ORF_ID e_value Gene_name EC_number CAZy COGs Description
CLKPMBCM_00001 2.3e-31 K LytTr DNA-binding domain
CLKPMBCM_00002 7e-29 S Protein of unknown function (DUF3021)
CLKPMBCM_00003 4e-87 infC J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
CLKPMBCM_00004 2.4e-27 rpmI J Belongs to the bacterial ribosomal protein bL35 family
CLKPMBCM_00005 6.6e-57 rplT J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
CLKPMBCM_00006 1.2e-101 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CLKPMBCM_00007 7.8e-14 add 3.5.4.4 F Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
CLKPMBCM_00008 9e-87 yqeG S HAD phosphatase, family IIIA
CLKPMBCM_00009 8.9e-209 yqeH S Ribosome biogenesis GTPase YqeH
CLKPMBCM_00010 1.4e-115 nadD 2.7.7.18, 3.6.1.55 H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
CLKPMBCM_00011 3.9e-110 nadD 2.7.6.3, 2.7.7.18 H Hydrolase, HD family
CLKPMBCM_00012 3.7e-60 rsfS J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation
CLKPMBCM_00013 1.2e-213 ylbM S Belongs to the UPF0348 family
CLKPMBCM_00014 2.8e-91 yceD S Uncharacterized ACR, COG1399
CLKPMBCM_00015 1.4e-130 K response regulator
CLKPMBCM_00016 9.9e-267 arlS 2.7.13.3 T Histidine kinase
CLKPMBCM_00017 3.2e-162 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
CLKPMBCM_00018 1.5e-43 acyP 3.6.1.7 C Belongs to the acylphosphatase family
CLKPMBCM_00019 3.8e-134 spoU 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CLKPMBCM_00020 6.2e-63 yodB K Transcriptional regulator, HxlR family
CLKPMBCM_00021 3.4e-202 pheS 6.1.1.20 J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
CLKPMBCM_00022 0.0 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
CLKPMBCM_00023 1.5e-200 mltG S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CLKPMBCM_00024 6.9e-65 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CLKPMBCM_00025 0.0 S membrane
CLKPMBCM_00026 0.0 pbp2b 3.4.16.4 M Penicillin-binding Protein
CLKPMBCM_00027 7.2e-21 rpmG J Belongs to the bacterial ribosomal protein bL33 family
CLKPMBCM_00028 6e-89 ygfA 6.3.3.2 H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CLKPMBCM_00029 7.9e-115 gluP 3.4.21.105 S Rhomboid family
CLKPMBCM_00030 7.9e-35 yqgQ S Bacterial protein of unknown function (DUF910)
CLKPMBCM_00031 4.4e-57 yqhL P Rhodanese-like protein
CLKPMBCM_00032 8.1e-19 S Protein of unknown function (DUF3042)
CLKPMBCM_00033 5.3e-167 miaA 2.5.1.75 F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
CLKPMBCM_00034 1.1e-258 glnA 6.3.1.2 E glutamine synthetase
CLKPMBCM_00035 1.4e-204 EGP Major facilitator Superfamily
CLKPMBCM_00036 1.4e-150 S haloacid dehalogenase-like hydrolase
CLKPMBCM_00038 3.4e-177 D Alpha beta
CLKPMBCM_00039 1.6e-213 atoB 1.1.1.88, 2.3.1.9 I Belongs to the thiolase family
CLKPMBCM_00040 1.2e-214 mvaA 1.1.1.34, 1.1.1.88, 2.3.1.9 C Belongs to the HMG-CoA reductase family
CLKPMBCM_00041 4.2e-217 mvaS 2.3.3.10 I Hydroxymethylglutaryl-CoA synthase
CLKPMBCM_00042 2.8e-260 rumA 2.1.1.190, 2.1.1.35 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CLKPMBCM_00043 8.7e-145 recX 2.4.1.337 GT4 S Regulatory protein RecX
CLKPMBCM_00044 2e-111 ygaC J Belongs to the UPF0374 family
CLKPMBCM_00045 7.8e-88
CLKPMBCM_00046 8.8e-78
CLKPMBCM_00047 1.8e-156 hlyX S Transporter associated domain
CLKPMBCM_00048 5.1e-303 prfC J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
CLKPMBCM_00049 1.1e-43 XK27_09445 S Domain of unknown function (DUF1827)
CLKPMBCM_00050 0.0 clpE O Belongs to the ClpA ClpB family
CLKPMBCM_00051 1.7e-24
CLKPMBCM_00052 4.2e-40 ptsH G phosphocarrier protein HPR
CLKPMBCM_00053 0.0 ptsI 2.7.3.9 G General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CLKPMBCM_00054 5.2e-66 spxA 1.20.4.1 K Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress
CLKPMBCM_00055 2.1e-117 mecA NOT Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis
CLKPMBCM_00056 3.3e-158 coiA 3.6.4.12 S Competence protein
CLKPMBCM_00057 2.7e-103 yjbH Q Thioredoxin
CLKPMBCM_00058 2.9e-108 yjbK S CYTH
CLKPMBCM_00059 5.2e-113 yjbM 2.7.6.5 S RelA SpoT domain protein
CLKPMBCM_00060 1.2e-149 nadK 2.7.1.23 F Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
CLKPMBCM_00061 4.7e-168 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
CLKPMBCM_00062 0.0 mycA 4.2.1.53 S Myosin-crossreactive antigen
CLKPMBCM_00063 6.3e-232 N Uncharacterized conserved protein (DUF2075)
CLKPMBCM_00064 4.1e-200 pgl 3.1.1.31 G Lactonase, 7-bladed beta-propeller
CLKPMBCM_00065 8.6e-63 srlB 2.7.1.198 G PTS system glucitol/sorbitol-specific IIA component
CLKPMBCM_00066 2.8e-205 yubA S AI-2E family transporter
CLKPMBCM_00067 4.6e-105 trmL 2.1.1.207 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily
CLKPMBCM_00068 4.3e-74 WQ51_03320 S Protein of unknown function (DUF1149)
CLKPMBCM_00069 0.0 ftsK D Belongs to the FtsK SpoIIIE SftA family
CLKPMBCM_00070 5.7e-225 2.7.1.26, 2.7.7.2 S Peptidase M16 inactive domain protein
CLKPMBCM_00071 1.4e-226 S Peptidase M16
CLKPMBCM_00072 5.4e-130 IQ Enoyl-(Acyl carrier protein) reductase
CLKPMBCM_00073 4.4e-125 ymfM S Helix-turn-helix domain
CLKPMBCM_00074 3e-96 pgsA 2.7.8.41, 2.7.8.5 I Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CLKPMBCM_00075 3.9e-193 recA L Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
CLKPMBCM_00076 1e-197 rny S Endoribonuclease that initiates mRNA decay
CLKPMBCM_00077 3.5e-192 tagO 2.7.8.33, 2.7.8.35 M transferase
CLKPMBCM_00078 1.6e-117 yvyE 3.4.13.9 S YigZ family
CLKPMBCM_00079 2.8e-221 comFA L Helicase C-terminal domain protein
CLKPMBCM_00080 5.9e-123 comFC S Competence protein
CLKPMBCM_00081 1.3e-96 hpf J Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CLKPMBCM_00082 0.0 secA U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane
CLKPMBCM_00083 1.2e-183 prfB J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CLKPMBCM_00085 2.6e-172 hprK F Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
CLKPMBCM_00086 2.5e-155 lgt 2.1.1.199 M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
CLKPMBCM_00087 3.1e-184 gpsA 1.1.1.94 I Glycerol-3-phosphate dehydrogenase
CLKPMBCM_00088 1.1e-172 trxB 1.8.1.9 C Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
CLKPMBCM_00089 4.2e-157 lacR K Transcriptional regulator
CLKPMBCM_00090 1.2e-203 galK 2.7.1.6 F Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
CLKPMBCM_00091 1e-252 galT 2.7.7.12 G UDP-glucose--hexose-1-phosphate uridylyltransferase
CLKPMBCM_00092 2.1e-185 galM 5.1.3.3 G Catalyzes the interconversion of alpha and beta anomers of maltose
CLKPMBCM_00093 0.0 pgm 5.4.2.2, 5.4.2.8 G Phosphoglucomutase phosphomannomutase, alpha beta alpha domain
CLKPMBCM_00094 0.0 uvrB L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage
CLKPMBCM_00095 0.0 uvrA L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate
CLKPMBCM_00096 8.1e-91 S Short repeat of unknown function (DUF308)
CLKPMBCM_00097 1e-159 rapZ S Displays ATPase and GTPase activities
CLKPMBCM_00098 2.2e-193 ybhK S Required for morphogenesis under gluconeogenic growth conditions
CLKPMBCM_00099 1.1e-170 whiA K May be required for sporulation
CLKPMBCM_00100 2.1e-100 clpP 3.4.21.92 O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins
CLKPMBCM_00101 3.1e-139 ycaM E amino acid
CLKPMBCM_00102 9.7e-129 ycaM E amino acid
CLKPMBCM_00104 1.4e-187 cggR K Putative sugar-binding domain
CLKPMBCM_00105 3.2e-189 gap 1.2.1.12 G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
CLKPMBCM_00106 1e-226 pgk 2.7.2.3, 5.3.1.1 F Belongs to the phosphoglycerate kinase family
CLKPMBCM_00107 1.1e-141 tpiA 2.7.2.3, 5.3.1.1 G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P)
CLKPMBCM_00108 4e-245 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CLKPMBCM_00109 1.9e-28 secG U Preprotein translocase
CLKPMBCM_00110 0.0 rnr J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs
CLKPMBCM_00111 2.5e-77 smpB J the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA
CLKPMBCM_00112 1.4e-104 3.2.2.20 K acetyltransferase
CLKPMBCM_00113 7.1e-77
CLKPMBCM_00114 5.8e-94
CLKPMBCM_00115 1.1e-153 ycsE S Sucrose-6F-phosphate phosphohydrolase
CLKPMBCM_00116 2.8e-136 ung 3.2.2.27 L Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
CLKPMBCM_00117 1.2e-177 pta 2.3.1.8, 3.6.3.21 C phosphate acetyltransferase
CLKPMBCM_00118 2.2e-84 ydiB 2.7.1.221, 5.1.1.1 O Hydrolase, P-loop family
CLKPMBCM_00119 1.2e-99 dnaQ 2.7.7.7 L DNA polymerase III
CLKPMBCM_00120 9e-167 murB 1.3.1.98 M Cell wall formation
CLKPMBCM_00121 2.7e-202 potA 3.6.3.30, 3.6.3.31 P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system
CLKPMBCM_00122 2.1e-130 potB P ABC transporter permease
CLKPMBCM_00123 2.9e-137 potC P ABC transporter permease
CLKPMBCM_00124 4.3e-208 potD P ABC transporter
CLKPMBCM_00125 6.5e-151 dacA 2.7.7.85 S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
CLKPMBCM_00126 1.4e-170 ybbR S YbbR-like protein
CLKPMBCM_00127 4.5e-255 glmM 5.4.2.10 G Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CLKPMBCM_00128 1.4e-147 S Sucrose-6F-phosphate phosphohydrolase
CLKPMBCM_00129 2.3e-66 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CLKPMBCM_00130 5.9e-61 crcB U Important for reducing fluoride concentration in the cell, thus reducing its toxicity
CLKPMBCM_00131 4.7e-195 S Putative adhesin
CLKPMBCM_00132 1.2e-113
CLKPMBCM_00133 4.5e-143 yisY 1.11.1.10 S Alpha/beta hydrolase family
CLKPMBCM_00134 1.1e-161 znuA P Belongs to the bacterial solute-binding protein 9 family
CLKPMBCM_00135 1.4e-215 coaBC 4.1.1.36, 6.3.2.5 H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CLKPMBCM_00136 4.7e-96 S VanZ like family
CLKPMBCM_00137 1.5e-132 yebC K Transcriptional regulatory protein
CLKPMBCM_00138 1.4e-178 comGA NU Type II IV secretion system protein
CLKPMBCM_00139 1.9e-173 comGB NU type II secretion system
CLKPMBCM_00140 2.8e-40 comGC U Required for transformation and DNA binding
CLKPMBCM_00142 4e-84 comGF U Putative Competence protein ComGF
CLKPMBCM_00143 5.1e-179 ytxK 2.1.1.72 L N-6 DNA Methylase
CLKPMBCM_00144 5.6e-225 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CLKPMBCM_00146 1.2e-201 sacB 2.4.1.10, 2.4.1.9, 3.2.1.26 GH32,GH68 M Levansucrase/Invertase
CLKPMBCM_00147 5.5e-55 M Protein of unknown function (DUF3737)
CLKPMBCM_00148 1.2e-18 M Protein of unknown function (DUF3737)
CLKPMBCM_00149 6.2e-150 patB 4.4.1.8 E Aminotransferase, class I
CLKPMBCM_00150 5.9e-21 patB 4.4.1.8 E Aminotransferase, class I
CLKPMBCM_00151 1.7e-184 manA 5.3.1.8 G mannose-6-phosphate isomerase
CLKPMBCM_00152 6e-67 S SdpI/YhfL protein family
CLKPMBCM_00153 9.3e-127 K Transcriptional regulatory protein, C terminal
CLKPMBCM_00154 1.9e-267 T PhoQ Sensor
CLKPMBCM_00155 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
CLKPMBCM_00156 1.3e-105 vanZ V VanZ like family
CLKPMBCM_00157 1.9e-261 pgi 5.3.1.9 G Belongs to the GPI family
CLKPMBCM_00158 1.8e-40 EGP Major facilitator Superfamily
CLKPMBCM_00159 6.8e-62 EGP Major facilitator Superfamily
CLKPMBCM_00160 2.7e-53 EGP Major facilitator Superfamily
CLKPMBCM_00161 1.2e-68
CLKPMBCM_00164 7.2e-08
CLKPMBCM_00167 3.2e-81 S DNA primase
CLKPMBCM_00168 2.1e-34 S Bifunctional DNA primase/polymerase, N-terminal
CLKPMBCM_00169 1.7e-28
CLKPMBCM_00173 1.8e-08 S Helix-turn-helix domain
CLKPMBCM_00174 5.8e-18 K sequence-specific DNA binding
CLKPMBCM_00175 1.2e-107 sip L Belongs to the 'phage' integrase family
CLKPMBCM_00176 1.1e-189 ampC V Beta-lactamase
CLKPMBCM_00177 9.3e-261 murD 3.4.21.10, 6.3.2.13, 6.3.2.9 M Mur ligase, middle domain
CLKPMBCM_00178 4.6e-111 tdk 2.7.1.21 F thymidine kinase
CLKPMBCM_00179 1e-196 prfA J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
CLKPMBCM_00180 5.1e-156 prmB 2.1.1.297, 2.1.1.298 J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif
CLKPMBCM_00181 3.7e-182 ywlC 2.7.7.87, 3.1.3.48 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine
CLKPMBCM_00182 2.6e-112 upp 2.4.2.9 F Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
CLKPMBCM_00183 5e-128 atpB C it plays a direct role in the translocation of protons across the membrane
CLKPMBCM_00184 4.7e-26 atpE C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CLKPMBCM_00185 3.1e-52 atpF C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
CLKPMBCM_00186 4.5e-89 atpH C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
CLKPMBCM_00187 6.7e-284 atpA 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
CLKPMBCM_00188 1.2e-169 atpG C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
CLKPMBCM_00189 2.8e-247 atpD 3.6.3.14 C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
CLKPMBCM_00190 1.1e-72 atpC C Produces ATP from ADP in the presence of a proton gradient across the membrane
CLKPMBCM_00191 2.4e-31 ywzB S Protein of unknown function (DUF1146)
CLKPMBCM_00192 1.7e-179 mbl D Cell shape determining protein MreB Mrl
CLKPMBCM_00193 6.8e-13 S DNA-directed RNA polymerase subunit beta
CLKPMBCM_00194 3.8e-50 yidD S Could be involved in insertion of integral membrane proteins into the membrane
CLKPMBCM_00195 6.6e-34 S Protein of unknown function (DUF2969)
CLKPMBCM_00196 1.2e-222 rodA D Belongs to the SEDS family
CLKPMBCM_00197 5.2e-81 usp6 T universal stress protein
CLKPMBCM_00199 6.4e-235 rarA L recombination factor protein RarA
CLKPMBCM_00200 1.7e-81 yueI S Protein of unknown function (DUF1694)
CLKPMBCM_00201 1e-110 rpsD J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
CLKPMBCM_00203 1.3e-288 ezrA D modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
CLKPMBCM_00204 6.6e-215 iscS2 2.8.1.7 E Aminotransferase class V
CLKPMBCM_00205 1.4e-228 thiI 2.8.1.4 H Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CLKPMBCM_00206 2.6e-121 rsuA 5.4.99.19, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
CLKPMBCM_00207 3.5e-173 3.1.4.46 C Glycerophosphoryl diester phosphodiesterase family
CLKPMBCM_00208 0.0 3.6.3.8 P P-type ATPase
CLKPMBCM_00209 0.0 valS 6.1.1.9 J amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner
CLKPMBCM_00210 2.5e-231 folC 6.3.2.12, 6.3.2.17 H Belongs to the folylpolyglutamate synthase family
CLKPMBCM_00211 3.9e-122 S Haloacid dehalogenase-like hydrolase
CLKPMBCM_00212 2.1e-111 radC L DNA repair protein
CLKPMBCM_00213 2.7e-164 mreB D cell shape determining protein MreB
CLKPMBCM_00214 3.7e-138 mreC M Involved in formation and maintenance of cell shape
CLKPMBCM_00215 1.7e-93 mreD
CLKPMBCM_00216 3.6e-13 S Protein of unknown function (DUF4044)
CLKPMBCM_00217 4.6e-52 S Protein of unknown function (DUF3397)
CLKPMBCM_00218 4.1e-77 mraZ K Belongs to the MraZ family
CLKPMBCM_00219 7.1e-178 rsmH 2.1.1.199 J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA
CLKPMBCM_00220 8.3e-55 ftsL D Cell division protein FtsL
CLKPMBCM_00221 0.0 ftsI 3.4.16.4 M Penicillin-binding Protein
CLKPMBCM_00222 5.4e-178 mraY 2.7.8.13 M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CLKPMBCM_00223 3.4e-258 murD 6.3.2.9 M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
CLKPMBCM_00224 2e-208 murG 2.4.1.227, 6.3.2.8 GT28 M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
