_04277 2.7e-140 pdaB 3.5.1.104 G Polysaccharide deacetylase
PEBIFDJM_04278 7.6e-94 yqaB E IrrE N-terminal-like domain
PEBIFDJM_04280 1.2e-97 adk 2.7.4.3 F adenylate kinase activity
PEBIFDJM_04282 1.1e-32 K sequence-specific DNA binding
PEBIFDJM_04283 1.2e-17 K Helix-turn-helix XRE-family like proteins
PEBIFDJM_04285 1.2e-103
PEBIFDJM_04289 1e-173 yqaJ L YqaJ-like viral recombinase domain
PEBIFDJM_04290 7.9e-149 recT L RecT family
PEBIFDJM_04291 3.2e-119 3.1.3.16 L DnaD domain protein
PEBIFDJM_04292 3e-164 xkdC L IstB-like ATP binding protein
PEBIFDJM_04294 3.7e-70 rusA L Endodeoxyribonuclease RusA
PEBIFDJM_04295 3.7e-31 yqaO S Phage-like element PBSX protein XtrA
PEBIFDJM_04299 2.1e-76 L Transposase
PEBIFDJM_04300 3.9e-22
PEBIFDJM_04302 2.1e-42
PEBIFDJM_04305 2.6e-77 yqaS L DNA packaging
PEBIFDJM_04306 6.9e-245 S phage terminase, large subunit
PEBIFDJM_04307 6.3e-290 yqbA S portal protein
PEBIFDJM_04308 1.4e-151 S Phage Mu protein F like protein
PEBIFDJM_04310 3.8e-115 yqbD 2.1.1.72 L Putative phage serine protease XkdF
PEBIFDJM_04311 9.2e-167 xkdG S Phage capsid family
PEBIFDJM_04312 6.7e-45 S YqbF, hypothetical protein domain
PEBIFDJM_04313 3.9e-66 S Protein of unknown function (DUF3199)
PEBIFDJM_04314 2.2e-63 yqbH S Domain of unknown function (DUF3599)
PEBIFDJM_04315 3.3e-86 S Bacteriophage HK97-gp10, putative tail-component
PEBIFDJM_04316 6.6e-75
PEBIFDJM_04317 4.6e-25
PEBIFDJM_04318 7.4e-253 xkdK S Phage tail sheath C-terminal domain
PEBIFDJM_04319 3.6e-76 xkdM S Phage tail tube protein
PEBIFDJM_04320 2.8e-68 S Phage XkdN-like tail assembly chaperone protein, TAC
PEBIFDJM_04321 1.3e-16
PEBIFDJM_04322 0.0 xkdO L Transglycosylase SLT domain
PEBIFDJM_04323 7.6e-113 xkdP S Lysin motif
PEBIFDJM_04324 6.7e-176 yqbQ 3.2.1.96 G NLP P60 protein
PEBIFDJM_04325 1.6e-34 xkdR S Protein of unknown function (DUF2577)
PEBIFDJM_04326 2.3e-109 5.1.1.13 M Belongs to the aspartate glutamate racemases family
PEBIFDJM_04327 1.2e-65 xkdS S Protein of unknown function (DUF2634)
PEBIFDJM_04328 3e-182 xkdT S Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology
PEBIFDJM_04329 1.5e-95 xkdU S Uncharacterised protein conserved in bacteria (DUF2313)
PEBIFDJM_04330 7.6e-37
PEBIFDJM_04331 4.1e-190
PEBIFDJM_04332 1e-54 xkdW S XkdW protein
PEBIFDJM_04333 1.5e-19
PEBIFDJM_04334 1.7e-162 xepA
PEBIFDJM_04335 2.6e-68 S Bacteriophage holin family
PEBIFDJM_04336 3.4e-133 xlyA 3.5.1.28 M N-acetylmuramoyl-L-alanine amidase
PEBIFDJM_04338 2.2e-135 resA 3.1.21.5 L helicase
PEBIFDJM_04339 5.1e-32
PEBIFDJM_04340 5.5e-101 S Suppressor of fused protein (SUFU)
PEBIFDJM_04341 6.6e-274 A Pre-toxin TG
PEBIFDJM_04343 2.3e-156 S Aspartate phosphatase response regulator
PEBIFDJM_04346 1.6e-54 arsR K ArsR family transcriptional regulator
PEBIFDJM_04347 5.7e-66 cadI 4.4.1.5 E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
PEBIFDJM_04348 8.7e-182 arsB 1.20.4.1 P Arsenic resistance protein
PEBIFDJM_04349 4e-77 arsC 1.20.4.1 T Catalyzes the reduction of arsenate As(V) to arsenite As(III)
PEBIFDJM_04350 1.3e-22 L Helix-turn-helix domain of resolvase
PEBIFDJM_04351 6e-140 yhfP 1.1.1.1 C Alcohol dehydrogenase GroES-like domain
PEBIFDJM_04352 4.2e-64 K BetI-type transcriptional repressor, C-terminal
PEBIFDJM_04353 1.2e-277 cisA2 L Recombinase
