ORF_ID e_value Gene_name EC_number CAZy COGs Description
LPKCLIMN_00001 0.0 S domain, Protein
LPKCLIMN_00002 1.8e-192 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LPKCLIMN_00003 1.8e-104 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
LPKCLIMN_00004 6.2e-213 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
LPKCLIMN_00005 1e-251 gor 1.8.1.7 C pyridine nucleotide-disulfide oxidoreductase
LPKCLIMN_00006 1.6e-167 K AI-2E family transporter
LPKCLIMN_00007 1.8e-40
LPKCLIMN_00008 2.2e-165 S Alpha beta hydrolase
LPKCLIMN_00009 0.0 L Helicase C-terminal domain protein
LPKCLIMN_00010 6.7e-161 xth 3.1.11.2 L exodeoxyribonuclease III
LPKCLIMN_00011 2.5e-40 S Transglycosylase associated protein
LPKCLIMN_00013 3.5e-166 P CorA-like Mg2+ transporter protein
LPKCLIMN_00014 0.0 tetP J elongation factor G
LPKCLIMN_00015 2.2e-19
LPKCLIMN_00016 1.2e-154 yitS S EDD domain protein, DegV family
LPKCLIMN_00017 3.4e-137 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
LPKCLIMN_00018 7.1e-132 S Protein of unknown function (DUF975)
LPKCLIMN_00019 3e-116 ywnB S NAD(P)H-binding
LPKCLIMN_00020 4.6e-224 S Sterol carrier protein domain
LPKCLIMN_00022 4.9e-201 S Aldo keto reductase
LPKCLIMN_00023 1.3e-85 S Protein of unknown function (DUF3278)
LPKCLIMN_00024 1.2e-20 WQ51_00220 K Helix-turn-helix XRE-family like proteins
LPKCLIMN_00025 7.9e-114 gph 3.1.3.18 S HAD hydrolase, family IA, variant
LPKCLIMN_00027 1.7e-117 yhiD S MgtC family
LPKCLIMN_00028 0.0
LPKCLIMN_00029 3.3e-219 I Protein of unknown function (DUF2974)
LPKCLIMN_00030 2.2e-170 scrK 2.7.1.2, 2.7.1.4 GK ROK family
LPKCLIMN_00031 1.1e-245 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
LPKCLIMN_00032 4.8e-76 rplI J Binds to the 23S rRNA
LPKCLIMN_00033 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
LPKCLIMN_00034 3.2e-156 corA P CorA-like Mg2+ transporter protein
LPKCLIMN_00035 2.1e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LPKCLIMN_00036 6.6e-82 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
LPKCLIMN_00037 9.4e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
LPKCLIMN_00038 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LPKCLIMN_00039 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LPKCLIMN_00040 3e-204 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LPKCLIMN_00041 3.9e-19 yaaA S S4 domain
LPKCLIMN_00042 1.1e-203 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
LPKCLIMN_00043 1.4e-256 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LPKCLIMN_00044 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
LPKCLIMN_00045 1.7e-60 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
LPKCLIMN_00046 1.8e-148 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LPKCLIMN_00047 9.3e-248 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
LPKCLIMN_00048 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
LPKCLIMN_00049 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
LPKCLIMN_00050 4.3e-269 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LPKCLIMN_00051 5.8e-291 clcA P chloride
LPKCLIMN_00052 1.2e-201 EGP Major facilitator Superfamily
LPKCLIMN_00053 9e-153 ropB K Transcriptional regulator
LPKCLIMN_00054 2.2e-107
LPKCLIMN_00055 1.5e-115 flpA 4.1.99.16, 4.2.3.22, 4.2.3.75 K helix_turn_helix, cAMP Regulatory protein
LPKCLIMN_00056 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
LPKCLIMN_00057 6.5e-69 S Iron-sulphur cluster biosynthesis
LPKCLIMN_00058 2.3e-232 EGP Sugar (and other) transporter
LPKCLIMN_00059 2.3e-75 K Acetyltransferase (GNAT) domain
LPKCLIMN_00060 1e-248 ynbB 4.4.1.1 P aluminum resistance
LPKCLIMN_00061 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
LPKCLIMN_00062 4.1e-286 E Amino acid permease
LPKCLIMN_00063 0.0 pepO 3.4.24.71 O Peptidase family M13
LPKCLIMN_00064 4.4e-155 ropB K Helix-turn-helix XRE-family like proteins
LPKCLIMN_00065 0.0 copA 3.6.3.54 P P-type ATPase
LPKCLIMN_00066 1.1e-49 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
LPKCLIMN_00067 6.3e-66 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
LPKCLIMN_00068 1.4e-77 atkY K Penicillinase repressor
LPKCLIMN_00069 5.5e-90
LPKCLIMN_00070 4.1e-90
LPKCLIMN_00071 3e-69 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
LPKCLIMN_00072 1.6e-225 pbuG S permease
LPKCLIMN_00073 3.4e-46 I bis(5'-adenosyl)-triphosphatase activity
LPKCLIMN_00074 2.3e-232 pbuG S permease
LPKCLIMN_00075 7.4e-111 K helix_turn_helix, mercury resistance
LPKCLIMN_00077 3e-232 pbuG S permease
LPKCLIMN_00078 6e-238 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
LPKCLIMN_00079 3.7e-125 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
LPKCLIMN_00080 7.7e-120 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
LPKCLIMN_00081 1e-133 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
LPKCLIMN_00082 4e-161 yeaE S Aldo/keto reductase family
LPKCLIMN_00083 3e-18 S PD-(D/E)XK nuclease family transposase
LPKCLIMN_00084 8.4e-134 S membrane transporter protein
LPKCLIMN_00085 1.7e-157 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
LPKCLIMN_00086 2e-132 3.5.2.6 V Beta-lactamase enzyme family
LPKCLIMN_00087 1.5e-194 ykfB 5.1.1.20 M Belongs to the mandelate racemase muconate lactonizing enzyme family
LPKCLIMN_00088 1.4e-152 S Putative esterase
LPKCLIMN_00089 6.9e-214 S Bacterial protein of unknown function (DUF871)
LPKCLIMN_00090 3e-159 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
LPKCLIMN_00091 1.2e-261 pts29C 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LPKCLIMN_00092 1.3e-195 blaA6 V Beta-lactamase
LPKCLIMN_00093 1.4e-177 fpaP 3.4.11.5 I Releases the N-terminal proline from various substrates
LPKCLIMN_00094 1.6e-199 tcsA S ABC transporter substrate-binding protein PnrA-like
LPKCLIMN_00095 6.4e-168 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
LPKCLIMN_00096 3.1e-245 G Bacterial extracellular solute-binding protein
LPKCLIMN_00097 1.6e-174 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
LPKCLIMN_00098 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LPKCLIMN_00099 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
LPKCLIMN_00100 7.7e-183 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
LPKCLIMN_00101 1.7e-270 cydA 1.10.3.14 C ubiquinol oxidase
LPKCLIMN_00102 0.0 macB_3 V ABC transporter, ATP-binding protein
LPKCLIMN_00103 6.2e-202 S DUF218 domain
LPKCLIMN_00104 9.1e-105 S CAAX protease self-immunity
LPKCLIMN_00105 2e-94 S Protein of unknown function (DUF1440)
LPKCLIMN_00106 2.4e-270 G PTS system Galactitol-specific IIC component
LPKCLIMN_00107 4.4e-240 G PTS system sugar-specific permease component
LPKCLIMN_00108 2.3e-114 S Protein of unknown function (DUF969)
LPKCLIMN_00109 1.8e-159 S Protein of unknown function (DUF979)
LPKCLIMN_00110 2.6e-120 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
LPKCLIMN_00111 4.1e-34
LPKCLIMN_00112 8.9e-27
LPKCLIMN_00113 5.9e-160 mutR K Helix-turn-helix XRE-family like proteins
LPKCLIMN_00114 2.4e-220 S CAAX protease self-immunity
LPKCLIMN_00115 2.8e-241 cycA E Amino acid permease
LPKCLIMN_00117 1e-96 luxT K Bacterial regulatory proteins, tetR family
LPKCLIMN_00118 1.1e-139
LPKCLIMN_00119 7.2e-286 S Cysteine-rich secretory protein family
LPKCLIMN_00120 2.8e-207 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
LPKCLIMN_00121 3.3e-95
LPKCLIMN_00122 1.5e-273 yjcE P Sodium proton antiporter
LPKCLIMN_00123 1.4e-187 yibE S overlaps another CDS with the same product name
LPKCLIMN_00124 4.9e-118 yibF S overlaps another CDS with the same product name
LPKCLIMN_00125 7.6e-157 I alpha/beta hydrolase fold
LPKCLIMN_00126 0.0 G Belongs to the glycosyl hydrolase 31 family
LPKCLIMN_00127 5.3e-130 XK27_08435 K UTRA
LPKCLIMN_00128 2.7e-216 agaS G SIS domain
LPKCLIMN_00129 1.8e-228 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
LPKCLIMN_00130 8.7e-84 2.7.1.191 G PTS system sorbose subfamily IIB component
LPKCLIMN_00131 1.5e-140 XK27_08455 G PTS system sorbose-specific iic component
LPKCLIMN_00132 5.5e-147 manZ_1 G PTS system mannose/fructose/sorbose family IID component
LPKCLIMN_00133 9.3e-68 2.7.1.191 G PTS system fructose IIA component
LPKCLIMN_00134 1.3e-18 S PD-(D/E)XK nuclease family transposase
LPKCLIMN_00135 2.3e-207 S zinc-ribbon domain
LPKCLIMN_00136 1.4e-189
LPKCLIMN_00137 3.3e-88 ntd 2.4.2.6 F Nucleoside
LPKCLIMN_00138 4.9e-99 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LPKCLIMN_00139 1.5e-132 XK27_08440 K UTRA domain
LPKCLIMN_00140 2e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
LPKCLIMN_00141 3.8e-87 uspA T universal stress protein
LPKCLIMN_00143 9.8e-169 phnD P Phosphonate ABC transporter
LPKCLIMN_00144 4.3e-141 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
LPKCLIMN_00145 1.6e-130 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
LPKCLIMN_00146 5.4e-147 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
LPKCLIMN_00147 7.3e-83
LPKCLIMN_00148 6.2e-276 S Calcineurin-like phosphoesterase
LPKCLIMN_00149 0.0 asnB 6.3.5.4 E Asparagine synthase
LPKCLIMN_00150 7.3e-266 yxbA 6.3.1.12 S ATP-grasp enzyme
LPKCLIMN_00151 1.2e-64
LPKCLIMN_00152 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
LPKCLIMN_00153 5.3e-138 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LPKCLIMN_00154 6.4e-105 S Iron-sulfur cluster assembly protein
LPKCLIMN_00155 2.2e-229 XK27_04775 S PAS domain
LPKCLIMN_00156 4.8e-274 UW LPXTG-motif cell wall anchor domain protein
LPKCLIMN_00157 0.0 UW LPXTG-motif cell wall anchor domain protein
LPKCLIMN_00158 0.0 UW LPXTG-motif cell wall anchor domain protein
LPKCLIMN_00159 4.2e-228 yttB EGP Major facilitator Superfamily
LPKCLIMN_00160 6.6e-187 yihT 4.1.2.40, 4.1.2.57 G Belongs to the aldolase LacD family
LPKCLIMN_00161 4.1e-173 D nuclear chromosome segregation
LPKCLIMN_00162 2e-135 rpl K Helix-turn-helix domain, rpiR family
LPKCLIMN_00163 1.1e-164 pfkB 2.7.1.11, 2.7.1.56 H pfkB family carbohydrate kinase
LPKCLIMN_00164 0.0 fruA 2.7.1.202, 2.7.1.204 GT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LPKCLIMN_00165 0.0 pepO 3.4.24.71 O Peptidase family M13
LPKCLIMN_00166 0.0 S Bacterial membrane protein, YfhO
LPKCLIMN_00167 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
LPKCLIMN_00168 0.0 kup P Transport of potassium into the cell
LPKCLIMN_00169 0.0 kup P Transport of potassium into the cell
LPKCLIMN_00170 1.7e-72
LPKCLIMN_00171 2e-109
LPKCLIMN_00172 1.7e-28
LPKCLIMN_00173 1.4e-34 S Protein of unknown function (DUF2922)
LPKCLIMN_00174 3e-265 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
LPKCLIMN_00175 4.1e-254 lysA2 M Glycosyl hydrolases family 25
LPKCLIMN_00176 1.1e-144 fruK 2.7.1.11, 2.7.1.56 G pfkB family carbohydrate kinase
LPKCLIMN_00177 0.0 yjbQ P TrkA C-terminal domain protein
LPKCLIMN_00178 1.7e-179 S Oxidoreductase family, NAD-binding Rossmann fold
LPKCLIMN_00179 4e-131
LPKCLIMN_00180 7e-150
LPKCLIMN_00181 1.4e-74 S PAS domain
LPKCLIMN_00182 3.8e-133 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LPKCLIMN_00183 9.7e-42 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LPKCLIMN_00184 3.2e-69 2.4.1.83 GT2 S GtrA-like protein
LPKCLIMN_00185 8e-179 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
LPKCLIMN_00186 9.3e-119
LPKCLIMN_00187 7.8e-152 glcU U sugar transport
LPKCLIMN_00188 9e-172 yqhA G Aldose 1-epimerase
LPKCLIMN_00189 5.6e-195 brpA K Cell envelope-like function transcriptional attenuator common domain protein
LPKCLIMN_00190 7.2e-74 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
LPKCLIMN_00191 0.0 XK27_08315 M Sulfatase
LPKCLIMN_00192 2.8e-243 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LPKCLIMN_00194 3.7e-262 pepC 3.4.22.40 E aminopeptidase
LPKCLIMN_00195 8.8e-124 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
LPKCLIMN_00196 3.9e-256 pepC 3.4.22.40 E aminopeptidase
LPKCLIMN_00197 7.7e-43
LPKCLIMN_00198 8.8e-78 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LPKCLIMN_00199 3.3e-77 hsp O Belongs to the small heat shock protein (HSP20) family
LPKCLIMN_00200 3.4e-293 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LPKCLIMN_00201 3.7e-82
LPKCLIMN_00202 1.4e-248 celD 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LPKCLIMN_00203 1.3e-128 yydK K UTRA
LPKCLIMN_00204 3.4e-42 S Domain of unknown function (DUF3284)
LPKCLIMN_00205 6.2e-306 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LPKCLIMN_00206 1e-133 gmuR K UTRA
LPKCLIMN_00207 8.5e-51 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
LPKCLIMN_00208 2e-52 ptcB 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
LPKCLIMN_00209 1.5e-269 pts23C 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LPKCLIMN_00210 3e-283 pbg6 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LPKCLIMN_00211 1.4e-216 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LPKCLIMN_00212 2.1e-102 J Acetyltransferase (GNAT) domain
LPKCLIMN_00213 1.5e-106 yjbF S SNARE associated Golgi protein
LPKCLIMN_00214 7.1e-152 I alpha/beta hydrolase fold
LPKCLIMN_00215 4.4e-144 hipB K Helix-turn-helix
LPKCLIMN_00216 7.2e-261 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
LPKCLIMN_00217 6e-180
LPKCLIMN_00218 2.1e-123 S SNARE associated Golgi protein
LPKCLIMN_00219 6.1e-137 cof S haloacid dehalogenase-like hydrolase
LPKCLIMN_00220 0.0 ydgH S MMPL family