CLKPMBCM_00225 1.7e-151 divIB D Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex
CLKPMBCM_00226 5e-238 ftsA D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring
CLKPMBCM_00227 2e-242 ftsZ D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CLKPMBCM_00228 1.3e-62 sepF D Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA
CLKPMBCM_00229 1.3e-26 yggT S YGGT family
CLKPMBCM_00230 3.8e-145 ylmH S S4 domain protein
CLKPMBCM_00231 2e-114 gpsB D DivIVA domain protein
CLKPMBCM_00232 0.0 ileS 6.1.1.5 J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
CLKPMBCM_00233 2.3e-33 cspA K 'Cold-shock' DNA-binding domain
CLKPMBCM_00234 1.7e-102 nudF 3.6.1.13 L ADP-ribose pyrophosphatase
CLKPMBCM_00236 4.1e-127 mtnN 3.2.2.9 E Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CLKPMBCM_00237 1.4e-212 iscS 2.8.1.7 E Aminotransferase class V
CLKPMBCM_00238 2.8e-57 XK27_04120 S Putative amino acid metabolism
CLKPMBCM_00239 3.3e-219 mnmA 2.8.1.13 J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34
CLKPMBCM_00240 4.4e-123 pgm6 5.4.2.11, 5.4.2.12 G Phosphoglycerate mutase family
CLKPMBCM_00241 3.7e-114 S Repeat protein
CLKPMBCM_00242 0.0 recD2 3.1.11.5 L DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
CLKPMBCM_00243 5.6e-144 ytlR 2.7.1.91 I Diacylglycerol kinase catalytic domain
CLKPMBCM_00244 0.0 rnjA J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CLKPMBCM_00245 2.3e-34 ykzG S Belongs to the UPF0356 family
CLKPMBCM_00246 5.2e-101 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions
CLKPMBCM_00247 0.0 typA T GTP-binding protein TypA
CLKPMBCM_00248 6.1e-208 ftsW D Belongs to the SEDS family
CLKPMBCM_00249 7.4e-50 ylbG S UPF0298 protein
CLKPMBCM_00250 8.8e-93 rsmD 2.1.1.171 L RNA methyltransferase, RsmD family
CLKPMBCM_00251 1.1e-84 coaD 2.7.7.3 H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
CLKPMBCM_00252 9e-184 ylbL T Belongs to the peptidase S16 family
CLKPMBCM_00253 2.4e-79 comEA L Competence protein ComEA
CLKPMBCM_00254 0.0 comEC S Competence protein ComEC
CLKPMBCM_00255 1.3e-174 holA 2.7.7.7 L DNA polymerase III delta subunit
CLKPMBCM_00256 7.5e-34 rpsT J Binds directly to 16S ribosomal RNA
CLKPMBCM_00257 2e-42 rpsO J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
CLKPMBCM_00258 0.0 rnjB J An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
CLKPMBCM_00259 1.9e-158
CLKPMBCM_00260 1.5e-225 tuf J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
CLKPMBCM_00261 1e-203 tig D Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
CLKPMBCM_00262 5e-232 clpX O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
CLKPMBCM_00263 1.7e-102 engB D Necessary for normal cell division and for the maintenance of normal septation
CLKPMBCM_00264 2e-59 yugI 5.3.1.9 J general stress protein
CLKPMBCM_00265 5e-176 yumC 1.18.1.2, 1.19.1.1, 1.8.1.9 C Ferredoxin--NADP reductase
CLKPMBCM_00266 2.7e-117 dedA S SNARE-like domain protein
CLKPMBCM_00267 1.8e-102 S Protein of unknown function (DUF1461)
CLKPMBCM_00268 3.7e-145 nagD 2.7.1.25, 3.1.3.41 G Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro
CLKPMBCM_00269 2.1e-94 yutD S Protein of unknown function (DUF1027)
CLKPMBCM_00270 1.6e-268 yunD 3.1.3.5 F Belongs to the 5'-nucleotidase family
CLKPMBCM_00271 1.3e-54
CLKPMBCM_00272 5.2e-267 ugpQ 3.1.4.46 C glycerophosphoryl diester phosphodiesterase
CLKPMBCM_00273 1.7e-273 pepV 3.5.1.18 E dipeptidase PepV
CLKPMBCM_00274 0.0 pbp1B 2.4.1.129, 3.4.16.4 GT51 M Penicillin binding protein transpeptidase domain
CLKPMBCM_00275 2.2e-174 ccpA K catabolite control protein A
CLKPMBCM_00276 5.5e-211 pepQ 3.4.13.9 E Creatinase/Prolidase N-terminal domain
CLKPMBCM_00277 2.8e-49
CLKPMBCM_00278 1.5e-10 WQ51_05790 S protein containing a divergent version of the methyl-accepting chemotaxis-like domain
CLKPMBCM_00279 1e-138 ykuT M mechanosensitive ion channel
CLKPMBCM_00280 1e-215 ackA 2.7.2.1 F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CLKPMBCM_00281 3.1e-38 L Helix-turn-helix domain
CLKPMBCM_00282 4.3e-47 L PFAM Integrase catalytic region
CLKPMBCM_00283 9.3e-115 rdgB 3.6.1.66, 5.1.1.3 F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
CLKPMBCM_00284 1.2e-143 murI 3.6.1.66, 5.1.1.3 M Provides the (R)-glutamate required for cell wall biosynthesis
CLKPMBCM_00285 5.6e-63 sip L Belongs to the 'phage' integrase family
CLKPMBCM_00286 3.8e-20 K Transcriptional
CLKPMBCM_00287 9.8e-13
CLKPMBCM_00294 2.3e-43 L Replication initiation factor
CLKPMBCM_00295 3.2e-68 yslB S Protein of unknown function (DUF2507)
CLKPMBCM_00296 1.1e-52 trxA O Belongs to the thioredoxin family
CLKPMBCM_00297 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
CLKPMBCM_00298 7.4e-92 cvpA S Colicin V production protein
CLKPMBCM_00299 2.1e-38 yrzB S Belongs to the UPF0473 family
CLKPMBCM_00300 3.4e-71 yqgF J Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
CLKPMBCM_00301 2.6e-42 yrzL S Belongs to the UPF0297 family
CLKPMBCM_00302 0.0 alaS 6.1.1.7 J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
CLKPMBCM_00303 4.5e-226 cshB 3.6.4.13 JKL DEAD-box RNA helicase. May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures
CLKPMBCM_00304 1.6e-182 nrnA 3.1.13.3, 3.1.3.7 S DHHA1 domain protein
CLKPMBCM_00305 2.7e-205 dinB 2.7.7.7 L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CLKPMBCM_00306 5.1e-281 zwf 1.1.1.363, 1.1.1.49 G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CLKPMBCM_00307 3.5e-39 yajC U Preprotein translocase
CLKPMBCM_00308 4.3e-186 ruvB 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing
CLKPMBCM_00309 9.3e-101 ruvA 3.6.4.12 L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB
CLKPMBCM_00310 0.0 mutL L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
CLKPMBCM_00311 0.0 mutS L that it carries out the mismatch recognition step. This protein has a weak ATPase activity
CLKPMBCM_00312 1.6e-76 EGP Major facilitator Superfamily
CLKPMBCM_00313 1.3e-60
CLKPMBCM_00314 0.0 nisT V ABC transporter
CLKPMBCM_00315 6.9e-31
CLKPMBCM_00316 8.1e-58
CLKPMBCM_00317 5.3e-295 groL O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions
CLKPMBCM_00318 8.8e-44 groS O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
CLKPMBCM_00320 3.8e-118 liaI S membrane
CLKPMBCM_00321 1.8e-78 XK27_02470 K LytTr DNA-binding domain
CLKPMBCM_00322 8e-43 ptcB 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
CLKPMBCM_00323 1.7e-102 yvdD 3.2.2.10 S Belongs to the LOG family
CLKPMBCM_00324 8.7e-116 rex K Modulates transcription in response to changes in cellular NADH NAD( ) redox state
CLKPMBCM_00325 8.2e-295 uup S ABC transporter, ATP-binding protein
CLKPMBCM_00326 5e-81
CLKPMBCM_00328 8.4e-148 K Helix-turn-helix XRE-family like proteins
CLKPMBCM_00329 5.7e-69 apfA 2.7.7.72, 3.6.1.61 F NUDIX domain
CLKPMBCM_00330 5.2e-136 L oxidized base lesion DNA N-glycosylase activity
CLKPMBCM_00331 2.9e-243 purB 4.3.2.2 F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CLKPMBCM_00332 1.6e-249 purA 6.3.4.4 F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
CLKPMBCM_00333 2.7e-188 guaC 1.1.1.205, 1.7.1.7 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
CLKPMBCM_00334 4.8e-111
CLKPMBCM_00335 2e-51
CLKPMBCM_00336 2.8e-172 D nuclear chromosome segregation
CLKPMBCM_00337 5.3e-195 tsaD 2.3.1.234 J Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
CLKPMBCM_00338 9.6e-95 rimI 2.3.1.128 K Ribosomal-protein-alanine acetyltransferase
CLKPMBCM_00339 3.1e-130 yeaZ 2.3.1.234 O Universal bacterial protein YeaZ
CLKPMBCM_00340 5.2e-79 folT S ECF transporter, substrate-specific component
CLKPMBCM_00341 1.1e-135 fat 3.1.2.21 I Acyl-ACP thioesterase
CLKPMBCM_00342 1.7e-154 rsmI 2.1.1.198 H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CLKPMBCM_00343 4.4e-58 yabA L Involved in initiation control of chromosome replication
CLKPMBCM_00344 1.4e-153 holB 2.7.7.7 L DNA polymerase III
CLKPMBCM_00345 3.2e-50 yaaQ S Cyclic-di-AMP receptor
CLKPMBCM_00346 3.1e-113 tmk 2.7.4.9 F Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CLKPMBCM_00347 9e-26 S Protein of unknown function (DUF2508)
CLKPMBCM_00348 2.4e-107 recR L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
CLKPMBCM_00349 5.9e-52 yaaK S Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
CLKPMBCM_00350 3.1e-288 dnaX 2.7.7.7 L DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CLKPMBCM_00351 1.7e-84 tadA 3.5.4.33 F Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2)
CLKPMBCM_00352 2.4e-30 S Protein conserved in bacteria
CLKPMBCM_00353 4.6e-58
CLKPMBCM_00354 3.6e-22
CLKPMBCM_00355 5.6e-112 rsmC 2.1.1.172 J Methyltransferase
CLKPMBCM_00356 1.5e-30
CLKPMBCM_00357 5.7e-126 potC 2.1.1.172, 2.1.1.80, 3.1.1.61 J Ion channel
CLKPMBCM_00358 9.4e-51 rplL J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation
CLKPMBCM_00359 4.2e-81 rplJ J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
CLKPMBCM_00360 9.3e-144 aatB ET ABC transporter substrate-binding protein
CLKPMBCM_00361 3.3e-115 glnQ 3.6.3.21 E ABC transporter
CLKPMBCM_00362 2.3e-108 glnP P ABC transporter permease
CLKPMBCM_00363 2.3e-207 L Putative transposase DNA-binding domain
CLKPMBCM_00364 3.6e-123 rplA J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release
CLKPMBCM_00365 5.3e-69 rplK J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
CLKPMBCM_00366 1.5e-100 nusG K Participates in transcription elongation, termination and antitermination
CLKPMBCM_00367 3.4e-11 secE U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation
CLKPMBCM_00368 1.8e-19 rpmG J Belongs to the bacterial ribosomal protein bL33 family
CLKPMBCM_00369 3.1e-187 hepT 2.5.1.30, 2.5.1.90 H Belongs to the FPP GGPP synthase family
CLKPMBCM_00370 6.9e-226 G Major Facilitator Superfamily
CLKPMBCM_00371 0.0 dxs 2.2.1.7 H Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
CLKPMBCM_00372 8.2e-282 gntK 2.7.1.12, 2.7.1.17 G Belongs to the FGGY kinase family
CLKPMBCM_00373 1.7e-34
CLKPMBCM_00374 5.1e-88 yvrI K sigma factor activity
CLKPMBCM_00375 2e-140 rlmB 2.1.1.185 J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CLKPMBCM_00376 1.3e-78 mrnC J Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
CLKPMBCM_00377 2.3e-270 cysS 6.1.1.16, 6.3.1.13 J Belongs to the class-I aminoacyl-tRNA synthetase family
CLKPMBCM_00378 8.4e-118 yibF S overlaps another CDS with the same product name
CLKPMBCM_00379 6.7e-153 I alpha/beta hydrolase fold
CLKPMBCM_00380 0.0 G Belongs to the glycosyl hydrolase 31 family
CLKPMBCM_00381 2.1e-126 XK27_08435 K UTRA
CLKPMBCM_00382 1.1e-212 agaS G SIS domain
CLKPMBCM_00383 2e-227 nagA 3.5.1.25 G Belongs to the metallo-dependent hydrolases superfamily. NagA family
CLKPMBCM_00384 2.5e-83 2.7.1.191 G PTS system sorbose subfamily IIB component
CLKPMBCM_00385 5.2e-130 XK27_08455 G PTS system sorbose-specific iic component
CLKPMBCM_00386 7.1e-147 manZ_1 G PTS system mannose/fructose/sorbose family IID component
CLKPMBCM_00387 3.9e-66 2.7.1.191 G PTS system fructose IIA component
CLKPMBCM_00388 4.8e-200 S zinc-ribbon domain
CLKPMBCM_00389 6.3e-87 ntd 2.4.2.6 F Nucleoside
CLKPMBCM_00390 1e-99 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CLKPMBCM_00391 2.9e-128 XK27_08440 K UTRA domain
CLKPMBCM_00392 7.5e-149 ptp3 3.1.3.48 T Tyrosine phosphatase family
CLKPMBCM_00393 1e-87 uspA T universal stress protein
CLKPMBCM_00395 8.3e-168 phnD P Phosphonate ABC transporter
CLKPMBCM_00396 1.4e-139 phnC 3.6.3.28 P Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
CLKPMBCM_00397 2.7e-130 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
CLKPMBCM_00398 9.2e-147 phnE 3.6.1.63 P Binding-protein-dependent transport system inner membrane component
CLKPMBCM_00399 7.3e-83
CLKPMBCM_00400 4.9e-273 S Calcineurin-like phosphoesterase
CLKPMBCM_00401 0.0 asnB 6.3.5.4 E Asparagine synthase
CLKPMBCM_00402 1.4e-264 yxbA 6.3.1.12 S ATP-grasp enzyme
CLKPMBCM_00403 0.0 nrdD 1.1.98.6 F Ribonucleoside-triphosphate reductase
CLKPMBCM_00404 9e-130 nrdG 1.97.1.4 O Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CLKPMBCM_00405 2.3e-102 S Iron-sulfur cluster assembly protein
CLKPMBCM_00406 3.5e-227 XK27_04775 S PAS domain
CLKPMBCM_00407 9.8e-225 yttB EGP Major facilitator Superfamily
CLKPMBCM_00408 8e-185 yihT 4.1.2.40, 4.1.2.57 G Belongs to the aldolase LacD family
CLKPMBCM_00409 7.4e-170 D nuclear chromosome segregation
CLKPMBCM_00410 7.6e-135 rpl K Helix-turn-helix domain, rpiR family
CLKPMBCM_00411 3.5e-166 pfkB 2.7.1.11, 2.7.1.56 H pfkB family carbohydrate kinase
CLKPMBCM_00412 0.0 fruA 2.7.1.200, 2.7.1.202 GT Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CLKPMBCM_00413 0.0 pepO 3.4.24.71 O Peptidase family M13
CLKPMBCM_00414 0.0 S Bacterial membrane protein, YfhO
CLKPMBCM_00415 0.0 pckA 4.1.1.49 H Phosphoenolpyruvate carboxykinase
CLKPMBCM_00416 0.0 kup P Transport of potassium into the cell
CLKPMBCM_00417 0.0 kup P Transport of potassium into the cell
CLKPMBCM_00418 5.6e-71
CLKPMBCM_00419 5.8e-109
CLKPMBCM_00420 1.5e-24
CLKPMBCM_00421 1.2e-33 S Protein of unknown function (DUF2922)
CLKPMBCM_00422 1.1e-199 NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
CLKPMBCM_00423 2.5e-208 lysA2 M Glycosyl hydrolases family 25
CLKPMBCM_00424 4e-142 fruK 2.7.1.11, 2.7.1.56 G pfkB family carbohydrate kinase
CLKPMBCM_00425 0.0 yjbQ P TrkA C-terminal domain protein
CLKPMBCM_00426 2.1e-174 S Oxidoreductase family, NAD-binding Rossmann fold
CLKPMBCM_00427 5.4e-136
CLKPMBCM_00428 2.6e-144
CLKPMBCM_00429 1.7e-72 S PAS domain
CLKPMBCM_00430 1.1e-132 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CLKPMBCM_00431 2.1e-14
CLKPMBCM_00432 2.1e-11
CLKPMBCM_00433 9.7e-42 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CLKPMBCM_00434 3.4e-71 2.4.1.83 GT2 S GtrA-like protein
CLKPMBCM_00435 2.6e-177 yfdH 2.4.2.53 GT2 M Glycosyltransferase, group 2 family protein
CLKPMBCM_00436 7.6e-100 lmrB EGP Major facilitator Superfamily
CLKPMBCM_00437 7.5e-32 lmrB EGP Major facilitator Superfamily
CLKPMBCM_00438 6.3e-115
CLKPMBCM_00439 6.6e-151 glcU U sugar transport
CLKPMBCM_00440 1.6e-168 yqhA G Aldose 1-epimerase
CLKPMBCM_00441 1.5e-192 brpA K Cell envelope-like function transcriptional attenuator common domain protein
CLKPMBCM_00442 5.6e-112 plsY 2.3.1.15 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
CLKPMBCM_00443 0.0 XK27_08315 M Sulfatase
CLKPMBCM_00444 1.2e-238 tyrS 6.1.1.1 J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
CLKPMBCM_00446 1.9e-250 pepC 3.4.22.40 E aminopeptidase
CLKPMBCM_00447 4.5e-193 oppA E ABC transporter, substratebinding protein
CLKPMBCM_00448 1.3e-125 oppB P ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLKPMBCM_00449 4.6e-151 oppC EP ABC-type dipeptide oligopeptide nickel transport systems, permease components
CLKPMBCM_00450 1.6e-172 oppD P Belongs to the ABC transporter superfamily
CLKPMBCM_00451 2.9e-136 oppF P Belongs to the ABC transporter superfamily
CLKPMBCM_00452 5.5e-118 ypgQ S Metal dependent phosphohydrolases with conserved 'HD' motif.
