ORF_ID e_value Gene_name EC_number CAZy COGs Description
CFOOKOKI_00002 0.0 3.1.31.1 M domain protein
CFOOKOKI_00003 0.0 infB UW LPXTG-motif cell wall anchor domain protein
CFOOKOKI_00004 0.0 UW LPXTG-motif cell wall anchor domain protein
CFOOKOKI_00005 0.0 S domain, Protein
CFOOKOKI_00006 1.5e-191 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CFOOKOKI_00007 1.4e-101 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
CFOOKOKI_00008 7.6e-211 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
CFOOKOKI_00009 9.8e-255 gor 1.8.1.7 C pyridine nucleotide-disulfide oxidoreductase
CFOOKOKI_00010 1.9e-168 K AI-2E family transporter
CFOOKOKI_00011 9.2e-26
CFOOKOKI_00013 5.3e-27
CFOOKOKI_00014 4.3e-41
CFOOKOKI_00015 4.8e-38
CFOOKOKI_00017 2.6e-29
CFOOKOKI_00020 3.3e-137 S Alpha beta hydrolase
CFOOKOKI_00021 0.0 L Helicase C-terminal domain protein
CFOOKOKI_00022 2.2e-159 xth 3.1.11.2 L exodeoxyribonuclease III
CFOOKOKI_00023 4.2e-40 S Transglycosylase associated protein
CFOOKOKI_00025 5.9e-166 P CorA-like Mg2+ transporter protein
CFOOKOKI_00026 1.6e-196 L COG2826 Transposase and inactivated derivatives, IS30 family
CFOOKOKI_00027 6.8e-205 XK27_02480 EGP Major facilitator Superfamily
CFOOKOKI_00028 3.3e-142 ropB K Helix-turn-helix XRE-family like proteins
CFOOKOKI_00029 0.0 pepO 3.4.24.71 O Peptidase family M13
CFOOKOKI_00030 3.1e-240 clcA P chloride
CFOOKOKI_00031 0.0 tetP J elongation factor G
CFOOKOKI_00032 1.3e-140 ropB K Helix-turn-helix domain
CFOOKOKI_00033 1.8e-287 V ABC-type multidrug transport system, ATPase and permease components
CFOOKOKI_00034 3.5e-17
CFOOKOKI_00035 5.8e-152 yitS S EDD domain protein, DegV family
CFOOKOKI_00036 3.7e-136 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
CFOOKOKI_00037 5.3e-127 S Protein of unknown function (DUF975)
CFOOKOKI_00038 1.7e-114 ywnB S NAD(P)H-binding
CFOOKOKI_00039 4e-156 arbZ I Acyltransferase
CFOOKOKI_00040 2.7e-216 S Sterol carrier protein domain
CFOOKOKI_00042 3.6e-62 steT E amino acid
CFOOKOKI_00043 2.3e-156 steT E amino acid
CFOOKOKI_00045 0.0
CFOOKOKI_00046 2.2e-218 I Protein of unknown function (DUF2974)
CFOOKOKI_00047 1e-170 scrK 2.7.1.2, 2.7.1.4 GK ROK family
CFOOKOKI_00048 1.6e-244 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
CFOOKOKI_00049 8.2e-76 rplI J Binds to the 23S rRNA
CFOOKOKI_00050 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
CFOOKOKI_00051 3.5e-158 corA P CorA-like Mg2+ transporter protein
CFOOKOKI_00052 2.1e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CFOOKOKI_00053 7.3e-81 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
CFOOKOKI_00054 9.4e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
CFOOKOKI_00055 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CFOOKOKI_00056 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CFOOKOKI_00057 1.2e-208 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CFOOKOKI_00058 1.6e-20 yaaA S S4 domain
CFOOKOKI_00059 3.2e-206 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
CFOOKOKI_00060 2.4e-256 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CFOOKOKI_00061 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
CFOOKOKI_00062 3.5e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
CFOOKOKI_00063 1.6e-149 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
CFOOKOKI_00064 2.3e-252 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CFOOKOKI_00065 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
CFOOKOKI_00066 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
CFOOKOKI_00067 3.9e-270 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CFOOKOKI_00068 9.3e-289 clcA P chloride
CFOOKOKI_00069 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
CFOOKOKI_00070 1.5e-68 S Iron-sulphur cluster biosynthesis
CFOOKOKI_00071 2e-228 EGP Sugar (and other) transporter
CFOOKOKI_00072 2.6e-65 K Acetyltransferase (GNAT) domain
CFOOKOKI_00073 8.5e-248 ynbB 4.4.1.1 P aluminum resistance
CFOOKOKI_00074 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
CFOOKOKI_00075 9.8e-280 E Amino acid permease
CFOOKOKI_00076 0.0 copA 3.6.3.54 P P-type ATPase
CFOOKOKI_00077 8.3e-50 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
CFOOKOKI_00078 2.7e-64 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
CFOOKOKI_00079 1.6e-73 atkY K Penicillinase repressor
CFOOKOKI_00080 7.6e-92
CFOOKOKI_00081 2.4e-74
CFOOKOKI_00082 3e-69 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
CFOOKOKI_00083 7.9e-77 K Bacteriophage CI repressor helix-turn-helix domain
CFOOKOKI_00084 1.5e-226 pbuG S permease
CFOOKOKI_00085 1.5e-231 pbuG S permease
CFOOKOKI_00086 9.3e-130 K helix_turn_helix, mercury resistance
CFOOKOKI_00087 8.8e-232 pbuG S permease
CFOOKOKI_00088 2.3e-234 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
CFOOKOKI_00089 6.3e-125 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
CFOOKOKI_00090 1e-119 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
CFOOKOKI_00091 7.9e-134 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
CFOOKOKI_00092 4.1e-158 yeaE S Aldo/keto reductase family
CFOOKOKI_00093 2.3e-131 S membrane transporter protein
CFOOKOKI_00094 0.0 sacX 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
CFOOKOKI_00095 4.4e-150 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
CFOOKOKI_00096 6.6e-169 yleB 4.2.1.126 S Bacterial protein of unknown function (DUF871)
CFOOKOKI_00097 6.8e-148 K Helix-turn-helix domain, rpiR family
CFOOKOKI_00098 6e-94 tcsA S ABC transporter substrate-binding protein PnrA-like
CFOOKOKI_00099 2.7e-65 tcsA S ABC transporter substrate-binding protein PnrA-like
CFOOKOKI_00100 2.9e-168 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
CFOOKOKI_00101 1.8e-175 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
CFOOKOKI_00102 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CFOOKOKI_00103 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
CFOOKOKI_00104 2e-183 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
CFOOKOKI_00105 1.1e-269 cydA 1.10.3.14 C ubiquinol oxidase
CFOOKOKI_00106 0.0 macB_3 V ABC transporter, ATP-binding protein
CFOOKOKI_00107 7.6e-200 S DUF218 domain
CFOOKOKI_00108 3.5e-104 S CAAX protease self-immunity
CFOOKOKI_00109 1.5e-91 S Protein of unknown function (DUF1440)
CFOOKOKI_00110 3.9e-265 G PTS system Galactitol-specific IIC component
CFOOKOKI_00111 4.2e-15
CFOOKOKI_00112 1e-09
CFOOKOKI_00113 1.9e-75 S Protein of unknown function (DUF805)
CFOOKOKI_00114 2.1e-112 S Protein of unknown function (DUF969)
CFOOKOKI_00115 8.6e-157 S Protein of unknown function (DUF979)
CFOOKOKI_00116 2.1e-117 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CFOOKOKI_00117 4.6e-35
CFOOKOKI_00118 2.8e-157 mutR K Helix-turn-helix XRE-family like proteins
CFOOKOKI_00119 4.4e-278 V ABC transporter transmembrane region
CFOOKOKI_00121 1.5e-48 S Putative adhesin
CFOOKOKI_00122 1.9e-201 napA P Sodium/hydrogen exchanger family
CFOOKOKI_00123 0.0 cadA P P-type ATPase
CFOOKOKI_00124 6.1e-85 ykuL S (CBS) domain
CFOOKOKI_00125 2.1e-45
CFOOKOKI_00126 1.1e-49
CFOOKOKI_00127 5.7e-59
CFOOKOKI_00129 2.4e-201 ywhK S Membrane
CFOOKOKI_00130 8.7e-39
CFOOKOKI_00132 6.9e-289 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CFOOKOKI_00133 1.4e-234 dltB M MBOAT, membrane-bound O-acyltransferase family
CFOOKOKI_00134 6.7e-37 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CFOOKOKI_00135 2.6e-252 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CFOOKOKI_00136 9.9e-146 pbpX2 V Beta-lactamase
CFOOKOKI_00137 2.1e-211 lmrP E Major Facilitator Superfamily
CFOOKOKI_00138 2.1e-38
CFOOKOKI_00139 3.2e-213 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CFOOKOKI_00140 1.5e-156 S Alpha/beta hydrolase of unknown function (DUF915)
CFOOKOKI_00141 0.0 clpE2 O AAA domain (Cdc48 subfamily)
CFOOKOKI_00142 1.7e-93 yxkA S Phosphatidylethanolamine-binding protein
CFOOKOKI_00143 9.8e-112 K transcriptional regulator
CFOOKOKI_00144 9.4e-12
CFOOKOKI_00145 2e-172 L Belongs to the 'phage' integrase family
CFOOKOKI_00146 4.3e-26 S Domain of unknown function (DUF3173)
CFOOKOKI_00150 1.3e-69 arsC 1.20.4.1 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CFOOKOKI_00151 7.6e-186 arsB 1.20.4.1 P Sodium Bile acid symporter family
CFOOKOKI_00152 5.4e-52 arsR K helix_turn_helix, Arsenical Resistance Operon Repressor
CFOOKOKI_00153 2.1e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
CFOOKOKI_00154 3e-131 K Psort location CytoplasmicMembrane, score
CFOOKOKI_00155 3.8e-102 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
CFOOKOKI_00156 3.5e-236 pbuX F xanthine permease
CFOOKOKI_00157 2.9e-240 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CFOOKOKI_00158 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
CFOOKOKI_00159 2.5e-63 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
CFOOKOKI_00160 1.6e-73 S Domain of unknown function (DUF1934)
CFOOKOKI_00161 1.5e-266 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
CFOOKOKI_00162 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
CFOOKOKI_00163 2.4e-153 malG P ABC transporter permease
CFOOKOKI_00164 5e-254 malF P Binding-protein-dependent transport system inner membrane component
CFOOKOKI_00165 7.4e-217 malE G Bacterial extracellular solute-binding protein
CFOOKOKI_00166 2.7e-210 msmX P Belongs to the ABC transporter superfamily
CFOOKOKI_00167 8.1e-117 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
CFOOKOKI_00168 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
CFOOKOKI_00169 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
CFOOKOKI_00170 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
CFOOKOKI_00171 2.5e-175 yvdE K helix_turn _helix lactose operon repressor
CFOOKOKI_00172 1.1e-173 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CFOOKOKI_00173 1.3e-217 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CFOOKOKI_00174 1.5e-152 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
CFOOKOKI_00175 2.2e-35 veg S Biofilm formation stimulator VEG
CFOOKOKI_00176 3.6e-160 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
CFOOKOKI_00177 1.2e-97 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CFOOKOKI_00178 2.3e-147 tatD L hydrolase, TatD family
CFOOKOKI_00179 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CFOOKOKI_00180 8.5e-182 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
CFOOKOKI_00181 4e-99 S TPM domain
CFOOKOKI_00182 5.6e-91 comEB 3.5.4.12 F MafB19-like deaminase
CFOOKOKI_00183 2e-194 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
CFOOKOKI_00184 1.2e-114 E Belongs to the SOS response-associated peptidase family
CFOOKOKI_00186 1.8e-116
CFOOKOKI_00187 2.2e-154 ypbG 2.7.1.2 GK ROK family
CFOOKOKI_00188 1e-278 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
CFOOKOKI_00189 6.1e-263 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CFOOKOKI_00190 7.6e-52 ptcB 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
CFOOKOKI_00191 2.1e-41
CFOOKOKI_00192 1.5e-50 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
CFOOKOKI_00193 1e-133 gmuR K UTRA
CFOOKOKI_00194 5.4e-302 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
CFOOKOKI_00195 9.2e-71 S Domain of unknown function (DUF3284)
CFOOKOKI_00196 5.2e-130 yydK K UTRA
CFOOKOKI_00197 2.8e-241 celD 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CFOOKOKI_00198 3e-79
CFOOKOKI_00199 8.4e-292 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
CFOOKOKI_00200 5.6e-77 hsp O Belongs to the small heat shock protein (HSP20) family
CFOOKOKI_00201 1.6e-74 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CFOOKOKI_00202 1.8e-33
CFOOKOKI_00203 9.7e-255 pepC 3.4.22.40 E aminopeptidase
CFOOKOKI_00204 9.8e-123 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
CFOOKOKI_00205 4.8e-131 oppF P Belongs to the ABC transporter superfamily
CFOOKOKI_00206 4.4e-170 oppD P Belongs to the ABC transporter superfamily
CFOOKOKI_00207 1.2e-148 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
CFOOKOKI_00208 3.9e-125 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
CFOOKOKI_00209 1.2e-198 oppA E ABC transporter, substratebinding protein
CFOOKOKI_00210 1e-256 pepC 3.4.22.40 E aminopeptidase
CFOOKOKI_00212 4.8e-243 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CFOOKOKI_00213 0.0 XK27_08315 M Sulfatase
CFOOKOKI_00214 1.9e-112 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
CFOOKOKI_00215 6.6e-196 brpA K Cell envelope-like function transcriptional attenuator common domain protein
CFOOKOKI_00216 8.4e-170 yqhA G Aldose 1-epimerase
CFOOKOKI_00217 1.2e-152 glcU U sugar transport
CFOOKOKI_00218 1.2e-118
CFOOKOKI_00219 8e-179 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
CFOOKOKI_00220 3.4e-71 2.4.1.83 GT2 S GtrA-like protein
CFOOKOKI_00221 9.7e-42 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CFOOKOKI_00222 2.7e-45 S HicB_like antitoxin of bacterial toxin-antitoxin system
CFOOKOKI_00223 1.1e-132 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CFOOKOKI_00224 1.2e-73 S PAS domain
CFOOKOKI_00225 4.8e-143
CFOOKOKI_00226 1.4e-101
CFOOKOKI_00227 1.4e-178 S Oxidoreductase family, NAD-binding Rossmann fold
CFOOKOKI_00228 0.0 yjbQ P TrkA C-terminal domain protein
CFOOKOKI_00229 2.4e-142 fruK 2.7.1.11, 2.7.1.56 G pfkB family carbohydrate kinase
CFOOKOKI_00230 2.9e-223 lysA2 M Glycosyl hydrolases family 25
CFOOKOKI_00231 7.5e-217 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
CFOOKOKI_00232 8.2e-35 S Protein of unknown function (DUF2922)
CFOOKOKI_00233 1.9e-115
CFOOKOKI_00234 1e-72
CFOOKOKI_00235 0.0 kup P Transport of potassium into the cell
CFOOKOKI_00236 0.0 kup P Transport of potassium into the cell
CFOOKOKI_00237 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
CFOOKOKI_00238 0.0 S Bacterial membrane protein, YfhO