LPKCLIMN_00221 3.2e-98 yobS K Bacterial regulatory proteins, tetR family
LPKCLIMN_00222 1.4e-167 3.5.2.6 V Beta-lactamase enzyme family
LPKCLIMN_00223 5.4e-167 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
LPKCLIMN_00224 1.4e-80 yjcF S Acetyltransferase (GNAT) domain
LPKCLIMN_00225 6e-97 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
LPKCLIMN_00226 1.1e-77 yybA 2.3.1.57 K Transcriptional regulator
LPKCLIMN_00227 8.7e-52 ypaA S Protein of unknown function (DUF1304)
LPKCLIMN_00228 3e-240 G Bacterial extracellular solute-binding protein
LPKCLIMN_00229 3.9e-256 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
LPKCLIMN_00230 5e-148 gtsC P Binding-protein-dependent transport system inner membrane component
LPKCLIMN_00231 9.5e-158 gtsB P ABC-type sugar transport systems, permease components
LPKCLIMN_00232 7.1e-203 malK P ATPases associated with a variety of cellular activities
LPKCLIMN_00233 4.9e-284 pipD E Dipeptidase
LPKCLIMN_00234 6.7e-132 endA F DNA RNA non-specific endonuclease
LPKCLIMN_00235 1.3e-148 dkg S reductase
LPKCLIMN_00236 1.1e-201 ltrA S Bacterial low temperature requirement A protein (LtrA)
LPKCLIMN_00237 4.5e-185 dnaQ 2.7.7.7 L EXOIII
LPKCLIMN_00238 1.3e-140 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LPKCLIMN_00239 3.1e-113 yviA S Protein of unknown function (DUF421)
LPKCLIMN_00240 4e-75 S Protein of unknown function (DUF3290)
LPKCLIMN_00241 8.4e-173 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
LPKCLIMN_00242 4.1e-43 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
LPKCLIMN_00243 1.9e-95 S PAS domain
LPKCLIMN_00244 6.3e-145 pnuC H nicotinamide mononucleotide transporter
LPKCLIMN_00245 0.0 M domain protein
LPKCLIMN_00246 4.6e-07 GM domain, Protein
LPKCLIMN_00247 9.9e-43 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
LPKCLIMN_00248 8.1e-162 3.6.4.12 S PD-(D/E)XK nuclease family transposase
LPKCLIMN_00249 2.3e-128 S PAS domain
LPKCLIMN_00250 2.7e-239 ydjN U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
LPKCLIMN_00251 3.9e-217 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
LPKCLIMN_00252 8e-90 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
LPKCLIMN_00253 0.0 dnaX 2.4.99.16, 2.7.7.7 GH13 M domain protein
LPKCLIMN_00254 5e-69
LPKCLIMN_00255 0.0 uvrA3 L excinuclease ABC, A subunit
LPKCLIMN_00256 0.0 oppA E ABC transporter substrate-binding protein
LPKCLIMN_00257 1.4e-162 EG EamA-like transporter family
LPKCLIMN_00258 1.6e-285 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LPKCLIMN_00259 0.0 bglP 2.7.1.211 G phosphotransferase system
LPKCLIMN_00260 7.1e-150 licT K CAT RNA binding domain
LPKCLIMN_00261 3.9e-172 fhaB M Rib/alpha-like repeat
LPKCLIMN_00262 0.0 fhaB M Rib/alpha-like repeat
LPKCLIMN_00263 9.8e-103 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LPKCLIMN_00264 6.7e-164 coaA 2.7.1.33 F Pantothenic acid kinase
LPKCLIMN_00265 6.2e-105 E GDSL-like Lipase/Acylhydrolase
LPKCLIMN_00266 8.6e-243 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LPKCLIMN_00267 4.9e-82 rarA L MgsA AAA+ ATPase C terminal
LPKCLIMN_00268 2.3e-122 K Helix-turn-helix domain, rpiR family
LPKCLIMN_00269 1.1e-135 yvpB S Peptidase_C39 like family
LPKCLIMN_00270 0.0 helD 3.6.4.12 L DNA helicase
LPKCLIMN_00271 1.2e-117 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
LPKCLIMN_00273 6.9e-167 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
LPKCLIMN_00274 9.9e-135 fruR K DeoR C terminal sensor domain
LPKCLIMN_00275 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
LPKCLIMN_00276 1.6e-222 natB CP ABC-2 family transporter protein
LPKCLIMN_00277 1.2e-166 natA S ABC transporter, ATP-binding protein
LPKCLIMN_00278 2.3e-144 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
LPKCLIMN_00279 2.2e-306 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LPKCLIMN_00280 2.9e-202 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
LPKCLIMN_00281 7.4e-121 K response regulator
LPKCLIMN_00282 0.0 V ABC transporter
LPKCLIMN_00283 1e-296 V ABC transporter, ATP-binding protein
LPKCLIMN_00284 3.4e-144 XK27_01040 S Protein of unknown function (DUF1129)
LPKCLIMN_00285 3.4e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
LPKCLIMN_00286 1.3e-43 yyzM S Bacterial protein of unknown function (DUF951)
LPKCLIMN_00287 2.2e-154 spo0J K Belongs to the ParB family
LPKCLIMN_00288 4.4e-138 soj D Sporulation initiation inhibitor
LPKCLIMN_00289 2.1e-144 noc K Belongs to the ParB family
LPKCLIMN_00290 1.2e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
LPKCLIMN_00291 3.2e-95 cvpA S Colicin V production protein
LPKCLIMN_00292 1.2e-179 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
LPKCLIMN_00293 4.4e-149 3.1.3.48 T Tyrosine phosphatase family
LPKCLIMN_00294 6e-199 4.2.1.126 S Bacterial protein of unknown function (DUF871)
LPKCLIMN_00295 3.7e-99 azr 1.5.1.36 S NADPH-dependent FMN reductase
LPKCLIMN_00296 5.3e-98 nqr 1.5.1.36 S NADPH-dependent FMN reductase
LPKCLIMN_00297 1e-108 K WHG domain
LPKCLIMN_00298 8e-38
LPKCLIMN_00299 1.7e-273 pipD E Dipeptidase
LPKCLIMN_00300 4.4e-296 arbB 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
LPKCLIMN_00301 3.8e-297 2.7.1.211 G phosphotransferase system
LPKCLIMN_00302 4.2e-158 K CAT RNA binding domain
LPKCLIMN_00303 6.8e-119 devA 3.6.3.25 V ABC transporter, ATP-binding protein
LPKCLIMN_00304 8.8e-174 hrtB V ABC transporter permease
LPKCLIMN_00305 1.9e-92 ygfC K Bacterial regulatory proteins, tetR family
LPKCLIMN_00306 3.5e-111 G phosphoglycerate mutase
LPKCLIMN_00307 5.5e-115 G Phosphoglycerate mutase family
LPKCLIMN_00308 1.8e-141 aroD S Alpha/beta hydrolase family
LPKCLIMN_00309 2e-106 S Protein of unknown function (DUF975)
LPKCLIMN_00310 2.1e-140 S Belongs to the UPF0246 family
LPKCLIMN_00311 2.2e-52
LPKCLIMN_00312 6.7e-130
LPKCLIMN_00313 2.5e-161 O protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LPKCLIMN_00314 0.0 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
LPKCLIMN_00315 3.4e-143 3.4.16.4, 3.5.2.6 V Beta-lactamase enzyme family
LPKCLIMN_00316 6.3e-154 ybbH_2 K Helix-turn-helix domain, rpiR family
LPKCLIMN_00317 2.1e-173 2.7.7.12 C Domain of unknown function (DUF4931)
LPKCLIMN_00318 1.4e-53 aroD 1.1.1.25, 4.2.1.10 E 3-dehydroquinate dehydratase activity
LPKCLIMN_00319 1.1e-156
LPKCLIMN_00320 3e-226 mdtG EGP Major facilitator Superfamily
LPKCLIMN_00321 1.4e-124 puuD S peptidase C26
LPKCLIMN_00322 4.3e-297 V ABC transporter transmembrane region
LPKCLIMN_00323 2.4e-92 ymdB S Macro domain protein
LPKCLIMN_00324 0.0 scrA 2.7.1.211, 5.3.1.1 G phosphotransferase system
LPKCLIMN_00325 1e-300 scrB 3.2.1.26 GH32 G invertase
LPKCLIMN_00326 1.2e-185 scrR K Transcriptional regulator, LacI family
LPKCLIMN_00327 3e-147 ptp2 3.1.3.48 T Tyrosine phosphatase family
LPKCLIMN_00328 6.9e-150 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
LPKCLIMN_00329 7.1e-132 cobQ S glutamine amidotransferase
LPKCLIMN_00330 1.3e-257 yfnA E Amino Acid
LPKCLIMN_00331 1.6e-163 EG EamA-like transporter family
LPKCLIMN_00332 2.8e-193 asnA 6.3.1.1 F aspartate--ammonia ligase
LPKCLIMN_00333 3.9e-234 S CAAX protease self-immunity
LPKCLIMN_00334 5e-241 steT_1 E amino acid
LPKCLIMN_00335 9.1e-138 puuD S peptidase C26
LPKCLIMN_00336 4.2e-224 yifK E Amino acid permease
LPKCLIMN_00337 3.7e-252 yifK E Amino acid permease
LPKCLIMN_00338 1.8e-65 manO S Domain of unknown function (DUF956)
LPKCLIMN_00339 5.6e-172 manN G system, mannose fructose sorbose family IID component
LPKCLIMN_00340 1.3e-124 manY G PTS system
LPKCLIMN_00341 9.5e-186 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
LPKCLIMN_00342 0.0 infB UW LPXTG-motif cell wall anchor domain protein
LPKCLIMN_00343 0.0 3.1.31.1 M domain protein
LPKCLIMN_00344 1.6e-266 E amino acid
LPKCLIMN_00345 1.6e-171 K LysR substrate binding domain
LPKCLIMN_00346 0.0 1.3.5.4 C FAD binding domain
LPKCLIMN_00347 1.8e-243 brnQ U Component of the transport system for branched-chain amino acids
LPKCLIMN_00348 1.8e-133 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
LPKCLIMN_00349 1.8e-178 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
LPKCLIMN_00350 1.1e-88 S Peptidase propeptide and YPEB domain
LPKCLIMN_00351 5.9e-185 cbh 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
LPKCLIMN_00352 5.7e-250 yhjX_2 P Major Facilitator Superfamily
LPKCLIMN_00353 6.7e-61 yhjX_2 P Major Facilitator Superfamily
LPKCLIMN_00354 3.5e-132 yhjX_2 P Major Facilitator Superfamily
LPKCLIMN_00355 6.1e-165 arbZ I Phosphate acyltransferases
LPKCLIMN_00356 2.9e-184 arbY M Glycosyl transferase family 8
LPKCLIMN_00357 1.7e-184 arbY M Glycosyl transferase family 8
LPKCLIMN_00358 3.2e-155 arbx M Glycosyl transferase family 8
LPKCLIMN_00359 7.8e-151 arbV 2.3.1.51 I Acyl-transferase
LPKCLIMN_00362 1.2e-129 K response regulator
LPKCLIMN_00363 0.0 vicK 2.7.13.3 T Histidine kinase
LPKCLIMN_00364 3.7e-254 yycH S YycH protein
LPKCLIMN_00365 3.7e-143 yycI S YycH protein
LPKCLIMN_00366 5.1e-150 vicX 3.1.26.11 S domain protein
LPKCLIMN_00367 2.9e-184 htrA 3.4.21.107 O serine protease
LPKCLIMN_00368 9.5e-83 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LPKCLIMN_00369 1.1e-110 P Cobalt transport protein
LPKCLIMN_00370 9.3e-253 cbiO1 S ABC transporter, ATP-binding protein
LPKCLIMN_00371 1.3e-94 S ABC-type cobalt transport system, permease component
LPKCLIMN_00372 2.3e-170 K helix_turn_helix, arabinose operon control protein
LPKCLIMN_00373 2e-147 htpX O Belongs to the peptidase M48B family
LPKCLIMN_00374 9.9e-92 lemA S LemA family
LPKCLIMN_00375 8.3e-183 ybiR P Citrate transporter
LPKCLIMN_00376 1.3e-69 S Iron-sulphur cluster biosynthesis
LPKCLIMN_00377 1.7e-16
LPKCLIMN_00378 1.7e-154
LPKCLIMN_00380 4.3e-247 ydaM M Glycosyl transferase
LPKCLIMN_00381 2.4e-214 G Glycosyl hydrolases family 8
LPKCLIMN_00382 4.5e-120 yfbR S HD containing hydrolase-like enzyme
LPKCLIMN_00383 3.7e-162 L HNH nucleases
LPKCLIMN_00384 9.6e-138 glnQ E ABC transporter, ATP-binding protein
LPKCLIMN_00385 3.7e-280 glnP P ABC transporter permease
LPKCLIMN_00386 1.2e-106 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
LPKCLIMN_00387 1.5e-64 yeaO S Protein of unknown function, DUF488
LPKCLIMN_00388 1.6e-127 terC P Integral membrane protein TerC family
LPKCLIMN_00389 5.9e-94 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
LPKCLIMN_00390 5.5e-135 cobB K SIR2 family
LPKCLIMN_00391 6.7e-81
LPKCLIMN_00392 6.4e-273 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LPKCLIMN_00393 5.6e-124 yugP S Putative neutral zinc metallopeptidase
LPKCLIMN_00394 6.3e-176 S Alpha/beta hydrolase of unknown function (DUF915)
LPKCLIMN_00395 6.2e-145 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LPKCLIMN_00396 8.4e-163 ypuA S Protein of unknown function (DUF1002)
LPKCLIMN_00397 2.2e-143 2.4.1.293 GT2 M Glycosyltransferase like family 2
LPKCLIMN_00398 6.9e-124 S Alpha/beta hydrolase family
LPKCLIMN_00399 1.4e-62
LPKCLIMN_00400 4.1e-181 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LPKCLIMN_00401 3.6e-102 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
LPKCLIMN_00402 1.1e-256 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LPKCLIMN_00403 3.4e-288 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LPKCLIMN_00404 2.6e-274 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
LPKCLIMN_00405 1.7e-78 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
LPKCLIMN_00406 1.2e-140 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LPKCLIMN_00407 8.3e-154 lacT K PRD domain
LPKCLIMN_00408 1.9e-56 lacF 2.7.1.196, 2.7.1.205, 2.7.1.207 G PTS system, Lactose/Cellobiose specific IIA subunit
LPKCLIMN_00409 7.5e-292 celB 2.7.1.196, 2.7.1.205, 2.7.1.207 G Phosphotransferase system, EIIC
LPKCLIMN_00410 5.3e-291 lacG 3.2.1.85 G Belongs to the glycosyl hydrolase 1 family
LPKCLIMN_00411 1.9e-98 yvrI K sigma factor activity
LPKCLIMN_00412 1.7e-34
LPKCLIMN_00413 1.1e-289 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
LPKCLIMN_00414 3.3e-211 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
LPKCLIMN_00415 6.9e-270 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
LPKCLIMN_00416 5.6e-228 G Major Facilitator Superfamily
LPKCLIMN_00417 6.3e-193 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
LPKCLIMN_00418 1.8e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
LPKCLIMN_00419 9.1e-12 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
LPKCLIMN_00420 2e-100 nusG K Participates in transcription elongation, termination and antitermination
LPKCLIMN_00421 5.3e-69 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LPKCLIMN_00422 1.6e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
LPKCLIMN_00423 4.6e-109 glnP P ABC transporter permease
LPKCLIMN_00424 8.8e-116 glnQ 3.6.3.21 E ABC transporter
LPKCLIMN_00425 6.2e-148 aatB ET ABC transporter substrate-binding protein
LPKCLIMN_00426 3.1e-96 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LPKCLIMN_00427 9.4e-51 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
LPKCLIMN_00428 1.3e-149 kcsA P Ion transport protein
LPKCLIMN_00429 1.6e-32
LPKCLIMN_00430 6.9e-29 rsmC 2.1.1.172 J Methyltransferase
LPKCLIMN_00431 1e-66 rsmC 2.1.1.172 J Methyltransferase
LPKCLIMN_00432 1.9e-23
LPKCLIMN_00433 8.4e-81 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