CLKPMBCM_00453 9.1e-253 pepC 3.4.22.40 E aminopeptidase
CLKPMBCM_00454 1.2e-32
CLKPMBCM_00455 4.1e-75 greA K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides
CLKPMBCM_00456 1.6e-76 hsp O Belongs to the small heat shock protein (HSP20) family
CLKPMBCM_00457 2.2e-292 celA 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
CLKPMBCM_00458 1e-85
CLKPMBCM_00459 2.8e-241 celD 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CLKPMBCM_00460 3.5e-126 yydK K UTRA
CLKPMBCM_00461 1.2e-59 S Domain of unknown function (DUF3284)
CLKPMBCM_00462 8.6e-300 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
CLKPMBCM_00463 2e-132 gmuR K UTRA
CLKPMBCM_00464 8.5e-51 chbA 2.7.1.196, 2.7.1.205 G PTS system, Lactose Cellobiose specific IIA subunit
CLKPMBCM_00465 5.8e-52 ptcB 2.7.1.196, 2.7.1.205 G PTS system, Lactose/Cellobiose specific IIB subunit
CLKPMBCM_00466 3e-190 pts23C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CLKPMBCM_00467 0.0 oppA E ABC transporter substrate-binding protein
CLKPMBCM_00468 7.4e-19 oppA E ABC transporter substrate-binding protein
CLKPMBCM_00469 5.7e-186 oppA E ABC transporter substrate-binding protein
CLKPMBCM_00470 6.8e-89 oppA E ABC transporter substrate-binding protein
CLKPMBCM_00471 7.8e-123 rnc 3.1.26.3 J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism
CLKPMBCM_00472 0.0 smc D Required for chromosome condensation and partitioning
CLKPMBCM_00473 5e-166 ftsY U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC)
CLKPMBCM_00474 2e-285 pipD E Dipeptidase
CLKPMBCM_00475 4.9e-57 ylxM S Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
CLKPMBCM_00476 1.4e-227 ffh 3.6.5.4 U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CLKPMBCM_00477 6.4e-44 rpsP J Belongs to the bacterial ribosomal protein bS16 family
CLKPMBCM_00478 3.1e-95 rimM J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
CLKPMBCM_00479 2.5e-135 trmD 2.1.1.228, 4.6.1.12 J Belongs to the RNA methyltransferase TrmD family
CLKPMBCM_00480 1e-57 rplS J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
CLKPMBCM_00481 2.3e-116 lepB 3.4.21.89 U Belongs to the peptidase S26 family
CLKPMBCM_00482 3.9e-72 apfA 2.7.7.72, 3.6.1.61 F Nudix hydrolase
CLKPMBCM_00483 3.9e-116 ung2 3.2.2.27 L Uracil-DNA glycosylase
CLKPMBCM_00484 1e-113 lexA 3.4.21.88 K Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CLKPMBCM_00485 9.4e-34 ynzC S UPF0291 protein
CLKPMBCM_00486 1.9e-30 yneF S Uncharacterised protein family (UPF0154)
CLKPMBCM_00487 0.0 mdlA V ABC transporter
CLKPMBCM_00488 3e-283 mdlB V ABC transporter
CLKPMBCM_00489 2.5e-228 cfa 2.1.1.317, 2.1.1.79 M cyclopropane-fatty-acyl-phospholipid synthase
CLKPMBCM_00490 5.8e-117 plsC 2.3.1.51 I Acyltransferase
CLKPMBCM_00491 1.1e-192 yabB 2.1.1.223 L Methyltransferase small domain
CLKPMBCM_00492 5.8e-138 rpsB J Belongs to the universal ribosomal protein uS2 family
CLKPMBCM_00493 9.1e-184 tsf J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
CLKPMBCM_00494 2.4e-130 pyrH 2.7.4.22 F Catalyzes the reversible phosphorylation of UMP to UDP
CLKPMBCM_00495 2.6e-92 frr J Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another
CLKPMBCM_00496 8.5e-136 uppS 2.5.1.31 H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CLKPMBCM_00497 4.5e-138 cdsA 2.7.7.41 S Belongs to the CDS family
CLKPMBCM_00498 2.5e-228 rseP 3.4.21.107, 3.4.21.116 M zinc metalloprotease
CLKPMBCM_00499 0.0 proS 6.1.1.15 J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS
CLKPMBCM_00500 0.0 polC 2.7.7.7 L Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CLKPMBCM_00501 8e-82 rimP J Required for maturation of 30S ribosomal subunits
CLKPMBCM_00502 7.5e-214 nusA K Participates in both transcription termination and antitermination
CLKPMBCM_00503 1.5e-46 ylxR K Protein of unknown function (DUF448)
CLKPMBCM_00504 7.1e-47 rplGA J ribosomal protein
CLKPMBCM_00505 0.0 infB J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
CLKPMBCM_00506 3.5e-61 rbfA J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
CLKPMBCM_00507 3.4e-166 truB 5.4.99.25 J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
CLKPMBCM_00508 7.8e-174 ribF 2.7.1.26, 2.7.7.2 H Belongs to the ribF family
CLKPMBCM_00509 1.8e-273 lsa S ABC transporter
CLKPMBCM_00510 3.4e-39 S GyrI-like small molecule binding domain
CLKPMBCM_00511 7.4e-51 S GyrI-like small molecule binding domain
CLKPMBCM_00514 2.3e-29
CLKPMBCM_00517 2.4e-07
CLKPMBCM_00519 3.3e-10 S Helix-turn-helix domain
CLKPMBCM_00520 8.9e-19 K Transcriptional regulator
CLKPMBCM_00521 5.6e-113 sip L Belongs to the 'phage' integrase family
CLKPMBCM_00522 4.2e-192 hrcA K Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons
CLKPMBCM_00523 8.5e-78 grpE O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
CLKPMBCM_00524 0.0 dnaK O Heat shock 70 kDa protein
CLKPMBCM_00525 3.7e-173 dnaJ O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins
CLKPMBCM_00526 0.0 lepA M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner
CLKPMBCM_00527 4.6e-123 srtA 3.4.22.70 M sortase family
CLKPMBCM_00528 0.0 recJ L Single-stranded-DNA-specific exonuclease RecJ
CLKPMBCM_00529 3.1e-95 apt 2.4.2.22, 2.4.2.7 F Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
CLKPMBCM_00530 9.7e-275 yjeM E Amino Acid
CLKPMBCM_00531 2.3e-281 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CLKPMBCM_00532 2.1e-182 thyA 2.1.1.45 F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
CLKPMBCM_00533 4.5e-91 folA 1.5.1.3 H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CLKPMBCM_00534 1.6e-249 G Major Facilitator
CLKPMBCM_00535 0.0 mgtA 3.6.3.2, 3.6.3.6 P Cation transporter/ATPase, N-terminus
CLKPMBCM_00536 9e-153 lysR5 K LysR substrate binding domain
CLKPMBCM_00538 5e-102 3.6.1.27 I Acid phosphatase homologues
CLKPMBCM_00539 6.2e-246 eno 4.2.1.11 G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis
CLKPMBCM_00540 8.2e-18 S Sugar efflux transporter for intercellular exchange
CLKPMBCM_00541 8.7e-306 ybiT S ABC transporter, ATP-binding protein
CLKPMBCM_00542 3.4e-188 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
CLKPMBCM_00543 6.2e-22 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
CLKPMBCM_00544 4.3e-92 S PAS domain
CLKPMBCM_00545 1.5e-143 pnuC H nicotinamide mononucleotide transporter
CLKPMBCM_00546 8.3e-42 mscL M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell
CLKPMBCM_00547 9e-133 S PAS domain
CLKPMBCM_00548 1.2e-234 ydjN U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family
CLKPMBCM_00549 3.2e-158 yxjG 2.1.1.14 E methionine synthase, vitamin-B12 independent
CLKPMBCM_00550 3.3e-46 luxS 4.4.1.21 H Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5- dihydroxy-2,3-pentadione (DPD)
CLKPMBCM_00551 2.4e-60
CLKPMBCM_00552 2.2e-145 G PTS system mannose/fructose/sorbose family IID component
CLKPMBCM_00553 2.7e-138 G PTS system sorbose-specific iic component
CLKPMBCM_00554 5.2e-162 2.7.1.191 G PTS system sorbose subfamily IIB component
CLKPMBCM_00555 0.0 oppA E ABC transporter substrate-binding protein
CLKPMBCM_00556 2.5e-153 EG EamA-like transporter family
CLKPMBCM_00557 1.8e-270 3.2.1.86 GT1 G Belongs to the glycosyl hydrolase 1 family
CLKPMBCM_00558 1.3e-181 bglP 2.7.1.211 G phosphotransferase system
CLKPMBCM_00559 5e-122 licT K CAT RNA binding domain
CLKPMBCM_00560 8.3e-102 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CLKPMBCM_00561 1.9e-163 coaA 2.7.1.33 F Pantothenic acid kinase
CLKPMBCM_00562 2.3e-104 E GDSL-like Lipase/Acylhydrolase
CLKPMBCM_00563 3.5e-121 yvpB S Peptidase_C39 like family
CLKPMBCM_00564 0.0 helD 3.6.4.12 L DNA helicase
CLKPMBCM_00565 1.3e-111 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
CLKPMBCM_00567 0.0 3.6.3.8 P ATPase, P-type (transporting), HAD superfamily, subfamily IC
CLKPMBCM_00568 5.8e-141 rpiR1 K Helix-turn-helix domain, rpiR family
CLKPMBCM_00569 3.1e-127 nanE 5.1.3.9 G Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P)
CLKPMBCM_00570 1.3e-49 ptsG 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
CLKPMBCM_00571 2.5e-25 ptsG 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system, EIIB
CLKPMBCM_00572 3.6e-52
CLKPMBCM_00573 2.8e-26
CLKPMBCM_00574 1.4e-124 pgm3 G Phosphoglycerate mutase family
CLKPMBCM_00575 3.5e-306 V FtsX-like permease family
CLKPMBCM_00576 6.3e-134 cysA V ABC transporter, ATP-binding protein
CLKPMBCM_00577 6.9e-278 E amino acid
CLKPMBCM_00578 7.7e-121 V ABC-2 type transporter
CLKPMBCM_00579 4.2e-122 V Transport permease protein
CLKPMBCM_00580 7e-136 V ABC transporter
CLKPMBCM_00581 1.3e-74
CLKPMBCM_00583 5.2e-229 hflX S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CLKPMBCM_00584 1.6e-227 S Putative peptidoglycan binding domain
CLKPMBCM_00585 1.2e-108 M NlpC P60 family protein
CLKPMBCM_00586 1.4e-98 gmk2 2.7.4.8 F Guanylate kinase
CLKPMBCM_00587 5.3e-44
CLKPMBCM_00588 2.3e-260 S O-antigen ligase like membrane protein
CLKPMBCM_00589 4.5e-109
CLKPMBCM_00590 2.5e-80 nrdI F Belongs to the NrdI family
CLKPMBCM_00591 5.1e-173 nrdF 1.17.4.1 F Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CLKPMBCM_00592 2.6e-80
CLKPMBCM_00593 8.3e-57 T PemK-like, MazF-like toxin of type II toxin-antitoxin system
CLKPMBCM_00594 1.1e-37
CLKPMBCM_00595 3.1e-78 S Threonine/Serine exporter, ThrE
CLKPMBCM_00596 7.8e-135 thrE S Putative threonine/serine exporter
CLKPMBCM_00597 1.7e-282 S ABC transporter
CLKPMBCM_00598 1.4e-60
CLKPMBCM_00599 1.5e-37
CLKPMBCM_00600 1.9e-206 brpA K Cell envelope-like function transcriptional attenuator common domain protein
CLKPMBCM_00601 0.0 pepF E oligoendopeptidase F
CLKPMBCM_00602 4.1e-257 lctP C L-lactate permease
CLKPMBCM_00603 1.9e-133 znuB U ABC 3 transport family
CLKPMBCM_00604 2.4e-116 fhuC P ABC transporter
CLKPMBCM_00605 3.5e-155 psaA P Belongs to the bacterial solute-binding protein 9 family
CLKPMBCM_00606 4.1e-23 K helix_turn_helix, Arsenical Resistance Operon Repressor
CLKPMBCM_00607 4.5e-47 ropB K Transcriptional regulator
CLKPMBCM_00608 1.4e-116 pcp 3.4.19.3 O Removes 5-oxoproline from various penultimate amino acid residues except L-proline
CLKPMBCM_00609 9.5e-156 S Protein of unknown function (DUF979)
CLKPMBCM_00610 1.2e-112 S Protein of unknown function (DUF969)
CLKPMBCM_00611 1.6e-82 S Protein of unknown function (DUF805)
CLKPMBCM_00612 5.5e-11
CLKPMBCM_00613 3.4e-13
CLKPMBCM_00614 7.9e-266 G PTS system Galactitol-specific IIC component
CLKPMBCM_00615 1.8e-92 S Protein of unknown function (DUF1440)
CLKPMBCM_00616 3.6e-101 S CAAX protease self-immunity
CLKPMBCM_00617 1.3e-199 S DUF218 domain
CLKPMBCM_00618 0.0 macB_3 V ABC transporter, ATP-binding protein
CLKPMBCM_00619 7.3e-269 cydA 1.10.3.14 C ubiquinol oxidase
CLKPMBCM_00620 2.1e-180 cydB 1.10.3.14 C Cytochrome d ubiquinol oxidase subunit II
CLKPMBCM_00621 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydD
CLKPMBCM_00622 0.0 cydD CO ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CLKPMBCM_00623 3.7e-176 2.5.1.74 H 1,4-dihydroxy-2-naphthoate
CLKPMBCM_00624 4.1e-167 phnD P ABC transporter, phosphonate, periplasmic substrate-binding protein
CLKPMBCM_00625 8.6e-193 tcsA S ABC transporter substrate-binding protein PnrA-like
CLKPMBCM_00626 2.7e-151 blaA6 V Beta-lactamase
CLKPMBCM_00627 3.3e-235 pts29C 2.7.1.207 G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CLKPMBCM_00628 1.3e-117 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
CLKPMBCM_00629 1.4e-195 S Bacterial protein of unknown function (DUF871)
CLKPMBCM_00630 6e-103 S Putative esterase
CLKPMBCM_00631 2e-162 ykfB 5.1.1.20 M Belongs to the mandelate racemase muconate lactonizing enzyme family
CLKPMBCM_00632 2e-95 3.5.2.6 V Beta-lactamase enzyme family
CLKPMBCM_00633 1.8e-127 murQ 4.2.1.126 G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
CLKPMBCM_00634 3.1e-128 S membrane transporter protein
CLKPMBCM_00635 8.3e-159 yeaE S Aldo/keto reductase family
CLKPMBCM_00636 5.1e-133 nagB 3.1.1.31, 3.5.99.6 G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion
CLKPMBCM_00637 2.5e-118 dak 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
CLKPMBCM_00638 2.4e-124 dgk 2.7.1.74, 2.7.1.76 F deoxynucleoside kinase
CLKPMBCM_00639 1.7e-237 lctO C L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases
CLKPMBCM_00640 3e-232 pbuG S permease
CLKPMBCM_00641 4.8e-126 K helix_turn_helix, mercury resistance
CLKPMBCM_00642 1.5e-231 pbuG S permease
CLKPMBCM_00643 4.9e-45 I bis(5'-adenosyl)-triphosphatase activity
CLKPMBCM_00644 6.8e-227 pbuG S permease
CLKPMBCM_00645 3.1e-16 K Bacteriophage CI repressor helix-turn-helix domain
CLKPMBCM_00646 1.3e-41 K Bacteriophage CI repressor helix-turn-helix domain
CLKPMBCM_00647 2.6e-68 def 3.5.1.31, 3.5.1.88 J Removes the formyl group from the N-terminal Met of newly synthesized proteins
CLKPMBCM_00648 7.7e-73
CLKPMBCM_00649 1e-88
CLKPMBCM_00650 1.1e-72 atkY K Penicillinase repressor
CLKPMBCM_00651 7.8e-64 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
CLKPMBCM_00652 4.1e-49 silP 1.9.3.1, 3.6.3.54 S Cupredoxin-like domain
CLKPMBCM_00653 0.0 copA 3.6.3.54 P P-type ATPase
CLKPMBCM_00654 3.4e-277 E Amino acid permease
CLKPMBCM_00655 0.0 yaaO 4.1.1.17, 4.1.1.19 E Orn/Lys/Arg decarboxylase, C-terminal domain
CLKPMBCM_00656 3.2e-247 ynbB 4.4.1.1 P aluminum resistance
CLKPMBCM_00657 3.3e-66 K Acetyltransferase (GNAT) domain
CLKPMBCM_00658 5.7e-226 EGP Sugar (and other) transporter
CLKPMBCM_00659 9.7e-65 S Iron-sulphur cluster biosynthesis
CLKPMBCM_00660 0.0 mutS2 L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity
CLKPMBCM_00661 1.6e-264 clcA P chloride
CLKPMBCM_00662 5.6e-269 gnd 1.1.1.343, 1.1.1.44 H Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
CLKPMBCM_00663 0.0 poxB 1.2.3.3, 1.2.5.1 EH Belongs to the TPP enzyme family
CLKPMBCM_00664 3e-45 3.6.1.55 F NUDIX domain
CLKPMBCM_00665 2.3e-115 2.4.2.3 F Phosphorylase superfamily
CLKPMBCM_00666 3.2e-136 2.4.2.3 F Phosphorylase superfamily
CLKPMBCM_00667 5.3e-72 6.3.3.2 S ASCH
CLKPMBCM_00668 3.9e-78 5.4.2.11 G Phosphoglycerate mutase family