CFOOKOKI_00239 0.0 pepO 3.4.24.71 O Peptidase family M13
CFOOKOKI_00240 0.0 fruA 2.7.1.200, 2.7.1.202 GT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CFOOKOKI_00241 3.7e-168 pfkB 2.7.1.11, 2.7.1.56 H pfkB family carbohydrate kinase
CFOOKOKI_00242 4.4e-135 rpl K Helix-turn-helix domain, rpiR family
CFOOKOKI_00243 5.9e-175 D nuclear chromosome segregation
CFOOKOKI_00244 1.4e-184 yihT 4.1.2.40, 4.1.2.57 G Belongs to the aldolase LacD family
CFOOKOKI_00245 2e-225 yttB EGP Major facilitator Superfamily
CFOOKOKI_00246 1.2e-224 XK27_04775 S PAS domain
CFOOKOKI_00247 2e-103 S Iron-sulfur cluster assembly protein
CFOOKOKI_00248 1.2e-129 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CFOOKOKI_00249 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
CFOOKOKI_00250 3.6e-265 yxbA 6.3.1.12 S ATP-grasp enzyme
CFOOKOKI_00251 0.0 asnB 6.3.5.4 E Asparagine synthase
CFOOKOKI_00252 3.1e-275 S Calcineurin-like phosphoesterase
CFOOKOKI_00253 1.9e-83
CFOOKOKI_00254 4.6e-146 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
CFOOKOKI_00255 5.4e-131 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
CFOOKOKI_00256 9.6e-141 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
CFOOKOKI_00257 9.8e-169 phnD P Phosphonate ABC transporter
CFOOKOKI_00259 1e-87 uspA T universal stress protein
CFOOKOKI_00260 2.8e-148 ptp3 3.1.3.48 T Tyrosine phosphatase family
CFOOKOKI_00261 1.1e-130 XK27_08440 K UTRA domain
CFOOKOKI_00262 3.4e-100 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CFOOKOKI_00263 4.8e-87 ntd 2.4.2.6 F Nucleoside
CFOOKOKI_00264 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
CFOOKOKI_00265 5.3e-195 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
CFOOKOKI_00266 6.1e-171 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
CFOOKOKI_00267 3.7e-76 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CFOOKOKI_00268 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
CFOOKOKI_00269 7.8e-55
CFOOKOKI_00270 1.7e-173 degV S DegV family
CFOOKOKI_00271 3.7e-218 I transferase activity, transferring acyl groups other than amino-acyl groups
CFOOKOKI_00272 2e-241 cpdA S Calcineurin-like phosphoesterase
CFOOKOKI_00273 2.2e-215 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
CFOOKOKI_00274 4.5e-71 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
CFOOKOKI_00275 9.7e-103 ypsA S Belongs to the UPF0398 family
CFOOKOKI_00276 1.3e-113 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
CFOOKOKI_00277 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
CFOOKOKI_00278 5.5e-115 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CFOOKOKI_00279 1.8e-113 dnaD L DnaD domain protein
CFOOKOKI_00280 6.4e-259 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
CFOOKOKI_00281 2.4e-89 ypmB S Protein conserved in bacteria
CFOOKOKI_00282 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
CFOOKOKI_00283 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
CFOOKOKI_00284 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
CFOOKOKI_00285 2e-169 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
CFOOKOKI_00286 1.1e-173 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
CFOOKOKI_00287 2.7e-202 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
CFOOKOKI_00288 4.8e-185 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
CFOOKOKI_00289 9.8e-278 V ABC-type multidrug transport system, ATPase and permease components
CFOOKOKI_00290 3.8e-290 V ABC-type multidrug transport system, ATPase and permease components
CFOOKOKI_00291 2e-209 G Transmembrane secretion effector
CFOOKOKI_00292 9.8e-157 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
CFOOKOKI_00293 2.1e-160 rbsU U ribose uptake protein RbsU
CFOOKOKI_00294 5.6e-65 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
CFOOKOKI_00295 5.1e-156 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CFOOKOKI_00296 3.5e-71 6.3.3.2 S ASCH
CFOOKOKI_00297 4.3e-149 2.4.2.3 F Phosphorylase superfamily
CFOOKOKI_00298 9.2e-144 2.4.2.3 F Phosphorylase superfamily
CFOOKOKI_00299 1.3e-115 2.4.2.3 F Phosphorylase superfamily
CFOOKOKI_00300 7e-83 3.6.1.55 F NUDIX domain
CFOOKOKI_00301 7.4e-19 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
CFOOKOKI_00302 6.9e-167 yxaM EGP Major facilitator Superfamily
CFOOKOKI_00303 7.6e-54 cdd 2.4.2.4, 3.5.4.5 F Cytidine and deoxycytidylate deaminase zinc-binding region
CFOOKOKI_00304 7.5e-93 S Alpha/beta hydrolase family
CFOOKOKI_00305 8.4e-15 S Alpha/beta hydrolase family
CFOOKOKI_00306 2.6e-109 XK27_07525 3.6.1.55 F NUDIX domain
CFOOKOKI_00307 2.3e-87 2.3.1.57 K Acetyltransferase (GNAT) family
CFOOKOKI_00308 1.3e-88 rimL J Acetyltransferase (GNAT) domain
CFOOKOKI_00309 1.9e-138 aroD S Serine hydrolase (FSH1)
CFOOKOKI_00310 5.6e-255 I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CFOOKOKI_00311 4.7e-40
CFOOKOKI_00312 8.8e-118 3.1.3.48 T Tyrosine phosphatase family
CFOOKOKI_00313 3.8e-60
CFOOKOKI_00314 1.4e-47 S MazG-like family
CFOOKOKI_00315 1.7e-84 FG HIT domain
CFOOKOKI_00316 1.5e-71
CFOOKOKI_00317 1.2e-74 K Acetyltransferase (GNAT) domain
CFOOKOKI_00318 2.9e-76
CFOOKOKI_00319 1.4e-67
CFOOKOKI_00320 3.5e-63 speG J Acetyltransferase (GNAT) domain
CFOOKOKI_00321 9.4e-43
CFOOKOKI_00322 4.7e-51 S endonuclease activity
CFOOKOKI_00323 3.5e-52
CFOOKOKI_00324 1.7e-277 V ABC transporter transmembrane region
CFOOKOKI_00325 2.1e-28 C nitroreductase
CFOOKOKI_00326 3.1e-31 C nitroreductase
CFOOKOKI_00327 8.3e-205 yhjX P Major Facilitator Superfamily
CFOOKOKI_00328 4.6e-241 eno2 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CFOOKOKI_00329 3e-64
CFOOKOKI_00330 4.5e-291 V ABC-type multidrug transport system, ATPase and permease components
CFOOKOKI_00331 1.5e-56 P ABC transporter
CFOOKOKI_00332 8.3e-98 V (ABC) transporter
CFOOKOKI_00333 1.6e-133 qmcA O prohibitin homologues
CFOOKOKI_00334 9.1e-51 yafQ S Bacterial toxin of type II toxin-antitoxin system, YafQ
CFOOKOKI_00335 7.5e-40 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
CFOOKOKI_00336 3.7e-41 K sequence-specific DNA binding
CFOOKOKI_00337 3.9e-204 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
CFOOKOKI_00338 5.3e-45 S SnoaL-like domain
CFOOKOKI_00339 2e-163 C Oxidoreductase
CFOOKOKI_00340 6e-117 drgA C nitroreductase
CFOOKOKI_00341 3.1e-305 2.7.7.7 S Domain of unknown function (DUF5060)
CFOOKOKI_00342 4.2e-167 uhpT EGP Major facilitator Superfamily
CFOOKOKI_00343 2.7e-169 rbsR K helix_turn _helix lactose operon repressor
CFOOKOKI_00344 0.0 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
CFOOKOKI_00345 4.9e-151 licT K CAT RNA binding domain
CFOOKOKI_00346 4.4e-260 G Protein of unknown function (DUF4038)
CFOOKOKI_00347 1.9e-291 G isomerase
CFOOKOKI_00348 7.4e-186 purR13 K Bacterial regulatory proteins, lacI family
CFOOKOKI_00349 8.8e-153 2.2.1.1 G Transketolase, thiamine diphosphate binding domain
CFOOKOKI_00350 3.8e-176 tktA 2.2.1.1 G Transketolase, pyrimidine binding domain
CFOOKOKI_00351 3.7e-263 glpK_1 2.7.1.30 F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
CFOOKOKI_00352 0.0 pepO 3.4.24.71 O Peptidase family M13
CFOOKOKI_00353 0.0 XK27_06780 V ABC transporter permease
CFOOKOKI_00354 2.3e-85 XK27_06785 V ABC transporter, ATP-binding protein
CFOOKOKI_00355 2.8e-18 XK27_06785 V ABC transporter, ATP-binding protein
CFOOKOKI_00356 4.5e-107 alkD L DNA alkylation repair enzyme
CFOOKOKI_00357 3.5e-205 M Glycosyl transferases group 1
CFOOKOKI_00358 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CFOOKOKI_00359 5.9e-105 pncA Q Isochorismatase family
CFOOKOKI_00360 6.2e-91 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CFOOKOKI_00361 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
CFOOKOKI_00362 2.4e-206 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
CFOOKOKI_00363 2.3e-232 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
CFOOKOKI_00364 1.1e-178 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
CFOOKOKI_00365 1.1e-92 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CFOOKOKI_00366 1.1e-167 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
CFOOKOKI_00367 5.4e-127 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
CFOOKOKI_00368 1.2e-117 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CFOOKOKI_00369 1.4e-300 I Protein of unknown function (DUF2974)
CFOOKOKI_00370 8.9e-150 yxeH S hydrolase
CFOOKOKI_00371 1.8e-174 XK27_05540 S DUF218 domain
CFOOKOKI_00372 2.1e-49 ybjQ S Belongs to the UPF0145 family
CFOOKOKI_00373 4e-95
CFOOKOKI_00374 4.1e-264 frc 2.8.3.16 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
CFOOKOKI_00375 0.0 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
CFOOKOKI_00376 1.2e-190 yfdV S Membrane transport protein
CFOOKOKI_00377 1.6e-39
CFOOKOKI_00378 3.7e-67 S Putative adhesin
CFOOKOKI_00379 2.1e-79
CFOOKOKI_00380 1.1e-31 hxlR K Transcriptional regulator, HxlR family
CFOOKOKI_00381 1.4e-78 XK27_02070 S Nitroreductase family
CFOOKOKI_00382 2.4e-141 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
CFOOKOKI_00383 1.5e-282 pipD E Dipeptidase
CFOOKOKI_00384 5e-229 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CFOOKOKI_00385 2.1e-177 ABC-SBP S ABC transporter
CFOOKOKI_00386 3.5e-139 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
CFOOKOKI_00387 2.6e-135 XK27_08845 S ABC transporter, ATP-binding protein
CFOOKOKI_00388 3.9e-298 ybeC E amino acid
CFOOKOKI_00389 8e-41 rpmE2 J Ribosomal protein L31
CFOOKOKI_00390 1.6e-260 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
CFOOKOKI_00391 6.5e-268 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
CFOOKOKI_00392 5.9e-61 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
CFOOKOKI_00393 2.7e-213 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CFOOKOKI_00394 1.3e-122 S (CBS) domain
CFOOKOKI_00395 3.6e-182 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
CFOOKOKI_00396 4.3e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
CFOOKOKI_00397 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CFOOKOKI_00398 5.4e-34 yabO J S4 domain protein
CFOOKOKI_00399 4e-60 divIC D Septum formation initiator
CFOOKOKI_00400 7.1e-59 yabR J S1 RNA binding domain
CFOOKOKI_00401 1.1e-242 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
CFOOKOKI_00402 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CFOOKOKI_00403 0.0 S membrane
CFOOKOKI_00404 0.0 S membrane
CFOOKOKI_00405 2.7e-160 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CFOOKOKI_00406 3.4e-191 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CFOOKOKI_00407 1.7e-298 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
CFOOKOKI_00408 1.6e-08
CFOOKOKI_00410 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
CFOOKOKI_00411 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CFOOKOKI_00412 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CFOOKOKI_00413 1.3e-106 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
CFOOKOKI_00414 3.5e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CFOOKOKI_00415 1e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
CFOOKOKI_00416 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CFOOKOKI_00417 5.8e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
CFOOKOKI_00418 1.7e-111 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CFOOKOKI_00419 1e-105 rplD J Forms part of the polypeptide exit tunnel
CFOOKOKI_00420 1.7e-45 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
CFOOKOKI_00421 1.6e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CFOOKOKI_00422 5e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CFOOKOKI_00423 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CFOOKOKI_00424 7.2e-121 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CFOOKOKI_00425 6.6e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CFOOKOKI_00426 2.2e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
CFOOKOKI_00427 7.7e-42 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CFOOKOKI_00428 5.6e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CFOOKOKI_00429 1.2e-33 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CFOOKOKI_00430 7.2e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CFOOKOKI_00431 2.3e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CFOOKOKI_00432 2.1e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CFOOKOKI_00433 2.9e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CFOOKOKI_00434 1.5e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CFOOKOKI_00435 1.9e-76 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CFOOKOKI_00436 1.4e-23 rpmD J Ribosomal protein L30
CFOOKOKI_00437 1.3e-70 rplO J Binds to the 23S rRNA
CFOOKOKI_00438 4.5e-236 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
CFOOKOKI_00439 4.5e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
CFOOKOKI_00440 1.4e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CFOOKOKI_00441 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
CFOOKOKI_00442 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CFOOKOKI_00443 2.6e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CFOOKOKI_00444 9.6e-172 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CFOOKOKI_00445 7.4e-62 rplQ J Ribosomal protein L17
CFOOKOKI_00446 4.3e-155 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CFOOKOKI_00447 4.4e-163 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CFOOKOKI_00448 1.3e-140 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CFOOKOKI_00449 9.6e-149 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
CFOOKOKI_00450 5e-78 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CFOOKOKI_00451 1.5e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
CFOOKOKI_00452 2.9e-182 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CFOOKOKI_00453 4.1e-127 cobB K Sir2 family