PEBIFDJM_04354 4.9e-30 csfB S Inhibitor of sigma-G Gin
PEBIFDJM_04355 6.8e-102 xpaC S 5-bromo-4-chloroindolyl phosphate hydrolysis protein
PEBIFDJM_04356 9.9e-203 yaaN P Belongs to the TelA family
PEBIFDJM_04357 1.5e-272 adiA 4.1.1.17, 4.1.1.18, 4.1.1.19 E Orn Lys Arg decarboxylase
PEBIFDJM_04358 1.4e-113 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
PEBIFDJM_04359 2.2e-54 yaaQ S protein conserved in bacteria
PEBIFDJM_04360 1.5e-71 yaaR S protein conserved in bacteria
PEBIFDJM_04361 1.1e-181 holB 2.7.7.7 L DNA polymerase III
PEBIFDJM_04362 2.1e-146 yaaT S stage 0 sporulation protein
PEBIFDJM_04363 4.8e-31 yabA L Involved in initiation control of chromosome replication
PEBIFDJM_04364 2.5e-138 yabB 2.1.1.223 S Conserved hypothetical protein 95
PEBIFDJM_04365 1.5e-49 yazA L endonuclease containing a URI domain
PEBIFDJM_04366 1.2e-152 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
PEBIFDJM_04367 8.8e-44 abrB K COG2002 Regulators of stationary sporulation gene expression
PEBIFDJM_04368 0.0 metG 6.1.1.10, 6.1.1.20 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
PEBIFDJM_04369 1.2e-143 tatD L hydrolase, TatD
PEBIFDJM_04370 2e-167 rpfB GH23 T protein conserved in bacteria
PEBIFDJM_04371 4.6e-97 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
PEBIFDJM_04372 1.2e-155 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
PEBIFDJM_04373 6.2e-136 yabG S peptidase
PEBIFDJM_04374 7.8e-39 veg S protein conserved in bacteria
PEBIFDJM_04375 8.3e-27 sspF S DNA topological change
PEBIFDJM_04376 4.1e-161 ispE 2.1.1.182, 2.7.1.148 I Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
PEBIFDJM_04377 2.6e-152 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
PEBIFDJM_04378 3.8e-63 yabJ 3.5.99.10 J translation initiation inhibitor, yjgF family
PEBIFDJM_04379 4.6e-48 spoVG D Essential for sporulation. Interferes with or is a negative regulator of the pathway leading to asymmetric septation
PEBIFDJM_04380 6.2e-228 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
PEBIFDJM_04381 9.4e-175 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
PEBIFDJM_04382 1.9e-96 ctc J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
PEBIFDJM_04383 1.2e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
PEBIFDJM_04384 2.4e-39 yabK S Peptide ABC transporter permease
PEBIFDJM_04385 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
PEBIFDJM_04386 1.5e-92 spoVT K stage V sporulation protein
PEBIFDJM_04387 3.4e-278 yabM S COG2244 Membrane protein involved in the export of O-antigen and teichoic acid
PEBIFDJM_04388 4.7e-242 mazG 3.6.1.66, 3.6.1.9 S COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like
PEBIFDJM_04389 1.1e-37 yabO J COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
PEBIFDJM_04390 1.5e-49 yabP S Sporulation protein YabP
PEBIFDJM_04391 2.5e-107 yabQ S spore cortex biosynthesis protein
PEBIFDJM_04392 1.1e-44 divIC D Septum formation initiator
PEBIFDJM_04393 8.5e-58 yabR J RNA binding protein (contains ribosomal protein S1 domain)
PEBIFDJM_04396 0.0 spoIIE 3.1.3.16, 3.1.3.3 KT stage II sporulation protein E
PEBIFDJM_04397 1.5e-124 yabS S protein containing a von Willebrand factor type A (vWA) domain
PEBIFDJM_04398 7.4e-186 KLT serine threonine protein kinase