LPKCLIMN_00434 0.0 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LPKCLIMN_00435 5.9e-52 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LPKCLIMN_00436 6.2e-108 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LPKCLIMN_00437 2.4e-26 S Protein of unknown function (DUF2508)
LPKCLIMN_00438 3.7e-114 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LPKCLIMN_00439 4.5e-52 yaaQ S Cyclic-di-AMP receptor
LPKCLIMN_00440 2.8e-154 holB 2.7.7.7 L DNA polymerase III
LPKCLIMN_00441 1.3e-57 yabA L Involved in initiation control of chromosome replication
LPKCLIMN_00442 1.8e-156 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LPKCLIMN_00443 1.9e-127 fat 3.1.2.21 I Acyl-ACP thioesterase
LPKCLIMN_00444 8.9e-87 folT S ECF transporter, substrate-specific component
LPKCLIMN_00445 1.5e-132 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
LPKCLIMN_00446 2.4e-98 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
LPKCLIMN_00447 5.6e-197 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LPKCLIMN_00448 7.7e-09 D nuclear chromosome segregation
LPKCLIMN_00449 8.4e-10 D nuclear chromosome segregation
LPKCLIMN_00450 1.3e-170
LPKCLIMN_00451 4.2e-115
LPKCLIMN_00452 1.7e-254 clcA P chloride
LPKCLIMN_00453 4.5e-48
LPKCLIMN_00454 2.1e-99 S Protein of unknown function (DUF3990)
LPKCLIMN_00455 1.4e-189 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
LPKCLIMN_00456 4.1e-250 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LPKCLIMN_00457 1.3e-246 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LPKCLIMN_00458 2.3e-78 apfA 2.7.7.72, 3.6.1.61 F NUDIX domain
LPKCLIMN_00459 1.2e-48 L bacterial-type proximal promoter sequence-specific DNA binding
LPKCLIMN_00460 1.7e-53 S Bacterial toxin of type II toxin-antitoxin system, YafQ
LPKCLIMN_00461 5e-234 yfdE 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
LPKCLIMN_00462 6.7e-153 K helix_turn_helix, arabinose operon control protein
LPKCLIMN_00463 0.0 bglX 3.2.1.21 GH3 G hydrolase, family 3
LPKCLIMN_00464 0.0 scrA 2.7.1.211 G phosphotransferase system
LPKCLIMN_00465 9.7e-307 scrB 2.7.1.211, 3.2.1.26 GH32 G Glycosyl hydrolases family 32
LPKCLIMN_00466 1.4e-59
LPKCLIMN_00467 1.7e-151 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
LPKCLIMN_00468 1.2e-92 S ECF-type riboflavin transporter, S component
LPKCLIMN_00469 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
LPKCLIMN_00470 1.2e-12
LPKCLIMN_00471 4.4e-247 S Uncharacterized protein conserved in bacteria (DUF2325)
LPKCLIMN_00472 1.2e-149 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
LPKCLIMN_00473 7.3e-64 arsC 1.20.4.1 P Belongs to the ArsC family
LPKCLIMN_00474 2e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
LPKCLIMN_00475 2.8e-48 rpmA J Belongs to the bacterial ribosomal protein bL27 family
LPKCLIMN_00476 2e-197 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
LPKCLIMN_00477 8.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LPKCLIMN_00478 2.2e-73 yqhY S Asp23 family, cell envelope-related function
LPKCLIMN_00479 8e-67 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LPKCLIMN_00480 2.1e-154 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LPKCLIMN_00481 1.5e-253 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LPKCLIMN_00482 3.8e-35 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
LPKCLIMN_00483 7.8e-160 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
LPKCLIMN_00484 3.7e-156 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
LPKCLIMN_00485 4.5e-265 recN L May be involved in recombinational repair of damaged DNA
LPKCLIMN_00486 4.6e-48
LPKCLIMN_00487 1.6e-111 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
LPKCLIMN_00488 1.7e-31 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
LPKCLIMN_00489 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LPKCLIMN_00490 7.1e-175 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LPKCLIMN_00491 1.2e-244 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LPKCLIMN_00492 4.5e-140 stp 3.1.3.16 T phosphatase
LPKCLIMN_00493 0.0 KLT serine threonine protein kinase
LPKCLIMN_00494 1.4e-164 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
LPKCLIMN_00495 1.8e-121 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
LPKCLIMN_00496 1e-122 thiN 2.7.6.2 H thiamine pyrophosphokinase
LPKCLIMN_00497 1.6e-25 rpmB J Belongs to the bacterial ribosomal protein bL28 family
LPKCLIMN_00498 1.4e-57 asp S Asp23 family, cell envelope-related function
LPKCLIMN_00499 9.6e-308 yloV S DAK2 domain fusion protein YloV
LPKCLIMN_00500 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LPKCLIMN_00501 1.7e-182 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
LPKCLIMN_00502 2.6e-36 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
LPKCLIMN_00503 1.1e-192 oppD P Belongs to the ABC transporter superfamily
LPKCLIMN_00504 4.4e-180 oppF P Belongs to the ABC transporter superfamily
LPKCLIMN_00505 9.8e-180 oppB P ABC transporter permease
LPKCLIMN_00506 2.1e-163 oppC P Binding-protein-dependent transport system inner membrane component
LPKCLIMN_00507 0.0 oppA E ABC transporter substrate-binding protein
LPKCLIMN_00508 0.0 oppA E ABC transporter substrate-binding protein
LPKCLIMN_00509 1.6e-123 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
LPKCLIMN_00510 0.0 smc D Required for chromosome condensation and partitioning
LPKCLIMN_00511 7.8e-167 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
LPKCLIMN_00512 1.6e-287 pipD E Dipeptidase
LPKCLIMN_00513 4.9e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
LPKCLIMN_00514 1.4e-227 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LPKCLIMN_00515 7.6e-45 rpsP J Belongs to the bacterial ribosomal protein bS16 family
LPKCLIMN_00516 7.4e-97 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LPKCLIMN_00517 2.2e-136 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
LPKCLIMN_00518 1e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
LPKCLIMN_00519 1.4e-92 lepB 3.4.21.89 U Belongs to the peptidase S26 family
LPKCLIMN_00520 3.3e-80 K DNA-templated transcription, initiation
LPKCLIMN_00521 3.6e-87
LPKCLIMN_00522 2.1e-53
LPKCLIMN_00523 2.5e-121 frnE Q DSBA-like thioredoxin domain
LPKCLIMN_00524 7.7e-225
LPKCLIMN_00525 1.2e-70 S Domain of unknown function (DUF4767)
LPKCLIMN_00526 1.5e-81
LPKCLIMN_00527 6.7e-89 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LPKCLIMN_00528 1.2e-103 engB D Necessary for normal cell division and for the maintenance of normal septation
LPKCLIMN_00529 3.5e-233 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LPKCLIMN_00530 9.5e-205 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
LPKCLIMN_00531 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LPKCLIMN_00532 7.7e-160
LPKCLIMN_00533 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LPKCLIMN_00534 1.6e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LPKCLIMN_00535 7.5e-34 rpsT J Binds directly to 16S ribosomal RNA
LPKCLIMN_00536 1.2e-177 holA 2.7.7.7 L DNA polymerase III delta subunit
LPKCLIMN_00537 0.0 comEC S Competence protein ComEC
LPKCLIMN_00538 2.4e-79 comEA L Competence protein ComEA
LPKCLIMN_00539 2.5e-186 ylbL T Belongs to the peptidase S16 family
LPKCLIMN_00540 1.5e-86 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LPKCLIMN_00541 7.2e-95 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
LPKCLIMN_00542 6.1e-52 ylbG S UPF0298 protein
LPKCLIMN_00543 5.9e-211 ftsW D Belongs to the SEDS family
LPKCLIMN_00544 0.0 typA T GTP-binding protein TypA
LPKCLIMN_00545 5.2e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
LPKCLIMN_00546 3e-34 ykzG S Belongs to the UPF0356 family
LPKCLIMN_00547 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LPKCLIMN_00548 1.9e-175 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
LPKCLIMN_00549 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
LPKCLIMN_00550 5.1e-116 S Repeat protein
LPKCLIMN_00551 2e-123 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
LPKCLIMN_00552 2.3e-220 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
LPKCLIMN_00553 1.6e-57 XK27_04120 S Putative amino acid metabolism
LPKCLIMN_00554 3.9e-215 iscS 2.8.1.7 E Aminotransferase class V
LPKCLIMN_00555 1.6e-126 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LPKCLIMN_00557 9.7e-103 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
LPKCLIMN_00558 2e-32 cspA K 'Cold-shock' DNA-binding domain
LPKCLIMN_00559 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LPKCLIMN_00560 2.1e-119 gpsB D DivIVA domain protein
LPKCLIMN_00561 4.8e-148 ylmH S S4 domain protein
LPKCLIMN_00562 2e-27 yggT S YGGT family
LPKCLIMN_00563 3.6e-73 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
LPKCLIMN_00564 8.9e-235 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LPKCLIMN_00565 4.1e-240 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
LPKCLIMN_00566 4.8e-154 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
LPKCLIMN_00567 1.2e-210 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LPKCLIMN_00568 2.5e-261 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LPKCLIMN_00569 2.7e-45 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LPKCLIMN_00570 7.8e-146 recX 2.4.1.337 GT4 S Regulatory protein RecX
LPKCLIMN_00571 2.4e-112 ygaC J Belongs to the UPF0374 family
LPKCLIMN_00572 4.9e-90
LPKCLIMN_00573 3e-78
LPKCLIMN_00574 1.6e-157 hlyX S Transporter associated domain
LPKCLIMN_00575 7.9e-304 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
LPKCLIMN_00576 1.1e-43 XK27_09445 S Domain of unknown function (DUF1827)
LPKCLIMN_00577 0.0 clpE O Belongs to the ClpA ClpB family
LPKCLIMN_00578 6.9e-26
LPKCLIMN_00579 4.2e-40 ptsH G phosphocarrier protein HPR
LPKCLIMN_00580 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LPKCLIMN_00581 4.7e-67 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
LPKCLIMN_00582 5.5e-118 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
LPKCLIMN_00583 1.7e-162 coiA 3.6.4.12 S Competence protein
LPKCLIMN_00584 4.5e-106 yjbH Q Thioredoxin
LPKCLIMN_00585 3.3e-112 yjbK S CYTH
LPKCLIMN_00586 6.7e-113 yjbM 2.7.6.5 S RelA SpoT domain protein
LPKCLIMN_00587 4e-150 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LPKCLIMN_00588 3.7e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LPKCLIMN_00589 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
LPKCLIMN_00590 3.9e-234 N Uncharacterized conserved protein (DUF2075)
LPKCLIMN_00591 4.8e-201 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
LPKCLIMN_00592 9.9e-67 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
LPKCLIMN_00593 5.4e-212 yubA S AI-2E family transporter
LPKCLIMN_00594 2.7e-105 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
LPKCLIMN_00595 4.6e-76 WQ51_03320 S Protein of unknown function (DUF1149)
LPKCLIMN_00596 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
LPKCLIMN_00597 2.2e-229 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
LPKCLIMN_00598 2.9e-232 S Peptidase M16
LPKCLIMN_00599 1.6e-129 IQ Enoyl-(Acyl carrier protein) reductase
LPKCLIMN_00600 4.3e-125 ymfM S Helix-turn-helix domain
LPKCLIMN_00601 1.4e-96 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LPKCLIMN_00602 1.9e-195 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LPKCLIMN_00603 1.2e-209 rny S Endoribonuclease that initiates mRNA decay
LPKCLIMN_00604 2.7e-192 tagO 2.7.8.33, 2.7.8.35 M transferase
LPKCLIMN_00605 2.5e-118 yvyE 3.4.13.9 S YigZ family
LPKCLIMN_00606 1.1e-242 comFA L Helicase C-terminal domain protein
LPKCLIMN_00607 5.7e-126 comFC S Competence protein
LPKCLIMN_00608 4.5e-97 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LPKCLIMN_00609 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
LPKCLIMN_00610 6.2e-185 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
LPKCLIMN_00611 2.5e-35
LPKCLIMN_00612 3.8e-176 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
LPKCLIMN_00613 4.1e-158 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LPKCLIMN_00614 8.8e-187 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
LPKCLIMN_00615 6e-174 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
LPKCLIMN_00616 9.3e-155 K Helix-turn-helix XRE-family like proteins
LPKCLIMN_00617 8.3e-68
LPKCLIMN_00618 0.0 uup S ABC transporter, ATP-binding protein
LPKCLIMN_00619 8.7e-116 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
LPKCLIMN_00620 3e-104 yvdD 3.2.2.10 S Belongs to the LOG family
LPKCLIMN_00621 1e-78 XK27_02470 K LytTr DNA-binding domain
LPKCLIMN_00622 1.7e-123 liaI S membrane
LPKCLIMN_00623 8.8e-44 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
LPKCLIMN_00624 8.2e-296 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
LPKCLIMN_00625 0.0 fhaB 4.3.1.7 UW LPXTG-motif cell wall anchor domain protein
LPKCLIMN_00626 0.0 nisT V ABC transporter
LPKCLIMN_00627 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LPKCLIMN_00628 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
LPKCLIMN_00629 1.6e-100 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
LPKCLIMN_00630 1.4e-187 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
LPKCLIMN_00631 4.5e-31 yajC U Preprotein translocase