CLKPMBCM_00669 5.5e-150 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CLKPMBCM_00670 2.8e-64 rbsD 5.4.99.62 G Catalyzes the interconversion of beta-pyran and beta- furan forms of D-ribose
CLKPMBCM_00671 6.1e-144 rbsU U ribose uptake protein RbsU
CLKPMBCM_00672 2.2e-148 aacC 2.3.1.81 V Aminoglycoside 3-N-acetyltransferase
CLKPMBCM_00673 1.6e-203 G Transmembrane secretion effector
CLKPMBCM_00674 3.3e-101 V ABC-type multidrug transport system, ATPase and permease components
CLKPMBCM_00675 6.1e-169 V ABC-type multidrug transport system, ATPase and permease components
CLKPMBCM_00676 2.3e-274 V ABC-type multidrug transport system, ATPase and permease components
CLKPMBCM_00677 1.4e-184 fni 1.1.1.88, 5.3.3.2 C Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP)
CLKPMBCM_00678 2.5e-200 mvaK2 2.7.1.36, 2.7.1.43, 2.7.4.2 I phosphomevalonate kinase
CLKPMBCM_00679 1.4e-173 mvaD 4.1.1.33 I diphosphomevalonate decarboxylase
CLKPMBCM_00680 1.4e-164 mvk 1.1.1.88, 2.3.3.10, 2.7.1.36 I GHMP kinases N terminal domain
CLKPMBCM_00681 0.0 rexB 3.1.21.3, 3.6.4.12 L The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. This subunit has 5' - 3' nuclease activity
CLKPMBCM_00682 0.0 addA 3.6.4.12 L ATP-dependent helicase nuclease subunit A
CLKPMBCM_00683 0.0 dinG 2.7.7.7, 3.6.4.12 L helicase involved in DNA repair and perhaps also replication
CLKPMBCM_00684 5.9e-88 ypmB S Protein conserved in bacteria
CLKPMBCM_00685 3.2e-258 asnS 6.1.1.22 J Asparaginyl-tRNA synthetase
CLKPMBCM_00686 2e-112 dnaD L DnaD domain protein
CLKPMBCM_00687 3.6e-114 nth 4.2.99.18 L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CLKPMBCM_00688 0.0 ponA 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein 1A
CLKPMBCM_00689 8.6e-113 recU L Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation
CLKPMBCM_00690 5.1e-104 ypsA S Belongs to the UPF0398 family
CLKPMBCM_00691 4.9e-70 gpsB D Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation
CLKPMBCM_00692 1.1e-214 rlmL 2.1.1.173, 2.1.1.264 L Belongs to the methyltransferase superfamily
CLKPMBCM_00693 3.7e-240 cpdA S Calcineurin-like phosphoesterase
CLKPMBCM_00694 2.4e-214 I transferase activity, transferring acyl groups other than amino-acyl groups
CLKPMBCM_00695 1.3e-173 degV S DegV family
CLKPMBCM_00696 1.6e-55
CLKPMBCM_00697 0.0 fhs 6.3.4.3 F Belongs to the formate--tetrahydrofolate ligase family
CLKPMBCM_00698 1.4e-75 lspA 3.4.23.36 MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins
CLKPMBCM_00699 7.4e-169 rluD 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
CLKPMBCM_00700 4.5e-194 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
CLKPMBCM_00701 0.0 carB1 6.3.5.5 F Carbamoyl-phosphate synthase
CLKPMBCM_00702 0.0 FbpA K Fibronectin-binding protein
CLKPMBCM_00703 9.3e-63
CLKPMBCM_00704 2.2e-162 degV S EDD domain protein, DegV family
CLKPMBCM_00705 1.8e-148
CLKPMBCM_00706 9.7e-66 K Transcriptional regulator
CLKPMBCM_00707 2.8e-10 K Transcriptional regulator
CLKPMBCM_00708 2.9e-201 xerS L Belongs to the 'phage' integrase family
CLKPMBCM_00709 8.8e-122 yoaK S Protein of unknown function (DUF1275)
CLKPMBCM_00710 1.3e-110 ppiB 5.2.1.8 G PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CLKPMBCM_00711 0.0 recQ 3.6.4.12 L ATP-dependent DNA helicase RecQ
CLKPMBCM_00712 2.8e-171 ppaC 3.6.1.1 C inorganic pyrophosphatase
CLKPMBCM_00713 1.8e-80 K Transcriptional regulator
CLKPMBCM_00715 1.2e-242 cycA E Amino acid permease
CLKPMBCM_00716 0.0 adhE 1.1.1.1, 1.2.1.10 C belongs to the iron- containing alcohol dehydrogenase family
CLKPMBCM_00717 3.4e-68
CLKPMBCM_00718 5.8e-105 4.1.1.44 S Carboxymuconolactone decarboxylase family
CLKPMBCM_00719 0.0 S TerB-C domain
CLKPMBCM_00720 3.9e-251 P P-loop Domain of unknown function (DUF2791)
CLKPMBCM_00721 0.0 lhr L DEAD DEAH box helicase
CLKPMBCM_00722 1.7e-190 galE 5.1.3.2 M Belongs to the NAD(P)-dependent epimerase dehydratase family
CLKPMBCM_00723 2.5e-77 S Uncharacterized protein conserved in bacteria (DUF2263)
CLKPMBCM_00724 6e-58 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
CLKPMBCM_00725 3.7e-55 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
CLKPMBCM_00726 8.6e-81 merA 1.16.1.1, 1.8.1.7 C Pyridine nucleotide-disulfide oxidoreductase
CLKPMBCM_00727 1.4e-161 yvgN C Aldo keto reductase
CLKPMBCM_00729 5.6e-89 K acetyltransferase
CLKPMBCM_00730 6.4e-56 psiE S Phosphate-starvation-inducible E
CLKPMBCM_00731 1.1e-85 M LysM domain protein
CLKPMBCM_00732 3e-77 M LysM domain protein
CLKPMBCM_00734 2.3e-19 yjgN S Bacterial protein of unknown function (DUF898)
CLKPMBCM_00735 4.7e-169 XK27_10475 S Oxidoreductase family, NAD-binding Rossmann fold
CLKPMBCM_00736 8.6e-58 rpiA 5.3.1.6 G Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
CLKPMBCM_00737 1e-111 K SIS domain
CLKPMBCM_00738 8.4e-165 ldh 1.1.1.27 C lactate/malate dehydrogenase, alpha/beta C-terminal domain
CLKPMBCM_00741 4.6e-51 P Rhodanese Homology Domain
CLKPMBCM_00742 3.8e-183
CLKPMBCM_00743 3.6e-123 gntR1 K UTRA
CLKPMBCM_00744 7.4e-70 tagD 2.7.7.15, 2.7.7.39 IM Glycerol-3-phosphate cytidylyltransferase
CLKPMBCM_00745 1.9e-130 tagA 2.4.1.187 GT26 F Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid
CLKPMBCM_00746 6.2e-202 csaB M Glycosyl transferases group 1
CLKPMBCM_00747 0.0 S Glycosyltransferase like family 2
CLKPMBCM_00748 3e-281 pncB 6.3.4.21 F Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
CLKPMBCM_00749 2.3e-153 nadE 6.3.1.5 F Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source
CLKPMBCM_00750 1.3e-295 spoVK O ATPase family associated with various cellular activities (AAA)
CLKPMBCM_00751 0.0 pacL 3.6.3.8 P P-type ATPase
CLKPMBCM_00752 5e-223 M CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase
CLKPMBCM_00753 6.9e-254 epsU S Polysaccharide biosynthesis protein
CLKPMBCM_00754 8.6e-133 M Glycosyltransferase sugar-binding region containing DXD motif
CLKPMBCM_00755 4.5e-74 ydcK S Belongs to the SprT family
CLKPMBCM_00757 3.1e-102 S ECF transporter, substrate-specific component
CLKPMBCM_00758 7e-110 acmC 3.2.1.17, 3.2.1.96 NU mannosyl-glycoprotein
CLKPMBCM_00759 0.0 pcrA 3.6.4.12 L ATP-dependent DNA helicase
CLKPMBCM_00760 0.0 ligA 6.5.1.2 L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
CLKPMBCM_00761 2.2e-207 camS S sex pheromone
CLKPMBCM_00762 3.3e-49 gatC 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CLKPMBCM_00763 2.4e-270 gatA 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln)
CLKPMBCM_00764 6e-274 gatB 6.1.1.12, 6.3.5.6, 6.3.5.7 J Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
CLKPMBCM_00765 1.3e-165 yegS 2.7.1.107 G Lipid kinase
CLKPMBCM_00767 3.4e-149 S hydrolase
CLKPMBCM_00768 1.7e-154 ypbG 2.7.1.2 GK ROK family
CLKPMBCM_00769 6.9e-116
CLKPMBCM_00771 8.6e-113 E Belongs to the SOS response-associated peptidase family
CLKPMBCM_00772 2e-194 trpS 6.1.1.2 J Belongs to the class-I aminoacyl-tRNA synthetase family
CLKPMBCM_00773 4.3e-91 comEB 3.5.4.12 F MafB19-like deaminase
CLKPMBCM_00774 2.8e-97 S TPM domain
CLKPMBCM_00775 4.4e-178 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
CLKPMBCM_00776 0.0 metG 6.1.1.10 J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
CLKPMBCM_00777 1.5e-146 tatD L hydrolase, TatD family
CLKPMBCM_00778 1.6e-97 rnmV 3.1.26.8 J Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
CLKPMBCM_00779 6.8e-159 ksgA 2.1.1.182 J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits
CLKPMBCM_00780 4.8e-35 veg S Biofilm formation stimulator VEG
CLKPMBCM_00781 1.1e-150 purR 2.4.2.22, 2.4.2.7 F pur operon repressor
CLKPMBCM_00782 4.5e-218 glmU 2.3.1.157, 2.7.7.23 M Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
CLKPMBCM_00783 1.1e-173 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CLKPMBCM_00784 3.7e-171 yvdE K helix_turn _helix lactose operon repressor
CLKPMBCM_00785 0.0 malL 3.2.1.10, 3.2.1.20 GH13,GH31 G Alpha amylase, catalytic domain
CLKPMBCM_00786 0.0 nplT 3.2.1.133, 3.2.1.135, 3.2.1.54 GH13 G Belongs to the glycosyl hydrolase 13 family
CLKPMBCM_00787 0.0 map2 2.4.1.8 GH65 G hydrolase, family 65, central catalytic
CLKPMBCM_00788 2.6e-115 pgmB 2.4.1.64, 3.1.3.12, 3.2.1.28, 5.4.2.6 GH37,GH65 S beta-phosphoglucomutase
CLKPMBCM_00789 1e-209 msmX P Belongs to the ABC transporter superfamily
CLKPMBCM_00790 2.9e-213 malE G Bacterial extracellular solute-binding protein
CLKPMBCM_00791 3.6e-252 malF P Binding-protein-dependent transport system inner membrane component
CLKPMBCM_00792 4.1e-153 malG P ABC transporter permease
CLKPMBCM_00793 0.0 dexB 3.2.1.10, 3.2.1.70 GH13 G Alpha amylase, catalytic domain protein
CLKPMBCM_00794 1.3e-265 ywfO S Metal dependent phosphohydrolases with conserved 'HD' motif.
CLKPMBCM_00795 6.2e-73 S Domain of unknown function (DUF1934)
CLKPMBCM_00796 5.5e-63 rpoE K Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling
CLKPMBCM_00797 0.0 pyrG 6.3.4.2 F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates
CLKPMBCM_00798 5.5e-239 murA 2.5.1.7 M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
CLKPMBCM_00799 6.6e-235 pbuX F xanthine permease
CLKPMBCM_00800 7.6e-103 xpt 2.4.2.22, 2.4.2.7 F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis
CLKPMBCM_00801 5.8e-104 K DNA-binding helix-turn-helix protein
CLKPMBCM_00802 2.5e-302 guaA 2.3.1.128, 6.3.5.2 F Catalyzes the synthesis of GMP from XMP
CLKPMBCM_00803 1.5e-07
CLKPMBCM_00804 2e-104 K transcriptional regulator
CLKPMBCM_00805 3.3e-94 yxkA S Phosphatidylethanolamine-binding protein
CLKPMBCM_00806 1.9e-44 ywhK S Membrane
CLKPMBCM_00807 8.3e-131 ywhK S Membrane
CLKPMBCM_00808 2.1e-85 XK27_09675 K Acetyltransferase (GNAT) domain
CLKPMBCM_00809 2e-17 S B3 4 domain
CLKPMBCM_00810 5.6e-63 S B3 4 domain
CLKPMBCM_00811 5.6e-13 lmrB P Belongs to the major facilitator superfamily
CLKPMBCM_00812 1.5e-41 lmrB P Belongs to the major facilitator superfamily
CLKPMBCM_00813 7.1e-118 lmrB P Belongs to the major facilitator superfamily
CLKPMBCM_00814 1.5e-72 ogt 2.1.1.63 L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CLKPMBCM_00815 5.4e-68 adk 2.7.4.3 F adenylate kinase activity
CLKPMBCM_00816 6.2e-88
CLKPMBCM_00817 1.4e-35
CLKPMBCM_00819 1.2e-47 S Putative adhesin
CLKPMBCM_00820 9.6e-40 M Glycosyl transferases group 1
CLKPMBCM_00821 0.0 ppc 4.1.1.31 H Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
CLKPMBCM_00822 2.5e-103 pncA Q Isochorismatase family
CLKPMBCM_00823 1.8e-90 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CLKPMBCM_00824 0.0 carB 6.3.5.5 F Carbamoyl-phosphate synthase
CLKPMBCM_00825 4.8e-207 carA 6.3.5.5 F Carbamoyl-phosphate synthetase glutamine chain
CLKPMBCM_00826 9.2e-234 pyrC 3.5.2.3 F Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily
CLKPMBCM_00827 4e-181 pyrB 2.1.3.2 F Belongs to the ATCase OTCase family
CLKPMBCM_00828 8.7e-93 pyrR 2.4.2.9 F Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
CLKPMBCM_00829 2.4e-167 pyrD 1.3.1.14, 1.3.98.1 F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily
CLKPMBCM_00830 1.7e-125 pyrF 4.1.1.23 F Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP)
CLKPMBCM_00831 1e-116 pyrE 2.4.2.10, 4.1.1.23 F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
CLKPMBCM_00832 2.1e-296 I Protein of unknown function (DUF2974)
CLKPMBCM_00833 5.6e-144 yxeH S hydrolase
CLKPMBCM_00834 3e-166 XK27_05540 S DUF218 domain
CLKPMBCM_00835 3.2e-50 ybjQ S Belongs to the UPF0145 family
CLKPMBCM_00836 5.1e-262 rsmF 2.1.1.176 J NOL1 NOP2 sun family protein
CLKPMBCM_00837 6.9e-173
CLKPMBCM_00838 6.2e-126
CLKPMBCM_00839 2.7e-100 lepB 3.4.21.89 U Belongs to the peptidase S26 family
CLKPMBCM_00840 1.4e-21
CLKPMBCM_00841 1e-132
CLKPMBCM_00842 1.2e-141
CLKPMBCM_00843 6.9e-122 skfE V ATPases associated with a variety of cellular activities
CLKPMBCM_00844 2.4e-57 yvoA_1 K Transcriptional regulator, GntR family
CLKPMBCM_00845 4.6e-246 pepT 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
CLKPMBCM_00846 3.3e-149 yqfO 3.5.4.16 S Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CLKPMBCM_00847 3.5e-115 trmK 2.1.1.217 S SAM-dependent methyltransferase
CLKPMBCM_00848 2.7e-136 cjaA ET ABC transporter substrate-binding protein
CLKPMBCM_00849 5.9e-132 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
CLKPMBCM_00850 1.3e-106 P ABC transporter permease
CLKPMBCM_00851 2.9e-114 papP P ABC transporter, permease protein
CLKPMBCM_00852 6.4e-199 sigA K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth
CLKPMBCM_00853 0.0 dnaG L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
CLKPMBCM_00854 0.0 glyS 6.1.1.14 J Glycyl-tRNA synthetase beta subunit
CLKPMBCM_00855 2.7e-179 glyQ 6.1.1.14 J glycyl-tRNA synthetase alpha subunit
CLKPMBCM_00856 4.4e-135 recO L Involved in DNA repair and RecF pathway recombination
CLKPMBCM_00857 4.8e-168 era S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
CLKPMBCM_00858 5.7e-81 ybeY 2.6.99.2, 3.5.4.5 S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
CLKPMBCM_00859 2e-172 phoH T phosphate starvation-inducible protein PhoH
CLKPMBCM_00860 3.7e-33 yqeY S YqeY-like protein
CLKPMBCM_00861 1.5e-22 rpsU J Belongs to the bacterial ribosomal protein bS21 family
CLKPMBCM_00862 2.8e-154 yqfL 2.7.11.33, 2.7.4.28 F Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
CLKPMBCM_00863 4.9e-51 S Iron-sulfur cluster assembly protein
CLKPMBCM_00864 2.3e-151 sdaAA 4.3.1.17 E L-serine dehydratase, iron-sulfur-dependent, alpha subunit
CLKPMBCM_00865 2.1e-120 sdaAB 4.3.1.17 E Serine dehydratase beta chain
CLKPMBCM_00866 4.5e-155 yitT S Uncharacterised 5xTM membrane BCR, YitT family COG1284
CLKPMBCM_00867 1.6e-85 msrA 1.8.4.11, 1.8.4.12 O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
CLKPMBCM_00868 1.7e-17
CLKPMBCM_00869 1.5e-229 S Phage tail sheath protein
CLKPMBCM_00870 1.1e-83 S Protein of unknown function (DUF2001)
CLKPMBCM_00871 9.8e-68 S Pfam:Phage_TAC_5
CLKPMBCM_00872 1.1e-198 S transmembrane transport
CLKPMBCM_00873 1.3e-109 ygaU GH23 S protein containing LysM domain