CFOOKOKI_00454 7.9e-117 GM NAD(P)H-binding
CFOOKOKI_00455 5.5e-198 S membrane
CFOOKOKI_00456 8.9e-99 K Transcriptional regulator C-terminal region
CFOOKOKI_00457 1.5e-150 1.6.5.2 GM NmrA-like family
CFOOKOKI_00458 5.5e-109 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
CFOOKOKI_00459 1.1e-129 pgm3 G Belongs to the phosphoglycerate mutase family
CFOOKOKI_00460 4.5e-52 K Transcriptional regulator, ArsR family
CFOOKOKI_00461 2.9e-154 czcD P cation diffusion facilitator family transporter
CFOOKOKI_00462 2e-34
CFOOKOKI_00463 5.8e-12
CFOOKOKI_00464 3.1e-124 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CFOOKOKI_00465 4.4e-185 S AAA domain
CFOOKOKI_00466 0.0 UW LPXTG-motif cell wall anchor domain protein
CFOOKOKI_00467 4e-306 gadC E Contains amino acid permease domain
CFOOKOKI_00468 8.3e-213 secY2 U Part of the accessory SecA2 SecY2 system specifically required for export of
CFOOKOKI_00469 3.3e-291 asp1 S Accessory Sec system protein Asp1
CFOOKOKI_00470 1.2e-304 asp2 3.4.11.5 S Accessory Sec system GspB-transporter
CFOOKOKI_00471 2.3e-156 asp3 S Accessory Sec secretory system ASP3
CFOOKOKI_00472 0.0 secA2 U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
CFOOKOKI_00473 3.6e-293 gtf1 2.4.1.52 GT4 M An N-acetylglucosaminyl transferase that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon
CFOOKOKI_00474 4.3e-258 gtf2 M A stabilizing protein that is part of the accessory SecA2 SecY2 system specifically required to export serine-rich repeat cell wall proteins usually encoded upstream in the same operon. Stabilizes the glycosylation activity of Gtf1
CFOOKOKI_00475 6.1e-169 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
CFOOKOKI_00476 3.8e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
CFOOKOKI_00477 2.8e-137 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CFOOKOKI_00478 6.2e-63 yodB K Transcriptional regulator, HxlR family
CFOOKOKI_00479 4.9e-201 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CFOOKOKI_00480 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
CFOOKOKI_00481 3.2e-203 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CFOOKOKI_00482 4e-65 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CFOOKOKI_00483 0.0 S membrane
CFOOKOKI_00484 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
CFOOKOKI_00485 7.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
CFOOKOKI_00486 7.4e-95 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CFOOKOKI_00487 4e-119 gluP 3.4.21.105 S Rhomboid family
CFOOKOKI_00488 7.9e-35 yqgQ S Bacterial protein of unknown function (DUF910)
CFOOKOKI_00489 5.1e-58 yqhL P Rhodanese-like protein
CFOOKOKI_00490 8.1e-19 S Protein of unknown function (DUF3042)
CFOOKOKI_00491 5.5e-164 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CFOOKOKI_00492 9.2e-261 glnA 6.3.1.2 E glutamine synthetase
CFOOKOKI_00493 3.7e-205 EGP Major facilitator Superfamily
CFOOKOKI_00494 1.1e-152 S haloacid dehalogenase-like hydrolase
CFOOKOKI_00496 1.1e-180 D Alpha beta
CFOOKOKI_00497 1.4e-217 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
CFOOKOKI_00498 1.9e-220 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
CFOOKOKI_00499 3.2e-217 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
CFOOKOKI_00500 5.6e-261 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CFOOKOKI_00501 3.5e-146 recX 2.4.1.337 GT4 S Regulatory protein RecX
CFOOKOKI_00502 6.6e-13 ygaC J Belongs to the UPF0374 family
CFOOKOKI_00503 4e-65 ygaC J Belongs to the UPF0374 family
CFOOKOKI_00504 1.8e-89
CFOOKOKI_00505 3.7e-76
CFOOKOKI_00506 3.6e-157 hlyX S Transporter associated domain
CFOOKOKI_00507 1.1e-302 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CFOOKOKI_00508 1.1e-43 XK27_09445 S Domain of unknown function (DUF1827)
CFOOKOKI_00509 0.0 clpE O Belongs to the ClpA ClpB family
CFOOKOKI_00510 5.9e-25
CFOOKOKI_00511 4.2e-40 ptsH G phosphocarrier protein HPR
CFOOKOKI_00512 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CFOOKOKI_00513 1e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
CFOOKOKI_00514 5.5e-118 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
CFOOKOKI_00515 3.1e-164 coiA 3.6.4.12 S Competence protein
CFOOKOKI_00516 3.7e-108 yjbH Q Thioredoxin
CFOOKOKI_00517 1.9e-112 yjbK S CYTH
CFOOKOKI_00518 5.2e-113 yjbM 2.7.6.5 S RelA SpoT domain protein
CFOOKOKI_00519 2.5e-152 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CFOOKOKI_00520 3.9e-170 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
CFOOKOKI_00521 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
CFOOKOKI_00522 6.5e-237 N Uncharacterized conserved protein (DUF2075)
CFOOKOKI_00523 1.4e-197 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
CFOOKOKI_00524 1.1e-65 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
CFOOKOKI_00525 6.1e-208 yubA S AI-2E family transporter
CFOOKOKI_00526 4.6e-105 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
CFOOKOKI_00527 1.7e-75 WQ51_03320 S Protein of unknown function (DUF1149)
CFOOKOKI_00528 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
CFOOKOKI_00529 3.2e-228 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
CFOOKOKI_00530 1.8e-231 S Peptidase M16
CFOOKOKI_00531 3.7e-131 IQ Enoyl-(Acyl carrier protein) reductase
CFOOKOKI_00532 2.6e-125 ymfM S Helix-turn-helix domain
CFOOKOKI_00533 1.4e-96 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CFOOKOKI_00534 3.5e-194 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CFOOKOKI_00535 6.9e-194 rny S Endoribonuclease that initiates mRNA decay
CFOOKOKI_00536 1.6e-192 tagO 2.7.8.33, 2.7.8.35 M transferase
CFOOKOKI_00537 4.3e-118 yvyE 3.4.13.9 S YigZ family
CFOOKOKI_00538 3.5e-227 comFA L Helicase C-terminal domain protein
CFOOKOKI_00539 6.7e-127 comFC S Competence protein
CFOOKOKI_00540 1.3e-96 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CFOOKOKI_00541 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
CFOOKOKI_00542 3.4e-183 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CFOOKOKI_00543 7.6e-24
CFOOKOKI_00544 3e-173 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CFOOKOKI_00545 1.2e-157 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CFOOKOKI_00546 3.3e-186 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
CFOOKOKI_00547 1.2e-174 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
CFOOKOKI_00548 2.4e-157 lacR K Transcriptional regulator
CFOOKOKI_00550 6.4e-188 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
CFOOKOKI_00551 6.4e-255 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
CFOOKOKI_00552 4.7e-161 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
CFOOKOKI_00553 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
CFOOKOKI_00554 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
CFOOKOKI_00555 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
CFOOKOKI_00556 8.1e-91 S Short repeat of unknown function (DUF308)
CFOOKOKI_00557 1.6e-160 rapZ S Displays ATPase and GTPase activities
CFOOKOKI_00558 5.8e-194 ybhK S Required for morphogenesis under gluconeogenic growth conditions
CFOOKOKI_00559 6.2e-171 whiA K May be required for sporulation
CFOOKOKI_00560 2.1e-100 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
CFOOKOKI_00561 1.8e-278 ycaM E amino acid
CFOOKOKI_00563 1.4e-187 cggR K Putative sugar-binding domain
CFOOKOKI_00564 3.2e-189 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
CFOOKOKI_00565 3.5e-227 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
CFOOKOKI_00566 1.1e-141 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
CFOOKOKI_00567 3.1e-245 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CFOOKOKI_00568 1.9e-28 secG U Preprotein translocase
CFOOKOKI_00569 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
CFOOKOKI_00570 8.7e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
CFOOKOKI_00571 6.6e-107 3.2.2.20 K acetyltransferase
CFOOKOKI_00572 1.2e-76
CFOOKOKI_00573 4.9e-93
CFOOKOKI_00574 3.4e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
CFOOKOKI_00575 2.8e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CFOOKOKI_00576 8.4e-179 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
CFOOKOKI_00577 3.3e-83 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
CFOOKOKI_00578 9.8e-36 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
CFOOKOKI_00579 9e-192 oppD P Belongs to the ABC transporter superfamily
CFOOKOKI_00580 4.6e-177 oppF P Belongs to the ABC transporter superfamily
CFOOKOKI_00581 1.6e-177 oppB P ABC transporter permease
CFOOKOKI_00582 1.1e-161 oppC P Binding-protein-dependent transport system inner membrane component
CFOOKOKI_00583 0.0 oppA E ABC transporter substrate-binding protein
CFOOKOKI_00584 2.7e-123 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
CFOOKOKI_00585 0.0 smc D Required for chromosome condensation and partitioning
CFOOKOKI_00586 5e-166 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
CFOOKOKI_00587 1.4e-286 pipD E Dipeptidase
CFOOKOKI_00588 4.9e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
CFOOKOKI_00589 3.8e-228 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CFOOKOKI_00590 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
CFOOKOKI_00591 3.1e-95 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CFOOKOKI_00592 1.7e-136 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
CFOOKOKI_00593 1e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
CFOOKOKI_00594 2.1e-117 lepB 3.4.21.89 U Belongs to the peptidase S26 family
CFOOKOKI_00595 1.7e-72 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
CFOOKOKI_00596 2.1e-117 ung2 3.2.2.27 L Uracil-DNA glycosylase
CFOOKOKI_00597 1e-113 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CFOOKOKI_00598 1.1e-34 ynzC S UPF0291 protein
CFOOKOKI_00599 5.6e-30 yneF S Uncharacterised protein family (UPF0154)
CFOOKOKI_00600 0.0 mdlA V ABC transporter
CFOOKOKI_00601 1.4e-283 mdlB V ABC transporter
CFOOKOKI_00602 1.5e-230 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
CFOOKOKI_00603 2.6e-117 plsC 2.3.1.51 I Acyltransferase
CFOOKOKI_00604 2.2e-193 yabB 2.1.1.223 L Methyltransferase small domain
CFOOKOKI_00605 5.8e-138 rpsB J Belongs to the universal ribosomal protein uS2 family
CFOOKOKI_00606 9.1e-184 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CFOOKOKI_00607 1.8e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
CFOOKOKI_00608 2.6e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
CFOOKOKI_00609 8.5e-136 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CFOOKOKI_00610 1.5e-138 cdsA 2.7.7.41 S Belongs to the CDS family
CFOOKOKI_00611 7.1e-231 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
CFOOKOKI_00612 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
CFOOKOKI_00613 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CFOOKOKI_00614 4.7e-82 rimP J Required for maturation of 30S ribosomal subunits
CFOOKOKI_00615 1.4e-218 nusA K Participates in both transcription termination and antitermination
CFOOKOKI_00616 1.5e-46 ylxR K Protein of unknown function (DUF448)
CFOOKOKI_00617 7.1e-47 rplGA J ribosomal protein
CFOOKOKI_00618 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CFOOKOKI_00619 6e-61 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CFOOKOKI_00620 2.3e-167 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CFOOKOKI_00621 7.6e-177 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
CFOOKOKI_00622 1.9e-278 lsa S ABC transporter
CFOOKOKI_00623 5.7e-96 S GyrI-like small molecule binding domain
CFOOKOKI_00624 2.5e-192 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
CFOOKOKI_00625 8.5e-78 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CFOOKOKI_00626 0.0 dnaK O Heat shock 70 kDa protein
CFOOKOKI_00627 5.7e-174 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
CFOOKOKI_00628 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
CFOOKOKI_00629 7.1e-124 srtA 3.4.22.70 M sortase family
CFOOKOKI_00630 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
CFOOKOKI_00631 4.8e-96 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CFOOKOKI_00632 1.5e-275 yjeM E Amino Acid
CFOOKOKI_00633 9.9e-280 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CFOOKOKI_00634 1.4e-186 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CFOOKOKI_00635 2.5e-94 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CFOOKOKI_00636 1.8e-207 G Major Facilitator
CFOOKOKI_00637 0.0 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
CFOOKOKI_00638 4.3e-155 lysR5 K LysR substrate binding domain
CFOOKOKI_00640 2.2e-102 3.6.1.27 I Acid phosphatase homologues
CFOOKOKI_00641 6.2e-246 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CFOOKOKI_00642 3.7e-18 S Sugar efflux transporter for intercellular exchange
CFOOKOKI_00643 1.5e-305 ybiT S ABC transporter, ATP-binding protein
CFOOKOKI_00644 6.7e-192 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
CFOOKOKI_00645 2.3e-48 K Helix-turn-helix domain
CFOOKOKI_00646 2.3e-140 F DNA/RNA non-specific endonuclease
CFOOKOKI_00647 3.2e-55 L nuclease
CFOOKOKI_00648 6.7e-156 metQ1 P Belongs to the nlpA lipoprotein family
CFOOKOKI_00649 2.9e-185 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CFOOKOKI_00650 1.4e-66 metI P ABC transporter permease
CFOOKOKI_00651 1.2e-266 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
CFOOKOKI_00652 9.8e-258 frdC 1.3.5.4 C FAD binding domain
CFOOKOKI_00653 9.8e-169 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
CFOOKOKI_00654 2.8e-244 yjjP S Putative threonine/serine exporter
CFOOKOKI_00655 3.2e-189 ansA 3.5.1.1 EJ L-asparaginase, type I
CFOOKOKI_00656 0.0 aha1 P E1-E2 ATPase
CFOOKOKI_00657 2.8e-307 S Bacterial membrane protein, YfhO
CFOOKOKI_00658 8.2e-160 EG EamA-like transporter family
CFOOKOKI_00659 5.5e-71 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