LPKCLIMN_00632 1.1e-283 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LPKCLIMN_00633 1.4e-209 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LPKCLIMN_00634 6.6e-184 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
LPKCLIMN_00635 1.5e-229 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
LPKCLIMN_00636 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LPKCLIMN_00637 2.6e-42 yrzL S Belongs to the UPF0297 family
LPKCLIMN_00638 1.4e-72 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LPKCLIMN_00639 1.8e-50 yrzB S Belongs to the UPF0473 family
LPKCLIMN_00640 1.6e-91 cvpA S Colicin V production protein
LPKCLIMN_00641 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
LPKCLIMN_00642 6.6e-53 trxA O Belongs to the thioredoxin family
LPKCLIMN_00643 2.4e-68 yslB S Protein of unknown function (DUF2507)
LPKCLIMN_00644 6.5e-145 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
LPKCLIMN_00645 1.9e-115 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LPKCLIMN_00646 9.1e-220 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LPKCLIMN_00647 2e-158 ykuT M mechanosensitive ion channel
LPKCLIMN_00649 4e-51
LPKCLIMN_00650 5.9e-213 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
LPKCLIMN_00651 4.3e-178 ccpA K catabolite control protein A
LPKCLIMN_00652 9.1e-281 V ABC transporter transmembrane region
LPKCLIMN_00653 2.9e-173 S membrane
LPKCLIMN_00654 4.9e-162 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
LPKCLIMN_00655 8.9e-192 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LPKCLIMN_00656 2.7e-296 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
LPKCLIMN_00657 1.6e-08
LPKCLIMN_00659 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
LPKCLIMN_00660 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LPKCLIMN_00661 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LPKCLIMN_00662 4e-111 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
LPKCLIMN_00663 3.5e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LPKCLIMN_00664 1e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
LPKCLIMN_00665 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LPKCLIMN_00666 5.8e-49 rpsJ J Involved in the binding of tRNA to the ribosomes
LPKCLIMN_00667 2.2e-111 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LPKCLIMN_00668 2.3e-105 rplD J Forms part of the polypeptide exit tunnel
LPKCLIMN_00669 2.2e-45 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
LPKCLIMN_00670 5.6e-155 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LPKCLIMN_00671 5e-47 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LPKCLIMN_00672 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LPKCLIMN_00673 9.4e-121 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LPKCLIMN_00674 6.6e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LPKCLIMN_00675 2.2e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
LPKCLIMN_00676 7.7e-42 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LPKCLIMN_00677 5.6e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LPKCLIMN_00678 1.4e-34 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LPKCLIMN_00679 4.2e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LPKCLIMN_00680 2.3e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LPKCLIMN_00681 2.7e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LPKCLIMN_00682 5e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LPKCLIMN_00683 1.9e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LPKCLIMN_00684 1.9e-76 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LPKCLIMN_00685 1.4e-23 rpmD J Ribosomal protein L30
LPKCLIMN_00686 1.3e-70 rplO J Binds to the 23S rRNA
LPKCLIMN_00687 5.8e-236 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
LPKCLIMN_00688 2.7e-120 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
LPKCLIMN_00689 1.4e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LPKCLIMN_00690 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
LPKCLIMN_00691 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LPKCLIMN_00692 2.6e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LPKCLIMN_00693 1.3e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LPKCLIMN_00694 1.3e-61 rplQ J Ribosomal protein L17
LPKCLIMN_00695 6.7e-156 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LPKCLIMN_00696 2.2e-162 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LPKCLIMN_00697 1.1e-139 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LPKCLIMN_00698 4.2e-152 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
LPKCLIMN_00699 4.5e-79 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LPKCLIMN_00700 1.5e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
LPKCLIMN_00701 1.8e-80
LPKCLIMN_00702 1.2e-160 1.6.5.2 GM NmrA-like family
LPKCLIMN_00703 3.8e-110 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
LPKCLIMN_00704 4.3e-129 pgm3 G Belongs to the phosphoglycerate mutase family
LPKCLIMN_00705 2.6e-52 K Transcriptional regulator, ArsR family
LPKCLIMN_00706 3.4e-155 czcD P cation diffusion facilitator family transporter
LPKCLIMN_00707 2e-42
LPKCLIMN_00708 5.4e-26
LPKCLIMN_00709 1.4e-127 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LPKCLIMN_00710 2.6e-185 S AAA domain
LPKCLIMN_00711 2.1e-257 pepC 3.4.22.40 E Peptidase C1-like family
LPKCLIMN_00712 3.6e-67 doc S Fic/DOC family
LPKCLIMN_00713 4.1e-37
LPKCLIMN_00714 3.5e-180 K Helix-turn-helix
LPKCLIMN_00716 1.6e-304 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
LPKCLIMN_00717 1.6e-135 K DNA-binding helix-turn-helix protein
LPKCLIMN_00718 5.3e-104 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
LPKCLIMN_00719 6e-236 pbuX F xanthine permease
LPKCLIMN_00720 2.2e-240 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LPKCLIMN_00721 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
LPKCLIMN_00722 1.3e-64 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
LPKCLIMN_00723 6e-73 S Domain of unknown function (DUF1934)
LPKCLIMN_00724 3.3e-266 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
LPKCLIMN_00725 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
LPKCLIMN_00726 9.7e-155 malG P ABC transporter permease
LPKCLIMN_00727 6.5e-254 malF P Binding-protein-dependent transport system inner membrane component
LPKCLIMN_00728 5e-229 malE G Bacterial extracellular solute-binding protein
LPKCLIMN_00729 3.6e-210 msmX P Belongs to the ABC transporter superfamily
LPKCLIMN_00730 4.8e-109 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
LPKCLIMN_00731 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
LPKCLIMN_00732 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
LPKCLIMN_00733 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
LPKCLIMN_00734 5.8e-177 yvdE K helix_turn _helix lactose operon repressor
LPKCLIMN_00735 4.8e-174 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LPKCLIMN_00736 1.1e-219 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LPKCLIMN_00737 2.6e-152 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
LPKCLIMN_00738 7.4e-36 veg S Biofilm formation stimulator VEG
LPKCLIMN_00739 4.7e-160 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
LPKCLIMN_00740 1.9e-98 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LPKCLIMN_00741 1.6e-148 tatD L hydrolase, TatD family
LPKCLIMN_00742 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LPKCLIMN_00743 1.8e-91 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
LPKCLIMN_00744 4.7e-100 S TPM domain
LPKCLIMN_00745 4.3e-91 comEB 3.5.4.12 F MafB19-like deaminase
LPKCLIMN_00746 2.6e-194 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
LPKCLIMN_00747 2.3e-113 E Belongs to the SOS response-associated peptidase family
LPKCLIMN_00749 1.3e-114
LPKCLIMN_00750 9.3e-33 ypbG 2.7.1.2 GK ROK family
LPKCLIMN_00751 3.1e-107 ypbG 2.7.1.2 GK ROK family
LPKCLIMN_00752 8.3e-84 S Putative adhesin
LPKCLIMN_00753 5.2e-113 udk 2.7.1.48 F Cytidine monophosphokinase
LPKCLIMN_00754 1.3e-157 EGP Major facilitator superfamily
LPKCLIMN_00755 1.3e-76 EGP Major facilitator superfamily
LPKCLIMN_00757 6.8e-56 S Enterocin A Immunity
LPKCLIMN_00758 0.0 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
LPKCLIMN_00759 4.3e-163 rssA S Phospholipase, patatin family
LPKCLIMN_00760 4.5e-256 glnPH2 P ABC transporter permease
LPKCLIMN_00761 1.7e-131 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
LPKCLIMN_00762 6.2e-96 K Acetyltransferase (GNAT) domain
LPKCLIMN_00763 3.5e-160 pstS P Phosphate
LPKCLIMN_00764 1.1e-160 pstC P probably responsible for the translocation of the substrate across the membrane
LPKCLIMN_00765 8.3e-157 pstA P Phosphate transport system permease protein PstA
LPKCLIMN_00766 1.1e-147 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LPKCLIMN_00767 2.7e-140 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
LPKCLIMN_00768 2.6e-118 phoU P Plays a role in the regulation of phosphate uptake
LPKCLIMN_00769 7.5e-283 S C4-dicarboxylate anaerobic carrier
LPKCLIMN_00770 5.8e-85 dps P Belongs to the Dps family
LPKCLIMN_00772 3.2e-164 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LPKCLIMN_00773 4.8e-128 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LPKCLIMN_00774 4.1e-175 rihB 3.2.2.1 F Nucleoside
LPKCLIMN_00775 4e-133 gntR K UbiC transcription regulator-associated domain protein
LPKCLIMN_00776 2e-52 S Enterocin A Immunity
LPKCLIMN_00777 8.9e-139 glcR K DeoR C terminal sensor domain
LPKCLIMN_00778 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
LPKCLIMN_00779 1.6e-120 C nitroreductase
LPKCLIMN_00780 1.1e-132
LPKCLIMN_00781 1.6e-252 yhdP S Transporter associated domain
LPKCLIMN_00782 5.7e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
LPKCLIMN_00783 2.9e-235 potE E amino acid
LPKCLIMN_00784 2.6e-137 M Glycosyl hydrolases family 25
LPKCLIMN_00785 3.8e-208 yfmL 3.6.4.13 L DEAD DEAH box helicase
LPKCLIMN_00786 8.6e-251 celB 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LPKCLIMN_00788 3.1e-217 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
LPKCLIMN_00789 8e-88 gtcA S Teichoic acid glycosylation protein
LPKCLIMN_00790 8.5e-78 fld C Flavodoxin
LPKCLIMN_00791 6.7e-161 map 3.4.11.18 E Methionine Aminopeptidase
LPKCLIMN_00792 1.6e-166 yihY S Belongs to the UPF0761 family
LPKCLIMN_00793 2.3e-170 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
LPKCLIMN_00794 2.5e-155 3.6.4.12 S PD-(D/E)XK nuclease family transposase
LPKCLIMN_00795 2.7e-163 dnaI L Primosomal protein DnaI
LPKCLIMN_00796 2.3e-251 dnaB L Replication initiation and membrane attachment
LPKCLIMN_00797 1e-81 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LPKCLIMN_00798 1.3e-105 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LPKCLIMN_00799 1.1e-160 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
LPKCLIMN_00800 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LPKCLIMN_00801 5.7e-230 ygeX 4.3.1.15, 4.3.1.19 E Pyridoxal-phosphate dependent enzyme
LPKCLIMN_00802 5.3e-211 EGP Major facilitator Superfamily
LPKCLIMN_00803 4e-69 rmaI K Transcriptional regulator
LPKCLIMN_00804 5.9e-12
LPKCLIMN_00805 1.2e-76 K UTRA
LPKCLIMN_00806 2.8e-254 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
LPKCLIMN_00807 1.2e-117 cutC P Participates in the control of copper homeostasis
LPKCLIMN_00808 2.4e-197 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LPKCLIMN_00809 5.9e-94 S Glycine/sarcosine/betaine reductase selenoprotein B (GRDB)
LPKCLIMN_00810 3.9e-181 aspG 3.4.19.5, 3.5.1.1, 3.5.1.26 E Asparaginase
LPKCLIMN_00811 6.1e-257 3.5.1.18 E Peptidase family M20/M25/M40
LPKCLIMN_00812 8.3e-131 ymfC K UTRA
LPKCLIMN_00813 7.4e-123 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LPKCLIMN_00814 1.6e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
LPKCLIMN_00815 3.3e-15 3.6.4.12 S PD-(D/E)XK nuclease family transposase
LPKCLIMN_00816 4.4e-42 3.6.4.12 S PD-(D/E)XK nuclease family transposase
LPKCLIMN_00817 3e-124 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
LPKCLIMN_00818 2.1e-227 ecsB U ABC transporter
LPKCLIMN_00819 3.1e-133 ecsA V ABC transporter, ATP-binding protein
LPKCLIMN_00820 2.4e-77 hit FG Scavenger mRNA decapping enzyme C-term binding
LPKCLIMN_00821 2e-64
LPKCLIMN_00822 4.4e-37 S YtxH-like protein
LPKCLIMN_00823 4.3e-153 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
LPKCLIMN_00824 1.6e-185 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
LPKCLIMN_00825 0.0 L AAA domain
LPKCLIMN_00826 1.1e-231 yhaO L Ser Thr phosphatase family protein
LPKCLIMN_00827 3.3e-56 yheA S Belongs to the UPF0342 family
LPKCLIMN_00828 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
LPKCLIMN_00829 3.6e-162 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LPKCLIMN_00830 1.6e-96 L Belongs to the 'phage' integrase family
LPKCLIMN_00831 6.7e-107 V Abi-like protein
LPKCLIMN_00832 5.5e-225 KQ helix_turn_helix, mercury resistance
LPKCLIMN_00833 1.3e-209 rfbB 4.2.1.46 M Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily
LPKCLIMN_00834 7.2e-169 rfbA 2.7.7.24 H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LPKCLIMN_00835 8.8e-118 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
LPKCLIMN_00836 6.3e-190 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
LPKCLIMN_00838 4.5e-76 S HIRAN
LPKCLIMN_00840 1e-162 htpX O Peptidase family M48
LPKCLIMN_00841 7e-32