CLKPMBCM_00874 2.1e-196 S N-acetylmuramoyl-L-alanine amidase activity
CLKPMBCM_00875 1.2e-58 S Protein of unknown function (DUF2577)
CLKPMBCM_00876 9.7e-59 S Protein of unknown function (DUF2634)
CLKPMBCM_00877 1.2e-205 S Baseplate J-like protein
CLKPMBCM_00878 5.9e-92 S Uncharacterized protein conserved in bacteria (DUF2313)
CLKPMBCM_00879 0.0 S N-acetylmuramoyl-L-alanine amidase activity
CLKPMBCM_00880 4.7e-80
CLKPMBCM_00882 3.1e-58
CLKPMBCM_00883 2.3e-41
CLKPMBCM_00884 6.2e-62 S Pfam:Phage_holin_6_1
CLKPMBCM_00885 6e-171 S N-acetylmuramoyl-L-alanine amidase activity
CLKPMBCM_00888 6.6e-08
CLKPMBCM_00890 2.3e-212 mnaA 5.1.3.14 G Belongs to the UDP-N-acetylglucosamine 2-epimerase family
CLKPMBCM_00891 3.7e-88 gtcA S Teichoic acid glycosylation protein
CLKPMBCM_00892 1.2e-76 fld C Flavodoxin
CLKPMBCM_00893 1.9e-160 map 3.4.11.18 E Methionine Aminopeptidase
CLKPMBCM_00894 5.2e-162 yihY S Belongs to the UPF0761 family
CLKPMBCM_00895 2.4e-167 galU 2.7.7.9 M UTP-glucose-1-phosphate uridylyltransferase
CLKPMBCM_00896 8.3e-179 E ABC transporter, ATP-binding protein
CLKPMBCM_00897 9e-284 proWX EM Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)
CLKPMBCM_00898 1.4e-66 O OsmC-like protein
CLKPMBCM_00899 2.4e-155 ltrA S Bacterial low temperature requirement A protein (LtrA)
CLKPMBCM_00900 3.9e-113 2.7.6.5 T Region found in RelA / SpoT proteins
CLKPMBCM_00901 7.6e-115 K response regulator
CLKPMBCM_00902 6.6e-224 sptS 2.7.13.3 T Histidine kinase
CLKPMBCM_00903 0.0 pepX 3.4.14.11 E Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline
CLKPMBCM_00904 0.0 pepN 3.4.11.2 E aminopeptidase
CLKPMBCM_00905 4.7e-137 S haloacid dehalogenase-like hydrolase
CLKPMBCM_00907 0.0 glmS 2.6.1.16 M Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
CLKPMBCM_00908 1.8e-69
CLKPMBCM_00909 5.1e-105 fic D Fic/DOC family
CLKPMBCM_00910 4.9e-137 ppm1 GT2 M Glycosyl transferase family 2
CLKPMBCM_00911 1.3e-91 S Domain of unknown function (DUF4811)
CLKPMBCM_00912 3e-265 lmrB EGP Major facilitator Superfamily
CLKPMBCM_00913 1.6e-76 K MerR HTH family regulatory protein
CLKPMBCM_00914 1.7e-63 oppA E ABC transporter substrate-binding protein
CLKPMBCM_00915 3.4e-76 oppA E ABC transporter substrate-binding protein
CLKPMBCM_00916 3e-111 oppA E ABC transporter substrate-binding protein
CLKPMBCM_00917 1.6e-61 pdxH S Pyridoxamine 5'-phosphate oxidase
CLKPMBCM_00918 2.7e-249 pepC 3.4.22.40 E Peptidase C1-like family
CLKPMBCM_00919 3.1e-25 rhaS6 K helix_turn_helix, arabinose operon control protein
CLKPMBCM_00920 5e-170 I Carboxylesterase family
CLKPMBCM_00921 3.9e-307 S Predicted membrane protein (DUF2207)
CLKPMBCM_00922 5.4e-121 S Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49)
CLKPMBCM_00923 1.2e-52
CLKPMBCM_00924 5.4e-142 pdxK 2.7.1.35 H Phosphomethylpyrimidine kinase
CLKPMBCM_00925 4.9e-91 S ECF-type riboflavin transporter, S component
CLKPMBCM_00926 1.6e-27 dmpI 5.3.2.6 G Belongs to the 4-oxalocrotonate tautomerase family
CLKPMBCM_00927 3.7e-56
CLKPMBCM_00928 1.8e-11
CLKPMBCM_00929 4.9e-214 S Uncharacterized protein conserved in bacteria (DUF2325)
CLKPMBCM_00930 4.6e-149 S Uncharacterised 5xTM membrane BCR, YitT family COG1284
CLKPMBCM_00931 3e-57 arsC 1.20.4.1 P Belongs to the ArsC family
CLKPMBCM_00932 2e-49 rplU J This protein binds to 23S rRNA in the presence of protein L20
CLKPMBCM_00933 2.8e-48 rpmA J Belongs to the bacterial ribosomal protein bL27 family
CLKPMBCM_00934 3.2e-198 pepP 3.4.11.9, 3.4.13.9 E Creatinase/Prolidase N-terminal domain
CLKPMBCM_00935 1.1e-101 efp J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
CLKPMBCM_00936 8.2e-73 yqhY S Asp23 family, cell envelope-related function
CLKPMBCM_00937 3.6e-67 nusB K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
CLKPMBCM_00938 3.5e-149 folD 1.5.1.5, 3.5.4.9 F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
CLKPMBCM_00939 9.8e-250 xseA 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CLKPMBCM_00940 1.1e-34 xseB 3.1.11.6 L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides
CLKPMBCM_00941 3.5e-160 ispA 2.5.1.1, 2.5.1.10, 2.5.1.29, 2.5.1.90 H Belongs to the FPP GGPP synthase family
CLKPMBCM_00942 1.3e-153 rrmJ 2.1.1.226, 2.1.1.227 J Ribosomal RNA large subunit methyltransferase J
CLKPMBCM_00943 9.7e-292 recN L May be involved in recombinational repair of damaged DNA
CLKPMBCM_00944 1e-47
CLKPMBCM_00945 2.3e-110 gmk 2.7.4.8, 4.1.1.23 F Essential for recycling GMP and indirectly, cGMP
CLKPMBCM_00946 2.3e-31 rpoZ 2.7.7.6 K Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
CLKPMBCM_00947 0.0 priA L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CLKPMBCM_00948 1.3e-171 fmt 2.1.2.9 J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
CLKPMBCM_00949 3.2e-237 sun 2.1.1.176 J Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
CLKPMBCM_00950 2.7e-140 stp 3.1.3.16 T phosphatase
CLKPMBCM_00951 0.0 KLT serine threonine protein kinase
CLKPMBCM_00952 5.5e-161 rsgA 3.1.3.100 S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit
CLKPMBCM_00953 2e-120 rpe 5.1.3.1 G Belongs to the ribulose-phosphate 3-epimerase family
CLKPMBCM_00954 2.7e-120 thiN 2.7.6.2 H thiamine pyrophosphokinase
CLKPMBCM_00955 1.2e-25 rpmB J Belongs to the bacterial ribosomal protein bL28 family
CLKPMBCM_00956 1.4e-57 asp S Asp23 family, cell envelope-related function
CLKPMBCM_00957 1.1e-303 yloV S DAK2 domain fusion protein YloV
CLKPMBCM_00958 0.0 recG 3.6.4.12 L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CLKPMBCM_00959 7.8e-180 plsX 2.3.1.15 I Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA
CLKPMBCM_00960 2.2e-35 acpP IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis
CLKPMBCM_00961 9e-192 oppD P Belongs to the ABC transporter superfamily
CLKPMBCM_00962 4.6e-177 oppF P Belongs to the ABC transporter superfamily
CLKPMBCM_00963 2.3e-176 oppB P ABC transporter permease
CLKPMBCM_00964 9.7e-161 oppC P Binding-protein-dependent transport system inner membrane component
CLKPMBCM_00965 8.3e-184 S AAA domain
CLKPMBCM_00966 2.9e-122 gpmA 5.4.2.11 G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
CLKPMBCM_00967 9.9e-12
CLKPMBCM_00968 7.2e-37
CLKPMBCM_00969 5.5e-153 czcD P cation diffusion facilitator family transporter
CLKPMBCM_00970 2.6e-52 K Transcriptional regulator, ArsR family
CLKPMBCM_00971 1.5e-129 pgm3 G Belongs to the phosphoglycerate mutase family
CLKPMBCM_00972 9.4e-109 thiJ 2.7.11.1, 3.5.1.124 S DJ-1/PfpI family
CLKPMBCM_00973 5e-151 1.6.5.2 GM NmrA-like family
CLKPMBCM_00974 1.5e-65 rpsI J Belongs to the universal ribosomal protein uS9 family
CLKPMBCM_00975 5e-78 rplM J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
CLKPMBCM_00976 1.9e-149 truA 5.4.99.12 J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs
CLKPMBCM_00977 1.8e-139 ecfT U Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CLKPMBCM_00978 7.3e-206 L Putative transposase DNA-binding domain
CLKPMBCM_00979 4.2e-158 ecfA 3.6.3.55 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CLKPMBCM_00980 4e-153 ecfA1 P ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
CLKPMBCM_00981 7.4e-62 rplQ J Ribosomal protein L17
CLKPMBCM_00982 4.8e-171 rpoA 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CLKPMBCM_00983 2.6e-62 rpsK J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
CLKPMBCM_00984 4.2e-56 rpsM J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
CLKPMBCM_00985 6e-15 rpmJ J Belongs to the bacterial ribosomal protein bL36 family
CLKPMBCM_00986 1.4e-33 infA J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
CLKPMBCM_00987 6.6e-119 adk 2.7.4.3 F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism
CLKPMBCM_00988 4.5e-236 secY U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently
CLKPMBCM_00989 1.3e-70 rplO J Binds to the 23S rRNA
CLKPMBCM_00990 1.4e-23 rpmD J Ribosomal protein L30
CLKPMBCM_00991 1.9e-76 rpsE J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
CLKPMBCM_00992 1.5e-56 rplR J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
CLKPMBCM_00993 5e-93 rplF J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
CLKPMBCM_00994 2.1e-67 rpsH J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
CLKPMBCM_00995 2.3e-29 rpsN J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
CLKPMBCM_00996 7.2e-95 rplE J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
CLKPMBCM_00997 1.1e-34 rplX J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
CLKPMBCM_00998 5.6e-59 rplN J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
CLKPMBCM_00999 7.7e-42 rpsQ J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
CLKPMBCM_01000 2.2e-25 rpmC J Belongs to the universal ribosomal protein uL29 family
CLKPMBCM_01001 6.6e-75 rplP J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
CLKPMBCM_01002 1.6e-120 rpsC J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
CLKPMBCM_01003 4e-54 rplV J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
CLKPMBCM_01004 1.9e-46 rpsS J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
CLKPMBCM_01005 1.6e-154 rplB J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
CLKPMBCM_01006 6.3e-45 rplW J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome
CLKPMBCM_01007 1e-105 rplD J Forms part of the polypeptide exit tunnel
CLKPMBCM_01008 1.7e-111 rplC J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
CLKPMBCM_01009 2.9e-48 rpsJ J Involved in the binding of tRNA to the ribosomes
CLKPMBCM_01010 0.0 fusA J Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
CLKPMBCM_01011 1e-81 rpsG J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA
CLKPMBCM_01012 3.5e-70 rpsL J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
CLKPMBCM_01013 4e-95 pilD 3.4.23.43 NOU Bacterial Peptidase A24 N-terminal domain
CLKPMBCM_01014 0.0 rpoC 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CLKPMBCM_01015 0.0 rpoB 2.7.7.6 K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
CLKPMBCM_01016 0.0 clpC O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE
CLKPMBCM_01018 1.6e-08
CLKPMBCM_01019 8e-39 ps308 K AntA/AntB antirepressor
CLKPMBCM_01020 1.8e-16
CLKPMBCM_01022 1.6e-13
CLKPMBCM_01024 1.4e-71 S AAA domain
CLKPMBCM_01025 1.1e-109 S sequence-specific DNA binding transcription factor activity
CLKPMBCM_01026 5.9e-255 S helicase activity
CLKPMBCM_01028 7e-95 S Protein of unknown function (DUF669)
CLKPMBCM_01030 0.0 S hydrolase activity
CLKPMBCM_01033 2e-42 S VRR-NUC domain
CLKPMBCM_01035 2.3e-15 S Domain of Unknown Function (DUF1599)
CLKPMBCM_01036 1e-68 arpU S Phage transcriptional regulator, ArpU family
CLKPMBCM_01037 7.5e-94 S HNH endonuclease
CLKPMBCM_01038 1e-78 S Phage terminase, small subunit
CLKPMBCM_01040 4.2e-227 S Phage Terminase
CLKPMBCM_01042 5.3e-159 S Phage portal protein
CLKPMBCM_01043 6.5e-120 S Clp protease
CLKPMBCM_01044 7.8e-211 S peptidase activity
CLKPMBCM_01045 1.4e-36 S Phage gp6-like head-tail connector protein
CLKPMBCM_01046 5.7e-08 S Phage head-tail joining protein
CLKPMBCM_01047 9.1e-09 S Bacteriophage HK97-gp10, putative tail-component
CLKPMBCM_01049 9.1e-09 S Pfam:Phage_TTP_1
CLKPMBCM_01052 0.0 S peptidoglycan catabolic process
CLKPMBCM_01053 4.8e-142 S Phage tail protein
CLKPMBCM_01054 4.8e-211 S Phage minor structural protein
CLKPMBCM_01056 1.8e-97 S N-acetylmuramoyl-L-alanine amidase activity
CLKPMBCM_01059 8.4e-21
CLKPMBCM_01062 1.2e-118 lysA2 M Glycosyl hydrolases family 25
CLKPMBCM_01064 5.2e-14
CLKPMBCM_01065 3.8e-09
CLKPMBCM_01066 5.2e-143 S Phage integrase family
CLKPMBCM_01067 1.1e-40
CLKPMBCM_01069 4.1e-57 S Hypothetical protein (DUF2513)
CLKPMBCM_01070 6.1e-19 S Pfam:Peptidase_M78
CLKPMBCM_01071 1.6e-16 ps115 K sequence-specific DNA binding
CLKPMBCM_01072 1.8e-19 K Helix-turn-helix XRE-family like proteins
CLKPMBCM_01073 0.0 thrS 6.1.1.3 J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
CLKPMBCM_01074 6.2e-160 dnaI L Primosomal protein DnaI
CLKPMBCM_01075 7.9e-244 dnaB L Replication initiation and membrane attachment
CLKPMBCM_01076 7.8e-82 nrdR K Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
CLKPMBCM_01077 2.8e-100 coaE 2.7.1.24 F Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
CLKPMBCM_01078 4.2e-155 fpg 3.2.2.23, 4.2.99.18 L Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates
CLKPMBCM_01079 0.0 polA 2.7.7.7 L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CLKPMBCM_01080 2e-49
CLKPMBCM_01081 4.4e-152 levD G PTS system mannose/fructose/sorbose family IID component
CLKPMBCM_01082 9.2e-137 M PTS system sorbose-specific iic component
CLKPMBCM_01083 2.1e-93 2.7.1.191 G PTS system sorbose subfamily IIB component
CLKPMBCM_01084 1.4e-72 levA G PTS system fructose IIA component
CLKPMBCM_01085 1.5e-164 rbsB G Periplasmic binding protein domain
CLKPMBCM_01086 3.3e-215 baeS F Sensor histidine kinase
CLKPMBCM_01087 2e-115 baeR K helix_turn_helix, Lux Regulon
CLKPMBCM_01088 3.3e-231 G Bacterial extracellular solute-binding protein
CLKPMBCM_01089 3.8e-128 deoC 4.1.2.4 F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
CLKPMBCM_01090 2.3e-117 K UTRA
CLKPMBCM_01091 9.1e-253 mpl 6.3.2.4, 6.3.2.45, 6.3.2.8 M Belongs to the MurCDEF family
CLKPMBCM_01092 8.2e-43 cutC P Participates in the control of copper homeostasis
CLKPMBCM_01093 4.1e-121 pheT 6.1.1.20 J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily
CLKPMBCM_01094 6.2e-54 ytpP 2.7.1.180, 5.3.4.1 CO Thioredoxin
CLKPMBCM_01095 9.8e-12
CLKPMBCM_01096 8e-125 trmB 2.1.1.297, 2.1.1.33 J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA
CLKPMBCM_01097 2e-222 ecsB U ABC transporter
CLKPMBCM_01098 3.7e-134 ecsA V ABC transporter, ATP-binding protein
CLKPMBCM_01099 9.2e-77 hit FG Scavenger mRNA decapping enzyme C-term binding
CLKPMBCM_01100 2e-51
CLKPMBCM_01101 3.6e-23 S YtxH-like protein
CLKPMBCM_01102 3.3e-145 prsA 5.2.1.8 M Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins
CLKPMBCM_01103 8.7e-184 cbf S Metal dependent phosphohydrolases with conserved 'HD' motif.