CFOOKOKI_00660 0.0 fhaB M Rib/alpha-like repeat
CFOOKOKI_00661 1.1e-101 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CFOOKOKI_00662 1.9e-163 coaA 2.7.1.33 F Pantothenic acid kinase
CFOOKOKI_00663 5.8e-103 E GDSL-like Lipase/Acylhydrolase
CFOOKOKI_00664 3.3e-119 yvpB S Peptidase_C39 like family
CFOOKOKI_00665 0.0 helD 3.6.4.12 L DNA helicase
CFOOKOKI_00666 5.1e-116 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
CFOOKOKI_00668 0.0 3.6.3.8 P ATPase, P-type (transporting), HAD superfamily, subfamily IC
CFOOKOKI_00669 2.1e-143 rpiR1 K Helix-turn-helix domain, rpiR family
CFOOKOKI_00670 3.1e-127 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
CFOOKOKI_00671 0.0 ptsG 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
CFOOKOKI_00672 8.4e-150 xth 3.1.11.2 L exodeoxyribonuclease III
CFOOKOKI_00673 1.3e-52
CFOOKOKI_00674 2.8e-26
CFOOKOKI_00675 1.8e-124 pgm3 G Phosphoglycerate mutase family
CFOOKOKI_00676 0.0 V FtsX-like permease family
CFOOKOKI_00677 2.2e-134 cysA V ABC transporter, ATP-binding protein
CFOOKOKI_00678 7.6e-277 E amino acid
CFOOKOKI_00679 2.3e-229 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CFOOKOKI_00680 4.5e-230 S Putative peptidoglycan binding domain
CFOOKOKI_00681 1.1e-114 M NlpC P60 family protein
CFOOKOKI_00682 6e-97 gmk2 2.7.4.8 F Guanylate kinase
CFOOKOKI_00683 5.3e-44
CFOOKOKI_00684 1.3e-266 S O-antigen ligase like membrane protein
CFOOKOKI_00685 2.4e-110
CFOOKOKI_00686 6.5e-81 nrdI F Belongs to the NrdI family
CFOOKOKI_00687 6.4e-176 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CFOOKOKI_00688 2.6e-80
CFOOKOKI_00689 4.7e-60 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
CFOOKOKI_00690 8.9e-40
CFOOKOKI_00691 2.8e-79 S Threonine/Serine exporter, ThrE
CFOOKOKI_00692 1.9e-136 thrE S Putative threonine/serine exporter
CFOOKOKI_00693 4.3e-278 S ABC transporter
CFOOKOKI_00694 4.3e-62
CFOOKOKI_00695 6.9e-38
CFOOKOKI_00696 1.4e-209 brpA K Cell envelope-like function transcriptional attenuator common domain protein
CFOOKOKI_00697 0.0 pepF E oligoendopeptidase F
CFOOKOKI_00698 6.5e-255 lctP C L-lactate permease
CFOOKOKI_00699 8.7e-134 znuB U ABC 3 transport family
CFOOKOKI_00700 1.4e-116 fhuC P ABC transporter
CFOOKOKI_00701 1.3e-154 psaA P Belongs to the bacterial solute-binding protein 9 family
CFOOKOKI_00702 2.1e-42 K helix_turn_helix, Arsenical Resistance Operon Repressor
CFOOKOKI_00703 4e-139 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
CFOOKOKI_00704 2.9e-277 2.7.7.7 M domain protein
CFOOKOKI_00705 0.0 2.7.7.7 M domain protein
CFOOKOKI_00706 0.0 fruA 2.7.1.200, 2.7.1.202 GT Phosphotransferase System
CFOOKOKI_00707 1.2e-166 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
CFOOKOKI_00708 1.4e-136 fruR K DeoR C terminal sensor domain
CFOOKOKI_00709 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
CFOOKOKI_00710 1.7e-221 natB CP ABC-2 family transporter protein
CFOOKOKI_00711 7.5e-166 natA S ABC transporter, ATP-binding protein
CFOOKOKI_00712 1.4e-144 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
CFOOKOKI_00713 7.7e-307 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CFOOKOKI_00714 1.2e-200 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
CFOOKOKI_00715 7.4e-121 K response regulator
CFOOKOKI_00716 0.0 V ABC transporter
CFOOKOKI_00717 2.1e-297 V ABC transporter, ATP-binding protein
CFOOKOKI_00718 1.6e-130 XK27_01040 S Protein of unknown function (DUF1129)
CFOOKOKI_00719 2e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
CFOOKOKI_00720 1.9e-42 yyzM S Bacterial protein of unknown function (DUF951)
CFOOKOKI_00721 2.2e-154 spo0J K Belongs to the ParB family
CFOOKOKI_00722 3.3e-138 soj D Sporulation initiation inhibitor
CFOOKOKI_00723 2.2e-154 noc K Belongs to the ParB family
CFOOKOKI_00724 2.8e-131 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
CFOOKOKI_00725 8.4e-96 cvpA S Colicin V production protein
CFOOKOKI_00726 5.5e-180 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
CFOOKOKI_00727 5.7e-149 3.1.3.48 T Tyrosine phosphatase family
CFOOKOKI_00728 3.7e-201 4.2.1.126 S Bacterial protein of unknown function (DUF871)
CFOOKOKI_00729 1.4e-98 azr 1.5.1.36 S NADPH-dependent FMN reductase
CFOOKOKI_00730 2.2e-96 nqr 1.5.1.36 S reductase
CFOOKOKI_00731 5.3e-21
CFOOKOKI_00734 8.1e-28 S YoeB-like toxin of bacterial type II toxin-antitoxin system
CFOOKOKI_00735 1.5e-21 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
CFOOKOKI_00736 9.3e-09 3.4.21.88 KT Peptidase S24-like
CFOOKOKI_00737 4.7e-07 cro K Helix-turn-helix XRE-family like proteins
CFOOKOKI_00739 5.5e-36 ybl78 L DnaD domain protein
CFOOKOKI_00745 3.3e-18 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
CFOOKOKI_00749 8.2e-60 endA F DNA RNA non-specific endonuclease
CFOOKOKI_00750 9.9e-19 S TPM domain
CFOOKOKI_00752 5.7e-16 S TPM domain
CFOOKOKI_00753 2.4e-40 lemA S LemA family
CFOOKOKI_00766 3.2e-08 yefM 2.3.1.15 D Antitoxin component of a toxin-antitoxin (TA) module
CFOOKOKI_00773 9.7e-12 D nuclear chromosome segregation
CFOOKOKI_00775 1.4e-31 3.4.22.70 M Sortase family
CFOOKOKI_00776 3.6e-84 M Gram-positive pilin backbone subunit 2, Cna-B-like domain
CFOOKOKI_00777 3e-44 3.4.22.70 M hmm tigr01076
CFOOKOKI_00782 2.2e-131 U TraM recognition site of TraD and TraG
CFOOKOKI_00783 6.4e-16 I mechanosensitive ion channel activity
CFOOKOKI_00785 1.3e-06
CFOOKOKI_00786 6.5e-125 trsE S COG0433 Predicted ATPase
CFOOKOKI_00787 2.7e-40 M Prophage endopeptidase tail
CFOOKOKI_00790 4.9e-07 CO Thioredoxin
CFOOKOKI_00791 7.6e-09
CFOOKOKI_00794 8.3e-49 S COG0790 FOG TPR repeat, SEL1 subfamily
CFOOKOKI_00798 2.4e-45
CFOOKOKI_00799 3.9e-49 L Protein of unknown function (DUF3991)
CFOOKOKI_00800 6.3e-148 topA2 5.99.1.2 L This gene contains a nucleotide ambiguity which may be the result of a sequencing error
CFOOKOKI_00804 5e-182 3.2.1.26, 3.2.1.65 GH32 G Belongs to the glycosyl hydrolase 32 family
CFOOKOKI_00805 2.7e-18 L Psort location Cytoplasmic, score
CFOOKOKI_00811 1.1e-24 S PemK-like, MazF-like toxin of type II toxin-antitoxin system
CFOOKOKI_00812 1.1e-11
CFOOKOKI_00813 1.1e-75 L Resolvase, N terminal domain
CFOOKOKI_00814 6.5e-76 S Fic/DOC family
CFOOKOKI_00816 1.3e-17 O Preprotein translocase subunit SecB
CFOOKOKI_00820 4.7e-39 L Initiator Replication protein
CFOOKOKI_00822 4.1e-63 D CobQ CobB MinD ParA nucleotide binding domain protein
CFOOKOKI_00823 1e-09 E Zn peptidase
CFOOKOKI_00824 3.5e-09 E Zn peptidase
CFOOKOKI_00825 7.5e-78 S KAP family P-loop domain
CFOOKOKI_00826 1.8e-21 lytB 3.2.1.96 M Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
CFOOKOKI_00828 1e-154 caiT U Belongs to the BCCT transporter (TC 2.A.15) family
CFOOKOKI_00829 3.2e-79 M Nucleotidyl transferase
CFOOKOKI_00830 1.6e-196 licA 2.7.1.89 M Nucleotidyl transferase
CFOOKOKI_00831 1.1e-08 S dextransucrase activity
CFOOKOKI_00833 1e-52 M LicD family
CFOOKOKI_00834 8.8e-135 S Psort location CytoplasmicMembrane, score 9.99
CFOOKOKI_00835 5.3e-119 epsI GM polysaccharide biosynthetic process
CFOOKOKI_00836 7.1e-08 S O-antigen ligase like membrane protein
CFOOKOKI_00837 4.9e-33 2.4.1.315 GT2 M Glycosyltransferase like family 2
CFOOKOKI_00838 4.1e-24 MA20_43635 M Capsular polysaccharide synthesis protein
CFOOKOKI_00840 2.1e-50 GT4 M Glycosyl transferases group 1
CFOOKOKI_00841 1.1e-70 pssE S Glycosyltransferase family 28 C-terminal domain
CFOOKOKI_00842 6.8e-83 cpsF M Oligosaccharide biosynthesis protein Alg14 like
CFOOKOKI_00843 1.5e-118 rfbP M Bacterial sugar transferase
CFOOKOKI_00844 7.4e-138 ywqE 3.1.3.48 GM PHP domain protein
CFOOKOKI_00845 4.6e-124 ywqD 2.7.10.1 D Capsular exopolysaccharide family
CFOOKOKI_00846 9.2e-137 epsB M biosynthesis protein
CFOOKOKI_00847 1.1e-152 brpA K Cell envelope-like function transcriptional attenuator common domain protein
CFOOKOKI_00848 1.5e-80 K DNA-templated transcription, initiation
CFOOKOKI_00849 7.4e-163
CFOOKOKI_00850 3.8e-122 frnE Q DSBA-like thioredoxin domain
CFOOKOKI_00851 2.9e-211
CFOOKOKI_00852 1.5e-76 S Domain of unknown function (DUF4767)
CFOOKOKI_00853 5.7e-115 frnE Q DSBA-like thioredoxin domain
CFOOKOKI_00855 5.1e-82
CFOOKOKI_00856 3.7e-87 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CFOOKOKI_00857 1.7e-102 engB D Necessary for normal cell division and for the maintenance of normal septation
CFOOKOKI_00858 7.7e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CFOOKOKI_00859 9.5e-205 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
CFOOKOKI_00860 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CFOOKOKI_00861 1.2e-157
CFOOKOKI_00862 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CFOOKOKI_00863 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CFOOKOKI_00864 7.5e-34 rpsT J Binds directly to 16S ribosomal RNA
CFOOKOKI_00865 2.6e-175 holA 2.7.7.7 L DNA polymerase III delta subunit
CFOOKOKI_00866 0.0 comEC S Competence protein ComEC
CFOOKOKI_00867 5.5e-84 comEA L Competence protein ComEA
CFOOKOKI_00868 2.8e-185 ylbL T Belongs to the peptidase S16 family
CFOOKOKI_00869 9.6e-86 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CFOOKOKI_00870 2.5e-95 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
CFOOKOKI_00871 7.4e-50 ylbG S UPF0298 protein
CFOOKOKI_00872 2.3e-210 ftsW D Belongs to the SEDS family
CFOOKOKI_00873 0.0 typA T GTP-binding protein TypA
CFOOKOKI_00874 5.2e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
CFOOKOKI_00875 2.3e-34 ykzG S Belongs to the UPF0356 family
CFOOKOKI_00876 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CFOOKOKI_00877 1.4e-175 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
CFOOKOKI_00878 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
CFOOKOKI_00879 4.3e-115 S Repeat protein
CFOOKOKI_00880 8.9e-124 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
CFOOKOKI_00881 4.8e-218 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
CFOOKOKI_00882 9.6e-58 XK27_04120 S Putative amino acid metabolism
CFOOKOKI_00883 1.6e-213 iscS 2.8.1.7 E Aminotransferase class V
CFOOKOKI_00884 1.1e-127 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CFOOKOKI_00885 4.9e-34
CFOOKOKI_00886 1.7e-102 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
CFOOKOKI_00887 2.3e-33 cspA K 'Cold-shock' DNA-binding domain
CFOOKOKI_00888 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CFOOKOKI_00889 3.2e-120 gpsB D DivIVA domain protein
CFOOKOKI_00890 2.4e-147 ylmH S S4 domain protein
CFOOKOKI_00891 1.2e-27 yggT S YGGT family
CFOOKOKI_00892 1.3e-62 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
CFOOKOKI_00893 1.1e-243 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CFOOKOKI_00894 6e-239 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
CFOOKOKI_00895 4e-153 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
CFOOKOKI_00896 5.2e-209 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CFOOKOKI_00897 2.8e-260 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CFOOKOKI_00898 5.4e-178 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CFOOKOKI_00899 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
CFOOKOKI_00900 4.8e-55 ftsL D Cell division protein FtsL
CFOOKOKI_00901 1.1e-175 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
CFOOKOKI_00902 4.1e-77 mraZ K Belongs to the MraZ family
CFOOKOKI_00903 2.7e-52 S Protein of unknown function (DUF3397)
CFOOKOKI_00904 2.7e-46
CFOOKOKI_00906 2.3e-93 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
CFOOKOKI_00907 2.3e-119 yfeJ 6.3.5.2 F Glutamine amidotransferase class-I
CFOOKOKI_00908 2e-104 ylbE GM NAD(P)H-binding
CFOOKOKI_00909 3.6e-79 yebR 1.8.4.14 T GAF domain-containing protein
CFOOKOKI_00910 5.4e-175 yfeO P Voltage gated chloride channel
CFOOKOKI_00911 2.9e-187 S Bacteriocin helveticin-J
CFOOKOKI_00912 1.2e-92 tag 3.2.2.20 L glycosylase
CFOOKOKI_00913 4.2e-159 mleP3 S Membrane transport protein
CFOOKOKI_00914 2.4e-136 S CAAX amino terminal protease
CFOOKOKI_00915 6.3e-142 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
CFOOKOKI_00916 6e-253 emrY EGP Major facilitator Superfamily
CFOOKOKI_00917 1.4e-259 emrY EGP Major facilitator Superfamily
CFOOKOKI_00918 3.4e-76 2.3.1.128 K acetyltransferase
CFOOKOKI_00919 1.1e-209 L Putative transposase DNA-binding domain
CFOOKOKI_00920 8.4e-145 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
CFOOKOKI_00921 2.3e-101 yagU S Protein of unknown function (DUF1440)
CFOOKOKI_00922 9.2e-147 S hydrolase
CFOOKOKI_00923 3.6e-154 K Transcriptional regulator
CFOOKOKI_00924 5.6e-242 pyrP F Permease
CFOOKOKI_00925 6e-132 lacR K DeoR C terminal sensor domain
CFOOKOKI_00926 5.1e-72 lacA 5.3.1.26 G Ribose/Galactose Isomerase
CFOOKOKI_00927 4.7e-105 rpiB 2.1.1.222, 2.1.1.64, 5.3.1.26, 5.3.1.6 G Ribose/Galactose Isomerase
CFOOKOKI_00928 4.3e-131 lacT K CAT RNA binding domain
CFOOKOKI_00929 4e-54 lacF 2.7.1.196, 2.7.1.205, 2.7.1.207 G PTS system, Lactose/Cellobiose specific IIA subunit
CFOOKOKI_00930 5e-299 celB 2.7.1.196, 2.7.1.205, 2.7.1.207 G Phosphotransferase system, EIIC
CFOOKOKI_00931 2.3e-278 lacG 3.2.1.85 G Belongs to the glycosyl hydrolase 1 family
CFOOKOKI_00932 3.3e-169 glsA 3.5.1.2 E Belongs to the glutaminase family
CFOOKOKI_00933 3e-74 K Helix-turn-helix domain, rpiR family
CFOOKOKI_00934 4.3e-176 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
CFOOKOKI_00935 1.4e-141 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CFOOKOKI_00936 2.8e-111 3.6.1.27 I Acid phosphatase homologues
CFOOKOKI_00937 4.6e-284 E Phospholipase B
CFOOKOKI_00938 1.2e-265 pepC 3.4.22.40 E Peptidase C1-like family
CFOOKOKI_00939 9.1e-282 gadC E Contains amino acid permease domain
CFOOKOKI_00940 6.3e-276 pipD E Peptidase family C69
CFOOKOKI_00941 1.2e-263 pepC 3.4.22.40 E Peptidase C1-like family