LPKCLIMN_00842 1.4e-223 patA 2.6.1.1 E Aminotransferase
LPKCLIMN_00843 6.1e-81 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
LPKCLIMN_00844 2.4e-144 E GDSL-like Lipase/Acylhydrolase family
LPKCLIMN_00845 3.8e-107 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LPKCLIMN_00846 1.3e-159 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
LPKCLIMN_00847 1e-156 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
LPKCLIMN_00848 1.5e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
LPKCLIMN_00849 4.1e-40 yqeY S YqeY-like protein
LPKCLIMN_00850 4.7e-174 phoH T phosphate starvation-inducible protein PhoH
LPKCLIMN_00851 1.2e-91 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LPKCLIMN_00852 1.1e-169 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LPKCLIMN_00853 1.6e-137 recO L Involved in DNA repair and RecF pathway recombination
LPKCLIMN_00854 3.6e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
LPKCLIMN_00855 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
LPKCLIMN_00856 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
LPKCLIMN_00857 2.9e-199 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
LPKCLIMN_00858 2.5e-121 trmK 2.1.1.217 S SAM-dependent methyltransferase
LPKCLIMN_00859 3.2e-152 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LPKCLIMN_00860 5.4e-247 pepT 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
LPKCLIMN_00861 9.6e-59 yvoA_1 K Transcriptional regulator, GntR family
LPKCLIMN_00862 3.3e-124 skfE V ATPases associated with a variety of cellular activities
LPKCLIMN_00863 2.1e-138
LPKCLIMN_00864 2.3e-108
LPKCLIMN_00865 8.1e-22
LPKCLIMN_00866 1e-104 lepB 3.4.21.89 U Belongs to the peptidase S26 family
LPKCLIMN_00867 4e-133
LPKCLIMN_00868 1.1e-167
LPKCLIMN_00869 4.4e-229 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
LPKCLIMN_00870 3.5e-52 ybjQ S Belongs to the UPF0145 family
LPKCLIMN_00871 1.7e-161 XK27_05540 S DUF218 domain
LPKCLIMN_00872 5.1e-153 yxeH S hydrolase
LPKCLIMN_00873 2.3e-303 I Protein of unknown function (DUF2974)
LPKCLIMN_00874 9.9e-61 yabR J S1 RNA binding domain
LPKCLIMN_00875 2.3e-60 divIC D Septum formation initiator
LPKCLIMN_00876 1.8e-34 yabO J S4 domain protein
LPKCLIMN_00877 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LPKCLIMN_00878 3.9e-104 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
LPKCLIMN_00879 8.1e-182 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
LPKCLIMN_00880 2.4e-124 S (CBS) domain
LPKCLIMN_00881 1.1e-217 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LPKCLIMN_00882 8.5e-60 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
LPKCLIMN_00883 7.7e-261 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
LPKCLIMN_00884 2.9e-262 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
LPKCLIMN_00885 8e-41 rpmE2 J Ribosomal protein L31
LPKCLIMN_00886 7.1e-284 ybeC E amino acid
LPKCLIMN_00887 6.9e-136 XK27_08845 S ABC transporter, ATP-binding protein
LPKCLIMN_00888 4.9e-141 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
LPKCLIMN_00889 1e-187 ABC-SBP S ABC transporter
LPKCLIMN_00890 0.0 rafA 3.2.1.22 G alpha-galactosidase
LPKCLIMN_00891 1.4e-231 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
LPKCLIMN_00892 2.6e-282 pipD E Dipeptidase
LPKCLIMN_00893 9.3e-08
LPKCLIMN_00894 9.3e-80
LPKCLIMN_00895 4.9e-67 S Putative adhesin
LPKCLIMN_00896 6.7e-188 eno2 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
LPKCLIMN_00897 2.4e-22 eno2 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
LPKCLIMN_00898 7.1e-40
LPKCLIMN_00899 8.6e-186 yfdV S Membrane transport protein
LPKCLIMN_00900 0.0 oxc 4.1.1.8 EH Belongs to the TPP enzyme family
LPKCLIMN_00901 1.8e-272 frc 2.8.3.16, 2.8.3.19 C Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate
LPKCLIMN_00902 2.6e-94
LPKCLIMN_00903 3.9e-98 ogt 2.1.1.63, 3.2.2.20 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LPKCLIMN_00904 3.1e-58 yjdF S Protein of unknown function (DUF2992)
LPKCLIMN_00905 2.1e-50 S Domain of unknown function (DUF4160)
LPKCLIMN_00906 7.9e-51
LPKCLIMN_00908 5.7e-44 yjdF S Protein of unknown function (DUF2992)
LPKCLIMN_00909 1.8e-112 1.6.5.2 S Flavodoxin-like fold
LPKCLIMN_00910 2.1e-257 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LPKCLIMN_00911 9.6e-121 spaE S ABC-2 family transporter protein
LPKCLIMN_00912 1.8e-130 mutF V ABC transporter, ATP-binding protein
LPKCLIMN_00913 4.4e-242 nhaC C Na H antiporter NhaC
LPKCLIMN_00914 9.6e-163 salL 2.5.1.63, 2.5.1.94 K S-adenosyl-l-methionine hydroxide adenosyltransferase
LPKCLIMN_00915 3.3e-95 S UPF0397 protein
LPKCLIMN_00916 0.0 ykoD P ABC transporter, ATP-binding protein
LPKCLIMN_00917 3.1e-142 cbiQ P cobalt transport
LPKCLIMN_00918 3.2e-119 ybhL S Belongs to the BI1 family
LPKCLIMN_00919 0.0 rtpR 1.1.98.6, 1.17.4.1, 1.17.4.2 F ribonucleoside-triphosphate reductase activity
LPKCLIMN_00920 4.2e-65 S Domain of unknown function (DUF4430)
LPKCLIMN_00921 8.1e-88 S ECF transporter, substrate-specific component
LPKCLIMN_00922 2.1e-94 yvqK 1.2.1.88, 1.5.5.2, 2.5.1.17 S cob(I)alamin adenosyltransferase
LPKCLIMN_00923 4.4e-129 L Helix-turn-helix domain
LPKCLIMN_00924 2.3e-23 L hmm pf00665
LPKCLIMN_00925 1.2e-39 L hmm pf00665
LPKCLIMN_00926 9.6e-152 S hydrolase
LPKCLIMN_00928 3.6e-168 yegS 2.7.1.107 G Lipid kinase
LPKCLIMN_00929 2.7e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LPKCLIMN_00930 8.1e-271 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
LPKCLIMN_00931 4.3e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LPKCLIMN_00932 1.7e-207 camS S sex pheromone
LPKCLIMN_00933 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LPKCLIMN_00934 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
LPKCLIMN_00935 9.4e-115 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
LPKCLIMN_00936 5.3e-102 S ECF transporter, substrate-specific component
LPKCLIMN_00938 6.7e-86 ydcK S Belongs to the SprT family
LPKCLIMN_00939 7e-135 M Glycosyltransferase sugar-binding region containing DXD motif
LPKCLIMN_00940 2.1e-258 epsU S Polysaccharide biosynthesis protein
LPKCLIMN_00941 4.7e-229 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
LPKCLIMN_00942 7e-147
LPKCLIMN_00943 1.2e-288 V ABC transporter transmembrane region
LPKCLIMN_00944 1.2e-180 E ABC transporter, ATP-binding protein
LPKCLIMN_00945 1.6e-288 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
LPKCLIMN_00946 1.9e-68 O OsmC-like protein
LPKCLIMN_00947 7.1e-20 ltrA S Bacterial low temperature requirement A protein (LtrA)
LPKCLIMN_00948 9.2e-115 2.7.6.5 T Region found in RelA / SpoT proteins
LPKCLIMN_00949 2.4e-116 K response regulator
LPKCLIMN_00950 1.2e-233 sptS 2.7.13.3 T Histidine kinase
LPKCLIMN_00951 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
LPKCLIMN_00952 2.4e-56
LPKCLIMN_00953 2.8e-58
LPKCLIMN_00954 0.0 pepN 3.4.11.2 E aminopeptidase
LPKCLIMN_00955 3.4e-143 S haloacid dehalogenase-like hydrolase
LPKCLIMN_00956 1.8e-122 S CAAX protease self-immunity
LPKCLIMN_00958 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
LPKCLIMN_00959 6.6e-72
LPKCLIMN_00960 9.6e-109 fic D Fic/DOC family
LPKCLIMN_00961 6.2e-226 I transferase activity, transferring acyl groups other than amino-acyl groups
LPKCLIMN_00962 1.7e-218 S Phage integrase family
LPKCLIMN_00968 5.3e-26 S Domain of unknown function (DUF4145)
LPKCLIMN_00969 6.7e-74 3.4.21.88 K Peptidase S24-like
LPKCLIMN_00970 2.9e-11 cro K Helix-turn-helix XRE-family like proteins
LPKCLIMN_00971 1.3e-84 K ORF6N domain
LPKCLIMN_00972 7.3e-27
LPKCLIMN_00975 2.9e-27
LPKCLIMN_00976 5.6e-35
LPKCLIMN_00977 5.1e-19
LPKCLIMN_00981 1.3e-69 S AAA domain
LPKCLIMN_00984 3.5e-167 S helicase activity
LPKCLIMN_00987 1.8e-28 S Protein of unknown function (DUF669)
LPKCLIMN_00989 9.2e-256 S Phage plasmid primase, P4
LPKCLIMN_00990 2.4e-07
LPKCLIMN_00991 4.3e-152 S haloacid dehalogenase-like hydrolase
LPKCLIMN_00992 2.8e-205 EGP Major facilitator Superfamily
LPKCLIMN_00993 1.1e-261 glnA 6.3.1.2 E glutamine synthetase
LPKCLIMN_00994 9.7e-169 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LPKCLIMN_00995 1.1e-18 S Protein of unknown function (DUF3042)
LPKCLIMN_00996 1.5e-57 yqhL P Rhodanese-like protein
LPKCLIMN_00997 6e-35 yqgQ S Bacterial protein of unknown function (DUF910)
LPKCLIMN_00998 2.4e-119 gluP 3.4.21.105 S Rhomboid family
LPKCLIMN_00999 5.6e-87 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LPKCLIMN_01000 7.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
LPKCLIMN_01001 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
LPKCLIMN_01002 0.0 S membrane
LPKCLIMN_01003 4e-65 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
LPKCLIMN_01004 1.3e-204 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LPKCLIMN_01005 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
LPKCLIMN_01006 8.1e-204 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LPKCLIMN_01007 1.1e-62 yodB K Transcriptional regulator, HxlR family
LPKCLIMN_01008 9.6e-138 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LPKCLIMN_01009 3.8e-44 acyP 3.6.1.7 C Belongs to the acylphosphatase family
LPKCLIMN_01010 1.1e-170 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
LPKCLIMN_01011 9.2e-281 arlS 2.7.13.3 T Histidine kinase
LPKCLIMN_01012 1.1e-130 K response regulator
LPKCLIMN_01013 2.9e-96 yceD S Uncharacterized ACR, COG1399
LPKCLIMN_01014 5.8e-219 ylbM S Belongs to the UPF0348 family
LPKCLIMN_01015 8.2e-60 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
LPKCLIMN_01016 1.7e-110 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
LPKCLIMN_01017 4.4e-120 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LPKCLIMN_01018 7.3e-211 yqeH S Ribosome biogenesis GTPase YqeH
LPKCLIMN_01019 3.5e-91 yqeG S HAD phosphatase, family IIIA
LPKCLIMN_01020 9.8e-191 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
LPKCLIMN_01021 6.6e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LPKCLIMN_01022 2.4e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
LPKCLIMN_01023 4e-87 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LPKCLIMN_01024 1.3e-131 S domain protein
LPKCLIMN_01025 4.8e-171 V ABC transporter
LPKCLIMN_01026 1.9e-74 S Protein of unknown function (DUF3021)
LPKCLIMN_01027 4.7e-73 K LytTr DNA-binding domain
LPKCLIMN_01029 1e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LPKCLIMN_01030 2.7e-82 yueI S Protein of unknown function (DUF1694)
LPKCLIMN_01031 3e-240 rarA L recombination factor protein RarA
LPKCLIMN_01033 5.2e-81 usp6 T universal stress protein
LPKCLIMN_01034 7.3e-225 rodA D Belongs to the SEDS family
LPKCLIMN_01035 1.3e-34 S Protein of unknown function (DUF2969)
LPKCLIMN_01036 2e-51 yidD S Could be involved in insertion of integral membrane proteins into the membrane
LPKCLIMN_01037 2.5e-15 S DNA-directed RNA polymerase subunit beta
LPKCLIMN_01038 2.2e-179 mbl D Cell shape determining protein MreB Mrl
LPKCLIMN_01039 2e-30 ywzB S Protein of unknown function (DUF1146)
LPKCLIMN_01040 1.1e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
LPKCLIMN_01041 3.3e-248 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LPKCLIMN_01042 1.4e-170 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LPKCLIMN_01043 5.1e-284 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LPKCLIMN_01044 5.7e-92 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LPKCLIMN_01045 5.9e-51 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LPKCLIMN_01046 1.2e-26 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LPKCLIMN_01047 1.6e-126 atpB C it plays a direct role in the translocation of protons across the membrane
LPKCLIMN_01048 1.8e-113 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LPKCLIMN_01049 1.2e-188 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
LPKCLIMN_01050 5.4e-158 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
LPKCLIMN_01051 1e-196 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LPKCLIMN_01052 5.5e-112 tdk 2.7.1.21 F thymidine kinase
LPKCLIMN_01053 4.9e-262 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain
LPKCLIMN_01054 7.2e-197 ampC V Beta-lactamase
LPKCLIMN_01057 1.4e-72
LPKCLIMN_01058 3.2e-104 EGP Major facilitator Superfamily
LPKCLIMN_01059 5.6e-88 EGP Major facilitator Superfamily
LPKCLIMN_01060 5.4e-261 pgi 5.3.1.9 G Belongs to the GPI family
LPKCLIMN_01061 1.4e-107 vanZ V VanZ like family
LPKCLIMN_01062 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
LPKCLIMN_01063 1.5e-269 T PhoQ Sensor
LPKCLIMN_01064 9e-130 K Transcriptional regulatory protein, C terminal
LPKCLIMN_01065 9.2e-68 S SdpI/YhfL protein family
LPKCLIMN_01066 2.9e-192 manA 5.3.1.8 G mannose-6-phosphate isomerase
LPKCLIMN_01067 1.8e-80 patB 4.4.1.8 E Aminotransferase, class I
LPKCLIMN_01068 1e-76 M Protein of unknown function (DUF3737)
LPKCLIMN_01069 9.2e-181 lacR K Transcriptional regulator
LPKCLIMN_01070 1.4e-225 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
LPKCLIMN_01071 5.2e-289 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
LPKCLIMN_01072 1.6e-193 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
LPKCLIMN_01073 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
LPKCLIMN_01074 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
LPKCLIMN_01075 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