CLKPMBCM_01104 0.0 L AAA domain
CLKPMBCM_01105 1.2e-214 yhaO L Ser Thr phosphatase family protein
CLKPMBCM_01106 3.6e-55 yheA S Belongs to the UPF0342 family
CLKPMBCM_01107 0.0 pbp2A 2.4.1.129, 3.4.16.4 GT51 M penicillin-binding protein
CLKPMBCM_01108 5.5e-158 rluA 5.4.99.23 J Responsible for synthesis of pseudouridine from uracil
CLKPMBCM_01110 8.8e-11 adk 2.7.4.3 F adenylate kinase activity
CLKPMBCM_01111 2.1e-140 neo 2.7.1.87, 2.7.1.95 F Belongs to the aminoglycoside phosphotransferase family
CLKPMBCM_01112 1.1e-189 V Beta-lactamase
CLKPMBCM_01115 1.5e-74
CLKPMBCM_01116 3.9e-32 hxlR K Transcriptional regulator, HxlR family
CLKPMBCM_01117 2.9e-81 XK27_02070 S Nitroreductase family
CLKPMBCM_01118 6e-140 nfrA 1.5.1.38, 1.5.1.39 C nitroreductase
CLKPMBCM_01119 2.4e-283 pipD E Dipeptidase
CLKPMBCM_01120 6.1e-154 msmR K AraC-like ligand binding domain
CLKPMBCM_01121 0.0 gph G Transporter
CLKPMBCM_01122 0.0 rafA 3.2.1.22 G alpha-galactosidase
CLKPMBCM_01123 2.4e-278 gtfA 2.4.1.7 GH13 G Sucrose glucosyltransferase
CLKPMBCM_01124 1.8e-226 glyA 2.1.2.1 E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
CLKPMBCM_01125 4.7e-177 ABC-SBP S ABC transporter
CLKPMBCM_01126 1.3e-138 XK27_08840 U Belongs to the binding-protein-dependent transport system permease family
CLKPMBCM_01127 2.2e-134 XK27_08845 S ABC transporter, ATP-binding protein
CLKPMBCM_01128 1.2e-296 ybeC E amino acid
CLKPMBCM_01129 1.4e-40 rpmE2 J Ribosomal protein L31
CLKPMBCM_01130 6.1e-260 murF 6.3.2.10 M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein
CLKPMBCM_01131 2.5e-267 cshA 3.6.4.13 F DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity
CLKPMBCM_01132 3.2e-59 acpS 2.7.6.3, 2.7.8.7, 5.1.1.1 I Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
CLKPMBCM_01133 1.3e-212 alr 5.1.1.1 E Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CLKPMBCM_01134 3.5e-123 S (CBS) domain
CLKPMBCM_01135 4.7e-182 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
CLKPMBCM_01136 2.5e-103 pth 3.1.1.29 J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis
CLKPMBCM_01137 0.0 mfd L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CLKPMBCM_01138 5.4e-34 yabO J S4 domain protein
CLKPMBCM_01139 4e-60 divIC D Septum formation initiator
CLKPMBCM_01140 2.7e-58 yabR J S1 RNA binding domain
CLKPMBCM_01141 5.2e-240 tilS 2.4.2.8, 6.3.4.19 J Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine
CLKPMBCM_01142 0.0 ftsH O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CLKPMBCM_01143 0.0 S membrane
CLKPMBCM_01144 8.4e-154 hslO O Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
CLKPMBCM_01145 3.8e-190 dus J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CLKPMBCM_01146 6.8e-300 lysS 6.1.1.6 J Belongs to the class-II aminoacyl-tRNA synthetase family
CLKPMBCM_01147 7e-94 S Rib/alpha-like repeat
CLKPMBCM_01149 6.3e-100 yagE E amino acid
CLKPMBCM_01150 2.8e-10 yagE E amino acid
CLKPMBCM_01151 5.3e-113 GM NmrA-like family
CLKPMBCM_01152 1.5e-149 xerD L Phage integrase, N-terminal SAM-like domain
CLKPMBCM_01153 1.1e-88 dedA 3.1.3.1 S SNARE associated Golgi protein
CLKPMBCM_01154 2.7e-174 iunH 3.2.2.1 F inosine-uridine preferring nucleoside hydrolase
CLKPMBCM_01155 0.0 uvrC L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
CLKPMBCM_01156 1.3e-240 obg S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
CLKPMBCM_01157 0.0 oatA I Acyltransferase
CLKPMBCM_01158 1.2e-177 rnz 3.1.26.11 J Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA
CLKPMBCM_01159 1.8e-142 XK27_05435 1.1.1.100 S Belongs to the short-chain dehydrogenases reductases (SDR) family
CLKPMBCM_01160 9.8e-47 yrvD S Lipopolysaccharide assembly protein A domain
CLKPMBCM_01161 1e-27 rpmF J Belongs to the bacterial ribosomal protein bL32 family
CLKPMBCM_01162 2.7e-304 cpdB 3.1.3.6, 3.1.4.16 F Belongs to the 5'-nucleotidase family
CLKPMBCM_01163 6.9e-27 S Protein of unknown function (DUF2929)
CLKPMBCM_01164 0.0 dnaE 2.7.7.7 L DNA polymerase
CLKPMBCM_01165 8e-182 pfkA 2.7.1.11 F Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis
CLKPMBCM_01166 0.0 pyk 2.7.1.40, 2.7.7.4 G Belongs to the pyruvate kinase family
CLKPMBCM_01167 3.7e-165 cvfB S S1 domain
CLKPMBCM_01168 8.2e-165 xerD D recombinase XerD
CLKPMBCM_01169 2e-61 ribT K acetyltransferase
CLKPMBCM_01170 1.4e-133 scpA D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
CLKPMBCM_01171 1.7e-105 scpB D Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
CLKPMBCM_01172 1.2e-129 rluB 5.4.99.19, 5.4.99.21, 5.4.99.22 J Belongs to the pseudouridine synthase RsuA family
CLKPMBCM_01173 1.6e-60 M Lysin motif
CLKPMBCM_01174 7.8e-95 U Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
CLKPMBCM_01175 2.1e-117 cmk 1.17.7.4, 2.5.1.19, 2.7.1.26, 2.7.4.25, 2.7.7.2, 6.3.2.1 F Belongs to the cytidylate kinase family. Type 1 subfamily
CLKPMBCM_01176 4.3e-217 rpsA 1.17.7.4 J Ribosomal protein S1
CLKPMBCM_01177 1.5e-244 der 1.1.1.399, 1.1.1.95 S GTPase that plays an essential role in the late steps of ribosome biogenesis
CLKPMBCM_01178 6.7e-41 hup L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions
CLKPMBCM_01179 3.6e-230 S Tetratricopeptide repeat protein
CLKPMBCM_01180 8.2e-290 hsdM 2.1.1.72 V type I restriction-modification system
CLKPMBCM_01181 1.2e-266 pipD E Dipeptidase
CLKPMBCM_01182 3e-37
CLKPMBCM_01183 4.6e-106 K WHG domain
CLKPMBCM_01184 3.2e-95 nqr 1.5.1.36 S reductase
CLKPMBCM_01185 1.4e-98 azr 1.5.1.36 S NADPH-dependent FMN reductase
CLKPMBCM_01186 1.1e-200 4.2.1.126 S Bacterial protein of unknown function (DUF871)
CLKPMBCM_01187 3.1e-147 3.1.3.48 T Tyrosine phosphatase family
CLKPMBCM_01188 3.6e-179 apbE 2.7.1.180 H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein
CLKPMBCM_01189 7.1e-95 cvpA S Colicin V production protein
CLKPMBCM_01190 1.5e-129 rsmG 2.1.1.170 J Specifically methylates the N7 position of a guanine in 16S rRNA
CLKPMBCM_01191 2e-142 noc K Belongs to the ParB family
CLKPMBCM_01192 9.7e-138 soj D Sporulation initiation inhibitor
CLKPMBCM_01193 1.6e-152 spo0J K Belongs to the ParB family
CLKPMBCM_01194 6.5e-43 yyzM S Bacterial protein of unknown function (DUF951)
CLKPMBCM_01195 2e-200 ychF J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner
CLKPMBCM_01196 1.9e-147 XK27_01040 S Protein of unknown function (DUF1129)
CLKPMBCM_01197 1.3e-296 V ABC transporter, ATP-binding protein
CLKPMBCM_01198 0.0 V ABC transporter
CLKPMBCM_01199 7.4e-121 K response regulator
CLKPMBCM_01200 1.2e-200 hpk31 2.7.13.3 T His Kinase A (phospho-acceptor) domain
CLKPMBCM_01201 2.2e-306 murE 6.3.2.13, 6.3.2.7 M Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
CLKPMBCM_01202 1.2e-143 racD 5.1.1.13 M Belongs to the aspartate glutamate racemases family
CLKPMBCM_01203 1.7e-165 natA S ABC transporter, ATP-binding protein
CLKPMBCM_01204 1.8e-218 natB CP ABC-2 family transporter protein
CLKPMBCM_01205 0.0 malZ 3.2.1.20 GH31 G Belongs to the glycosyl hydrolase 31 family
CLKPMBCM_01206 9.9e-135 fruR K DeoR C terminal sensor domain
CLKPMBCM_01207 4.5e-166 pfkB 2.7.1.11, 2.7.1.56 H Belongs to the carbohydrate kinase PfkB family. LacC subfamily
CLKPMBCM_01208 0.0 fruA 2.7.1.200, 2.7.1.202 GT Phosphotransferase System
CLKPMBCM_01209 4.2e-67 2.7.7.7 M domain protein
CLKPMBCM_01210 6.8e-147 2.7.7.7 M domain protein
CLKPMBCM_01211 2.2e-137 3.1.3.102, 3.1.3.104, 3.1.3.23 G Sucrose-6F-phosphate phosphohydrolase
CLKPMBCM_01212 7.5e-61
CLKPMBCM_01213 1.2e-41 L helicase
CLKPMBCM_01214 0.0 S Protein of unknown function DUF262
CLKPMBCM_01215 1.7e-54 S Protein of unknown function DUF262
CLKPMBCM_01216 1.7e-159
CLKPMBCM_01217 2.7e-220 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
CLKPMBCM_01218 1.1e-50 mgtA 3.6.3.2 P COG0474 Cation transport ATPase
CLKPMBCM_01219 1.6e-28 yphH S Cupin domain
CLKPMBCM_01220 5.5e-86 tpx 1.11.1.15 O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CLKPMBCM_01221 4.4e-55 1.14.99.57 S Antibiotic biosynthesis monooxygenase
CLKPMBCM_01223 2.5e-176 XK27_00915 C Luciferase-like monooxygenase
CLKPMBCM_01224 0.0 uvrA3 L excinuclease ABC, A subunit
CLKPMBCM_01225 2e-136 S PFAM Archaeal ATPase
CLKPMBCM_01226 5.3e-08 S PFAM Archaeal ATPase
CLKPMBCM_01227 8e-138 cbh 3.5.1.24 M Linear amide C-N hydrolase, choloylglycine hydrolase family protein
CLKPMBCM_01229 2.2e-22 XK27_08875 O PFAM peptidase M10A and M12B, matrixin and adamalysin
CLKPMBCM_01230 7.9e-137 H Nodulation protein S (NodS)
CLKPMBCM_01231 3.9e-268 mntH P H( )-stimulated, divalent metal cation uptake system
CLKPMBCM_01232 1.1e-53 yitW S Iron-sulfur cluster assembly protein
CLKPMBCM_01233 1e-273 sufB O assembly protein SufB
CLKPMBCM_01234 1.9e-80 nifU C SUF system FeS assembly protein, NifU family
CLKPMBCM_01235 2.3e-229 sufS 2.8.1.7, 4.4.1.16 E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CLKPMBCM_01236 3.8e-221 sufD O FeS assembly protein SufD
CLKPMBCM_01237 3.2e-144 sufC O FeS assembly ATPase SufC
CLKPMBCM_01238 1.1e-195 asd 1.2.1.11 E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CLKPMBCM_01239 4.6e-166 aspC 2.6.1.1 E Aminotransferase
CLKPMBCM_01240 4.7e-151 L PFAM transposase, IS204 IS1001 IS1096 IS1165 family protein
CLKPMBCM_01241 1.5e-71 lacA 5.3.1.26 G Ribose/Galactose Isomerase
CLKPMBCM_01242 3.1e-104 rpiB 2.1.1.222, 2.1.1.64, 5.3.1.26, 5.3.1.6 G Ribose/Galactose Isomerase
CLKPMBCM_01243 5.2e-119 S Domain of unknown function (DUF4867)
CLKPMBCM_01244 1.3e-82 2.7.1.200, 2.7.1.202, 2.7.1.204 G Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
CLKPMBCM_01245 9.1e-50 2.7.1.200, 2.7.1.204 G PTS system, Lactose/Cellobiose specific IIB subunit
CLKPMBCM_01246 2.5e-264 gatC G PTS system sugar-specific permease component
CLKPMBCM_01247 3.1e-37
CLKPMBCM_01248 2.3e-132 lacT K CAT RNA binding domain
CLKPMBCM_01249 4e-54 lacF 2.7.1.196, 2.7.1.205, 2.7.1.207 G PTS system, Lactose/Cellobiose specific IIA subunit
CLKPMBCM_01250 2e-303 celB 2.7.1.196, 2.7.1.205, 2.7.1.207 G Phosphotransferase system, EIIC
CLKPMBCM_01251 1.1e-280 lacG 3.2.1.85 G Belongs to the glycosyl hydrolase 1 family
CLKPMBCM_01252 2.6e-163 K LysR family
CLKPMBCM_01253 0.0 1.3.5.4 C FMN_bind
CLKPMBCM_01254 1.2e-258 P Sodium:sulfate symporter transmembrane region
CLKPMBCM_01255 3.5e-158 glsA 3.5.1.2 E Belongs to the glutaminase family
CLKPMBCM_01256 8.6e-99 scrR K helix_turn _helix lactose operon repressor
CLKPMBCM_01257 1.5e-240 scrA 2.7.1.211, 5.3.1.1 G phosphotransferase system
CLKPMBCM_01258 2e-204 malL 3.2.1.10 GH13 G Alpha-amylase domain
CLKPMBCM_01259 2.1e-166 rafA 3.2.1.22 G alpha-galactosidase
CLKPMBCM_01260 2.3e-22 dhaM 2.7.1.121 S PTS system fructose IIA component
CLKPMBCM_01261 1.8e-110 3.6.1.27 I Acid phosphatase homologues
CLKPMBCM_01262 9.4e-47 E Phospholipase B
CLKPMBCM_01263 1.3e-153 gadC E Contains amino acid permease domain
CLKPMBCM_01264 3.8e-32 gadC E Contains amino acid permease domain
CLKPMBCM_01265 8.2e-22 gadC E Contains amino acid permease domain
CLKPMBCM_01269 8e-108 msbA2 3.6.3.44 V ABC transporter
CLKPMBCM_01270 3.6e-112 KLT Protein kinase domain
CLKPMBCM_01273 2.3e-46 2.7.13.3 T GHKL domain
CLKPMBCM_01274 3.8e-50 K LytTr DNA-binding domain
CLKPMBCM_01275 5.1e-243 gor 1.8.1.7 C pyridine nucleotide-disulfide oxidoreductase
CLKPMBCM_01276 6.4e-210 guaB 1.1.1.205 F Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides
CLKPMBCM_01277 1.2e-100 3.1.1.5 E GDSL-like Lipase/Acylhydrolase
CLKPMBCM_01278 1.5e-191 ldhA 1.1.1.28 C Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CLKPMBCM_01279 0.0 S domain, Protein
CLKPMBCM_01280 3.1e-99 E amino acid
CLKPMBCM_01281 1e-148 E amino acid
CLKPMBCM_01282 4.9e-168 K LysR substrate binding domain
CLKPMBCM_01283 0.0 1.3.5.4 C FAD binding domain
CLKPMBCM_01284 1e-238 brnQ U Component of the transport system for branched-chain amino acids
CLKPMBCM_01285 2.1e-135 menG 2.1.1.163, 2.1.1.201 H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2)
CLKPMBCM_01286 7.9e-179 pip 3.4.11.5 E Releases the N-terminal proline from various substrates
CLKPMBCM_01287 2.1e-182 cbh 3.5.1.24 M Linear amide C-N hydrolases, choloylglycine hydrolase family
CLKPMBCM_01288 1.8e-28 yhjX_2 P Major Facilitator Superfamily
CLKPMBCM_01289 5.9e-37 yhjX_2 P Major Facilitator Superfamily
CLKPMBCM_01290 6.5e-70 yhjX_2 P Major Facilitator Superfamily
CLKPMBCM_01291 1.3e-24 yhjX_2 P Major Facilitator Superfamily
CLKPMBCM_01292 3.2e-131 arbZ I Phosphate acyltransferases
CLKPMBCM_01296 2.9e-158 S CAAX protease self-immunity
CLKPMBCM_01297 6.2e-11 S Enterocin A Immunity
CLKPMBCM_01299 0.0 pacL 3.6.3.8, 3.6.3.9 P Cation transporter/ATPase, N-terminus
CLKPMBCM_01300 4.3e-09 rssA S Phospholipase, patatin family
CLKPMBCM_01301 8.7e-252 glnPH2 P ABC transporter permease
CLKPMBCM_01302 2.3e-128 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
CLKPMBCM_01303 1.1e-95 K Acetyltransferase (GNAT) domain
CLKPMBCM_01304 8.6e-159 pstS P Phosphate
CLKPMBCM_01305 3.6e-161 pstC P probably responsible for the translocation of the substrate across the membrane
CLKPMBCM_01306 3.1e-156 pstA P Phosphate transport system permease protein PstA
CLKPMBCM_01307 9.1e-147 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CLKPMBCM_01308 3.9e-139 pstB 3.6.3.27 P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system
CLKPMBCM_01309 7.1e-108 phoU P Plays a role in the regulation of phosphate uptake
CLKPMBCM_01310 1.7e-47 yvbK 3.1.3.25 K COG0454 Histone acetyltransferase HPA2 and related acetyltransferases
CLKPMBCM_01311 1.1e-278 S C4-dicarboxylate anaerobic carrier
CLKPMBCM_01312 8.4e-84 dps P Belongs to the Dps family
CLKPMBCM_01313 1.2e-155 rbsK 2.7.1.15 H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CLKPMBCM_01314 5e-125 rpiA 2.7.1.12, 2.7.1.15, 5.3.1.6 G Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
CLKPMBCM_01315 1.7e-173 rihB 3.2.2.1 F Nucleoside
CLKPMBCM_01316 8.9e-133 gntR K UbiC transcription regulator-associated domain protein
CLKPMBCM_01318 5.7e-230 KLT Protein kinase domain
CLKPMBCM_01319 4.2e-135 V ABC transporter transmembrane region
CLKPMBCM_01320 3.4e-163 pepT2 3.4.11.14, 3.4.11.4 E Cleaves the N-terminal amino acid of tripeptides