CFOOKOKI_00942 8.6e-309 gadC E Contains amino acid permease domain
CFOOKOKI_00943 1.3e-249 yagE E amino acid
CFOOKOKI_00944 7.4e-217 mdtG EGP Major facilitator Superfamily
CFOOKOKI_00945 4.6e-29
CFOOKOKI_00946 1.3e-67 K helix_turn_helix multiple antibiotic resistance protein
CFOOKOKI_00947 6.5e-78
CFOOKOKI_00948 6.6e-209 pepA E M42 glutamyl aminopeptidase
CFOOKOKI_00950 5.9e-112 ybbL S ABC transporter, ATP-binding protein
CFOOKOKI_00951 8.1e-129 ybbM S Uncharacterised protein family (UPF0014)
CFOOKOKI_00952 9.8e-260 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
CFOOKOKI_00953 3.7e-268 aaxC E Arginine ornithine antiporter
CFOOKOKI_00954 1e-253 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
CFOOKOKI_00955 0.0 lacA 3.2.1.23 G -beta-galactosidase
CFOOKOKI_00956 2.5e-283 dtpT U amino acid peptide transporter
CFOOKOKI_00957 2.3e-278 pipD E Peptidase family C69
CFOOKOKI_00958 1.6e-214 naiP EGP Major facilitator Superfamily
CFOOKOKI_00959 3e-156 S Alpha beta hydrolase
CFOOKOKI_00960 3.9e-67 K Transcriptional regulator, MarR family
CFOOKOKI_00961 5.9e-300 XK27_09600 V ABC transporter, ATP-binding protein
CFOOKOKI_00962 0.0 V ABC transporter transmembrane region
CFOOKOKI_00963 2.1e-146 glnH ET ABC transporter
CFOOKOKI_00964 6.8e-136 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
CFOOKOKI_00965 2e-149 glnH ET ABC transporter
CFOOKOKI_00966 2.1e-109 gluC P ABC transporter permease
CFOOKOKI_00967 5.7e-107 glnP P ABC transporter permease
CFOOKOKI_00968 4.7e-64
CFOOKOKI_00969 1.6e-74 S Putative adhesin
CFOOKOKI_00971 8.1e-114 udk 2.7.1.48 F Cytidine monophosphokinase
CFOOKOKI_00973 3.5e-204 2.7.13.3 T GHKL domain
CFOOKOKI_00974 8.6e-223 L Putative transposase DNA-binding domain
CFOOKOKI_00975 1.8e-142 K LytTr DNA-binding domain
CFOOKOKI_00976 3.1e-218 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
CFOOKOKI_00977 2.3e-279 arlS 2.7.13.3 T Histidine kinase
CFOOKOKI_00978 1.1e-130 K response regulator
CFOOKOKI_00979 4.2e-95 yceD S Uncharacterized ACR, COG1399
CFOOKOKI_00980 2.9e-218 ylbM S Belongs to the UPF0348 family
CFOOKOKI_00981 3.7e-60 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
CFOOKOKI_00982 1.5e-109 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
CFOOKOKI_00983 4.8e-119 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CFOOKOKI_00984 3e-209 yqeH S Ribosome biogenesis GTPase YqeH
CFOOKOKI_00985 4.7e-88 yqeG S HAD phosphatase, family IIIA
CFOOKOKI_00986 1.9e-189 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CFOOKOKI_00987 3e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CFOOKOKI_00988 2.4e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
CFOOKOKI_00989 4e-87 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CFOOKOKI_00990 2.7e-185 S CAAX protease self-immunity
CFOOKOKI_00991 2e-17 S CAAX protease self-immunity
CFOOKOKI_00992 1.6e-73 S Protein of unknown function (DUF3021)
CFOOKOKI_00993 1.6e-73 K LytTr DNA-binding domain
CFOOKOKI_00994 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CFOOKOKI_00995 4e-159 dnaI L Primosomal protein DnaI
CFOOKOKI_00996 6.4e-246 dnaB L Replication initiation and membrane attachment
CFOOKOKI_00997 1e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CFOOKOKI_00998 2.9e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CFOOKOKI_00999 1.1e-160 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
CFOOKOKI_01000 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CFOOKOKI_01001 2.5e-59 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
CFOOKOKI_01002 3.6e-76 K UTRA
CFOOKOKI_01003 2.2e-254 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
CFOOKOKI_01004 2.5e-86 cutC P Participates in the control of copper homeostasis
CFOOKOKI_01005 1.5e-120 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
CFOOKOKI_01006 4.7e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
CFOOKOKI_01007 4.3e-62
CFOOKOKI_01008 1e-124 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
CFOOKOKI_01009 1.1e-223 ecsB U ABC transporter
CFOOKOKI_01010 9.7e-135 ecsA V ABC transporter, ATP-binding protein
CFOOKOKI_01011 3.5e-76 hit FG Scavenger mRNA decapping enzyme C-term binding
CFOOKOKI_01012 2e-51
CFOOKOKI_01013 9.5e-24 S YtxH-like protein
CFOOKOKI_01014 2.1e-147 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
CFOOKOKI_01015 8.7e-184 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
CFOOKOKI_01016 0.0 L AAA domain
CFOOKOKI_01017 4.4e-217 yhaO L Ser Thr phosphatase family protein
CFOOKOKI_01018 9.5e-56 yheA S Belongs to the UPF0342 family
CFOOKOKI_01019 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
CFOOKOKI_01020 7.1e-158 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
CFOOKOKI_01022 0.0 GH23 S M26 IgA1-specific Metallo-endopeptidase C-terminal region
CFOOKOKI_01023 5e-27 GH23 S M26 IgA1-specific Metallo-endopeptidase C-terminal region
CFOOKOKI_01024 1.1e-44 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CFOOKOKI_01025 2.8e-94
CFOOKOKI_01026 1.1e-24 3.6.4.12 S PD-(D/E)XK nuclease family transposase
CFOOKOKI_01027 5.1e-110 neo 2.7.1.87, 2.7.1.95 F Belongs to the aminoglycoside phosphotransferase family
CFOOKOKI_01028 1.6e-196 V Beta-lactamase
CFOOKOKI_01031 1.6e-38 ung2 3.2.2.27 L Uracil-DNA glycosylase
CFOOKOKI_01032 8.1e-114 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
CFOOKOKI_01033 2.7e-94 dps P Belongs to the Dps family
CFOOKOKI_01034 7.9e-35 copZ C Heavy-metal-associated domain
CFOOKOKI_01035 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
CFOOKOKI_01036 4.2e-49
CFOOKOKI_01037 3.5e-32
CFOOKOKI_01038 6.5e-254 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CFOOKOKI_01039 2.7e-115 spaE S ABC-2 family transporter protein
CFOOKOKI_01040 2.4e-127 mutF V ABC transporter, ATP-binding protein
CFOOKOKI_01041 3.9e-238 nhaC C Na H antiporter NhaC
CFOOKOKI_01042 7.1e-158 salL 2.5.1.63, 2.5.1.94 K S-adenosyl-l-methionine hydroxide adenosyltransferase
CFOOKOKI_01043 1.9e-95 S UPF0397 protein
CFOOKOKI_01044 0.0 ykoD P ABC transporter, ATP-binding protein
CFOOKOKI_01045 1.1e-142 cbiQ P cobalt transport
CFOOKOKI_01046 3.2e-119 ybhL S Belongs to the BI1 family
CFOOKOKI_01047 0.0 GT2,GT4 M family 8
CFOOKOKI_01048 0.0 GT2,GT4 M family 8
CFOOKOKI_01049 4.5e-227 M Pfam:DUF1792
CFOOKOKI_01050 2.9e-75 M lipopolysaccharide 3-alpha-galactosyltransferase activity
CFOOKOKI_01051 4.9e-32 UW Tetratricopeptide repeat
CFOOKOKI_01052 0.0 FbpA K Fibronectin-binding protein
CFOOKOKI_01053 1.4e-63
CFOOKOKI_01054 1e-162 degV S EDD domain protein, DegV family
CFOOKOKI_01055 1e-151
CFOOKOKI_01056 1.4e-153 K Transcriptional regulator
CFOOKOKI_01057 8.3e-204 xerS L Belongs to the 'phage' integrase family
CFOOKOKI_01058 8.8e-122 yoaK S Protein of unknown function (DUF1275)
CFOOKOKI_01059 1.3e-110 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CFOOKOKI_01060 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
CFOOKOKI_01061 2.8e-171 ppaC 3.6.1.1 C inorganic pyrophosphatase
CFOOKOKI_01062 8.2e-179 K Transcriptional regulator
CFOOKOKI_01063 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
CFOOKOKI_01064 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
CFOOKOKI_01065 4.9e-114 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
CFOOKOKI_01066 4.6e-106 lacA 2.3.1.79 S Transferase hexapeptide repeat
CFOOKOKI_01067 2.5e-166 akr5f 1.1.1.346 S reductase
CFOOKOKI_01068 1.4e-156 V ATPases associated with a variety of cellular activities
CFOOKOKI_01069 4.8e-235 S ABC-2 family transporter protein
CFOOKOKI_01070 4.7e-194
CFOOKOKI_01071 4.8e-107 ybhL S Belongs to the BI1 family
CFOOKOKI_01072 1.4e-31
CFOOKOKI_01073 5.1e-170 4.1.1.45 S Amidohydrolase
CFOOKOKI_01074 1.7e-235 yrvN L AAA C-terminal domain
CFOOKOKI_01075 2.1e-14 K Transcriptional regulator
CFOOKOKI_01076 6.8e-133 C Aldo keto reductase
CFOOKOKI_01077 0.0 lmrA 3.6.3.44 V ABC transporter
CFOOKOKI_01078 1.4e-72 K helix_turn_helix multiple antibiotic resistance protein
CFOOKOKI_01079 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
CFOOKOKI_01080 3.9e-77 yphH S Cupin domain
CFOOKOKI_01081 1.5e-86 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CFOOKOKI_01082 4e-56 1.14.99.57 S Antibiotic biosynthesis monooxygenase
CFOOKOKI_01084 0.0 uvrA3 L excinuclease ABC, A subunit
CFOOKOKI_01085 9.6e-139 S PFAM Archaeal ATPase
CFOOKOKI_01086 9e-49 S PFAM Archaeal ATPase
CFOOKOKI_01087 4.9e-187 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
CFOOKOKI_01089 4.2e-138 H Nodulation protein S (NodS)
CFOOKOKI_01090 3.9e-268 mntH P H( )-stimulated, divalent metal cation uptake system
CFOOKOKI_01091 2.1e-54 yitW S Iron-sulfur cluster assembly protein
CFOOKOKI_01092 1.7e-273 sufB O assembly protein SufB
CFOOKOKI_01093 1e-78 nifU C SUF system FeS assembly protein, NifU family
CFOOKOKI_01094 1.2e-230 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CFOOKOKI_01095 2.6e-222 sufD O FeS assembly protein SufD
CFOOKOKI_01096 2.7e-143 sufC O FeS assembly ATPase SufC
CFOOKOKI_01097 1.4e-195 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CFOOKOKI_01098 1.1e-217 aspC 2.6.1.1 E Aminotransferase
CFOOKOKI_01099 8.6e-142 dapB 1.17.1.8 E Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
CFOOKOKI_01100 1.1e-175 dapA 4.3.3.7 E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
CFOOKOKI_01101 1.3e-191 hipO 3.5.1.47 E Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate
CFOOKOKI_01102 4.4e-76 dapD 2.3.1.117, 2.3.1.89 E Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
CFOOKOKI_01103 2.1e-246 lysA 4.1.1.19, 4.1.1.20 E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine
CFOOKOKI_01104 2.7e-252 lysC 2.7.2.4 E Belongs to the aspartokinase family
CFOOKOKI_01105 2.3e-184 dapF 5.1.1.7 E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
CFOOKOKI_01106 2.1e-247 brnQ U Component of the transport system for branched-chain amino acids
CFOOKOKI_01107 9.9e-63 S Putative adhesin
CFOOKOKI_01108 7.1e-82 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
CFOOKOKI_01109 2.7e-88 S Peptidase propeptide and YPEB domain
CFOOKOKI_01110 6.5e-238 T GHKL domain
CFOOKOKI_01111 9.1e-127 T Transcriptional regulatory protein, C terminal
CFOOKOKI_01112 1.3e-116 3.6.1.55 F NUDIX domain
CFOOKOKI_01113 3.7e-271 E amino acid
CFOOKOKI_01114 1.2e-171 K LysR substrate binding domain
CFOOKOKI_01115 0.0 1.3.5.4 C FAD binding domain
CFOOKOKI_01116 1.4e-243 brnQ U Component of the transport system for branched-chain amino acids
CFOOKOKI_01117 2.1e-134 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
CFOOKOKI_01118 1.6e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
CFOOKOKI_01119 1.2e-63 S Peptidase propeptide and YPEB domain
CFOOKOKI_01120 2e-185 cbh 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
CFOOKOKI_01121 4.5e-247 yhjX_2 P Major Facilitator Superfamily
CFOOKOKI_01122 5.5e-245 yhjX_2 P Major Facilitator Superfamily
CFOOKOKI_01123 2.8e-162 arbZ I Phosphate acyltransferases
CFOOKOKI_01124 1.2e-182 arbY M Glycosyl transferase family 8
CFOOKOKI_01125 1.6e-182 arbY M Glycosyl transferase family 8
CFOOKOKI_01126 1.9e-152 arbx M Glycosyl transferase family 8
CFOOKOKI_01127 4.1e-144 arbV 2.3.1.51 I Acyl-transferase
CFOOKOKI_01130 2.6e-129 K response regulator
CFOOKOKI_01131 0.0 vicK 2.7.13.3 T Histidine kinase
CFOOKOKI_01132 1.9e-250 yycH S YycH protein
CFOOKOKI_01133 6.7e-145 yycI S YycH protein
CFOOKOKI_01134 3.7e-148 vicX 3.1.26.11 S domain protein
CFOOKOKI_01135 6.4e-176 htrA 3.4.21.107 O serine protease
CFOOKOKI_01136 8.9e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CFOOKOKI_01137 5.6e-110 P Cobalt transport protein
CFOOKOKI_01138 8.2e-241 cbiO1 S ABC transporter, ATP-binding protein
CFOOKOKI_01139 7.9e-97 S ABC-type cobalt transport system, permease component
CFOOKOKI_01140 1.5e-161 K helix_turn_helix, arabinose operon control protein
CFOOKOKI_01141 4.5e-163 htpX O Belongs to the peptidase M48B family
CFOOKOKI_01142 1.6e-89 lemA S LemA family
CFOOKOKI_01143 5.6e-179 ybiR P Citrate transporter
CFOOKOKI_01144 5.8e-65 S Iron-sulphur cluster biosynthesis
CFOOKOKI_01145 1.7e-16
CFOOKOKI_01146 1.7e-119
CFOOKOKI_01148 3.6e-241 ydaM M Glycosyl transferase
CFOOKOKI_01149 2.2e-199 G Glycosyl hydrolases family 8
CFOOKOKI_01150 4.5e-120 yfbR S HD containing hydrolase-like enzyme
CFOOKOKI_01151 1.3e-162 L HNH nucleases
CFOOKOKI_01152 4.4e-45
CFOOKOKI_01153 2.5e-138 glnQ E ABC transporter, ATP-binding protein
CFOOKOKI_01154 2.5e-297 glnP P ABC transporter permease
CFOOKOKI_01155 5.9e-117 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
CFOOKOKI_01156 1.7e-63 yeaO S Protein of unknown function, DUF488
CFOOKOKI_01157 3.6e-124 terC P Integral membrane protein TerC family
CFOOKOKI_01158 9.2e-87 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
CFOOKOKI_01159 1.2e-134 cobB K SIR2 family
CFOOKOKI_01160 7.5e-80
CFOOKOKI_01161 3.7e-287 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CFOOKOKI_01162 2.1e-123 yugP S Putative neutral zinc metallopeptidase
CFOOKOKI_01163 3.8e-173 S Alpha/beta hydrolase of unknown function (DUF915)
CFOOKOKI_01164 7.5e-140 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CFOOKOKI_01166 4.8e-158 ypuA S Protein of unknown function (DUF1002)
CFOOKOKI_01167 8e-154 epsV 2.7.8.12 S glycosyl transferase family 2
CFOOKOKI_01168 9.9e-123 S Alpha/beta hydrolase family
CFOOKOKI_01169 1.2e-61
CFOOKOKI_01170 4.5e-180 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CFOOKOKI_01171 1.8e-240 cycA E Amino acid permease
CFOOKOKI_01172 6.4e-114 luxT K Bacterial regulatory proteins, tetR family
CFOOKOKI_01173 2.4e-121
CFOOKOKI_01174 5.4e-265 S Cysteine-rich secretory protein family
CFOOKOKI_01175 2.4e-206 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
CFOOKOKI_01176 6.8e-77
CFOOKOKI_01177 6.7e-45
CFOOKOKI_01178 4.7e-33