PEBIFDJM_04399 1.2e-271 tilS 2.4.2.8, 6.3.4.19 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
PEBIFDJM_04400 7.9e-94 hpt 2.4.2.8, 6.3.4.19 F Belongs to the purine pyrimidine phosphoribosyltransferase family
PEBIFDJM_04401 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
PEBIFDJM_04402 1.5e-146 coaX 2.7.1.33 F Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
PEBIFDJM_04403 2.9e-162 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
PEBIFDJM_04404 1.7e-151 yacD 5.2.1.8 O peptidyl-prolyl isomerase
PEBIFDJM_04405 2.6e-169 cysK 2.5.1.47 E Belongs to the cysteine synthase cystathionine beta- synthase family
PEBIFDJM_04406 2.2e-268 pabB 2.6.1.85 EH Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
PEBIFDJM_04407 4.3e-106 pabA 2.6.1.85, 4.1.3.27 EH Anthranilate synthase
PEBIFDJM_04408 8.7e-167 pabC 2.6.1.42, 4.1.3.38 EH 4-amino-4-deoxychorismate lyase
PEBIFDJM_04409 8.5e-159 folP 2.5.1.15, 2.7.6.3 H Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
PEBIFDJM_04410 5.9e-61 folB 1.13.11.81, 2.5.1.15, 2.7.6.3, 4.1.2.25, 5.1.99.8 H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
PEBIFDJM_04411 2.7e-88 folK 1.13.11.81, 2.5.1.15, 2.7.6.3, 3.5.4.16, 4.1.2.25, 5.1.99.8 H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
PEBIFDJM_04412 4.1e-30 yazB K transcriptional
PEBIFDJM_04413 8.3e-190 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
PEBIFDJM_04414 3.8e-287 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
PEBIFDJM_04415 3.7e-36 bofA S Sigma-K factor-processing regulatory protein BofA
PEBIFDJM_04416 7.9e-32 yaaL S Protein of unknown function (DUF2508)
PEBIFDJM_04417 3.9e-110 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
PEBIFDJM_04418 5.3e-37 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
PEBIFDJM_04419 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
PEBIFDJM_04420 4.3e-83 tadA 3.5.4.1, 3.5.4.3, 3.5.4.33 FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
PEBIFDJM_04421 1.9e-95 yaaI Q COG1335 Amidases related to nicotinamidase
PEBIFDJM_04422 3.6e-214 yaaH M Glycoside Hydrolase Family
PEBIFDJM_04423 3.6e-114 dgk 2.7.1.113, 2.7.1.74, 2.7.1.76 F Deoxyguanosine kinase
PEBIFDJM_04424 2.2e-122 dck 2.7.1.113, 2.7.1.74, 2.7.1.76 F Deoxycytidine kinase
PEBIFDJM_04425 1.3e-09
PEBIFDJM_04426 4.3e-207 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
PEBIFDJM_04427 2.3e-107 pdxT 4.3.3.6 H Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
PEBIFDJM_04428 2.2e-157 pdxS 4.3.3.6 H Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
PEBIFDJM_04429 1.2e-247 dacA 3.4.16.4 M Belongs to the peptidase S11 family
PEBIFDJM_04430 1.8e-273 guaB 1.1.1.205 F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth
PEBIFDJM_04431 1e-181 yaaC S YaaC-like Protein
PEBIFDJM_04432 1.4e-95 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PEBIFDJM_04433 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PEBIFDJM_04434 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PEBIFDJM_04435 0.0 Q Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
PEBIFDJM_04440 3.4e-39 S COG NOG14552 non supervised orthologous group
PEBIFDJM_04445 2e-08
PEBIFDJM_04452 2e-08
PEBIFDJM_04458 6.3e-57 adoK 2.7.1.15, 2.7.1.20 G Ribokinase

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)