CLKPMBCM_01321 2.9e-73 S Protein of unknown function (DUF3290)
CLKPMBCM_01322 1.3e-111 yviA S Protein of unknown function (DUF421)
CLKPMBCM_01323 1.3e-148 K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
CLKPMBCM_01324 2.3e-181 dnaQ 2.7.7.7 L EXOIII
CLKPMBCM_01325 4.5e-157 dkg S reductase
CLKPMBCM_01326 1.9e-155 endA F DNA RNA non-specific endonuclease
CLKPMBCM_01327 3e-281 pipD E Dipeptidase
CLKPMBCM_01328 4.6e-202 malK P ATPases associated with a variety of cellular activities
CLKPMBCM_01329 2.1e-157 gtsB P ABC-type sugar transport systems, permease components
CLKPMBCM_01330 3.2e-147 gtsC P Binding-protein-dependent transport system inner membrane component
CLKPMBCM_01331 3e-248 YSH1 S Zn-dependent metallo-hydrolase RNA specificity domain
CLKPMBCM_01332 4.8e-238 G Bacterial extracellular solute-binding protein
CLKPMBCM_01333 3.4e-48 ypaA S Protein of unknown function (DUF1304)
CLKPMBCM_01334 4.1e-75 yybA 2.3.1.57 K Transcriptional regulator
CLKPMBCM_01335 2.6e-86 paiA 2.3.1.57 K Acetyltransferase (GNAT) domain
CLKPMBCM_01336 8.4e-78 yjcF S Acetyltransferase (GNAT) domain
CLKPMBCM_01337 2e-166 2.7.1.59 G BadF/BadG/BcrA/BcrD ATPase family
CLKPMBCM_01338 3.8e-160 3.5.2.6 V Beta-lactamase enzyme family
CLKPMBCM_01339 2e-95 yobS K Bacterial regulatory proteins, tetR family
CLKPMBCM_01340 0.0 ydgH S MMPL family
CLKPMBCM_01341 2e-141 cof S haloacid dehalogenase-like hydrolase
CLKPMBCM_01342 1.7e-125 S SNARE associated Golgi protein
CLKPMBCM_01343 1.1e-20 K Transcriptional regulator
CLKPMBCM_01344 0.0 parC 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
CLKPMBCM_01345 0.0 parE 5.99.1.3 L Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule
CLKPMBCM_01346 9.8e-115 plsY 2.3.1.15, 3.5.1.104 I Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
CLKPMBCM_01347 1e-105 lacA 2.3.1.79 S Transferase hexapeptide repeat
CLKPMBCM_01348 3.2e-43 akr5f 1.1.1.346 S reductase
CLKPMBCM_01349 1.3e-23 akr5f 1.1.1.346 S reductase
CLKPMBCM_01350 6.2e-90 ybhL S Belongs to the BI1 family
CLKPMBCM_01351 6.5e-32
CLKPMBCM_01352 5.6e-13 4.1.1.45 S Amidohydrolase
CLKPMBCM_01353 9.4e-231 yrvN L AAA C-terminal domain
CLKPMBCM_01354 0.0 S PglZ domain
CLKPMBCM_01355 8.4e-14 S PglZ domain
CLKPMBCM_01356 9.8e-126 ptlF S KR domain
CLKPMBCM_01357 3.9e-108 drgA C nitroreductase
CLKPMBCM_01358 1e-63 K Bacterial regulatory helix-turn-helix protein, lysR family
CLKPMBCM_01359 3.9e-151 L Transposase
CLKPMBCM_01360 1.1e-46 L Transposase
CLKPMBCM_01361 2.7e-174 ppx 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
CLKPMBCM_01362 2.1e-263 S Uncharacterized protein conserved in bacteria (DUF2252)
CLKPMBCM_01363 0.0 ppk 2.7.4.1 P Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CLKPMBCM_01364 7.5e-283 ppx3 3.6.1.11, 3.6.1.40 FP exopolyphosphatase
CLKPMBCM_01365 2e-168 yibE S overlaps another CDS with the same product name
CLKPMBCM_01366 6.8e-271 yjcE P Sodium proton antiporter
CLKPMBCM_01367 1.1e-74
CLKPMBCM_01368 6.2e-207 ddl 6.3.2.4 F Belongs to the D-alanine--D-alanine ligase family
CLKPMBCM_01369 6.2e-261 S Cysteine-rich secretory protein family
CLKPMBCM_01370 3e-124
CLKPMBCM_01371 1.2e-112 luxT K Bacterial regulatory proteins, tetR family
CLKPMBCM_01372 1e-238 cycA E Amino acid permease
CLKPMBCM_01373 1.7e-101 S CAAX protease self-immunity
CLKPMBCM_01374 2.7e-180 prs 2.7.6.1 F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CLKPMBCM_01375 7e-62
CLKPMBCM_01376 4.4e-123 S Alpha/beta hydrolase family
CLKPMBCM_01377 1.1e-144 epsV 2.7.8.12 S glycosyl transferase family 2
CLKPMBCM_01378 7.6e-156 ypuA S Protein of unknown function (DUF1002)
CLKPMBCM_01380 8e-137 rnhA 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CLKPMBCM_01381 2.5e-172 S Alpha/beta hydrolase of unknown function (DUF915)
CLKPMBCM_01382 8.1e-123 yugP S Putative neutral zinc metallopeptidase
CLKPMBCM_01383 1.2e-282 cls I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CLKPMBCM_01384 1.3e-79
CLKPMBCM_01385 6.5e-128 cobB K SIR2 family
CLKPMBCM_01386 1.3e-85 ogt 2.1.1.63 L 6-O-methylguanine DNA methyltransferase, DNA binding domain
CLKPMBCM_01387 1.5e-122 terC P Integral membrane protein TerC family
CLKPMBCM_01388 1.7e-60 yeaO S Protein of unknown function, DUF488
CLKPMBCM_01389 1e-31 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
CLKPMBCM_01390 5.6e-208 pepA E M42 glutamyl aminopeptidase
CLKPMBCM_01392 1.2e-109 ybbL S ABC transporter, ATP-binding protein
CLKPMBCM_01393 3.7e-129 ybbM S Uncharacterised protein family (UPF0014)
CLKPMBCM_01394 1.1e-201 psd 4.1.1.65 I Belongs to the phosphatidylserine decarboxylase family
CLKPMBCM_01395 0.0 lacA 3.2.1.23 G -beta-galactosidase
CLKPMBCM_01396 1e-23 dtpT U amino acid peptide transporter
CLKPMBCM_01397 1.7e-246 dtpT U amino acid peptide transporter
CLKPMBCM_01398 3.9e-128 pipD E Peptidase family C69
CLKPMBCM_01399 1.4e-56 pipD E Peptidase family C69
CLKPMBCM_01400 1.5e-217 naiP EGP Major facilitator Superfamily
CLKPMBCM_01401 1.3e-151 S Alpha beta hydrolase
CLKPMBCM_01402 3e-67 K Transcriptional regulator, MarR family
CLKPMBCM_01403 2e-295 XK27_09600 V ABC transporter, ATP-binding protein
CLKPMBCM_01404 0.0 V ABC transporter transmembrane region
CLKPMBCM_01405 8.7e-145 glnH ET ABC transporter
CLKPMBCM_01406 4e-133 glnQ 3.6.3.21 E ABC transporter, ATP-binding protein
CLKPMBCM_01407 3.1e-150 glnH ET ABC transporter
CLKPMBCM_01408 3.2e-110 gluC P ABC transporter permease
CLKPMBCM_01409 9.8e-107 glnP P ABC transporter permease
CLKPMBCM_01410 1.4e-63
CLKPMBCM_01411 1.6e-74 S Putative adhesin
CLKPMBCM_01413 8.1e-114 udk 2.7.1.48 F Cytidine monophosphokinase
CLKPMBCM_01414 2.2e-111 3.6.1.27 I Acid phosphatase homologues
CLKPMBCM_01415 0.0 leuS 6.1.1.4 J Belongs to the class-I aminoacyl-tRNA synthetase family
CLKPMBCM_01416 2.6e-297 ytgP S Polysaccharide biosynthesis protein
CLKPMBCM_01417 1.4e-106 MA20_36090 S Protein of unknown function (DUF2974)
CLKPMBCM_01418 1.3e-58 MA20_36090 S Protein of unknown function (DUF2974)
CLKPMBCM_01419 6.4e-134
CLKPMBCM_01420 2.5e-147 nnrD 4.2.1.136, 5.1.99.6 H Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CLKPMBCM_01421 9.2e-167 dacA 3.4.16.4 M Belongs to the peptidase S11 family
CLKPMBCM_01422 0.0 argS 6.1.1.19 J Arginyl-tRNA synthetase
CLKPMBCM_01423 5e-173 fba 4.1.2.13, 4.1.2.29 G Fructose-1,6-bisphosphate aldolase, class II
CLKPMBCM_01424 2.5e-44
CLKPMBCM_01425 2.1e-79 K Sigma-54 interaction domain
CLKPMBCM_01426 2.7e-53 K Sigma-54 interaction domain
CLKPMBCM_01428 2.8e-91 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
CLKPMBCM_01429 3.1e-124 yfeJ 6.3.5.2 F Glutamine amidotransferase class-I
CLKPMBCM_01430 1.3e-76 ylbE GM NAD(P)H-binding
CLKPMBCM_01431 4.7e-249 L transposase, IS605 OrfB family
CLKPMBCM_01432 2.9e-84 tlpA2 L Transposase IS200 like
CLKPMBCM_01433 5.7e-77 yebR 1.8.4.14 T GAF domain-containing protein
CLKPMBCM_01434 4.3e-201 yfeO P Voltage gated chloride channel
CLKPMBCM_01437 6.8e-22 K Helix-turn-helix domain
CLKPMBCM_01438 2.2e-20 XK27_07105 K Helix-turn-helix XRE-family like proteins
CLKPMBCM_01440 1.2e-105 K Phage antirepressor protein
CLKPMBCM_01443 5.1e-16
CLKPMBCM_01445 2.1e-12
CLKPMBCM_01446 1.2e-32
CLKPMBCM_01448 9.1e-134 S Protein of unknown function (DUF1071)
CLKPMBCM_01449 1.8e-146 S Conserved phage C-terminus (Phg_2220_C)
CLKPMBCM_01450 3.2e-18 K Transcriptional regulator
CLKPMBCM_01451 1.3e-57 S sequence-specific DNA binding
CLKPMBCM_01456 1.8e-75 rusA 3.1.22.4 L Endodeoxyribonuclease RusA
CLKPMBCM_01457 7.6e-42
CLKPMBCM_01460 1.5e-07
CLKPMBCM_01463 1.8e-82 S Terminase small subunit
CLKPMBCM_01464 1.7e-224 S DNA packaging
CLKPMBCM_01465 2.6e-253 S Phage portal protein, SPP1 Gp6-like
CLKPMBCM_01466 2.5e-180 S Phage Mu protein F like protein
CLKPMBCM_01467 4.4e-76 S Phage minor structural protein GP20
CLKPMBCM_01468 1.5e-184
CLKPMBCM_01469 3.1e-63 S Phage gp6-like head-tail connector protein
CLKPMBCM_01470 1.7e-60
CLKPMBCM_01471 1.2e-239 pyrP F Permease
CLKPMBCM_01472 4.1e-19 K Transcriptional regulator
CLKPMBCM_01473 6.7e-126 3.1.3.102, 3.1.3.104 S Sucrose-6F-phosphate phosphohydrolase
CLKPMBCM_01474 4.9e-22 S PFAM Archaeal ATPase
CLKPMBCM_01475 2.8e-54 S PFAM Archaeal ATPase
CLKPMBCM_01476 5.2e-22 S PFAM Archaeal ATPase
CLKPMBCM_01477 1.5e-85 2.3.1.128 K acetyltransferase
CLKPMBCM_01478 1.8e-16
CLKPMBCM_01480 4.2e-220 ybfG M peptidoglycan-binding domain-containing protein
CLKPMBCM_01481 7.7e-230 L COG3547 Transposase and inactivated derivatives
CLKPMBCM_01482 4.8e-255 emrY EGP Major facilitator Superfamily
CLKPMBCM_01483 1.6e-250 emrY EGP Major facilitator Superfamily
CLKPMBCM_01484 1.8e-141 glpF U Belongs to the MIP aquaporin (TC 1.A.8) family
CLKPMBCM_01485 2.1e-135 S CAAX amino terminal protease
CLKPMBCM_01486 9.3e-159 mleP3 S Membrane transport protein
CLKPMBCM_01487 2.1e-97 tag 3.2.2.20 L glycosylase
CLKPMBCM_01488 2.7e-188 S Bacteriocin helveticin-J
CLKPMBCM_01489 1.6e-205 dnaN 2.7.7.7 L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria
CLKPMBCM_01490 4.5e-208 recF L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CLKPMBCM_01491 0.0 gyrB 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CLKPMBCM_01492 0.0 gyrA 5.99.1.3 L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CLKPMBCM_01493 9.4e-49 rpsF J Binds together with S18 to 16S ribosomal RNA
CLKPMBCM_01494 7.3e-81 ssb L Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism
CLKPMBCM_01495 2.1e-35 rpsR J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CLKPMBCM_01496 2.9e-157 corA P CorA-like Mg2+ transporter protein
CLKPMBCM_01497 0.0 yybT T signaling protein consisting of a modified GGDEF domain and a DHH domain
CLKPMBCM_01498 4.8e-76 rplI J Binds to the 23S rRNA
CLKPMBCM_01499 1.6e-244 dnaB 3.6.4.12 L Participates in initiation and elongation during chromosome replication
CLKPMBCM_01500 6.5e-170 scrK 2.7.1.2, 2.7.1.4 GK ROK family
CLKPMBCM_01501 7.2e-214 I Protein of unknown function (DUF2974)
CLKPMBCM_01502 0.0
CLKPMBCM_01503 1.4e-94 K LysR substrate binding domain
CLKPMBCM_01504 3.2e-177 lacX 5.1.3.3 G Aldose 1-epimerase
CLKPMBCM_01505 2.4e-251 hslU O this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
CLKPMBCM_01506 4.3e-89 hslV 3.4.25.2 O Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
CLKPMBCM_01507 2.6e-169 xerC D Phage integrase, N-terminal SAM-like domain
CLKPMBCM_01508 6.7e-248 trmFO 2.1.1.74 J Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
CLKPMBCM_01509 0.0 topA 5.99.1.2 L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CLKPMBCM_01510 1.2e-152 dprA LU DNA protecting protein DprA
CLKPMBCM_01511 8.3e-134 rnhB 3.1.26.4 L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
CLKPMBCM_01512 4.6e-157 ylqF S Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
CLKPMBCM_01513 9e-262 ctpA 3.4.21.102 M Belongs to the peptidase S41A family
CLKPMBCM_01514 1.6e-35 yozE S Belongs to the UPF0346 family
CLKPMBCM_01515 3.3e-147 DegV S Uncharacterised protein, DegV family COG1307
CLKPMBCM_01516 5.8e-115 hlyIII S protein, hemolysin III
CLKPMBCM_01517 3.9e-226 cca 2.7.7.19, 2.7.7.72 J Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate
CLKPMBCM_01518 1.9e-161 ypjC S Uncharacterised 5xTM membrane BCR, YitT family COG1284
CLKPMBCM_01519 3.2e-63 2.5.1.74 H UbiA prenyltransferase family
CLKPMBCM_01520 3.9e-70 mrr L restriction endonuclease
CLKPMBCM_01521 1.9e-61 S Putative adhesin
CLKPMBCM_01522 8.1e-38 adh 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
CLKPMBCM_01523 6.4e-90 S Peptidase propeptide and YPEB domain
CLKPMBCM_01524 1e-51 T Transcriptional regulatory protein, C terminal
CLKPMBCM_01525 5.9e-117 3.6.1.55 F NUDIX domain
CLKPMBCM_01526 8.1e-108 yihX 3.1.3.10, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
CLKPMBCM_01527 2.2e-31 S reductase
CLKPMBCM_01528 3.1e-130 budA 4.1.1.5 Q Alpha-acetolactate decarboxylase
CLKPMBCM_01529 0.0 alsS 2.2.1.6 EH Belongs to the TPP enzyme family
CLKPMBCM_01530 1.7e-81 XK26_02160 S Pyridoxamine 5'-phosphate oxidase
CLKPMBCM_01531 2.1e-277 lsa S ABC transporter
CLKPMBCM_01532 1.6e-117 S Alpha beta hydrolase
CLKPMBCM_01533 2.6e-31 S Uncharacterized protein conserved in bacteria (DUF2255)
CLKPMBCM_01534 5.1e-190 1.1.1.1, 1.1.1.14 E alcohol dehydrogenase
CLKPMBCM_01535 2.6e-59 K Transcriptional regulator
CLKPMBCM_01537 1.2e-68 K LytTr DNA-binding domain
CLKPMBCM_01538 8e-62 S Protein of unknown function (DUF3021)
CLKPMBCM_01539 2e-178 MA20_14895 S Conserved hypothetical protein 698
CLKPMBCM_01540 5.5e-72
CLKPMBCM_01542 3.4e-100 S LexA-binding, inner membrane-associated putative hydrolase
CLKPMBCM_01543 6.3e-34 S Domain of unknown function (DUF4355)
CLKPMBCM_01545 3.9e-92
CLKPMBCM_01546 1.8e-169 S Phage portal protein, SPP1 Gp6-like
CLKPMBCM_01547 1.1e-183 S Terminase-like family
CLKPMBCM_01548 1.5e-112 xtmA L Terminase small subunit
CLKPMBCM_01551 2.1e-13
CLKPMBCM_01552 7.9e-11
CLKPMBCM_01555 1.1e-21
CLKPMBCM_01556 1.3e-41
CLKPMBCM_01561 3.3e-07
CLKPMBCM_01562 3e-57 S Pfam:DUF5406
CLKPMBCM_01567 6.8e-13 K transcriptional
CLKPMBCM_01568 7.7e-61 S IstB-like ATP binding protein
CLKPMBCM_01569 5.1e-46 S calcium ion binding
CLKPMBCM_01570 1.5e-22 S ERF superfamily
CLKPMBCM_01571 1.7e-34 S Siphovirus Gp157
CLKPMBCM_01572 2.6e-26
CLKPMBCM_01573 1.7e-13
CLKPMBCM_01575 2.6e-129 K response regulator
CLKPMBCM_01576 0.0 vicK 2.7.13.3 T Histidine kinase
CLKPMBCM_01577 1.5e-242 yycH S YycH protein
CLKPMBCM_01578 6.3e-143 yycI S YycH protein
CLKPMBCM_01579 1.4e-147 vicX 3.1.26.11 S domain protein
CLKPMBCM_01580 2.1e-174 htrA 3.4.21.107 O serine protease
CLKPMBCM_01581 1.8e-81 rlmH 2.1.1.177 J Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
CLKPMBCM_01582 4.4e-107 P Cobalt transport protein
CLKPMBCM_01583 5.5e-245 cbiO1 S ABC transporter, ATP-binding protein
CLKPMBCM_01584 3.9e-96 S ABC-type cobalt transport system, permease component
CLKPMBCM_01585 1.3e-160 K helix_turn_helix, arabinose operon control protein
CLKPMBCM_01587 4.8e-43 S CAAX protease self-immunity
CLKPMBCM_01588 6.5e-162 htpX O Belongs to the peptidase M48B family