LPKCLIMN_01076 1.1e-90 S Short repeat of unknown function (DUF308)
LPKCLIMN_01077 6e-160 rapZ S Displays ATPase and GTPase activities
LPKCLIMN_01078 4.4e-194 ybhK S Required for morphogenesis under gluconeogenic growth conditions
LPKCLIMN_01079 6.2e-171 whiA K May be required for sporulation
LPKCLIMN_01080 2.1e-100 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
LPKCLIMN_01081 1.2e-277 ycaM E amino acid
LPKCLIMN_01083 2.3e-187 cggR K Putative sugar-binding domain
LPKCLIMN_01084 3.2e-189 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
LPKCLIMN_01085 6e-227 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
LPKCLIMN_01086 1.9e-141 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
LPKCLIMN_01087 3.1e-245 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
LPKCLIMN_01088 2.5e-28 secG U Preprotein translocase
LPKCLIMN_01089 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
LPKCLIMN_01090 2.3e-78 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
LPKCLIMN_01091 1e-107 3.2.2.20 K acetyltransferase
LPKCLIMN_01093 2.3e-91
LPKCLIMN_01094 2.9e-93
LPKCLIMN_01095 1.2e-155 ycsE S Sucrose-6F-phosphate phosphohydrolase
LPKCLIMN_01096 3.1e-135 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LPKCLIMN_01097 2.4e-234 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LPKCLIMN_01098 5.1e-234 S Putative peptidoglycan binding domain
LPKCLIMN_01099 1.2e-94 M NlpC P60 family protein
LPKCLIMN_01101 1.3e-99 gmk2 2.7.4.8 F Guanylate kinase
LPKCLIMN_01102 9e-44
LPKCLIMN_01103 3.9e-279 S O-antigen ligase like membrane protein
LPKCLIMN_01104 1.8e-110
LPKCLIMN_01105 4e-64 nrdI F NrdI Flavodoxin like
LPKCLIMN_01106 3.3e-180 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LPKCLIMN_01107 4.1e-81
LPKCLIMN_01108 4.7e-60 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
LPKCLIMN_01109 1.8e-40
LPKCLIMN_01110 9.6e-80 S Threonine/Serine exporter, ThrE
LPKCLIMN_01111 1.5e-138 thrE S Putative threonine/serine exporter
LPKCLIMN_01112 2.8e-285 S ABC transporter, ATP-binding protein
LPKCLIMN_01113 8.5e-63
LPKCLIMN_01114 3.6e-39
LPKCLIMN_01115 3e-212 brpA K Cell envelope-like function transcriptional attenuator common domain protein
LPKCLIMN_01116 0.0 pepF E oligoendopeptidase F
LPKCLIMN_01118 1.4e-257 lctP C L-lactate permease
LPKCLIMN_01119 5.1e-134 znuB U ABC 3 transport family
LPKCLIMN_01120 2.8e-117 fhuC P ABC transporter
LPKCLIMN_01121 8.9e-159 psaA P Belongs to the bacterial solute-binding protein 9 family
LPKCLIMN_01122 1.6e-42 K helix_turn_helix, Arsenical Resistance Operon Repressor
LPKCLIMN_01123 6.9e-139 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
LPKCLIMN_01124 0.0 M domain protein
LPKCLIMN_01125 1.1e-306 M domain protein
LPKCLIMN_01126 9.9e-23 M domain protein
LPKCLIMN_01127 5.4e-118 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LPKCLIMN_01128 3.8e-128 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
LPKCLIMN_01129 6.8e-170 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
LPKCLIMN_01130 2.1e-94 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
LPKCLIMN_01131 2.4e-181 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
LPKCLIMN_01132 3.1e-242 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
LPKCLIMN_01133 1.1e-211 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
LPKCLIMN_01134 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
LPKCLIMN_01135 3.3e-92 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
LPKCLIMN_01136 4.5e-105 pncA Q Isochorismatase family
LPKCLIMN_01137 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
LPKCLIMN_01138 5.7e-126 alkD L DNA alkylation repair enzyme
LPKCLIMN_01139 2.9e-128 XK27_06785 V ABC transporter, ATP-binding protein
LPKCLIMN_01140 0.0 XK27_06780 V ABC transporter permease
LPKCLIMN_01141 0.0 pepO 3.4.24.71 O Peptidase family M13
LPKCLIMN_01142 4.8e-257 lysC 2.7.2.4 E Belongs to the aspartokinase family
LPKCLIMN_01143 2.1e-199 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LPKCLIMN_01144 1.6e-282 thrC 4.2.3.1 E Threonine synthase
LPKCLIMN_01145 5.3e-231 hom1 1.1.1.3 E homoserine dehydrogenase
LPKCLIMN_01146 3.3e-158 thrB 2.7.1.39 F Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
LPKCLIMN_01147 1.4e-116 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
LPKCLIMN_01148 3.4e-98 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
LPKCLIMN_01149 1.9e-58 M Lysin motif
LPKCLIMN_01150 1.8e-130 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
LPKCLIMN_01151 2.9e-105 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LPKCLIMN_01152 1.1e-135 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
LPKCLIMN_01153 3.1e-62 ribT K acetyltransferase
LPKCLIMN_01154 2.5e-169 xerD D recombinase XerD
LPKCLIMN_01155 1.5e-166 cvfB S S1 domain
LPKCLIMN_01156 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
LPKCLIMN_01157 8e-182 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
LPKCLIMN_01159 0.0 dnaE 2.7.7.7 L DNA polymerase
LPKCLIMN_01160 2.1e-28 S Protein of unknown function (DUF2929)
LPKCLIMN_01161 4.3e-310 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
LPKCLIMN_01162 1.3e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
LPKCLIMN_01163 7.5e-47 yrvD S Lipopolysaccharide assembly protein A domain
LPKCLIMN_01164 9.3e-144 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
LPKCLIMN_01165 1.4e-178 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
LPKCLIMN_01166 0.0 oatA I Acyltransferase
LPKCLIMN_01167 3.5e-241 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LPKCLIMN_01168 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
LPKCLIMN_01169 0.0 pacL 3.6.3.8 P P-type ATPase
LPKCLIMN_01170 3.6e-154 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
LPKCLIMN_01171 2e-285 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LPKCLIMN_01172 0.0 tuaG GT2 M Glycosyltransferase like family 2
LPKCLIMN_01173 2.9e-204 csaB M Glycosyl transferases group 1
LPKCLIMN_01174 4.2e-141 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
LPKCLIMN_01175 1.5e-67 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
LPKCLIMN_01176 9.5e-124 gntR1 K UTRA
LPKCLIMN_01177 9.3e-190
LPKCLIMN_01178 1.4e-52 P Rhodanese Homology Domain
LPKCLIMN_01181 1.2e-166 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
LPKCLIMN_01182 1.8e-145 K SIS domain
LPKCLIMN_01184 1.4e-189 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
LPKCLIMN_01185 1.7e-59 yjgN S Bacterial protein of unknown function (DUF898)
LPKCLIMN_01187 4.8e-99 M LysM domain protein
LPKCLIMN_01188 1.3e-110 M LysM domain protein
LPKCLIMN_01189 5.5e-135 S Putative ABC-transporter type IV
LPKCLIMN_01190 2.3e-61 psiE S Phosphate-starvation-inducible E
LPKCLIMN_01191 3.4e-94 K acetyltransferase
LPKCLIMN_01192 1e-149 3.6.4.12 S PD-(D/E)XK nuclease family transposase
LPKCLIMN_01194 5.1e-164 yvgN C Aldo keto reductase
LPKCLIMN_01195 8.1e-249 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
LPKCLIMN_01196 1.6e-282 lsa S ABC transporter
LPKCLIMN_01197 6.7e-121 S GyrI-like small molecule binding domain
LPKCLIMN_01198 2.9e-193 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
LPKCLIMN_01199 8.5e-78 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LPKCLIMN_01200 0.0 dnaK O Heat shock 70 kDa protein
LPKCLIMN_01201 1.6e-171 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
LPKCLIMN_01202 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
LPKCLIMN_01203 9.3e-124 srtA 3.4.22.70 M sortase family
LPKCLIMN_01204 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
LPKCLIMN_01205 1.3e-96 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LPKCLIMN_01206 1.1e-278 yjeM E Amino Acid
LPKCLIMN_01207 3.5e-285 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LPKCLIMN_01208 9.4e-191 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
LPKCLIMN_01209 1.6e-96 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LPKCLIMN_01210 3e-251 G Major Facilitator
LPKCLIMN_01211 0.0 3.2.1.177 GH31 G Glycosyl hydrolases family 31
LPKCLIMN_01212 1.6e-266 dtpT U amino acid peptide transporter
LPKCLIMN_01213 2.9e-208 naiP EGP Major facilitator Superfamily
LPKCLIMN_01214 2.5e-155 S Alpha beta hydrolase
LPKCLIMN_01215 4.6e-76 K Transcriptional regulator, MarR family
LPKCLIMN_01216 0.0 XK27_09600 V ABC transporter, ATP-binding protein
LPKCLIMN_01217 0.0 V ABC transporter transmembrane region
LPKCLIMN_01218 1.3e-148 glnH ET ABC transporter
LPKCLIMN_01219 2.7e-137 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
LPKCLIMN_01220 9.1e-150 glnH ET ABC transporter
LPKCLIMN_01221 3.2e-110 gluC P ABC transporter permease
LPKCLIMN_01222 2e-107 glnP P ABC transporter permease
LPKCLIMN_01223 1.3e-156 3.6.4.12 S PD-(D/E)XK nuclease family transposase
LPKCLIMN_01224 0.0 treC 3.2.1.93 GH13 G Alpha amylase, catalytic domain protein
LPKCLIMN_01225 1.1e-130 treR K UTRA
LPKCLIMN_01226 0.0 treB 2.7.1.211 G phosphotransferase system
LPKCLIMN_01227 6.9e-101 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
LPKCLIMN_01228 4.8e-90 ypmB S Protein conserved in bacteria
LPKCLIMN_01229 2.9e-259 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
LPKCLIMN_01230 6.7e-116 dnaD L DnaD domain protein
LPKCLIMN_01231 1.2e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LPKCLIMN_01232 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
LPKCLIMN_01233 1.6e-117 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
LPKCLIMN_01234 4.2e-106 ypsA S Belongs to the UPF0398 family
LPKCLIMN_01235 2e-71 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
LPKCLIMN_01236 2.4e-217 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
LPKCLIMN_01237 2.2e-240 cpdA S Calcineurin-like phosphoesterase
LPKCLIMN_01238 1.2e-174 degV S DegV family
LPKCLIMN_01239 9.9e-58
LPKCLIMN_01240 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
LPKCLIMN_01241 2.3e-78 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LPKCLIMN_01242 1.3e-173 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
LPKCLIMN_01243 3.3e-197 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
LPKCLIMN_01244 9.6e-217 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LPKCLIMN_01245 3.2e-259 qacA EGP Major facilitator Superfamily
LPKCLIMN_01246 5.5e-118 3.6.1.27 I Acid phosphatase homologues
LPKCLIMN_01247 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
LPKCLIMN_01248 7.1e-303 ytgP S Polysaccharide biosynthesis protein
LPKCLIMN_01249 2.2e-218 I Protein of unknown function (DUF2974)
LPKCLIMN_01250 8e-121
LPKCLIMN_01251 3.8e-151 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
LPKCLIMN_01252 8.3e-125 M ErfK YbiS YcfS YnhG
LPKCLIMN_01253 1.1e-172 dacA 3.4.16.4 M Belongs to the peptidase S11 family
LPKCLIMN_01254 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
LPKCLIMN_01255 6.5e-173 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
LPKCLIMN_01256 2.4e-50
LPKCLIMN_01257 6.9e-77 yjaB 2.3.1.181 K Acetyltransferase (GNAT) domain
LPKCLIMN_01258 1.2e-57 1.14.99.57 S Antibiotic biosynthesis monooxygenase
LPKCLIMN_01261 2.7e-210 pepA E M42 glutamyl aminopeptidase
LPKCLIMN_01262 5.8e-82
LPKCLIMN_01263 6.1e-73 K helix_turn_helix multiple antibiotic resistance protein
LPKCLIMN_01264 1.5e-32
LPKCLIMN_01265 6.4e-199 mdtG EGP Major facilitator Superfamily
LPKCLIMN_01266 3.3e-112 3.6.1.27 I Acid phosphatase homologues
LPKCLIMN_01267 5.7e-169 glsA 3.5.1.2 E Belongs to the glutaminase family
LPKCLIMN_01268 3.7e-260 P Sodium:sulfate symporter transmembrane region
LPKCLIMN_01269 0.0 1.3.5.4 C FMN_bind
LPKCLIMN_01270 8.2e-165 K LysR family
LPKCLIMN_01271 1e-201 S PFAM Archaeal ATPase
LPKCLIMN_01272 5.7e-293 lacG 3.2.1.85 G Belongs to the glycosyl hydrolase 1 family
LPKCLIMN_01273 0.0 celB 2.7.1.196, 2.7.1.205, 2.7.1.207 G Phosphotransferase system, EIIC
LPKCLIMN_01274 8.7e-57 lacF 2.7.1.196, 2.7.1.205, 2.7.1.207 G PTS system, Lactose/Cellobiose specific IIA subunit
LPKCLIMN_01275 2e-152 lacT K CAT RNA binding domain
LPKCLIMN_01276 9.8e-117 plsC 2.3.1.51 I Acyltransferase
LPKCLIMN_01277 3e-195 yabB 2.1.1.223 L Methyltransferase small domain
LPKCLIMN_01278 9.6e-141 rpsB J Belongs to the universal ribosomal protein uS2 family
LPKCLIMN_01279 1.7e-182 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LPKCLIMN_01280 1.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
LPKCLIMN_01281 3.4e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
LPKCLIMN_01282 1.4e-135 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LPKCLIMN_01283 3.4e-138 cdsA 2.7.7.41 S Belongs to the CDS family
LPKCLIMN_01284 1.2e-230 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
LPKCLIMN_01285 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
LPKCLIMN_01286 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LPKCLIMN_01287 4.7e-82 rimP J Required for maturation of 30S ribosomal subunits
LPKCLIMN_01288 1.1e-217 nusA K Participates in both transcription termination and antitermination
LPKCLIMN_01289 7.3e-280 E amino acid
LPKCLIMN_01290 2.2e-134 cysA V ABC transporter, ATP-binding protein
LPKCLIMN_01291 0.0 V FtsX-like permease family
LPKCLIMN_01292 8e-125 pgm3 G Phosphoglycerate mutase family
LPKCLIMN_01293 1.8e-25
LPKCLIMN_01294 1.3e-52
LPKCLIMN_01295 3.2e-149 xth 3.1.11.2 L exodeoxyribonuclease III