CFOOKOKI_01179 6e-79 apfA 2.7.7.72, 3.6.1.61 F NUDIX domain
CFOOKOKI_01180 1.6e-142 L oxidized base lesion DNA N-glycosylase activity
CFOOKOKI_01181 1.8e-245 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CFOOKOKI_01182 4.1e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CFOOKOKI_01183 1.4e-189 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
CFOOKOKI_01184 9.1e-248 clcA P chloride
CFOOKOKI_01185 1.6e-114
CFOOKOKI_01186 1.5e-44
CFOOKOKI_01187 6.6e-190 D nuclear chromosome segregation
CFOOKOKI_01188 5.8e-194 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CFOOKOKI_01189 4.6e-94 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
CFOOKOKI_01190 2.2e-131 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
CFOOKOKI_01191 1.3e-85 folT S ECF transporter, substrate-specific component
CFOOKOKI_01192 4.9e-139 fat 3.1.2.21 I Acyl-ACP thioesterase
CFOOKOKI_01193 2.8e-154 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CFOOKOKI_01194 4.4e-58 yabA L Involved in initiation control of chromosome replication
CFOOKOKI_01195 3.8e-151 holB 2.7.7.7 L DNA polymerase III
CFOOKOKI_01196 5e-51 yaaQ S Cyclic-di-AMP receptor
CFOOKOKI_01197 1.2e-112 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CFOOKOKI_01198 9e-26 S Protein of unknown function (DUF2508)
CFOOKOKI_01199 6.9e-107 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CFOOKOKI_01200 5.9e-52 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CFOOKOKI_01201 3e-310 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CFOOKOKI_01202 7.1e-86 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
CFOOKOKI_01203 6.5e-51 S Protein conserved in bacteria
CFOOKOKI_01204 2.9e-151
CFOOKOKI_01205 3.9e-21
CFOOKOKI_01206 2.3e-113 rsmC 2.1.1.172 J Methyltransferase
CFOOKOKI_01207 2.7e-32
CFOOKOKI_01208 3.6e-128 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
CFOOKOKI_01209 9.4e-51 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
CFOOKOKI_01210 5.8e-95 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CFOOKOKI_01211 5.8e-146 aatB ET ABC transporter substrate-binding protein
CFOOKOKI_01212 1.5e-115 glnQ 3.6.3.21 E ABC transporter
CFOOKOKI_01213 7.9e-109 glnP P ABC transporter permease
CFOOKOKI_01214 3.6e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
CFOOKOKI_01215 5.3e-69 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CFOOKOKI_01216 1.5e-100 nusG K Participates in transcription elongation, termination and antitermination
CFOOKOKI_01217 3.4e-11 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
CFOOKOKI_01218 1.8e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
CFOOKOKI_01219 2.2e-188 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
CFOOKOKI_01220 1.8e-226 G Major Facilitator Superfamily
CFOOKOKI_01221 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CFOOKOKI_01222 3.7e-290 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
CFOOKOKI_01223 1.7e-34
CFOOKOKI_01224 1e-88 yvrI K sigma factor activity
CFOOKOKI_01225 2e-140 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CFOOKOKI_01226 1.3e-78 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
CFOOKOKI_01227 1.1e-272 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
CFOOKOKI_01228 1.5e-288 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CFOOKOKI_01229 7e-256 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CFOOKOKI_01230 3.3e-103 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
CFOOKOKI_01231 1.4e-187 brpA K Cell envelope-like function transcriptional attenuator common domain protein
CFOOKOKI_01232 4e-264 pepC 3.4.22.40 E Peptidase C1-like family
CFOOKOKI_01233 1.8e-195 nss M transferase activity, transferring glycosyl groups
CFOOKOKI_01234 8.1e-157 cpsJ S glycosyl transferase family 2
CFOOKOKI_01235 3.6e-28 UW Tetratricopeptide repeat
CFOOKOKI_01236 0.0 S KAP family P-loop domain
CFOOKOKI_01237 4.5e-219 KQ helix_turn_helix, mercury resistance
CFOOKOKI_01238 2.7e-207 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
CFOOKOKI_01239 3.3e-166 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CFOOKOKI_01240 9.7e-117 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
CFOOKOKI_01241 4.1e-189 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
CFOOKOKI_01242 3.2e-189 L AAA ATPase domain
CFOOKOKI_01243 2.2e-154 3.6.4.12 L ATP-dependent DNA helicase activity
CFOOKOKI_01244 2.8e-37 2.7.1.202 G phosphoenolpyruvate-dependent sugar phosphotransferase system
CFOOKOKI_01245 7.4e-150 htpX O Peptidase family M48
CFOOKOKI_01247 2.4e-57
CFOOKOKI_01248 1.7e-78 mutT 3.6.1.55 F NUDIX domain
CFOOKOKI_01249 2.1e-32
CFOOKOKI_01250 2.3e-66
CFOOKOKI_01251 6.6e-63 S Domain of unknown function DUF1828
CFOOKOKI_01252 1.7e-95 S Rib/alpha-like repeat
CFOOKOKI_01254 3.8e-246 yagE E amino acid
CFOOKOKI_01255 1.8e-116 GM NmrA-like family
CFOOKOKI_01256 7.2e-152 xerD L Phage integrase, N-terminal SAM-like domain
CFOOKOKI_01257 1.6e-90 dedA 3.1.3.1 S SNARE associated Golgi protein
CFOOKOKI_01258 2.4e-175 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
CFOOKOKI_01259 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
CFOOKOKI_01260 1.3e-240 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CFOOKOKI_01261 0.0 oatA I Acyltransferase
CFOOKOKI_01262 1.5e-177 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
CFOOKOKI_01263 1.3e-142 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
CFOOKOKI_01264 7.5e-47 yrvD S Lipopolysaccharide assembly protein A domain
CFOOKOKI_01265 1e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
CFOOKOKI_01266 1.2e-304 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
CFOOKOKI_01267 6.9e-27 S Protein of unknown function (DUF2929)
CFOOKOKI_01268 0.0 dnaE 2.7.7.7 L DNA polymerase
CFOOKOKI_01269 6.8e-181 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
CFOOKOKI_01270 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
CFOOKOKI_01271 1.2e-166 cvfB S S1 domain
CFOOKOKI_01272 1.8e-164 xerD D recombinase XerD
CFOOKOKI_01273 1.8e-62 ribT K acetyltransferase
CFOOKOKI_01274 1.1e-133 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CFOOKOKI_01275 1.8e-104 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CFOOKOKI_01276 5.9e-129 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
CFOOKOKI_01277 8e-60 M Lysin motif
CFOOKOKI_01278 3.2e-96 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CFOOKOKI_01279 1.1e-116 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
CFOOKOKI_01280 6e-219 rpsA 1.17.7.4 J Ribosomal protein S1
CFOOKOKI_01281 5.3e-245 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
CFOOKOKI_01282 6.7e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
CFOOKOKI_01283 2.3e-229 S Tetratricopeptide repeat protein
CFOOKOKI_01284 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
CFOOKOKI_01285 5.7e-36 hsdM 2.1.1.72 V type I restriction-modification system
CFOOKOKI_01286 0.0 oppA E ABC transporter substrate-binding protein
CFOOKOKI_01287 2.2e-168 2.7.1.191 G PTS system sorbose subfamily IIB component
CFOOKOKI_01288 2.2e-140 G PTS system sorbose-specific iic component
CFOOKOKI_01289 2.2e-145 G PTS system mannose/fructose/sorbose family IID component
CFOOKOKI_01290 5.4e-68
CFOOKOKI_01291 4.7e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
CFOOKOKI_01292 2e-216 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
CFOOKOKI_01293 9.6e-237 ydjN U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
CFOOKOKI_01294 3.6e-134 S PAS domain
CFOOKOKI_01295 9.8e-43 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
CFOOKOKI_01296 2.1e-85 GM domain, Protein
CFOOKOKI_01297 0.0 GM domain, Protein
CFOOKOKI_01298 5.3e-144 pnuC H nicotinamide mononucleotide transporter
CFOOKOKI_01299 2.1e-91 S PAS domain
CFOOKOKI_01300 1.6e-241 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
CFOOKOKI_01301 2e-74 S Protein of unknown function (DUF3290)
CFOOKOKI_01302 5.8e-112 yviA S Protein of unknown function (DUF421)
CFOOKOKI_01303 2.3e-150 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CFOOKOKI_01304 4e-181 dnaQ 2.7.7.7 L EXOIII
CFOOKOKI_01305 3.2e-198 ltrA S Bacterial low temperature requirement A protein (LtrA)
CFOOKOKI_01306 2.9e-156 dkg S reductase
CFOOKOKI_01307 7.6e-152 endA F DNA RNA non-specific endonuclease
CFOOKOKI_01308 3.3e-280 pipD E Dipeptidase
CFOOKOKI_01309 3.1e-198 malK P ATPases associated with a variety of cellular activities
CFOOKOKI_01310 3.6e-157 gtsB P ABC-type sugar transport systems, permease components
CFOOKOKI_01311 5e-148 gtsC P Binding-protein-dependent transport system inner membrane component
CFOOKOKI_01312 5.1e-248 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
CFOOKOKI_01313 2.5e-239 G Bacterial extracellular solute-binding protein
CFOOKOKI_01314 6.5e-39 ypaA S Protein of unknown function (DUF1304)
CFOOKOKI_01315 2.2e-76 yybA 2.3.1.57 K Transcriptional regulator
CFOOKOKI_01316 2e-86 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
CFOOKOKI_01317 2.6e-79 yjcF S Acetyltransferase (GNAT) domain
CFOOKOKI_01318 5.9e-166 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
CFOOKOKI_01319 2.4e-162 3.5.2.6 V Beta-lactamase enzyme family
CFOOKOKI_01320 2.1e-97 yobS K Bacterial regulatory proteins, tetR family
CFOOKOKI_01321 0.0 ydgH S MMPL family
CFOOKOKI_01322 5.4e-147 cof S haloacid dehalogenase-like hydrolase
CFOOKOKI_01323 1.6e-123 S SNARE associated Golgi protein
CFOOKOKI_01324 2.1e-177
CFOOKOKI_01325 1.1e-256 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
CFOOKOKI_01326 1.1e-153 hipB K Helix-turn-helix
CFOOKOKI_01327 1.7e-153 I alpha/beta hydrolase fold
CFOOKOKI_01328 5.3e-107 yjbF S SNARE associated Golgi protein
CFOOKOKI_01329 2.3e-101 J Acetyltransferase (GNAT) domain
CFOOKOKI_01330 2.5e-218 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CFOOKOKI_01332 2.4e-150 S hydrolase
CFOOKOKI_01333 2.1e-168 yegS 2.7.1.107 G Lipid kinase
CFOOKOKI_01334 6e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CFOOKOKI_01335 1.4e-270 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
CFOOKOKI_01336 3.3e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CFOOKOKI_01337 1.7e-207 camS S sex pheromone
CFOOKOKI_01338 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CFOOKOKI_01339 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
CFOOKOKI_01340 1.7e-111 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
CFOOKOKI_01341 1.5e-101 S ECF transporter, substrate-specific component
CFOOKOKI_01343 2.8e-84 ydcK S Belongs to the SprT family
CFOOKOKI_01344 1.2e-131 M Glycosyltransferase sugar-binding region containing DXD motif
CFOOKOKI_01345 6.2e-255 epsU S Polysaccharide biosynthesis protein
CFOOKOKI_01346 8.3e-226 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
CFOOKOKI_01347 0.0 pacL 3.6.3.8 P P-type ATPase
CFOOKOKI_01348 0.0 spoVK O ATPase family associated with various cellular activities (AAA)
CFOOKOKI_01349 2.8e-154 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
CFOOKOKI_01350 2.5e-283 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CFOOKOKI_01351 0.0 S Glycosyltransferase like family 2
CFOOKOKI_01352 2.7e-205 csaB M Glycosyl transferases group 1
CFOOKOKI_01353 1.6e-134 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
CFOOKOKI_01354 7.4e-70 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
CFOOKOKI_01355 3.6e-123 gntR1 K UTRA
CFOOKOKI_01356 2.7e-189
CFOOKOKI_01357 1.9e-52 P Rhodanese Homology Domain
CFOOKOKI_01360 9.9e-166 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
CFOOKOKI_01361 1.9e-36 K SIS domain
CFOOKOKI_01362 2.5e-31 yjgN S Bacterial protein of unknown function (DUF898)
CFOOKOKI_01364 3.3e-97 M LysM domain protein
CFOOKOKI_01365 3.5e-114 M LysM domain protein
CFOOKOKI_01366 3.9e-133 S Putative ABC-transporter type IV
CFOOKOKI_01367 1.5e-60 psiE S Phosphate-starvation-inducible E
CFOOKOKI_01368 2.9e-93 K acetyltransferase
CFOOKOKI_01370 2.1e-94 3.1.21.3 V Type I restriction modification DNA specificity domain
CFOOKOKI_01371 7.7e-262 hsdM 2.1.1.72 V type I restriction-modification system
CFOOKOKI_01372 0.0 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
CFOOKOKI_01373 1.3e-110 yihX 3.1.3.10, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
CFOOKOKI_01374 5.7e-54 S reductase
CFOOKOKI_01375 8.6e-12 S reductase
CFOOKOKI_01376 6.2e-112 S Protein of unknown function (DUF1211)
CFOOKOKI_01377 0.0 sprD D Domain of Unknown Function (DUF1542)
CFOOKOKI_01378 1.4e-69 K LytTr DNA-binding domain
CFOOKOKI_01379 2.6e-65 S Protein of unknown function (DUF3021)
CFOOKOKI_01380 1.1e-133 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
CFOOKOKI_01381 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
CFOOKOKI_01382 7.7e-82 XK26_02160 S Pyridoxamine 5'-phosphate oxidase
CFOOKOKI_01383 7.5e-264 lsa S ABC transporter
CFOOKOKI_01384 3.7e-177 MA20_14895 S Conserved hypothetical protein 698
CFOOKOKI_01385 7.6e-203 L Putative transposase DNA-binding domain
CFOOKOKI_01386 9.5e-72
CFOOKOKI_01388 1.2e-100 S LexA-binding, inner membrane-associated putative hydrolase
CFOOKOKI_01389 2.3e-97 K LysR substrate binding domain
CFOOKOKI_01390 1.1e-177 lacX 5.1.3.3 G Aldose 1-epimerase
CFOOKOKI_01391 8.2e-252 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CFOOKOKI_01392 4.3e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CFOOKOKI_01393 8.3e-168 xerC D Phage integrase, N-terminal SAM-like domain
CFOOKOKI_01394 1.5e-247 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
CFOOKOKI_01395 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CFOOKOKI_01396 4e-153 dprA LU DNA protecting protein DprA
CFOOKOKI_01397 1.8e-133 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CFOOKOKI_01398 1.2e-157 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CFOOKOKI_01399 1.4e-262 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