CLKPMBCM_01589 1.3e-88 lemA S LemA family
CLKPMBCM_01590 4.8e-42 S Phage tail-collar fibre protein
CLKPMBCM_01591 4.2e-31
CLKPMBCM_01592 2e-115 Z012_12235 S Baseplate J-like protein
CLKPMBCM_01594 3.1e-25
CLKPMBCM_01595 3.2e-89
CLKPMBCM_01596 3.6e-36
CLKPMBCM_01597 1.7e-54 3.5.1.28 M LysM domain
CLKPMBCM_01598 4.2e-29
CLKPMBCM_01600 6.1e-12
CLKPMBCM_01601 1.5e-36
CLKPMBCM_01602 5e-103 Z012_02110 S Protein of unknown function (DUF3383)
CLKPMBCM_01603 9.8e-24
CLKPMBCM_01605 2.8e-49 Z012_02125
CLKPMBCM_01606 2.3e-30
CLKPMBCM_01607 3.1e-14
CLKPMBCM_01608 2.8e-154 metQ1 P Belongs to the nlpA lipoprotein family
CLKPMBCM_01609 1.4e-184 metN P Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CLKPMBCM_01610 1.8e-66 metI P ABC transporter permease
CLKPMBCM_01611 5e-265 fumC 4.2.1.2 C Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate
CLKPMBCM_01612 1.7e-257 frdC 1.3.5.4 C FAD binding domain
CLKPMBCM_01613 3.1e-167 ldh 1.1.1.27 C Belongs to the LDH MDH superfamily. LDH family
CLKPMBCM_01614 1.2e-244 yjjP S Putative threonine/serine exporter
CLKPMBCM_01615 2.1e-188 ansA 3.5.1.1 EJ L-asparaginase, type I
CLKPMBCM_01616 0.0 aha1 P E1-E2 ATPase
CLKPMBCM_01617 9.1e-306 S Bacterial membrane protein, YfhO
CLKPMBCM_01618 1.7e-51 S Enterocin A Immunity
CLKPMBCM_01619 6.5e-137 glcR K DeoR C terminal sensor domain
CLKPMBCM_01620 1e-22 yceE Q phosphatase activity
CLKPMBCM_01621 3.8e-12 yceE S haloacid dehalogenase-like hydrolase
CLKPMBCM_01622 0.0 xfp 4.1.2.22, 4.1.2.9 G Phosphoketolase
CLKPMBCM_01623 1.8e-116 C nitroreductase
CLKPMBCM_01624 6.3e-128
CLKPMBCM_01625 1.1e-237 yhdP S Transporter associated domain
CLKPMBCM_01626 3.4e-103 hpt 2.4.2.8 F Belongs to the purine pyrimidine phosphoribosyltransferase family
CLKPMBCM_01627 3.7e-230 potE E amino acid
CLKPMBCM_01628 4.2e-135 M Glycosyl hydrolases family 25
CLKPMBCM_01629 2.5e-204 yfmL 3.6.4.13 L DEAD DEAH box helicase
CLKPMBCM_01630 2.1e-249 celB G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CLKPMBCM_01632 1.9e-61
CLKPMBCM_01633 4.3e-281 V ABC-type multidrug transport system, ATPase and permease components
CLKPMBCM_01634 1.3e-181 P ABC transporter
CLKPMBCM_01635 6.2e-133 qmcA O prohibitin homologues
CLKPMBCM_01636 1e-199 glxK 2.7.1.165 G Belongs to the glycerate kinase type-1 family
CLKPMBCM_01637 4.9e-28 S SnoaL-like domain
CLKPMBCM_01638 3.2e-53 drgA C nitroreductase
CLKPMBCM_01639 1.5e-10 drgA C nitroreductase
CLKPMBCM_01640 0.0 pepO 3.4.24.71 O Peptidase family M13
CLKPMBCM_01641 6.8e-41 M Belongs to the glycosyl hydrolase 28 family
CLKPMBCM_01643 3.8e-114 XK27_06780 V ABC transporter permease
CLKPMBCM_01644 4.4e-169 S Alpha/beta hydrolase of unknown function (DUF915)
CLKPMBCM_01645 1.6e-225 pts13C G The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane
CLKPMBCM_01646 7.8e-38
CLKPMBCM_01647 6.9e-215 lmrP E Major Facilitator Superfamily
CLKPMBCM_01648 1.2e-138 pbpX2 V Beta-lactamase
CLKPMBCM_01649 3.8e-251 dltD M Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
CLKPMBCM_01650 3.3e-36 dltC 6.1.1.13 J Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC-carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CLKPMBCM_01651 2.3e-234 dltB M MBOAT, membrane-bound O-acyltransferase family
CLKPMBCM_01652 1.7e-287 dltA 6.1.1.13 H Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D-alanyl carrier protein (Dcp) DltC. In an ATP- dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall
CLKPMBCM_01654 6.6e-39
CLKPMBCM_01655 2.9e-202 ywhK S Membrane
CLKPMBCM_01656 6.1e-26 KLT Protein kinase domain
CLKPMBCM_01658 0.0 scrA 2.7.1.199, 2.7.1.208, 2.7.1.211, 5.3.1.1 G phosphotransferase system
CLKPMBCM_01659 7.4e-296 scrB 3.2.1.26 GH32 G invertase
CLKPMBCM_01660 3e-184 scrR K Transcriptional regulator, LacI family
CLKPMBCM_01661 3.8e-142 ptp2 3.1.3.48 T Tyrosine phosphatase family
CLKPMBCM_01662 1.7e-145 thiD 2.5.1.3, 2.7.1.49, 2.7.4.7, 4.1.99.17 H Phosphomethylpyrimidine kinase
CLKPMBCM_01663 7.8e-131 cobQ S glutamine amidotransferase
CLKPMBCM_01664 2.4e-256 yfnA E Amino Acid
CLKPMBCM_01665 1.4e-159 EG EamA-like transporter family
CLKPMBCM_01666 0.0 pepO 3.4.24.71 O Peptidase family M13
CLKPMBCM_01667 1e-135 ropB K Helix-turn-helix XRE-family like proteins
CLKPMBCM_01668 4.7e-198 XK27_02480 EGP Major facilitator Superfamily
CLKPMBCM_01670 4.2e-40 S Transglycosylase associated protein
CLKPMBCM_01671 2.9e-156 xth 3.1.11.2 L exodeoxyribonuclease III
CLKPMBCM_01672 0.0 L Helicase C-terminal domain protein
CLKPMBCM_01673 9.1e-140 S Alpha beta hydrolase
CLKPMBCM_01674 8.3e-27
CLKPMBCM_01675 1.7e-169 K AI-2E family transporter
CLKPMBCM_01676 3.2e-133 E GDSL-like Lipase/Acylhydrolase family
CLKPMBCM_01677 1.4e-77 msrB 1.8.4.11, 1.8.4.12 O peptide methionine sulfoxide reductase
CLKPMBCM_01678 2.4e-220 patA 2.6.1.1 E Aminotransferase
CLKPMBCM_01679 0.0 aspS 6.1.1.12 J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp)
CLKPMBCM_01680 3.1e-245 hisS 6.1.1.21 J histidyl-tRNA synthetase
CLKPMBCM_01681 1.3e-73 dtd J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality
CLKPMBCM_01682 0.0 relA 2.7.6.5 KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CLKPMBCM_01683 3e-63
CLKPMBCM_01684 6.9e-170 prmA J Ribosomal protein L11 methyltransferase
CLKPMBCM_01685 3.4e-67 ybaK S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CLKPMBCM_01686 1.5e-179 ybiR P Citrate transporter
CLKPMBCM_01687 1e-64 S Iron-sulphur cluster biosynthesis
CLKPMBCM_01688 1.7e-16
CLKPMBCM_01689 2.3e-119
CLKPMBCM_01691 1.8e-240 ydaM M Glycosyl transferase
CLKPMBCM_01692 1.7e-114 G Glycosyl hydrolases family 8
CLKPMBCM_01693 4.2e-30 G Glycosyl hydrolases family 8
CLKPMBCM_01694 4.5e-120 yfbR S HD containing hydrolase-like enzyme
CLKPMBCM_01695 3.5e-174 L HNH nucleases
CLKPMBCM_01696 1.2e-09
CLKPMBCM_01697 1.4e-136 glnQ E ABC transporter, ATP-binding protein
CLKPMBCM_01698 3.4e-294 glnP P ABC transporter permease
CLKPMBCM_01699 5.6e-49 mpg 3.2.2.21 L Belongs to the DNA glycosylase MPG family
CLKPMBCM_01700 8.8e-60 dam 2.1.1.72 H Site-specific DNA-methyltransferase (adenine-specific)
CLKPMBCM_01701 2.1e-129 3.4.16.4, 3.5.2.6 V Beta-lactamase enzyme family
CLKPMBCM_01702 0.0 glpQ 3.1.4.46 C Membrane domain of glycerophosphoryl diester phosphodiesterase
CLKPMBCM_01703 1.4e-156 O protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CLKPMBCM_01704 2.5e-124
CLKPMBCM_01705 4.2e-51
CLKPMBCM_01706 1.5e-138 S Belongs to the UPF0246 family
CLKPMBCM_01707 4e-136 aroD S Alpha/beta hydrolase family
CLKPMBCM_01708 1.8e-113 G Phosphoglycerate mutase family
CLKPMBCM_01709 5.6e-109 G phosphoglycerate mutase
CLKPMBCM_01710 9e-87 ygfC K Bacterial regulatory proteins, tetR family
CLKPMBCM_01711 2.2e-177 hrtB V ABC transporter permease
CLKPMBCM_01712 1.8e-251 rumA 2.1.1.190 J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
CLKPMBCM_01713 1.1e-119 spaE S ABC-2 family transporter protein
CLKPMBCM_01714 4.1e-127 mutF V ABC transporter, ATP-binding protein
CLKPMBCM_01715 6.6e-230 nhaC C Na H antiporter NhaC
CLKPMBCM_01716 2.4e-141 salL 2.5.1.63, 2.5.1.94 K S-adenosyl-l-methionine hydroxide adenosyltransferase
CLKPMBCM_01717 4.8e-94 S UPF0397 protein
CLKPMBCM_01718 0.0 ykoD P ABC transporter, ATP-binding protein
CLKPMBCM_01719 2e-141 cbiQ P cobalt transport
CLKPMBCM_01720 1.8e-117 ybhL S Belongs to the BI1 family
CLKPMBCM_01721 3.5e-112 GT2,GT4 M family 8
CLKPMBCM_01722 5.3e-127 L restriction endonuclease
CLKPMBCM_01723 2.1e-269 1.3.5.4 C FMN_bind
CLKPMBCM_01724 0.0 L Helicase C-terminal domain protein
CLKPMBCM_01725 3e-56 nudG 3.6.1.55, 3.6.1.65 L NUDIX domain
CLKPMBCM_01726 0.0 hsdR 3.1.21.3 V EcoEI R protein C-terminal
CLKPMBCM_01727 8.5e-233 steT_1 E amino acid
CLKPMBCM_01728 3.8e-136 puuD S peptidase C26
CLKPMBCM_01729 2.5e-229 yifK E Amino acid permease
CLKPMBCM_01730 7.4e-253 yifK E Amino acid permease
CLKPMBCM_01731 1.1e-64 manO S Domain of unknown function (DUF956)
CLKPMBCM_01732 3.4e-169 manN G system, mannose fructose sorbose family IID component
CLKPMBCM_01733 3.7e-124 manY G PTS system
CLKPMBCM_01734 3.4e-183 manL 2.7.1.191 G PTS system sorbose subfamily IIB component
CLKPMBCM_01736 4.4e-33 3.4.24.25, 3.4.24.26 UW LPXTG-motif cell wall anchor domain protein
CLKPMBCM_01737 3.6e-28
CLKPMBCM_01738 5.6e-12
CLKPMBCM_01750 2.4e-217 mgs 2.4.1.337 GT4 M Glycosyl transferase 4-like domain
CLKPMBCM_01751 2.8e-196 cpoA GT4 M Glycosyltransferase, group 1 family protein
CLKPMBCM_01752 6.5e-182 mprF S Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
CLKPMBCM_01753 0.0 ltaS 2.7.8.20 M Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
CLKPMBCM_01755 1.5e-42
CLKPMBCM_01756 2e-26
CLKPMBCM_01757 7.1e-86 2.3.1.57 K Acetyltransferase (GNAT) family
CLKPMBCM_01758 2.8e-86 rimL J Acetyltransferase (GNAT) domain
CLKPMBCM_01759 8.5e-108 aroD S Serine hydrolase (FSH1)
CLKPMBCM_01760 4.2e-250 I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CLKPMBCM_01761 1.4e-118 3.1.3.48 T Tyrosine phosphatase family
CLKPMBCM_01762 3.2e-59
CLKPMBCM_01763 4.5e-255 dnaA L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
CLKPMBCM_01764 1.1e-15 rpmH J Belongs to the bacterial ribosomal protein bL34 family
CLKPMBCM_01765 3.5e-61 rnpA 3.1.26.5 J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
CLKPMBCM_01766 1.6e-149 yidC U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins
CLKPMBCM_01767 1.2e-250 mnmE S Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
CLKPMBCM_01768 0.0 gidA D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
CLKPMBCM_01769 5.9e-43 ykuL S (CBS) domain
CLKPMBCM_01770 0.0 cadA P P-type ATPase
CLKPMBCM_01771 4.8e-197 napA P Sodium/hydrogen exchanger family
CLKPMBCM_01773 5.9e-267 V ABC transporter transmembrane region
CLKPMBCM_01774 3e-156 mutR K Helix-turn-helix XRE-family like proteins
CLKPMBCM_01775 1.1e-256 gabD 1.2.1.16, 1.2.1.20, 1.2.1.79 C Belongs to the aldehyde dehydrogenase family
CLKPMBCM_01776 1.4e-153 hipB K Helix-turn-helix
CLKPMBCM_01777 6.6e-153 I alpha/beta hydrolase fold
CLKPMBCM_01778 5.3e-107 yjbF S SNARE associated Golgi protein
CLKPMBCM_01779 2.3e-101 J Acetyltransferase (GNAT) domain
CLKPMBCM_01780 1.6e-217 serS 6.1.1.11 J Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
CLKPMBCM_01781 3.3e-115 csd2 L CRISPR-associated protein Cas7
CLKPMBCM_01782 6e-139 csd1 3.5.1.28 M CRISPR-associated protein (Cas_Csd1)
CLKPMBCM_01783 6.5e-107 cas5d S CRISPR-associated protein (Cas_Cas5)
CLKPMBCM_01784 2.5e-141 cas3 L Type III restriction enzyme, res subunit
CLKPMBCM_01785 3.2e-32 GK ROK family
CLKPMBCM_01786 3.5e-199 V MatE
CLKPMBCM_01787 3.3e-242 yisQ V MatE
CLKPMBCM_01788 1.4e-137 L An automated process has identified a potential problem with this gene model
CLKPMBCM_01791 2.2e-66
CLKPMBCM_01792 1.3e-78 mutT 3.6.1.55 F NUDIX domain
CLKPMBCM_01793 4.4e-35
CLKPMBCM_01794 9.4e-68
CLKPMBCM_01795 1.1e-65 S Domain of unknown function DUF1828
CLKPMBCM_01796 1.7e-95 tnpR1 L Resolvase, N terminal domain
CLKPMBCM_01799 3.2e-39
CLKPMBCM_01800 1.5e-288 gltX 6.1.1.17, 6.1.1.24 J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
CLKPMBCM_01801 3.9e-254 radA O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CLKPMBCM_01802 3.3e-103 dut 3.6.1.23, 4.1.1.36, 6.3.2.5 F dUTP diphosphatase
CLKPMBCM_01803 9.2e-22 brpA K Cell envelope-like function transcriptional attenuator common domain protein
CLKPMBCM_01804 3e-145 brpA K Cell envelope-like function transcriptional attenuator common domain protein
CLKPMBCM_01805 9.2e-135 yjjG 3.1.3.102, 3.1.3.104, 3.1.3.5, 3.8.1.2 S Haloacid dehalogenase-like hydrolase
CLKPMBCM_01806 1.2e-152 yitS S EDD domain protein, DegV family
CLKPMBCM_01807 3.5e-17
CLKPMBCM_01808 0.0 tetP J elongation factor G
CLKPMBCM_01809 2.4e-37 devA 3.6.3.25 V ABC transporter, ATP-binding protein
CLKPMBCM_01810 8.7e-156 K CAT RNA binding domain
CLKPMBCM_01811 0.0 2.7.1.199, 2.7.1.208, 2.7.1.211 G phosphotransferase system
CLKPMBCM_01812 3.8e-152 V Abi-like protein
CLKPMBCM_01813 8.4e-78 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
CLKPMBCM_01814 7.7e-91 rfbD 1.1.1.133, 5.1.3.13 M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose
CLKPMBCM_01815 7.5e-117 rfbC 5.1.3.13 M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose
CLKPMBCM_01816 0.0 clpE2 O AAA domain (Cdc48 subfamily)
CLKPMBCM_01817 1.5e-250 yfnA E Amino Acid
CLKPMBCM_01820 4.7e-105 K Phage antirepressor protein
CLKPMBCM_01821 1.5e-29 K Helix-turn-helix XRE-family like proteins
CLKPMBCM_01822 4.3e-56 ansR 3.4.21.88 K Cro/C1-type HTH DNA-binding domain
CLKPMBCM_01823 8.9e-77 S Pfam:Peptidase_M78
CLKPMBCM_01824 5e-26 S Domain of unknown function (DUF4393)
CLKPMBCM_01826 6.2e-63 S Initiator Replication protein
CLKPMBCM_01828 4.7e-10
CLKPMBCM_01832 5.4e-98 L Transposase
CLKPMBCM_01833 1.7e-33
CLKPMBCM_01835 6.7e-99 L Helix-turn-helix domain of Hin and related proteins, a family of DNA-binding domains unique to bacteria and represented by the Hin protein of Salmonella. The basic HTH domain is a simple fold comprised of three core helices that form a right-handed
CLKPMBCM_01836 7.4e-256 qacA EGP Major facilitator Superfamily
CLKPMBCM_01837 1.9e-212 metK 2.5.1.6 H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
CLKPMBCM_01841 1.3e-45 yagE E amino acid
CLKPMBCM_01842 2.2e-216 mdtG EGP Major facilitator Superfamily
CLKPMBCM_01843 6.4e-31
CLKPMBCM_01844 2.3e-69 K helix_turn_helix multiple antibiotic resistance protein
CLKPMBCM_01845 2.5e-77
CLKPMBCM_01846 6.6e-74 S Domain of unknown function (DUF4767)
CLKPMBCM_01847 6.8e-56 frnE Q DSBA-like thioredoxin domain
CLKPMBCM_01848 9.2e-17 frnE Q DSBA-like thioredoxin domain
CLKPMBCM_01849 3.2e-76
CLKPMBCM_01850 4.1e-86 ptpA 3.1.3.48 T Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CLKPMBCM_01851 1.5e-225 L COG3547 Transposase and inactivated derivatives
CLKPMBCM_01852 4.7e-65 L Transposase
CLKPMBCM_01853 8.6e-170 S N-acetylmuramoyl-L-alanine amidase activity
CLKPMBCM_01854 5.1e-24 S Bacteriophage holin of superfamily 6 (Holin_LLH)
CLKPMBCM_01856 1.7e-34

eggNOG-mapper v2 (Database: eggNOG v5.0, Jul. 2018 release)