LPKCLIMN_01296 0.0 ptsG 2.7.1.199, 2.7.1.208 G phosphotransferase system, EIIB
LPKCLIMN_01297 8.2e-128 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
LPKCLIMN_01298 6.7e-145 rpiR1 K Helix-turn-helix domain, rpiR family
LPKCLIMN_01299 2.3e-48 dacA 3.4.16.4 M Belongs to the peptidase S11 family
LPKCLIMN_01300 5.6e-258 3.4.16.4 M ErfK YbiS YcfS YnhG
LPKCLIMN_01301 0.0 3.6.3.8 P ATPase, P-type (transporting), HAD superfamily, subfamily IC
LPKCLIMN_01302 1.1e-07 3.6.3.8 P P-type ATPase
LPKCLIMN_01303 6.9e-251 yfnA E Amino Acid
LPKCLIMN_01304 0.0 clpE2 O AAA domain (Cdc48 subfamily)
LPKCLIMN_01305 9.4e-156 S Alpha/beta hydrolase of unknown function (DUF915)
LPKCLIMN_01306 2.2e-243 pts13C 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
LPKCLIMN_01307 1.1e-39
LPKCLIMN_01308 6.2e-216 lmrP E Major Facilitator Superfamily
LPKCLIMN_01309 1.2e-174 pbpX2 V Beta-lactamase
LPKCLIMN_01310 4.5e-252 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
LPKCLIMN_01311 3.9e-37 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LPKCLIMN_01312 5.5e-236 dltB M MBOAT, membrane-bound O-acyltransferase family
LPKCLIMN_01313 2.1e-290 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
LPKCLIMN_01315 2.8e-45
LPKCLIMN_01316 1.7e-199 ywhK S Membrane
LPKCLIMN_01317 3.5e-66
LPKCLIMN_01319 3.4e-100 S LexA-binding, inner membrane-associated putative hydrolase
LPKCLIMN_01320 1.1e-104 K LysR substrate binding domain
LPKCLIMN_01321 5.3e-180 lacX 5.1.3.3 G Aldose 1-epimerase
LPKCLIMN_01322 8.2e-252 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
LPKCLIMN_01323 9.7e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
LPKCLIMN_01324 2.5e-172 xerC D Phage integrase, N-terminal SAM-like domain
LPKCLIMN_01325 3e-248 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
LPKCLIMN_01326 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LPKCLIMN_01327 6.6e-156 dprA LU DNA protecting protein DprA
LPKCLIMN_01328 9.8e-135 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LPKCLIMN_01329 3.2e-158 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LPKCLIMN_01330 1.3e-265 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
LPKCLIMN_01331 9.2e-36 yozE S Belongs to the UPF0346 family
LPKCLIMN_01332 2.6e-152 DegV S Uncharacterised protein, DegV family COG1307
LPKCLIMN_01333 0.0 aha1 P E1-E2 ATPase
LPKCLIMN_01334 2.5e-189 ansA 3.5.1.1 EJ L-asparaginase, type I
LPKCLIMN_01335 2.2e-257 yjjP S Putative threonine/serine exporter
LPKCLIMN_01336 2.3e-170 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
LPKCLIMN_01337 7.2e-261 frdC 1.3.5.4 C FAD binding domain
LPKCLIMN_01338 3.8e-265 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
LPKCLIMN_01339 2.8e-67 metI P ABC transporter permease
LPKCLIMN_01340 1.6e-188 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LPKCLIMN_01341 1.8e-156 metQ1 P Belongs to the nlpA lipoprotein family
LPKCLIMN_01342 1.5e-60 L nuclease
LPKCLIMN_01343 1.2e-116 F DNA/RNA non-specific endonuclease
LPKCLIMN_01344 2.8e-235 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
LPKCLIMN_01345 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
LPKCLIMN_01346 0.0 3.6.3.8 P P-type ATPase
LPKCLIMN_01347 4.2e-211 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
LPKCLIMN_01348 7.8e-126 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
LPKCLIMN_01349 5e-229 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LPKCLIMN_01350 2.1e-216 iscS2 2.8.1.7 E Aminotransferase class V
LPKCLIMN_01351 1.9e-223 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
LPKCLIMN_01352 0.0 S peptidoglycan catabolic process
LPKCLIMN_01353 2.8e-142 S Phage tail protein
LPKCLIMN_01354 3.7e-211 S Phage minor structural protein
LPKCLIMN_01355 1.3e-62 S N-acetylmuramoyl-L-alanine amidase activity
LPKCLIMN_01358 3.7e-08
LPKCLIMN_01360 1e-168 S peptidoglycan catabolic process
LPKCLIMN_01361 3e-08
LPKCLIMN_01362 1.6e-159 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
LPKCLIMN_01363 6.1e-160 rbsU U ribose uptake protein RbsU
LPKCLIMN_01364 3.9e-66 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
LPKCLIMN_01365 8e-84 6.3.3.2 S ASCH
LPKCLIMN_01366 1.2e-134 2.4.2.3 F Phosphorylase superfamily
LPKCLIMN_01367 1.5e-88 2.3.1.57 K Acetyltransferase (GNAT) family
LPKCLIMN_01368 1.4e-98 rimL J Acetyltransferase (GNAT) domain
LPKCLIMN_01369 2.5e-43
LPKCLIMN_01370 2.7e-51 S endonuclease activity
LPKCLIMN_01371 3.6e-151 S Fic/DOC family
LPKCLIMN_01372 6e-143 3.1.3.48 T Tyrosine phosphatase family
LPKCLIMN_01373 5.6e-40
LPKCLIMN_01374 1.4e-135
LPKCLIMN_01375 2.1e-63
LPKCLIMN_01376 1.6e-48 S MazG-like family
LPKCLIMN_01377 1.9e-152 S Protein of unknown function (DUF2785)
LPKCLIMN_01378 1.2e-22 K Acetyltransferase (GNAT) domain
LPKCLIMN_01379 4.5e-36 K Acetyltransferase (GNAT) domain
LPKCLIMN_01380 1.1e-48
LPKCLIMN_01381 6.5e-282 V ABC transporter transmembrane region
LPKCLIMN_01382 2.2e-73 arpU S Phage transcriptional regulator, ArpU family
LPKCLIMN_01383 1.1e-73 S HNH endonuclease
LPKCLIMN_01384 6.8e-75 S Phage terminase, small subunit
LPKCLIMN_01385 1.6e-226 S Phage Terminase
LPKCLIMN_01387 1.2e-158 S Phage portal protein
LPKCLIMN_01388 1.4e-111 S Clp protease
LPKCLIMN_01389 4.2e-196 S peptidase activity
LPKCLIMN_01390 2.1e-37 S Phage gp6-like head-tail connector protein
LPKCLIMN_01394 2.5e-09 S Pfam:Phage_TTP_1
LPKCLIMN_01396 9.6e-19 S peptidoglycan catabolic process
LPKCLIMN_01397 3e-76 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
LPKCLIMN_01398 5.5e-11 IQ Oxidoreductase, short chain dehydrogenase reductase family protein
LPKCLIMN_01399 5.1e-231 4.2.1.6, 5.1.2.2 M Mandelate racemase muconate lactonizing enzyme
LPKCLIMN_01400 2.7e-48
LPKCLIMN_01401 2e-67 K HxlR family
LPKCLIMN_01402 5.9e-17 L Plasmid pRiA4b ORF-3-like protein
LPKCLIMN_01403 4.7e-12 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
LPKCLIMN_01404 2.2e-249 brnQ U Component of the transport system for branched-chain amino acids
LPKCLIMN_01405 4.4e-71 S Putative adhesin
LPKCLIMN_01406 7.4e-120 3.6.1.55 F NUDIX domain
LPKCLIMN_01407 6e-111 yihX 3.1.3.10, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
LPKCLIMN_01408 5.7e-302
LPKCLIMN_01410 1.4e-43 M domain protein
LPKCLIMN_01411 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M Penicillin binding protein transpeptidase domain
LPKCLIMN_01412 2.4e-275 pepV 3.5.1.18 E dipeptidase PepV
LPKCLIMN_01413 8e-268 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
LPKCLIMN_01414 2e-55
LPKCLIMN_01415 1.2e-266 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
LPKCLIMN_01416 9.1e-98 yutD S Protein of unknown function (DUF1027)
LPKCLIMN_01417 3.6e-148 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
LPKCLIMN_01418 8.6e-105 S Protein of unknown function (DUF1461)
LPKCLIMN_01419 2.7e-117 dedA S SNARE-like domain protein
LPKCLIMN_01420 4.8e-179 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
LPKCLIMN_01421 1.1e-59 yugI 5.3.1.9 J general stress protein
LPKCLIMN_01422 1.8e-28 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
LPKCLIMN_01423 4.4e-37 L Transposase
LPKCLIMN_01424 8.9e-18 L Transposase
LPKCLIMN_01425 0.0 cas3 L CRISPR-associated helicase cas3
LPKCLIMN_01426 0.0 casA L An automated process has identified a potential problem with this gene model
LPKCLIMN_01427 3.3e-101 casB S CRISPR system CASCADE complex protein CasB
LPKCLIMN_01428 8.6e-185 casC L CT1975-like protein
LPKCLIMN_01429 3.4e-132 casD S CRISPR system CASCADE complex protein CasD
LPKCLIMN_01430 4.8e-106 casE S CRISPR system CASCADE complex protein CasE
LPKCLIMN_01431 6.6e-91 cas1 L CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
LPKCLIMN_01432 5.2e-20 cas2 2.7.7.7 L CRISPR-associated endoribonuclease Cas2
LPKCLIMN_01433 7.7e-29 cas2 2.7.7.7 L CRISPR-associated endoribonuclease Cas2
LPKCLIMN_01434 7.2e-20 cas2 2.7.7.7 L CRISPR-associated endoribonuclease Cas2
LPKCLIMN_01435 3.1e-186 rgpD 3.6.3.38 GM ABC transporter
LPKCLIMN_01436 4.6e-130 rgpC GM Transport permease protein
LPKCLIMN_01437 2.2e-168 rgpB GT2 M Glycosyltransferase, group 2 family protein
LPKCLIMN_01438 2.9e-215 rgpA GT4 M Domain of unknown function (DUF1972)
LPKCLIMN_01439 8.1e-136 S Predicted membrane protein (DUF2142)
LPKCLIMN_01440 8.4e-150 tagF 2.7.8.12 M Glycosyl transferase, family 2
LPKCLIMN_01441 1.1e-175 amrA S polysaccharide biosynthetic process
LPKCLIMN_01442 5e-46 XK27_09090 S Uncharacterized conserved protein (DUF2304)
LPKCLIMN_01443 4.2e-116 ycbB S Glycosyl transferase family 2
LPKCLIMN_01444 1.1e-158 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
LPKCLIMN_01445 3.2e-103 yagU S Protein of unknown function (DUF1440)
LPKCLIMN_01446 4.7e-151 S hydrolase
LPKCLIMN_01447 8.6e-132 K Transcriptional regulator
LPKCLIMN_01448 5.6e-242 pyrP F Permease
LPKCLIMN_01449 1.3e-137 lacR K DeoR C terminal sensor domain
LPKCLIMN_01450 9.4e-74 lacA 5.3.1.26 G Ribose/Galactose Isomerase
LPKCLIMN_01451 1.9e-106 rpiB 2.1.1.222, 2.1.1.64, 5.3.1.26, 5.3.1.6 G Ribose/Galactose Isomerase
LPKCLIMN_01452 1.6e-128 S Domain of unknown function (DUF4867)
LPKCLIMN_01453 7.2e-86 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
LPKCLIMN_01454 6.3e-51 2.7.1.200, 2.7.1.204 G PTS system, Lactose/Cellobiose specific IIB subunit
LPKCLIMN_01455 2.8e-268 gatC G PTS system sugar-specific permease component
LPKCLIMN_01456 1.3e-38
LPKCLIMN_01457 3.1e-73
LPKCLIMN_01458 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
LPKCLIMN_01459 1.1e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
LPKCLIMN_01460 7.3e-74 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
LPKCLIMN_01461 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LPKCLIMN_01462 1.4e-65
LPKCLIMN_01463 4.6e-174 prmA J Ribosomal protein L11 methyltransferase
LPKCLIMN_01464 3e-87 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LPKCLIMN_01465 3e-295 V ABC-type multidrug transport system, ATPase and permease components
LPKCLIMN_01466 5.8e-139 K transcriptional regulator PlcR
LPKCLIMN_01467 1e-149
LPKCLIMN_01468 4.2e-292 V ABC transporter
LPKCLIMN_01469 2.1e-82 nprA K sequence-specific DNA binding
LPKCLIMN_01470 3.6e-140 2.7.1.176 O Zeta toxin
LPKCLIMN_01471 5.3e-23
LPKCLIMN_01473 1.5e-83 yujD V AAA domain, putative AbiEii toxin, Type IV TA system
LPKCLIMN_01474 3.5e-179 S bacteriocin-associated integral membrane protein
LPKCLIMN_01476 1.9e-155 XK27_00025 K Transcriptional
LPKCLIMN_01478 1.2e-144 S Peptidase_C39 like family
LPKCLIMN_01479 2.7e-59
LPKCLIMN_01480 1.2e-40 1.3.1.71, 2.1.1.334 O methyltransferase activity
LPKCLIMN_01481 1e-102 mleP3 S Membrane transport protein
LPKCLIMN_01482 6.8e-139 S CAAX amino terminal protease
LPKCLIMN_01483 1.4e-144 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
LPKCLIMN_01484 1.5e-256 emrY EGP Major facilitator Superfamily
LPKCLIMN_01485 4e-262 emrY EGP Major facilitator Superfamily
LPKCLIMN_01486 4.4e-94 yxdD K Bacterial regulatory proteins, tetR family
LPKCLIMN_01487 0.0 4.2.1.53 S Myosin-crossreactive antigen
LPKCLIMN_01488 1.4e-77 2.3.1.128 K acetyltransferase
LPKCLIMN_01489 2.3e-23 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
LPKCLIMN_01490 1.8e-292 hsdM 2.1.1.72 V type I restriction-modification system
LPKCLIMN_01491 2.6e-134
LPKCLIMN_01492 0.0 KL domain protein
LPKCLIMN_01493 9.4e-231 S Tetratricopeptide repeat protein
LPKCLIMN_01494 2e-40 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
LPKCLIMN_01495 1e-240 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
LPKCLIMN_01496 1.1e-19 rpsA 1.17.7.4 J Ribosomal protein S1
LPKCLIMN_01497 7.9e-69 ogt 2.1.1.63 L methylated-DNA-[protein]-cysteine S-methyltransferase activity
LPKCLIMN_01498 2.5e-86 XK27_09675 K Acetyltransferase (GNAT) domain
LPKCLIMN_01499 1e-124 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
LPKCLIMN_01500 6.8e-245 yrvN L AAA C-terminal domain
LPKCLIMN_01501 3e-34 4.1.1.45 S Amidohydrolase
LPKCLIMN_01502 6.6e-105 4.1.1.45 S Amidohydrolase
LPKCLIMN_01503 9e-122 ybhL S Belongs to the BI1 family
LPKCLIMN_01504 2.9e-14 C Aldo/keto reductase family
LPKCLIMN_01505 1.1e-74 C Aldo/keto reductase family
LPKCLIMN_01506 5.1e-167 akr5f 1.1.1.346 S reductase
LPKCLIMN_01507 1.8e-124 magIII L Base excision DNA repair protein, HhH-GPD family
LPKCLIMN_01508 2.6e-109 lacA 2.3.1.79 S Transferase hexapeptide repeat
LPKCLIMN_01509 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
LPKCLIMN_01510 6.3e-55 ftsL D Cell division protein FtsL
LPKCLIMN_01511 1.3e-176 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
LPKCLIMN_01512 4.1e-77 mraZ K Belongs to the MraZ family
LPKCLIMN_01513 6.1e-52 S Protein of unknown function (DUF3397)
LPKCLIMN_01514 3.6e-13 S Protein of unknown function (DUF4044)
LPKCLIMN_01515 5.4e-95 mreD
LPKCLIMN_01516 1e-143 mreC M Involved in formation and maintenance of cell shape
LPKCLIMN_01517 6.4e-166 mreB D cell shape determining protein MreB
LPKCLIMN_01518 9.5e-112 radC L DNA repair protein
LPKCLIMN_01519 3.4e-97 J Acetyltransferase (GNAT) domain
LPKCLIMN_01520 1.5e-36 uvrX 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LPKCLIMN_01521 5.9e-55
LPKCLIMN_01522 8.7e-60
LPKCLIMN_01523 1.1e-49
LPKCLIMN_01524 1e-257 yheS_2 S ATPase components of ABC transporters with duplicated ATPase domains
LPKCLIMN_01525 2e-217 EGP Transmembrane secretion effector