CFOOKOKI_01400 1.6e-35 yozE S Belongs to the UPF0346 family
CFOOKOKI_01401 4.7e-149 DegV S Uncharacterised protein, DegV family COG1307
CFOOKOKI_01402 5.8e-115 hlyIII S protein, hemolysin III
CFOOKOKI_01403 6e-227 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
CFOOKOKI_01404 2.5e-161 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
CFOOKOKI_01405 7e-175 S cog cog1373
CFOOKOKI_01406 5.3e-12 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
CFOOKOKI_01407 1.4e-151 mrr L restriction endonuclease
CFOOKOKI_01408 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
CFOOKOKI_01409 5.9e-106 vanZ V VanZ like family
CFOOKOKI_01410 1.9e-261 pgi 5.3.1.9 G Belongs to the GPI family
CFOOKOKI_01411 1.1e-240 EGP Major facilitator Superfamily
CFOOKOKI_01412 1.1e-69
CFOOKOKI_01415 1.1e-194 ampC V Beta-lactamase
CFOOKOKI_01416 4.9e-262 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain
CFOOKOKI_01417 5.5e-112 tdk 2.7.1.21 F thymidine kinase
CFOOKOKI_01418 1.4e-195 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CFOOKOKI_01419 4.6e-157 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
CFOOKOKI_01420 1.8e-184 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
CFOOKOKI_01421 1.5e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CFOOKOKI_01422 1.1e-127 atpB C it plays a direct role in the translocation of protons across the membrane
CFOOKOKI_01423 4.7e-26 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CFOOKOKI_01424 3.1e-52 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CFOOKOKI_01425 9.8e-92 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CFOOKOKI_01426 6.7e-284 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CFOOKOKI_01427 5.4e-170 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CFOOKOKI_01428 9.6e-248 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CFOOKOKI_01429 1.1e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
CFOOKOKI_01430 5.4e-31 ywzB S Protein of unknown function (DUF1146)
CFOOKOKI_01431 1.7e-179 mbl D Cell shape determining protein MreB Mrl
CFOOKOKI_01432 6.8e-13 S DNA-directed RNA polymerase subunit beta
CFOOKOKI_01433 2.6e-51 yidD S Could be involved in insertion of integral membrane proteins into the membrane
CFOOKOKI_01434 6.6e-34 S Protein of unknown function (DUF2969)
CFOOKOKI_01435 5.2e-223 rodA D Belongs to the SEDS family
CFOOKOKI_01436 5.2e-81 usp6 T universal stress protein
CFOOKOKI_01438 2.7e-233 rarA L recombination factor protein RarA
CFOOKOKI_01439 2.4e-83 yueI S Protein of unknown function (DUF1694)
CFOOKOKI_01440 1e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CFOOKOKI_01442 5.5e-290 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
CFOOKOKI_01443 1e-215 iscS2 2.8.1.7 E Aminotransferase class V
CFOOKOKI_01444 1.1e-228 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CFOOKOKI_01445 3.6e-123 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
CFOOKOKI_01446 7.3e-179 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
CFOOKOKI_01447 0.0 3.6.3.8 P P-type ATPase
CFOOKOKI_01448 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
CFOOKOKI_01449 5.7e-236 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
CFOOKOKI_01450 2e-123 S Haloacid dehalogenase-like hydrolase
CFOOKOKI_01451 2.1e-111 radC L DNA repair protein
CFOOKOKI_01452 2.7e-164 mreB D cell shape determining protein MreB
CFOOKOKI_01453 6.1e-141 mreC M Involved in formation and maintenance of cell shape
CFOOKOKI_01454 1.6e-94 mreD
CFOOKOKI_01455 3.6e-13 S Protein of unknown function (DUF4044)
CFOOKOKI_01456 8.3e-282 S C4-dicarboxylate anaerobic carrier
CFOOKOKI_01457 2.6e-85 dps P Belongs to the Dps family
CFOOKOKI_01458 2.4e-159 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CFOOKOKI_01459 5.7e-129 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CFOOKOKI_01460 3.1e-175 rihB 3.2.2.1 F Nucleoside
CFOOKOKI_01461 8.9e-133 gntR K UbiC transcription regulator-associated domain protein
CFOOKOKI_01462 3.4e-89 glcR K DeoR C terminal sensor domain
CFOOKOKI_01463 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
CFOOKOKI_01464 3.2e-101 C nitroreductase
CFOOKOKI_01465 5.5e-124
CFOOKOKI_01466 1.1e-237 yhdP S Transporter associated domain
CFOOKOKI_01467 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
CFOOKOKI_01468 5.2e-232 potE E amino acid
CFOOKOKI_01469 5.8e-137 M Glycosyl hydrolases family 25
CFOOKOKI_01470 2.7e-206 yfmL 3.6.4.13 L DEAD DEAH box helicase
CFOOKOKI_01471 1.1e-250 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CFOOKOKI_01474 5.5e-214 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
CFOOKOKI_01475 8.8e-87 gtcA S Teichoic acid glycosylation protein
CFOOKOKI_01476 6.5e-78 fld C Flavodoxin
CFOOKOKI_01477 1.9e-160 map 3.4.11.18 E Methionine Aminopeptidase
CFOOKOKI_01478 2.8e-160 yihY S Belongs to the UPF0761 family
CFOOKOKI_01479 1.2e-168 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
CFOOKOKI_01480 4.4e-180 E ABC transporter, ATP-binding protein
CFOOKOKI_01481 1.3e-285 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
CFOOKOKI_01482 1.1e-66 O OsmC-like protein
CFOOKOKI_01483 1.1e-112 2.7.6.5 T Region found in RelA / SpoT proteins
CFOOKOKI_01484 1.2e-115 K response regulator
CFOOKOKI_01485 4.6e-225 sptS 2.7.13.3 T Histidine kinase
CFOOKOKI_01486 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
CFOOKOKI_01487 0.0 pepN 3.4.11.2 E aminopeptidase
CFOOKOKI_01488 1.3e-38 S haloacid dehalogenase-like hydrolase
CFOOKOKI_01489 9.9e-266 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
CFOOKOKI_01490 6.3e-174
CFOOKOKI_01491 2.6e-132
CFOOKOKI_01492 9.8e-103 lepB 3.4.21.89 U Belongs to the peptidase S26 family
CFOOKOKI_01493 4.7e-22
CFOOKOKI_01494 1.5e-136
CFOOKOKI_01495 3.4e-141
CFOOKOKI_01496 4.7e-123 skfE V ATPases associated with a variety of cellular activities
CFOOKOKI_01497 3.6e-58 yvoA_1 K Transcriptional regulator, GntR family
CFOOKOKI_01498 9.2e-247 pepT 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
CFOOKOKI_01499 1.1e-149 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CFOOKOKI_01500 2.6e-121 trmK 2.1.1.217 S SAM-dependent methyltransferase
CFOOKOKI_01501 7.2e-142 cjaA ET ABC transporter substrate-binding protein
CFOOKOKI_01502 4.8e-134 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
CFOOKOKI_01503 1.3e-106 P ABC transporter permease
CFOOKOKI_01504 2.6e-115 papP P ABC transporter, permease protein
CFOOKOKI_01505 6.7e-164 S DNA/RNA non-specific endonuclease
CFOOKOKI_01506 2.8e-186 M domain protein
CFOOKOKI_01508 5.4e-92
CFOOKOKI_01509 4.7e-120
CFOOKOKI_01510 2.9e-199 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
CFOOKOKI_01511 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
CFOOKOKI_01512 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
CFOOKOKI_01513 2.7e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
CFOOKOKI_01514 5.2e-136 recO L Involved in DNA repair and RecF pathway recombination
CFOOKOKI_01515 9.6e-169 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CFOOKOKI_01516 1.4e-82 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CFOOKOKI_01517 7.3e-175 phoH T phosphate starvation-inducible protein PhoH
CFOOKOKI_01518 2.9e-33 yqeY S YqeY-like protein
CFOOKOKI_01519 1.5e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
CFOOKOKI_01520 2.5e-155 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
CFOOKOKI_01521 4.1e-50 S Iron-sulfur cluster assembly protein
CFOOKOKI_01522 1e-151 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
CFOOKOKI_01523 7.1e-121 sdaAB 4.3.1.17 E Serine dehydratase beta chain
CFOOKOKI_01524 4.5e-155 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
CFOOKOKI_01525 1.1e-101 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CFOOKOKI_01527 2.5e-309 S Predicted membrane protein (DUF2207)
CFOOKOKI_01528 6e-172 I Carboxylesterase family
CFOOKOKI_01529 1.1e-150 M domain protein
CFOOKOKI_01530 0.0 infB UW LPXTG-motif cell wall anchor domain protein
CFOOKOKI_01531 4.9e-69 3.4.22.70 M Sortase family
CFOOKOKI_01533 1e-47 K Transcriptional regulator, TetR family
CFOOKOKI_01534 3.8e-19 K Transcriptional regulator, TetR family
CFOOKOKI_01536 2.3e-256 pepC 3.4.22.40 E Peptidase C1-like family
CFOOKOKI_01537 1.6e-61 pdxH S Pyridoxamine 5'-phosphate oxidase
CFOOKOKI_01538 0.0 oppA E ABC transporter substrate-binding protein
CFOOKOKI_01539 1.9e-77 K MerR HTH family regulatory protein
CFOOKOKI_01540 2.3e-265 lmrB EGP Major facilitator Superfamily
CFOOKOKI_01541 5.3e-93 S Domain of unknown function (DUF4811)
CFOOKOKI_01542 4.8e-140 ppm1 GT2 M Glycosyl transferase family 2
CFOOKOKI_01543 3.2e-107 fic D Fic/DOC family
CFOOKOKI_01544 6.2e-70
CFOOKOKI_01545 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
CFOOKOKI_01546 7.3e-114 V ABC transporter transmembrane region
CFOOKOKI_01547 0.0 UW LPXTG-motif cell wall anchor domain protein
CFOOKOKI_01548 1.5e-117 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CFOOKOKI_01549 2.5e-144 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
CFOOKOKI_01550 3.2e-68 yslB S Protein of unknown function (DUF2507)
CFOOKOKI_01551 1.1e-52 trxA O Belongs to the thioredoxin family
CFOOKOKI_01552 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
CFOOKOKI_01553 3.9e-93 cvpA S Colicin V production protein
CFOOKOKI_01554 4.2e-39 yrzB S Belongs to the UPF0473 family
CFOOKOKI_01555 8.8e-72 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CFOOKOKI_01556 2.6e-42 yrzL S Belongs to the UPF0297 family
CFOOKOKI_01557 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CFOOKOKI_01558 6.2e-228 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
CFOOKOKI_01559 1.9e-183 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
CFOOKOKI_01560 1.2e-208 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CFOOKOKI_01561 2.2e-284 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CFOOKOKI_01562 9.4e-107 K WHG domain
CFOOKOKI_01563 6.8e-37
CFOOKOKI_01564 1e-265 pipD E Dipeptidase
CFOOKOKI_01565 4.1e-294 arbB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
CFOOKOKI_01566 0.0 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
CFOOKOKI_01567 8.7e-156 K CAT RNA binding domain
CFOOKOKI_01568 5.2e-119 devA 3.6.3.25 V ABC transporter, ATP-binding protein
CFOOKOKI_01569 6.7e-182 hrtB V ABC transporter permease
CFOOKOKI_01570 2.4e-92 ygfC K Bacterial regulatory proteins, tetR family
CFOOKOKI_01571 6.7e-110 G phosphoglycerate mutase
CFOOKOKI_01572 3.6e-114 G Phosphoglycerate mutase family
CFOOKOKI_01573 7e-141 aroD S Alpha/beta hydrolase family
CFOOKOKI_01574 6e-140 S Belongs to the UPF0246 family
CFOOKOKI_01575 8.5e-52
CFOOKOKI_01576 3.7e-128
CFOOKOKI_01577 3.9e-162 O protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CFOOKOKI_01578 1.6e-252 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CFOOKOKI_01579 0.0 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
CFOOKOKI_01580 5.4e-141 3.4.16.4, 3.5.2.6 V Beta-lactamase enzyme family
CFOOKOKI_01581 9e-153 ybbH_2 K Helix-turn-helix domain, rpiR family
CFOOKOKI_01582 4e-155 2.7.7.12 C Domain of unknown function (DUF4931)
CFOOKOKI_01583 5.6e-71 aroD 1.1.1.25, 4.2.1.10 E 3-dehydroquinate dehydratase activity
CFOOKOKI_01584 5.2e-156
CFOOKOKI_01585 2.5e-217 mdtG EGP Major facilitator Superfamily
CFOOKOKI_01586 4.9e-125 puuD S peptidase C26
CFOOKOKI_01587 5.3e-295 V ABC transporter transmembrane region
CFOOKOKI_01588 1.3e-90 ymdB S Macro domain protein
CFOOKOKI_01589 9.5e-180 V ABC-type multidrug transport system, ATPase and permease components
CFOOKOKI_01590 2.6e-198 V ABC-type multidrug transport system, ATPase and permease components
CFOOKOKI_01592 7.8e-30
CFOOKOKI_01593 0.0 scrA 2.7.1.199, 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
CFOOKOKI_01594 6.1e-298 scrB 3.2.1.26 GH32 G invertase
CFOOKOKI_01595 3e-184 scrR K Transcriptional regulator, LacI family
CFOOKOKI_01596 2.9e-142 ptp2 3.1.3.48 T Tyrosine phosphatase family
CFOOKOKI_01597 5.4e-147 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
CFOOKOKI_01598 1e-130 cobQ S glutamine amidotransferase
CFOOKOKI_01599 2.4e-256 yfnA E Amino Acid
CFOOKOKI_01600 3.5e-163 EG EamA-like transporter family
CFOOKOKI_01601 3.4e-191 asnA 6.3.1.1 F aspartate--ammonia ligase
CFOOKOKI_01602 3.1e-235 steT_1 E amino acid
CFOOKOKI_01603 6.5e-136 puuD S peptidase C26
CFOOKOKI_01604 3.5e-231 yifK E Amino acid permease
CFOOKOKI_01605 1.5e-253 yifK E Amino acid permease
CFOOKOKI_01606 1.8e-65 manO S Domain of unknown function (DUF956)
CFOOKOKI_01607 3.3e-172 manN G system, mannose fructose sorbose family IID component
CFOOKOKI_01608 1.3e-124 manY G PTS system
CFOOKOKI_01609 7.5e-183 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
CFOOKOKI_01611 1e-215 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CFOOKOKI_01612 6e-139 ykuT M mechanosensitive ion channel
CFOOKOKI_01613 1.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
CFOOKOKI_01614 8.1e-49
CFOOKOKI_01615 3.8e-212 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
CFOOKOKI_01616 9.8e-175 ccpA K catabolite control protein A
CFOOKOKI_01617 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M Penicillin binding protein transpeptidase domain
CFOOKOKI_01618 4e-275 pepV 3.5.1.18 E dipeptidase PepV
CFOOKOKI_01619 2.3e-267 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
CFOOKOKI_01620 3.3e-55
CFOOKOKI_01621 1.4e-267 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
CFOOKOKI_01622 9.3e-95 yutD S Protein of unknown function (DUF1027)
CFOOKOKI_01623 1.2e-148 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
CFOOKOKI_01624 1.5e-104 S Protein of unknown function (DUF1461)
CFOOKOKI_01625 2.7e-117 dedA S SNARE-like domain protein
CFOOKOKI_01626 1.4e-178 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