LPKCLIMN_01526 4.3e-22
LPKCLIMN_01527 2.8e-65 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
LPKCLIMN_01529 1.5e-52 K TfoX N-terminal domain
LPKCLIMN_01530 1.1e-12
LPKCLIMN_01532 2.2e-16
LPKCLIMN_01534 6.8e-31
LPKCLIMN_01535 1e-18
LPKCLIMN_01536 1.3e-75 K LytTr DNA-binding domain
LPKCLIMN_01537 2.8e-51 S Protein of unknown function (DUF3021)
LPKCLIMN_01538 3e-98 K Acetyltransferase (GNAT) domain
LPKCLIMN_01539 7.9e-132 ybbM S Uncharacterised protein family (UPF0014)
LPKCLIMN_01540 2e-112 ybbL S ABC transporter, ATP-binding protein
LPKCLIMN_01541 6.6e-124 3.6.4.12 S PD-(D/E)XK nuclease family transposase
LPKCLIMN_01542 1.8e-41 K peptidyl-tyrosine sulfation
LPKCLIMN_01543 1.1e-42
LPKCLIMN_01544 5.6e-52
LPKCLIMN_01545 9e-71 K Transcriptional regulator
LPKCLIMN_01546 1.1e-179 MA20_14895 S Conserved hypothetical protein 698
LPKCLIMN_01547 6.9e-245 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
LPKCLIMN_01548 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
LPKCLIMN_01549 1.5e-124 yoaK S Protein of unknown function (DUF1275)
LPKCLIMN_01550 7.7e-111 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LPKCLIMN_01551 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
LPKCLIMN_01552 2.8e-171 ppaC 3.6.1.1 C inorganic pyrophosphatase
LPKCLIMN_01553 2.2e-179 K Transcriptional regulator
LPKCLIMN_01554 1e-142 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LPKCLIMN_01555 5.8e-183 3.6.3.30 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
LPKCLIMN_01556 9.2e-187 P Bacterial extracellular solute-binding protein
LPKCLIMN_01557 1.1e-121 S Domain of unknown function (DUF1868)
LPKCLIMN_01558 2.9e-190 galE 5.1.3.2 M GDP-mannose 4,6 dehydratase
LPKCLIMN_01559 2.8e-287 galT 2.7.7.12 H Galactose-1-phosphate uridyl transferase, C-terminal domain
LPKCLIMN_01560 0.0 1.3.5.4 C FMN_bind
LPKCLIMN_01561 4.2e-118 drgA C nitroreductase
LPKCLIMN_01562 2.8e-28
LPKCLIMN_01563 8.4e-50
LPKCLIMN_01564 2e-42 rpiB 5.3.1.26, 5.3.1.6 G Ribose/Galactose Isomerase
LPKCLIMN_01565 0.0 XK27_00340 3.1.3.5 F Belongs to the 5'-nucleotidase family
LPKCLIMN_01566 0.0 hsdR 3.1.21.3 V EcoEI R protein C-terminal
LPKCLIMN_01567 4.1e-119 3.1.21.3 V Type I restriction modification DNA specificity domain
LPKCLIMN_01568 6.2e-76 K Transcriptional regulator
LPKCLIMN_01569 5.5e-50 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
LPKCLIMN_01570 6.9e-80 glxR 1.1.1.31, 1.1.1.60 I Dehydrogenase
LPKCLIMN_01571 2.1e-96 K Acetyltransferase (GNAT) family
LPKCLIMN_01572 1.5e-112 rcfA 4.1.99.16, 4.2.3.22, 4.2.3.75 K Transcriptional regulator, Crp Fnr family
LPKCLIMN_01573 1.4e-93 dps P Belongs to the Dps family
LPKCLIMN_01574 4.6e-35 copZ C Heavy-metal-associated domain
LPKCLIMN_01575 0.0 cadA 3.6.3.3, 3.6.3.5 P E1-E2 ATPase
LPKCLIMN_01576 5.5e-50 K LytTr DNA-binding domain
LPKCLIMN_01577 2e-105 speG J Acetyltransferase (GNAT) domain
LPKCLIMN_01578 1e-09 K sequence-specific DNA binding
LPKCLIMN_01579 1.3e-54 K sequence-specific DNA binding
LPKCLIMN_01580 1.2e-141 S Protein of unknown function (DUF975)
LPKCLIMN_01581 1.6e-128 qmcA O prohibitin homologues
LPKCLIMN_01582 2e-149 ropB K Helix-turn-helix domain
LPKCLIMN_01583 9.1e-13 F DNA/RNA non-specific endonuclease
LPKCLIMN_01584 9.2e-42 K Helix-turn-helix domain
LPKCLIMN_01585 1.1e-310 ybiT S ABC transporter, ATP-binding protein
LPKCLIMN_01586 3.7e-18 S Sugar efflux transporter for intercellular exchange
LPKCLIMN_01587 1.6e-246 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
LPKCLIMN_01588 2.2e-102 3.6.1.27 I Acid phosphatase homologues
LPKCLIMN_01590 1.4e-144 lysR5 K LysR substrate binding domain
LPKCLIMN_01592 0.0 S domain, Protein
LPKCLIMN_01593 1.5e-124 M Glycosyltransferase sugar-binding region containing DXD motif
LPKCLIMN_01594 2.9e-90 pssE S Glycosyltransferase family 28 C-terminal domain
LPKCLIMN_01595 6.8e-83 cpsF M Oligosaccharide biosynthesis protein Alg14 like
LPKCLIMN_01596 1.7e-122 rfbP M Bacterial sugar transferase
LPKCLIMN_01597 1.7e-145 ywqE 3.1.3.48 GM PHP domain protein
LPKCLIMN_01598 3.3e-125 ywqD 2.7.10.1 D Capsular exopolysaccharide family
LPKCLIMN_01599 1.5e-142 epsB M biosynthesis protein
LPKCLIMN_01600 6.7e-163 brpA K Cell envelope-like function transcriptional attenuator common domain protein
LPKCLIMN_01601 7.6e-177 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
LPKCLIMN_01602 1.4e-167 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LPKCLIMN_01603 7.9e-61 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LPKCLIMN_01604 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LPKCLIMN_01605 6e-46 rplGA J ribosomal protein
LPKCLIMN_01606 2e-46 ylxR K Protein of unknown function (DUF448)
LPKCLIMN_01607 8.2e-182 lacI3 K helix_turn _helix lactose operon repressor
LPKCLIMN_01608 0.0 malL 3.2.1.10 GH13 G Alpha amylase, catalytic domain protein
LPKCLIMN_01609 6.8e-72 2.7.1.191 G PTS system fructose IIA component
LPKCLIMN_01610 3.4e-152 G PTS system mannose/fructose/sorbose family IID component
LPKCLIMN_01611 1.2e-103 G PTS system sorbose-specific iic component
LPKCLIMN_01612 5.9e-88 2.7.1.191 G PTS system sorbose subfamily IIB component
LPKCLIMN_01613 0.0 oppA E ABC transporter substrate-binding protein
LPKCLIMN_01614 4.2e-77 K MerR HTH family regulatory protein
LPKCLIMN_01615 3.6e-266 lmrB EGP Major facilitator Superfamily
LPKCLIMN_01616 1.1e-98 S Domain of unknown function (DUF4811)
LPKCLIMN_01617 4.3e-70 pnb C nitroreductase
LPKCLIMN_01618 2.7e-85 ykuL S (CBS) domain
LPKCLIMN_01619 0.0 cadA P P-type ATPase
LPKCLIMN_01620 9.3e-201 napA P Sodium/hydrogen exchanger family
LPKCLIMN_01622 6.3e-199 V ABC transporter transmembrane region
LPKCLIMN_01624 4.7e-49 K Helix-turn-helix
LPKCLIMN_01625 1.1e-32 D nuclear chromosome segregation
LPKCLIMN_01626 5.1e-72
LPKCLIMN_01627 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
LPKCLIMN_01628 1.9e-232 cycA E Amino acid permease
LPKCLIMN_01629 1.4e-40 T PhoQ Sensor
LPKCLIMN_01630 1.2e-132 KT Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
LPKCLIMN_01631 0.0 kdpA 3.6.3.12 P Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
LPKCLIMN_01632 2.2e-97 kdpB 3.6.3.12 P Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
LPKCLIMN_01633 3e-176 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
LPKCLIMN_01634 4.4e-169 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
LPKCLIMN_01635 1.1e-191 yhjX P Major Facilitator Superfamily
LPKCLIMN_01636 9.5e-177 I Carboxylesterase family
LPKCLIMN_01637 3.6e-165 rhaS6 K helix_turn_helix, arabinose operon control protein
LPKCLIMN_01638 7.3e-169 2.7.1.2 GK ROK family
LPKCLIMN_01639 1.5e-79 pepC 3.4.22.40 E Peptidase C1-like family
LPKCLIMN_01640 1.2e-41 yphH S Cupin domain
LPKCLIMN_01641 1.8e-292 V ABC-type multidrug transport system, ATPase and permease components
LPKCLIMN_01642 3.2e-292 P ABC transporter
LPKCLIMN_01643 2.9e-218 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
LPKCLIMN_01644 3.5e-222 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
LPKCLIMN_01645 9.3e-217 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
LPKCLIMN_01646 1.7e-139 D Alpha beta
LPKCLIMN_01647 2.5e-186 2.7.1.194, 2.7.1.202, 2.7.1.204 G bglG family
LPKCLIMN_01648 3.6e-45 ulaB 2.7.1.194, 2.7.1.204 G pts system
LPKCLIMN_01649 2.5e-237 ulaA 2.7.1.194 S PTS system sugar-specific permease component
LPKCLIMN_01650 8.5e-159 tktN 2.2.1.1 G Transketolase
LPKCLIMN_01651 6.2e-171 tktC 2.2.1.1 G Transketolase
LPKCLIMN_01652 3.2e-161 degV S EDD domain protein, DegV family
LPKCLIMN_01653 3.7e-151
LPKCLIMN_01654 6.7e-167 K Transcriptional regulator
LPKCLIMN_01655 4.9e-204 xerS L Belongs to the 'phage' integrase family
LPKCLIMN_01656 9.6e-169 S TerB-C domain
LPKCLIMN_01657 5.4e-253 P P-loop Domain of unknown function (DUF2791)
LPKCLIMN_01658 0.0 lhr L DEAD DEAH box helicase
LPKCLIMN_01659 9.6e-106 tag 3.2.2.20 L glycosylase
LPKCLIMN_01660 3.2e-194 S Bacteriocin helveticin-J
LPKCLIMN_01661 1.8e-83 yebR 1.8.4.14 T GAF domain-containing protein
LPKCLIMN_01662 2.2e-111 ylbE GM NAD(P)H-binding
LPKCLIMN_01663 2.5e-129 yfeJ 6.3.5.2 F Glutamine amidotransferase class-I
LPKCLIMN_01664 3.2e-95 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
LPKCLIMN_01666 3.3e-19
LPKCLIMN_01667 5.6e-132 V abc transporter atp-binding protein
LPKCLIMN_01668 9.4e-121 K Transcriptional regulatory protein, C terminal
LPKCLIMN_01669 5.8e-72 2.7.13.3 T Histidine kinase
LPKCLIMN_01670 5.2e-187 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
LPKCLIMN_01671 1.6e-272 V ABC-type multidrug transport system, ATPase and permease components
LPKCLIMN_01672 7.2e-256 V ABC-type multidrug transport system, ATPase and permease components
LPKCLIMN_01673 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LPKCLIMN_01674 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
LPKCLIMN_01675 3e-156 ycjC K sequence-specific DNA binding
LPKCLIMN_01676 8e-166 S dextransucrase activity
LPKCLIMN_01677 3.6e-146 S dextransucrase activity
LPKCLIMN_01678 6.5e-187 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
LPKCLIMN_01679 6.1e-300 mdlB V ABC transporter
LPKCLIMN_01680 1.4e-209 mdlA V ABC transporter
LPKCLIMN_01681 7e-153 hel M HAD superfamily, subfamily IIIB (Acid phosphatase)
LPKCLIMN_01682 2.4e-178 S Protein of unknown function (DUF3644)
LPKCLIMN_01683 3.6e-46
LPKCLIMN_01684 1.8e-37 GT2 M Glycosyl transferase family 2
LPKCLIMN_01685 9.1e-20 V Glycosyl transferase, family 2
LPKCLIMN_01687 3.3e-43 S VRR_NUC
LPKCLIMN_01695 4.3e-13
LPKCLIMN_01697 2.1e-82 ebsA S Family of unknown function (DUF5322)
LPKCLIMN_01698 0.0 rgpF M Rhamnan synthesis protein F
LPKCLIMN_01699 6.4e-69 GT4 M transferase activity, transferring glycosyl groups
LPKCLIMN_01700 3.9e-263 bamA UW LPXTG-motif cell wall anchor domain protein
LPKCLIMN_01701 1.7e-231 E Alpha/beta hydrolase of unknown function (DUF1100)
LPKCLIMN_01702 2.1e-117 GM NAD(P)H-binding
LPKCLIMN_01703 7.2e-68
LPKCLIMN_01704 1.6e-64 S Domain of unknown function DUF1828
LPKCLIMN_01705 7.4e-88 S Rib/alpha-like repeat
LPKCLIMN_01706 5e-246 yagE E amino acid
LPKCLIMN_01707 1e-87 glpF P Major intrinsic protein
LPKCLIMN_01708 1.4e-191 yjbB G Major Facilitator Superfamily
LPKCLIMN_01709 1.9e-57 L Transposase
LPKCLIMN_01710 1.4e-14
LPKCLIMN_01711 1.9e-09
LPKCLIMN_01714 4.1e-31
LPKCLIMN_01716 3.2e-86 comEB 3.5.4.12 F ComE operon protein 2
LPKCLIMN_01717 5.4e-24
LPKCLIMN_01718 6.7e-11
LPKCLIMN_01720 2.2e-61 S Sulfite exporter TauE/SafE
LPKCLIMN_01721 1.9e-32 G Major facilitator Superfamily
LPKCLIMN_01722 1.8e-264 npr 1.11.1.1 C NADH oxidase
LPKCLIMN_01723 3.9e-47 ribH 2.5.1.78 H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin
LPKCLIMN_01724 1.1e-58 hsdS_1 3.1.21.3 V type I restriction modification DNA specificity domain protein
LPKCLIMN_01725 5.4e-86 S Bacteriophage abortive infection AbiH
LPKCLIMN_01726 1.7e-232 Z012_01130 S Fic/DOC family
LPKCLIMN_01727 0.0 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
LPKCLIMN_01728 8.9e-58
LPKCLIMN_01730 3.7e-129 S Domain of unknown function (DUF4393)
LPKCLIMN_01731 2e-23
LPKCLIMN_01732 1.1e-21 E Zn peptidase
LPKCLIMN_01733 2.5e-74 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
LPKCLIMN_01734 1.1e-115 ung2 3.2.2.27 L Uracil-DNA glycosylase
LPKCLIMN_01735 7.9e-114 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LPKCLIMN_01736 1.5e-34 ynzC S UPF0291 protein
LPKCLIMN_01737 1.5e-30 yneF S Uncharacterised protein family (UPF0154)
LPKCLIMN_01738 1.1e-219 glf 5.4.99.9 M UDP-galactopyranose mutase
LPKCLIMN_01739 8.6e-265 cps1C S Membrane protein involved in the export of O-antigen and teichoic acid
LPKCLIMN_01740 6.9e-47 galT 2.7.7.12 G UDPglucose--hexose-1-phosphate uridylyltransferase
LPKCLIMN_01741 7e-71 paaI Q protein, possibly involved in aromatic compounds catabolism
LPKCLIMN_01742 1.5e-244 dcm 2.1.1.37 H Cytosine-specific methyltransferase
LPKCLIMN_01743 5.5e-21 mleP S Sodium Bile acid symporter family
LPKCLIMN_01744 1.3e-55 E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LPKCLIMN_01745 2.6e-115 hlyIII S protein, hemolysin III
LPKCLIMN_01746 6e-227 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
LPKCLIMN_01747 3.8e-162 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
LPKCLIMN_01748 2.6e-09 S Protein of unknown function (DUF2975)
LPKCLIMN_01749 3.3e-22 yozG K Transcriptional regulator
LPKCLIMN_01750 5.5e-08
LPKCLIMN_01751 2e-76 L DNA helicase
LPKCLIMN_01755 0.0 prtS 3.4.21.96 O Belongs to the peptidase S8 family
LPKCLIMN_01756 4.1e-30 ribBA 3.5.4.25, 4.1.99.12 H Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate
LPKCLIMN_01757 3e-173 yobV1 K WYL domain
LPKCLIMN_01758 2.4e-68 S pyridoxamine 5-phosphate
LPKCLIMN_01759 7.9e-219 M teichoic acid biosynthesis
LPKCLIMN_01760 4.6e-58 licD3 M LicD family
LPKCLIMN_01761 6.1e-140 msrR K Cell envelope-related transcriptional attenuator domain
LPKCLIMN_01763 8.6e-21 traP L Protein of unknown function (DUF3991)
LPKCLIMN_01765 3e-47 dpnC 3.1.21.4 L type II site-specific deoxyribonuclease activity
LPKCLIMN_01766 1.5e-49 dpnC 3.1.21.4 J Recognizes the double-stranded and methylated sequence G(Me)ATC and cleaves after A-2
LPKCLIMN_01767 1.9e-19 XK26_04895
LPKCLIMN_01768 2.2e-57 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)