CFOOKOKI_01627 4.2e-62 yugI 5.3.1.9 J general stress protein
CFOOKOKI_01629 5e-173 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
CFOOKOKI_01630 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
CFOOKOKI_01631 3e-170 dacA 3.4.16.4 M Belongs to the peptidase S11 family
CFOOKOKI_01632 1e-148 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CFOOKOKI_01633 8.8e-136
CFOOKOKI_01634 1.5e-216 MA20_36090 S Protein of unknown function (DUF2974)
CFOOKOKI_01635 5.6e-300 ytgP S Polysaccharide biosynthesis protein
CFOOKOKI_01636 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
CFOOKOKI_01637 6.8e-116 3.6.1.27 I Acid phosphatase homologues
CFOOKOKI_01638 6.7e-35 L Helix-turn-helix domain
CFOOKOKI_01639 1.2e-101 L PFAM Integrase catalytic region
CFOOKOKI_01640 6.7e-257 qacA EGP Major facilitator Superfamily
CFOOKOKI_01641 9e-215 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CFOOKOKI_01646 1e-47
CFOOKOKI_01647 7.3e-112 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
CFOOKOKI_01648 2.3e-31 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
CFOOKOKI_01649 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CFOOKOKI_01650 2.3e-173 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CFOOKOKI_01651 4.2e-242 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CFOOKOKI_01652 7.8e-140 stp 3.1.3.16 T phosphatase
CFOOKOKI_01653 0.0 KLT serine threonine protein kinase
CFOOKOKI_01654 4.1e-164 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
CFOOKOKI_01655 4.1e-121 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
CFOOKOKI_01656 3.4e-123 thiN 2.7.6.2 H thiamine pyrophosphokinase
CFOOKOKI_01657 1.2e-25 rpmB J Belongs to the bacterial ribosomal protein bL28 family
CFOOKOKI_01658 1.4e-57 asp S Asp23 family, cell envelope-related function
CFOOKOKI_01659 3.6e-307 yloV S DAK2 domain fusion protein YloV
CFOOKOKI_01660 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CFOOKOKI_01661 1.9e-178 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
CFOOKOKI_01663 8.4e-109 phoU P Plays a role in the regulation of phosphate uptake
CFOOKOKI_01664 3.5e-140 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CFOOKOKI_01665 1.6e-146 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CFOOKOKI_01666 2.4e-156 pstA P Phosphate transport system permease protein PstA
CFOOKOKI_01667 1.2e-161 pstC P probably responsible for the translocation of the substrate across the membrane
CFOOKOKI_01668 2.1e-160 pstS P Phosphate
CFOOKOKI_01669 2.8e-96 K Acetyltransferase (GNAT) domain
CFOOKOKI_01670 3.2e-130 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
CFOOKOKI_01671 1.3e-255 glnPH2 P ABC transporter permease
CFOOKOKI_01672 3.1e-161 rssA S Phospholipase, patatin family
CFOOKOKI_01673 8.8e-212 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
CFOOKOKI_01674 0.0 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
CFOOKOKI_01676 1.8e-53 S Enterocin A Immunity
CFOOKOKI_01680 4e-226 S CAAX protease self-immunity
CFOOKOKI_01681 1.3e-45 S Enterocin A Immunity
CFOOKOKI_01683 2.4e-99 M Transport protein ComB
CFOOKOKI_01684 9.1e-34 comA V ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
CFOOKOKI_01685 8.3e-112 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
CFOOKOKI_01686 3.5e-82
CFOOKOKI_01687 2.5e-147 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
CFOOKOKI_01688 6.4e-91 S ECF-type riboflavin transporter, S component
CFOOKOKI_01689 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
CFOOKOKI_01690 1.2e-62
CFOOKOKI_01691 3.5e-12
CFOOKOKI_01692 1.2e-215 S Uncharacterized protein conserved in bacteria (DUF2325)
CFOOKOKI_01693 4.1e-150 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
CFOOKOKI_01694 7.3e-64 arsC 1.20.4.1 P Belongs to the ArsC family
CFOOKOKI_01695 2e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
CFOOKOKI_01696 2.8e-48 rpmA J Belongs to the bacterial ribosomal protein bL27 family
CFOOKOKI_01697 6.4e-199 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
CFOOKOKI_01698 1.1e-101 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CFOOKOKI_01699 8.2e-73 yqhY S Asp23 family, cell envelope-related function
CFOOKOKI_01700 3.6e-67 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CFOOKOKI_01701 9e-153 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CFOOKOKI_01702 3e-251 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CFOOKOKI_01703 1.1e-34 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CFOOKOKI_01704 1.4e-161 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
CFOOKOKI_01705 1.1e-155 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
CFOOKOKI_01706 6.7e-293 recN L May be involved in recombinational repair of damaged DNA
CFOOKOKI_01707 2.7e-272 yjcE P Sodium proton antiporter
CFOOKOKI_01708 8.9e-169 yibE S overlaps another CDS with the same product name
CFOOKOKI_01709 2.2e-118 yibF S overlaps another CDS with the same product name
CFOOKOKI_01710 4.6e-154 I alpha/beta hydrolase fold
CFOOKOKI_01711 0.0 G Belongs to the glycosyl hydrolase 31 family
CFOOKOKI_01712 3.2e-127 XK27_08435 K UTRA
CFOOKOKI_01713 2.8e-213 agaS G SIS domain
CFOOKOKI_01714 1.7e-226 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
CFOOKOKI_01715 1.3e-82 2.7.1.191 G PTS system sorbose subfamily IIB component
CFOOKOKI_01716 3.4e-129 XK27_08455 G PTS system sorbose-specific iic component
CFOOKOKI_01717 7.1e-147 manZ_1 G PTS system mannose/fructose/sorbose family IID component
CFOOKOKI_01718 7.9e-67 2.7.1.191 G PTS system fructose IIA component
CFOOKOKI_01719 6.8e-215 S zinc-ribbon domain
CFOOKOKI_01721 1.4e-141 E GDSL-like Lipase/Acylhydrolase family
CFOOKOKI_01722 1.7e-78 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
CFOOKOKI_01723 1.2e-222 patA 2.6.1.1 E Aminotransferase
CFOOKOKI_01724 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
CFOOKOKI_01725 6.2e-246 hisS 6.1.1.21 J histidyl-tRNA synthetase
CFOOKOKI_01726 3.3e-74 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
CFOOKOKI_01727 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CFOOKOKI_01728 2.4e-65
CFOOKOKI_01729 5.1e-173 prmA J Ribosomal protein L11 methyltransferase
CFOOKOKI_01730 5.3e-68 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CFOOKOKI_01731 2.6e-289 S Bacterial membrane protein, YfhO
CFOOKOKI_01732 1.2e-39 yajC U Preprotein translocase
CFOOKOKI_01733 4.3e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
CFOOKOKI_01734 9.3e-101 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
CFOOKOKI_01735 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CFOOKOKI_01736 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CFOOKOKI_01737 2.7e-76 EGP Major facilitator Superfamily
CFOOKOKI_01738 2.6e-59
CFOOKOKI_01739 0.0 nisT V ABC transporter
CFOOKOKI_01741 8.1e-114
CFOOKOKI_01742 2.7e-14 ropB K Helix-turn-helix domain
CFOOKOKI_01743 1.1e-253 1.3.5.4 C FMN_bind
CFOOKOKI_01744 7.4e-52 1.3.5.4 C FMN_bind
CFOOKOKI_01745 8.3e-24 E Pfam:DUF955
CFOOKOKI_01746 9.2e-14 S sequence-specific DNA binding
CFOOKOKI_01747 5.7e-25
CFOOKOKI_01748 8.3e-19
CFOOKOKI_01749 3.1e-33 S Domain of unknown function (DUF4417)
CFOOKOKI_01750 1.4e-130 mrr L restriction endonuclease
CFOOKOKI_01751 5.3e-09
CFOOKOKI_01752 1.2e-64 3.1.21.3 L Type I restriction modification DNA specificity domain
CFOOKOKI_01753 6.9e-154 L Belongs to the 'phage' integrase family
CFOOKOKI_01754 5.8e-54 3.1.21.3 V Type I restriction modification DNA specificity domain
CFOOKOKI_01755 6.8e-162 hsdM 2.1.1.72 V type I restriction-modification system
CFOOKOKI_01758 1e-226 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CFOOKOKI_01759 4.3e-186 ytxK 2.1.1.72 L N-6 DNA Methylase
CFOOKOKI_01760 3.9e-87 comGF U Putative Competence protein ComGF
CFOOKOKI_01761 1.7e-10
CFOOKOKI_01762 3.1e-58
CFOOKOKI_01763 1.2e-40 comGC U Required for transformation and DNA binding
CFOOKOKI_01764 1.6e-172 comGB NU type II secretion system
CFOOKOKI_01765 1.5e-180 comGA NU Type II IV secretion system protein
CFOOKOKI_01766 1.5e-132 yebC K Transcriptional regulatory protein
CFOOKOKI_01767 4e-95 S VanZ like family
CFOOKOKI_01768 1.2e-214 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CFOOKOKI_01769 1.8e-164 znuA P Belongs to the bacterial solute-binding protein 9 family
CFOOKOKI_01770 8e-148 yisY 1.11.1.10 S Alpha/beta hydrolase family
CFOOKOKI_01771 1.6e-115
CFOOKOKI_01772 1.1e-09 S Putative adhesin
CFOOKOKI_01773 1.2e-198 S Putative adhesin
CFOOKOKI_01774 1.4e-59 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CFOOKOKI_01775 6.1e-64 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CFOOKOKI_01776 5.3e-142 S Sucrose-6F-phosphate phosphohydrolase
CFOOKOKI_01777 4.5e-255 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CFOOKOKI_01778 4.2e-170 ybbR S YbbR-like protein
CFOOKOKI_01779 2.9e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CFOOKOKI_01780 2.5e-208 potD P ABC transporter
CFOOKOKI_01781 2.9e-137 potC P ABC transporter permease
CFOOKOKI_01782 1e-129 potB P ABC transporter permease
CFOOKOKI_01783 3.8e-204 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
CFOOKOKI_01784 9e-167 murB 1.3.1.98 M Cell wall formation
CFOOKOKI_01785 1.2e-99 dnaQ 2.7.7.7 L DNA polymerase III
CFOOKOKI_01806 3.4e-61
CFOOKOKI_01818 9.9e-219 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
CFOOKOKI_01819 3.5e-199 cpoA GT4 M Glycosyltransferase, group 1 family protein
CFOOKOKI_01820 1.3e-182 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CFOOKOKI_01821 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
CFOOKOKI_01822 6.3e-39 hsdR 3.1.21.3 V Subunit R is required for both nuclease and ATPase activities, but not for modification
CFOOKOKI_01824 4.4e-163 yvgN C Aldo keto reductase
CFOOKOKI_01825 5.2e-248 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
CFOOKOKI_01826 7.6e-79 S Uncharacterized protein conserved in bacteria (DUF2263)
CFOOKOKI_01827 5.1e-37 S Uncharacterized protein conserved in bacteria (DUF2263)
CFOOKOKI_01828 1.7e-190 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
CFOOKOKI_01829 2.5e-83 lhr L DEAD DEAH box helicase
CFOOKOKI_01830 0.0 lhr L DEAD DEAH box helicase
CFOOKOKI_01831 7.1e-253 P P-loop Domain of unknown function (DUF2791)
CFOOKOKI_01832 2.8e-260 S TerB-C domain
CFOOKOKI_01833 4.4e-244 G Bacterial extracellular solute-binding protein
CFOOKOKI_01834 0.0 uup S ABC transporter, ATP-binding protein
CFOOKOKI_01835 8.7e-116 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
CFOOKOKI_01836 1.8e-104 yvdD 3.2.2.10 S Belongs to the LOG family
CFOOKOKI_01837 6.7e-50 ptcB 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
CFOOKOKI_01838 2.7e-79 XK27_02470 K LytTr DNA-binding domain
CFOOKOKI_01839 4e-120 liaI S membrane
CFOOKOKI_01841 8.8e-44 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CFOOKOKI_01842 1.8e-295 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
CFOOKOKI_01843 0.0 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
CFOOKOKI_01844 4.3e-97 M Protein of unknown function (DUF3737)
CFOOKOKI_01845 1.3e-223 patB 4.4.1.8 E Aminotransferase, class I
CFOOKOKI_01846 1.8e-189 manA 5.3.1.8 G mannose-6-phosphate isomerase
CFOOKOKI_01847 6e-67 S SdpI/YhfL protein family
CFOOKOKI_01848 2e-129 K Transcriptional regulatory protein, C terminal
CFOOKOKI_01849 4.2e-267 T PhoQ Sensor
CFOOKOKI_01850 5.9e-82 ywhK S Membrane
CFOOKOKI_01851 2e-152 cylA V ABC transporter
CFOOKOKI_01852 2.2e-146 cylB V ABC-2 type transporter
CFOOKOKI_01853 2.2e-73 K LytTr DNA-binding domain
CFOOKOKI_01854 1.4e-63 S Protein of unknown function (DUF3021)
CFOOKOKI_01855 2.9e-82 XK27_09675 K Acetyltransferase (GNAT) domain
CFOOKOKI_01856 3.7e-174 1.1.1.1 C nadph quinone reductase
CFOOKOKI_01857 2.3e-78 K Transcriptional regulator
CFOOKOKI_01858 2.5e-83 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CFOOKOKI_01860 1.7e-140 K Helix-turn-helix
CFOOKOKI_01861 1.6e-111 1.6.5.2 S NADPH-dependent FMN reductase
CFOOKOKI_01862 3.9e-93 K Bacterial regulatory proteins, tetR family
CFOOKOKI_01863 5e-56 yjdF S Protein of unknown function (DUF2992)
CFOOKOKI_01864 5.7e-58 hxlR K Transcriptional regulator, HxlR family
CFOOKOKI_01865 4.1e-192 qor 1.1.1.1, 1.6.5.5 C Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily
CFOOKOKI_01866 4.7e-23 K Helix-turn-helix XRE-family like proteins
CFOOKOKI_01867 1.2e-08
CFOOKOKI_01868 4.8e-27 P (belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CFOOKOKI_01869 9.5e-94 ywhK S Membrane
CFOOKOKI_01870 8.4e-84
CFOOKOKI_01871 9.6e-152 K Helix-turn-helix XRE-family like proteins
CFOOKOKI_01872 1.9e-141 yfdE 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
CFOOKOKI_01873 3.9e-139 K LytTr DNA-binding domain
CFOOKOKI_01874 2.5e-191 2.7.13.3 T GHKL domain
CFOOKOKI_01875 2.5e-15 S the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts
CFOOKOKI_01877 6.2e-244 cycA E Amino acid permease
CFOOKOKI_01878 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
CFOOKOKI_01880 8.8e-15
CFOOKOKI_01881 2.7e-37 S Fic/DOC family
CFOOKOKI_01883 1.4e-87 S TerB-C domain
CFOOKOKI_01884 3.8e-104 4.1.1.44 S Carboxymuconolactone decarboxylase family
CFOOKOKI_01885 2.5e-71
CFOOKOKI_01886 9e-251 yfnA E Amino Acid
CFOOKOKI_01887 2.2e-90 S haloacid dehalogenase-like hydrolase
CFOOKOKI_01889 3e-110 L COG2826 Transposase and inactivated derivatives, IS30 family
CFOOKOKI_01890 5.7e-175 L Psort location Cytoplasmic, score
CFOOKOKI_01891 3.1e-102 L PFAM Integrase catalytic region
CFOOKOKI_01892 2.6e-41 L Helix-turn-helix domain
CFOOKOKI_01893 2.3e-245 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CFOOKOKI_01894 1.1e-173 V ABC transporter transmembrane region
CFOOKOKI_01895 4.3e-181 L COG2826 Transposase and inactivated derivatives, IS30 family

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)